Citrus Sinensis ID: 020768

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-
Protein Sequence
MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFLIVLGYSVI
Secondary Structure (PSIPRED)
ccccccccccccccccccEEEEEEEcccEEEEEEcccccccccEEEEEEEEEEEccccccccccccccccccccEEccccccEEEEEEcccccccccccEEEEcccccccccHHccccccccccccEEEEccccccccccEEEEccccEEEcccccccccHHHHHHHHHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHHccccEEEEEccccHHHHHHHHccccEEEEcccccccHHHHHHHHHHHccccccEEEEccccHHHHHHHHHHHccccEEEEEccccccccccHHHHHccccEEEEEEccccHHcHHccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccEEEEEEEccEEEEEEcccccccccEEEEEEEEEEEcHHHHHHHHHcEccccEccccEEcccEEEEEEEEEcccccccccccEEEEccEEcccccHHHHcccHHHccccEEccEccEccccEcEEEEEHHHEEEccccccHHHHHcHHHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHccccEEEEcccccccHHHHHHHHHHHccccccEEEEccccHHHHHHHHHHcccccEEEEcccccccccccHHHHHccccEEEEccccEccccccccc
Coil and Loop (DISEMBL)
mgkggmsqgekedgeEVNMAAWLLGVntlkiqpfelpslgpydVLVRMKAVGicgsdvhylktlrcadfvvkepmvigHECAGVIEKVgsevktlvpgdrvalepgiscwrcdhckggrynlcpemkffatppvhgslanqvvhpadlcfklpdnvsleegamceplsvglhacrranigpetnvlimgagPIGLVTMLGarafgaprivivdvdDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGtgidvsfdcagfnKTMSTALSAtraggkvclvgmghlemtvpltPAAARYLIYSFLFHFFLIVLGYSVI
Flexible Loop (DISEMBL)
mgkggmsqgekedGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVgsevktlvpgdrvalepgiscwrcdHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAkelgadnivkvSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFLIVLGYSVI
Low Complexity Region (SEG)
MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFLIVLGYSVI
Disordered region (IsUnstruct)
*****************NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFLIVLGYS**
Disordered Region (DISOPRED)
********************AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFLIVLGYSVI
Disordered Region (DISEMBL)
**************EEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFLIVLGYSVI
Disordered Region (DISPRO)
*************GEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFLIVLG****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHi
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNxxxxxxxxxxxxxxxxxxxxxMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFLIVLGYSVI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	321	2.2.26 [Sep-21-2011]
Q1PSI9	366	L-idonate 5-dehydrogenase	no	no	0.965	0.846	0.767	1e-141
Q58D31	356	Sorbitol dehydrogenase OS	yes	no	0.906	0.817	0.471	2e-71
P27867	357	Sorbitol dehydrogenase OS	yes	no	0.906	0.815	0.464	3e-71
Q00796	357	Sorbitol dehydrogenase OS	yes	no	0.906	0.815	0.474	3e-71
Q4R639	357	Sorbitol dehydrogenase OS	N/A	no	0.906	0.815	0.467	9e-71
Q64442	357	Sorbitol dehydrogenase OS	yes	no	0.906	0.815	0.461	9e-71
Q5R5F3	357	Sorbitol dehydrogenase OS	yes	no	0.906	0.815	0.471	2e-70
P07846	354	Sorbitol dehydrogenase OS	N/A	no	0.903	0.819	0.464	2e-69
A1D9C9	358	Probable D-xylulose reduc	N/A	no	0.912	0.818	0.442	3e-66
Q4WAU7	358	Probable D-xylulose reduc	yes	no	0.912	0.818	0.439	5e-65

>sp|Q1PSI9|IDND_VITVI L-idonate 5-dehydrogenase OS=Vitis vinifera GN=VIT_16s0100g00290 PE=1 SV=2

 Score =  501 bits (1290), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 241/314 (76%), Positives = 276/314 (87%), Gaps = 4/314 (1%)

Query: 1   MGKGGMSQGE---KEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSD 57
           MGKGG S+     KE GEE NMAAWLLG+ TLKIQP+ LPSLGPYDV VR+KAVGICGSD
Sbjct: 1   MGKGGNSEDAVSGKEHGEE-NMAAWLLGIKTLKIQPYILPSLGPYDVKVRIKAVGICGSD 59

Query: 58  VHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKG 117
           VH+ KT+RCA+F+VK+PMVIGHECAG+IE+VGSEVK LV GDRVALEPGISC RC  C+ 
Sbjct: 60  VHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKNLVAGDRVALEPGISCNRCSLCRN 119

Query: 118 GRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA 177
           G+YNLC EMKFF +PP +GSLANQVVHP++LCFKLPDNVSLEEGAMCEPLSVG+HACRRA
Sbjct: 120 GQYNLCREMKFFGSPPTNGSLANQVVHPSNLCFKLPDNVSLEEGAMCEPLSVGIHACRRA 179

Query: 178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL 237
           N+GPETNVLIMG+GPIGLVTML ARAFGAPRIV+VDVDD RL++AK+LGAD+I++VSTN+
Sbjct: 180 NVGPETNVLIMGSGPIGLVTMLAARAFGAPRIVLVDVDDQRLAIAKDLGADDIIRVSTNI 239

Query: 238 QDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTP 297
           QD+ EEV KIQ  M TG+DVSFDC GFNKTMSTAL+ATRAGGKVCLVG+   EMTVPLTP
Sbjct: 240 QDLDEEVAKIQSTMVTGVDVSFDCVGFNKTMSTALNATRAGGKVCLVGLAQSEMTVPLTP 299

Query: 298 AAARYLIYSFLFHF 311
           AAAR +    +F +
Sbjct: 300 AAAREVDIVGIFRY 313

Involved in the catabolism of ascorbate to tartrate. The enzyme has no activity with NADP(+).
Vitis vinifera (taxid: 29760)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: nEC: 8

>sp|Q58D31|DHSO_BOVIN Sorbitol dehydrogenase OS=Bos taurus GN=SORD PE=2 SV=3

 Score =  269 bits (688), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 139/295 (47%), Positives = 199/295 (67%), Gaps = 4/295 (1%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL++M +VGICGSDVHY +  R  DFVVK+PMV+
Sbjct: 8   NLSLVVHGPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKKPMVL 67

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G + KVGS V+ L PGDRVA+EPG      + CK GRYNL P + F ATPP  G+
Sbjct: 68  GHEASGTVVKVGSLVRHLQPGDRVAIEPGAPRETDEFCKIGRYNLSPTIFFCATPPDDGN 127

Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
           L     H A+ C+KLPDNV+ EEGA+ EPLSVG+HACRRA +     VL+ GAGPIGLV+
Sbjct: 128 LCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIGLVS 187

Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGID 256
           +L A+A GA ++V+ D+   RLS AKE+GAD I+++S  + Q+IA++VE +   +G+  +
Sbjct: 188 LLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILQISNESPQEIAKKVEGL---LGSKPE 244

Query: 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF 311
           V+ +C G   ++   + AT +GG + LVG+G    +VPL  AA R +    +F +
Sbjct: 245 VTIECTGVETSIQAGIYATHSGGTLVLVGLGSEMTSVPLVHAATREVDIKGVFRY 299

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|P27867|DHSO_RAT Sorbitol dehydrogenase OS=Rattus norvegicus GN=Sord PE=1 SV=4

 Score =  268 bits (686), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 137/295 (46%), Positives = 199/295 (67%), Gaps = 4/295 (1%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   ++++ + +P LGP DVL++M +VGICGSDVHY +  R  DFVVK+PMV+
Sbjct: 9   NLSLVVHGPGDIRLENYPIPELGPNDVLLKMHSVGICGSDVHYWEHGRIGDFVVKKPMVL 68

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE AG + KVG  VK L PGDRVA+EPG+     + CK GRYNL P + F ATPP  G+
Sbjct: 69  GHEAAGTVTKVGPMVKHLKPGDRVAIEPGVPREIDEFCKIGRYNLTPSIFFCATPPDDGN 128

Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
           L     H AD C+KLPD+V+ EEGA+ EPLSVG++ACRR ++     VL+ GAGPIG+VT
Sbjct: 129 LCRFYKHSADFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCGAGPIGIVT 188

Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL-QDIAEEVEKIQKAMGTGID 256
           +L A+A GA ++V++D+   RL+ AKE+GAD  ++V+     DIA++VE +   +G+  +
Sbjct: 189 LLVAKAMGASQVVVIDLSASRLAKAKEVGADFTIQVAKETPHDIAKKVESV---LGSKPE 245

Query: 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF 311
           V+ +C G   ++ T + AT +GG + +VGMG   + +PL  AA R +    +F +
Sbjct: 246 VTIECTGAESSVQTGIYATHSGGTLVVVGMGPEMINLPLVHAAVREVDIKGVFRY 300

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q00796|DHSO_HUMAN Sorbitol dehydrogenase OS=Homo sapiens GN=SORD PE=1 SV=4

 Score =  268 bits (686), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 140/295 (47%), Positives = 196/295 (66%), Gaps = 4/295 (1%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL+RM +VGICGSDVHY +  R  +F+VK+PMV+
Sbjct: 9   NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVL 68

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G +EKVGS VK L PGDRVA+EPG      + CK GRYNL P + F ATPP  G+
Sbjct: 69  GHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGN 128

Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
           L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ GAGPIG+VT
Sbjct: 129 LCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVT 188

Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGID 256
           +L A+A GA ++V+ D+   RLS AKE+GAD ++++S  + Q+IA +VE     +G   +
Sbjct: 189 LLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVE---GQLGCKPE 245

Query: 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF 311
           V+ +C G   ++   + ATR+GG + LVG+G    TVPL  AA R +    +F +
Sbjct: 246 VTIECTGAEASIQAGIYATRSGGNLVLVGLGSEMTTVPLLHAAIREVDIKGVFRY 300

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q4R639|DHSO_MACFA Sorbitol dehydrogenase OS=Macaca fascicularis GN=SORD PE=2 SV=3

 Score =  267 bits (682), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 138/295 (46%), Positives = 198/295 (67%), Gaps = 4/295 (1%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL+RM +VGICGSDVHY +  R  +F+VK+PMV+
Sbjct: 9   NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEEGRIGNFIVKKPMVL 68

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G +EKVGS VK L PGDRVA+EPG+     + CK GRYNL P + F ATPP  G+
Sbjct: 69  GHEASGTVEKVGSLVKHLKPGDRVAIEPGVPRENDEFCKSGRYNLSPSIFFCATPPDDGN 128

Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
           L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ GAGPIG+V+
Sbjct: 129 LCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHRVLVCGAGPIGVVS 188

Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGID 256
           +L A+A GA ++V+ D+   RLS AKE+GAD ++++S  + Q+IA +VE +   +G   +
Sbjct: 189 LLVAKAMGAAQVVVTDLSAPRLSKAKEIGADLVLQISKESPQEIAGKVEGL---LGCKPE 245

Query: 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF 311
           V+ +C G   ++   + ATR+GG + LVG+G    T+PL  AA R +    +F +
Sbjct: 246 VTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTIPLLHAAVREVDIKGVFRY 300

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Macaca fascicularis (taxid: 9541)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q64442|DHSO_MOUSE Sorbitol dehydrogenase OS=Mus musculus GN=Sord PE=1 SV=3

 Score =  267 bits (682), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 136/295 (46%), Positives = 198/295 (67%), Gaps = 4/295 (1%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   ++++ + +P LGP DVL++M +VGICGSDVHY +  R  DFVVK+PMV+
Sbjct: 9   NLSLVVHGPGDIRLENYPIPELGPNDVLLKMHSVGICGSDVHYWEHGRIGDFVVKKPMVL 68

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE AG + KVG  VK L PGDRVA+EPG+     ++CK GRYNL P + F ATPP  G+
Sbjct: 69  GHEAAGTVTKVGELVKHLKPGDRVAIEPGVPREVDEYCKIGRYNLTPTIFFCATPPDDGN 128

Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
           L     H AD C+KLPD+V+ EEGA+ EPLSVG++ACRR ++     VL+ GAGP+G+VT
Sbjct: 129 LCRFYKHNADFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCGAGPVGMVT 188

Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL-QDIAEEVEKIQKAMGTGID 256
           +L A+A GA ++V+ D+   RL+ AKE+GAD  ++V     Q+IA +VE +   +G+  +
Sbjct: 189 LLVAKAMGAAQVVVTDLSASRLTKAKEVGADFTIQVGKETPQEIASKVESL---LGSKPE 245

Query: 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF 311
           V+ +C G   ++ T + AT +GG + +VGMG   + +PL  AA R +    +F +
Sbjct: 246 VTIECTGAESSVQTGIYATHSGGTLVIVGMGAEMVNLPLVHAAIREVDIKGVFRY 300

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q5R5F3|DHSO_PONAB Sorbitol dehydrogenase OS=Pongo abelii GN=SORD PE=2 SV=1

 Score =  266 bits (679), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 139/295 (47%), Positives = 196/295 (66%), Gaps = 4/295 (1%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL+RM +VGICGSDVHY +  R  +F+VK+PMV+
Sbjct: 9   NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEDGRIGNFIVKKPMVL 68

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G +EKVGS VK L PGDRVA+EPG      + CK GRYNL P + F ATPP  G+
Sbjct: 69  GHEASGTVEKVGSLVKHLKPGDRVAIEPGAPRENDEFCKIGRYNLSPSIFFCATPPDDGN 128

Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
           L     H A  C+KLPDNV+ EEGAM EPLSVG+HACRR  +     VL+ GAGPIG+VT
Sbjct: 129 LCRFYKHNAAFCYKLPDNVTFEEGAMIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVT 188

Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGID 256
           +L A+A GA ++V+ D+   RLS AKE+GAD ++++S  + Q+IA +VE +   +G   +
Sbjct: 189 LLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGL---LGCKPE 245

Query: 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF 311
           V+ +C G   ++   + AT +GG + LVG+G    T+PL  AA R +    +F +
Sbjct: 246 VTIECTGAGASIQAGIYATHSGGTLVLVGLGSEMTTIPLLHAAIREVDIKGVFRY 300

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|P07846|DHSO_SHEEP Sorbitol dehydrogenase OS=Ovis aries GN=SORD PE=1 SV=1

 Score =  263 bits (671), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 137/295 (46%), Positives = 198/295 (67%), Gaps = 5/295 (1%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL++M +VGICGSDVHY +  R  DFVVK+PMV+
Sbjct: 7   NLSLVVHGPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQG-RIGDFVVKKPMVL 65

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G + KVGS V+ L PGDRVA++PG      + CK GRYNL P + F ATPP  G+
Sbjct: 66  GHEASGTVVKVGSLVRHLQPGDRVAIQPGAPRQTDEFCKIGRYNLSPTIFFCATPPDDGN 125

Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
           L     H A+ C+KLPDNV+ EEGA+ EPLSVG+HACRRA +     VL+ GAGPIGLV 
Sbjct: 126 LCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIGLVN 185

Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGID 256
           +L A+A GA ++V+ D+   RLS AKE+GAD I+++S  + ++IA++VE +   +G+  +
Sbjct: 186 LLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILEISNESPEEIAKKVEGL---LGSKPE 242

Query: 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF 311
           V+ +C G   ++   + AT +GG + LVG+G    +VPL  AA R +    +F +
Sbjct: 243 VTIECTGVETSIQAGIYATHSGGTLVLVGLGSEMTSVPLVHAATREVDIKGVFRY 297

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Ovis aries (taxid: 9940)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|A1D9C9|XYL2_NEOFI Probable D-xylulose reductase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=xdhA PE=3 SV=1

 Score =  252 bits (643), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 131/296 (44%), Positives = 182/296 (61%), Gaps = 3/296 (1%)

Query: 18  NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMV 76
           N++  L G++ +K +   +P L  P+DVLV +K  GICGSDVHY +      FVVK+PMV
Sbjct: 10  NLSFVLEGIHQVKFEDRPIPELKDPHDVLVNVKFTGICGSDVHYWEHGSIGQFVVKDPMV 69

Query: 77  IGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 136
           +GHE +GVI KVGS V  L  GDRVA+EPGI C RC+ CK G+YNLC +M F ATPP  G
Sbjct: 70  LGHESSGVISKVGSAVTGLKVGDRVAMEPGIPCRRCEPCKAGKYNLCEKMAFAATPPYDG 129

Query: 137 SLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLV 196
           +LA   V P D C+KLPDN+SL+EGA+ EPL V +H  R+A++ P  +V++ GAGP+GL+
Sbjct: 130 TLAKFYVLPEDFCYKLPDNISLQEGALMEPLGVAVHIVRQASVTPGQSVIVFGAGPVGLL 189

Query: 197 TMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVK-VSTNLQDIAEEVEKIQKAMGTGI 255
               A+AFGA +I+ VD+   RL  AK   A +  +    +  D A+ + K +  +G G 
Sbjct: 190 CCAVAKAFGAAKIIAVDIQKPRLDFAKRYAATSTFEPAKVSAVDNADRLRK-ENNLGVGA 248

Query: 256 DVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF 311
           DV  D +G   ++ T +   R GG     GMG  E+  P+  A  + L +   F +
Sbjct: 249 DVVIDASGAEPSVHTGIHVLRPGGTYVQGGMGRSEIMFPIMAACTKELTFKGSFRY 304

Xylitol dehydrogenase which catalyzes the conversion of xylitol to D-xylulose. Xylose is a major component of hemicelluloses such as xylan. Most fungi utilize D-xylose via three enzymatic reactions, xylose reductase (XR), xylitol dehydrogenase (XDH), and xylulokinase, to form xylulose 5-phosphate, which enters pentose phosphate pathway.

Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) (taxid: 331117)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

>sp|Q4WAU7|XYL2_ASPFU Probable D-xylulose reductase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=xdhA PE=3 SV=2

 Score =  248 bits (632), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 130/296 (43%), Positives = 181/296 (61%), Gaps = 3/296 (1%)

Query: 18  NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMV 76
           N++  L G++ +K +   +P L  P+DVLV +K  GICGSDVHY +      FVVK PMV
Sbjct: 10  NLSFVLEGIHQVKFEDRPIPELKDPHDVLVNVKFTGICGSDVHYWEHGSIGQFVVKGPMV 69

Query: 77  IGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 136
           +GHE +GVI KVGS V  L  GDRVA+EPGI C RC+ CK G+YNLC +M F ATPP  G
Sbjct: 70  LGHESSGVISKVGSAVTGLKVGDRVAMEPGIPCRRCEPCKAGKYNLCEKMAFAATPPYDG 129

Query: 137 SLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLV 196
           +LA   V P D C+KLPDN+SL+EGA+ EPL V +H  ++A++ P  +V++ GAGP+GL+
Sbjct: 130 TLAKFYVLPEDFCYKLPDNISLQEGALMEPLGVAVHIVKQASVTPGQSVIVFGAGPVGLL 189

Query: 197 TMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVK-VSTNLQDIAEEVEKIQKAMGTGI 255
               A+AFGA +I+ VD+   RL  AK+  A +  +    +  D A+ + K +  +G G 
Sbjct: 190 CCAVAKAFGAAKIIAVDIQKARLDFAKKYAATSTFEPAKVSAVDNADRLRK-ENNLGVGA 248

Query: 256 DVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF 311
           DV  D +G   ++ T +   R GG     GMG  E+  P+  A  + L     F +
Sbjct: 249 DVVIDASGAEPSVHTGIHVLRPGGTYVQGGMGRSEIMFPIMAACTKELAIKGSFRY 304

Xylitol dehydrogenase which catalyzes the conversion of xylitol to D-xylulose. Xylose is a major component of hemicelluloses such as xylan. Most fungi utilize D-xylose via three enzymatic reactions, xylose reductase (XR), xylitol dehydrogenase (XDH), and xylulokinase, to form xylulose 5-phosphate, which enters pentose phosphate pathway.

Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	321
224120122	364	predicted protein [Populus trichocarpa]	0.968	0.854	0.852	1e-155
255539581	364	alcohol dehydrogenase, putative [Ricinus	0.968	0.854	0.852	1e-153
358248648	364	uncharacterized protein LOC100791559 [Gl	0.971	0.857	0.830	1e-152
358345351	362	L-idonate 5-dehydrogenase [Medicago trun	0.962	0.853	0.823	1e-151
356559880	364	PREDICTED: L-idonate 5-dehydrogenase-lik	0.971	0.857	0.820	1e-151
217072128	362	unknown [Medicago truncatula] gi|3885198	0.962	0.853	0.816	1e-150
350538545	355	sorbitol related enzyme [Solanum lycoper	0.940	0.850	0.823	1e-148
15242240	364	L-iditol 2-dehydrogenase [Arabidopsis th	0.968	0.854	0.816	1e-148
21553353	364	sorbitol dehydrogenase-like protein [Ara	0.968	0.854	0.813	1e-148
225469310	365	PREDICTED: L-idonate 5-dehydrogenase [Vi	0.968	0.852	0.836	1e-147

>gi|224120122|ref|XP_002318247.1| predicted protein [Populus trichocarpa] gi|222858920|gb|EEE96467.1| predicted protein [Populus trichocarpa]

 Score =  552 bits (1422), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 265/311 (85%), Positives = 288/311 (92%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGGMS GE +DGEE NMAAWLLGVNTLKIQPF+LP LGP+DV VRMKAVGICGSDVHY
Sbjct: 1   MGKGGMSHGETKDGEEENMAAWLLGVNTLKIQPFKLPCLGPHDVRVRMKAVGICGSDVHY 60

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY 120
           LKT++CA FVVKEPMVIGHECAG+IE+VGSE+K+LVPGDRVALEPGISCWRC  CK GRY
Sbjct: 61  LKTMKCAHFVVKEPMVIGHECAGIIEEVGSEIKSLVPGDRVALEPGISCWRCYLCKEGRY 120

Query: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIG 180
           NLCP+MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG+HACRRANIG
Sbjct: 121 NLCPDMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIG 180

Query: 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI 240
           PETNVL+MGAGPIGLVT+L ARAFGAPRIVIVDVDDYRLSVAK+LGAD IVKVSTNLQD+
Sbjct: 181 PETNVLVMGAGPIGLVTLLAARAFGAPRIVIVDVDDYRLSVAKDLGADEIVKVSTNLQDV 240

Query: 241 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAA 300
            +EV  I +AMGTG+DV+FDCAGFNKTMSTALSATR GGKVCL+GMGH EMTVPLTPAAA
Sbjct: 241 DQEVVLIHQAMGTGVDVTFDCAGFNKTMSTALSATRPGGKVCLIGMGHNEMTVPLTPAAA 300

Query: 301 RYLIYSFLFHF 311
           R +    +F +
Sbjct: 301 REVDVIGVFRY 311

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255539581|ref|XP_002510855.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223549970|gb|EEF51457.1| alcohol dehydrogenase, putative [Ricinus communis]

 Score =  548 bits (1411), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 265/311 (85%), Positives = 287/311 (92%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGGMS GE +D +E N+AAWLLGVNTLKIQPF+LPSLGP DV VRMKAVGICGSDVHY
Sbjct: 1   MGKGGMSHGENKDVQEENLAAWLLGVNTLKIQPFKLPSLGPNDVRVRMKAVGICGSDVHY 60

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY 120
           LKTLRCA FVV+EPMVIGHECAG+IE VGSEVK LVPGDRVALEPGISCWRCD CK GRY
Sbjct: 61  LKTLRCAHFVVEEPMVIGHECAGIIEGVGSEVKNLVPGDRVALEPGISCWRCDLCKEGRY 120

Query: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIG 180
           NLCPEMKFFATPPVHGSLANQVVHPADLCF+LP+NVSLEEGAMCEPLSVG+HACRRANIG
Sbjct: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFRLPENVSLEEGAMCEPLSVGVHACRRANIG 180

Query: 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI 240
           PETNVL+MGAGPIGLVTML ARAFGAPRIVIVDVDDYRLSVAK+LGAD IVKVST++QD+
Sbjct: 181 PETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKDLGADAIVKVSTSIQDV 240

Query: 241 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAA 300
           A+EV  I KAMGTG+DV+ DCAGFNKTMS+ALSATR+GGKVCLVGMGH EMTVPLTPAAA
Sbjct: 241 ADEVVLIHKAMGTGVDVTLDCAGFNKTMSSALSATRSGGKVCLVGMGHNEMTVPLTPAAA 300

Query: 301 RYLIYSFLFHF 311
           R +    +F +
Sbjct: 301 REVDVIGVFRY 311

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248648|ref|NP_001239661.1| uncharacterized protein LOC100791559 [Glycine max] gi|255638941|gb|ACU19772.1| unknown [Glycine max]

 Score =  542 bits (1397), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 259/312 (83%), Positives = 286/312 (91%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGGMS  E  +G+E NMAAWL+G+N+LKIQPF+LP+LGP+DV VRMKAVGICGSDVHY
Sbjct: 1   MGKGGMSIDEHGEGKEENMAAWLVGINSLKIQPFKLPTLGPHDVRVRMKAVGICGSDVHY 60

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY 120
           LKTLRCA F+VKEPMVIGHECAG+IE+VGS+VK+LVPGDRVA+EPGISCWRCDHCK GRY
Sbjct: 61  LKTLRCAHFIVKEPMVIGHECAGIIEEVGSQVKSLVPGDRVAIEPGISCWRCDHCKQGRY 120

Query: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIG 180
           NLC +MKFFATPPVHGSLANQ+VHPADLCFKLPDNVSLEEGAMCEPLSVG+HACRRANIG
Sbjct: 121 NLCDDMKFFATPPVHGSLANQIVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIG 180

Query: 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI 240
           PET VLIMGAGPIGLVTML ARAFGAPR VIVDVDDYRLSVAK LGAD+IVKVSTN+QD+
Sbjct: 181 PETYVLIMGAGPIGLVTMLAARAFGAPRTVIVDVDDYRLSVAKSLGADDIVKVSTNIQDV 240

Query: 241 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAA 300
           AEEV +IQK MG  IDV+FDCAGF+KTMSTALSAT+ GGKVCLVGMGH EMTVPLTPAAA
Sbjct: 241 AEEVVQIQKVMGADIDVTFDCAGFDKTMSTALSATQPGGKVCLVGMGHSEMTVPLTPAAA 300

Query: 301 RYLIYSFLFHFF 312
           R +    +F + 
Sbjct: 301 REVDVLGVFRYM 312

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358345351|ref|XP_003636744.1| L-idonate 5-dehydrogenase [Medicago truncatula] gi|355502679|gb|AES83882.1| L-idonate 5-dehydrogenase [Medicago truncatula]

 Score =  541 bits (1395), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 256/311 (82%), Positives = 288/311 (92%), Gaps = 2/311 (0%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGGMS    +D E+ NMAAWL+G+NTLKIQPF LPSLGP+DV ++MKAVGICGSDVHY
Sbjct: 1   MGKGGMSV--DDDVEQQNMAAWLVGLNTLKIQPFNLPSLGPHDVRIKMKAVGICGSDVHY 58

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY 120
           LKTLRCADF+VKEPMVIGHECAG+IE+VGS+VKTLVPGDRVA+EPGISCWRCDHCK GRY
Sbjct: 59  LKTLRCADFIVKEPMVIGHECAGIIEEVGSQVKTLVPGDRVAIEPGISCWRCDHCKLGRY 118

Query: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIG 180
           NLCP+MKFFATPPVHGSLANQ+VHPADLCFKLP+NVSLEEGAMCEPLSVG+HACRRANIG
Sbjct: 119 NLCPDMKFFATPPVHGSLANQIVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRANIG 178

Query: 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI 240
           PETNVLIMGAGPIGLVTML ARAFGAPRIV+VDVDD+RLSVAK LGAD+IVKVSTN+QD+
Sbjct: 179 PETNVLIMGAGPIGLVTMLSARAFGAPRIVVVDVDDHRLSVAKSLGADDIVKVSTNIQDV 238

Query: 241 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAA 300
           AEEV++I   +G G+DV+FDCAGFNKTM+TAL+AT+ GGKVCLVGMGH EMTVPLTPAAA
Sbjct: 239 AEEVKQIHNVLGAGVDVTFDCAGFNKTMTTALTATQPGGKVCLVGMGHSEMTVPLTPAAA 298

Query: 301 RYLIYSFLFHF 311
           R +    +F +
Sbjct: 299 REVDVVGIFRY 309

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559880|ref|XP_003548224.1| PREDICTED: L-idonate 5-dehydrogenase-like [Glycine max]

 Score =  539 bits (1388), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 256/312 (82%), Positives = 287/312 (91%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGGMS  E  +G+E NMAAWL+G+NTLKIQPF+LP+LGP+DV VRMKAVGICGSDVHY
Sbjct: 1   MGKGGMSIDEHGEGKEENMAAWLVGMNTLKIQPFKLPTLGPHDVRVRMKAVGICGSDVHY 60

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY 120
           LKTLRCA F+VKEPMVIGHECAG+IE+VGS+VK+LVPGDRVA+EPGISCW C+HCK GRY
Sbjct: 61  LKTLRCAHFIVKEPMVIGHECAGIIEEVGSQVKSLVPGDRVAIEPGISCWHCNHCKHGRY 120

Query: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIG 180
           NLC +MKFFATPPVHGSLANQ+VHPADLCFKLPDNVSLEEGAMCEPLSVG+HACRRANIG
Sbjct: 121 NLCDDMKFFATPPVHGSLANQIVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIG 180

Query: 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI 240
           PETNVLIMGAGPIGLVTML ARAFGAP+ VIVDVDD+RLSVAK LGAD+I+KVSTN++D+
Sbjct: 181 PETNVLIMGAGPIGLVTMLAARAFGAPKTVIVDVDDHRLSVAKSLGADDIIKVSTNIKDV 240

Query: 241 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAA 300
           AEEV +IQK MG GIDV+FDCAGF+KTMSTALSAT+ GGKVCLVGMGH EMTVPLTPAAA
Sbjct: 241 AEEVVQIQKVMGAGIDVTFDCAGFDKTMSTALSATQPGGKVCLVGMGHSEMTVPLTPAAA 300

Query: 301 RYLIYSFLFHFF 312
           R +    +F + 
Sbjct: 301 REVDVVGVFRYM 312

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217072128|gb|ACJ84424.1| unknown [Medicago truncatula] gi|388519843|gb|AFK47983.1| unknown [Medicago truncatula]

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 254/311 (81%), Positives = 286/311 (91%), Gaps = 2/311 (0%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGGMS    +D E+ NMAAWL+G+NTLKIQPF LPSLGP+DV ++MKAVGICGSDVHY
Sbjct: 1   MGKGGMSV--DDDVEQQNMAAWLVGLNTLKIQPFNLPSLGPHDVRIKMKAVGICGSDVHY 58

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY 120
           LKTLRCADF+VKEPMVIGHECAG+I + GS+VKTLVPGDRVA+EPGISCWRCDHCK GRY
Sbjct: 59  LKTLRCADFIVKEPMVIGHECAGIIGEAGSQVKTLVPGDRVAIEPGISCWRCDHCKLGRY 118

Query: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIG 180
           NLCP+MKFFATPPVHGSLANQ+VHPADLCFKLP+NVSLEEGAMCEPLSVG+HACRRANIG
Sbjct: 119 NLCPDMKFFATPPVHGSLANQIVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRANIG 178

Query: 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI 240
           PETNVLIMGAGPIGLVTML ARAFGAPRIV+VDVDD+RLSVAK LGAD+IVKVSTN+QD+
Sbjct: 179 PETNVLIMGAGPIGLVTMLSARAFGAPRIVVVDVDDHRLSVAKSLGADDIVKVSTNIQDV 238

Query: 241 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAA 300
           AEEV++I   +G G+DV+FDCAGFNKTM+TAL+AT+ GGKVCLVGMGH EMTVPLTPAAA
Sbjct: 239 AEEVKQIHNVLGAGVDVTFDCAGFNKTMTTALTATQPGGKVCLVGMGHSEMTVPLTPAAA 298

Query: 301 RYLIYSFLFHF 311
           R +    +F +
Sbjct: 299 REVDVVGIFRY 309

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|350538545|ref|NP_001234092.1| sorbitol related enzyme [Solanum lycopersicum] gi|78183416|dbj|BAE47038.1| sorbitol related enzyme [Solanum lycopersicum]

 Score =  531 bits (1368), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 256/311 (82%), Positives = 280/311 (90%), Gaps = 9/311 (2%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGG  +         NMAAWLLGVNTLKIQPF LP+LGP+DV VRMKAVGICGSDVHY
Sbjct: 1   MGKGGSDE---------NMAAWLLGVNTLKIQPFNLPALGPHDVRVRMKAVGICGSDVHY 51

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY 120
           LKT+RCADFVVKEPMVIGHECAG+IE+VG EVKTLVPGDRVALEPGISCWRC+ CK GRY
Sbjct: 52  LKTMRCADFVVKEPMVIGHECAGIIEEVGGEVKTLVPGDRVALEPGISCWRCNLCKEGRY 111

Query: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIG 180
           NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD++SLEEGAMCEPLSVG+HACRRAN+G
Sbjct: 112 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDDISLEEGAMCEPLSVGVHACRRANVG 171

Query: 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI 240
           PETN+L++GAGPIGLVT+L ARAFGAPRIVIVDVDDYRLSVAK+LGAD+IVKVS N+QD+
Sbjct: 172 PETNILVLGAGPIGLVTLLAARAFGAPRIVIVDVDDYRLSVAKKLGADDIVKVSINIQDV 231

Query: 241 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAA 300
           A ++E IQKAMG GID SFDCAGFNKTMSTAL ATR GGKVCLVGMGH EMTVPLTPAAA
Sbjct: 232 ATDIENIQKAMGGGIDASFDCAGFNKTMSTALGATRPGGKVCLVGMGHHEMTVPLTPAAA 291

Query: 301 RYLIYSFLFHF 311
           R +    +F +
Sbjct: 292 REVDVIGIFRY 302

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15242240|ref|NP_200010.1| L-iditol 2-dehydrogenase [Arabidopsis thaliana] gi|42573658|ref|NP_974925.1| L-iditol 2-dehydrogenase [Arabidopsis thaliana] gi|13877797|gb|AAK43976.1|AF370161_1 putative sorbitol dehydrogenase [Arabidopsis thaliana] gi|10177732|dbj|BAB11045.1| sorbitol dehydrogenase-like protein [Arabidopsis thaliana] gi|22136876|gb|AAM91782.1| putative sorbitol dehydrogenase [Arabidopsis thaliana] gi|110741231|dbj|BAF02166.1| sorbitol dehydrogenase-like protein [Arabidopsis thaliana] gi|332008769|gb|AED96152.1| L-iditol 2-dehydrogenase [Arabidopsis thaliana] gi|332008770|gb|AED96153.1| L-iditol 2-dehydrogenase [Arabidopsis thaliana]

 Score =  530 bits (1365), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 254/311 (81%), Positives = 281/311 (90%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGGMSQGE    EE NMAAWL+G+NTLKIQPF LPS+GP+DV VRMKAVGICGSDVHY
Sbjct: 1   MGKGGMSQGEGSKVEEENMAAWLVGINTLKIQPFLLPSVGPHDVRVRMKAVGICGSDVHY 60

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY 120
           LKT+RCADFVVKEPMVIGHECAG+IE+VG EVK LV GDRVALEPGISCWRC+ C+ GRY
Sbjct: 61  LKTMRCADFVVKEPMVIGHECAGIIEEVGEEVKHLVVGDRVALEPGISCWRCNLCREGRY 120

Query: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIG 180
           NLCPEMKFFATPPVHGSLANQVVHPADLCFKLP+NVSLEEGAMCEPLSVG+HACRRA +G
Sbjct: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRAEVG 180

Query: 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI 240
           PETNVL+MGAGPIGLVTML ARAF  PRIVIVDVD+ RL+VAK+LGAD IV+V+TNL+D+
Sbjct: 181 PETNVLVMGAGPIGLVTMLAARAFSVPRIVIVDVDENRLAVAKQLGADEIVQVTTNLEDV 240

Query: 241 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAA 300
             EVE+IQKAMG+ IDV+FDCAGFNKTMSTAL+ATR GGKVCLVGMGH  MTVPLTPAAA
Sbjct: 241 GSEVEQIQKAMGSNIDVTFDCAGFNKTMSTALAATRCGGKVCLVGMGHGIMTVPLTPAAA 300

Query: 301 RYLIYSFLFHF 311
           R +    +F +
Sbjct: 301 REVDVVGVFRY 311

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21553353|gb|AAM62446.1| sorbitol dehydrogenase-like protein [Arabidopsis thaliana]

 Score =  528 bits (1361), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 253/311 (81%), Positives = 281/311 (90%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGGMSQGE    EE NMAAWL+G+NTLKIQPF LPS+GP+DV VRMKAVGICGSDVHY
Sbjct: 1   MGKGGMSQGEGSKVEEENMAAWLVGINTLKIQPFLLPSVGPHDVRVRMKAVGICGSDVHY 60

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY 120
           LKT+RCADFVVKEPMVIGHECAG+IE+VG EVK LV GDRVALEPGISCWRC+ C+ GRY
Sbjct: 61  LKTMRCADFVVKEPMVIGHECAGIIEEVGEEVKHLVVGDRVALEPGISCWRCNLCREGRY 120

Query: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIG 180
           NLCPEMKFFATPPVHGSLANQVVHPADLCFKLP+NVSLEEGAMCEPLSVG+HACRRA +G
Sbjct: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRAEVG 180

Query: 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI 240
           PETNVL+MGAGPIGLVTML A+AF  PRIVIVDVD+ RL+VAK+LGAD IV+V+TNL+D+
Sbjct: 181 PETNVLVMGAGPIGLVTMLAAQAFSVPRIVIVDVDENRLAVAKQLGADEIVQVTTNLEDV 240

Query: 241 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAA 300
             EVE+IQKAMG+ IDV+FDCAGFNKTMSTAL+ATR GGKVCLVGMGH  MTVPLTPAAA
Sbjct: 241 GSEVEQIQKAMGSNIDVTFDCAGFNKTMSTALAATRCGGKVCLVGMGHGIMTVPLTPAAA 300

Query: 301 RYLIYSFLFHF 311
           R +    +F +
Sbjct: 301 REVDVVGVFRY 311

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225469310|ref|XP_002269895.1| PREDICTED: L-idonate 5-dehydrogenase [Vitis vinifera] gi|297741125|emb|CBI31856.3| unnamed protein product [Vitis vinifera]

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 261/312 (83%), Positives = 281/312 (90%), Gaps = 1/312 (0%)

Query: 1   MGKGGMSQGEKEDGEEV-NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVH 59
           MGKGGMSQG    GE   NMAAWLLGVN LKIQPF LP LGP+DV VRMKAVGICGSDVH
Sbjct: 1   MGKGGMSQGGDGRGEGEENMAAWLLGVNNLKIQPFILPPLGPHDVRVRMKAVGICGSDVH 60

Query: 60  YLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGR 119
           YLK LRCADF+VKEPMVIGHECAG+I++VG +VK+LVPGDRVALEPGISCWRC  CK GR
Sbjct: 61  YLKKLRCADFIVKEPMVIGHECAGIIDEVGPQVKSLVPGDRVALEPGISCWRCQLCKEGR 120

Query: 120 YNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANI 179
           YNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG+HACRRA+I
Sbjct: 121 YNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRADI 180

Query: 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQD 239
           GPE+NVL+MGAGPIGLVTML ARAFGAPRIVIVDVDDYRLSVAK+LGAD IVKVSTN+QD
Sbjct: 181 GPESNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKDLGADEIVKVSTNIQD 240

Query: 240 IAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAA 299
           +AEEV +I KAMG  +DVSFDCAGF+KTMSTALSAT  GGKVCLVGMGH EMTVPLTPAA
Sbjct: 241 VAEEVVQIHKAMGARVDVSFDCAGFDKTMSTALSATSTGGKVCLVGMGHNEMTVPLTPAA 300

Query: 300 ARYLIYSFLFHF 311
           AR +    +F +
Sbjct: 301 AREVDVVGVFRY 312

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	321
TAIR|locus:2173093	364	AT5G51970 [Arabidopsis thalian	0.937	0.826	0.840	5.1e-138
WB|WBGene00011003	347	R04B5.5 [Caenorhabditis elegan	0.909	0.841	0.488	3.1e-76
FB|FBgn0022359	360	Sodh-2 "Sorbitol dehydrogenase	0.912	0.813	0.510	1.2e-74
FB|FBgn0024289	360	Sodh-1 "Sorbitol dehydrogenase	0.912	0.813	0.5	6.5e-74
WB|WBGene00011004	347	R04B5.6 [Caenorhabditis elegan	0.878	0.812	0.494	1.6e-72
RGD|3734	357	Sord "sorbitol dehydrogenase"	0.906	0.815	0.464	2.1e-68
UNIPROTKB|Q00796	357	SORD "Sorbitol dehydrogenase"	0.906	0.815	0.474	5.6e-68
UNIPROTKB|Q58D31	356	SORD "Sorbitol dehydrogenase"	0.903	0.814	0.479	7.2e-68
UNIPROTKB|Q4R639	357	SORD "Sorbitol dehydrogenase"	0.906	0.815	0.467	7.2e-68
MGI|MGI:98266	357	Sord "sorbitol dehydrogenase"	0.906	0.815	0.461	7.2e-68

TAIR|locus:2173093 AT5G51970 [Arabidopsis thaliana (taxid:3702)]

 Score = 1351 (480.6 bits), Expect = 5.1e-138, P = 5.1e-138
 Identities = 253/301 (84%), Positives = 277/301 (92%)

Query:     1 MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
             MGKGGMSQGE    EE NMAAWL+G+NTLKIQPF LPS+GP+DV VRMKAVGICGSDVHY
Sbjct:     1 MGKGGMSQGEGSKVEEENMAAWLVGINTLKIQPFLLPSVGPHDVRVRMKAVGICGSDVHY 60

Query:    61 LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY 120
             LKT+RCADFVVKEPMVIGHECAG+IE+VG EVK LV GDRVALEPGISCWRC+ C+ GRY
Sbjct:    61 LKTMRCADFVVKEPMVIGHECAGIIEEVGEEVKHLVVGDRVALEPGISCWRCNLCREGRY 120

Query:   121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIG 180
             NLCPEMKFFATPPVHGSLANQVVHPADLCFKLP+NVSLEEGAMCEPLSVG+HACRRA +G
Sbjct:   121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRAEVG 180

Query:   181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI 240
             PETNVL+MGAGPIGLVTML ARAF  PRIVIVDVD+ RL+VAK+LGAD IV+V+TNL+D+
Sbjct:   181 PETNVLVMGAGPIGLVTMLAARAFSVPRIVIVDVDENRLAVAKQLGADEIVQVTTNLEDV 240

Query:   241 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAA 300
               EVE+IQKAMG+ IDV+FDCAGFNKTMSTAL+ATR GGKVCLVGMGH  MTVPLTPAAA
Sbjct:   241 GSEVEQIQKAMGSNIDVTFDCAGFNKTMSTALAATRCGGKVCLVGMGHGIMTVPLTPAAA 300

Query:   301 R 301
             R
Sbjct:   301 R 301

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

WB|WBGene00011003 R04B5.5 [Caenorhabditis elegans (taxid:6239)]

 Score = 768 (275.4 bits), Expect = 3.1e-76, P = 3.1e-76
 Identities = 144/295 (48%), Positives = 205/295 (69%)

Query:    18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
             N++A L GV+ L+++   +P  GP  VLV++  VGICGSDVHY        FVVKEPM++
Sbjct:     5 NLSAVLYGVDDLRLEQVPIPKPGPNQVLVKVHTVGICGSDVHYWTHGAIGPFVVKEPMIV 64

Query:    78 GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
             GHE +G++ +VG+EVK L  GDR+A+EPG+ C  C+HCK GRYNLCPEM+FFATPPVHG+
Sbjct:    65 GHETSGIVSEVGNEVKHLKVGDRIAMEPGLPCKLCEHCKTGRYNLCPEMRFFATPPVHGT 124

Query:   138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
             L+  VVH AD CFKLPDN+S E+GA+ EPLSV +HACRR N+     VL++GAGPIG++ 
Sbjct:   125 LSRFVVHDADFCFKLPDNLSFEDGALIEPLSVAIHACRRGNVQMGHRVLVLGAGPIGVLN 184

Query:   198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI-D 256
             ++ A+A GA ++VI D+DD RL++AK+LGAD  + V     D  +   +I  A+G    D
Sbjct:   185 LITAKAVGAGKVVITDLDDGRLALAKKLGADATINVKGKSLDAVKS--EIITALGDQQPD 242

Query:   257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF 311
             V  +C G   ++ TA++ T++GG + LVG+G   + +P+  +A R +    +F +
Sbjct:   243 VCIECTGAQPSIETAITTTKSGGVIVLVGLGADRVEIPIIESATREVDMRGIFRY 297

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

FB|FBgn0022359 Sodh-2 "Sorbitol dehydrogenase-2" [Drosophila melanogaster (taxid:7227)]

 Score = 753 (270.1 bits), Expect = 1.2e-74, P = 1.2e-74
 Identities = 150/294 (51%), Positives = 197/294 (67%)

Query:    18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
             N+ A L G+  L+++   +P +   +VL+ M +VGICGSDVHYL   R  DFV+ +PM+I
Sbjct:     5 NLTAVLHGIEDLRLEQRPIPEIADDEVLLAMDSVGICGSDVHYLAHGRIGDFVLTKPMII 64

Query:    78 GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
             GHE AGV+ K+G +V TL  GDRVA+EPG+ C  CDHCK GRYNLC +M F ATPP  G+
Sbjct:    65 GHEAAGVVAKLGKKVTTLKVGDRVAIEPGVPCRYCDHCKQGRYNLCADMVFCATPPYDGN 124

Query:   138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
             L     H AD CFKLPD+VS+EEGA+ EPLSVG+HACRRA +G  + VLI+GAGPIGLVT
Sbjct:   125 LTRYYKHAADFCFKLPDHVSMEEGALLEPLSVGVHACRRAGVGLGSKVLILGAGPIGLVT 184

Query:   198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257
             +L A+A GA  I+I D+   RL VAKELGA + + +  + Q   E V+ + + M    D 
Sbjct:   185 LLAAQAMGASEILITDLVQQRLDVAKELGATHTLLLQRD-QSAEETVKVVHQTMSEVPDK 243

Query:   258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF 311
             S DC G   +   A+ ATR+GG V +VGMG  E+ +PL  A AR +    +F +
Sbjct:   244 SIDCCGAESSARLAIFATRSGGVVVVVGMGAPEVKLPLINALAREIDIRGVFRY 297

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=ISS;TAS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

FB|FBgn0024289 Sodh-1 "Sorbitol dehydrogenase 1" [Drosophila melanogaster (taxid:7227)]

 Score = 746 (267.7 bits), Expect = 6.5e-74, P = 6.5e-74
 Identities = 147/294 (50%), Positives = 197/294 (67%)

Query:    18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
             N+ A L G+  ++++   +P +   +VL+ M +VGICGSDVHYL   R  DFV+ +PM+I
Sbjct:     5 NLTAVLHGIEDMRLEQRPIPEIADDEVLLAMDSVGICGSDVHYLAHGRIGDFVLTKPMII 64

Query:    78 GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
             GHE AGV+ K+G +V TL  GDRVA+EPG+ C +CDHCK G+YNLCP M F ATPP  G+
Sbjct:    65 GHESAGVVAKLGKKVTTLKVGDRVAIEPGVPCRKCDHCKQGKYNLCPGMVFCATPPYDGN 124

Query:   138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
             L     H AD CFKLPD+V++EEGA+ EPLSVG+HAC+RA +   + VLI+GAGPIGLVT
Sbjct:   125 LTRYYKHAADFCFKLPDHVTMEEGALLEPLSVGVHACKRAEVTLGSKVLILGAGPIGLVT 184

Query:   198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257
             ++ A+A GA  I+I D+   RL VAKELGA + + +  + Q   E    +QK MG   D 
Sbjct:   185 LMAAQAMGASEILITDLVQQRLDVAKELGATHTLLLKRD-QTAEETAVLVQKTMGGQPDK 243

Query:   258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF 311
             S DC G   +   A+ ATR+GG V +VGMG  E+ +PL  A AR +    +F +
Sbjct:   244 SIDCCGAESSARLAIFATRSGGIVVVVGMGAAEIKLPLINALAREVDIRGVFRY 297

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=NAS

GO:0000166 "nucleotide binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

WB|WBGene00011004 R04B5.6 [Caenorhabditis elegans (taxid:6239)]

 Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
 Identities = 141/285 (49%), Positives = 194/285 (68%)

Query:    18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
             N++A L G+N L+++   +   GP  VLV++  VGICGSDVH+L       FVVKEPMV+
Sbjct:     5 NLSAVLYGINDLRLEQAPISKPGPRQVLVKINTVGICGSDVHFLTHGAIGSFVVKEPMVL 64

Query:    78 GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
             GHE +GV+ ++GSEVK    GDR+A+EPG+ C  C+HCK GRYNLCP+M+FFATPPV+G+
Sbjct:    65 GHESSGVVSEIGSEVKGFKVGDRIAMEPGLPCKLCEHCKIGRYNLCPDMRFFATPPVNGA 124

Query:   138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
             L+  VVH AD CFKLPDN+S E+GA+ EPLSV + ACRR  +     +L++GAGPIG++ 
Sbjct:   125 LSRFVVHDADFCFKLPDNLSFEDGALLEPLSVAIQACRRGTVQMGQKILVLGAGPIGVLN 184

Query:   198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID- 256
             +L A+A GA ++VI D++D RL++A+ LGAD  + V     D  E   +I KA G     
Sbjct:   185 LLTAKAIGASKVVITDLNDERLALARLLGADATINVMGKRSD--EVRSEIIKAFGDQQPH 242

Query:   257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAAR 301
             VS +C G    + TA+  TR+GG V LVG+G   + +PL  +  R
Sbjct:   243 VSIECTGVQPCVETAIMTTRSGGVVVLVGLGAERVEIPLIQSPTR 287

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

RGD|3734 Sord "sorbitol dehydrogenase" [Rattus norvegicus (taxid:10116)]

 Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
 Identities = 137/295 (46%), Positives = 199/295 (67%)

Query:    18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
             N++  + G   ++++ + +P LGP DVL++M +VGICGSDVHY +  R  DFVVK+PMV+
Sbjct:     9 NLSLVVHGPGDIRLENYPIPELGPNDVLLKMHSVGICGSDVHYWEHGRIGDFVVKKPMVL 68

Query:    78 GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
             GHE AG + KVG  VK L PGDRVA+EPG+     + CK GRYNL P + F ATPP  G+
Sbjct:    69 GHEAAGTVTKVGPMVKHLKPGDRVAIEPGVPREIDEFCKIGRYNLTPSIFFCATPPDDGN 128

Query:   138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
             L     H AD C+KLPD+V+ EEGA+ EPLSVG++ACRR ++     VL+ GAGPIG+VT
Sbjct:   129 LCRFYKHSADFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCGAGPIGIVT 188

Query:   198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL-QDIAEEVEKIQKAMGTGID 256
             +L A+A GA ++V++D+   RL+ AKE+GAD  ++V+     DIA++VE +   +G+  +
Sbjct:   189 LLVAKAMGASQVVVIDLSASRLAKAKEVGADFTIQVAKETPHDIAKKVESV---LGSKPE 245

Query:   257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF 311
             V+ +C G   ++ T + AT +GG + +VGMG   + +PL  AA R +    +F +
Sbjct:   246 VTIECTGAESSVQTGIYATHSGGTLVVVGMGPEMINLPLVHAAVREVDIKGVFRY 300

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=IEA;ISO

GO:0005575 "cellular_component" evidence=ND

GO:0005739 "mitochondrion" evidence=ISO

GO:0006060 "sorbitol metabolic process" evidence=ISO

GO:0006062 "sorbitol catabolic process" evidence=ISO

GO:0006970 "response to osmotic stress" evidence=IEP

GO:0008270 "zinc ion binding" evidence=ISO;IDA

GO:0009725 "response to hormone stimulus" evidence=IDA

GO:0016020 "membrane" evidence=ISO

GO:0030317 "sperm motility" evidence=ISO;ISS

GO:0031514 "motile cilium" evidence=ISS

GO:0031667 "response to nutrient levels" evidence=IEP

GO:0031966 "mitochondrial membrane" evidence=IEA

GO:0042493 "response to drug" evidence=IEP

GO:0042802 "identical protein binding" evidence=IDA

GO:0046370 "fructose biosynthetic process" evidence=ISO

GO:0046686 "response to cadmium ion" evidence=IDA

GO:0046688 "response to copper ion" evidence=IDA

GO:0051160 "L-xylitol catabolic process" evidence=ISO

GO:0051164 "L-xylitol metabolic process" evidence=ISO

GO:0051287 "NAD binding" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

UNIPROTKB|Q00796 SORD "Sorbitol dehydrogenase" [Homo sapiens (taxid:9606)]

 Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
 Identities = 140/295 (47%), Positives = 195/295 (66%)

Query:    18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
             N++  + G   L+++ + +P  GP +VL+RM +VGICGSDVHY +  R  +F+VK+PMV+
Sbjct:     9 NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVL 68

Query:    78 GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
             GHE +G +EKVGS VK L PGDRVA+EPG      + CK GRYNL P + F ATPP  G+
Sbjct:    69 GHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGN 128

Query:   138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
             L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ GAGPIG+VT
Sbjct:   129 LCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVT 188

Query:   198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL-QDIAEEVEKIQKAMGTGID 256
             +L A+A GA ++V+ D+   RLS AKE+GAD ++++S    Q+IA +VE     +G   +
Sbjct:   189 LLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEG---QLGCKPE 245

Query:   257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF 311
             V+ +C G   ++   + ATR+GG + LVG+G    TVPL  AA R +    +F +
Sbjct:   246 VTIECTGAEASIQAGIYATRSGGNLVLVGLGSEMTTVPLLHAAIREVDIKGVFRY 300

GO:0031966 "mitochondrial membrane" evidence=IEA

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=ISS;IDA

GO:0008270 "zinc ion binding" evidence=ISS;IDA

GO:0006006 "glucose metabolic process" evidence=TAS

GO:0006062 "sorbitol catabolic process" evidence=IDA

GO:0051287 "NAD binding" evidence=IDA

GO:0030246 "carbohydrate binding" evidence=NAS

GO:0016020 "membrane" evidence=IDA

GO:0046370 "fructose biosynthetic process" evidence=IDA

GO:0051160 "L-xylitol catabolic process" evidence=IDA

GO:0051164 "L-xylitol metabolic process" evidence=IDA

GO:0005615 "extracellular space" evidence=TAS

GO:0030317 "sperm motility" evidence=ISS;NAS

GO:0031514 "motile cilium" evidence=ISS

UNIPROTKB|Q58D31 SORD "Sorbitol dehydrogenase" [Bos taurus (taxid:9913)]

 Score = 689 (247.6 bits), Expect = 7.2e-68, P = 7.2e-68
 Identities = 142/296 (47%), Positives = 200/296 (67%)

Query:    18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
             N++  + G   L+++ + +P  GP +VL++M +VGICGSDVHY +  R  DFVVK+PMV+
Sbjct:     8 NLSLVVHGPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKKPMVL 67

Query:    78 GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
             GHE +G + KVGS V+ L PGDRVA+EPG      + CK GRYNL P + F ATPP  G+
Sbjct:    68 GHEASGTVVKVGSLVRHLQPGDRVAIEPGAPRETDEFCKIGRYNLSPTIFFCATPPDDGN 127

Query:   138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
             L     H A+ C+KLPDNV+ EEGA+ EPLSVG+HACRRA +     VL+ GAGPIGLV+
Sbjct:   128 LCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIGLVS 187

Query:   198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL-QDIAEEVEKIQKAMGTGID 256
             +L A+A GA ++V+ D+   RLS AKE+GAD I+++S    Q+IA++VE +   +G+  +
Sbjct:   188 LLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILQISNESPQEIAKKVEGL---LGSKPE 244

Query:   257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMT-VPLTPAAARYLIYSFLFHF 311
             V+ +C G   ++   + AT +GG + LVG+G  EMT VPL  AA R +    +F +
Sbjct:   245 VTIECTGVETSIQAGIYATHSGGTLVLVGLGS-EMTSVPLVHAATREVDIKGVFRY 299

GO:0030317 "sperm motility" evidence=ISS

GO:0031514 "motile cilium" evidence=ISS

GO:0031966 "mitochondrial membrane" evidence=IEA

GO:0051287 "NAD binding" evidence=IEA

GO:0051160 "L-xylitol catabolic process" evidence=IEA

GO:0046370 "fructose biosynthetic process" evidence=IEA

GO:0006062 "sorbitol catabolic process" evidence=IEA

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q4R639 SORD "Sorbitol dehydrogenase" [Macaca fascicularis (taxid:9541)]

 Score = 689 (247.6 bits), Expect = 7.2e-68, P = 7.2e-68
 Identities = 138/295 (46%), Positives = 197/295 (66%)

Query:    18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
             N++  + G   L+++ + +P  GP +VL+RM +VGICGSDVHY +  R  +F+VK+PMV+
Sbjct:     9 NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEEGRIGNFIVKKPMVL 68

Query:    78 GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
             GHE +G +EKVGS VK L PGDRVA+EPG+     + CK GRYNL P + F ATPP  G+
Sbjct:    69 GHEASGTVEKVGSLVKHLKPGDRVAIEPGVPRENDEFCKSGRYNLSPSIFFCATPPDDGN 128

Query:   138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
             L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ GAGPIG+V+
Sbjct:   129 LCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHRVLVCGAGPIGVVS 188

Query:   198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL-QDIAEEVEKIQKAMGTGID 256
             +L A+A GA ++V+ D+   RLS AKE+GAD ++++S    Q+IA +VE +   +G   +
Sbjct:   189 LLVAKAMGAAQVVVTDLSAPRLSKAKEIGADLVLQISKESPQEIAGKVEGL---LGCKPE 245

Query:   257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF 311
             V+ +C G   ++   + ATR+GG + LVG+G    T+PL  AA R +    +F +
Sbjct:   246 VTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTIPLLHAAVREVDIKGVFRY 300

GO:0030317 "sperm motility" evidence=ISS

GO:0031514 "motile cilium" evidence=ISS

MGI|MGI:98266 Sord "sorbitol dehydrogenase" [Mus musculus (taxid:10090)]

 Score = 689 (247.6 bits), Expect = 7.2e-68, P = 7.2e-68
 Identities = 136/295 (46%), Positives = 198/295 (67%)

Query:    18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
             N++  + G   ++++ + +P LGP DVL++M +VGICGSDVHY +  R  DFVVK+PMV+
Sbjct:     9 NLSLVVHGPGDIRLENYPIPELGPNDVLLKMHSVGICGSDVHYWEHGRIGDFVVKKPMVL 68

Query:    78 GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
             GHE AG + KVG  VK L PGDRVA+EPG+     ++CK GRYNL P + F ATPP  G+
Sbjct:    69 GHEAAGTVTKVGELVKHLKPGDRVAIEPGVPREVDEYCKIGRYNLTPTIFFCATPPDDGN 128

Query:   138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
             L     H AD C+KLPD+V+ EEGA+ EPLSVG++ACRR ++     VL+ GAGP+G+VT
Sbjct:   129 LCRFYKHNADFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCGAGPVGMVT 188

Query:   198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL-QDIAEEVEKIQKAMGTGID 256
             +L A+A GA ++V+ D+   RL+ AKE+GAD  ++V     Q+IA +VE +   +G+  +
Sbjct:   189 LLVAKAMGAAQVVVTDLSASRLTKAKEVGADFTIQVGKETPQEIASKVESL---LGSKPE 245

Query:   257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF 311
             V+ +C G   ++ T + AT +GG + +VGMG   + +PL  AA R +    +F +
Sbjct:   246 VTIECTGAESSVQTGIYATHSGGTLVIVGMGAEMVNLPLVHAAIREVDIKGVFRY 300

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=ISO;IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005929 "cilium" evidence=IEA

GO:0006060 "sorbitol metabolic process" evidence=IDA

GO:0006062 "sorbitol catabolic process" evidence=ISO

GO:0008270 "zinc ion binding" evidence=ISO

GO:0009725 "response to hormone stimulus" evidence=ISO

GO:0016020 "membrane" evidence=ISO

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0030317 "sperm motility" evidence=IDA

GO:0042802 "identical protein binding" evidence=ISO

GO:0042995 "cell projection" evidence=IEA

GO:0046370 "fructose biosynthetic process" evidence=ISO

GO:0046686 "response to cadmium ion" evidence=ISO

GO:0046688 "response to copper ion" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0051160 "L-xylitol catabolic process" evidence=ISO

GO:0051164 "L-xylitol metabolic process" evidence=ISO

GO:0051287 "NAD binding" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=ISO;IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q64442	DHSO_MOUSE	1, ., 1, ., 1, ., 1, 4	0.4610	0.9065	0.8151	yes	no
A2QY54	XYL2_ASPNC	1, ., 1, ., 1, ., 9	0.4166	0.9003	0.8072	yes	no
Q5ARL6	XYL2_EMENI	1, ., 1, ., 1, ., 9	0.4203	0.9158	0.8189	yes	no
P27867	DHSO_RAT	1, ., 1, ., 1, ., 1, 4	0.4644	0.9065	0.8151	yes	no
Q86ZV0	XYL2_ASPOR	1, ., 1, ., 1, ., 9	0.4343	0.9096	0.8156	yes	no
Q58D31	DHSO_BOVIN	1, ., 1, ., 1, ., 1, 4	0.4711	0.9065	0.8174	yes	no
Q07786	DHSO2_YEAST	1, ., 1, ., 1, ., 1, 4	0.4006	0.9252	0.8319	yes	no
Q00796	DHSO_HUMAN	1, ., 1, ., 1, ., 1, 4	0.4745	0.9065	0.8151	yes	no
Q5GN51	XYL2_ASPNG	1, ., 1, ., 1, ., 9	0.4166	0.9003	0.8072	yes	no
Q1PSI9	IDND_VITVI	1, ., 1, ., 1, ., n, 8	0.7675	0.9657	0.8469	no	no
P35497	DHSO1_YEAST	1, ., 1, ., 1, ., 1, 4	0.4039	0.9252	0.8319	yes	no
Q4WAU7	XYL2_ASPFU	1, ., 1, ., 1, ., 9	0.4391	0.9127	0.8184	yes	no
Q5R5F3	DHSO_PONAB	1, ., 1, ., 1, ., 1, 4	0.4711	0.9065	0.8151	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.976
4th Layer	1.1.1.n8	0.991

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pg.C_LG_XII1187	L-iditol 2-dehydrogenase (EC-1.1.1.14) (364 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	estExt_Genewise1_v1.C_LG_XVIII2895	xylose isomerase (EC-5.3.1.5) (477 aa)						•	•		0.919
	gw1.125.171.1	fructokinase (EC-2.7.1.4) (320 aa)	•					•			0.901
	eugene3.00070163	fructokinase (EC-2.7.1.4) (329 aa)	•					•			0.900
	gw1.II.2365.1	fructokinase (EC-2.7.1.4) (337 aa)						•			0.899
	gw1.8434.3.1	annotation not avaliable (125 aa)						•			0.899
	fgenesh4_pm.C_LG_IV000247	fructokinase (EC-2.7.1.4) (351 aa)						•			0.899
	fgenesh4_pm.C_LG_I000617	hexokinase (508 aa)						•			0.899
	fgenesh4_pg.C_LG_VII001238	hexokinase (EC-2.7.1.2) (502 aa)						•			0.899
	fgenesh4_pg.C_LG_IX001086	hexokinase (508 aa)						•			0.899
	eugene3.00151131	SubName- Full=Putative uncharacterized protein; (350 aa)						•			0.899

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	321
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	0.0
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	1e-156
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	7e-85
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	2e-80
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	4e-75
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	8e-74
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	2e-72
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	2e-71
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	2e-68
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	1e-65
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	9e-64
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	1e-58
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	9e-57
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	1e-54
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	2e-54
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	1e-53
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	2e-53
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	2e-52
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	6e-51
cd05281	341	cd05281, TDH, Threonine dehydrogenase	1e-50
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	6e-50
PRK09880	343	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro	1e-49
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	3e-49
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	1e-48
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	3e-47
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	9e-46
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	3e-42
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	5e-42
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	8e-42
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	1e-41
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	2e-40
cd08256	350	cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD	2e-40
PRK10309	347	PRK10309, PRK10309, galactitol-1-phosphate dehydro	3e-40
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	3e-40
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	7e-40
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	1e-39
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	3e-39
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	4e-39
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	5e-39
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	1e-38
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	1e-38
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	2e-38
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	4e-38
PRK10083	339	PRK10083, PRK10083, putative oxidoreductase; Provi	7e-37
cd08287	345	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase	3e-36
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	3e-35
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	7e-35
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	2e-34
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	3e-33
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	5e-31
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	1e-30
cd08242	319	cd08242, MDR_like, Medium chain dehydrogenases/red	1e-29
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	3e-28
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	5e-28
PRK09422	338	PRK09422, PRK09422, ethanol-active dehydrogenase/a	3e-27
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	3e-27
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	1e-26
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	2e-26
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	3e-26
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	1e-25
cd08301	369	cd08301, alcohol_DH_plants, Plant alcohol dehydrog	2e-25
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	2e-25
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	5e-25
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	8e-25
TIGR02818	368	TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat	5e-24
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	5e-24
cd08300	368	cd08300, alcohol_DH_class_III, class III alcohol d	1e-23
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	5e-22
cd08230	355	cd08230, glucose_DH, Glucose dehydrogenase	6e-22
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	1e-21
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	1e-21
PLN02740	381	PLN02740, PLN02740, Alcohol dehydrogenase-like	1e-21
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	1e-20
TIGR02819	393	TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenas	1e-20
TIGR03201	349	TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1	3e-20
PLN02586	360	PLN02586, PLN02586, probable cinnamyl alcohol dehy	4e-20
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	2e-19
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	7e-19
cd08238	410	cd08238, sorbose_phosphate_red, L-sorbose-1-phosph	2e-17
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	3e-17
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	3e-17
PLN02827	378	PLN02827, PLN02827, Alcohol dehydrogenase-like	3e-17
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	2e-16
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	5e-16
TIGR03366	280	TIGR03366, HpnZ_proposed, putative phosphonate cat	4e-15
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	1e-14
PLN02178	375	PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase	3e-14
PLN02514	357	PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase	1e-13
smart00829	287	smart00829, PKS_ER, Enoylreductase	2e-13
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	2e-13
TIGR02822	329	TIGR02822, adh_fam_2, zinc-binding alcohol dehydro	5e-13
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	6e-13
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	8e-13
cd08246	393	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	3e-12
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	9e-11
TIGR01751	398	TIGR01751, crot-CoA-red, crotonyl-CoA reductase	1e-10
cd08237	341	cd08237, ribitol-5-phosphate_DH, ribitol-5-phospha	1e-10
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	2e-10
cd08252	336	cd08252, AL_MDR, Arginate lyase and other MDR fami	5e-09
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	1e-08
cd08292	324	cd08292, ETR_like_2, 2-enoyl thioester reductase (	2e-08
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	5e-08
cd08244	324	cd08244, MDR_enoyl_red, Possible enoyl reductase	6e-08
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	3e-07
cd08247	352	cd08247, AST1_like, AST1 is a cytoplasmic protein	2e-06
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	5e-06
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	2e-05
TIGR02817	336	TIGR02817, adh_fam_1, zinc-binding alcohol dehydro	6e-04
cd05280	325	cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ	6e-04
TIGR02823	323	TIGR02823, oxido_YhdH, putative quinone oxidoreduc	7e-04
COG2226	238	COG2226, UbiE, Methylase involved in ubiquinone/me	8e-04

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score =  618 bits (1595), Expect = 0.0
 Identities = 264/301 (87%), Positives = 279/301 (92%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGGMS GE    EE NMAAWL+GVNTLKIQPF+LP LGP+DV VRMKAVGICGSDVHY
Sbjct: 1   MGKGGMSSGEGSGVEEENMAAWLVGVNTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHY 60

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY 120
           LKT+RCADFVVKEPMVIGHECAG+IE+VGSEVK LV GDRVALEPGISCWRC+ CK GRY
Sbjct: 61  LKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRY 120

Query: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIG 180
           NLCPEMKFFATPPVHGSLANQVVHPADLCFKLP+NVSLEEGAMCEPLSVG+HACRRANIG
Sbjct: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRANIG 180

Query: 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI 240
           PETNVL+MGAGPIGLVTML ARAFGAPRIVIVDVDD RLSVAK+LGAD IV VSTN++D+
Sbjct: 181 PETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDV 240

Query: 241 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAA 300
             EVE+IQKAMG GIDVSFDC GFNKTMSTAL ATRAGGKVCLVGMGH EMTVPLTPAAA
Sbjct: 241 ESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAAA 300

Query: 301 R 301
           R
Sbjct: 301 R 301

Length = 364

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score =  439 bits (1131), Expect = e-156
 Identities = 162/283 (57%), Positives = 198/283 (69%), Gaps = 3/283 (1%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
           AA L G   L+++   +P  GP +VLVR++AVGICGSDVHY K  R  DFVVKEPMV+GH
Sbjct: 1   AAVLHGPGDLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGH 60

Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLA 139
           E AG +  VGS V  L  GDRVA+EPG+ C  C+ CK GRYNLCP+M+F ATPPV G+L 
Sbjct: 61  ESAGTVVAVGSGVTHLKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLC 120

Query: 140 NQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTML 199
             V HPAD C KLPDNVSLEEGA+ EPLSVG+HACRRA + P   VL+ GAGPIGL+T  
Sbjct: 121 RYVNHPADFCHKLPDNVSLEEGALVEPLSVGVHACRRAGVRPGDTVLVFGAGPIGLLTAA 180

Query: 200 GARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVS 258
            A+AFGA ++V+ D+D  RL  AKELGA + V V T  +D  E  EKI + +G  G DV 
Sbjct: 181 VAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT--EDTPESAEKIAELLGGKGPDVV 238

Query: 259 FDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAAR 301
            +C G    + TA+ ATR GG V LVGMG  E+T+PL+ A+ R
Sbjct: 239 IECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLR 281

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score =  258 bits (662), Expect = 7e-85
 Identities = 113/292 (38%), Positives = 151/292 (51%), Gaps = 13/292 (4%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
               L+++    P  GP +V VR+ A GICGSD+HY +        ++EPMV+GHE +GV
Sbjct: 5   AAGDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGV 64

Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA----TPPVHGSLAN 140
           +E VG  V  L PG RVA+ P   C  CD+C+ GR NLC  M+F       P V G    
Sbjct: 65  VEAVGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFRE 124

Query: 141 QVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLG 200
            +V  A  C  LPD +SL   A+ EPL+V LHA  RA       VL+ GAGPIG + +  
Sbjct: 125 YLVVDASQCVPLPDGLSLRRAALAEPLAVALHAVNRAGDLAGKRVLVTGAGPIGALVVAA 184

Query: 201 ARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260
           AR  GA  IV  D+ D  L+VA+ +GAD  V       ++A +      A     DV F+
Sbjct: 185 ARRAGAAEIVATDLADAPLAVARAMGADETV-------NLARDPLAAYAADKGDFDVVFE 237

Query: 261 CAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIY--SFLFH 310
            +G    +++AL   R GG V  VGM    + +PL    A+ L    SF F 
Sbjct: 238 ASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLRGSFRFD 289

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score =  247 bits (633), Expect = 2e-80
 Identities = 113/279 (40%), Positives = 164/279 (58%), Gaps = 15/279 (5%)

Query: 19  MAAWLL-GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVH-YLKTLRCADFVVKEPMV 76
           M A +L G   L+ +    P  GP +VLV++KA GICGSD+  YL T          P+V
Sbjct: 1   MKALVLTGPGDLRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGT-----GAYHPPLV 55

Query: 77  IGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 136
           +GHE +G +E+VGS V  L  GDRVA+ P + C +C++CK G Y+LC    +  +    G
Sbjct: 56  LGHEFSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSR-RDG 114

Query: 137 SLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLV 196
           + A  V  PA    K+PD+V  EE AM EP +V LHA R A I     V+++GAG IGL+
Sbjct: 115 AFAEYVSVPARNLIKIPDHVDYEEAAMIEPAAVALHAVRLAGITLGDTVVVIGAGTIGLL 174

Query: 197 TMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM-GTGI 255
            +   +  GA R++ VD+DD +L+VA+ELGAD+ +          E+VEK+++   G G 
Sbjct: 175 AIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE------EDVEKVRELTEGRGA 228

Query: 256 DVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVP 294
           D+  + AG   T+  AL+  R GGKV LVG+ + ++T+ 
Sbjct: 229 DLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLS 267

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score =  234 bits (598), Expect = 4e-75
 Identities = 98/279 (35%), Positives = 141/279 (50%), Gaps = 12/279 (4%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
           A   +G   ++++    P  GP DVL+R+ A GICGSD+H  +      FV    +++GH
Sbjct: 4   AVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGE--PFVPPGDIILGH 61

Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT----PPVH 135
           E  G + +VG  V+    GDRV +EP I C  C +C+ G YNLC    F+        + 
Sbjct: 62  EFVGEVVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGID 120

Query: 136 GSLANQVVHPAD-LCFKLPDNVSLEEGAMCEPLSVGLHAC-RRANIGPETNVLIMGAGPI 193
           G  A  V  PAD    KLPD +  E  A+ EPL+   H    RA + P   V+++GAGPI
Sbjct: 121 GGFAEYVRVPADFNLAKLPDGIDEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPI 180

Query: 194 GLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT 253
           GL+ +  A+  GA  +++VD    RL +AKE G  ++V    N  +     E ++   G 
Sbjct: 181 GLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVV---VNPSEDDAGAEILELTGGR 237

Query: 254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMT 292
           G DV  +  G    +  AL A R GG V +VG+   E  
Sbjct: 238 GADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDI 276

Length = 350

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score =  230 bits (588), Expect = 8e-74
 Identities = 100/286 (34%), Positives = 151/286 (52%), Gaps = 15/286 (5%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
           A    G   L+++   +P  GP +VL+++ A GICG+D+H  +     +F    P+V GH
Sbjct: 3   ALVYEGPGELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYE----GEFGAAPPLVPGH 58

Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLA 139
           E AGV+  VGS+V     GDRVA++P I C  C +C+ GR NLC  +        +G  A
Sbjct: 59  EFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVT-RNGGFA 117

Query: 140 NQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTML 199
             VV PA   +K+PDN+S EE A+ EPLS  +H      I P  +VL+ GAGPIGL+   
Sbjct: 118 EYVVVPAKQVYKIPDNLSFEEAALAEPLSCAVHGLDLLGIKPGDSVLVFGAGPIGLLLAQ 177

Query: 200 GARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259
             +  GA R+ + + ++ +L +AK+LGA   V          E+ E  ++    G DV  
Sbjct: 178 LLKLNGASRVTVAEPNEEKLELAKKLGATETV------DPSREDPEAQKEDNPYGFDVVI 231

Query: 260 DCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIY 305
           +  G  KT+  A+   R GG V + G+   +  V ++P    + I+
Sbjct: 232 EATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISP----FEIF 273

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score =  227 bits (581), Expect = 2e-72
 Identities = 111/281 (39%), Positives = 153/281 (54%), Gaps = 24/281 (8%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVH-YLKTLRCAD---FVVKE-- 73
           AA   G   ++++    P + P +V +++   GICGSD+H YL      D   F+  E  
Sbjct: 3   AARYHGRKDIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYL------DGPIFIPTEGH 56

Query: 74  --------PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE 125
                   P+ +GHE +GV+ +VGS V     GDRV +EP I C  C  CK G YNLC  
Sbjct: 57  PHLTGETAPVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDS 116

Query: 126 MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNV 185
           + F       G  A  VV PA    KLPDNV LEE A+ EPL+V  HA RR+   P    
Sbjct: 117 LGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALVEPLAVAWHAVRRSGFKPGDTA 176

Query: 186 LIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVE 245
           L++GAGPIGL+T+L  +A GA +I++ +  + R  +A+ELGA  ++  +    D+  EV 
Sbjct: 177 LVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTE--VDVVAEVR 234

Query: 246 KIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 286
           K+    G G+DVSFDCAG   T+ TA+ A R  G    V +
Sbjct: 235 KLTG--GGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAI 273

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score =  224 bits (573), Expect = 2e-71
 Identities = 103/273 (37%), Positives = 152/273 (55%), Gaps = 17/273 (6%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
           AA L G N ++++   +P  GP +VLV+++A GICG+DV   K +R     +K P ++GH
Sbjct: 3   AAVLHGPNDVRLEEVPVPEPGPGEVLVKVRACGICGTDV---KKIRGGHTDLKPPRILGH 59

Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK--FFATPPVHGS 137
           E AG I +VG  V     GDRV + P + C  C +C  G  N+CP  K          G 
Sbjct: 60  EIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYD---GG 116

Query: 138 LANQVVHPA-----DLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGP 192
            A  V  PA         KLPDNVS EE A+ EPL+  ++A R+A I P   VL++GAGP
Sbjct: 117 FAEYVRVPAWAVKRGGVLKLPDNVSFEEAALVEPLACCINAQRKAGIKPGDTVLVIGAGP 176

Query: 193 IGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG 252
           IGL+  + A+A GA ++++ D++++RL  AK+LGAD  +  +   +D+ E+V ++    G
Sbjct: 177 IGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAE--EDLVEKVRELTD--G 232

Query: 253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG 285
            G DV     G  +  + AL   R GG++   G
Sbjct: 233 RGADVVIVATGSPEAQAQALELVRKGGRILFFG 265

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  214 bits (547), Expect = 2e-68
 Identities = 93/268 (34%), Positives = 140/268 (52%), Gaps = 19/268 (7%)

Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVA 102
           +VLVR++A G+CG+D+H  +         K P+++GHE AGV+ +VG  V  +  GDRV 
Sbjct: 1   EVLVRVEAAGLCGTDLHIRRGGY--PPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVV 58

Query: 103 LEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA 162
           + P + C  C+ C+                 + G  A  VV PAD    LPD +SLEE A
Sbjct: 59  VLPNLGCGTCELCRE-----LCPGGGILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAA 113

Query: 163 M-CEPLSVGLHACRRAN-IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS 220
           +  EPL+   HA RRA  + P   VL++GAG +GL+    A+A GA R+++ D  D +L 
Sbjct: 114 LLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLE 172

Query: 221 VAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGK 280
           +AKELGAD+++             E+++   G G DV  D  G  +T++ AL   R GG+
Sbjct: 173 LAKELGADHVIDYKEED-----LEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGR 227

Query: 281 VCLVGMGHLEMTVPLTPAAARYLIYSFL 308
           + +VG      +        R L++  L
Sbjct: 228 IVVVGG----TSGGPPLDDLRRLLFKEL 251

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score =  209 bits (534), Expect = 1e-65
 Identities = 105/271 (38%), Positives = 152/271 (56%), Gaps = 14/271 (5%)

Query: 26  VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVI 85
              L++     P  G  +VLVR+K VGICGSD+H        +     P ++GHE +G +
Sbjct: 9   PGRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLH---IYHGRNPFASYPRILGHELSGEV 65

Query: 86  EKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH--GSLANQVV 143
            +VG  V  L  GDRV ++P ISC  C  C+ GR N C  ++      VH  G  A  +V
Sbjct: 66  VEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLG---VHRDGGFAEYIV 122

Query: 144 HPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARA 203
            PAD    +P+ +SL++ A+ EPL++G HA RRA +     VL++GAGPIGL  +  A+A
Sbjct: 123 VPAD-ALLVPEGLSLDQAALVEPLAIGAHAVRRAGVTAGDTVLVVGAGPIGLGVIQVAKA 181

Query: 204 FGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 263
            GA R+++VD+DD RL  A+ELGAD+ + V    +D+A  + ++    G G DV  D  G
Sbjct: 182 RGA-RVIVVDIDDERLEFARELGADDTINVGD--EDVAARLREL--TDGEGADVVIDATG 236

Query: 264 FNKTMSTALSATRAGGKVCLVGMGHLEMTVP 294
              +M  A+     GG+V LVG+    +T P
Sbjct: 237 NPASMEEAVELVAHGGRVVLVGLSKGPVTFP 267

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score =  203 bits (519), Expect = 9e-64
 Identities = 103/262 (39%), Positives = 148/262 (56%), Gaps = 14/262 (5%)

Query: 30  KIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG 89
           +++    P  GP +VL+++ A GICGSD+H     +     V+ P+V+GHE +G I +VG
Sbjct: 15  ELREVPEPEPGPGEVLIKVAAAGICGSDLH---IYKGDYDPVETPVVLGHEFSGTIVEVG 71

Query: 90  SEVKTLVPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL 148
            +V+    GDRV  E    +C RC +C+ G YNLCP  K   T    G  A  V+ P + 
Sbjct: 72  PDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQ-ADGGFAEYVLVPEES 130

Query: 149 CFKLPDNVSLEEGAMCEPLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAP 207
             +LP+N+SLE  A+ EPL+V +HA   R+ I P   V++ G GPIGL+    A+  GA 
Sbjct: 131 LHELPENLSLEAAALTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA- 189

Query: 208 RIVIVDV--DDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFN 265
            +V+V    D+ RL VAKELGAD    V+   +D+AE V +I    G G DV  +C+G  
Sbjct: 190 TVVVVGTEKDEVRLDVAKELGAD---AVNGGEEDLAELVNEITD--GDGADVVIECSGAV 244

Query: 266 KTMSTALSATRAGGKVCLVGMG 287
             +  AL   R GG++  VG+ 
Sbjct: 245 PALEQALELLRKGGRIVQVGIF 266

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score =  191 bits (488), Expect = 1e-58
 Identities = 97/275 (35%), Positives = 140/275 (50%), Gaps = 17/275 (6%)

Query: 20  AAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG 78
           A   LG   + ++    P + GP+D +VR+ A  ICGSD+H     R      K  M++G
Sbjct: 3   ALVYLGPGKIGLEEVPDPKIQGPHDAIVRVTATSICGSDLH---IYRGGVPGAKHGMILG 59

Query: 79  HECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLC----PEMKFFATPPV 134
           HE  G + +VGS+VK L PGDRV++     C RC  C+ G +  C       K       
Sbjct: 60  HEFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRID- 118

Query: 135 HGSLANQVVHP-ADL-CFKLPDNVSLEEGAMC-EPLSVGLHACRRANIGPETNVLIMGAG 191
            G  A  V  P AD+   K+PD +  E+  M  + L  G H    A I P + V ++GAG
Sbjct: 119 -GGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGAELAGIKPGSTVAVIGAG 177

Query: 192 PIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251
           P+GL  + GAR  GA RI+ VD +  RL +AKE GA +I  ++    DI E++ ++    
Sbjct: 178 PVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDI--INPKNGDIVEQILELTG-- 233

Query: 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 286
           G G+D   +  GF +T   A+   R GG +  VG+
Sbjct: 234 GRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGV 268

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score =  186 bits (475), Expect = 9e-57
 Identities = 101/299 (33%), Positives = 149/299 (49%), Gaps = 18/299 (6%)

Query: 19  MAAWLL---GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYL-KTLRCADFVVKEP 74
           M AW         L ++   +P  GP +VLV++KA G+C SD+H L   +     + K P
Sbjct: 1   MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVP---TLTKLP 57

Query: 75  MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 134
           + +GHE AG + +VG+ V     GDRVA+   I C  C  C+ GR NLC          +
Sbjct: 58  LTLGHEIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGL-GI 116

Query: 135 HGSLANQVVHPADLCFKLPDNVSLEEGA-MCEPLSVGLHAC-RRANIGPETNVLIMGAGP 192
            G  A  +V PA     +PD V   + A   + +    HA  R   + P   VL++G G 
Sbjct: 117 DGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGG 176

Query: 193 IGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG 252
           +GL  +  A+A GA  ++ VD+ + +L +AKELGAD   +V  +L D     +K    +G
Sbjct: 177 LGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGAD---EVLNSLDDSP--KDKKAAGLG 230

Query: 253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF 311
            G DV FD  G   T   A  A + GG++ +VG+G  ++TV L+   AR L    +  F
Sbjct: 231 GGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIAREL--RIIGSF 287

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score =  181 bits (463), Expect = 1e-54
 Identities = 99/301 (32%), Positives = 136/301 (45%), Gaps = 32/301 (10%)

Query: 20  AAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG 78
           AA L  V   L+I+  EL   GP +VLVR+ A G+C SD+H +      D     P V+G
Sbjct: 3   AAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVT----GDLPAPLPAVLG 58

Query: 79  HECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE------MKFFATP 132
           HE AGV+E+VG  V  + PGD V L    +C  C +C  G+ NLC         +     
Sbjct: 59  HEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGT 118

Query: 133 PVH-------------GSLANQVVHPADLCFKLPDNVSLEEGAM---CEPLSVGLHACRR 176
                           G+ A   V P     K+ D++ L+  A+        VG      
Sbjct: 119 RRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVG-AVVNT 177

Query: 177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTN 236
           A + P   V ++G G +GL  + GAR  GA RI+ VD    +L +A+  GA + V  S  
Sbjct: 178 ARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASE- 236

Query: 237 LQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLT 296
             D  E V  +    G G D +F+  G   T+  AL+ TR GG   +VGMG    TV L 
Sbjct: 237 -DDAVEAVRDLTD--GRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLP 293

Query: 297 P 297
            
Sbjct: 294 A 294

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score =  180 bits (459), Expect = 2e-54
 Identities = 88/259 (33%), Positives = 139/259 (53%), Gaps = 10/259 (3%)

Query: 37  PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96
           P  GP DVL+++K   ICG+DVH       A   +  PMV+GHE  G + +VGSEV    
Sbjct: 21  PEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK 80

Query: 97  PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH--GSLANQVVHPADLCFKLPD 154
            GDRV+ E  I C  C +C+ GR +LC   K      V+  G+ A  +V PA   +K+PD
Sbjct: 81  VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVG---VNRPGAFAEYLVIPAFNVWKIPD 137

Query: 155 NVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV 214
           ++  +  A+ +P    +H     ++  E  VLI GAGPIG++    A+  GA  +VI DV
Sbjct: 138 DIPDDLAAIFDPFGNAVHTALSFDLVGED-VLITGAGPIGIMAAAVAKHVGARHVVITDV 196

Query: 215 DDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSA 274
           ++YRL +A+++GA   V V+   +D+ + + ++   M  G DV  + +G        L  
Sbjct: 197 NEYRLELARKMGATRAVNVAK--EDLRDVMAEL--GMTEGFDVGLEMSGAPSAFRQMLDN 252

Query: 275 TRAGGKVCLVGMGHLEMTV 293
              GG++ ++G+   +M +
Sbjct: 253 MNHGGRIAMLGIPPGDMAI 271

Length = 341

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score =  178 bits (454), Expect = 1e-53
 Identities = 90/273 (32%), Positives = 143/273 (52%), Gaps = 25/273 (9%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF-VVKEPMVIGHECAGVIEK 87
           L+I+   +P  GP +VL++++A G+C +D+H  K     D+ V K P++ GHE  G + +
Sbjct: 16  LEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAK----GDWPVPKLPLIPGHEIVGTVVE 71

Query: 88  VGSEVKTLVPGDRVALE-PGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA 146
           VG  V  L  GDRV +    ISC  C++C+ G  NLCP  +        G  A  VV PA
Sbjct: 72  VGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPN-QKITGYTTDGGYAEYVVVPA 130

Query: 147 DLCFKLPDNVSLEEGAMCEPLS-VGL---HACRRANIGPETNVLIMGAGPIGLVTMLGAR 202
               K+P+ + L E A   PL   G+    A ++AN+ P   V ++GAG +G + +  A+
Sbjct: 131 RYVVKIPEGLDLAEAA---PLLCAGITTYRALKKANVKPGKWVAVVGAGGLGHMAVQYAK 187

Query: 203 AFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 262
           A GA  ++ +   + +L +AK+LGAD++  ++++  D  E V++I        D   D  
Sbjct: 188 AMGA-EVIAITRSEEKLELAKKLGADHV--INSSDSDALEAVKEI-------ADAIIDTV 237

Query: 263 GFNKTMSTALSATRAGGKVCLVGMGHLEMTVPL 295
           G   T+  +L A R GG + LVG+        L
Sbjct: 238 G-PATLEPSLKALRRGGTLVLVGLPGGGPIPLL 269

Length = 339

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score =  177 bits (452), Expect = 2e-53
 Identities = 99/303 (32%), Positives = 149/303 (49%), Gaps = 22/303 (7%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
            A   G  T++++ F +P  GP +VL+R+KA G+CGSD+HY            + ++ GH
Sbjct: 3   GAVFPGDRTVELREFPVPVPGPGEVLLRVKASGLCGSDLHYY--YHGHRAPAYQGVIPGH 60

Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLA 139
           E AGV+  VG  V     GDRV +   + C  C +C+ G   LC   +        G  A
Sbjct: 61  EPAGVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHA 120

Query: 140 NQVVHPADLCFKLPDNVSLEEGAMCEPLSVGL----HACRRANIGPETNVLIMGAGPIGL 195
             ++ P      LPD++S  +GA+   L  G+    HA RR  +     VL++GAGP+GL
Sbjct: 121 EYMLVPEKTLIPLPDDLSFADGAL---LLCGIGTAYHALRRVGVSGRDTVLVVGAGPVGL 177

Query: 196 VTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 255
             ++ ARA GA  ++ VD    RL +AK LGAD ++      QD  +E+ ++    G G 
Sbjct: 178 GALMLARALGAEDVIGVDPSPERLELAKALGADFVINS---GQDDVQEIRELTS--GAGA 232

Query: 256 DVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAA-----RYLIYSFLFH 310
           DV+ +C+G       AL A R  G++ LVG G     + +  +       R LI S+ F 
Sbjct: 233 DVAIECSGNTAARRLALEAVRPWGRLVLVGEGG---ELTIEVSNDLIRKQRTLIGSWYFS 289

Query: 311 FFL 313
              
Sbjct: 290 VPD 292

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score =  175 bits (446), Expect = 2e-52
 Identities = 85/267 (31%), Positives = 134/267 (50%), Gaps = 19/267 (7%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L+++   +P  GP  VLVR+   G+C SD+H +  +       K P  +GHE AG +E+V
Sbjct: 13  LRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEV 72

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV--HGSLANQVVHPA 146
           GS V  L  GD V + P   C  C +C+ G  N C   +F   P +   G  A  ++ P+
Sbjct: 73  GSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARF---PGIGTDGGFAEYLLVPS 129

Query: 147 DLCFKLPDNVSLEEGAMCEPLS-VGL---HACRRAN--IGPETNVLIMGAGPIGLVTMLG 200
               KLP  +   E A   PL+  GL   HA ++A   + P + V+++G G +G + +  
Sbjct: 130 RRLVKLPRGLDPVEAA---PLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQI 186

Query: 201 ARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260
            RA     ++ VD  +  L +A+ LGAD+++  S    D+ EEV ++    G G D   D
Sbjct: 187 LRALTPATVIAVDRSEEALKLAERLGADHVLNASD---DVVEEVRELTG--GRGADAVID 241

Query: 261 CAGFNKTMSTALSATRAGGKVCLVGMG 287
             G ++T++ A      GG+  +VG G
Sbjct: 242 FVGSDETLALAAKLLAKGGRYVIVGYG 268

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score =  171 bits (435), Expect = 6e-51
 Identities = 94/288 (32%), Positives = 147/288 (51%), Gaps = 21/288 (7%)

Query: 11  KEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFV 70
           K         A L  V         +P  GP +VL+++ A  ICG+DVH       A   
Sbjct: 4   KTKPGY---GAELTEV--------PVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSR 52

Query: 71  VKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA 130
           +K P V+GHE AG +  +G  V+ +  GD V++E  I C +C  C+ G+Y++C   K F 
Sbjct: 53  IKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFG 112

Query: 131 --TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIM 188
             T    G  A   V PA   +K P ++  E   + EPL   +H      I  ++ VL+ 
Sbjct: 113 VDTD---GCFAEYAVVPAQNIWKNPKSIPPEYATIQEPLGNAVHTVLAGPISGKS-VLVT 168

Query: 189 GAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQ 248
           GAGPIGL+ +  A+A GA  +++ D ++YRL +AK++GA  +V      +D+ +EV  + 
Sbjct: 169 GAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK--EDVVKEVADL- 225

Query: 249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLT 296
              G G+DV  + +G  K +   L A   GG+V L+G+   ++T+  T
Sbjct: 226 -TDGEGVDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGKVTIDFT 272

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score =  170 bits (433), Expect = 1e-50
 Identities = 85/259 (32%), Positives = 137/259 (52%), Gaps = 11/259 (4%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
            ++    +P  GP +VL+++ A  ICG+DVH  +    A   +K P++ GHE AG + +V
Sbjct: 13  AELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEV 72

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH--GSLANQVVHPA 146
           G  V  +  GD V+ E  I C +C  C+ G Y++C   K      V   G  A  VV P 
Sbjct: 73  GEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILG---VDTDGCFAEYVVVPE 129

Query: 147 DLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA 206
           +  +K   ++  E  ++ EPL   +H     ++    +VLI G GPIGL+ +  A+A GA
Sbjct: 130 ENLWKNDKDIPPEIASIQEPLGNAVHTVLAGDV-SGKSVLITGCGPIGLMAIAVAKAAGA 188

Query: 207 PRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNK 266
             ++  D + YRL +AK++GAD ++      +D+  EV+ +    GTG+DV  + +G  K
Sbjct: 189 SLVIASDPNPYRLELAKKMGADVVINPRE--EDVV-EVKSVTD--GTGVDVVLEMSGNPK 243

Query: 267 TMSTALSATRAGGKVCLVG 285
            +   L A   GG+V ++G
Sbjct: 244 AIEQGLKALTPGGRVSILG 262

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score =  169 bits (430), Expect = 6e-50
 Identities = 93/290 (32%), Positives = 132/290 (45%), Gaps = 18/290 (6%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
           A  +LG+  +      +P  GP D +VR  AV  C SDVH   T+       +  M++GH
Sbjct: 3   AFAMLGIGKVGWIEKPIPVCGPNDAIVRPTAVAPCTSDVH---TVWGGAPGERHGMILGH 59

Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPPVH 135
           E  GV+E+VGSEVK   PGDRV +      WR    + G  +    M    KF  +    
Sbjct: 60  EAVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKF--SNFKD 117

Query: 136 GSLANQV-VHPADLCF-KLPDNVSLEEGAMC-EPLSVGLHACRRANIGPETNVLIMGAGP 192
           G  A    V+ AD     LPD ++ E+  M  + +S G H    ANI     V + G GP
Sbjct: 118 GVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFHGAELANIKLGDTVAVFGIGP 177

Query: 193 IGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG 252
           +GL+ + GAR  GA RI+ V     R+ +AKE GA +IV       D+ E++ K+    G
Sbjct: 178 VGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKN--GDVVEQILKLTG--G 233

Query: 253 TGIDVSFDCAGFNKTMSTALSATRAGGKV-CLVGMGH-LEMTVPLTPAAA 300
            G+D      G   T   AL   + GG +  +   G    + +P      
Sbjct: 234 KGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGV 283

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional

 Score =  167 bits (426), Expect = 1e-49
 Identities = 87/249 (34%), Positives = 124/249 (49%), Gaps = 13/249 (5%)

Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVA 102
             LV++   GICGSD+HY +  +  +FV+K PMV+GHE  G I    S+   L  G  VA
Sbjct: 29  GTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVH--SDSSGLKEGQTVA 86

Query: 103 LEPGISCWRCDHCKGGRYNLCPEMKFFA----TPPVHGSLANQVVHPADLCFKLPDNVSL 158
           + P   C  C +C     N C  M+FF      P V G      V     C   P+    
Sbjct: 87  INPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADE 146

Query: 159 EEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYR 218
           +  A  EPL+V +HA  +A       V + G GPIG + +   +  GA  IV  DV    
Sbjct: 147 KVMAFAEPLAVAIHAAHQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRS 206

Query: 219 LSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG 278
           LS+A+E+GAD +V    N Q+  ++++  +   G   DVSF+ +G   +++T L  TRA 
Sbjct: 207 LSLAREMGADKLV----NPQN--DDLDHYKAEKGY-FDVSFEVSGHPSSINTCLEVTRAK 259

Query: 279 GKVCLVGMG 287
           G +  VGMG
Sbjct: 260 GVMVQVGMG 268

Length = 343

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score =  167 bits (426), Expect = 3e-49
 Identities = 90/294 (30%), Positives = 126/294 (42%), Gaps = 40/294 (13%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             ++  EL    P +VLVR+ A GIC +D+     +R        P V+GHE AGV+E V
Sbjct: 15  FVLEDVELDDPRPDEVLVRIVATGICHTDLV----VRDGGLPTPLPAVLGHEGAGVVEAV 70

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM---KFFAT-------------P 132
           GS V  L PGD V L    SC  C +C  G    C       F                 
Sbjct: 71  GSAVTGLKPGDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGT 129

Query: 133 PVHG------SLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHA-----CRRANIGP 181
           PVHG      S A   V       K+  +V LE  A   PL  G+              P
Sbjct: 130 PVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLA---PLGCGIQTGAGAVLNVLKPRP 186

Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
            +++ + GAG +GL  ++ A+  G   I+ VD+ D RL +AKELGA +++      +D+ 
Sbjct: 187 GSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINPKE--EDL- 243

Query: 242 EEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPL 295
             V  I++  G G+D + D  G    +  A+ A    G + LVG       V L
Sbjct: 244 --VAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTL 295

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score =  165 bits (421), Expect = 1e-48
 Identities = 97/301 (32%), Positives = 134/301 (44%), Gaps = 30/301 (9%)

Query: 18  NMAAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMV 76
             AA L G    L+I+   LP L P  VLVR++  G+CGSDVH   T+      V  P++
Sbjct: 1   ARAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVH---TVAGRRPRVPLPII 57

Query: 77  IGHECAGVIEKVGSEVKT------LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF- 129
           +GHE  G +  +G  V T      L  GDRV    G  C RC  C  G    C   K + 
Sbjct: 58  LGHEGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYG 117

Query: 130 -----ATPPVHGSLANQVVHPADLCF-KLPDNVSLE--EGAMCEPLSVGLHACRRAN-IG 180
                  P + G  A  +  P      ++PDNV  E    A C  L+  L A  RA  +G
Sbjct: 118 HEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANC-ALATVLAALDRAGPVG 176

Query: 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI 240
               V++ GAGP+GL  +  A+  GA R++++D    RL +A+E GAD  + +       
Sbjct: 177 AGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDE----- 231

Query: 241 AEEVEKIQKAM----GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLT 296
             + ++         G G DV  + +G    +   L   R GG   LVG      TVPL 
Sbjct: 232 LPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLD 291

Query: 297 P 297
           P
Sbjct: 292 P 292

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score =  162 bits (412), Expect = 3e-47
 Identities = 87/294 (29%), Positives = 131/294 (44%), Gaps = 34/294 (11%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L+I+  +L      +VLVR+ A G+C +D H L       F    P V+GHE AG++E V
Sbjct: 15  LEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEGF----PAVLGHEGAGIVEAV 70

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT----------------- 131
           G  V ++ PGD V L     C +C  C  G+ NLC      AT                 
Sbjct: 71  GEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLC--EAIRATQGKGTMPDGTTRLSGNG 128

Query: 132 -PPVH----GSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHACRRANIGPETN 184
            P  H     + A   V       K+  +  LE+  +  C   +        A + P   
Sbjct: 129 VPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDT 188

Query: 185 VLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEV 244
           V + G G +GL  + GA+A GA RI+ VD++  +L +AK+ GA + V    N +++ + V
Sbjct: 189 VAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFV----NPKEVDDVV 244

Query: 245 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPA 298
           E I +    G D +F+C G  + M  AL AT  GG   ++G+      +   P 
Sbjct: 245 EAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPF 298

Length = 366

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score =  158 bits (401), Expect = 9e-46
 Identities = 93/276 (33%), Positives = 132/276 (47%), Gaps = 18/276 (6%)

Query: 40  GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGD 99
            P D +V++ A  ICGSD+H  +             V+GHE  G + +VG EV+TL  GD
Sbjct: 24  DPTDAIVKVTAAAICGSDLHIYR----GHIPSTPGFVLGHEFVGEVVEVGPEVRTLKVGD 79

Query: 100 RVALEPGISCWRCDHCKGGRYNLCPEMKFF---ATPPVHGSLANQVVHP-ADL-CFKLPD 154
           RV     I+C  C +C+ G+   C +   F    +P + G+ A  V  P AD    KLPD
Sbjct: 80  RVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPD 139

Query: 155 NVSLEEG-AMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVD 213
            +S E    + + L  G    +RA + P   V ++G GP+GL  +L A+  GA R+  VD
Sbjct: 140 GLSDEAALLLGDILPTGYFGAKRAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVD 199

Query: 214 VDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM-GTGIDVSFDCAGFNKTMSTAL 272
               RL  A  LGA+ I     N +D AE VE++++A  G G DV  +  G    +  A 
Sbjct: 200 PVPERLERAAALGAEPI-----NFED-AEPVERVREATEGRGADVVLEAVGGAAALDLAF 253

Query: 273 SATRAGGKVCLVGMGHLE-MTVPLTPAAARYLIYSF 307
              R GG +  VG+   E    P   A  + L   F
Sbjct: 254 DLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRF 289

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score =  148 bits (376), Expect = 3e-42
 Identities = 88/262 (33%), Positives = 134/262 (51%), Gaps = 23/262 (8%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L+I+    P  GP +VL+++KA G+C  D+ + K         K P+++GHE  G +E+V
Sbjct: 13  LQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPR---GKYPLILGHEIVGTVEEV 69

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL 148
           G  V+   PGDRV L   I C +C++C  G  NLC     +    V G  A  V  P   
Sbjct: 70  GEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGE-EVDGGFAEYVKVPERS 128

Query: 149 CFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGP---IGLVTMLGARA 203
             KLPDNVS E  A   C  +   +HA +RA +     VL+ GAG    I  + +  A+A
Sbjct: 129 LVKLPDNVSDESAALAAC-VVGTAVHALKRAGVKKGDTVLVTGAGGGVGIHAIQL--AKA 185

Query: 204 FGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 263
            GA R++ V     +L + KELGAD ++    +    +E+V+K+      G DV  +  G
Sbjct: 186 LGA-RVIAVTRSPEKLKILKELGADYVI----DGSKFSEDVKKL-----GGADVVIELVG 235

Query: 264 FNKTMSTALSATRAGGKVCLVG 285
            + T+  +L +   GG++ L+G
Sbjct: 236 -SPTIEESLRSLNKGGRLVLIG 256

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score =  148 bits (376), Expect = 5e-42
 Identities = 90/295 (30%), Positives = 137/295 (46%), Gaps = 23/295 (7%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYL---------KTLRCADFVVKEPMVIGH 79
           L+    + P     +VLV++ A G+C SD+H           KT+   D  VK P+V+GH
Sbjct: 13  LEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGH 72

Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLA 139
           E  G +  VG +   +  GD+V + P I C  C  C  G  NLC + +        G  A
Sbjct: 73  EIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQ-DGGYA 131

Query: 140 NQVVHPADLCFKLPDNVSLEEGAMCEPLSVGL---HACRRAN-IGPETNVLIMGAGPIGL 195
             V+ P       P  +     A     S GL    A ++   +  +  V+I+GAG +GL
Sbjct: 132 EYVIVPHSRYLVDPGGLDPALAATL-ACS-GLTAYSAVKKLMPLVADEPVVIIGAGGLGL 189

Query: 196 VTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 255
           + +   +A G   I++VD+D+ +L  AK  GAD +V    N  D  +  ++I KA G G+
Sbjct: 190 MALALLKALGPANIIVVDIDEAKLEAAKAAGADVVV----NGSD-PDAAKRIIKAAGGGV 244

Query: 256 DVSFDCAGFNKTMSTALSATRAGGKVCLVGM--GHLEMTVPLTPAAARYLIYSFL 308
           D   D    + T S A      GGK+ LVG+  G   + +PL P  A  +  S++
Sbjct: 245 DAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYV 299

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  147 bits (374), Expect = 8e-42
 Identities = 91/281 (32%), Positives = 138/281 (49%), Gaps = 31/281 (11%)

Query: 20  AAWLL--GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF--VVKEPM 75
           AA +   G    +++   +P  GP +VLV+++A G+C +D+H        D+    K P+
Sbjct: 3   AAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAAL----GDWPVKPKLPL 58

Query: 76  VIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKFFA 130
           + GHE AGV+  VG  V  L  GDRV    G+     +C +C++C+ G   LCP  K  +
Sbjct: 59  IGGHEGAGVVVAVGPGVSGLKVGDRV----GVKWLYDACGKCEYCRTGDETLCPNQK-NS 113

Query: 131 TPPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIM 188
              V G+ A   +  A     +PD +S E+ A  +C  ++V   A ++A + P   V+I 
Sbjct: 114 GYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTV-YKALKKAGLKPGDWVVIS 172

Query: 189 GAGPIGLVTMLG---ARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVE 245
           GAG  G +  LG   A+A G  R++ +DV D +L +AKELGAD  V       D  E V+
Sbjct: 173 GAG--GGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVDFKK--SDDVEAVK 227

Query: 246 KIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 286
           ++    G G       A        AL   R GG +  VG+
Sbjct: 228 EL--TGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGL 266

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score =  148 bits (376), Expect = 1e-41
 Identities = 88/292 (30%), Positives = 128/292 (43%), Gaps = 57/292 (19%)

Query: 41  PYDVLVRMKAVGICGSDVH----YLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96
           P D +VR+ A  ICGSD+H    Y+  +       K+  ++GHE  GV+E+VG EV+ L 
Sbjct: 25  PTDAIVRVTATAICGSDLHLYHGYIPGM-------KKGDILGHEFMGVVEEVGPEVRNLK 77

Query: 97  PGDRVALEPGISCWRCDHCKGGRYNLC------PEMK---------FF----ATPPVHGS 137
            GDRV +   I+C  C +CK G Y+ C       EM           F     T    G 
Sbjct: 78  VGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGG 137

Query: 138 LANQVVHP-ADL-CFKLPDNVSLEEGA-MCEPLSVGLHACRRANIGPETNVLIMGAGPIG 194
            A  V  P AD+  FK+PD++S E+   + + L  G HA   A + P   V + G GP+G
Sbjct: 138 QAEYVRVPFADVGPFKIPDDLSDEKALFLSDILPTGYHAAELAEVKPGDTVAVWGCGPVG 197

Query: 195 LVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTG 254
           L     A+  GA R++ +D    RL +A+       +     + D+ E + ++    G G
Sbjct: 198 LFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETINF-EEVDDVVEALRELTG--GRG 254

Query: 255 IDVSFDCAGFN-------KTMST--------------ALSATRAGGKVCLVG 285
            DV  D  G         K                  A+ A R GG V ++G
Sbjct: 255 PDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIG 306

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score =  144 bits (365), Expect = 2e-40
 Identities = 88/273 (32%), Positives = 132/273 (48%), Gaps = 35/273 (12%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L+I+    P   P  V+V ++A G+C SD H     +  D  V  P V GHE AGV+ +V
Sbjct: 13  LEIREVPDPEPPPDGVVVEVEACGVCRSDWH---GWQGHDPDVTLPHVPGHEFAGVVVEV 69

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPP---VHGSLANQV-VH 144
           G +V     GDRV +   + C  C +C+ G  N+C         P     GS A  V V 
Sbjct: 70  GEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQ----VQPGFTHPGSFAEYVAVP 125

Query: 145 PADL-CFKLPDNVSLEEGAMCEPLSVGLHACR----------RANIGPETNVLIMGAGPI 193
            AD+   +LPD+V     A      +G   CR          +A + P   V + G G +
Sbjct: 126 RADVNLVRLPDDVDFVTAA-----GLG---CRFATAFRALVHQARVKPGEWVAVHGCGGV 177

Query: 194 GLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT 253
           GL  ++ A A GA R++ VD+DD +L +A+ELGA   V  ++ ++D+A  V  +    G 
Sbjct: 178 GLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVN-ASEVEDVAAAVRDL---TGG 232

Query: 254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 286
           G  VS D  G  +T   ++++ R  G+   VG+
Sbjct: 233 GAHVSVDALGIPETCRNSVASLRKRGRHVQVGL 265

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family

 Score =  144 bits (364), Expect = 2e-40
 Identities = 77/264 (29%), Positives = 137/264 (51%), Gaps = 20/264 (7%)

Query: 30  KIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFV---------VKEPMVIGHE 80
           +++   +P  GP ++LV+++A GIC  D   +K    A            VK PM+ GHE
Sbjct: 13  RLEEVPVPRPGPGEILVKVEACGICAGD---IKCYHGAPSFWGDENQPPYVKPPMIPGHE 69

Query: 81  CAGVIEKVGSEVKT--LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA-TPPVHGS 137
             G + ++G   +   +  GDRV  E  + CW C  C  G+Y +C +   +     V+G 
Sbjct: 70  FVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGG 129

Query: 138 LANQVVHPAD-LCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLV 196
           +A  +  P + +  K+PD++  E+  + EPL+  LHA  RANI  +  V++ GAGP+GL 
Sbjct: 130 MAEYMRFPKEAIVHKVPDDIPPEDAILIEPLACALHAVDRANIKFDDVVVLAGAGPLGLG 189

Query: 197 TMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 256
            +  AR     +++++D+ D RL++A++ GAD ++       D+ E+++++    G G D
Sbjct: 190 MIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPPE--VDVVEKIKELTG--GYGCD 245

Query: 257 VSFDCAGFNKTMSTALSATRAGGK 280
           +  +  G    +   L+  R  G+
Sbjct: 246 IYIEATGHPSAVEQGLNMIRKLGR 269

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350

>gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional

 Score =  143 bits (363), Expect = 3e-40
 Identities = 87/269 (32%), Positives = 136/269 (50%), Gaps = 35/269 (13%)

Query: 41  PYDVLVRMKAVGICGSDV--------HYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV 92
             DVLV++ + G+CGSD+        HY             P+ +GHE +G +E VGS V
Sbjct: 25  QDDVLVKVASSGLCGSDIPRIFKNGAHYY------------PITLGHEFSGYVEAVGSGV 72

Query: 93  KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKL 152
             L PGD VA  P + C+ C  C  G Y+LC +  F  +    G+    VV   +L F L
Sbjct: 73  DDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNL-FAL 131

Query: 153 PDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIV 212
           P ++ +E+GA  EP++VGLHA   A      NV+I+GAG IGL+ +  A A GA  +  +
Sbjct: 132 PTDMPIEDGAFIEPITVGLHAFHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAI 191

Query: 213 DVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD-----CAGFNKT 267
           D++  +L++AK LGA        N ++++    +IQ  +    ++ FD      AG  +T
Sbjct: 192 DINSEKLALAKSLGAMQTF----NSREMS--APQIQSVLR---ELRFDQLILETAGVPQT 242

Query: 268 MSTALSATRAGGKVCLVGMGHLEMTVPLT 296
           +  A+       ++ LVG  H ++ +   
Sbjct: 243 VELAIEIAGPRAQLALVGTLHHDLHLTSA 271

Length = 347

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score =  144 bits (364), Expect = 3e-40
 Identities = 83/295 (28%), Positives = 129/295 (43%), Gaps = 36/295 (12%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+  E+      +V +++ A G+C +D+H +            P+++GHE AG++E +
Sbjct: 13  LSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVID----GKLPTPLPVILGHEGAGIVESI 68

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V TL PGD+V    G  C +C  C   R NLC   K   T                 
Sbjct: 69  GPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLC--SKSRGTNGRGLMSDGTSRFTCKG 126

Query: 133 -PVH-----GSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHAC-RRANIGPET 183
            P+H      + A   V       K+  +  LE+  +  C   S G  A    A + P +
Sbjct: 127 KPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGC-GFSTGYGAAVNTAKVTPGS 185

Query: 184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEE 243
              + G G +GL  ++G +A GA RI+ VD++  +   AK+LGA   +      + I   
Sbjct: 186 TCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQDKPI--- 242

Query: 244 VEKIQKAMGTGIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHLEMTVPLTP 297
           VE + +    G+D +F+  G   T+  AL ATR  GG   +VG+        L P
Sbjct: 243 VEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDP 297

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score =  142 bits (361), Expect = 7e-40
 Identities = 90/270 (33%), Positives = 131/270 (48%), Gaps = 20/270 (7%)

Query: 25  GVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFV-VKEPMVIGHECA 82
           G   +  +    P++  P D +V+M    ICG+D+H LK     D   V    ++GHE  
Sbjct: 8   GPGKISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILK----GDVPTVTPGRILGHEGV 63

Query: 83  GVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQV 142
           GV+E+VGS V     GDRV +    SC  C +C+ G Y+ C    +     + G+ A  V
Sbjct: 64  GVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYV 123

Query: 143 VHP-ADLC-FKLPDNVSLEEGAMCEPLSVGL---HAC--RRANIGPETNVLIMGAGPIGL 195
             P AD   +KLP+ V  E   M   LS  L   + C      + P   V I+GAGP+GL
Sbjct: 124 RIPHADNSLYKLPEGVDEEAAVM---LSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGL 180

Query: 196 VTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 255
             +L A+ +   +I++VD+DD RL VAK+LGA + V  +    D  E+V ++    G G+
Sbjct: 181 AALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAK--GDAIEQVLELTD--GRGV 236

Query: 256 DVSFDCAGFNKTMSTALSATRAGGKVCLVG 285
           DV  +  G   T          GG +  VG
Sbjct: 237 DVVIEAVGIPATFELCQELVAPGGHIANVG 266

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score =  141 bits (357), Expect = 1e-39
 Identities = 80/267 (29%), Positives = 123/267 (46%), Gaps = 28/267 (10%)

Query: 28  TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK 87
            L+ +   +P  GP +VL++++A G+C +D+H            K P+V GHE  G + +
Sbjct: 11  PLEPEEVPVPEPGPGEVLIKIEACGVCHTDLH---AAEGDWGGSKYPLVPGHEIVGEVVE 67

Query: 88  VGSEVKTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKFFATPPVH-GSLANQ 141
           VG+ V+    GDRV    G+     SC RC++C+ G  NLC +     T     G  A  
Sbjct: 68  VGAGVEGRKVGDRV----GVGWLVGSCGRCEYCRRGLENLCQKAVN--TGYTTQGGYAEY 121

Query: 142 VVHPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTML 199
           +V  A+    LPD + L + A  +C  ++V   A R A   P   V ++G G +G + + 
Sbjct: 122 MVADAEYTVLLPDGLPLAQAAPLLCAGITV-YSALRDAGPRPGERVAVLGIGGLGHLAVQ 180

Query: 200 GARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259
            ARA G    V +     +  +A++LGAD +V         +      Q A G G DV  
Sbjct: 181 YARAMGF-ETVAITRSPDKRELARKLGADEVVD--------SGAELDEQAAAG-GADVIL 230

Query: 260 DCAGFNKTMSTALSATRAGGKVCLVGM 286
                      AL   R GG++ LVG+
Sbjct: 231 VTVVSGAAAEAALGGLRRGGRIVLVGL 257

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score =  141 bits (358), Expect = 3e-39
 Identities = 88/292 (30%), Positives = 131/292 (44%), Gaps = 31/292 (10%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+  EL   GP +VLV++ A G+C SD+  +   R        PM +GHE AGV+ +V
Sbjct: 21  LVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDR----PRPLPMALGHEAAGVVVEV 76

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCP----------------EMKFFATP 132
           G  V  L  GD V L    SC  C  C  GR  LC                  ++     
Sbjct: 77  GEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGE 136

Query: 133 PVH----GSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHACRRANIGPETNVL 186
             H     + A   V       K+  +V LE  A+  C  L+        A + P  +V 
Sbjct: 137 INHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVA 196

Query: 187 IMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEK 246
           ++G G +GL  +LGA A GA ++V VD+++ +L++A+ELGA   V            VE+
Sbjct: 197 VVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAGD-----PNAVEQ 251

Query: 247 IQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPA 298
           +++  G G+D +F+ AG    + TA   TR GG     G+   E  + +   
Sbjct: 252 VRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPAL 303

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score =  140 bits (355), Expect = 4e-39
 Identities = 81/276 (29%), Positives = 119/276 (43%), Gaps = 21/276 (7%)

Query: 19  MAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPM--- 75
           M A +     L ++    P  GP  VLV++ A GICGSD+H              P    
Sbjct: 1   MRAAVFRDGPLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMD 60

Query: 76  -----VIGHECAGVIEKVGSEV-KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 129
                V+GHE  G +   G    + L  G RV   P + C +   C  G     P     
Sbjct: 61  LGADIVLGHEFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAP----- 115

Query: 130 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMG 189
                 G  A  ++    L  ++PD +S+E+ A+ EPL+VGLHA RRA + P    L++G
Sbjct: 116 ------GGYAEYMLLSEALLLRVPDGLSMEDAALTEPLAVGLHAVRRARLTPGEVALVIG 169

Query: 190 AGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQK 249
            GPIGL  +   +A G   IV  D    R ++A  +GAD +V  + +    A   E  + 
Sbjct: 170 CGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARA 229

Query: 250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG 285
                  V F+C G    +   +     GG++ +VG
Sbjct: 230 GGPKP-AVIFECVGAPGLIQQIIEGAPPGGRIVVVG 264

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  139 bits (354), Expect = 5e-39
 Identities = 82/288 (28%), Positives = 125/288 (43%), Gaps = 43/288 (14%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L+   FE   LGP DV +++   G+C SD+H   TLR      K P+V GHE  G++  V
Sbjct: 12  LEPFTFERRPLGPDDVDIKITYCGVCHSDLH---TLRNEWGPTKYPLVPGHEIVGIVVAV 68

Query: 89  GSEVKTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKFFATPPV------HGS 137
           GS+V     GDRV    G+     SC  C+ CK G    CP+                G 
Sbjct: 69  GSKVTKFKVGDRV----GVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGG 124

Query: 138 LANQVVHPADLCFKLPDNVSLEEGA--MC------EPLSVGLHACRRANIGPETNVLIMG 189
            A+ +V      FK+P+ +     A  +C       PL       +R  +GP   V ++G
Sbjct: 125 YADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPL-------KRNGVGPGKRVGVVG 177

Query: 190 AGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQK 249
            G +G + +  A+A GA  +        +   A +LGAD  +          ++ E ++K
Sbjct: 178 IGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFI--------ATKDPEAMKK 228

Query: 250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTP 297
           A G+ +D+  D    +  +   LS  + GG + LVG     + VP  P
Sbjct: 229 AAGS-LDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFP 275

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score =  140 bits (354), Expect = 1e-38
 Identities = 87/283 (30%), Positives = 139/283 (49%), Gaps = 20/283 (7%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF----VVKEPMVIGHECAGV 84
           L+++   +P+L P ++L+R+KA GICGSD+H  +T +        + + P+VIGHE +GV
Sbjct: 39  LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGV 98

Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           +EK G  VK    GD V  E  + C  C  C+ G  N C  +K        G+ A  +  
Sbjct: 99  VEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGF-SADGAFAEYIAV 157

Query: 145 PADLCFKLPDNV-------SLEEGAMCEPLSVGLHAC--RRANIGPETNVLIMGAGPIGL 195
            A   +++ +         + E GA+ EP SV  +    R     P   V++ GAGPIGL
Sbjct: 158 NARYAWEINELREIYSEDKAFEAGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGL 217

Query: 196 VTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM-GTG 254
             +  A+A GA +++  ++ + R ++AKE+GAD +   +          EK+ +   G G
Sbjct: 218 AAIALAKAAGASKVIAFEISEERRNLAKEMGADYV--FNPTKMRDCLSGEKVMEVTKGWG 275

Query: 255 IDVSFDCAG-FNKTMSTALSATRAGGKVCLVGMGHLEMTVPLT 296
            D+  + AG    T+     +    GK+  V +G    TVPL 
Sbjct: 276 ADIQVEAAGAPPATIPQMEKSIAINGKI--VYIGRAATTVPLH 316

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score =  139 bits (352), Expect = 1e-38
 Identities = 89/262 (33%), Positives = 126/262 (48%), Gaps = 16/262 (6%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L+      P  GP +VLVR+KA  +   D+   + +      +  P ++G + AGV+E V
Sbjct: 15  LEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIK--LPLPHILGSDGAGVVEAV 72

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL 148
           G  V  + PG RV + PGISC RC++C  GR NLC +        V G  A  V  PA  
Sbjct: 73  GPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGE-HVDGGYAEYVAVPARN 131

Query: 149 CFKLPDNVSLEEGAMCEPLSVGLHACR----RANIGPETNVLIMGAGP-IGLVTMLGARA 203
              +PDN+S EE A   PL   L A      RA + P   VL+ GAG  +G   +  A+ 
Sbjct: 132 LLPIPDNLSFEEAA-AAPL-TFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKL 189

Query: 204 FGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 263
           FGA  I     +D +L  AKELGAD ++      +D   EV ++      G+DV  +  G
Sbjct: 190 FGATVIATAGSED-KLERAKELGADYVIDYRK--EDFVREVRELTG--KRGVDVVVEHVG 244

Query: 264 FNKTMSTALSATRAGGKVCLVG 285
              T   +L +   GG++   G
Sbjct: 245 -AATWEKSLKSLARGGRLVTCG 265

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score =  131 bits (332), Expect = 2e-38
 Identities = 50/110 (45%), Positives = 64/110 (58%), Gaps = 4/110 (3%)

Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVA 102
           +VLVR+KA GICGSD+H  +        VK P+++GHE AG++E+VG  V  L  GDRV 
Sbjct: 3   EVLVRVKAAGICGSDLHIYRG---EPPPVKLPLILGHEGAGIVEEVGPGVTGLKVGDRVV 59

Query: 103 LEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKL 152
           + P I C +C  C+ GR NLCP  KF     + G  A  VV PA     L
Sbjct: 60  VYPLIPCGKCAACREGRENLCPNGKFLGV-HLDGGFAEYVVVPARNLVPL 108

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score =  138 bits (350), Expect = 4e-38
 Identities = 91/296 (30%), Positives = 137/296 (46%), Gaps = 40/296 (13%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+   +P     ++L+R+ A G+C SD+H LK     +     P V+GHE +G + +V
Sbjct: 13  LTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLK----GELPFPPPFVLGHEISGEVVEV 68

Query: 89  GSEVK---TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA--------------- 130
           G  V+    L  GDRV     + C +C +C  G+ NLC    FFA               
Sbjct: 69  GPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCE--DFFAYNRLKGTLYDGTTRL 126

Query: 131 ----TPPVH----GSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHACRRAN-I 179
                 PV+    G LA   V PA     LP+++   E A+  C   +    A + A  +
Sbjct: 127 FRLDGGPVYMYSMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFT-AYGALKHAADV 185

Query: 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQD 239
            P   V ++G G +G   +  A+AFGA  I+ VDV D +L+ AKELGA +   V+   +D
Sbjct: 186 RPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHT--VNAAKED 243

Query: 240 IAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPL 295
               + +I    G G+DV  +  G  +T   AL   R GG+  +VG+     T  +
Sbjct: 244 AVAAIREI--TGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEI 297

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional

 Score =  134 bits (339), Expect = 7e-37
 Identities = 80/264 (30%), Positives = 127/264 (48%), Gaps = 19/264 (7%)

Query: 27  NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE 86
           N+L I+   +P     +V V++K  GICGSD H     R  +   K P VIGHE  GVI+
Sbjct: 10  NSLAIEERPIPQPAAGEVRVKVKLAGICGSDSH---IYRGHNPFAKYPRVIGHEFFGVID 66

Query: 87  KVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH--GSLANQVVH 144
            VG  V     G+RVA++P ISC  C  C  G+ N+C  +       VH  G  +   V 
Sbjct: 67  AVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLG---VHRDGGFSEYAVV 123

Query: 145 PADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTM-LGARA 203
           PA    ++PD ++ +   M EP ++  +   R     +   LI GAGP+GL  + +    
Sbjct: 124 PAKNAHRIPDAIADQYAVMVEPFTIAANVTGRTGPTEQDVALIYGAGPVGLTIVQVLKGV 183

Query: 204 FGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS--FDC 261
           +    +++ D  D RL++AKE GAD ++  +   + + E +E+       GI  +   D 
Sbjct: 184 YNVKAVIVADRIDERLALAKESGADWVINNAQ--EPLGEALEE------KGIKPTLIIDA 235

Query: 262 AGFNKTMSTALSATRAGGKVCLVG 285
           A     +  A++      ++ L+G
Sbjct: 236 ACHPSILEEAVTLASPAARIVLMG 259

Length = 339

>gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like

 Score =  132 bits (335), Expect = 3e-36
 Identities = 85/289 (29%), Positives = 140/289 (48%), Gaps = 22/289 (7%)

Query: 20  AAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG 78
           A  + G   ++++    P +  P D ++R+ A  +CGSD+   + +         P  IG
Sbjct: 3   ATVIHGPGDIRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPTR----APAPIG 58

Query: 79  HECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSL 138
           HE  GV+E+VGSEV ++ PGD V     IS   C  C+ G    C    F+    V G  
Sbjct: 59  HEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFW-GAFVDGGQ 117

Query: 139 ANQVVHP-AD-LCFKLPDNVSLEEG------AMCEPLSVGLHACRRANIGPETNVLIMGA 190
              V  P AD    K+P + S +E       A+ + +  G HA   A + P + V+++G 
Sbjct: 118 GEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMGTGHHAAVSAGVRPGSTVVVVGD 177

Query: 191 GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA 250
           G +GL  +L A+  GA RI+ +   + R ++A+E GA +IV      +   E V ++ + 
Sbjct: 178 GAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVA-----ERGEEAVARV-RE 231

Query: 251 M--GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTP 297
           +  G G D   +C G  ++M  A++  R GG+V  VG+ H  + + +  
Sbjct: 232 LTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRE 280

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score =  129 bits (326), Expect = 3e-35
 Identities = 73/251 (29%), Positives = 105/251 (41%), Gaps = 34/251 (13%)

Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
             P+ GP  VLVR++  G+CGSD+      R       EP   GHE  G +  +G  V+ 
Sbjct: 13  PRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRG 72

Query: 95  LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 154
           L  GDRVA   G                             G+ A   +  AD    LP 
Sbjct: 73  LAVGDRVAGLSG-----------------------------GAFAEYDLADADHAVPLPS 103

Query: 155 NVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV 214
                +    EPL   L+  RR  I     V ++GAG IGL+ +  A A GA R++ +D 
Sbjct: 104 L-LDGQAFPGEPLGCALNVFRRGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDR 162

Query: 215 DDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSA 274
              RL++A+ELGA  +V   +  + I E V ++    G G DV  +  G    +  A   
Sbjct: 163 RPARLALARELGATEVVTDDS--EAIVERVRELTG--GAGADVVIEAVGHQWPLDLAGEL 218

Query: 275 TRAGGKVCLVG 285
               G++ + G
Sbjct: 219 VAERGRLVIFG 229

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score =  130 bits (328), Expect = 7e-35
 Identities = 87/295 (29%), Positives = 131/295 (44%), Gaps = 37/295 (12%)

Query: 18  NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMV 76
             A    G   + ++    P +  P D +VR+    ICGSD+H  +         +  +V
Sbjct: 1   MKAVVYGGPGNVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYR----GRTGAEPGLV 56

Query: 77  IGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM---------K 127
           +GHE  G +E+VGS V++L  GDRV +   ++C RC +CK G   +C  +          
Sbjct: 57  LGHEAMGEVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYG 116

Query: 128 FFATPPVHGSLANQVVHP-ADL-CFKLPDNVSLEEGAMCEPLS----VGLHACRRANIGP 181
           +    P  G  A  +  P AD    KLPD    +E      LS     G H    A + P
Sbjct: 117 YVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLMLSDIFPTGWHGLELAGVQP 176

Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
              V + GAGP+GL+    A   GA R+ +VD    RL +A+ +GA  I     +  D  
Sbjct: 177 GDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAIPI-----DFSD-G 230

Query: 242 EEVEKIQKAMGTGIDVSFDCAGF-----------NKTMSTALSATRAGGKVCLVG 285
           + VE+I      G+D + DC G+           N  ++  +  TR GG + +VG
Sbjct: 231 DPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVG 285

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score =  127 bits (322), Expect = 2e-34
 Identities = 86/279 (30%), Positives = 122/279 (43%), Gaps = 40/279 (14%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE-PMVIGHECAG 83
           G   LK+     P  GP +VLVR+KA G+   DV      +     V+  P + G E AG
Sbjct: 11  GPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDV---LVRQGLAPPVRPLPFIPGSEAAG 67

Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
           V+  VGS V     GDRVA                                 G  A  VV
Sbjct: 68  VVVAVGSGVTGFKVGDRVA-------------------------ALGGVGRDGGYAEYVV 102

Query: 144 HPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGA-GPIGLVTMLG 200
            PAD    LPD +S EE A      L+  L    RA + P   VL+ GA G +G   +  
Sbjct: 103 VPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQL 162

Query: 201 ARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260
           A+A GA  + +V   + +L + KELGAD+++      +D  E+V ++    G G+DV  D
Sbjct: 163 AKALGATVVAVVSSSE-KLELLKELGADHVINYRE--EDFVEQVRELTG--GKGVDVVLD 217

Query: 261 CAGFNKTMSTALSATRAGGKVCLVGM--GHLEMTVPLTP 297
             G   T + +L+A   GG++  +G   G   + + L P
Sbjct: 218 TVG-GDTFAASLAALAPGGRLVSIGALSGGPPVPLNLLP 255

Length = 326

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score =  125 bits (316), Expect = 3e-33
 Identities = 82/297 (27%), Positives = 138/297 (46%), Gaps = 34/297 (11%)

Query: 19  MAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG 78
             AW  G   L I+  E+      +V ++M A  +C +D+  ++  +   F    P+++G
Sbjct: 6   AVAWEAG-KPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKATLF----PVILG 60

Query: 79  HECAGVIEKVGSEVKTLVPGDRVALEPGIS-CWRCDHCKGGRYNLCPEMKFFATP----- 132
           HE AG++E VG  V  L PGD+V +   I  C  C +C+ G+ NLC + +   +      
Sbjct: 61  HEGAGIVESVGEGVTNLKPGDKV-IPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDG 119

Query: 133 ---------PVH-----GSLANQVVHPADLCFKLPDNVSLEEGA-MCEPLSVGLHAC-RR 176
                     ++      + +   V   +   K+     LE    +    S G  A    
Sbjct: 120 TSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNT 179

Query: 177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTN 236
           A + P + V + G G +GL  ++GA+  GA RI+ VD+++ +   AKE GA + +    N
Sbjct: 180 AKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFI----N 235

Query: 237 LQDIAEEV-EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHLEM 291
            +D  + V E I++  G G+D SF+C G    M+ AL +T+ G G   +VG+     
Sbjct: 236 PKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAE 292

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score =  117 bits (295), Expect = 5e-31
 Identities = 64/226 (28%), Positives = 91/226 (40%), Gaps = 42/226 (18%)

Query: 60  YLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGR 119
            L+ L      +  P+  G+   G + +VGS V    PGDRV                  
Sbjct: 7   ALEGLSTGTEKLPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVF----------------- 49

Query: 120 YNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANI 179
                           G  A +VV PA+L   LPD +  E  A+    +  L+  R A  
Sbjct: 50  --------------CFGPHAERVVVPANLLVPLPDGLPPERAALTALAATALNGVRDAEP 95

Query: 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQD 239
                V ++G G +GL+    A+A GA  +V VD D  R  +A+ LG  + V       D
Sbjct: 96  RLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVA-----AD 150

Query: 240 IAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG 285
            A+E+       G G DV  + +G    + TAL   R  G+V LVG
Sbjct: 151 TADEI------GGRGADVVIEASGSPSALETALRLLRDRGRVVLVG 190

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score =  117 bits (295), Expect = 1e-30
 Identities = 72/260 (27%), Positives = 120/260 (46%), Gaps = 20/260 (7%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
            +I+    P  G  +V++++   G+C  D   L  L+     +K P+++GHE  G +E+V
Sbjct: 13  YRIEEVPDPKPGKDEVVIKVNYAGLCYRD---LLQLQGFYPRMKYPVILGHEVVGTVEEV 69

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL 148
           G  VK   PGDRVA         C++C+ G    C     +    + G  A         
Sbjct: 70  GENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGE-ELDGFFAEYAKVKVTS 128

Query: 149 CFKLPDNVSLEEGAMCEP--LSVGLHACRRANIGPETNVLIMGA-GPIGLVTMLGARAFG 205
             K+P NVS +EGA+  P    +     RRA +     VL+ GA G +G+  +  A+A G
Sbjct: 129 LVKVPPNVS-DEGAVIVPCVTGMVYRGLRRAGVKKGETVLVTGAGGGVGIHAIQVAKALG 187

Query: 206 APRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFN 265
           A +++ V   + +  +  +  AD ++  S      +EEV+KI      G D+  +  G  
Sbjct: 188 A-KVIAVTSSESKAKIVSKY-ADYVIVGSK----FSEEVKKIG-----GADIVIETVG-T 235

Query: 266 KTMSTALSATRAGGKVCLVG 285
            T+  +L +   GGK+  +G
Sbjct: 236 PTLEESLRSLNMGGKIIQIG 255

Length = 334

>gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  115 bits (289), Expect = 1e-29
 Identities = 82/279 (29%), Positives = 116/279 (41%), Gaps = 23/279 (8%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
           A  L G   L+++    P   P + LVR+   GIC +D+   K           P V GH
Sbjct: 3   ALVLDGGLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYY------PFPGVPGH 56

Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLA 139
           E  G++E+       LV G RV  E  I+C RC++C+ G Y  CP           G+ A
Sbjct: 57  EFVGIVEEGPEA--ELV-GKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFA 113

Query: 140 NQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTML 199
             +  P +    +PD V  E+    EPL+  L    +  I P   V ++G G +GL+   
Sbjct: 114 EYLTLPLENLHVVPDLVPDEQAVFAEPLAAALEILEQVPITPGDKVAVLGDGKLGLLIAQ 173

Query: 200 GARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259
                G P +V+V     +L++A+ LG      V T L D AE         G G DV  
Sbjct: 174 VLALTG-PDVVLVGRHSEKLALARRLG------VETVLPDEAESE-------GGGFDVVV 219

Query: 260 DCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPA 298
           +  G    +  AL   R  G V L        +  LT A
Sbjct: 220 EATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKA 258

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  111 bits (279), Expect = 3e-28
 Identities = 66/221 (29%), Positives = 104/221 (47%), Gaps = 19/221 (8%)

Query: 19  MAAWLL------GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVV- 71
           M A +L        N L++    +P  GP +VL++++A G+C +D+H ++     D    
Sbjct: 1   MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVE----GDLPPP 56

Query: 72  KEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFA 130
           K P++ GHE  G +E VG  V     GDRV +   G +C  C +C+ GR NLC   +F  
Sbjct: 57  KLPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTG 116

Query: 131 TPPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIM 188
              V G  A  +V      + +P++   EE A  +C  + +G  A + A + P   + + 
Sbjct: 117 Y-TVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGI-IGYRALKLAGLKPGQRLGLY 174

Query: 189 GAGPIG-LVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD 228
           G G    L   + AR  GA  +           +A+ELGAD
Sbjct: 175 GFGASAHLALQI-ARYQGA-EVFAFTRSGEHQELARELGAD 213

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score =  111 bits (278), Expect = 5e-28
 Identities = 90/285 (31%), Positives = 130/285 (45%), Gaps = 44/285 (15%)

Query: 36  LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95
           +P  GP +V+V ++A G+C +D+HY +     +F    P ++GHE AGV+E VG  V  +
Sbjct: 21  VPDPGPGEVIVDIQACGVCHTDLHYREGGINDEF----PFLLGHEAAGVVEAVGEGVTDV 76

Query: 96  VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH-------------GSLANQV 142
            PGD V L     C +C  CK GR   C +    AT  +              G+ A + 
Sbjct: 77  APGDYVVLNWRAVCGQCRACKRGRPWYCFD-THNATQKMTLTDGTELSPALGIGAFAEKT 135

Query: 143 VHPADLCFKL-PDNVSLEEGAMCEPLSVGLHACR-RANIGPETN---------VLIMGAG 191
           +  A  C K+ P           +P + GL  C   A +G   N         V ++G G
Sbjct: 136 LVHAGQCTKVDPA---------ADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCG 186

Query: 192 PIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251
            +G   + GA   GA +I+ VD+DD +L  A+E GA + V  S       + VE I+   
Sbjct: 187 GVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGT-----DPVEAIRALT 241

Query: 252 -GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPL 295
            G G DV  D  G  +T   A  A    G V LVG+   +MT+ L
Sbjct: 242 GGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLEL 286

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

 Score =  108 bits (273), Expect = 3e-27
 Identities = 78/255 (30%), Positives = 132/255 (51%), Gaps = 14/255 (5%)

Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
            L  L   + LV+M+  G+C +D+H    +   DF  K   ++GHE  G++++VG  V +
Sbjct: 19  TLRPLKHGEALVKMEYCGVCHTDLH----VANGDFGDKTGRILGHEGIGIVKEVGPGVTS 74

Query: 95  LVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLP 153
           L  GDRV++      C  C++C  GR  LC  +K  A   V G +A Q +  AD   K+P
Sbjct: 75  LKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVK-NAGYTVDGGMAEQCIVTADYAVKVP 133

Query: 154 DNVSLEEGAMCEPLSVGLH-ACRRANIGPETNVLIMGAGPIG-LVTMLGARAFGAPRIVI 211
           + +   + +      V  + A + + I P   + I GAG +G L        F A +++ 
Sbjct: 134 EGLDPAQASSITCAGVTTYKAIKVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIA 192

Query: 212 VDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTA 271
           VD++D +L++AKE+GAD  +  S  ++D+A+ +++        +  +   A FN+    A
Sbjct: 193 VDINDDKLALAKEVGADLTIN-SKRVEDVAKIIQEKTGGAHAAVVTAVAKAAFNQ----A 247

Query: 272 LSATRAGGKVCLVGM 286
           + A RAGG+V  VG+
Sbjct: 248 VDAVRAGGRVVAVGL 262

Length = 338

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score =  108 bits (272), Expect = 3e-27
 Identities = 81/267 (30%), Positives = 115/267 (43%), Gaps = 45/267 (16%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
           G   L+ +   +P  GP +VLVR  A+G+   D ++   L         P V+G E AGV
Sbjct: 10  GPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPLPL----PFVLGVEGAGV 65

Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           +E VG  V     GDRVA                          +A PP  G+ A   V 
Sbjct: 66  VEAVGPGVTGFKVGDRVA--------------------------YAGPP--GAYAEYRVV 97

Query: 145 PADLCFKLPDNVSLEEGAMCEPLSVGLHA---CRRA-NIGPETNVLIMG-AGPIGLVTML 199
           PA    KLPD +S E  A    L  GL A    R    + P   VL+   AG +GL+   
Sbjct: 98  PASRLVKLPDGISDETAAAL--LLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQ 155

Query: 200 GARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259
            A+A GA  I  V  ++ +  +A+  GAD+++    + +D  E V +I    G G+DV +
Sbjct: 156 WAKALGATVIGTVSSEE-KAELARAAGADHVI-NYRD-EDFVERVREITG--GRGVDVVY 210

Query: 260 DCAGFNKTMSTALSATRAGGKVCLVGM 286
           D  G   T   +L + R  G +   G 
Sbjct: 211 DGVG-KDTFEGSLDSLRPRGTLVSFGN 236

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score =  107 bits (269), Expect = 1e-26
 Identities = 82/295 (27%), Positives = 131/295 (44%), Gaps = 39/295 (13%)

Query: 31  IQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE-PMVIGHECAGVIEKVG 89
           ++  EL      +VLV++ A G+C SD H    L   D  +   P++ GHE AGV+ KVG
Sbjct: 16  VEEIELDDPKAGEVLVKLVASGLCHSDEH----LVTGDLPMPRYPILGGHEGAGVVTKVG 71

Query: 90  SEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE--------MKFFATPPVH------ 135
             V  + PGD V L    +C RC  C  G  NLC               T   H      
Sbjct: 72  PGVTGVKPGDHVVLSFIPACGRCRWCSTGLQNLCDLGAALLTGSQISDGTYRFHADGQDV 131

Query: 136 ------GSLANQVVHPADLCFKLPDNVSLEEGAM---CEPLSVGLHACRRANIGPETNVL 186
                 G+ +   V P     K+ D++ L++  +     P   G  A   A++ P   V+
Sbjct: 132 GQMCLLGTFSEYTVVPEASVVKIDDDIPLDKACLVGCGVPTGWG-SAVNIADVRPGDTVV 190

Query: 187 IMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEK 246
           +MG G +G+  + GA   GA +++ VD  +++   A + GA +          + E V+ 
Sbjct: 191 VMGIGGVGINAVQGAAVAGARKVIAVDPVEFKREQALKFGATHAF------ASMEEAVQL 244

Query: 247 IQKAM-GTGIDVSFDCAGFNK--TMSTALSATRAGGKVCLVGMGHLE-MTVPLTP 297
           +++   G G D +    G      ++ ALSATR GG+V + G+G +  + V +  
Sbjct: 245 VRELTNGQGADKTIITVGEVDGEHIAEALSATRKGGRVVVTGLGPMADVDVKVNL 299

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score =  106 bits (267), Expect = 2e-26
 Identities = 75/267 (28%), Positives = 119/267 (44%), Gaps = 33/267 (12%)

Query: 42  YDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRV 101
           ++V +++ A GIC SD H +        V   P+++GHE AG++E VG  V T+ PGD+V
Sbjct: 33  HEVRIKIVATGICRSDDHVVSGK----LVTPFPVILGHEAAGIVESVGEGVTTVKPGDKV 88

Query: 102 ALEPGISCWRCDHCKGGRYNLCPEMKFFAT---------------PPVH-----GSLANQ 141
                  C +C  C     NLC +                      P+H      + +  
Sbjct: 89  IPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEY 148

Query: 142 VVHPADLCFKLPDNVSLEEGAM--CEPLSVGL-HACRRANIGPETNVLIMGAGPIGLVTM 198
            V       K+     LE+  +  C   S G   A   A + P +   + G G +GL  +
Sbjct: 149 TVVDEIAVAKIDAAAPLEKVCLIGCG-FSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAI 207

Query: 199 LGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEV-EKIQKAMGTGIDV 257
           +G +A GA RI+ VD++  + + AKELGA   +    N QD  + + E + +    G+D 
Sbjct: 208 MGCKAAGASRIIAVDINKDKFAKAKELGATECI----NPQDYKKPIQEVLTEMTDGGVDF 263

Query: 258 SFDCAGFNKTMSTALSATRAGGKVCLV 284
           SF+  G   TM  AL++   G  V ++
Sbjct: 264 SFEVIGRLDTMKAALASCHEGYGVSVI 290

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  105 bits (265), Expect = 3e-26
 Identities = 77/297 (25%), Positives = 117/297 (39%), Gaps = 50/297 (16%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADFVVKEPMVIGHECAG 83
           L+I+   +P+ G  +VL+R++A+G+  +D       Y+            P  +G+E AG
Sbjct: 15  LRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYI-------EPPPLPARLGYEAAG 67

Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
           V+E VG+ V     GDRV++ P       D  + G Y                  A   +
Sbjct: 68  VVEAVGAGVTGFAVGDRVSVIP-----AADLGQYGTY------------------AEYAL 104

Query: 144 HPADLCFKLPDNVSLEEGAMC-EPLSV---GLHACRRANIGPETNVLIMGA-GPIGLVTM 198
            PA    KLPD +S  E A            L     A + P  +VLI  A   +GL  +
Sbjct: 105 VPAAAVVKLPDGLSFVEAAALWMQYLTAYGALV--ELAGLRPGDSVLITAASSSVGLAAI 162

Query: 199 LGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 258
             A A GA  I      + R      LGA ++  + T+ +D+  EV +I    G G+DV 
Sbjct: 163 QIANAAGATVIATTRTSEKR-DALLALGAAHV--IVTDEEDLVAEVLRI--TGGKGVDVV 217

Query: 259 FDCAGFNKTMSTALSATRAGGKVCLVG-MGHLEMTVPLTPAAARYL-IYSFLFHFFL 313
           FD  G     +    A   GG + + G +       PL  A  + L    +      
Sbjct: 218 FDPVG-GPQFAKLADALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEIT 273

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score =  104 bits (261), Expect = 1e-25
 Identities = 74/292 (25%), Positives = 108/292 (36%), Gaps = 66/292 (22%)

Query: 20  AAWLLGVNTLKIQPFE--LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           AA L G     +   +  +P  GP +VLV++KAV +   D  +        F+   P ++
Sbjct: 3   AAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQD----YGFIPSYPAIL 58

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           G + AG + +VGS V     GDRVA              GG  N           P +G+
Sbjct: 59  GCDFAGTVVEVGSGVTRFKVGDRVAG----------FVHGGNPN----------DPRNGA 98

Query: 138 LANQVVHPADLCFKLPDNVSLEEGA------------MCEPLSVGLHACRRANIGPETNV 185
               VV  ADL  K+PDN+S EE A            + + L + L   + +       V
Sbjct: 99  FQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPV 158

Query: 186 LIMGAG-PIGLVTMLGARAFGAPRIVIVDVDDYRLSVA--------KELGADNIV--KVS 234
           LI G    +G + +  A+  G    VI          A        K LGAD +      
Sbjct: 159 LIWGGSSSVGTLAIQLAKLAGYK--VIT--------TASPKNFDLVKSLGADAVFDYHDP 208

Query: 235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 286
                    VE I+ A G  +  + DC    ++      A    G   LV +
Sbjct: 209 D-------VVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSL 253

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase

 Score =  104 bits (261), Expect = 2e-25
 Identities = 78/288 (27%), Positives = 124/288 (43%), Gaps = 42/288 (14%)

Query: 41  PYDVLVRMKAVGICGSDVHYLK---TLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97
             +V +++    +C +DV++ +         F    P ++GHE AG++E VG  V  L P
Sbjct: 27  AMEVRIKILHTSLCHTDVYFWEAKGQTPL--F----PRILGHEAAGIVESVGEGVTDLKP 80

Query: 98  GDRVALEPGISCWRCDHCKGGRYNLCPEMKF--------------FAT--PPVHGSLANQ 141
           GD V       C  C HCK  + N+C  ++               F+    P++  +   
Sbjct: 81  GDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTS 140

Query: 142 ------VVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHACRR-ANIGPETNVLIMGAGP 192
                 VVH   +  K+     L++  +  C  +S GL A    A +   + V I G G 
Sbjct: 141 TFSEYTVVHVGCVA-KINPEAPLDKVCLLSCG-VSTGLGAAWNVAKVKKGSTVAIFGLGA 198

Query: 193 IGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM- 251
           +GL    GAR  GA RI+ VD++  +   AK+ G    V    N +D  + V+++   M 
Sbjct: 199 VGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFV----NPKDHDKPVQEVIAEMT 254

Query: 252 GTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHLEMTVPLTPA 298
           G G+D SF+C G    M +A      G G   L+G+ H +      P 
Sbjct: 255 GGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPM 302

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score =  103 bits (258), Expect = 2e-25
 Identities = 74/274 (27%), Positives = 108/274 (39%), Gaps = 51/274 (18%)

Query: 19  MAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEP 74
           M A  +    G   L++     P  GP +VLV++ A G+   D+   + L  A F +  P
Sbjct: 1   MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLP 60

Query: 75  MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 134
           ++ GH+ AGV+  VG  V     GD V                           F   P 
Sbjct: 61  LIPGHDVAGVVVAVGPGVTGFKVGDEV---------------------------FGMTPF 93

Query: 135 H--GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHA----CRRANIGPETNVLIM 188
              G+ A  VV PAD     P N+S EE A   PL  GL A         +     VLI 
Sbjct: 94  TRGGAYAEYVVVPADELALKPANLSFEEAAAL-PL-AGLTAWQALFELGGLKAGQTVLIH 151

Query: 189 GA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKI 247
           GA G +G   +  A+A GA   VI           + LGAD ++  +    + A      
Sbjct: 152 GAAGGVGSFAVQLAKARGA--RVIATASAANADFLRSLGADEVIDYTKGDFERAAAPG-- 207

Query: 248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKV 281
                 G+D   D  G  +T++ +L+  + GG++
Sbjct: 208 ------GVDAVLDTVGG-ETLARSLALVKPGGRL 234

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  102 bits (256), Expect = 5e-25
 Identities = 85/288 (29%), Positives = 116/288 (40%), Gaps = 47/288 (16%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
            +++    P  GP  VLVR+ A G+   D    +    A      P ++G + AGV+E V
Sbjct: 15  FELREVPRPQPGPGQVLVRVHASGVNPLDTKIRR--GGAAARPPLPAILGCDVAGVVEAV 72

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL 148
           G  V     GD V    G          GG                 GSLA   V  A L
Sbjct: 73  GEGVTRFRVGDEVYGCAGGL--------GGL---------------QGSLAEYAVVDARL 109

Query: 149 CFKLPDNVSLEEGAMCEPLSVGLHA----CRRANIGPETNVLIM-GAGPIGLVTMLGARA 203
               P N+S+ E A   PL VG+ A      RA +     VLI  GAG +G V +  A+A
Sbjct: 110 LALKPANLSMREAA-ALPL-VGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKA 167

Query: 204 FGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQD-IAEEVEKIQKAMGTGIDVSFDCA 262
            GA   V       + + A+ LGAD I+     + + +AE         G G DV FD  
Sbjct: 168 AGA--RVYATASSEKAAFARSLGADPIIYYRETVVEYVAEHTG------GRGFDVVFDTV 219

Query: 263 GFNKTMSTALSATRA-GGKVCLVGMGHLEMTVPLTPAAARYLIYSFLF 309
           G  +T+  +  A    G  V ++G      T  L P + R   YS +F
Sbjct: 220 G-GETLDASFEAVALYGRVVSILGGA----THDLAPLSFRNATYSGVF 262

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score =  101 bits (254), Expect = 8e-25
 Identities = 75/241 (31%), Positives = 111/241 (46%), Gaps = 29/241 (12%)

Query: 19  MAAWLL---GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPM 75
           M A +    G+  LK++  + P  GP +VL+R+K  G+   D          + V  +PM
Sbjct: 1   MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVD------YNVINAVKVKPM 54

Query: 76  --VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPP 133
             + G E AGV+E+VG  VK +  GDRV +   +    CD C  G   LC          
Sbjct: 55  PHIPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGV-V 113

Query: 134 VHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG----LHACRRANIGPETNVLIMG 189
            +G  A  +V P    FK+PD++S E  A    L V      HA + A +GP   V++ G
Sbjct: 114 SNGGYAEYIVVPEKNLFKIPDSISDELAA---SLPVAALTAYHALKTAGLGPGETVVVFG 170

Query: 190 A-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQ 248
           A G  G+  +  A+  GA  I +      R    KE GAD +V       ++ E+V++I 
Sbjct: 171 ASGNTGIFAVQLAKMMGAEVIAVS-----RKDWLKEFGADEVVDYD----EVEEKVKEIT 221

Query: 249 K 249
           K
Sbjct: 222 K 222

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

 Score =  100 bits (250), Expect = 5e-24
 Identities = 85/294 (28%), Positives = 132/294 (44%), Gaps = 36/294 (12%)

Query: 19  MAAWLLGVNTLKIQP--FELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMV 76
             AW  G   LKI+    E+P  G  +VLVR+ A G+C +D     TL  AD     P++
Sbjct: 5   AVAWAAG-QPLKIEEVDVEMPQKG--EVLVRIVATGVCHTDAF---TLSGADPEGVFPVI 58

Query: 77  IGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK--------- 127
           +GHE AG++E VG  V ++  GD V       C  C  C  G+ NLC  ++         
Sbjct: 59  LGHEGAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMP 118

Query: 128 ------FFATPPVH-----GSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHAC 174
                      P++      + +   V P     K+     LEE  +  C  ++ G+ A 
Sbjct: 119 DGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCG-VTTGIGAV 177

Query: 175 -RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV 233
              A +     V + G G IGL  + GAR   A RI+ +D++  +  +AK+LGA + V  
Sbjct: 178 LNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNP 237

Query: 234 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTAL-SATRAGGKVCLVGM 286
           +   + I E + +I      G+D SF+C G    M  AL    +  G+  ++G+
Sbjct: 238 NDYDKPIQEVIVEITDG---GVDYSFECIGNVNVMRAALECCHKGWGESIIIGV 288

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 99.5 bits (249), Expect = 5e-24
 Identities = 89/295 (30%), Positives = 133/295 (45%), Gaps = 37/295 (12%)

Query: 19  MAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADF 69
           M AW L    G++ LK+    +P  GP +VLVR+ AV +   D+      Y         
Sbjct: 1   MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYP-------P 53

Query: 70  VVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 129
            VK+P++   + AG +  VG  V     GDRV     +  +  +   G       E +  
Sbjct: 54  PVKDPLIPLSDGAGEVVAVGEGVTRFKVGDRV-----VPTFFPNWLDGP---PTAEDEAS 105

Query: 130 AT-PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHA----CRRANIGPETN 184
           A   P+ G LA  VV P +   + PD++S EE A   P + GL A         + P   
Sbjct: 106 ALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAA-TLPCA-GLTAWNALFGLGPLKPGDT 163

Query: 185 VLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEV 244
           VL+ G G + L  +  A+A GA R++     D +L  AK LGAD+++   T   D  EEV
Sbjct: 164 VLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINYRTTP-DWGEEV 221

Query: 245 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG-MGHLEMTVPLTPA 298
            K+    G G+D   +  G   T++ ++ A   GG + L+G +   E  V L P 
Sbjct: 222 LKLTG--GRGVDHVVEVGG-PGTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPL 273

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases

 Score = 98.8 bits (247), Expect = 1e-23
 Identities = 74/267 (27%), Positives = 124/267 (46%), Gaps = 33/267 (12%)

Query: 44  VLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVAL 103
           V +++ A G+C +D +   TL  AD     P+++GHE AG++E VG  V ++ PGD V  
Sbjct: 30  VRIKILATGVCHTDAY---TLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPGDHVIP 86

Query: 104 EPGISCWRCDHCKGGRYNLCPEMKFF----------------ATPPVH----GSLAN-QV 142
                C  C  CK G+ NLC +++                    P  H     + +   V
Sbjct: 87  LYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTV 146

Query: 143 VHPADLCFKLPDNVSLEEGAM--CEPLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTML 199
           V    +  K+     L++  +  C  ++ G  A    A + P + V + G G +GL  + 
Sbjct: 147 VAEISVA-KINPEAPLDKVCLLGCG-VTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQ 204

Query: 200 GARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259
           GA+A GA RI+ +D++  +  +AK+ GA + V    + + I    + + +    G+D +F
Sbjct: 205 GAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKDHDKPI---QQVLVEMTDGGVDYTF 261

Query: 260 DCAGFNKTMSTALSATRAG-GKVCLVG 285
           +C G  K M  AL A   G G   ++G
Sbjct: 262 ECIGNVKVMRAALEACHKGWGTSVIIG 288

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score = 94.2 bits (235), Expect = 5e-22
 Identities = 78/275 (28%), Positives = 117/275 (42%), Gaps = 48/275 (17%)

Query: 37  PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE--PMVIGHECAGVIEKVGSEVKT 94
           P+ GP +VLVR+ A G+   D +    +R   +      P V G + AGV+E VG  V  
Sbjct: 23  PTPGPGEVLVRVHASGVNPVDTY----IRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDG 78

Query: 95  LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 154
           L  GDRV        W  +   G R                G+ A  VV PAD    LPD
Sbjct: 79  LKVGDRV--------WLTNLGWGRR---------------QGTAAEYVVVPADQLVPLPD 115

Query: 155 NVSLEEGAMCEPLSVGLHAC-------RRANIGPETNVLIMG-AGPIGLVTMLGARAFGA 206
            VS E+GA     ++G+ A         RA       VL+ G +G +G   +  AR  GA
Sbjct: 116 GVSFEQGA-----ALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA 170

Query: 207 PRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNK 266
            R++          + ++ GAD +       +D+A+ +       G G+DV  +    N 
Sbjct: 171 -RVIATASSAEGAELVRQAGADAVFNYRA--EDLADRILAATA--GQGVDVIIEVL-ANV 224

Query: 267 TMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAAR 301
            ++  L     GG++ + G G L  T+P+ P  A+
Sbjct: 225 NLAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAK 259

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase

 Score = 94.2 bits (235), Expect = 6e-22
 Identities = 73/265 (27%), Positives = 108/265 (40%), Gaps = 32/265 (12%)

Query: 37  PSLGPYDVLVRMKAVGICGSDVHYLKTLRC-----ADFVVKEPMVIGHECAGVIEKVGSE 91
           P   P +VLVR   VG+CG+D   +           DF     +V+GHE  GV+E+VG  
Sbjct: 21  PEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDF-----LVLGHEALGVVEEVGDG 75

Query: 92  VKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQVVHPADLC 149
              L PGD V         +C +C+ GR + C   ++       +HG +    V   +  
Sbjct: 76  -SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYL 134

Query: 150 FKLPDNVSLEEGAMCEPLSV-------GLHACRRANIGPETNVLIMGAGPIGLVTMLGAR 202
            K+P +++ + G + EPLSV            +R         L++GAGPIGL+  L  R
Sbjct: 135 VKVPPSLA-DVGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLR 193

Query: 203 AFGAPRIVI--VDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260
             G    V+   D  D +  + +ELGA  +     N         K+        D+  +
Sbjct: 194 LRGFEVYVLNRRDPPDPKADIVEELGATYV-----NSSKTPVAEVKLVGEF----DLIIE 244

Query: 261 CAGFNKTMSTALSATRAGGKVCLVG 285
             G       AL A    G V L G
Sbjct: 245 ATGVPPLAFEALPALAPNGVVILFG 269

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 93.1 bits (232), Expect = 1e-21
 Identities = 70/257 (27%), Positives = 117/257 (45%), Gaps = 20/257 (7%)

Query: 34  FELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK 93
            ++P  GP +VL++++A G+C SD         A   +  P V GHE  G I+ VG  V 
Sbjct: 18  RDVPLPGPGEVLIKVEACGVCHSDAF---VKEGAMPGLSYPRVPGHEVVGRIDAVGEGVS 74

Query: 94  TLVPGDRVALE-PGISCWRCDHCKGGRYNLCPEMKFFATPPVH--GSLANQVVHPADLCF 150
               GDRV +   G  C  CD C+ G +  C   K      V   G  A  ++ PA+   
Sbjct: 75  RWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKV---TGVTRDGGYAEYMLAPAEALA 131

Query: 151 KLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPR 208
           ++PD++   E A  +C  ++   +A R +   P   V + G G +G + +  A   G  R
Sbjct: 132 RIPDDLDAAEAAPLLCAGVTT-FNALRNSGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-R 189

Query: 209 IVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTM 268
            V +     +  +A++LGA     + T+ +D+AE +    + +G G  +    A   K +
Sbjct: 190 TVAISRGSDKADLARKLGAH--HYIDTSKEDVAEAL----QELG-GAKLILATAPNAKAI 242

Query: 269 STALSATRAGGKVCLVG 285
           S  +      GK+ ++G
Sbjct: 243 SALVGGLAPRGKLLILG 259

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 88.1 bits (219), Expect = 1e-21
 Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 5/111 (4%)

Query: 192 PIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251
            +GL  +  A+A GA R++ VD  + +L +AKELGAD+++      +D  E V ++    
Sbjct: 1   GVGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHVINYRD--EDFVERVRELTG-- 56

Query: 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM-GHLEMTVPLTPAAAR 301
           G G+DV  DC G   T+  AL   R GG+V +VG+ G   +  PL     +
Sbjct: 57  GRGVDVVIDCVGAPATLEQALELLRPGGRVVVVGLPGGAPVPFPLRDLLLK 107

Length = 131

>gnl|CDD|178341 PLN02740, PLN02740, Alcohol dehydrogenase-like

 Score = 93.7 bits (233), Expect = 1e-21
 Identities = 81/288 (28%), Positives = 126/288 (43%), Gaps = 39/288 (13%)

Query: 40  GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGD 99
              +V +++    IC +D+   K    A      P ++GHE AG++E VG  V+ L  GD
Sbjct: 34  QKMEVRIKILYTSICHTDLSAWKGENEAQ--RAYPRILGHEAAGIVESVGEGVEDLKAGD 91

Query: 100 RVALEPGISCWRCDHCKGGRYNLCPEM---------------KFFAT----PPVH----G 136
            V       C  C +CK  + NLC                  +F       P  H     
Sbjct: 92  HVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTS 151

Query: 137 SLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLH-----ACRRANIGPETNVLIMGAG 191
           +     V  +    K+  N  L++  M   LS G+      A   AN+   ++V I G G
Sbjct: 152 TFTEYTVLDSACVVKIDPNAPLKK--MSL-LSCGVSTGVGAAWNTANVQAGSSVAIFGLG 208

Query: 192 PIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEV-EKIQKA 250
            +GL    GARA GA +I+ VD++  +    KE+G  + +    N +D  + V E+I++ 
Sbjct: 209 AVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDFI----NPKDSDKPVHERIREM 264

Query: 251 MGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHLEMTVPLTP 297
            G G+D SF+CAG  + +  A  +T  G G   L+G+      +PL P
Sbjct: 265 TGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHP 312

Length = 381

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score = 90.2 bits (225), Expect = 1e-20
 Identities = 75/280 (26%), Positives = 113/280 (40%), Gaps = 69/280 (24%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADFVVKEPM---- 75
           G   L++     P+ GP +VL+R+ A G+  +D+      Y             P     
Sbjct: 11  GPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLY-------------PPPPGA 57

Query: 76  --VIGHECAGVIEKVGSEVKTLVPGDRV-ALEPGISCWRCDHCKGGRYNLCPEMKFFATP 132
             ++G E AGV+  VG  V     GDRV AL  G          GG Y            
Sbjct: 58  SDILGLEVAGVVVAVGPGVTGWKVGDRVCALLAG----------GG-Y------------ 94

Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGA-MCEP-LSVGLHACRRANIGPETNVLIM-G 189
                 A  VV PA     +P+ +SL E A + E   +   +  +   +     VLI  G
Sbjct: 95  ------AEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGG 148

Query: 190 AGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQK 249
           A  +G   +  A+A GA  I     ++ +L   + LGAD  V ++   +D AEEV++   
Sbjct: 149 ASGVGTAAIQLAKALGARVIATAGSEE-KLEACRALGAD--VAINYRTEDFAEEVKEATG 205

Query: 250 AMGTGIDVSFDCAG---FNKTMSTALSATRAGGKVCLVGM 286
             G G+DV  D  G     +     L A    G++ L+G+
Sbjct: 206 --GRGVDVILDMVGGDYLARN----LRALAPDGRLVLIGL 239

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|234025 TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenase, glutathione-independent

 Score = 91.1 bits (226), Expect = 1e-20
 Identities = 82/307 (26%), Positives = 138/307 (44%), Gaps = 47/307 (15%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYD-------VLVRMKAVGICGSDVHYLKTLRCADFV 70
           N     LG   +++Q  + P L   D       V++++    ICGSD H ++    A   
Sbjct: 3   NRGVVYLGPGKVEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTTA--- 59

Query: 71  VKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLC----PEM 126
               +V+GHE  G + + G +V+ +  GD V++   I+C RC +CK G   +C    P  
Sbjct: 60  -PTGLVLGHEITGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPAR 118

Query: 127 KFFATPPVH-----GSLANQVVHP-ADL-CFKLPD-NVSLEE----GAMCEPLSVGLHAC 174
              A   V      G  +  V+ P AD    K PD + +LE+      + +    G H  
Sbjct: 119 AGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA 178

Query: 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS 234
             A +GP + V I GAGP+GL     A+  GA  +++ D++  RL+ A+  G + +    
Sbjct: 179 VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCETV---- 234

Query: 235 TNLQDIAEEVEKIQKAMGT-GIDVSFDCAGFNK--------------TMSTALSATRAGG 279
            +L   A   E+I++ +G   +D + DC GF                 +++ +  TR GG
Sbjct: 235 -DLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGG 293

Query: 280 KVCLVGM 286
            + + G+
Sbjct: 294 AIGIPGL 300

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent [Central intermediary metabolism, One-carbon metabolism]. Length = 393

>gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

 Score = 89.2 bits (221), Expect = 3e-20
 Identities = 73/277 (26%), Positives = 130/277 (46%), Gaps = 23/277 (8%)

Query: 34  FELPSLGPYDVLVRMKAVGICGSDV-HYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV 92
            E+P LG  DV+V++   G+C +D+ +Y   +R        P+ +GHE +G + + G+  
Sbjct: 16  VEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRT---NHALPLALGHEISGRVIQAGAGA 72

Query: 93  KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD-LCFK 151
            + + G  V +   I C  C+ CK GR  +C   K      + G  A+ +V PA  LC  
Sbjct: 73  ASWI-GKAVIVPAVIPCGECELCKTGRGTICRAQKMPGN-DMQGGFASHIVVPAKGLC-- 128

Query: 152 LPDNVSLEEGAM--------CEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARA 203
           + D   L    +         + ++    A  +A +     V+++GAG +G   +  A+A
Sbjct: 129 VVDEARLAAAGLPLEHVSVVADAVTTPYQAAVQAGLKKGDLVIVIGAGGVGGYMVQTAKA 188

Query: 204 FGAPRIVIVDVDDYRLSVAKELGADNIVKV-STNLQDIAEEVEKIQKAMG---TGIDVSF 259
            GA  +V +D+D  +L + K  GAD  +     + +++ + ++   KA G   TG  + F
Sbjct: 189 MGAA-VVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKARGLRSTGWKI-F 246

Query: 260 DCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLT 296
           +C+G      +ALS    GG + +VG    +    L+
Sbjct: 247 ECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLS 283

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349

>gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase

 Score = 89.2 bits (221), Expect = 4e-20
 Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 27/270 (10%)

Query: 40  GPYDVLVRMKAVGICGSDVHYLKTLRCADF-VVKEPMVIGHECAGVIEKVGSEVKTLVPG 98
           G  DV V++   G+C SD+H +K     ++   + P+V GHE  G++ K+G  VK    G
Sbjct: 36  GDEDVTVKILYCGVCHSDLHTIKN----EWGFTRYPIVPGHEIVGIVTKLGKNVKKFKEG 91

Query: 99  DRVALEPGI---SCWRCDHCKGGRYNLCPEMKFFATPPVH------GSLANQVVHPADLC 149
           DRV +  G+   SC  C+ C     N CP+M F      H      G  ++ +V      
Sbjct: 92  DRVGV--GVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFV 149

Query: 150 FKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAP 207
            + PDN+ L+ GA  +C  ++V           P  ++ + G G +G V +   +AFG  
Sbjct: 150 LRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLK 209

Query: 208 RIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKT 267
             VI    +        LGAD+ + VST+        EK++ A+GT +D   D       
Sbjct: 210 VTVISSSSNKEDEAINRLGADSFL-VSTD-------PEKMKAAIGT-MDYIIDTVSAVHA 260

Query: 268 MSTALSATRAGGKVCLVGMGHLEMTVPLTP 297
           +   L   +  GK+  +G+    + +P+ P
Sbjct: 261 LGPLLGLLKVNGKLITLGLPEKPLELPIFP 290

Length = 360

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score = 87.2 bits (217), Expect = 2e-19
 Identities = 74/254 (29%), Positives = 111/254 (43%), Gaps = 57/254 (22%)

Query: 44  VLVRMKAVGICGSDVHYLKTLRCAD---FVVKEPMVIGHECAGVIEKVGSEVKTLVPGDR 100
           V +R++A G+   D+     L            P V G E AGV+E VG  V     GDR
Sbjct: 30  VRIRVEAAGVNFPDL-----LMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGFKVGDR 84

Query: 101 VALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEE 160
           V                            A     G  A +VV PA   F LPD +S EE
Sbjct: 85  V---------------------------VALTG-QGGFAEEVVVPAAAVFPLPDGLSFEE 116

Query: 161 GAMCEPLS-----VGLHACRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV 214
            A   P++       L   RRA + P   VL++GA G +GL  +  A+A GA R++    
Sbjct: 117 AA-ALPVTYGTAYHALV--RRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAAS 172

Query: 215 DDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG---FNKTMSTA 271
            + +L++A+ LGAD+++       D+ E V+ +    G G+DV +D  G   F      +
Sbjct: 173 SEEKLALARALGADHVIDYRD--PDLRERVKALTG--GRGVDVVYDPVGGDVFEA----S 224

Query: 272 LSATRAGGKVCLVG 285
           L +   GG++ ++G
Sbjct: 225 LRSLAWGGRLLVIG 238

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 85.0 bits (211), Expect = 7e-19
 Identities = 71/282 (25%), Positives = 105/282 (37%), Gaps = 53/282 (18%)

Query: 19  MAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPM 75
           +     G   V  L      +P+  P +VLV++ A  +   D    +           P 
Sbjct: 1   VVYTRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPP 60

Query: 76  VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 135
           + G + AG +  VGS V     GD V                  +   P           
Sbjct: 61  IPGMDFAGEVVAVGSGVTRFKVGDEV------------------FGRLPPKGG------- 95

Query: 136 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHAC----RRANIGPETNVLIMGA- 190
           G+LA  VV P     K P+ VS EE A   P++ GL A         + P   VLI GA 
Sbjct: 96  GALAEYVVAPESGLAKKPEGVSFEEAA-ALPVA-GLTALQALRDAGKVKPGQRVLINGAS 153

Query: 191 GPIGLVTMLGARAFGAPRIVIVD----VDDYRLSVAKELGADNIVKVSTNLQDIAEEVEK 246
           G +G   +  A+A GA  +  V      +     + + LGAD ++  +T  +D       
Sbjct: 154 GGVGTFAVQIAKALGA-HVTGVCSTRNAE-----LVRSLGADEVIDYTT--EDFVALTAG 205

Query: 247 IQKAMGTGIDVSFDCAGFNK-TMSTALSATRAGGKVCLVGMG 287
            +K      DV FD  G +  ++  A  A + GG+   VG G
Sbjct: 206 GEK-----YDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGG 242

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176200 cd08238, sorbose_phosphate_red, L-sorbose-1-phosphate reductase

 Score = 82.1 bits (203), Expect = 2e-17
 Identities = 64/232 (27%), Positives = 100/232 (43%), Gaps = 40/232 (17%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKT----LRCADFVVKEPM 75
           A  + G   L+++ FELP +   ++LVR+ +  +C S            +  + + KEP+
Sbjct: 5   AWRMYGKGDLRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPV 64

Query: 76  VIGHECAGVIEKVGSEVK-TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 134
           ++GHE AG I KVG + +    PG R  ++P +       C G  Y              
Sbjct: 65  ILGHEFAGTILKVGKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYP----------- 113

Query: 135 HGSLANQVVHPADL----CFKLPDNVSLEEGAMCEPLS--VG-LHACRRANIG------- 180
            G LA   + P ++    C  + +     E ++ EPLS  +G   A      G       
Sbjct: 114 -GGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCVIGAYTANYHLQPGEYRHRMG 172

Query: 181 --PETNVLIMG-AGPIGLVTMLGARAFGAP----RIVIVDVDDYRLSVAKEL 225
             P  N  I+G AGP+GL  M    A   P     +V+ DV+D RL+ A+ L
Sbjct: 173 IKPGGNTAILGGAGPMGL--MAIDYAIHGPIGPSLLVVTDVNDERLARAQRL 222

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 410

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score = 80.8 bits (200), Expect = 3e-17
 Identities = 69/262 (26%), Positives = 103/262 (39%), Gaps = 49/262 (18%)

Query: 28  TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK 87
            L++    +P  GP +VLVRM A  I  SD+  +            P V G+E  GV+ +
Sbjct: 13  VLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGA--YGSRPPLPAVPGNEGVGVVVE 70

Query: 88  VGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD 147
           VGS V  L+ G RV    G   W+                              VV PAD
Sbjct: 71  VGSGVSGLLVGQRVLPLGGEGTWQ----------------------------EYVVAPAD 102

Query: 148 LCFKLPDNVSLEEGAMC--EPLSVGLHACRRANIGPETNVLIMGAGP------IGLVTML 199
               +PD++S E+ AM    PL+  L       + P   V+   A        I L  +L
Sbjct: 103 DLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLL 162

Query: 200 GARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259
           G +      I +V  D+    + K LGAD ++  S    D+A+ V++     G G  ++ 
Sbjct: 163 GFKT-----INVVRRDEQVEEL-KALGADEVIDSSPE--DLAQRVKEATG--GAGARLAL 212

Query: 260 DCAGFNKTMSTALSATRAGGKV 281
           D  G     +    + R GG +
Sbjct: 213 DAVGGESA-TRLARSLRPGGTL 233

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 80.7 bits (200), Expect = 3e-17
 Identities = 74/258 (28%), Positives = 101/258 (39%), Gaps = 59/258 (22%)

Query: 21  AWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADFVV 71
           A +L    G++ LK++   LP     +V VR++A G+  +D+      Y           
Sbjct: 2   AVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSA-------P 54

Query: 72  KEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT 131
           K P V G ECAG +E VG  VK    GDRV     +   R                    
Sbjct: 55  KPPFVPGFECAGTVEAVGEGVKDFKVGDRV-----MGLTRF------------------- 90

Query: 132 PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHA----CRRANIGPETNVLI 187
               G  A  V  PAD  F LPD +S EE A        L A        N+ P  +VL+
Sbjct: 91  ----GGYAEVVNVPADQVFPLPDGMSFEEAAAF--PVNYLTAYYALFELGNLRPGQSVLV 144

Query: 188 -MGAGPIGLVTMLGARAFGAPRIVIV-DVDDYRLSVAKELGADNIVKVSTNLQDIAEEVE 245
              AG +GL    G      P + +V      +    KE G  +++   T  QD  EEV+
Sbjct: 145 HSAAGGVGL--AAGQLCKTVPNVTVVGTASASKHEALKENGVTHVIDYRT--QDYVEEVK 200

Query: 246 KIQKAMGTGIDVSFDCAG 263
           KI      G+D+  D  G
Sbjct: 201 KIS---PEGVDIVLDALG 215

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like

 Score = 81.1 bits (200), Expect = 3e-17
 Identities = 71/281 (25%), Positives = 122/281 (43%), Gaps = 34/281 (12%)

Query: 21  AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
           AW  G   L ++  E+    P ++ +++ +  +C SD+   ++   A F    P + GHE
Sbjct: 18  AWGAG-EALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQ--ALF----PRIFGHE 70

Query: 81  CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM-------------- 126
            +G++E +G  V     GD V       C  C HC  G+ N+C  +              
Sbjct: 71  ASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKT 130

Query: 127 --KFFATPPVH----GSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRAN 178
                  P  H     S +   V  +    K+     L +  +    ++ GL A    A+
Sbjct: 131 RFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVAD 190

Query: 179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQ 238
           +   ++V+I G G +GL    GA+  GA +I+ VD++  +   AK  G  + +    N  
Sbjct: 191 VSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFI----NPN 246

Query: 239 DIAEEVEKIQKAM-GTGIDVSFDCAGFNKTMSTALSATRAG 278
           D++E ++++ K M G G D SF+C G     +TAL +   G
Sbjct: 247 DLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDG 287

Length = 378

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score = 78.0 bits (193), Expect = 2e-16
 Identities = 45/167 (26%), Positives = 68/167 (40%), Gaps = 37/167 (22%)

Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVA 102
           +V V +KA G+   DV     L     +  +   +G EC+G++ +VGS V  L  GDRV 
Sbjct: 2   EVEVEVKAAGLNFRDV-----LVALGLLPGDETPLGLECSGIVTRVGSGVTGLKVGDRVM 56

Query: 103 LEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA 162
              G++                           G+ A  V   A L  K+PD++S EE A
Sbjct: 57  ---GLA--------------------------PGAFATHVRVDARLVVKIPDSLSFEEAA 87

Query: 163 -MCEPLSVGLHA-CRRANIGPETNVLIM-GAGPIGLVTMLGARAFGA 206
            +        +A    A +    +VLI   AG +G   +  A+  GA
Sbjct: 88  TLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGA 134

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score = 76.9 bits (190), Expect = 5e-16
 Identities = 65/261 (24%), Positives = 96/261 (36%), Gaps = 65/261 (24%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADFVVKEPM------VI 77
           L +    LP     +VL+R+ A G+   D+      Y             P       ++
Sbjct: 15  LVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKY-------------PPPPGASDIL 61

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           G E AG +  VG  V     GDRV          C    GG Y                 
Sbjct: 62  GLEVAGEVVAVGEGVSRWKVGDRV----------CALVAGGGY----------------- 94

Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEP---LSVGLHACRRANIGPETNVLIM-GAGPI 193
            A  V  PA     +P+ +SL E A   P    +V  +  +R  +     VLI  GA  I
Sbjct: 95  -AEYVAVPAGQVLPVPEGLSLVEAAAL-PETFFTVWSNLFQRGGLKAGETVLIHGGASGI 152

Query: 194 GLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT 253
           G   +  A+AFGA        D+ + +  + LGAD  + ++   +D  E V+   +  G 
Sbjct: 153 GTTAIQLAKAFGARVFTTAGSDE-KCAACEALGAD--IAINYREEDFVEVVK--AETGGK 207

Query: 254 GIDVSFDCAG---FNKTMSTA 271
           G+DV  D  G    N+ +   
Sbjct: 208 GVDVILDIVGGSYLNRNIKAL 228

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|132409 TIGR03366, HpnZ_proposed, putative phosphonate catabolism associated alcohol dehydrogenase

 Score = 73.7 bits (181), Expect = 4e-15
 Identities = 58/225 (25%), Positives = 89/225 (39%), Gaps = 22/225 (9%)

Query: 76  VIGHECAGVIEKVGSEV------KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK-- 127
           V+GHE  G +  +            L  G RV     + C RC  C+ G    C  ++  
Sbjct: 1   VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKY 60

Query: 128 ----FFATPPVHGSLANQVVHPADL-CFKLPDNV--SLEEGAMCEPLSVGLHACRRANIG 180
                 +  P+ G  A     PA      +PD++  ++   A C   +V + A   A   
Sbjct: 61  GHEALDSGWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATV-MAALEAAGDL 119

Query: 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI 240
               VL++GAG +GL     A A GA R+V  D    R  +A   GA  + +       +
Sbjct: 120 KGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRELALSFGATALAEPEV----L 175

Query: 241 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG 285
           AE    +Q   G G+DV+ + +G    +   L +   GG   L G
Sbjct: 176 AERQGGLQN--GRGVDVALEFSGATAAVRACLESLDVGGTAVLAG 218

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. Length = 280

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 72.7 bits (179), Expect = 1e-14
 Identities = 77/277 (27%), Positives = 108/277 (38%), Gaps = 47/277 (16%)

Query: 19  MAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEP 74
           M AW+L        L ++  E+P  G  +VLV++ A G+   D   +     A      P
Sbjct: 1   MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAW---SYP 57

Query: 75  MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 134
            V G + AGV+  VG++V     GDRVA           H    R               
Sbjct: 58  HVPGVDGAGVVVAVGAKVTGWKVGDRVAY----------HASLAR--------------- 92

Query: 135 HGSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHAC-RRANIGPETNVLIMGA- 190
            GS A   V  A     LPD++S EE A   C        A  ++  I     +LI G  
Sbjct: 93  GGSFAEYTVVDARAVLPLPDSLSFEEAAALPC-AGLTAYQALFKKLRIEAGRTILITGGA 151

Query: 191 GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA 250
           G +G   +  A+  G    VI           K LGAD    +  N +D+ E +++I   
Sbjct: 152 GGVGSFAVQLAKRAGL--RVITTCSKRNFEYVKSLGAD--HVIDYNDEDVCERIKEITG- 206

Query: 251 MGTGIDVSFDCAGFNKTMSTALSATRA--GGKVCLVG 285
            G G+D   D  G     + AL+ T A  G  VC+ G
Sbjct: 207 -GRGVDAVLDTVG--GETAAALAPTLAFNGHLVCIQG 240

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase

 Score = 72.0 bits (176), Expect = 3e-14
 Identities = 69/269 (25%), Positives = 117/269 (43%), Gaps = 24/269 (8%)

Query: 40  GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGD 99
           G  DV V++   G+C SD+H   T++      + P++ GHE  G+  KVG  V     GD
Sbjct: 30  GENDVTVKILFCGVCHSDLH---TIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGD 86

Query: 100 RVALEPGI-SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQ------VVHPADLCFKL 152
           RV +   I SC  C+ C     N CP++ F           NQ      +V        +
Sbjct: 87  RVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSI 146

Query: 153 PDNVSLEEGA--MCEPLSVGLHACRRANIGPET--NVLIMGAGPIGLVTMLGARAFGAPR 208
           PD +  + GA  +C  ++V     +   +  E+   + + G G +G + +   +AFG   
Sbjct: 147 PDGLPSDSGAPLLCAGITV-YSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLRV 205

Query: 209 IVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTM 268
            VI    +        LGAD+ + V+T+ Q       K+++A+GT +D   D       +
Sbjct: 206 TVISRSSEKEREAIDRLGADSFL-VTTDSQ-------KMKEAVGT-MDFIIDTVSAEHAL 256

Query: 269 STALSATRAGGKVCLVGMGHLEMTVPLTP 297
               S  +  GK+  +G+    + +P+ P
Sbjct: 257 LPLFSLLKVSGKLVALGLPEKPLDLPIFP 285

Length = 375

>gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase

 Score = 70.2 bits (172), Expect = 1e-13
 Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 23/262 (8%)

Query: 34  FELPSLGPYDVLVRMKAVGICGSDVHYLKT-LRCADFVVKEPMVIGHECAGVIEKVGSEV 92
           + L   GP DV++++   GIC +D+H +K  L  +++    PMV GHE  G + +VGS+V
Sbjct: 27  YTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNY----PMVPGHEVVGEVVEVGSDV 82

Query: 93  KTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFAT------PPVHGSLANQVVHP 145
                GD V +   +  C  C  CK      C +  +          P  G  A+ +V  
Sbjct: 83  SKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVD 142

Query: 146 ADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARA 203
                K+P+ ++ E+ A  +C  ++V                 I+G G +G + +  A+A
Sbjct: 143 QKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKA 202

Query: 204 FGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 263
            G    VI   D  R    + LGAD+ +        ++ +  ++Q+A    +D   D   
Sbjct: 203 MGHHVTVISSSDKKREEALEHLGADDYL--------VSSDAAEMQEA-ADSLDYIIDTVP 253

Query: 264 FNKTMSTALSATRAGGKVCLVG 285
               +   LS  +  GK+ L+G
Sbjct: 254 VFHPLEPYLSLLKLDGKLILMG 275

Length = 357

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score = 69.0 bits (170), Expect = 2e-13
 Identities = 48/171 (28%), Positives = 65/171 (38%), Gaps = 52/171 (30%)

Query: 46  VRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEP 105
           + ++A G+   DV  L  L     +     V+G ECAGV+ +VG  V  L  GDRV    
Sbjct: 1   IEVRAAGLNFRDV--LIALG----LYPGEAVLGGECAGVVTRVGPGVTGLAVGDRVM--- 51

Query: 106 GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE 165
           G+                            G+ A +VV  A L   +PD  S EE A   
Sbjct: 52  GL--------------------------APGAFATRVVTDARLVVPIPDGWSFEEAA--- 82

Query: 166 PLSV---------GLHACRRANIGPETNVLI-MGAGPIGLVTMLGARAFGA 206
             +V          L     A + P  +VLI   AG +G   +  AR  GA
Sbjct: 83  --TVPVVFLTAYYALV--DLARLRPGESVLIHAAAGGVGQAAIQLARHLGA 129

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score = 69.2 bits (170), Expect = 2e-13
 Identities = 58/248 (23%), Positives = 87/248 (35%), Gaps = 65/248 (26%)

Query: 41  PYDVLVRMKAVGICGSDV--------HYLKTLRCADFVVKE----PMVIGHECAGVIEKV 88
           P  VL+++ A  +   DV          L   R            P+ +G +C+GV+  +
Sbjct: 29  PNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRDCSGVVVDI 88

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH-GSLANQVVHPAD 147
           GS VK+   GD V                            A PP   G+ A  VV P +
Sbjct: 89  GSGVKSFEIGDEVWG--------------------------AVPPWSQGTHAEYVVVPEN 122

Query: 148 LCFKLPDNVSLEEGAMCEPLSVGLHAC-------RRANIGPET----NVLIMGA-GPIGL 195
              K P N+S EE A     S+                + P+      VLI+G  G +G 
Sbjct: 123 EVSKKPKNLSHEEAA-----SLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGT 177

Query: 196 VTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 255
             +   +A+GA   V        + + K LGAD+++       D   E  + +       
Sbjct: 178 FAIQLLKAWGA--HVTTTCSTDAIPLVKSLGADDVI-------DYNNEDFEEELTERGKF 228

Query: 256 DVSFDCAG 263
           DV  D  G
Sbjct: 229 DVILDTVG 236

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|131869 TIGR02822, adh_fam_2, zinc-binding alcohol dehydrogenase family protein

 Score = 68.4 bits (167), Expect = 5e-13
 Identities = 59/201 (29%), Positives = 90/201 (44%), Gaps = 19/201 (9%)

Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI-GHECAGVIEKVGSEVK 93
            +P  GP ++LVR++A G+C +D+H  +     D  V  P V  GHE  G +   G++  
Sbjct: 21  PVPRPGPGELLVRVRACGVCRTDLHVSE----GDLPVHRPRVTPGHEVVGEVAGRGADAG 76

Query: 94  TLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL 148
               GDRV    GI     +C  C +C+ G  NLCP  ++       G  A     PA  
Sbjct: 77  GFAVGDRV----GIAWLRRTCGVCRYCRRGAENLCPASRYTGW-DTDGGYAEYTTVPAAF 131

Query: 149 CFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA 206
            ++LP      E A  +C  + +G  A  RA++ P   + + G G    +T   A A GA
Sbjct: 132 AYRLPTGYDDVELAPLLCAGI-IGYRALLRASLPPGGRLGLYGFGGSAHLTAQVALAQGA 190

Query: 207 PRIVIVDVDDYRLSVAKELGA 227
             + ++        +A  LGA
Sbjct: 191 -TVHVMTRGAAARRLALALGA 210

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized [Energy metabolism, Fermentation]. Length = 329

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score = 68.0 bits (167), Expect = 6e-13
 Identities = 64/260 (24%), Positives = 106/260 (40%), Gaps = 52/260 (20%)

Query: 11  KEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFV 70
           +E G+ +        V  L +   E+P  GP +VL++++A  I  SD+ +LK        
Sbjct: 7   EEYGKPLE-------VKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQ--YGST 57

Query: 71  VKEPMVIGHECAGVIEKVGSEV--KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF 128
              P+  G E +G +   G     ++L+ G RVA               G Y        
Sbjct: 58  KALPVPPGFEGSGTVVAAGGGPLAQSLI-GKRVA------------FLAGSY-------- 96

Query: 129 FATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC--EPLSV-GLHACRRANIGPETNV 185
                  G+ A   V  A  C  LPD VS E+GA     PL+  G+    R   G +  V
Sbjct: 97  -------GTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGMLETAREE-GAKAVV 148

Query: 186 LIMGAGPIGLVTML--GARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEE 243
               A  +G   ML    +A G   I IV   +  + + K++GA+ +  ++++  D  E+
Sbjct: 149 HTAAASALG--RMLVRLCKADGIKVINIVRRKEQ-VDLLKKIGAEYV--LNSSDPDFLED 203

Query: 244 VEKIQKAMGTGIDVSFDCAG 263
           ++++         + FD  G
Sbjct: 204 LKELIAK--LNATIFFDAVG 221

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score = 67.7 bits (166), Expect = 8e-13
 Identities = 60/249 (24%), Positives = 96/249 (38%), Gaps = 51/249 (20%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADFVVKEPMVIGH 79
           GV+ LKI     P+    DVL+++ A G+  +D       Y      ++       ++G 
Sbjct: 12  GVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSE-------ILGL 64

Query: 80  ECAGVIEKVGSEVKTLVPGDRV-ALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSL 138
           E AG +E VGS+VK    GDRV AL PG                             G  
Sbjct: 65  EVAGYVEDVGSDVKRFKEGDRVMALLPG-----------------------------GGY 95

Query: 139 ANQVVHPADLCFKLPDNVSLEE-GAMCEPLSVGLHACRR-ANIGPETNVLI-MGAGPIGL 195
           A   V        +P   + EE  A+ E         ++  ++    +VLI  GA  +G 
Sbjct: 96  AEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGT 155

Query: 196 VTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG-TG 254
                A  +GA  I+    ++ ++   K+L A  ++       D      K++K  G  G
Sbjct: 156 AAAQLAEKYGAATIITTSSEE-KVDFCKKLAAIILI----RYPDEEGFAPKVKKLTGEKG 210

Query: 255 IDVSFDCAG 263
           +++  DC G
Sbjct: 211 VNLVLDCVG 219

Length = 334

>gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase

 Score = 66.3 bits (162), Expect = 3e-12
 Identities = 53/208 (25%), Positives = 83/208 (39%), Gaps = 15/208 (7%)

Query: 37  PSLGPYDVLVRMKAVGICGSDVHYLKTL------RCADFVVKEPM-VIGHECAGVIEKVG 89
           P LGP +VLV + A G+  ++V                    EP  + G + +G++  VG
Sbjct: 38  PELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSDASGIVWAVG 97

Query: 90  SEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLC 149
             VK    GD V +   +         GG     P  + +     +GS A   +  A   
Sbjct: 98  EGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQL 157

Query: 150 FKLPDNVSLEEGAMCEPLSVG-----LHACRRANIGPETNVLIMGA-GPIGLVTMLGARA 203
              P ++S EE A    L        L       + P  NVLI GA G +G + +  ARA
Sbjct: 158 MPKPKHLSWEEAA-AYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARA 216

Query: 204 FGAPRIVIVDVDDYRLSVAKELGADNIV 231
            GA  + +V   + +    + LGA+ ++
Sbjct: 217 AGANPVAVVS-SEEKAEYCRALGAEGVI 243

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 61.5 bits (150), Expect = 9e-11
 Identities = 68/295 (23%), Positives = 104/295 (35%), Gaps = 65/295 (22%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
           G   LK+   +LP     +V+V+++A G+  +DV   + L         P   G++  G 
Sbjct: 11  GPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYP--DQPPLPFTPGYDLVGR 68

Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           ++ +GS V     GDRVA                           A   V G  A  +  
Sbjct: 69  VDALGSGVTGFEVGDRVA---------------------------ALTRV-GGNAEYINL 100

Query: 145 PADLCFKLPDNVSLEEGAMCEPLSV-----GLHACRRANIGPETNVLIMGA-GPIG---- 194
            A     +P+ V   E A+C  L+       LH  R A +     VLI GA G +G    
Sbjct: 101 DAKYLVPVPEGVDAAE-AVCLVLNYVTAYQMLH--RAAKVLTGQRVLIHGASGGVGQALL 157

Query: 195 -LVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT 253
            L  + GA  +G          +   +  +ELGA       T +    ++        G 
Sbjct: 158 ELALLAGAEVYGT-------ASERNHAALRELGA-------TPIDYRTKDWLPAMLTPG- 202

Query: 254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM-----GHLEMTVPLTPAAARYL 303
           G+DV FD  G  ++   + +A   GG +   G              L    AR  
Sbjct: 203 GVDVVFDGVGG-ESYEESYAALAPGGTLVCYGGNSSLLQGRRSLAALGSLLARLA 256

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase

 Score = 61.4 bits (149), Expect = 1e-10
 Identities = 73/290 (25%), Positives = 109/290 (37%), Gaps = 51/290 (17%)

Query: 36  LPSLGPYDVLVRMKAVGI--------CGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK 87
           +P LGP +VLV + A G+         G  V     LR    +     +IG + +GV+ +
Sbjct: 32  VPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGKLDLPFHIIGSDASGVVWR 91

Query: 88  VGSEVKTLVPGDRVALEPGISCWRCD----HCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
           VG  V     GD V      SC + D      + G   L  E + +      GS A   +
Sbjct: 92  VGPGVTRWKVGDEVV----ASCLQVDLTAPDGRDGDPMLSSEQRIWGYETNFGSFAEFAL 147

Query: 144 HPADLCFKLPDNVSLEEGAMCEPLSVG-----LHACRRANIGPETNVLIMGA-GPIGLVT 197
                    P +++ EE A C  L+       L     A + P  NVLI GA G +G   
Sbjct: 148 VKDYQLMPKPKHLTWEEAA-CPGLTGATAYRQLVGWNPAAVKPGDNVLIWGAAGGLGSYA 206

Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA-------------EEV 244
              ARA G   + +V   + +    + LGA+ ++    +  D               +E 
Sbjct: 207 TQLARAGGGNPVAVVSSPE-KAEYCRSLGAEAVI----DRNDFGHWGRLPDHNTQAPKEW 261

Query: 245 EKIQKAMGTGI---------DVSFDCAGFNKTMSTALSATRAGGKVCLVG 285
            K  K  G  I         D+ F+  G   T  T++   R GG V + G
Sbjct: 262 TKSFKRFGKRIRELTGGEDPDIVFEHPG-RATFPTSVYVCRRGGMVVICG 310

The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398

>gnl|CDD|176199 cd08237, ribitol-5-phosphate_DH, ribitol-5-phosphate dehydrogenase

 Score = 60.8 bits (148), Expect = 1e-10
 Identities = 59/229 (25%), Positives = 97/229 (42%), Gaps = 32/229 (13%)

Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKE-PMVIGHECAGVIEKVGSEVKTLVPGDRV 101
            V+VR   + IC +D  Y +  R  + + K+ PM + HE  GV+  V     T   G +V
Sbjct: 27  WVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVV--VSDPTGTYKVGTKV 84

Query: 102 ALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEG 161
            + P       +  +    N  P  +F ++    G + + V  P D   KLPDNV  E  
Sbjct: 85  VMVPNTPV---EKDEIIPENYLPSSRFRSSG-YDGFMQDYVFLPPDRLVKLPDNVDPEVA 140

Query: 162 AMCEPLSVGLHACRRAN---IGPETNVLIMGAGPIGLVT-MLGARAFGAPRIVIVDVDDY 217
           A  E +SVG+HA  R           + + G G +G +T +L  + +   ++V+      
Sbjct: 141 AFTELVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQE 200

Query: 218 RL---SVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 263
           +L   S A E         +  + DI E++          +D +F+C G
Sbjct: 201 KLDLFSFADE---------TYLIDDIPEDLA---------VDHAFECVG 231

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 341

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 60.7 bits (148), Expect = 2e-10
 Identities = 68/262 (25%), Positives = 106/262 (40%), Gaps = 39/262 (14%)

Query: 28  TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK 87
            LK++   +P   P  VL+R+KA G+  S++    T +     VK P V+G E  G +E+
Sbjct: 14  VLKLREIPIPEPKPGWVLIRVKAFGLNRSEIF---TRQGHSPSVKFPRVLGIEAVGEVEE 70

Query: 88  VGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD 147
                 T  PG RVA   G                   M         GS A   + P +
Sbjct: 71  APGG--TFTPGQRVATAMG------------------GMGR----TFDGSYAEYTLVPNE 106

Query: 148 LCFKLPDNVSLEE-GAMCEPLSVGLHACRRA-NIGPETNVLIMGA-GPIGLVTMLGARAF 204
             + +  ++S  E  A+ E       +  R+  + P   +LI G    +GL  +  A+A 
Sbjct: 107 QVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKAL 166

Query: 205 GAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGF 264
           G   +        R ++ KELGAD +V    +   IAE++         G D   +  G 
Sbjct: 167 G-ATVTATTRSPERAALLKELGADEVV---IDDGAIAEQLRAA----PGGFDKVLELVG- 217

Query: 265 NKTMSTALSATRAGGKVCLVGM 286
             T+  +L   R GG VC+ G+
Sbjct: 218 TATLKDSLRHLRPGGIVCMTGL 239

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members

 Score = 56.4 bits (137), Expect = 5e-09
 Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 3/65 (4%)

Query: 37  PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96
           P  G  D+LVR++AV +   D    K       V  +P ++G + +GV+E VGSEV    
Sbjct: 26  PVPGGRDLLVRVEAVSVNPVDT---KVRAGGAPVPGQPKILGWDASGVVEAVGSEVTLFK 82

Query: 97  PGDRV 101
            GD V
Sbjct: 83  VGDEV 87

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score = 54.7 bits (132), Expect = 1e-08
 Identities = 59/227 (25%), Positives = 89/227 (39%), Gaps = 39/227 (17%)

Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           E+   GP +V ++++A  +   D+  ++ L     +   P   G E +GV+  VG  V  
Sbjct: 1   EVAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPT--MPPYPFTPGFEASGVVRAVGPHVTR 58

Query: 95  LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 154
           L  GD V    G                   M         G  A  V  P D   + P 
Sbjct: 59  LAVGDEVIAGTG-----------------ESM---------GGHATLVTVPEDQVVRKPA 92

Query: 155 NVSLEEGAMCEPLSVGL---HACRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIV 210
           ++S EE   C    V L    A  RA +    ++LI  A G  GL+ +  AR  GA    
Sbjct: 93  SLSFEEA--CALPVVFLTVIDAFARAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYA 150

Query: 211 IVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257
               DD +L   K+LG  +++       D  EE+ ++    G G+DV
Sbjct: 151 TASSDD-KLEYLKQLGVPHVINYVEE--DFEEEIMRLTG--GRGVDV 192

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2

 Score = 54.3 bits (131), Expect = 2e-08
 Identities = 74/244 (30%), Positives = 93/244 (38%), Gaps = 45/244 (18%)

Query: 26  VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE-PMVIGHECAGV 84
            + L+I     P+ G  +VLVR     I   D   L T+R       E P + G E  GV
Sbjct: 13  ADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHD---LWTIRGTYGYKPELPAIGGSEAVGV 69

Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           ++ VG  VK L  G RVA                              PVHG+ A   V 
Sbjct: 70  VDAVGEGVKGLQVGQRVA-------------------------VA---PVHGTWAEYFVA 101

Query: 145 PADLCFKLPDNVSLEEGAM--CEPLSVGLHACRRANIGP-ETNVLIMGAGPIG-LVTMLG 200
           PAD    LPD +S E  A     PLS  L       + P +  +     G +G LV ML 
Sbjct: 102 PADGLVPLPDGISDEVAAQLIAMPLS-ALMLLDFLGVKPGQWLIQNAAGGAVGKLVAML- 159

Query: 201 ARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV-STNLQDIAEEVEKIQKAMGTGIDVSF 259
           A A G   I +V  D        EL A  I  V ST      ++V +   A G  I V+ 
Sbjct: 160 AAARGINVINLVRRDA----GVAELRALGIGPVVSTEQPGWQDKVREA--AGGAPISVAL 213

Query: 260 DCAG 263
           D  G
Sbjct: 214 DSVG 217

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score = 53.2 bits (128), Expect = 5e-08
 Identities = 66/244 (27%), Positives = 97/244 (39%), Gaps = 42/244 (17%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKT-LRCADFVVKE-PMVIGHECA 82
           G   L+   F        +V V  KA+GI     +Y+ T +R   +     P  +G E A
Sbjct: 12  GPEVLQAVEFTPADPAENEVQVENKAIGI-----NYIDTYIRSGLYPPPSLPSGLGTEAA 66

Query: 83  GVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQV 142
           GV+ KVGS VK +  GDRV                  Y         A   VH   A++ 
Sbjct: 67  GVVSKVGSGVKHIKVGDRVV-----------------YAQSA---LGAYSSVHNVPADKA 106

Query: 143 VHPADLCFKLPDNVSLEEGAMC--EPLSVGLHACRRANIGP-ETNVLIMGAGPIGLVTML 199
                    LPD +S E+ A    + L+V     +   I P E  +    AG +GL+   
Sbjct: 107 A-------ILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQ 159

Query: 200 GARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259
            A+A GA  I  V     +   AK+ GA  ++      ++I E V++I    G  + V +
Sbjct: 160 WAKALGAKLIGTVGSAQ-KAQRAKKAGAWQVINYRE--ENIVERVKEITG--GKKVRVVY 214

Query: 260 DCAG 263
           D  G
Sbjct: 215 DSVG 218

Length = 327

>gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase

 Score = 52.8 bits (127), Expect = 6e-08
 Identities = 71/272 (26%), Positives = 98/272 (36%), Gaps = 45/272 (16%)

Query: 37  PSLGPYDVLVRMKAVGICGSDVHYLKT-LRCA----DFVVKEPMVIGHECAGVIEKVGSE 91
           P  GP  V + + A G     VH++ T LR       F  + P V G E AGV++ VG  
Sbjct: 23  PVPGPGQVRIAVAAAG-----VHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPG 77

Query: 92  VKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFK 151
           V     G RV                             T    G  A   V   D    
Sbjct: 78  VDPAWLGRRVVAH--------------------------TGRAGGGYAELAVADVDSLHP 111

Query: 152 LPDNVSLEEG-AMCEPLSVGLHACRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRI 209
           +PD + LE   A+       L     A + P   VL+  A G +G + +  A+A GA  +
Sbjct: 112 VPDGLDLEAAVAVVHDGRTALGLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TV 170

Query: 210 VIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMS 269
           V       + ++ + LGAD  V V     D  ++V   +   G G+ V  D  G      
Sbjct: 171 VGAAGGPAKTALVRALGAD--VAVDYTRPDWPDQVR--EALGGGGVTVVLDGVG-GAIGR 225

Query: 270 TALSATRAGGKVCLVGMGHLEMTVPLTPAAAR 301
            AL+    GG+    G    E T  L    AR
Sbjct: 226 AALALLAPGGRFLTYGWASGEWT-ALDEDDAR 256

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 51.1 bits (123), Expect = 3e-07
 Identities = 40/142 (28%), Positives = 59/142 (41%), Gaps = 36/142 (25%)

Query: 29  LKIQPFELPSLGPYD-VLVRMKAVGICGSDVH-----YLKTLRCADFVVKEPMVIGHECA 82
           L+++ +E+P  GP + VLV+M A  I  +D++     Y           + P V G+E  
Sbjct: 16  LQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIK---PPTTPEPPAVGGNEGV 72

Query: 83  GVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQV 142
           G + KVGS VK+L PGD V                               P  G+     
Sbjct: 73  GEVVKVGSGVKSLKPGDWV---------------------------IPLRPGLGTWRTHA 105

Query: 143 VHPADLCFKLPDNVSLEEGAMC 164
           V PAD   K+P++V  E+ A  
Sbjct: 106 VVPADDLIKVPNDVDPEQAATL 127

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

 Score = 48.4 bits (116), Expect = 2e-06
 Identities = 65/260 (25%), Positives = 102/260 (39%), Gaps = 63/260 (24%)

Query: 29  LKIQPFELP---SLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVK-EPMVIGHECAGV 84
           L I   +LP        +++V++ A  +   D   LK      F  K +   +G + +GV
Sbjct: 13  LTITTIKLPLPNCYKDNEIVVKVHAAALNPVD---LKLYNSYTFHFKVKEKGLGRDYSGV 69

Query: 85  IEKVGSEVKTLVP-GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQ-V 142
           I KVGS V +    GD V    GI      H  GG+                G+L+   +
Sbjct: 70  IVKVGSNVASEWKVGDEVC---GIY----PHPYGGQ----------------GTLSQYLL 106

Query: 143 VHPADLCFKL---PDNVSLEEGAMCEPLSVG-----LHACRRANIGPETNVLIMGAGPIG 194
           V P      +   P+N+SLEE A   PL +G     L    +  +GP++ VL++G     
Sbjct: 107 VDPKKDKKSITRKPENISLEEAA-AWPLVLGTAYQILEDLGQ-KLGPDSKVLVLGGS--- 161

Query: 195 LVTMLG------ARAFGAPRIVIVDVDDYRLSVAKELGADNIV-----KVSTNLQDIAEE 243
             T +G      A+       V+         + K+LGAD+ +          L+ + E 
Sbjct: 162 --TSVGRFAIQLAKNHYNIGTVVGTCSSRSAELNKKLGADHFIDYDAHSGVKLLKPVLEN 219

Query: 244 VEKIQKAMGTGIDVSFDCAG 263
           V+   K      D+  DC G
Sbjct: 220 VKGQGK-----FDLILDCVG 234

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 47.3 bits (113), Expect = 5e-06
 Identities = 59/268 (22%), Positives = 96/268 (35%), Gaps = 37/268 (13%)

Query: 37  PSLGPYDVLVRMKAVGI-----------CGSDVHYLKTLRCADFV------VKEPMVIGH 79
           P+  P +VL+R+ A G+             ++V        A         +  P + G 
Sbjct: 24  PTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRIQGA 83

Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLA 139
           +  G +  VG  V T   G+RV ++P I             +   ++ +  +    G  A
Sbjct: 84  DIVGRVVAVGEGVDTARIGERVLVDPSIR-------DPPEDDPA-DIDYIGS-ERDGGFA 134

Query: 140 NQVVHPADLCFKLPDNVSLEE-GAMCEPLSVGLHACRRANIGPETNVLIMGA-GPIGLVT 197
              V PA+  + +   +S  E        S   +   RA +G    VL+ GA G +G   
Sbjct: 135 EYTVVPAENAYPVNSPLSDVELATFPCSYSTAENMLERAGVGAGETVLVTGASGGVGSAL 194

Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257
           +  A+  GA  IVI      +    + LGAD ++     L      +   +   G  +DV
Sbjct: 195 VQLAKRRGA--IVIAVAGAAKEEAVRALGADTVILRDAPL------LADAKALGGEPVDV 246

Query: 258 SFDCAGFNKTMSTALSATRAGGKVCLVG 285
             D  G        L   R GG+    G
Sbjct: 247 VADVVG-GPLFPDLLRLLRPGGRYVTAG 273

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score = 45.3 bits (108), Expect = 2e-05
 Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 8/76 (10%)

Query: 30  KIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCA---DFVVKEPMVIGHECAGVIE 86
            I    +P  GP +VLV+ + VGI  SD+++      A   D  VK P   G E  G + 
Sbjct: 19  SIVDVPVPLPGPGEVLVKNRFVGINASDINF-----TAGRYDPGVKPPFDCGFEGVGEVV 73

Query: 87  KVGSEVKTLVPGDRVA 102
            VG  V     GD VA
Sbjct: 74  AVGEGVTDFKVGDAVA 89

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|234024 TIGR02817, adh_fam_1, zinc-binding alcohol dehydrogenase family protein

 Score = 40.5 bits (95), Expect = 6e-04
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%)

Query: 37  PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96
           P  G  D+LV +KA+ +   D    K          +P ++G + AGV+  VG EV    
Sbjct: 25  PKPGGRDLLVEVKAISVNPVDT---KVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLFK 81

Query: 97  PGDRV 101
           PGD V
Sbjct: 82  PGDEV 86

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model [Energy metabolism, Fermentation]. Length = 336

>gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases

 Score = 40.6 bits (96), Expect = 6e-04
 Identities = 58/239 (24%), Positives = 82/239 (34%), Gaps = 61/239 (25%)

Query: 74  PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCD----HCKGGRYNLCPEMKFF 129
           P   G + AG +    S+      GD V           D                    
Sbjct: 58  PHTPGIDAAGTVVS--SDDPRFREGDEVL------VTGYDLGMNT--------------- 94

Query: 130 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-------EPLSVGLHACRRANIGPE 182
                 G  A  V  PAD    LP+ +SL E AM          LSV  H        PE
Sbjct: 95  -----DGGFAEYVRVPADWVVPLPEGLSLRE-AMILGTAGFTAALSV--HRLEDNGQTPE 146

Query: 183 -TNVLIMGA-GPIGL--VTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQ 238
              VL+ GA G +G   V +L    +    +V +   + +    K LGA  ++    + +
Sbjct: 147 DGPVLVTGATGGVGSIAVAILAKLGY---TVVALTGKEEQADYLKSLGASEVL----DRE 199

Query: 239 DIAEEVEK-IQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM---GHLEMTV 293
           D+ +E +K + KA   G     D  G    ++  L  T+ GG V   G      L  TV
Sbjct: 200 DLLDESKKPLLKARWAGA---IDTVG-GDVLANLLKQTKYGGVVASCGNAAGPELTTTV 254

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|234026 TIGR02823, oxido_YhdH, putative quinone oxidoreductase, YhdH/YhfP family

 Score = 40.6 bits (96), Expect = 7e-04
 Identities = 68/292 (23%), Positives = 111/292 (38%), Gaps = 78/292 (26%)

Query: 28  TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF--VVKE-PMVIGHECAGV 84
           + +++  +L  L   DVL++     +  S ++Y   L       VV+  PM+ G + AG 
Sbjct: 13  SAQVETLDLSDLPEGDVLIK-----VAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGT 67

Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRC--DHCKGGRYNLCPEMKFFATPPVHGSLANQV 142
           +  V SE      GD V +    + +     H                     G  +   
Sbjct: 68  V--VSSEDPRFREGDEVIV----TGYGLGVSH--------------------DGGYSQYA 101

Query: 143 VHPADLCFKLPDNVSLEEG---------AMCEPLSVGLHACRRANIGPETN-VLIMGA-- 190
             PAD    LP+ +SL E          A    LSV   A  R  + PE   VL+ GA  
Sbjct: 102 RVPADWLVPLPEGLSLREAMALGTAGFTAA---LSV--MALERNGLTPEDGPVLVTGATG 156

Query: 191 --GPIGLVTMLGARAFGAPRIVIV----DVDDYRLSVAKELGADNIVKVSTNLQDIAEEV 244
             G +  V +L    +    +V      + +DY     KELGA  ++    + +D++   
Sbjct: 157 GVGSLA-VAILSKLGY---EVVASTGKAEEEDY----LKELGASEVI----DREDLSPPG 204

Query: 245 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM---GHLEMTV 293
           + ++K    G   + D  G   T++  L+  + GG V   G+     L  TV
Sbjct: 205 KPLEKERWAG---AVDTVG-GHTLANVLAQLKYGGAVAACGLAGGPDLPTTV 252

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc [Unknown function, Enzymes of unknown specificity]. Length = 323

>gnl|CDD|225136 COG2226, UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

 Score = 39.9 bits (94), Expect = 8e-04
 Identities = 42/169 (24%), Positives = 62/169 (36%), Gaps = 45/169 (26%)

Query: 163 MCEPLSVGLH------ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD 216
           M + +S GLH            I P   VL +  G  G + +L A++ G   +V +D+ +
Sbjct: 27  MNDLMSFGLHRLWRRALISLLGIKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISE 85

Query: 217 YRLSVAKE-LGADNIVKVSTNLQDIAEE--VEKIQKAMGTGIDVSFDCAGFNKTMSTAL- 272
             L VA+E L    +  V   + D AE               D SFD      T+S  L 
Sbjct: 86  SMLEVAREKLKKKGVQNVEFVVGD-AENLPFP----------DNSFDAV----TISFGLR 130

Query: 273 ----------SATRA---GGKVCLVGMGHLEMTVPLTPAAARYLI-YSF 307
                        R    GG++ +     LE + P  P   +  I Y F
Sbjct: 131 NVTDIDKALKEMYRVLKPGGRLLV-----LEFSKPDNPVLRKAYILYYF 174

Length = 238

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	321
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
PLN02702	364	L-idonate 5-dehydrogenase	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	100.0
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	100.0
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	100.0
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	100.0
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	100.0
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	100.0
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	100.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	100.0
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	100.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	100.0
PTZ00354	334	alcohol dehydrogenase; Provisional	100.0
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	100.0
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	100.0
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	100.0
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	100.0
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	99.98
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	99.98
cd08252	336	AL_MDR Arginate lyase and other MDR family members	99.98
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	99.98
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	99.98
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	99.98
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	99.97
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	99.97
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	99.97
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	99.97
COG2130	340	Putative NADP-dependent oxidoreductases [General f	99.97
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	99.97
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	99.97
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	99.97
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	99.97
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	99.97
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	99.96
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	99.96
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	99.96
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	99.96
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	99.96
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	99.96
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	99.96
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	99.95
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.95
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	99.95
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.94
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.93
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.9
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	99.9
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.86
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.75
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.4
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.12
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.69
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.47
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	98.39
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.39
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	98.33
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	98.29
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	98.29
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	98.11
PLN02494	477	adenosylhomocysteinase	98.08
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	97.98
PRK08324	681	short chain dehydrogenase; Validated	97.98
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	97.96
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.88
PRK05993	277	short chain dehydrogenase; Provisional	97.83
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.8
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.76
COG0300	265	DltE Short-chain dehydrogenases of various substra	97.72
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.72
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	97.69
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.69
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.6
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	97.55
PRK06182	273	short chain dehydrogenase; Validated	97.54
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	97.51
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	97.48
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	97.46
PRK05693	274	short chain dehydrogenase; Provisional	97.45
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	97.39
PRK12742	237	oxidoreductase; Provisional	97.37
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.34
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	97.33
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	97.28
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	97.25
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	97.22
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	97.18
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.15
PRK08017	256	oxidoreductase; Provisional	97.15
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	97.14
TIGR00438	188	rrmJ cell division protein FtsJ.	97.13
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	97.13
PRK12828	239	short chain dehydrogenase; Provisional	97.08
PRK07825	273	short chain dehydrogenase; Provisional	97.05
PRK07326	237	short chain dehydrogenase; Provisional	97.04
PLN03209	576	translocon at the inner envelope of chloroplast su	97.04
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	97.02
PRK07814	263	short chain dehydrogenase; Provisional	96.99
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	96.99
PRK08339	263	short chain dehydrogenase; Provisional	96.99
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.98
PRK07806	248	short chain dehydrogenase; Provisional	96.98
PRK07109	334	short chain dehydrogenase; Provisional	96.96
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	96.94
PRK06180	277	short chain dehydrogenase; Provisional	96.92
PRK08265	261	short chain dehydrogenase; Provisional	96.92
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	96.91
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	96.91
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	96.91
PRK12939	250	short chain dehydrogenase; Provisional	96.91
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	96.9
PRK08267	260	short chain dehydrogenase; Provisional	96.9
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	96.89
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	96.88
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	96.87
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	96.86
PRK06139	330	short chain dehydrogenase; Provisional	96.84
PRK14967	223	putative methyltransferase; Provisional	96.83
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	96.81
PRK05872	296	short chain dehydrogenase; Provisional	96.8
PRK08618	325	ornithine cyclodeaminase; Validated	96.79
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.79
PRK06500	249	short chain dehydrogenase; Provisional	96.77
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.76
PRK06057	255	short chain dehydrogenase; Provisional	96.75
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	96.75
PRK09072	263	short chain dehydrogenase; Provisional	96.75
PRK04148	134	hypothetical protein; Provisional	96.72
PRK07832	272	short chain dehydrogenase; Provisional	96.72
PRK07576	264	short chain dehydrogenase; Provisional	96.71
PRK06484	520	short chain dehydrogenase; Validated	96.69
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.67
PRK09186	256	flagellin modification protein A; Provisional	96.67
PRK07060	245	short chain dehydrogenase; Provisional	96.65
PRK07062	265	short chain dehydrogenase; Provisional	96.64
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	96.62
PRK06949	258	short chain dehydrogenase; Provisional	96.6
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	96.59
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	96.59
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	96.57
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.54
PRK06198	260	short chain dehydrogenase; Provisional	96.53
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	96.53
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.53
PRK07904	253	short chain dehydrogenase; Provisional	96.53
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	96.53
PRK06128	300	oxidoreductase; Provisional	96.52
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	96.51
PRK05866	293	short chain dehydrogenase; Provisional	96.51
PRK08085	254	gluconate 5-dehydrogenase; Provisional	96.5
PRK06179	270	short chain dehydrogenase; Provisional	96.47
PRK09242	257	tropinone reductase; Provisional	96.46
PRK07831	262	short chain dehydrogenase; Provisional	96.44
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	96.44
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	96.44
PRK05884	223	short chain dehydrogenase; Provisional	96.43
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	96.42
PRK12829	264	short chain dehydrogenase; Provisional	96.42
PRK08177	225	short chain dehydrogenase; Provisional	96.42
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	96.42
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	96.42
PRK06841	255	short chain dehydrogenase; Provisional	96.41
PRK12937	245	short chain dehydrogenase; Provisional	96.4
PRK07402	196	precorrin-6B methylase; Provisional	96.39
PRK08263	275	short chain dehydrogenase; Provisional	96.38
PRK07677	252	short chain dehydrogenase; Provisional	96.38
PRK06398	258	aldose dehydrogenase; Validated	96.38
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	96.35
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.35
PRK08862	227	short chain dehydrogenase; Provisional	96.35
PRK10538	248	malonic semialdehyde reductase; Provisional	96.33
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.3
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	96.29
PRK06101	240	short chain dehydrogenase; Provisional	96.28
PRK05867	253	short chain dehydrogenase; Provisional	96.28
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	96.28
PRK07774	250	short chain dehydrogenase; Provisional	96.27
PRK07985	294	oxidoreductase; Provisional	96.27
CHL00194	317	ycf39 Ycf39; Provisional	96.26
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	96.26
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	96.24
PRK06484	520	short chain dehydrogenase; Validated	96.24
PRK08317	241	hypothetical protein; Provisional	96.22
PRK00811	283	spermidine synthase; Provisional	96.21
COG4122	219	Predicted O-methyltransferase [General function pr	96.21
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.2
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	96.19
PRK12747	252	short chain dehydrogenase; Provisional	96.19
PRK08628	258	short chain dehydrogenase; Provisional	96.19
PRK08703	239	short chain dehydrogenase; Provisional	96.18
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.16
PRK07024	257	short chain dehydrogenase; Provisional	96.15
PRK06124	256	gluconate 5-dehydrogenase; Provisional	96.15
PRK09291	257	short chain dehydrogenase; Provisional	96.15
PRK06701	290	short chain dehydrogenase; Provisional	96.14
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.11
PRK06483	236	dihydromonapterin reductase; Provisional	96.11
PRK06196	315	oxidoreductase; Provisional	96.11
PRK04457	262	spermidine synthase; Provisional	96.1
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.09
PLN02366	308	spermidine synthase	96.09
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.09
PRK08589	272	short chain dehydrogenase; Validated	96.08
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	96.08
PF06325	295	PrmA: Ribosomal protein L11 methyltransferase (Prm	96.05
PRK07453	322	protochlorophyllide oxidoreductase; Validated	96.05
PRK07478	254	short chain dehydrogenase; Provisional	96.03
PLN02780	320	ketoreductase/ oxidoreductase	96.03
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.02
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	96.02
PRK07523	255	gluconate 5-dehydrogenase; Provisional	96.0
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	96.0
COG2910	211	Putative NADH-flavin reductase [General function p	95.99
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.98
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	95.98
PRK06194	287	hypothetical protein; Provisional	95.97
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	95.97
PRK07454	241	short chain dehydrogenase; Provisional	95.97
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.97
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.96
PRK05854	313	short chain dehydrogenase; Provisional	95.96
PRK08340	259	glucose-1-dehydrogenase; Provisional	95.95
PRK08643	256	acetoin reductase; Validated	95.91
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	95.9
TIGR00417	270	speE spermidine synthase. the SpeE subunit of sper	95.9
PRK07063	260	short chain dehydrogenase; Provisional	95.89
PRK12746	254	short chain dehydrogenase; Provisional	95.87
PRK07340	304	ornithine cyclodeaminase; Validated	95.85
PF01408	120	GFO_IDH_MocA: Oxidoreductase family, NAD-binding R	95.85
PRK05875	276	short chain dehydrogenase; Provisional	95.84
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	95.84
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	95.83
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	95.83
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	95.81
PRK05717	255	oxidoreductase; Validated	95.81
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	95.8
PRK07890	258	short chain dehydrogenase; Provisional	95.79
PRK06953	222	short chain dehydrogenase; Provisional	95.79
PLN02253	280	xanthoxin dehydrogenase	95.79
PRK07035	252	short chain dehydrogenase; Provisional	95.78
PRK05650	270	short chain dehydrogenase; Provisional	95.77
PRK13940	414	glutamyl-tRNA reductase; Provisional	95.77
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	95.76
PRK06172	253	short chain dehydrogenase; Provisional	95.75
PRK06482	276	short chain dehydrogenase; Provisional	95.74
PRK08213	259	gluconate 5-dehydrogenase; Provisional	95.74
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	95.73
PRK01581	374	speE spermidine synthase; Validated	95.73
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	95.73
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	95.71
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	95.71
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	95.7
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	95.69
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	95.69
PRK12938	246	acetyacetyl-CoA reductase; Provisional	95.68
PRK06138	252	short chain dehydrogenase; Provisional	95.68
PRK06940	275	short chain dehydrogenase; Provisional	95.68
COG3288	356	PntA NAD/NADP transhydrogenase alpha subunit [Ener	95.67
PLN02823	336	spermine synthase	95.66
PRK07074	257	short chain dehydrogenase; Provisional	95.64
PLN03075	296	nicotianamine synthase; Provisional	95.64
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.64
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	95.63
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	95.63
PRK08226	263	short chain dehydrogenase; Provisional	95.63
PRK06181	263	short chain dehydrogenase; Provisional	95.62
PRK08277	278	D-mannonate oxidoreductase; Provisional	95.62
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	95.6
PRK06197	306	short chain dehydrogenase; Provisional	95.59
PRK06720	169	hypothetical protein; Provisional	95.59
PRK08264	238	short chain dehydrogenase; Validated	95.57
TIGR03215	285	ac_ald_DH_ac acetaldehyde dehydrogenase (acetylati	95.56
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.55
PRK12743	256	oxidoreductase; Provisional	95.55
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	95.55
PRK07067	257	sorbitol dehydrogenase; Provisional	95.54
cd05211	217	NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of	95.53
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.52
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	95.52
PRK06114	254	short chain dehydrogenase; Provisional	95.51
PRK08328	231	hypothetical protein; Provisional	95.5
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	95.5
PLN02476	278	O-methyltransferase	95.49
PRK08287	187	cobalt-precorrin-6Y C(15)-methyltransferase; Valid	95.49
PRK08251	248	short chain dehydrogenase; Provisional	95.48
PRK06125	259	short chain dehydrogenase; Provisional	95.48
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	95.48
PRK05876	275	short chain dehydrogenase; Provisional	95.47
PRK06141	314	ornithine cyclodeaminase; Validated	95.47
TIGR00138	181	gidB 16S rRNA methyltransferase GidB. GidB (glucos	95.47
PRK07856	252	short chain dehydrogenase; Provisional	95.46
COG0421	282	SpeE Spermidine synthase [Amino acid transport and	95.46
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	95.45
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	95.45
PRK14103	255	trans-aconitate 2-methyltransferase; Provisional	95.44
PRK11207	197	tellurite resistance protein TehB; Provisional	95.44
PRK04266	226	fibrillarin; Provisional	95.44
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.43
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	95.43
PRK07574	385	formate dehydrogenase; Provisional	95.39
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	95.38
PRK08300	302	acetaldehyde dehydrogenase; Validated	95.37
PRK13255	218	thiopurine S-methyltransferase; Reviewed	95.36
PRK15116	268	sulfur acceptor protein CsdL; Provisional	95.36
PRK06914	280	short chain dehydrogenase; Provisional	95.36
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.35
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	95.34
PRK01683	258	trans-aconitate 2-methyltransferase; Provisional	95.32
PRK07069	251	short chain dehydrogenase; Validated	95.29
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.28
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	95.27
PRK06523	260	short chain dehydrogenase; Provisional	95.25
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	95.24
PRK12744	257	short chain dehydrogenase; Provisional	95.24
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	95.23
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	95.22
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	95.22
PRK00121	202	trmB tRNA (guanine-N(7)-)-methyltransferase; Revie	95.22
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	95.22
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	95.2
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	95.18
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	95.18
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	95.17
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	95.17
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	95.16
PRK12367	245	short chain dehydrogenase; Provisional	95.16
COG0031	300	CysK Cysteine synthase [Amino acid transport and m	95.15
PRK07097	265	gluconate 5-dehydrogenase; Provisional	95.12
KOG0725	270	consensus Reductases with broad range of substrate	95.1
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	95.1
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	95.08
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.05
PLN02244	340	tocopherol O-methyltransferase	95.04
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	95.02
TIGR00477	195	tehB tellurite resistance protein TehB. Part of a	95.02
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	95.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	94.99
PRK09134	258	short chain dehydrogenase; Provisional	94.97
PRK07577	234	short chain dehydrogenase; Provisional	94.97
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	94.97
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	94.96
PRK07775	274	short chain dehydrogenase; Provisional	94.95
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	94.94
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	94.93
PLN02256	304	arogenate dehydrogenase	94.93
PLN03139	386	formate dehydrogenase; Provisional	94.92
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	94.9
PRK08303	305	short chain dehydrogenase; Provisional	94.9
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.89
TIGR02992	326	ectoine_eutC ectoine utilization protein EutC. Mem	94.87
PRK13243	333	glyoxylate reductase; Reviewed	94.84
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	94.83
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	94.82
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	94.8
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	94.79
KOG2017	427	consensus Molybdopterin synthase sulfurylase [Coen	94.75
PLN02781	234	Probable caffeoyl-CoA O-methyltransferase	94.75
PRK08291	330	ectoine utilization protein EutC; Validated	94.73
TIGR00563	426	rsmB ribosomal RNA small subunit methyltransferase	94.72
PRK07791	286	short chain dehydrogenase; Provisional	94.72
PRK08936	261	glucose-1-dehydrogenase; Provisional	94.71
PRK12548	289	shikimate 5-dehydrogenase; Provisional	94.71
PRK03612	521	spermidine synthase; Provisional	94.71
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	94.69
PLN02233	261	ubiquinone biosynthesis methyltransferase	94.67
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	94.67
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.65
PF01596	205	Methyltransf_3: O-methyltransferase; InterPro: IPR	94.65
TIGR02752	231	MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me	94.64
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	94.62
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	94.59
PRK05855	582	short chain dehydrogenase; Validated	94.59
PRK07417	279	arogenate dehydrogenase; Reviewed	94.58
TIGR02415	254	23BDH acetoin reductases. One member of this famil	94.55
PRK12769	654	putative oxidoreductase Fe-S binding subunit; Revi	94.54
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	94.53
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.52
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	94.52
PRK06947	248	glucose-1-dehydrogenase; Provisional	94.51
PF13823	23	ADH_N_assoc: Alcohol dehydrogenase GroES-associate	94.5
PRK00536	262	speE spermidine synthase; Provisional	94.49
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	94.49
PRK09135	249	pteridine reductase; Provisional	94.45
PRK00216	239	ubiE ubiquinone/menaquinone biosynthesis methyltra	94.45
PLN02928	347	oxidoreductase family protein	94.45
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	94.41
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	94.41
PRK08655	437	prephenate dehydrogenase; Provisional	94.39
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	94.36
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	94.33
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	94.33
PRK10669	558	putative cation:proton antiport protein; Provision	94.32
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	94.31
PF08704	247	GCD14: tRNA methyltransferase complex GCD14 subuni	94.3
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	94.3
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	94.3
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	94.26
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	94.24
PRK05562	223	precorrin-2 dehydrogenase; Provisional	94.19
PRK05599	246	hypothetical protein; Provisional	94.18
PRK06849	389	hypothetical protein; Provisional	94.17
PRK07102	243	short chain dehydrogenase; Provisional	94.17
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.16
PRK08278	273	short chain dehydrogenase; Provisional	94.14
PRK12935	247	acetoacetyl-CoA reductase; Provisional	94.12
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	94.11
PRK03562	621	glutathione-regulated potassium-efflux system prot	94.1
TIGR01532	325	E4PD_g-proteo D-erythrose-4-phosphate dehydrogenas	94.09
PRK05134	233	bifunctional 3-demethylubiquinone-9 3-methyltransf	94.09
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	94.06
PLN02490	340	MPBQ/MSBQ methyltransferase	94.04
PRK07411	390	hypothetical protein; Validated	94.04
PLN00203	519	glutamyl-tRNA reductase	94.02
PRK06123	248	short chain dehydrogenase; Provisional	94.0
PRK10258	251	biotin biosynthesis protein BioC; Provisional	93.99
PRK14901	434	16S rRNA methyltransferase B; Provisional	93.99
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	93.97
TIGR00446	264	nop2p NOL1/NOP2/sun family putative RNA methylase.	93.94
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	93.92
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	93.92
PLN02589	247	caffeoyl-CoA O-methyltransferase	93.92
PRK11761	296	cysM cysteine synthase B; Provisional	93.87

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=1.9e-58  Score=411.01  Aligned_cols=290  Identities=31%  Similarity=0.445  Sum_probs=260.8

Q ss_pred             hhhceeEEEccCC-CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCC
Q 020768           15 EEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (321)
Q Consensus        15 ~~~~~a~~~~~~~-~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~   93 (321)
                      +++|||+++.+.+ ++++.|++.|+|+++||+|||+|+|+|++|++.++|.++.   ..+|++||||++|+|+++|++|+
T Consensus         1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~---~~~P~ipGHEivG~V~~vG~~V~   77 (339)
T COG1064           1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPV---PKLPLIPGHEIVGTVVEVGEGVT   77 (339)
T ss_pred             CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCC---CCCCccCCcceEEEEEEecCCCc
Confidence            4689999998764 4999999999999999999999999999999999987754   35899999999999999999999


Q ss_pred             CCCCCCEEEE-cCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHH
Q 020768           94 TLVPGDRVAL-EPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGL  171 (321)
Q Consensus        94 ~~~~Gd~V~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~  171 (321)
                      +|++||||.+ ....+|++|.||+.++.++|++....+. +.+|+|+||+++++++++++|+++++.+||.+. ...|+|
T Consensus        78 ~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy-~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y  156 (339)
T COG1064          78 GLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGY-TTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTY  156 (339)
T ss_pred             cCCCCCEEEecCccCCCCCCccccCcccccCCCccccce-eecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEe
Confidence            9999999999 7788999999999999999999666554 699999999999999999999999999999664 667889


Q ss_pred             HHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768          172 HACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       172 ~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      ++++..+++||++|+|.|+|++|++++|+|+++|+ .|++++++++|+++++++|++++++..  +.++.+.+.+     
T Consensus       157 ~alk~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~~~--~~~~~~~~~~-----  228 (339)
T COG1064         157 RALKKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVINSS--DSDALEAVKE-----  228 (339)
T ss_pred             eehhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEEcC--CchhhHHhHh-----
Confidence            99999999999999999999999999999999997 799999999999999999999999854  3444444433     


Q ss_pred             CCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCC-CC-ccccchhhhccceEEEEeehhHHHhhccc
Q 020768          252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-LE-MTVPLTPAAARYLIYSFLFHFFLIVLGYS  319 (321)
Q Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~-~~~~~~~~~~k~~~i~g~~~~~~~~~~~~  319 (321)
                        .+|++||+++ +.+++.+++.|+++|+++++|... .+ ..++...+++++++|.|++.++.+++-+|
T Consensus       229 --~~d~ii~tv~-~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~~d~~e~  295 (339)
T COG1064         229 --IADAIIDTVG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADLEEA  295 (339)
T ss_pred             --hCcEEEECCC-hhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCHHHHHHH
Confidence              2999999999 899999999999999999999884 43 55888889999999999999988877654

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=5.2e-58  Score=396.67  Aligned_cols=304  Identities=51%  Similarity=0.841  Sum_probs=278.2

Q ss_pred             hhhceeEEEccCCCeEEEEecCCCC-CCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCC
Q 020768           15 EEVNMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (321)
Q Consensus        15 ~~~~~a~~~~~~~~l~~~e~~~p~~-~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~   93 (321)
                      ..+|+|+++.+++.+++++.|.|++ +|+||+|++.++|||.+|++.+.+...+.+..+.|+++|||.+|+|+++|+.|+
T Consensus         2 ~~~~~A~vl~g~~di~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk   81 (354)
T KOG0024|consen    2 AADNLALVLRGKGDIRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVK   81 (354)
T ss_pred             CcccceeEEEccCceeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccccc
Confidence            4679999999999999999999988 999999999999999999999998777776677899999999999999999999


Q ss_pred             CCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHH
Q 020768           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHA  173 (321)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~  173 (321)
                      ++++||||++.|..+|+.|.+|+.|++|+|+++.+.+..+.+|++++|++.+++.|+++|++++++++|+++++++++||
T Consensus        82 ~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~ePLsV~~HA  161 (354)
T KOG0024|consen   82 HLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIEPLSVGVHA  161 (354)
T ss_pred             ccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhcccccchhhhhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhC-
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG-  252 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~-  252 (321)
                      .+++++++|++|||+|||++|+++...||++|++.|++++..++|++++++||++.+.+..... ...+..+.+.+..+ 
T Consensus       162 cr~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~-~~~~~~~~v~~~~g~  240 (354)
T KOG0024|consen  162 CRRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKS-SPQELAELVEKALGK  240 (354)
T ss_pred             hhhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccc-cHHHHHHHHHhhccc
Confidence            9999999999999999999999999999999999999999999999999999999887755433 22222222323223 


Q ss_pred             CCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehhHHHhhccc
Q 020768          253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFLIVLGYS  319 (321)
Q Consensus       253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~  319 (321)
                      ..+|++|||+|-..+++.++..++.+|+++++|+-....++++.....|+++++|+|+|..+.+...
T Consensus       241 ~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v~~kE~~~~g~fry~~~~y~~a  307 (354)
T KOG0024|consen  241 KQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDVALKEVDLRGSFRYCNGDYPTA  307 (354)
T ss_pred             cCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhhhhheeeeeeeeeeccccHHHH
Confidence            5599999999999999999999999999999998888899999999999999999999988766543

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-48  Score=357.06  Aligned_cols=287  Identities=31%  Similarity=0.540  Sum_probs=247.7

Q ss_pred             hhhceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768           15 EEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (321)
Q Consensus        15 ~~~~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~   94 (321)
                      -..+|++++.+++.+++++.|.| ++++||||||.++++|++|++.+.+...+.....+|.++|||++|+|+++  ++++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~   78 (343)
T PRK09880          2 QVKTQSCVVAGKKDVAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSG   78 (343)
T ss_pred             cccceEEEEecCCceEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCcc
Confidence            35689999999999999999997 68999999999999999999987633222222457999999999999999  7889


Q ss_pred             CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccC----CCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHH
Q 020768           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP----PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG  170 (321)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a  170 (321)
                      |++||+|.+.+..+|++|.+|..+.+++|.+...++..    ..+|+|+||++++++.++++|++++++++++..+++++
T Consensus        79 ~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~a  158 (343)
T PRK09880         79 LKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMAFAEPLAVA  158 (343)
T ss_pred             CCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHHhhcHHHHH
Confidence            99999999999999999999999999999987665431    35799999999999999999999999888877889999


Q ss_pred             HHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHH
Q 020768          171 LHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA  250 (321)
Q Consensus       171 ~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~  250 (321)
                      |+++++....+|++|+|+|+|++|++++|+|+++|+++|++++++++|+++++++|++.++++++  .++.+    +...
T Consensus       159 ~~al~~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~--~~~~~----~~~~  232 (343)
T PRK09880        159 IHAAHQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQN--DDLDH----YKAE  232 (343)
T ss_pred             HHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCc--ccHHH----Hhcc
Confidence            99998877789999999999999999999999999977999999999999999999999988654  23322    2211


Q ss_pred             hCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehh
Q 020768          251 MGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF  311 (321)
Q Consensus       251 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~  311 (321)
                       .+++|++|||+|++..++.++++++++|+++.+|......++++..++.|++++.|+..+
T Consensus       233 -~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~  292 (343)
T PRK09880        233 -KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGSFRF  292 (343)
T ss_pred             -CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHHhCCcEEEEEeec
Confidence             246999999999877899999999999999999976655678888889999999998753

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=3.5e-48  Score=338.39  Aligned_cols=286  Identities=29%  Similarity=0.458  Sum_probs=247.0

Q ss_pred             hceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCC
Q 020768           17 VNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (321)
Q Consensus        17 ~~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~   95 (321)
                      ++|+++..++ ++|+++|++++.|+++|||||+.|+|+||+|...++|.++    ..+|.++|||++|+|+++|++|+++
T Consensus         2 k~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p----~~~P~vLGHEgAGiVe~VG~gVt~v   77 (366)
T COG1062           2 KTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDP----EGFPAVLGHEGAGIVEAVGEGVTSV   77 (366)
T ss_pred             CceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCC----CCCceecccccccEEEEecCCcccc
Confidence            5788888754 7899999999999999999999999999999999998765    4589999999999999999999999


Q ss_pred             CCCCEEEEcCCccCCCCccccCCCCCCCCCccc-------ccc-----------CCC--CCcceeEEEecCCcEEECCCC
Q 020768           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF-------FAT-----------PPV--HGSLANQVVHPADLCFKLPDN  155 (321)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~-----------~~~--~G~~~~~~~v~~~~~~~ip~~  155 (321)
                      ++||+|+..+..+|++|+.|..+++++|.....       ..+           ...  .++|+||.++++..+++++++
T Consensus        78 kpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~  157 (366)
T COG1062          78 KPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPD  157 (366)
T ss_pred             CCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCC
Confidence            999999999999999999999999999963210       000           112  259999999999999999999


Q ss_pred             CChhhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEec
Q 020768          156 VSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV  233 (321)
Q Consensus       156 ~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~  233 (321)
                      .+++.++++. ...|.+.+. +.+++++|++|.|.|.|++|++++|-|+..|+.++|+++.+++|++++++||+++++|.
T Consensus       158 ~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~  237 (366)
T COG1062         158 APLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNP  237 (366)
T ss_pred             CCccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecc
Confidence            9999999886 455667654 77999999999999999999999999999999999999999999999999999999985


Q ss_pred             CCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchh--hhccceEEEEeehh
Q 020768          234 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTP--AAARYLIYSFLFHF  311 (321)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~--~~~k~~~i~g~~~~  311 (321)
                      .+.. +..+.+.++   .++|+|++|||+|+.+.+++++.++.++|+.+++|..+...++++.+  |. .+.+++|+...
T Consensus       238 ~~~~-~vv~~i~~~---T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv-~gr~~~Gs~~G  312 (366)
T COG1062         238 KEVD-DVVEAIVEL---TDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLV-TGRVWKGSAFG  312 (366)
T ss_pred             hhhh-hHHHHHHHh---cCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHee-ccceEEEEeec
Confidence            4322 455555554   45699999999999999999999999999999999887766666555  44 45889988764

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=4e-48  Score=334.41  Aligned_cols=298  Identities=27%  Similarity=0.358  Sum_probs=250.4

Q ss_pred             ccchhhceeEEEccC-C--CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEe
Q 020768           12 EDGEEVNMAAWLLGV-N--TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV   88 (321)
Q Consensus        12 ~~~~~~~~a~~~~~~-~--~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~v   88 (321)
                      ...|++.++..+.++ +  .+++.+++.|+|+++||+|||+++|+|++|++.+.|.+..   ..+|.++|||++|+|+++
T Consensus         4 ~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~---s~~PlV~GHEiaG~Vvkv   80 (360)
T KOG0023|consen    4 MSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGL---SKYPLVPGHEIAGVVVKV   80 (360)
T ss_pred             ccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCc---ccCCccCCceeeEEEEEE
Confidence            456778888888754 3  6777999999999999999999999999999999986532   688999999999999999


Q ss_pred             CCCCCCCCCCCEEEEcC-CccCCCCccccCCCCCCCCCccccc------cCCCCCcceeEEEecCCcEEECCCCCChhhh
Q 020768           89 GSEVKTLVPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKLPDNVSLEEG  161 (321)
Q Consensus        89 G~~v~~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~a  161 (321)
                      |++|++|++||+|.+-. ..+|.+|.+|..+..++|++.-+..      +..++|+|++|+++++..+++||++++.++|
T Consensus        81 Gs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~a  160 (360)
T KOG0023|consen   81 GSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASA  160 (360)
T ss_pred             CCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhc
Confidence            99999999999998854 5599999999999999999644322      2345677999999999999999999999999


Q ss_pred             ccch-hhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh-hHHHHHHHcCCCeEEecCCCccc
Q 020768          162 AMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-YRLSVAKELGADNIVKVSTNLQD  239 (321)
Q Consensus       162 a~~~-~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~-~~~~~~~~~g~~~vi~~~~~~~~  239 (321)
                      |.+. ..-|.|.++.+.++.||+++.|.|+|++|++++|+||++|. +|++++++. +|++..+.||++..++..+ +++
T Consensus       161 APlLCaGITvYspLk~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~LGAd~fv~~~~-d~d  238 (360)
T KOG0023|consen  161 APLLCAGITVYSPLKRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSLGADVFVDSTE-DPD  238 (360)
T ss_pred             cchhhcceEEeehhHHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhcCcceeEEecC-CHH
Confidence            9655 44567889999999999999999997799999999999999 677887776 7777788899999887543 345


Q ss_pred             HHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehhHHHhhccc
Q 020768          240 IAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFLIVLGYS  319 (321)
Q Consensus       240 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~  319 (321)
                      +.+.+.   ++...++|-|.+.  ....++.+++.|+.+|+++++|.+..+..+++-+++.++++|.|+...+..+..+|
T Consensus       239 ~~~~~~---~~~dg~~~~v~~~--a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil~~~~I~GS~vG~~ket~E~  313 (360)
T KOG0023|consen  239 IMKAIM---KTTDGGIDTVSNL--AEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTFPLILGRKSIKGSIVGSRKETQEA  313 (360)
T ss_pred             HHHHHH---HhhcCcceeeeec--cccchHHHHHHhhcCCEEEEEeCcCCcccccchhhhcccEEEEeeccccHHHHHHH
Confidence            444443   3445556666554  45788999999999999999999988899999999999999999988777665544

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=9e-47  Score=324.54  Aligned_cols=295  Identities=26%  Similarity=0.378  Sum_probs=256.5

Q ss_pred             chhhceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCC
Q 020768           14 GEEVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (321)
Q Consensus        14 ~~~~~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v   92 (321)
                      ...++||++.-++ .+|.++|+..++|+.+||+||++++++|++|...++|..+.   ..+|.++|||++|+|+.+|++|
T Consensus         4 kvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~---~~fP~IlGHEaaGIVESvGegV   80 (375)
T KOG0022|consen    4 KVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPE---GLFPVILGHEAAGIVESVGEGV   80 (375)
T ss_pred             CceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCcc---ccCceEecccceeEEEEecCCc
Confidence            3567999998765 68999999999999999999999999999999999986532   5789999999999999999999


Q ss_pred             CCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccc--------c-------------CCCCCcceeEEEecCCcEEE
Q 020768           93 KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA--------T-------------PPVHGSLANQVVHPADLCFK  151 (321)
Q Consensus        93 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-------------~~~~G~~~~~~~v~~~~~~~  151 (321)
                      +.+++||+|+..+...|++|.+|++++.|+|.......        +             .-...+|+||.++++..+.+
T Consensus        81 ~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~k  160 (375)
T KOG0022|consen   81 TTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAK  160 (375)
T ss_pred             cccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEe
Confidence            99999999999999999999999999999996432211        1             11224999999999999999


Q ss_pred             CCCCCChhhhccch-hhHHHHHH-HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCe
Q 020768          152 LPDNVSLEEGAMCE-PLSVGLHA-CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN  229 (321)
Q Consensus       152 ip~~~~~~~aa~~~-~~~~a~~~-l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~  229 (321)
                      |++..+++.++++. .++|+|.| ++.+++++|+++.|+|.|++|+++++-||+.|++++|++|-+++|.+++++||+++
T Consensus       161 Id~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe  240 (375)
T KOG0022|consen  161 IDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATE  240 (375)
T ss_pred             cCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcce
Confidence            99999999999886 67788866 47899999999999999999999999999999999999999999999999999999


Q ss_pred             EEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccC-CEEEEEcCCCCCccccchh-hhccceEEEE
Q 020768          230 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHLEMTVPLTP-AAARYLIYSF  307 (321)
Q Consensus       230 vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~-~~~k~~~i~g  307 (321)
                      ++|..+......+.+.++   .++|+|+.|||.|+.+++++++.+...+ |+-+++|......++++.+ .+.++.++.|
T Consensus       241 ~iNp~d~~~~i~evi~Em---TdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~G  317 (375)
T KOG0022|consen  241 FINPKDLKKPIQEVIIEM---TDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKG  317 (375)
T ss_pred             ecChhhccccHHHHHHHH---hcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEE
Confidence            998764333456666665   3689999999999999999999999999 9999999887766776666 2457888888


Q ss_pred             eehhHHH
Q 020768          308 LFHFFLI  314 (321)
Q Consensus       308 ~~~~~~~  314 (321)
                      +....|.
T Consensus       318 s~FGG~K  324 (375)
T KOG0022|consen  318 SAFGGFK  324 (375)
T ss_pred             Eeccccc
Confidence            8876543

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=5.1e-46  Score=341.96  Aligned_cols=288  Identities=33%  Similarity=0.540  Sum_probs=247.0

Q ss_pred             ceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCC
Q 020768           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (321)
Q Consensus        18 ~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~   97 (321)
                      |||+++.+++.++++++|.|.|+++||+|||.++++|++|++.+.+.+..  ...+|.++|||++|+|+++|++|+.|++
T Consensus         1 mka~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~   78 (339)
T cd08239           1 MRGAVFPGDRTVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRA--PAYQGVIPGHEPAGVVVAVGPGVTHFRV   78 (339)
T ss_pred             CeEEEEecCCceEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCc--cCCCCceeccCceEEEEEECCCCccCCC
Confidence            78999998889999999999999999999999999999999988765322  1235889999999999999999999999


Q ss_pred             CCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHHHHH
Q 020768           98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACRR  176 (321)
Q Consensus        98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l~~  176 (321)
                      ||+|++.+..+|++|++|..++.++|.+.....+...+|+|+||+.+++++++++|+++++.+|+.+. ++.++|++++.
T Consensus        79 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~  158 (339)
T cd08239          79 GDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHALRR  158 (339)
T ss_pred             CCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHh
Confidence            99999999999999999999999999876542223467999999999999999999999999988664 77899999988


Q ss_pred             cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      +.+++|++|||+|+|++|++++|+|+++|++.|++++++++|.++++++|++.++++++  .+ .+.+.++.  .+.++|
T Consensus       159 ~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~--~~-~~~~~~~~--~~~~~d  233 (339)
T cd08239         159 VGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQ--DD-VQEIRELT--SGAGAD  233 (339)
T ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc--ch-HHHHHHHh--CCCCCC
Confidence            88999999999999999999999999999965888999999999999999999887643  23 34444432  345899


Q ss_pred             EEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccc-hhhhccceEEEEeehhHH
Q 020768          257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPL-TPAAARYLIYSFLFHFFL  313 (321)
Q Consensus       257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~k~~~i~g~~~~~~  313 (321)
                      ++|||+|+...+..++++|+++|+++.+|.... .+++. ..++.|++++.|++.+..
T Consensus       234 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~  290 (339)
T cd08239         234 VAIECSGNTAARRLALEAVRPWGRLVLVGEGGE-LTIEVSNDLIRKQRTLIGSWYFSV  290 (339)
T ss_pred             EEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCC-cccCcHHHHHhCCCEEEEEecCCH
Confidence            999999998777899999999999999997543 23443 357889999999887543

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=1.3e-46  Score=346.00  Aligned_cols=285  Identities=35%  Similarity=0.575  Sum_probs=236.7

Q ss_pred             ceeEEEccCC-CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCc-ccccceeEEEEEeCCCCCCC
Q 020768           18 NMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPM-VIGHECAGVIEKVGSEVKTL   95 (321)
Q Consensus        18 ~~a~~~~~~~-~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~-~~G~e~vG~V~~vG~~v~~~   95 (321)
                      ||++++..+. ..++++.+.|.++++||+|||.++|||.+|++.+++..+.   ...|. ++|||++|+|+++| .++.+
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~---~~~~~~i~GHE~~G~V~evG-~~~~~   76 (350)
T COG1063           1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPF---VPPGDIILGHEFVGEVVEVG-VVRGF   76 (350)
T ss_pred             CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCC---CCCCCcccCccceEEEEEec-cccCC
Confidence            6777777654 4448888888889999999999999999999999985432   23344 99999999999999 77889


Q ss_pred             CCCCEEEEcCCccCCCCccccCCCCCCCCCccccccC----CCCCcceeEEEecCCcEEEC-CCCCChhhhccchhhHHH
Q 020768           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP----PVHGSLANQVVHPADLCFKL-PDNVSLEEGAMCEPLSVG  170 (321)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~G~~~~~~~v~~~~~~~i-p~~~~~~~aa~~~~~~~a  170 (321)
                      ++||||++.+..+|++|++|+.+.+++|.+..+++..    ..+|+|+||+.+|.++.+.+ |++++.++|++.++++++
T Consensus        77 ~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~~~~~aal~epla~~  156 (350)
T COG1063          77 KVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGIDEEAAALTEPLATA  156 (350)
T ss_pred             CCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCCChhhhhhcChhhhh
Confidence            9999999999999999999999999999976655432    26899999999997666665 677788888899999999


Q ss_pred             HHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH-cCCCeEEecCCCcccHHHHHHHHH
Q 020768          171 LHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGADNIVKVSTNLQDIAEEVEKIQ  248 (321)
Q Consensus       171 ~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~~~~~  248 (321)
                      +++. .....+++++|+|+|+|++|++++++++.+|+++|++++.+++|++++++ +|++.+++....  +....+.++ 
T Consensus       157 ~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~--~~~~~~~~~-  233 (350)
T COG1063         157 YHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSED--DAGAEILEL-  233 (350)
T ss_pred             hhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccc--cHHHHHHHH-
Confidence            8774 44555666699999999999999999999999999999999999999999 555555543221  333333333 


Q ss_pred             HHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCc-cccchhhhccceEEEEeeh
Q 020768          249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEM-TVPLTPAAARYLIYSFLFH  310 (321)
Q Consensus       249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~k~~~i~g~~~  310 (321)
                       +.+.++|++|||+|.+..+..++++++++|+++++|...... .++...++.|++++.|++.
T Consensus       234 -t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~  295 (350)
T COG1063         234 -TGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLR  295 (350)
T ss_pred             -hCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccC
Confidence             345689999999999989999999999999999999887765 6888889999999999955

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=4.8e-46  Score=347.29  Aligned_cols=293  Identities=26%  Similarity=0.389  Sum_probs=246.3

Q ss_pred             chhhceeEEEccCC-CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCC
Q 020768           14 GEEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (321)
Q Consensus        14 ~~~~~~a~~~~~~~-~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v   92 (321)
                      .+.+||++++.+++ .+.++|+|.|.|+++||+|||.++++|++|++.+.|....  ...+|.++|||++|+|+++|+++
T Consensus         7 ~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~--~~~~p~i~GhE~~G~V~~vG~~v   84 (381)
T PLN02740          7 KVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEA--QRAYPRILGHEAAGIVESVGEGV   84 (381)
T ss_pred             cceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcc--cCCCCccccccceEEEEEeCCCC
Confidence            45679999998775 5889999999999999999999999999999998875421  13568999999999999999999


Q ss_pred             CCCCCCCEEEEcCCccCCCCccccCCCCCCCCCcccccc-----------------------CCCCCcceeEEEecCCcE
Q 020768           93 KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT-----------------------PPVHGSLANQVVHPADLC  149 (321)
Q Consensus        93 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~G~~~~~~~v~~~~~  149 (321)
                      ++|++||+|++.+..+|+.|.+|+.+.+++|.+....+.                       ...+|+|+||++++.+.+
T Consensus        85 ~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~  164 (381)
T PLN02740         85 EDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACV  164 (381)
T ss_pred             CcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHe
Confidence            999999999999999999999999999999988643210                       012699999999999999


Q ss_pred             EECCCCCChhhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCC
Q 020768          150 FKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA  227 (321)
Q Consensus       150 ~~ip~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~  227 (321)
                      +++|+++++++++.+. ++.++|+++ +.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|.++++++|+
T Consensus       165 ~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga  244 (381)
T PLN02740        165 VKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGI  244 (381)
T ss_pred             EECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCC
Confidence            9999999999888665 677888876 56889999999999999999999999999999668999999999999999999


Q ss_pred             CeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccC-CEEEEEcCCCCCccccchhh-hccceEE
Q 020768          228 DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHLEMTVPLTPA-AARYLIY  305 (321)
Q Consensus       228 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~-~~k~~~i  305 (321)
                      +.+++..+...++.+.++++.   ++++|++||++|++..+..++.+++++ |+++.+|.......+++.++ +.++++|
T Consensus       245 ~~~i~~~~~~~~~~~~v~~~~---~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~i  321 (381)
T PLN02740        245 TDFINPKDSDKPVHERIREMT---GGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSI  321 (381)
T ss_pred             cEEEecccccchHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCeE
Confidence            998876543334666665543   238999999999988999999999996 99999997654333444332 3478999


Q ss_pred             EEeehh
Q 020768          306 SFLFHF  311 (321)
Q Consensus       306 ~g~~~~  311 (321)
                      .|++..
T Consensus       322 ~g~~~~  327 (381)
T PLN02740        322 TGSVFG  327 (381)
T ss_pred             EEEecC
Confidence            998653

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=2.2e-45  Score=341.78  Aligned_cols=285  Identities=32%  Similarity=0.470  Sum_probs=244.9

Q ss_pred             ceeEEEcc---------CCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEe
Q 020768           18 NMAAWLLG---------VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV   88 (321)
Q Consensus        18 ~~a~~~~~---------~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~v   88 (321)
                      |||+++.+         ++.++++++|.|.|+++||+|||.++++|++|++.+.|..+    ..+|.++|||++|+|+++
T Consensus         1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~----~~~p~i~GhE~~G~V~~v   76 (371)
T cd08281           1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP----RPLPMALGHEAAGVVVEV   76 (371)
T ss_pred             CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC----CCCCccCCccceeEEEEe
Confidence            78888874         35799999999999999999999999999999999887542    356899999999999999


Q ss_pred             CCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCcccccc--------------------CCCCCcceeEEEecCCc
Q 020768           89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT--------------------PPVHGSLANQVVHPADL  148 (321)
Q Consensus        89 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~G~~~~~~~v~~~~  148 (321)
                      |+++++|++||+|++.+..+|++|.+|+.+.+++|.+......                    ....|+|+||+.+++++
T Consensus        77 G~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~  156 (371)
T cd08281          77 GEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRS  156 (371)
T ss_pred             CCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccc
Confidence            9999999999999998888999999999999999987532110                    00137999999999999


Q ss_pred             EEECCCCCChhhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcC
Q 020768          149 CFKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG  226 (321)
Q Consensus       149 ~~~ip~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g  226 (321)
                      ++++|+++++++|+.++ +..+||+++ +.+.+++|++|||+|+|++|++++|+|+++|++.|++++.+++|+++++++|
T Consensus       157 ~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~G  236 (371)
T cd08281         157 VVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELG  236 (371)
T ss_pred             eEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcC
Confidence            99999999999988765 577888886 5688999999999999999999999999999977899999999999999999


Q ss_pred             CCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC--CccccchhhhccceE
Q 020768          227 ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL--EMTVPLTPAAARYLI  304 (321)
Q Consensus       227 ~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~k~~~  304 (321)
                      ++.++++.+  .++.+.++++.   ++++|++|||+|.+..+..++++++++|+++.+|...+  ..+++...++.|+++
T Consensus       237 a~~~i~~~~--~~~~~~i~~~~---~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~  311 (371)
T cd08281         237 ATATVNAGD--PNAVEQVRELT---GGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERT  311 (371)
T ss_pred             CceEeCCCc--hhHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCE
Confidence            998887543  45666665542   34899999999988899999999999999999997643  346777778999999


Q ss_pred             EEEeehh
Q 020768          305 YSFLFHF  311 (321)
Q Consensus       305 i~g~~~~  311 (321)
                      +.|++..
T Consensus       312 i~g~~~~  318 (371)
T cd08281         312 LKGSYMG  318 (371)
T ss_pred             EEEEecC
Confidence            9998864

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=1.2e-44  Score=335.29  Aligned_cols=286  Identities=29%  Similarity=0.453  Sum_probs=243.8

Q ss_pred             hceeEEEccCC-CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCC
Q 020768           17 VNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (321)
Q Consensus        17 ~~~a~~~~~~~-~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~   95 (321)
                      |||++++.+++ .++++|+|.|.|+++||+|||.++++|++|++.+.|...    ..+|+++|||++|+|+++|+++++|
T Consensus         1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~----~~~p~i~G~e~~G~V~~vG~~v~~~   76 (358)
T TIGR03451         1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN----DEFPFLLGHEAAGVVEAVGEGVTDV   76 (358)
T ss_pred             CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc----ccCCcccccceEEEEEEeCCCCccc
Confidence            69999998764 599999999999999999999999999999998887532    3468999999999999999999999


Q ss_pred             CCCCEEEEcCCccCCCCccccCCCCCCCCCcccc--------cc----CCCCCcceeEEEecCCcEEECCCCCChhhhcc
Q 020768           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--------AT----PPVHGSLANQVVHPADLCFKLPDNVSLEEGAM  163 (321)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~----~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~  163 (321)
                      ++||+|++.+...|++|.+|..++.++|.+....        +.    ...+|+|+||+.+++..++++|+++++++|++
T Consensus        77 ~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~  156 (358)
T TIGR03451        77 APGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGL  156 (358)
T ss_pred             CCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhhh
Confidence            9999999999899999999999999999753110        00    01369999999999999999999999998886


Q ss_pred             ch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHH
Q 020768          164 CE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA  241 (321)
Q Consensus       164 ~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~  241 (321)
                      +. .+.++|+++ +.+.+++|++|||+|+|++|++++|+|+++|+++|++++++++|.++++++|++.++++.+  .++.
T Consensus       157 l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~--~~~~  234 (358)
T TIGR03451       157 LGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSG--TDPV  234 (358)
T ss_pred             hcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCC--cCHH
Confidence            65 566778776 4578999999999999999999999999999977999999999999999999999887643  4555


Q ss_pred             HHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC--ccccchhhhccceEEEEeeh
Q 020768          242 EEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE--MTVPLTPAAARYLIYSFLFH  310 (321)
Q Consensus       242 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~k~~~i~g~~~  310 (321)
                      +.+.++.  .+.++|++|||+|++..+..++++++++|+++.+|.....  .+++...++.|++++.|++.
T Consensus       235 ~~i~~~~--~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~  303 (358)
T TIGR03451       235 EAIRALT--GGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWY  303 (358)
T ss_pred             HHHHHHh--CCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeec
Confidence            5555542  3567999999999878899999999999999999976443  45666678889999999863

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=1.4e-44  Score=336.79  Aligned_cols=287  Identities=23%  Similarity=0.369  Sum_probs=241.7

Q ss_pred             hhceeEEEccCC-CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768           16 EVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (321)
Q Consensus        16 ~~~~a~~~~~~~-~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~   94 (321)
                      ..||++++.++. .++++|+|.|.|+++||+|||.++++|++|++.+.+.      ..+|.++|||++|+|+++|+++++
T Consensus        11 ~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~------~~~p~i~GhE~~G~V~~vG~~v~~   84 (378)
T PLN02827         11 ITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQ------ALFPRIFGHEASGIVESIGEGVTE   84 (378)
T ss_pred             ceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCC------CCCCeeecccceEEEEEcCCCCcc
Confidence            459999988764 6999999999999999999999999999999987753      245889999999999999999999


Q ss_pred             CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccc----------------c----CCCCCcceeEEEecCCcEEECCC
Q 020768           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA----------------T----PPVHGSLANQVVHPADLCFKLPD  154 (321)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~----~~~~G~~~~~~~v~~~~~~~ip~  154 (321)
                      |++||+|++.+..+|++|.+|+.+.+++|.+.....                .    ...+|+|+||+.+++..++++|+
T Consensus        85 ~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~  164 (378)
T PLN02827         85 FEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDP  164 (378)
T ss_pred             cCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECCC
Confidence            999999999988899999999999999998753210                0    01248999999999999999999


Q ss_pred             CCChhhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEe
Q 020768          155 NVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVK  232 (321)
Q Consensus       155 ~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~  232 (321)
                      ++++++++.+. .+.++|+++ +.+++++|++|||+|+|++|++++|+|+++|++.|++++.+++|.++++++|++.+++
T Consensus       165 ~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~  244 (378)
T PLN02827        165 LAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFIN  244 (378)
T ss_pred             CCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEc
Confidence            99998888665 556777765 5578999999999999999999999999999977888888999999999999998887


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccC-CEEEEEcCCCCCccccc-hhhhccceEEEEeeh
Q 020768          233 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHLEMTVPL-TPAAARYLIYSFLFH  310 (321)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~k~~~i~g~~~  310 (321)
                      +.+...++.+.++++.   ++++|++||++|....+..+++.++++ |+++.+|.......++. ..++.|++++.|++.
T Consensus       245 ~~~~~~~~~~~v~~~~---~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~  321 (378)
T PLN02827        245 PNDLSEPIQQVIKRMT---GGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLF  321 (378)
T ss_pred             ccccchHHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeeec
Confidence            6543235555555542   348999999999877889999999998 99999997654444444 357889999999875


Q ss_pred             h
Q 020768          311 F  311 (321)
Q Consensus       311 ~  311 (321)
                      .
T Consensus       322 ~  322 (378)
T PLN02827        322 G  322 (378)
T ss_pred             C
Confidence            3

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=9e-45  Score=339.12  Aligned_cols=285  Identities=26%  Similarity=0.487  Sum_probs=231.9

Q ss_pred             hceeEEEccCCCeEEEEecCCCCC-------CCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeC
Q 020768           17 VNMAAWLLGVNTLKIQPFELPSLG-------PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG   89 (321)
Q Consensus        17 ~~~a~~~~~~~~l~~~e~~~p~~~-------~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG   89 (321)
                      -||++++.+++.++++|+|.|+|+       ++||||||.+++||++|++.+.|...    ..+|.++|||++|+|+++|
T Consensus         2 ~mka~v~~~~~~~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~----~~~p~i~GhE~~G~V~~vG   77 (393)
T TIGR02819         2 GNRGVVYLGPGKVEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT----APTGLVLGHEITGEVIEKG   77 (393)
T ss_pred             CceEEEEecCCceeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC----CCCCccccceeEEEEEEEc
Confidence            389999988889999999999874       68999999999999999999887432    3568999999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCcc------cccc---CCCCCcceeEEEecCC--cEEECCCCCCh
Q 020768           90 SEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK------FFAT---PPVHGSLANQVVHPAD--LCFKLPDNVSL  158 (321)
Q Consensus        90 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~---~~~~G~~~~~~~v~~~--~~~~ip~~~~~  158 (321)
                      ++|++|++||||.+.+..+|++|.+|+.+++++|.+..      +++.   ...+|+|+||+++++.  +++++|++++.
T Consensus        78 ~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~~~~  157 (393)
T TIGR02819        78 RDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRDQA  157 (393)
T ss_pred             CccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCCcccc
Confidence            99999999999999999999999999999999999753      1221   1257999999999964  79999998653


Q ss_pred             ----hh-hccchhhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEec
Q 020768          159 ----EE-GAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV  233 (321)
Q Consensus       159 ----~~-aa~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~  233 (321)
                          .. +++..++.++|++++..++++|++|||.|+|++|++++|+|+++|++.+++++.+++|.++++++|++. ++.
T Consensus       158 ~~~~~~~a~l~~~~~ta~~a~~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~-v~~  236 (393)
T TIGR02819       158 LEKIRDLTMLSDIFPTGYHGAVTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCET-VDL  236 (393)
T ss_pred             cccccceeeeccHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCCeE-Eec
Confidence                22 334558889999998888999999999888999999999999999977777778889999999999974 443


Q ss_pred             CCCcccHHHHHHHHHHHhCCCccEEEEcCCCH--------------HHHHHHHHHcccCCEEEEEcCCC-CC-c------
Q 020768          234 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGFN--------------KTMSTALSATRAGGKVCLVGMGH-LE-M------  291 (321)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~--------------~~~~~~~~~l~~~G~~v~~g~~~-~~-~------  291 (321)
                      .. ..++.+.+.++.  .+.++|++||++|.+              ..++.++++++++|+++++|... .. .      
T Consensus       237 ~~-~~~~~~~v~~~~--~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~  313 (393)
T TIGR02819       237 SK-DATLPEQIEQIL--GEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDAAA  313 (393)
T ss_pred             CC-cccHHHHHHHHc--CCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCcccccccccc
Confidence            22 234555555542  356799999999985              47999999999999999999753 21 1      


Q ss_pred             -----cccchhhhccceEEEEee
Q 020768          292 -----TVPLTPAAARYLIYSFLF  309 (321)
Q Consensus       292 -----~~~~~~~~~k~~~i~g~~  309 (321)
                           ++....++.|++++.|..
T Consensus       314 ~~~~~~i~~~~~~~~~~~i~g~~  336 (393)
T TIGR02819       314 KTGSLSIRFGLGWAKSHSFHTGQ  336 (393)
T ss_pred             cccccccchHHhhccCceEEecc
Confidence                 233444566777777653

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=7.4e-45  Score=330.40  Aligned_cols=263  Identities=33%  Similarity=0.419  Sum_probs=227.9

Q ss_pred             ceeEEEcc---CCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768           18 NMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (321)
Q Consensus        18 ~~a~~~~~---~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~   94 (321)
                      ||++++..   +..++++|+|.|.|+++||||||+|+++|+.|++.++|..  ....++|+++|.|++|+|+++|++|+.
T Consensus         1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~--~~~~~~P~i~G~d~aG~V~avG~~V~~   78 (326)
T COG0604           1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLA--PPVRPLPFIPGSEAAGVVVAVGSGVTG   78 (326)
T ss_pred             CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCC--CCCCCCCCcccceeEEEEEEeCCCCCC
Confidence            67888873   3459999999999999999999999999999999999862  222568999999999999999999999


Q ss_pred             CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHH
Q 020768           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (321)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~  173 (321)
                      |++||+|+.... .                        ..+|+|+||+.+|+++++++|+++++++||+++ .+.|||++
T Consensus        79 ~~~GdrV~~~~~-~------------------------~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~  133 (326)
T COG0604          79 FKVGDRVAALGG-V------------------------GRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLA  133 (326)
T ss_pred             cCCCCEEEEccC-C------------------------CCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHH
Confidence            999999987620 0                        046999999999999999999999999999776 78899999


Q ss_pred             HHH-cCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768          174 CRR-ANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       174 l~~-~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      +.. .++++|++|||+|+ |++|++++|+||++|+ .++++.+++++.++++++|++++++|.+  .++.+.++++.  .
T Consensus       134 l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~y~~--~~~~~~v~~~t--~  208 (326)
T COG0604         134 LFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVINYRE--EDFVEQVRELT--G  208 (326)
T ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEcCCc--ccHHHHHHHHc--C
Confidence            855 88999999999987 9999999999999998 5666667777777999999999999755  45888888764  3


Q ss_pred             CCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCC--CCccccchhhhccceEEEEeehhHH
Q 020768          252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH--LEMTVPLTPAAARYLIYSFLFHFFL  313 (321)
Q Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~k~~~i~g~~~~~~  313 (321)
                      +.++|+|+|++|+ .++..+++.|+++|+++.+|...  ...++++..++.+.++++|.+....
T Consensus       209 g~gvDvv~D~vG~-~~~~~~l~~l~~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~  271 (326)
T COG0604         209 GKGVDVVLDTVGG-DTFAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSR  271 (326)
T ss_pred             CCCceEEEECCCH-HHHHHHHHHhccCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceec
Confidence            6689999999997 68889999999999999999776  3566788889999999999988644

>PLN02702 L-idonate 5-dehydrogenase

Probab=100.00  E-value=6.2e-44  Score=331.26  Aligned_cols=310  Identities=85%  Similarity=1.348  Sum_probs=266.4

Q ss_pred             CCCCCCCCcccccchhhceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccc
Q 020768            1 MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE   80 (321)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e   80 (321)
                      |||++|++++-.-.++.|+++|+.+++.+++++.+.|.++++||+|||.++++|++|+..+.+...+.....+|.++|||
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e   80 (364)
T PLN02702          1 MGKGGMSSGEGSGVEEENMAAWLVGVNTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHE   80 (364)
T ss_pred             CCCCccccCCCcccccccceEEEecCCceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccc
Confidence            89999999999999999999999988999999999999999999999999999999999887632222123457899999


Q ss_pred             eeEEEEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhh
Q 020768           81 CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEE  160 (321)
Q Consensus        81 ~vG~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~  160 (321)
                      ++|+|+++|+++++|++||+|+..+..+|++|..|..+..++|++...++....+|+|++|+.++.+.++++|+++++.+
T Consensus        81 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~  160 (364)
T PLN02702         81 CAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEE  160 (364)
T ss_pred             eeEEEEEECCCCCCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHH
Confidence            99999999999999999999999999999999999999999999865444334579999999999999999999999999


Q ss_pred             hccchhhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccH
Q 020768          161 GAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI  240 (321)
Q Consensus       161 aa~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~  240 (321)
                      +++..++++++++++..++.+|++|+|+|+|++|++++|+|+++|+..+++++++++|.++++++|++.+++++....++
T Consensus       161 aa~~~~~~~a~~~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  240 (364)
T PLN02702        161 GAMCEPLSVGVHACRRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDV  240 (364)
T ss_pred             HhhhhHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccH
Confidence            88655677788888778899999999998899999999999999997788888899999999999999887765444566


Q ss_pred             HHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeeh
Q 020768          241 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFH  310 (321)
Q Consensus       241 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~  310 (321)
                      .+.+.++....+.++|++||++|++..+..++++++++|+++.+|.......++...+..+++++.+++.
T Consensus       241 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~  310 (364)
T PLN02702        241 ESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAAAREVDVVGVFR  310 (364)
T ss_pred             HHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCCcccHHHHHhCccEEEEecc
Confidence            6666555433356799999999977889999999999999999996544445566677889999999764

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=2.9e-44  Score=332.35  Aligned_cols=283  Identities=27%  Similarity=0.361  Sum_probs=230.2

Q ss_pred             ceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (321)
Q Consensus        18 ~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~   96 (321)
                      ||++++..+ ..++++++|.|+|+++||||||+++++|++|++.++|.+.......+|.++|||++|+|+++|++ +.|+
T Consensus         1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~   79 (355)
T cd08230           1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS   79 (355)
T ss_pred             CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence            688888743 24999999999999999999999999999999999886422111245889999999999999999 9999


Q ss_pred             CCCEEEEcCCccCCCCccccCCCCCCCCCcccc--ccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHHH
Q 020768           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHAC  174 (321)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l  174 (321)
                      +||+|+..+...|++|.+|..+++++|.+...+  +....+|+|+||++++++.++++|++++ +++++..++++++.++
T Consensus        80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~-~~a~~~~p~~~~~~a~  158 (355)
T cd08230          80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA-DVGVLLEPLSVVEKAI  158 (355)
T ss_pred             CCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC-cceeecchHHHHHHHH
Confidence            999999988889999999999999999875543  2223579999999999999999999999 5566666777666554


Q ss_pred             HH-------cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeC---ChhHHHHHHHcCCCeEEecCCCcccHHHHH
Q 020768          175 RR-------ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV---DDYRLSVAKELGADNIVKVSTNLQDIAEEV  244 (321)
Q Consensus       175 ~~-------~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~---~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~  244 (321)
                      ..       ..+++|++|+|+|+|++|++++|+||++|+ .++++++   +++|+++++++|++. +++.+  .++.+ .
T Consensus       159 ~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~--~~~~~-~  233 (355)
T cd08230         159 EQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEELGATY-VNSSK--TPVAE-V  233 (355)
T ss_pred             HHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEE-ecCCc--cchhh-h
Confidence            22       236789999999999999999999999999 5888876   688999999999986 44332  23322 1


Q ss_pred             HHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC--Ccccc----chhhhccceEEEEeehhH
Q 020768          245 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL--EMTVP----LTPAAARYLIYSFLFHFF  312 (321)
Q Consensus       245 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~----~~~~~~k~~~i~g~~~~~  312 (321)
                       +    ...++|+||||+|.+..+..+++.++++|+++++|...+  ..+++    ...++.|++++.|+....
T Consensus       234 -~----~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~  302 (355)
T cd08230         234 -K----LVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNAN  302 (355)
T ss_pred             -h----hcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCc
Confidence             1    135799999999987789999999999999999997655  34455    356788999999987543

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=6.1e-44  Score=331.89  Aligned_cols=287  Identities=25%  Similarity=0.410  Sum_probs=241.4

Q ss_pred             hceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCC
Q 020768           17 VNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (321)
Q Consensus        17 ~~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~   95 (321)
                      +|||+++..+ +.++++++|.|+|+++||+|||.++++|++|++.+.|...   ...+|.++|||++|+|+++|+++++|
T Consensus         2 ~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~~v~~~   78 (369)
T cd08301           2 TCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQ---TPLFPRILGHEAAGIVESVGEGVTDL   78 (369)
T ss_pred             ccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCC---CCCCCcccccccceEEEEeCCCCCcc
Confidence            7999998754 5799999999999999999999999999999998887542   14568999999999999999999999


Q ss_pred             CCCCEEEEcCCccCCCCccccCCCCCCCCCcccc---cc------------------CCCCCcceeEEEecCCcEEECCC
Q 020768           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT------------------PPVHGSLANQVVHPADLCFKLPD  154 (321)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------------------~~~~G~~~~~~~v~~~~~~~ip~  154 (321)
                      ++||+|++.+..+|++|.+|..+.++.|.+....   +.                  ....|+|+||+.+++.+++++|+
T Consensus        79 ~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~  158 (369)
T cd08301          79 KPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINP  158 (369)
T ss_pred             ccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCC
Confidence            9999999999999999999999999999886432   00                  01348999999999999999999


Q ss_pred             CCChhhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEe
Q 020768          155 NVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVK  232 (321)
Q Consensus       155 ~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~  232 (321)
                      ++++++++++. .+.++|+++ +..++++|++|||+|+|++|++++|+|+++|+.+|++++++++|.++++++|++.+++
T Consensus       159 ~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~  238 (369)
T cd08301         159 EAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVN  238 (369)
T ss_pred             CCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEc
Confidence            99999988665 567888776 5588999999999999999999999999999867899999999999999999998887


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccC-CEEEEEcCCCCC--ccccchhhhccceEEEEee
Q 020768          233 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHLE--MTVPLTPAAARYLIYSFLF  309 (321)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~k~~~i~g~~  309 (321)
                      +.+...++.+.++++.   ++++|++||++|.+..+..++++++++ |+++++|....+  .+++...+ .+++++.|++
T Consensus       239 ~~~~~~~~~~~v~~~~---~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~  314 (369)
T cd08301         239 PKDHDKPVQEVIAEMT---GGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNL-LNGRTLKGTL  314 (369)
T ss_pred             ccccchhHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHH-hcCCeEEEEe
Confidence            6542234555555542   348999999999888889999999996 999999976543  33443334 4799999986


Q ss_pred             h
Q 020768          310 H  310 (321)
Q Consensus       310 ~  310 (321)
                      .
T Consensus       315 ~  315 (369)
T cd08301         315 F  315 (369)
T ss_pred             c
Confidence            5

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=1e-43  Score=330.16  Aligned_cols=286  Identities=27%  Similarity=0.406  Sum_probs=237.3

Q ss_pred             ceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (321)
Q Consensus        18 ~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~   96 (321)
                      ||++++..+ +.++++++|.|+|+++||+|||.++++|++|++.+.|.++.   ..+|.++|||++|+|+++|+++++|+
T Consensus         2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~---~~~p~i~GhE~~G~V~~vG~~v~~~~   78 (368)
T TIGR02818         2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPE---GVFPVILGHEGAGIVEAVGEGVTSVK   78 (368)
T ss_pred             ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCC---CCCCeeeccccEEEEEEECCCCccCC
Confidence            788887754 57999999999999999999999999999999988875421   35689999999999999999999999


Q ss_pred             CCCEEEEcCCccCCCCccccCCCCCCCCCcccc---cc-----------------CCCCCcceeEEEecCCcEEECCCCC
Q 020768           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT-----------------PPVHGSLANQVVHPADLCFKLPDNV  156 (321)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------------~~~~G~~~~~~~v~~~~~~~ip~~~  156 (321)
                      +||+|.+.+..+|++|++|+.+.+++|.+....   +.                 ...+|+|+||+.+++++++++|+++
T Consensus        79 ~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l  158 (368)
T TIGR02818        79 VGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAA  158 (368)
T ss_pred             CCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCC
Confidence            999999998889999999999999999874310   00                 0124799999999999999999999


Q ss_pred             Chhhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecC
Q 020768          157 SLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS  234 (321)
Q Consensus       157 ~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~  234 (321)
                      ++++++.++ ++.++|+++ +.+.+++|++|||+|+|++|++++|+|+++|+++|++++.+++|+++++++|++.++++.
T Consensus       159 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~  238 (368)
T TIGR02818       159 PLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPN  238 (368)
T ss_pred             CHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEccc
Confidence            999988765 778899987 568899999999999999999999999999997799999999999999999999988765


Q ss_pred             CCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccC-CEEEEEcCCCCC--ccccchhhhccceEEEEeeh
Q 020768          235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHLE--MTVPLTPAAARYLIYSFLFH  310 (321)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~k~~~i~g~~~  310 (321)
                      +...++.+.++++.   ++++|++|||+|++..+..++++++++ |+++.+|.....  .+++...++ ++..+.|+..
T Consensus       239 ~~~~~~~~~v~~~~---~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~  313 (368)
T TIGR02818       239 DYDKPIQEVIVEIT---DGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLV-TGRVWRGSAF  313 (368)
T ss_pred             ccchhHHHHHHHHh---CCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHh-ccceEEEeec
Confidence            43344555555543   348999999999888899999999886 999999976432  333333344 3445777653

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-43  Score=326.71  Aligned_cols=284  Identities=30%  Similarity=0.493  Sum_probs=241.9

Q ss_pred             ceeEEEccCCCeEEEEecCCCC-CCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768           18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (321)
Q Consensus        18 ~~a~~~~~~~~l~~~e~~~p~~-~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~   96 (321)
                      ||++++.+++.++++|+|.|.| +++||+|||.++++|++|+..+.... .   ..+|.++|||++|+|+++|+++++|+
T Consensus         1 Mka~~~~~~~~~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~-~---~~~p~i~G~e~~G~V~~vG~~v~~~~   76 (347)
T PRK10309          1 MKSVVNDTDGIVRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG-A---HYYPITLGHEFSGYVEAVGSGVDDLH   76 (347)
T ss_pred             CceEEEeCCCceEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC-C---CCCCcccccceEEEEEEeCCCCCCCC
Confidence            7899998888899999999998 59999999999999999987543211 0   23588999999999999999999999


Q ss_pred             CCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHHHHH
Q 020768           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRR  176 (321)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~  176 (321)
                      +||+|++.+..+|++|++|..+.+++|.+....+. ..+|+|+||+.++++.++++|+++++++|++++++++++++++.
T Consensus        77 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~~~~~~~~~~~~  155 (347)
T PRK10309         77 PGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGS-RRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIEPITVGLHAFHL  155 (347)
T ss_pred             CCCEEEECCCcCCCCCcchhCcCcccCCCcceecc-CCCCccceeEEeehHHeEECcCCCCHHHhhhhhHHHHHHHHHHh
Confidence            99999999999999999999999999988665543 46899999999999999999999999999887677778888877


Q ss_pred             cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      ..+++|++|||+|+|++|++++|+|+++|++.+++++++++|.++++++|++.+++.++.  + .+.+.++.  .+.++|
T Consensus       156 ~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~--~-~~~~~~~~--~~~~~d  230 (347)
T PRK10309        156 AQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREM--S-APQIQSVL--RELRFD  230 (347)
T ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCccc--C-HHHHHHHh--cCCCCC
Confidence            888999999999999999999999999999768889999999999999999988875432  2 23343332  245788


Q ss_pred             -EEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCcccc---chhhhccceEEEEeehh
Q 020768          257 -VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVP---LTPAAARYLIYSFLFHF  311 (321)
Q Consensus       257 -~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~---~~~~~~k~~~i~g~~~~  311 (321)
                       ++|||+|+..++..++++++++|+++++|......+++   +..+++|++++.|++.+
T Consensus       231 ~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~  289 (347)
T PRK10309        231 QLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMN  289 (347)
T ss_pred             eEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhhcCcEEEEEecc
Confidence             99999999889999999999999999999765443333   34578899999998753

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=1e-43  Score=329.01  Aligned_cols=287  Identities=22%  Similarity=0.337  Sum_probs=234.6

Q ss_pred             chhhceeEEEcc-CCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCC
Q 020768           14 GEEVNMAAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (321)
Q Consensus        14 ~~~~~~a~~~~~-~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v   92 (321)
                      -|+++++++..+ .+.+++.+++.|.|+++||+|||.++++|++|++.+.|.+..   ..+|.++|||++|+|+++|++|
T Consensus         9 ~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~---~~~p~i~GhE~~G~V~~vG~~v   85 (360)
T PLN02586          9 HPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGF---TRYPIVPGHEIVGIVTKLGKNV   85 (360)
T ss_pred             chhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCC---CCCCccCCcceeEEEEEECCCC
Confidence            344466666654 467999999999999999999999999999999988765321   3568999999999999999999


Q ss_pred             CCCCCCCEEEEcCC-ccCCCCccccCCCCCCCCCccccc------cCCCCCcceeEEEecCCcEEECCCCCChhhhccch
Q 020768           93 KTLVPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE  165 (321)
Q Consensus        93 ~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~  165 (321)
                      ++|++||+|++.+. .+|++|.+|+.+.+++|++..+..      +...+|+|+||++++++.++++|+++++++|+.+.
T Consensus        86 ~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~  165 (360)
T PLN02586         86 KKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLL  165 (360)
T ss_pred             CccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhhh
Confidence            99999999987654 479999999999999999765431      12347999999999999999999999999988665


Q ss_pred             -hhHHHHHHHHH-cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChh-HHHHHHHcCCCeEEecCCCcccHHH
Q 020768          166 -PLSVGLHACRR-ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDY-RLSVAKELGADNIVKVSTNLQDIAE  242 (321)
Q Consensus       166 -~~~~a~~~l~~-~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~-~~~~~~~~g~~~vi~~~~~~~~~~~  242 (321)
                       .+.++|+++.. ..+++|++|||.|+|++|++++|+||++|++ +++++.+++ +.+.++++|++.+++..+.     +
T Consensus       166 ~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~-vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~-----~  239 (360)
T PLN02586        166 CAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLK-VTVISSSSNKEDEAINRLGADSFLVSTDP-----E  239 (360)
T ss_pred             cchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeCCcchhhhHHHhCCCcEEEcCCCH-----H
Confidence             56678888865 5578999999999999999999999999994 666655554 4567789999988874321     2


Q ss_pred             HHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehhHH
Q 020768          243 EVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFL  313 (321)
Q Consensus       243 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~  313 (321)
                      .+++.   . +++|++||++|+...++.++++++++|+++.+|......++++..++.+++++.|+..+..
T Consensus       240 ~~~~~---~-~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~  306 (360)
T PLN02586        240 KMKAA---I-GTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKLVGGSDIGGI  306 (360)
T ss_pred             HHHhh---c-CCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCHHHHHhCCeEEEEcCcCCH
Confidence            23332   1 3699999999987789999999999999999997655667888888889999999876443

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=4.9e-43  Score=325.69  Aligned_cols=287  Identities=25%  Similarity=0.423  Sum_probs=238.4

Q ss_pred             hceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCC
Q 020768           17 VNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (321)
Q Consensus        17 ~~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~   95 (321)
                      +||++++... +.++++++|.|.|+++||+|||.++++|++|++.+.|.++.   ..+|.++|||++|+|+++|+++++|
T Consensus         2 ~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~---~~~p~v~G~E~~G~V~~vG~~v~~~   78 (368)
T cd08300           2 TCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPE---GLFPVILGHEGAGIVESVGEGVTSV   78 (368)
T ss_pred             cceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCcc---CCCCceeccceeEEEEEeCCCCccC
Confidence            6899987644 67999999999999999999999999999999988875432   3578999999999999999999999


Q ss_pred             CCCCEEEEcCCccCCCCccccCCCCCCCCCcccc---cc-----------------CCCCCcceeEEEecCCcEEECCCC
Q 020768           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT-----------------PPVHGSLANQVVHPADLCFKLPDN  155 (321)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------------~~~~G~~~~~~~v~~~~~~~ip~~  155 (321)
                      ++||+|++.+..+|++|++|+.+++++|++....   +.                 ....|+|+||+.++++.++++|++
T Consensus        79 ~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~  158 (368)
T cd08300          79 KPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPE  158 (368)
T ss_pred             CCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCC
Confidence            9999999988889999999999999999875311   00                 012479999999999999999999


Q ss_pred             CChhhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEec
Q 020768          156 VSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV  233 (321)
Q Consensus       156 ~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~  233 (321)
                      +++++++.+. ++.++|+++ +.+.+++|++|||+|+|++|++++|+|+++|+.+|++++++++|.++++++|++.++++
T Consensus       159 l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~  238 (368)
T cd08300         159 APLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNP  238 (368)
T ss_pred             CChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcc
Confidence            9999988765 678899886 55889999999999999999999999999999779999999999999999999999886


Q ss_pred             CCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccC-CEEEEEcCCCC--CccccchhhhccceEEEEeeh
Q 020768          234 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHL--EMTVPLTPAAARYLIYSFLFH  310 (321)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~k~~~i~g~~~  310 (321)
                      .+.++++.+.+.++.   ++++|++||++|+...+..++++++++ |+++.+|....  ...++...+. ++.++.|+..
T Consensus       239 ~~~~~~~~~~v~~~~---~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~  314 (368)
T cd08300         239 KDHDKPIQQVLVEMT---DGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV-TGRVWKGTAF  314 (368)
T ss_pred             cccchHHHHHHHHHh---CCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh-hcCeEEEEEe
Confidence            543335666665543   348999999999877899999999886 99999997643  2233333343 3456777653

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=5.8e-43  Score=323.15  Aligned_cols=290  Identities=37%  Similarity=0.597  Sum_probs=251.0

Q ss_pred             ceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhcccc-CC-------cCCCCCcccccceeEEEEEeC
Q 020768           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRC-AD-------FVVKEPMVIGHECAGVIEKVG   89 (321)
Q Consensus        18 ~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~-~~-------~~~~~p~~~G~e~vG~V~~vG   89 (321)
                      ||++++.+++.++++++|.|.|+++||+||+.++++|++|+..+.+... ..       ....+|.++|||++|+|+++|
T Consensus         1 mka~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   80 (351)
T cd08233           1 MKAARYHGRKDIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEVG   80 (351)
T ss_pred             CceEEEecCCceEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEeC
Confidence            7899998888999999999999999999999999999999887653211 00       012368999999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHH
Q 020768           90 SEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV  169 (321)
Q Consensus        90 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~  169 (321)
                      ++++.|++||+|+..+..+|++|.+|+.+..++|.+..+.+....+|+|++|+.++.+.++++|+++++.+++++.++.+
T Consensus        81 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~~~~~t  160 (351)
T cd08233          81 SGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALVEPLAV  160 (351)
T ss_pred             CCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhccHHHH
Confidence            99999999999999988899999999999999999876544323479999999999999999999999999887778889


Q ss_pred             HHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHH
Q 020768          170 GLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       170 a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      ||++++..++++|++|+|+|+|++|++++|+|+.+|++.++++++++++.++++++|++.++++.+  .++.+.++++. 
T Consensus       161 a~~~l~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~--~~~~~~l~~~~-  237 (351)
T cd08233         161 AWHAVRRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTE--VDVVAEVRKLT-  237 (351)
T ss_pred             HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCc--cCHHHHHHHHh-
Confidence            999997788999999999999999999999999999977888889999999999999999887543  45666665542 


Q ss_pred             HhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehh
Q 020768          250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF  311 (321)
Q Consensus       250 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~  311 (321)
                       .+.++|++||++|+...++.++++|+++|+++.+|......+++...++.|+++|.|+..+
T Consensus       238 -~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~  298 (351)
T cd08233         238 -GGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGSICY  298 (351)
T ss_pred             -CCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCCCccCHHHHHhhCcEEEEEecc
Confidence             3457999999999877899999999999999999977656677887888999999998754

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=2.2e-43  Score=324.64  Aligned_cols=276  Identities=23%  Similarity=0.306  Sum_probs=226.9

Q ss_pred             hceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCc-CCCCCcccccceeEEEEEeCCCCCCC
Q 020768           17 VNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF-VVKEPMVIGHECAGVIEKVGSEVKTL   95 (321)
Q Consensus        17 ~~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~-~~~~p~~~G~e~vG~V~~vG~~v~~~   95 (321)
                      ..+++++++++.++++|+|.|. +++||||||.++|||++|++.++|.+.... ...+|.++|||++|+|+++|.+  .|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~~   78 (341)
T cd08237           2 INQVYRLVRPKFFEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--TY   78 (341)
T ss_pred             cccceEEeccceEEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--cc
Confidence            4678888899999999999994 999999999999999999999988642211 1357999999999999998764  79


Q ss_pred             CCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHHHH
Q 020768           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACR  175 (321)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~  175 (321)
                      ++||+|++.+..+|+ |+.|.  ..++|.+..+.+. ..+|+|+||+++|+++++++|+++++++|++++++++++++++
T Consensus        79 ~vGdrV~~~~~~~~~-~~~~~--~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~~~~~~a~~a~~  154 (341)
T cd08237          79 KVGTKVVMVPNTPVE-KDEII--PENYLPSSRFRSS-GYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFTELVSVGVHAIS  154 (341)
T ss_pred             CCCCEEEECCCCCch-hcccc--hhccCCCcceeEe-cCCCceEEEEEEchHHeEECCCCCChHHhhhhchHHHHHHHHH
Confidence            999999998887787 44553  4577877665443 3579999999999999999999999999988889999999885


Q ss_pred             H---cCCCCCCEEEEEcCChhHHHHHHHHHH-cCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768          176 R---ANIGPETNVLIMGAGPIGLVTMLGARA-FGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       176 ~---~~~~~g~~vlI~Gag~vG~~a~qla~~-~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      .   +.+++|++|||+|+|++|++++|+|++ +|..+|++++.+++|++++++++.+..++      +       +.+  
T Consensus       155 ~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~------~-------~~~--  219 (341)
T cd08237         155 RFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLID------D-------IPE--  219 (341)
T ss_pred             HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehh------h-------hhh--
Confidence            3   457899999999999999999999996 66657889999999999998866543221      1       111  


Q ss_pred             CCCccEEEEcCC---CHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehhHHH
Q 020768          252 GTGIDVSFDCAG---FNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFLI  314 (321)
Q Consensus       252 ~~~~d~vid~~g---~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~  314 (321)
                      ..++|+|||++|   .+..+..++++++++|+++++|....+.+++...++.|++++.|+..+...
T Consensus       220 ~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~  285 (341)
T cd08237         220 DLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTRMVLEKGLTLVGSSRSTRE  285 (341)
T ss_pred             ccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHHHHhhCceEEEEecccCHH
Confidence            236999999999   456889999999999999999976555677877889999999998765433

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=6.5e-43  Score=322.62  Aligned_cols=284  Identities=24%  Similarity=0.400  Sum_probs=239.6

Q ss_pred             EEEccCCC-eEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 020768           21 AWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGD   99 (321)
Q Consensus        21 ~~~~~~~~-l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd   99 (321)
                      .++.+++. ++++++|.|.|+++||+|||.++++|++|++.+.+....  ...+|.++|||++|+|+++|++++.+ +||
T Consensus         2 ~~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~--~~~~p~i~GhE~~G~V~~vG~~v~~~-~Gd   78 (349)
T TIGR03201         2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRT--NHALPLALGHEISGRVIQAGAGAASW-IGK   78 (349)
T ss_pred             ceEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCc--cCCCCeeccccceEEEEEeCCCcCCC-CCC
Confidence            34555554 899999999999999999999999999999887443211  13568999999999999999999887 999


Q ss_pred             EEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCC------CCChhhhccc-hhhHHHHH
Q 020768          100 RVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD------NVSLEEGAMC-EPLSVGLH  172 (321)
Q Consensus       100 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~------~~~~~~aa~~-~~~~~a~~  172 (321)
                      +|++.+..+|++|.+|+.+++++|.+....+. ..+|+|+||+.++.+.++++|+      ++++++++.+ .++.++|+
T Consensus        79 rV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~-~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~  157 (349)
T TIGR03201        79 AVIVPAVIPCGECELCKTGRGTICRAQKMPGN-DMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQ  157 (349)
T ss_pred             EEEECCCCCCCCChhhhCcCcccCCCCCccCc-CCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHH
Confidence            99999999999999999999999988765543 3579999999999999999999      8888887755 57888999


Q ss_pred             HHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCc-ccHHHHHHHHHHHh
Q 020768          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL-QDIAEEVEKIQKAM  251 (321)
Q Consensus       173 ~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~-~~~~~~~~~~~~~~  251 (321)
                      +++...+++|++|+|+|+|++|++++|+|+++|+ .+++++++++|.++++++|++.+++..+.+ .++.+.++++.  .
T Consensus       158 a~~~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t--~  234 (349)
T TIGR03201       158 AAVQAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFA--K  234 (349)
T ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhc--c
Confidence            9888889999999999999999999999999999 688899999999999999999888754322 23444444442  3


Q ss_pred             CCCcc----EEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehh
Q 020768          252 GTGID----VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF  311 (321)
Q Consensus       252 ~~~~d----~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~  311 (321)
                      +.++|    ++|||+|+...++.++++++++|+++++|......++++..++.+++++.|++.+
T Consensus       235 ~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~g~~~~  298 (349)
T TIGR03201       235 ARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLMAFHARALGNWGC  298 (349)
T ss_pred             cCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCcccCHHHHhhcccEEEEEecC
Confidence            45676    8999999988888999999999999999987655677777888889999998753

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=1.1e-42  Score=323.49  Aligned_cols=278  Identities=21%  Similarity=0.344  Sum_probs=230.5

Q ss_pred             CCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcC
Q 020768           26 VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEP  105 (321)
Q Consensus        26 ~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~  105 (321)
                      ++.+++.+++.|.|+++||+|||.++++|++|++.+.|.+..   ..+|.++|||++|+|+++|+++++|++||+|++.+
T Consensus        16 ~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~---~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV~~~~   92 (375)
T PLN02178         16 SGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGF---SRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGV   92 (375)
T ss_pred             CCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCC---CCCCcccCceeeEEEEEECCCCCccCCCCEEEEcC
Confidence            467889999999999999999999999999999998875421   24689999999999999999999999999998766


Q ss_pred             Cc-cCCCCccccCCCCCCCCCccccc------cCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHHHHHc
Q 020768          106 GI-SCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACRRA  177 (321)
Q Consensus       106 ~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l~~~  177 (321)
                      .. +|++|.+|+.+++++|++..+..      +...+|+|+||+.+++++++++|+++++++|+.+. ...++|+++...
T Consensus        93 ~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~  172 (375)
T PLN02178         93 IIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYY  172 (375)
T ss_pred             ccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchHHHHHHHHh
Confidence            54 69999999999999999865321      12347999999999999999999999999988665 556788888654


Q ss_pred             C--CCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh-hHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCC
Q 020768          178 N--IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-YRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       178 ~--~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~  254 (321)
                      .  .++|++|+|.|+|++|++++|+|+++|+ .+++++.++ ++.++++++|++.++++.+  .   +.+.+.   . .+
T Consensus       173 ~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~--~---~~v~~~---~-~~  242 (375)
T PLN02178        173 GMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFLVTTD--S---QKMKEA---V-GT  242 (375)
T ss_pred             CCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEEcCcC--H---HHHHHh---h-CC
Confidence            3  3689999999999999999999999999 577776664 4578889999998887532  1   233332   2 36


Q ss_pred             ccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehhHHHhh
Q 020768          255 IDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFLIVL  316 (321)
Q Consensus       255 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~  316 (321)
                      +|++|||+|.+..+..++++++++|+++.+|....+.++++..+++|+++++|+..+....+
T Consensus       243 ~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~  304 (375)
T PLN02178        243 MDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGSQIGGMKET  304 (375)
T ss_pred             CcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCHHHHHhCCeEEEEeCccCHHHH
Confidence            99999999987788999999999999999997655567888888999999999987554433

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=1.9e-42  Score=321.31  Aligned_cols=287  Identities=27%  Similarity=0.457  Sum_probs=242.5

Q ss_pred             hceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCC
Q 020768           17 VNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (321)
Q Consensus        17 ~~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~   95 (321)
                      +||++++.+. +.++++++|.|.++++||+|||.++++|++|++.+.|...    ..+|.++|||++|+|+++|++++++
T Consensus         2 ~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~----~~~p~i~G~e~~G~V~~vG~~v~~~   77 (365)
T cd08277           2 KCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA----TLFPVILGHEGAGIVESVGEGVTNL   77 (365)
T ss_pred             ccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC----CCCCeecccceeEEEEeeCCCCccC
Confidence            5899988754 5699999999999999999999999999999999887542    3568999999999999999999999


Q ss_pred             CCCCEEEEcCCccCCCCccccCCCCCCCCCcccccc-------------------CCCCCcceeEEEecCCcEEECCCCC
Q 020768           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT-------------------PPVHGSLANQVVHPADLCFKLPDNV  156 (321)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~G~~~~~~~v~~~~~~~ip~~~  156 (321)
                      ++||+|++.+..+|++|.+|..+.+++|++....+.                   ....|+|+||+.++.++++++|+++
T Consensus        78 ~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l  157 (365)
T cd08277          78 KPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAA  157 (365)
T ss_pred             CCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCC
Confidence            999999998888999999999999999987543210                   0125899999999999999999999


Q ss_pred             Chhhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecC
Q 020768          157 SLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS  234 (321)
Q Consensus       157 ~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~  234 (321)
                      ++++++.+. ++.++|+++ +.+.+++|++|||+|+|++|++++|+|+++|+.+|++++++++|+++++++|++.+++..
T Consensus       158 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~  237 (365)
T cd08277         158 PLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPK  237 (365)
T ss_pred             CHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccc
Confidence            999988765 778899886 568899999999999899999999999999997789999999999999999999888755


Q ss_pred             CCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccC-CEEEEEcCCCC-CccccchhhhccceEEEEeehh
Q 020768          235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHL-EMTVPLTPAAARYLIYSFLFHF  311 (321)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~  311 (321)
                      +...++.+.++++.   +.++|++|||+|.+..+..++++++++ |+++.+|...+ ..+++...++. ++++.|++.+
T Consensus       238 ~~~~~~~~~~~~~~---~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~i~g~~~~  312 (365)
T cd08277         238 DSDKPVSEVIREMT---GGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GRTWKGSFFG  312 (365)
T ss_pred             cccchHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CCEEEeeecC
Confidence            43334455555442   358999999999878889999999885 99999997643 34566656664 8999998764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=6.6e-42  Score=313.31  Aligned_cols=267  Identities=23%  Similarity=0.289  Sum_probs=231.5

Q ss_pred             CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCC
Q 020768           27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPG  106 (321)
Q Consensus        27 ~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~~  106 (321)
                      ..++++++|.|.|+++||+|||.++++|++|++.+.|.++.   ..+|.++|||++|+|+++|+++++|++||+|++.+.
T Consensus        13 ~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~   89 (329)
T TIGR02822        13 GPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPV---HRPRVTPGHEVVGEVAGRGADAGGFAVGDRVGIAWL   89 (329)
T ss_pred             CCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCC---CCCCccCCcceEEEEEEECCCCcccCCCCEEEEcCc
Confidence            46899999999999999999999999999999998875421   234789999999999999999999999999988764


Q ss_pred             -ccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHHHHHHcCCCCCCE
Q 020768          107 -ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHACRRANIGPETN  184 (321)
Q Consensus       107 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~~l~~~~~~~g~~  184 (321)
                       .+|+.|.+|+.+.+++|++..+.+. ..+|+|+||+.+++++++++|+++++.+++.+ .++.+||++++.+++++|++
T Consensus        90 ~~~c~~c~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~g~~  168 (329)
T TIGR02822        90 RRTCGVCRYCRRGAENLCPASRYTGW-DTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLRASLPPGGR  168 (329)
T ss_pred             cCcCCCChHHhCcCcccCCCcccCCc-ccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHHhcCCCCCCE
Confidence             3799999999999999998776543 45799999999999999999999999988754 47788999998889999999


Q ss_pred             EEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCC
Q 020768          185 VLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGF  264 (321)
Q Consensus       185 vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  264 (321)
                      |||+|+|++|++++|+|+.+|+ ++++++++++|.++++++|++++++..+..              ..++|+++++.+.
T Consensus       169 VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~--------------~~~~d~~i~~~~~  233 (329)
T TIGR02822       169 LGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAYDTP--------------PEPLDAAILFAPA  233 (329)
T ss_pred             EEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceeccccccC--------------cccceEEEECCCc
Confidence            9999999999999999999999 588899999999999999999988642110              2368999999888


Q ss_pred             HHHHHHHHHHcccCCEEEEEcCCCC-CccccchhhhccceEEEEeehhH
Q 020768          265 NKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARYLIYSFLFHFF  312 (321)
Q Consensus       265 ~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~~  312 (321)
                      ...+..++++++++|+++++|.... ..+++...++.|++++.|++...
T Consensus       234 ~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~  282 (329)
T TIGR02822       234 GGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNT  282 (329)
T ss_pred             HHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCC
Confidence            8899999999999999999997533 34577777888999999987643

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=1.1e-40  Score=308.61  Aligned_cols=286  Identities=22%  Similarity=0.311  Sum_probs=235.0

Q ss_pred             hhhceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCC
Q 020768           15 EEVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (321)
Q Consensus        15 ~~~~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~   93 (321)
                      ++.+++++..++ +.+.+++++.|.|+++||+|||.++++|++|++.+.|.+..   ..+|.++|||++|+|+++|++++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~---~~~p~i~G~E~~G~Vv~vG~~v~   83 (357)
T PLN02514          7 EKKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGM---SNYPMVPGHEVVGEVVEVGSDVS   83 (357)
T ss_pred             CceEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCc---CCCCccCCceeeEEEEEECCCcc
Confidence            344888888866 57999999999999999999999999999999988775421   24688999999999999999999


Q ss_pred             CCCCCCEEEEcCCc-cCCCCccccCCCCCCCCCccccc------cCCCCCcceeEEEecCCcEEECCCCCChhhhccch-
Q 020768           94 TLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-  165 (321)
Q Consensus        94 ~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-  165 (321)
                      +|++||+|++.+.. +|++|.+|+.+.+++|.+..+..      +...+|+|+||+.++...++++|+++++++|+.+. 
T Consensus        84 ~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~  163 (357)
T PLN02514         84 KFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLC  163 (357)
T ss_pred             cccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhh
Confidence            99999999876544 79999999999999998763211      12247999999999999999999999999988654 


Q ss_pred             hhHHHHHHHHH-cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHH-HHHHcCCCeEEecCCCcccHHHH
Q 020768          166 PLSVGLHACRR-ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEE  243 (321)
Q Consensus       166 ~~~~a~~~l~~-~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~  243 (321)
                      .+.++|+++.. ...++|++++|+|+|++|++++|+||++|+ .+++++.++++.+ .++++|++.+++..+.     +.
T Consensus       164 ~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~-----~~  237 (357)
T PLN02514        164 AGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHLGADDYLVSSDA-----AE  237 (357)
T ss_pred             hHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhcCCcEEecCCCh-----HH
Confidence            66788988865 455799999999889999999999999999 4666767766654 4567999877654321     22


Q ss_pred             HHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehhHH
Q 020768          244 VEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFL  313 (321)
Q Consensus       244 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~  313 (321)
                      +.+.    ..++|++||++|....++.++++++++|+++.+|......+++...++.|++++.|++....
T Consensus       238 ~~~~----~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~  303 (357)
T PLN02514        238 MQEA----ADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKVITGSFIGSM  303 (357)
T ss_pred             HHHh----cCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCcccHHHHhhCCcEEEEEecCCH
Confidence            3332    24799999999987789999999999999999997755567788888899999999976544

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=2.2e-40  Score=304.40  Aligned_cols=282  Identities=27%  Similarity=0.441  Sum_probs=241.7

Q ss_pred             ceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCC
Q 020768           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (321)
Q Consensus        18 ~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~   97 (321)
                      ||++++.+++.++++++|.|.|+++|++||+.++++|++|+..+.|..+.   .++|.++|||++|+|+++|++++.+++
T Consensus         1 m~a~~~~~~~~~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~~~~~   77 (339)
T PRK10083          1 MKSIVIEKPNSLAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPF---AKYPRVIGHEFFGVIDAVGEGVDAARI   77 (339)
T ss_pred             CeEEEEecCCeeEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCc---CCCCcccccceEEEEEEECCCCccCCC
Confidence            78999988889999999999999999999999999999999988775421   246899999999999999999999999


Q ss_pred             CCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHHHHHc
Q 020768           98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA  177 (321)
Q Consensus        98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~~  177 (321)
                      ||+|++.+..+|+.|.+|..+++++|.++.+.+. ..+|+|++|+.++..+++++|+++++.+++...++.+++++.+..
T Consensus        78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~~~~~~~~a~~~~~~~  156 (339)
T PRK10083         78 GERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGV-HRDGGFSEYAVVPAKNAHRIPDAIADQYAVMVEPFTIAANVTGRT  156 (339)
T ss_pred             CCEEEEccccCCCCCccccCcCcccCCCCceEEE-ccCCcceeeEEechHHeEECcCCCCHHHHhhhchHHHHHHHHHhc
Confidence            9999999999999999999999999998776443 347999999999999999999999998887666788888767778


Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHH-cCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARA-FGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~-~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      ++++|++|+|+|+|++|++++|+|+. +|+..+++++++++|.++++++|++.++++.+  .++.+.+..    .+.++|
T Consensus       157 ~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~--~~~~~~~~~----~g~~~d  230 (339)
T PRK10083        157 GPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ--EPLGEALEE----KGIKPT  230 (339)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc--ccHHHHHhc----CCCCCC
Confidence            99999999999999999999999996 69977888999999999999999998887543  344443321    134567


Q ss_pred             EEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEee
Q 020768          257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLF  309 (321)
Q Consensus       257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~  309 (321)
                      ++||++|.+..+..++++++++|+++.+|.......++...+..+++++.+..
T Consensus       231 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  283 (339)
T PRK10083        231 LIIDAACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELSIFSSR  283 (339)
T ss_pred             EEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCceecHHHHhhcceEEEEEe
Confidence            99999998778999999999999999999765444455555667888888864

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=2.5e-40  Score=306.70  Aligned_cols=290  Identities=32%  Similarity=0.500  Sum_probs=242.8

Q ss_pred             eeEEEccCC-CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC---
Q 020768           19 MAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT---   94 (321)
Q Consensus        19 ~a~~~~~~~-~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~---   94 (321)
                      |++++.+++ .+++++++.|.|+++||+|||.++++|+.|+....|.+..   ..+|.++|||++|+|+++|++++.   
T Consensus         2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~~~~   78 (361)
T cd08231           2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPR---VPLPIILGHEGVGRVVALGGGVTTDVA   78 (361)
T ss_pred             eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCC---CCCCcccccCCceEEEEeCCCcccccc
Confidence            688888765 8999999999999999999999999999999988875421   356889999999999999999986   


Q ss_pred             ---CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccC------CCCCcceeEEEecCC-cEEECCCCCChhhhccc
Q 020768           95 ---LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP------PVHGSLANQVVHPAD-LCFKLPDNVSLEEGAMC  164 (321)
Q Consensus        95 ---~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~G~~~~~~~v~~~-~~~~ip~~~~~~~aa~~  164 (321)
                         |++||+|+..+..+|++|.+|+.+.+++|.+..+++..      ...|+|++|+.++++ .++++|++++..+++++
T Consensus        79 ~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~  158 (361)
T cd08231          79 GEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPA  158 (361)
T ss_pred             CCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHHh
Confidence               99999999999899999999999999999887655432      246999999999986 79999999998888876


Q ss_pred             -hhhHHHHHHHHHc-CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCc-ccHH
Q 020768          165 -EPLSVGLHACRRA-NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL-QDIA  241 (321)
Q Consensus       165 -~~~~~a~~~l~~~-~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~-~~~~  241 (321)
                       .++.+||++++.. ..++|++|||+|+|++|++++|+|+++|++.++++++++++.++++++|++.+++++... .++.
T Consensus       159 ~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~  238 (361)
T cd08231         159 NCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDELPDPQRR  238 (361)
T ss_pred             cCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccccHHHH
Confidence             5888999999764 445999999998899999999999999996688888999999999999999888764321 1122


Q ss_pred             HHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC--CccccchhhhccceEEEEeehhHH
Q 020768          242 EEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL--EMTVPLTPAAARYLIYSFLFHFFL  313 (321)
Q Consensus       242 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~k~~~i~g~~~~~~  313 (321)
                      +.+.++  ..+.++|++|||+|+...+..++++++++|+++.+|....  ...++...++.+++++.|++.+..
T Consensus       239 ~~i~~~--~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (361)
T cd08231         239 AIVRDI--TGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDP  310 (361)
T ss_pred             HHHHHH--hCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCCc
Confidence            334443  2356899999999987788999999999999999996643  234555557889999999886543

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=8.7e-40  Score=304.27  Aligned_cols=288  Identities=26%  Similarity=0.398  Sum_probs=238.9

Q ss_pred             hhceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768           16 EVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (321)
Q Consensus        16 ~~~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~   94 (321)
                      .+||++++..+ +.++++++|.|++.++||+|||.++++|++|++.+.|...    ..+|+++|||++|+|+++|++++.
T Consensus         6 ~~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~----~~~p~v~G~e~~G~V~~vG~~v~~   81 (373)
T cd08299           6 IKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV----TPFPVILGHEAAGIVESVGEGVTT   81 (373)
T ss_pred             ceeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC----CCCCccccccceEEEEEeCCCCcc
Confidence            45899998754 5799999999999999999999999999999999887541    356889999999999999999999


Q ss_pred             CCCCCEEEEcCCccCCCCccccCCCCCCCCCcccccc--------------------CCCCCcceeEEEecCCcEEECCC
Q 020768           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT--------------------PPVHGSLANQVVHPADLCFKLPD  154 (321)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~G~~~~~~~v~~~~~~~ip~  154 (321)
                      |++||+|++.+..+|++|.+|+.+++++|.+....+.                    ....|+|+||+++++++++++|+
T Consensus        82 ~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~  161 (373)
T cd08299          82 VKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDA  161 (373)
T ss_pred             CCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCC
Confidence            9999999999888999999999999999987543210                    00358999999999999999999


Q ss_pred             CCChhhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEe
Q 020768          155 NVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVK  232 (321)
Q Consensus       155 ~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~  232 (321)
                      ++++.+++++. ++.++|+++ +.+.+++|++|+|+|+|++|++++++|+++|+..|++++++++|.+.++++|++.+++
T Consensus       162 ~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~  241 (373)
T cd08299         162 AAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECIN  241 (373)
T ss_pred             CCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEec
Confidence            99999988765 778899886 5688999999999988999999999999999866899999999999999999998887


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHc-ccCCEEEEEcCCCCCccccchh-hhccceEEEEeeh
Q 020768          233 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSAT-RAGGKVCLVGMGHLEMTVPLTP-AAARYLIYSFLFH  310 (321)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~-~~~k~~~i~g~~~  310 (321)
                      ..+...++.+.+.++.   ++++|++|||+|++..+..++..+ +++|+++.+|......++++.+ .+.++.++.|++.
T Consensus       242 ~~~~~~~~~~~v~~~~---~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~  318 (373)
T cd08299         242 PQDYKKPIQEVLTEMT---DGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVF  318 (373)
T ss_pred             ccccchhHHHHHHHHh---CCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHHHHhcCCeEEEEEe
Confidence            6543334555555542   357999999999877777766655 6799999999764433444443 2457889998865

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=1.7e-40  Score=301.29  Aligned_cols=260  Identities=20%  Similarity=0.249  Sum_probs=211.0

Q ss_pred             hceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecc-cccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCC
Q 020768           17 VNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGIC-GSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (321)
Q Consensus        17 ~~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~-~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~   95 (321)
                      +||++++.+++.+++++.|.|+|+++||+|||.++++| ++|+..+.|.++......+|.++|||++|+|+++|+++ +|
T Consensus         1 ~~ka~~~~~~~~l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~~   79 (308)
T TIGR01202         1 KTQAIVLSGPNQIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-GF   79 (308)
T ss_pred             CceEEEEeCCCeEEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-CC
Confidence            47899998888999999999999999999999999996 69998888764321113569999999999999999998 69


Q ss_pred             CCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHHHH
Q 020768           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACR  175 (321)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~  175 (321)
                      ++||+|++.    |..|..|..               ...|+|+||++++++.++++|++++++. +.++++++||++++
T Consensus        80 ~vGdrV~~~----~~~c~~~~~---------------~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~~~~~a~~~~~  139 (308)
T TIGR01202        80 RPGDRVFVP----GSNCYEDVR---------------GLFGGASKRLVTPASRVCRLDPALGPQG-ALLALAATARHAVA  139 (308)
T ss_pred             CCCCEEEEe----Ccccccccc---------------ccCCcccceEEcCHHHceeCCCCCCHHH-HhhhHHHHHHHHHH
Confidence            999999874    223333211               1359999999999999999999998754 55667789999987


Q ss_pred             HcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCc
Q 020768          176 RANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (321)
Q Consensus       176 ~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~  255 (321)
                      ... .++++++|+|+|++|++++|+|+++|++.+++++.+++|++.+.++   .+++..+   +           .+.++
T Consensus       140 ~~~-~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~~~~---~-----------~~~g~  201 (308)
T TIGR01202       140 GAE-VKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLDPEK---D-----------PRRDY  201 (308)
T ss_pred             hcc-cCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccChhh---c-----------cCCCC
Confidence            643 4689999999999999999999999997777888888887776653   3333211   0           14679


Q ss_pred             cEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehhHHHh
Q 020768          256 DVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFLIV  315 (321)
Q Consensus       256 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~  315 (321)
                      |++|||+|++..++.++++++++|+++++|....+.++++..++.|++++.|+..+....
T Consensus       202 Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  261 (308)
T TIGR01202       202 RAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPAFMKEARLRIAAEWQPGD  261 (308)
T ss_pred             CEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCCCcccccchhhhcceEEEEecccchhH
Confidence            999999999878999999999999999999876667788888899999999987654443

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=9.8e-41  Score=279.19  Aligned_cols=260  Identities=28%  Similarity=0.363  Sum_probs=228.5

Q ss_pred             cchhhceeEEEc---cCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeC
Q 020768           13 DGEEVNMAAWLL---GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG   89 (321)
Q Consensus        13 ~~~~~~~a~~~~---~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG   89 (321)
                      ..|+..|-++++   +...+++++.|.|+|.++|++||.+|+|+|+.|..+++|.+.   +.+.|++||.|++|+|+++|
T Consensus         4 ~~p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~---~~plPytpGmEaaGvVvAvG   80 (336)
T KOG1197|consen    4 ASPPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYD---PAPLPYTPGMEAAGVVVAVG   80 (336)
T ss_pred             CCCchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccC---CCCCCcCCCcccceEEEEec
Confidence            445667777777   347899999999999999999999999999999999999873   26789999999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhH
Q 020768           90 SEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLS  168 (321)
Q Consensus        90 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~  168 (321)
                      ++|+++++||+|...                            ...|.|+|+..+|...++++|+.+++.+||++ ....
T Consensus        81 ~gvtdrkvGDrVayl----------------------------~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~l  132 (336)
T KOG1197|consen   81 EGVTDRKVGDRVAYL----------------------------NPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGL  132 (336)
T ss_pred             CCccccccccEEEEe----------------------------ccchhhheeccccceeeccCCcccCHHHHHHHHHHHH
Confidence            999999999999865                            25699999999999999999999999998754 4788


Q ss_pred             HHHHHHHH-cCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHH
Q 020768          169 VGLHACRR-ANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEK  246 (321)
Q Consensus       169 ~a~~~l~~-~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~  246 (321)
                      |||..++. .++++|++|||+.| |++|++++|++++.|. .+|++.++.+|.+.+++.|+++.|+++.  +|+.+.+.+
T Consensus       133 TAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~h~I~y~~--eD~v~~V~k  209 (336)
T KOG1197|consen  133 TAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAEHPIDYST--EDYVDEVKK  209 (336)
T ss_pred             HHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCcceeeccc--hhHHHHHHh
Confidence            89988854 78999999999976 9999999999999999 7889999999999999999999999865  688887777


Q ss_pred             HHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-CccccchhhhccceEEEEee
Q 020768          247 IQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARYLIYSFLF  309 (321)
Q Consensus       247 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~  309 (321)
                      +.  .++|+|+++|.+|. +++...+.+|++.|.++.+|+.++ ..++++..|-.|.+++.-.+
T Consensus       210 iT--ngKGVd~vyDsvG~-dt~~~sl~~Lk~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrps  270 (336)
T KOG1197|consen  210 IT--NGKGVDAVYDSVGK-DTFAKSLAALKPMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPS  270 (336)
T ss_pred             cc--CCCCceeeeccccc-hhhHHHHHHhccCceEEEeccccCCCCCeehhhcChhhhhhccHh
Confidence            63  48999999999997 699999999999999999997765 46788887777777665443

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=3.5e-39  Score=303.77  Aligned_cols=281  Identities=25%  Similarity=0.364  Sum_probs=225.1

Q ss_pred             hceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhh-hccccCCc---CCCCCcccccceeEEEEEeCCCC
Q 020768           17 VNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYL-KTLRCADF---VVKEPMVIGHECAGVIEKVGSEV   92 (321)
Q Consensus        17 ~~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~-~g~~~~~~---~~~~p~~~G~e~vG~V~~vG~~v   92 (321)
                      +||++++.+++.++++|+|.|.|+++||+|||.++++|++|++.+ .|......   ...+|+++|||++|+|+++|++|
T Consensus         2 ~~~a~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v   81 (410)
T cd08238           2 KTKAWRMYGKGDLRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGKKW   81 (410)
T ss_pred             CcEEEEEEcCCceEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCCCc
Confidence            589999999889999999999999999999999999999999976 44321110   12468899999999999999999


Q ss_pred             C-CCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCC----cEEECCCCCChhhhccchhh
Q 020768           93 K-TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD----LCFKLPDNVSLEEGAMCEPL  167 (321)
Q Consensus        93 ~-~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~----~~~~ip~~~~~~~aa~~~~~  167 (321)
                      + .|++||+|++.+...|++|..|.. +          + ...+|+|+||++++++    .++++|+++++.+|++++++
T Consensus        82 ~~~~~vGdrV~~~~~~~c~~~~~c~~-~----------g-~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl  149 (410)
T cd08238          82 QGKYKPGQRFVIQPALILPDGPSCPG-Y----------S-YTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPL  149 (410)
T ss_pred             cCCCCCCCEEEEcCCcCCCCCCCCCC-c----------c-ccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchH
Confidence            8 599999999998888998887731 1          1 1357999999999987    68999999999999877665


Q ss_pred             HHHH---HHH---------HHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcC--CCeEEEEeCChhHHHHHHHc-------
Q 020768          168 SVGL---HAC---------RRANIGPETNVLIMGA-GPIGLVTMLGARAFG--APRIVIVDVDDYRLSVAKEL-------  225 (321)
Q Consensus       168 ~~a~---~~l---------~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g--~~~vv~v~~~~~~~~~~~~~-------  225 (321)
                      ++++   .++         +.+++++|++|+|+|+ |++|++++|+|+++|  +..|++++.+++|+++++++       
T Consensus       150 ~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~  229 (410)
T cd08238         150 SCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAAS  229 (410)
T ss_pred             HHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccc
Confidence            5543   222         3467899999999986 999999999999975  45689999999999999997       


Q ss_pred             -CCC-eEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCC-CC--Cccccchhhhc
Q 020768          226 -GAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG-HL--EMTVPLTPAAA  300 (321)
Q Consensus       226 -g~~-~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~--~~~~~~~~~~~  300 (321)
                       |++ .+++..+ ..++.+.++++.  .+.++|++||++|.+..++.++++++++|+++.++.. ..  ..++++..+++
T Consensus       230 ~Ga~~~~i~~~~-~~~~~~~v~~~t--~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~  306 (410)
T cd08238         230 RGIELLYVNPAT-IDDLHATLMELT--GGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHY  306 (410)
T ss_pred             cCceEEEECCCc-cccHHHHHHHHh--CCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccccccHHHhhh
Confidence             665 3455322 135555555542  3568999999999888999999999999998877543 22  35678888999


Q ss_pred             cceEEEEeehhH
Q 020768          301 RYLIYSFLFHFF  312 (321)
Q Consensus       301 k~~~i~g~~~~~  312 (321)
                      |++++.|+....
T Consensus       307 ~~~~i~g~~~~~  318 (410)
T cd08238         307 NNTHYVGTSGGN  318 (410)
T ss_pred             cCcEEEEeCCCC
Confidence            999999987543

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=5.6e-39  Score=294.54  Aligned_cols=282  Identities=24%  Similarity=0.362  Sum_probs=242.5

Q ss_pred             ceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (321)
Q Consensus        18 ~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~   96 (321)
                      ||++++.++ +.++++++|.|.++++||+|||.++++|++|+..+.|..+.   ...|.++|||++|+|+++|++++.|+
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~p~~~g~e~~G~v~~vG~~v~~~~   77 (333)
T cd08296           1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPG---LSYPRVPGHEVVGRIDAVGEGVSRWK   77 (333)
T ss_pred             CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCC---CCCCcccCcceeEEEEEECCCCccCC
Confidence            789999877 68999999999999999999999999999999988775422   34588999999999999999999999


Q ss_pred             CCCEEEEcC-CccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHHH
Q 020768           97 PGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC  174 (321)
Q Consensus        97 ~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l  174 (321)
                      +||+|++.+ ...|++|.+|..++++.|.+....+. ...|++++|+.++...++++|+++++.+++.+. ++.++|+++
T Consensus        78 ~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~-~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~  156 (333)
T cd08296          78 VGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGV-TRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNAL  156 (333)
T ss_pred             CCCEEEeccccCCCCCChhhhCcCcccCCCCCccCc-ccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHH
Confidence            999998854 45899999999999999998765432 346999999999999999999999998887554 677888888


Q ss_pred             HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCC
Q 020768          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~  254 (321)
                      +...++++++|||+|+|++|++++|+|+++|+ .++++++++++.++++++|++.++++..  .++.+.+.++     .+
T Consensus       157 ~~~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~~~~~-----~~  228 (333)
T cd08296         157 RNSGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSK--EDVAEALQEL-----GG  228 (333)
T ss_pred             HhcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCC--ccHHHHHHhc-----CC
Confidence            77789999999999999999999999999999 5888889999999999999998887543  3455444443     46


Q ss_pred             ccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehh
Q 020768          255 IDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF  311 (321)
Q Consensus       255 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~  311 (321)
                      +|++||+.|.+..+...+++++++|+++.+|......+++...++.|++++.|+...
T Consensus       229 ~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~  285 (333)
T cd08296         229 AKLILATAPNAKAISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGWPSG  285 (333)
T ss_pred             CCEEEECCCchHHHHHHHHHcccCCEEEEEecCCCCCCcCHHHHhhcccEEEEeCcC
Confidence            999999998778899999999999999999977655567777788999999998653

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=7.8e-39  Score=295.61  Aligned_cols=286  Identities=30%  Similarity=0.417  Sum_probs=239.4

Q ss_pred             ceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCC
Q 020768           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (321)
Q Consensus        18 ~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~   97 (321)
                      ||++++.+++.+++++.+.|.+.++||+|||.++++|++|++.+.+.+..   .+.|.++|||++|+|+++|++++++++
T Consensus         1 mka~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~---~~~~~~~G~e~~G~V~~vG~~v~~~~~   77 (351)
T cd08285           1 MKAFAMLGIGKVGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPG---ERHGMILGHEAVGVVEEVGSEVKDFKP   77 (351)
T ss_pred             CceEEEccCCccEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCC---CCCCcccCcceEEEEEEecCCcCccCC
Confidence            79999998888999999999999999999999999999999887765422   355889999999999999999999999


Q ss_pred             CCEEEEcCCccCCCCccccCCCCCCCCCcc--ccccCCCCCcceeEEEecCC--cEEECCCCCChhhhccc-hhhHHHHH
Q 020768           98 GDRVALEPGISCWRCDHCKGGRYNLCPEMK--FFATPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMC-EPLSVGLH  172 (321)
Q Consensus        98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~G~~~~~~~v~~~--~~~~ip~~~~~~~aa~~-~~~~~a~~  172 (321)
                      ||+|+..+..+|++|..|..+++++|.+..  +..+...+|+|+||+.++..  .++++|+++++.+++.+ .++.++++
T Consensus        78 Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~  157 (351)
T cd08285          78 GDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFH  157 (351)
T ss_pred             CCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhHHH
Confidence            999999887899999999999999998752  11112357999999999974  89999999999998866 47788999


Q ss_pred             HHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhC
Q 020768          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       173 ~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~  252 (321)
                      +++.+.+++|++|||+|+|++|++++|+|+++|...++++++++++.++++++|++.+++++.  .++.+.+.++.  .+
T Consensus       158 ~~~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~i~~~~--~~  233 (351)
T cd08285         158 GAELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKN--GDVVEQILKLT--GG  233 (351)
T ss_pred             HHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCC--CCHHHHHHHHh--CC
Confidence            887788999999999988999999999999999977899999999999999999998887543  35555555542  35


Q ss_pred             CCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCc--cccchh--hhccceEEEEeeh
Q 020768          253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEM--TVPLTP--AAARYLIYSFLFH  310 (321)
Q Consensus       253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~--~~~k~~~i~g~~~  310 (321)
                      .++|+++|++|++..+..++++|+++|+++.+|......  .++..+  ...+..++.+.+.
T Consensus       234 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  295 (351)
T cd08285         234 KGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLC  295 (351)
T ss_pred             CCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeec
Confidence            679999999998788999999999999999999765432  333222  2356677776553

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.8e-38  Score=293.06  Aligned_cols=289  Identities=28%  Similarity=0.516  Sum_probs=242.1

Q ss_pred             ceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhcccc--CC----cCCCCCcccccceeEEEEEeCCC
Q 020768           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRC--AD----FVVKEPMVIGHECAGVIEKVGSE   91 (321)
Q Consensus        18 ~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~--~~----~~~~~p~~~G~e~vG~V~~vG~~   91 (321)
                      ||++++++++.+++++.+.|+++++||+||+.++++|+.|+..+.|...  ..    ....+|.++|||++|+|+++|++
T Consensus         1 mka~~~~~~~~~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~   80 (350)
T cd08256           1 MRAVVCHGPQDYRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGEG   80 (350)
T ss_pred             CeeEEEecCCceEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCCC
Confidence            7899998888999999999999999999999999999999998876421  00    00145778999999999999999


Q ss_pred             CC--CCCCCCEEEEcCCccCCCCccccCCCCCCCCCcccccc-CCCCCcceeEEEecCC-cEEECCCCCChhhhccchhh
Q 020768           92 VK--TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT-PPVHGSLANQVVHPAD-LCFKLPDNVSLEEGAMCEPL  167 (321)
Q Consensus        92 v~--~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~G~~~~~~~v~~~-~~~~ip~~~~~~~aa~~~~~  167 (321)
                      ++  +|++||+|+..+..+|++|.+|+.+..+.|+....++. ....|+|++|+.++++ .++++|+++++.+++.+.++
T Consensus        81 v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~~~~~  160 (350)
T cd08256          81 AEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAILIEPL  160 (350)
T ss_pred             cccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhhhhHH
Confidence            99  89999999999999999999999999999987654332 1257999999999987 67899999999888866788


Q ss_pred             HHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHH
Q 020768          168 SVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKI  247 (321)
Q Consensus       168 ~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~  247 (321)
                      .++|++++.+++++|++|+|.|+|++|++++|+|+++|+..++++++++++.++++++|++.+++..  ..++.+.+.++
T Consensus       161 ~ta~~a~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~--~~~~~~~~~~~  238 (350)
T cd08256         161 ACALHAVDRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPP--EVDVVEKIKEL  238 (350)
T ss_pred             HHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCC--CcCHHHHHHHH
Confidence            8999998778999999999977799999999999999997788899999999999999998877643  24555556554


Q ss_pred             HHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhh-hccceEEEEeeh
Q 020768          248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPA-AARYLIYSFLFH  310 (321)
Q Consensus       248 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~k~~~i~g~~~  310 (321)
                      .  .+.++|++||++|++..+..++++++++|+++.+|......++++..+ ..+++++.|+..
T Consensus       239 ~--~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~  300 (350)
T cd08256         239 T--GGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHL  300 (350)
T ss_pred             h--CCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCccChhHhhcccccEEEEecc
Confidence            2  356799999999976678899999999999999996554455565544 467888888654

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=100.00  E-value=1.8e-38  Score=292.29  Aligned_cols=290  Identities=55%  Similarity=0.938  Sum_probs=242.0

Q ss_pred             eEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 020768           20 AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGD   99 (321)
Q Consensus        20 a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd   99 (321)
                      +.++.++..+++++.|.|.+.++||+|||.++++|+.|+..+.+...+......|.++|+|++|+|+++|++++.|++||
T Consensus         1 ~~~~~~~~~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd   80 (343)
T cd05285           1 AAVLHGPGDLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGD   80 (343)
T ss_pred             CceEecCCceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCCC
Confidence            35777888999999999999999999999999999999987643221211124577899999999999999999999999


Q ss_pred             EEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHHHHHcCC
Q 020768          100 RVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANI  179 (321)
Q Consensus       100 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~~~~  179 (321)
                      +|++.+..+|++|.+|..+.+++|++..+.+.....|+|++|+.++++.++++|+++++.+++.+.++++++++++.+.+
T Consensus        81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~a~~~~~~~~~  160 (343)
T cd05285          81 RVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALVEPLSVGVHACRRAGV  160 (343)
T ss_pred             EEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhhhHHHHHHHHHHhcCC
Confidence            99999888999999999999999998755443345799999999999999999999999998877788889988878999


Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcc-cHHHHHHHHHHHhCCCccEE
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQ-DIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~-~~~~~~~~~~~~~~~~~d~v  258 (321)
                      ++|+++||+|+|++|++++|+|+++|.++++++++++++.++++++|++.+++.++... .+.+.+.++  ..+.++|++
T Consensus       161 ~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~--~~~~~~d~v  238 (343)
T cd05285         161 RPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAEL--LGGKGPDVV  238 (343)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEeccccccchhHHHHHHHH--hCCCCCCEE
Confidence            99999999988999999999999999965888888899999999999999887553211 124445444  235679999


Q ss_pred             EEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehh
Q 020768          259 FDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF  311 (321)
Q Consensus       259 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~  311 (321)
                      |||+|+...++..+++++++|+++.+|.......+++..+..+++++.++..+
T Consensus       239 ld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (343)
T cd05285         239 IECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRGVFRY  291 (343)
T ss_pred             EECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHhhCCcEEEEeccC
Confidence            99999866889999999999999999966544556666777889999887643

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=4.4e-38  Score=292.13  Aligned_cols=285  Identities=29%  Similarity=0.430  Sum_probs=240.7

Q ss_pred             hhceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768           16 EVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (321)
Q Consensus        16 ~~~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~   94 (321)
                      ++|||+++.++ +.+++++.+.|.++++||+|||.++++|++|+....+.++    ...|.++|||++|+|+++|++++.
T Consensus         1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~----~~~p~v~G~e~~G~V~~vG~~v~~   76 (365)
T cd08278           1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP----TPLPAVLGHEGAGVVEAVGSAVTG   76 (365)
T ss_pred             CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC----CCCCcccccceeEEEEEeCCCccc
Confidence            46999999864 5789999999999999999999999999999999887542    345889999999999999999999


Q ss_pred             CCCCCEEEEcCCccCCCCccccCCCCCCCCCcccc---cc-------------------CCCCCcceeEEEecCCcEEEC
Q 020768           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT-------------------PPVHGSLANQVVHPADLCFKL  152 (321)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~~G~~~~~~~v~~~~~~~i  152 (321)
                      |++||+|++.+. .|++|.+|+.+..++|.+....   +.                   ....|+|++|+.+++++++++
T Consensus        77 ~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~i  155 (365)
T cd08278          77 LKPGDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKV  155 (365)
T ss_pred             CCCCCEEEEccc-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEEC
Confidence            999999999764 8999999999999999865321   00                   012589999999999999999


Q ss_pred             CCCCChhhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeE
Q 020768          153 PDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI  230 (321)
Q Consensus       153 p~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~v  230 (321)
                      |+++++.+++.+. .+.+|+.++ +...+++|++|||+|+|++|++++|+|+++|++.+++++.+++|.++++++|++.+
T Consensus       156 P~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~  235 (365)
T cd08278         156 DKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHV  235 (365)
T ss_pred             CCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEE
Confidence            9999998887554 677788776 45788999999999889999999999999999779999999999999999999888


Q ss_pred             EecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCC--CCccccchhhhccceEEEEe
Q 020768          231 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH--LEMTVPLTPAAARYLIYSFL  308 (321)
Q Consensus       231 i~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~k~~~i~g~  308 (321)
                      ++...  .++.+.+.++.   +.++|+++||+|.+..+..++++++++|+++.+|...  ....+++..++.+++++.++
T Consensus       236 i~~~~--~~~~~~v~~~~---~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  310 (365)
T cd08278         236 INPKE--EDLVAAIREIT---GGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRGV  310 (365)
T ss_pred             ecCCC--cCHHHHHHHHh---CCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEEe
Confidence            87543  35555555542   5689999999998778899999999999999999653  33567777777899999887


Q ss_pred             eh
Q 020768          309 FH  310 (321)
Q Consensus       309 ~~  310 (321)
                      ..
T Consensus       311 ~~  312 (365)
T cd08278         311 IE  312 (365)
T ss_pred             ec
Confidence            53

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=3.6e-38  Score=289.75  Aligned_cols=287  Identities=29%  Similarity=0.477  Sum_probs=243.7

Q ss_pred             ceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (321)
Q Consensus        18 ~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~   96 (321)
                      ||++++..+ +.+++.+.+.|.++++|++|||.++++|++|+....|.+.......+|.++|+|++|+|+++|++++.|+
T Consensus         1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~   80 (340)
T cd05284           1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK   80 (340)
T ss_pred             CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence            689998865 6799999999999999999999999999999998877553322345688999999999999999999999


Q ss_pred             CCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHHHH
Q 020768           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR  175 (321)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l~  175 (321)
                      +||+|+..+...|+.|..|..+..++|++..+.+. ..+|+|++|+.+++++++++|+++++++++.+. .+.+||+++.
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~  159 (340)
T cd05284          81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGI-GTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVK  159 (340)
T ss_pred             CCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCc-cCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHHHH
Confidence            99999999888999999999999999999887765 568999999999999999999999999888664 6788999985


Q ss_pred             H--cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCC
Q 020768          176 R--ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       176 ~--~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~  253 (321)
                      .  ..+.++++|||+|+|++|++++|+|+.+|...++++++++++.+.++++|++++++.+.  . +.+.++++.  .+.
T Consensus       160 ~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~-~~~~i~~~~--~~~  234 (340)
T cd05284         160 KALPYLDPGSTVVVIGVGGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNASD--D-VVEEVRELT--GGR  234 (340)
T ss_pred             HhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHhCCcEEEcCCc--c-HHHHHHHHh--CCC
Confidence            5  36889999999999779999999999999326788888899999999999988877543  2 555555542  246


Q ss_pred             CccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehh
Q 020768          254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF  311 (321)
Q Consensus       254 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~  311 (321)
                      ++|+++|++|+....+.++++|+++|+++.+|.... .+++...++.|++++.++...
T Consensus       235 ~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~  291 (340)
T cd05284         235 GADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-GRLPTSDLVPTEISVIGSLWG  291 (340)
T ss_pred             CCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-CccCHHHhhhcceEEEEEecc
Confidence            799999999987788999999999999999996643 445555556799999987643

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=6.5e-38  Score=291.01  Aligned_cols=283  Identities=28%  Similarity=0.441  Sum_probs=238.1

Q ss_pred             eeEEEcc-CCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCC
Q 020768           19 MAAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (321)
Q Consensus        19 ~a~~~~~-~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~   97 (321)
                      |++++.. .+.++++++|.|.++++||+||+.++++|+.|++.+.+...    ..+|.++|||++|+|+++|++++.+++
T Consensus         2 ~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~----~~~~~i~g~e~~G~V~~vG~~v~~~~~   77 (365)
T cd05279           2 KAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP----TPLPVILGHEGAGIVESIGPGVTTLKP   77 (365)
T ss_pred             ceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC----CCCCcccccceeEEEEEeCCCcccCCC
Confidence            5777764 45899999999999999999999999999999998877542    345789999999999999999999999


Q ss_pred             CCEEEEcCCccCCCCccccCCCCCCCCCccccccC--------------------CCCCcceeEEEecCCcEEECCCCCC
Q 020768           98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP--------------------PVHGSLANQVVHPADLCFKLPDNVS  157 (321)
Q Consensus        98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~G~~~~~~~v~~~~~~~ip~~~~  157 (321)
                      ||+|++.+..+|++|.+|..+.+++|.+....+..                    ...|+|++|+.++++.++++|++++
T Consensus        78 Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~  157 (365)
T cd05279          78 GDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAP  157 (365)
T ss_pred             CCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCC
Confidence            99999998889999999999999999875543210                    0247999999999999999999999


Q ss_pred             hhhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCC
Q 020768          158 LEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST  235 (321)
Q Consensus       158 ~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~  235 (321)
                      +.+++.+. .+.++|+++ +.+.+++|++|||+|+|++|++++|+|+++|+..++++++++++.++++++|++.+++..+
T Consensus       158 ~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~  237 (365)
T cd05279         158 LEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRD  237 (365)
T ss_pred             HHHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeeccccc
Confidence            99888665 788899886 4588999999999988999999999999999977888888999999999999998887544


Q ss_pred             CcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcc-cCCEEEEEcCCC--CCccccchhhhccceEEEEee
Q 020768          236 NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGH--LEMTVPLTPAAARYLIYSFLF  309 (321)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~-~~G~~v~~g~~~--~~~~~~~~~~~~k~~~i~g~~  309 (321)
                      .+.++.+.+.++.   +.++|++||++|....+..++++++ ++|+++.+|...  ....++...+ .++.++.|++
T Consensus       238 ~~~~~~~~l~~~~---~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g~~  310 (365)
T cd05279         238 QDKPIVEVLTEMT---DGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-LTGRTIKGTV  310 (365)
T ss_pred             ccchHHHHHHHHh---CCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-hcCCeEEEEe
Confidence            3225555555542   4689999999997778899999999 999999999653  3455666666 6888998874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=7e-38  Score=292.82  Aligned_cols=288  Identities=30%  Similarity=0.479  Sum_probs=240.0

Q ss_pred             ceeEEEccCCCeEEEEecCCCC-CCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768           18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (321)
Q Consensus        18 ~~a~~~~~~~~l~~~e~~~p~~-~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~   96 (321)
                      ||++++.+++.++++++|.|.| +++||+||+.++++|++|+..+.|.+..   .++|.++|||++|+|+++|+++++++
T Consensus         1 m~a~~~~~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~~~   77 (386)
T cd08283           1 MKALVWHGKGDVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPG---MKKGDILGHEFMGVVEEVGPEVRNLK   77 (386)
T ss_pred             CeeEEEecCCCceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCC---CCCCccccccceEEEEEeCCCCCCCC
Confidence            7899998889999999999998 5999999999999999999998876533   34688999999999999999999999


Q ss_pred             CCCEEEEcCCccCCCCccccCCCCCCCCCcccc---------------cc----CCCCCcceeEEEecCC--cEEECCCC
Q 020768           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---------------AT----PPVHGSLANQVVHPAD--LCFKLPDN  155 (321)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~----~~~~G~~~~~~~v~~~--~~~~ip~~  155 (321)
                      +||+|+..+...|++|.+|+.+.+++|.+....               +.    ...+|+|++|++++.+  .++++|++
T Consensus        78 ~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~  157 (386)
T cd08283          78 VGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDD  157 (386)
T ss_pred             CCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECCCC
Confidence            999999998889999999999999999875321               10    0246999999999987  89999999


Q ss_pred             CChhhhccch-hhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecC
Q 020768          156 VSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS  234 (321)
Q Consensus       156 ~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~  234 (321)
                      +++.+|+.+. .+.+||++++.+++++|++|||+|+|.+|++++++|++.|...+++++.++++.+++++++...++++.
T Consensus       158 ~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi~~~  237 (386)
T cd08283         158 LSDEKALFLSDILPTGYHAAELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETINFE  237 (386)
T ss_pred             CCHHHHhhhccchhhhHHHHhhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEEcCC
Confidence            9999988654 788999999778899999999998899999999999999986699999999999999998544566543


Q ss_pred             CCcccHHHHHHHHHHHhCCCccEEEEcCCC---------------------HHHHHHHHHHcccCCEEEEEcCCCC-Ccc
Q 020768          235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGF---------------------NKTMSTALSATRAGGKVCLVGMGHL-EMT  292 (321)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~---------------------~~~~~~~~~~l~~~G~~v~~g~~~~-~~~  292 (321)
                      .. .++.+.+.++.  .+.++|++||++|+                     ...+..++++++++|+++.+|.... ...
T Consensus       238 ~~-~~~~~~l~~~~--~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~  314 (386)
T cd08283         238 EV-DDVVEALRELT--GGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGTVNK  314 (386)
T ss_pred             cc-hHHHHHHHHHc--CCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCCcCc
Confidence            32 13555555542  24579999999975                     2467889999999999999997654 344


Q ss_pred             ccchhhhccceEEEEeehh
Q 020768          293 VPLTPAAARYLIYSFLFHF  311 (321)
Q Consensus       293 ~~~~~~~~k~~~i~g~~~~  311 (321)
                      ++...++.|++++.+...+
T Consensus       315 ~~~~~~~~~~~~i~~~~~~  333 (386)
T cd08283         315 FPIGAAMNKGLTLRMGQTH  333 (386)
T ss_pred             cCHHHHHhCCcEEEeccCC
Confidence            5665678899999997543

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=100.00  E-value=7.8e-38  Score=287.81  Aligned_cols=286  Identities=31%  Similarity=0.536  Sum_probs=239.7

Q ss_pred             ceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (321)
Q Consensus        18 ~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~   96 (321)
                      ||++++.++ +.+++.++|.|.|+++||+||+.++++|++|+.++.+.........+|.++|||++|+|+++|++++.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~   80 (341)
T PRK05396          1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK   80 (341)
T ss_pred             CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence            678888755 4699999999999999999999999999999987765322211234678999999999999999999999


Q ss_pred             CCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHHHHH
Q 020768           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRR  176 (321)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~  176 (321)
                      +||+|+..+..+|+.|.+|..+.+++|+...+.+ ...+|+|++|+.++.+.++++|+++++.+++.+.++.++++++..
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~~~~~~~~~~~~~  159 (341)
T PRK05396         81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVG-VNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIFDPFGNAVHTALS  159 (341)
T ss_pred             CCCEEEECCCCCCCCChhhhCcChhhCCCcceee-ecCCCcceeeEEechHHeEECcCCCCHHHhHhhhHHHHHHHHHHc
Confidence            9999999999999999999999999998765443 346799999999999999999999999888866677777665533


Q ss_pred             cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d  256 (321)
                       ...+|++|+|+|+|++|++++|+|+++|+++++++++++++.++++++|++.++++++  .++.+.++++.  .+.++|
T Consensus       160 -~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~--~~~~~~~~~~~--~~~~~d  234 (341)
T PRK05396        160 -FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAK--EDLRDVMAELG--MTEGFD  234 (341)
T ss_pred             -CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc--ccHHHHHHHhc--CCCCCC
Confidence             3468999999888999999999999999966888888899999999999998887543  45555555542  356899


Q ss_pred             EEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEee
Q 020768          257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLF  309 (321)
Q Consensus       257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~  309 (321)
                      ++|||.|....++..+++|+++|+++.+|.......++...+.++++++.|+.
T Consensus       235 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~  287 (341)
T PRK05396        235 VGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKGIY  287 (341)
T ss_pred             EEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCcccHHHHhhcceEEEEEE
Confidence            99999998788899999999999999999765545556677888999998864

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=6.3e-38  Score=293.90  Aligned_cols=296  Identities=22%  Similarity=0.214  Sum_probs=242.8

Q ss_pred             ccchhhceeEEEcc-----C-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCc------C-CCCCcccc
Q 020768           12 EDGEEVNMAAWLLG-----V-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF------V-VKEPMVIG   78 (321)
Q Consensus        12 ~~~~~~~~a~~~~~-----~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~------~-~~~p~~~G   78 (321)
                      -..|.+||++++..     + +.++++++|.|.++++||+|||.++++|++|+..+.+......      . ...+.++|
T Consensus         7 ~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G   86 (393)
T cd08246           7 GVVPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGG   86 (393)
T ss_pred             CcCchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccc
Confidence            34788999998852     1 3588999999999999999999999999999988765411100      0 11235899


Q ss_pred             cceeEEEEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCCh
Q 020768           79 HECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSL  158 (321)
Q Consensus        79 ~e~vG~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~  158 (321)
                      ||++|+|+++|++++.|++||+|++.+...|++|+.|..+..++|....+++....+|+|++|+.++..+++++|+++++
T Consensus        87 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~  166 (393)
T cd08246          87 SDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSW  166 (393)
T ss_pred             cceEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCH
Confidence            99999999999999999999999999999999999999999999998777776566899999999999999999999999


Q ss_pred             hhhccc-hhhHHHHHHHHH---cCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEec
Q 020768          159 EEGAMC-EPLSVGLHACRR---ANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV  233 (321)
Q Consensus       159 ~~aa~~-~~~~~a~~~l~~---~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~  233 (321)
                      .+++.+ .++.+||+++..   +++++|++|+|+|+ |++|++++++|+++|+ .++++++++++.++++++|++.+++.
T Consensus       167 ~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~vv~~~~s~~~~~~~~~~G~~~~i~~  245 (393)
T cd08246         167 EEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVVSSEEKAEYCRALGAEGVINR  245 (393)
T ss_pred             HHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCCEEEcc
Confidence            988754 588899998743   67899999999998 9999999999999999 46677889999999999999988875


Q ss_pred             CCCc--------------------ccHHHHHHHHHHHhCC-CccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-Cc
Q 020768          234 STNL--------------------QDIAEEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EM  291 (321)
Q Consensus       234 ~~~~--------------------~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~  291 (321)
                      .+.+                    ..+.+.+.++.  .+. ++|++||++|+ ..+...+++++++|+++.+|.... ..
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~--~~~~g~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~  322 (393)
T cd08246         246 RDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDIL--GGREDPDIVFEHPGR-ATFPTSVFVCDRGGMVVICAGTTGYNH  322 (393)
T ss_pred             cccccccccccccchhhhhhhhccchHHHHHHHHh--CCCCCCeEEEECCch-HhHHHHHHHhccCCEEEEEcccCCCCC
Confidence            3321                    01333444432  344 79999999996 678999999999999999986543 34


Q ss_pred             cccchhhhccceEEEEeehh
Q 020768          292 TVPLTPAAARYLIYSFLFHF  311 (321)
Q Consensus       292 ~~~~~~~~~k~~~i~g~~~~  311 (321)
                      .++...++.++.++.|+..+
T Consensus       323 ~~~~~~l~~~~~~i~g~~~~  342 (393)
T cd08246         323 TYDNRYLWMRQKRIQGSHFA  342 (393)
T ss_pred             CCcHHHHhhheeEEEecccC
Confidence            56777788899999998543

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=1.6e-37  Score=286.09  Aligned_cols=286  Identities=30%  Similarity=0.496  Sum_probs=243.0

Q ss_pred             ceeEEEccCCCeEEEEecCCCC-CCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768           18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (321)
Q Consensus        18 ~~a~~~~~~~~l~~~e~~~p~~-~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~   96 (321)
                      ||++++.+++.+++++.|.|+| .++||+|||.++++|+.|+..+.|.+..   ..+|.++|||++|+|+++|++++.++
T Consensus         1 m~a~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~~G~~v~~~~   77 (345)
T cd08286           1 MKALVYHGPGKISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPT---VTPGRILGHEGVGVVEEVGSAVTNFK   77 (345)
T ss_pred             CceEEEecCCceeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCC---CCCCceecccceEEEEEeccCccccC
Confidence            6888888888899999999996 8999999999999999999998876432   24478999999999999999999999


Q ss_pred             CCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCC--cEEECCCCCChhhhccc-hhhHHHHHH
Q 020768           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMC-EPLSVGLHA  173 (321)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~--~~~~ip~~~~~~~aa~~-~~~~~a~~~  173 (321)
                      +||+|++.+...|++|.+|..+..+.|....+..+...+|+|++|+.++.+  .++++|++++..+++.+ ..+.+||.+
T Consensus        78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~  157 (345)
T cd08286          78 VGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYEC  157 (345)
T ss_pred             CCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHHHH
Confidence            999999998889999999999988888876554344567999999999987  99999999999888755 466788876


Q ss_pred             H-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhC
Q 020768          174 C-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       174 l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~  252 (321)
                      + +...+.+|+++||+|+|++|++++|+|+++|...+++++++++|.++++++|++.++++.+  .++.+.+.++.  .+
T Consensus       158 ~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~i~~~~--~~  233 (345)
T cd08286         158 GVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAK--GDAIEQVLELT--DG  233 (345)
T ss_pred             HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecccc--ccHHHHHHHHh--CC
Confidence            5 5578899999999988999999999999999546888889999999999999988887643  34555555543  35


Q ss_pred             CCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeeh
Q 020768          253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFH  310 (321)
Q Consensus       253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~  310 (321)
                      .++|++|||+|....++.+++.|+++|+++.+|......++++..++.|++++.+...
T Consensus       234 ~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  291 (345)
T cd08286         234 RGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKNITITTGLV  291 (345)
T ss_pred             CCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCCCCcCHHHHhhcCcEEEeecC
Confidence            6799999999987788999999999999999996655566777777889999988553

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=100.00  E-value=2.1e-38  Score=283.90  Aligned_cols=233  Identities=24%  Similarity=0.387  Sum_probs=199.4

Q ss_pred             ccccceeEEEEEeCCCCC------CCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccC------CCCCcceeEEE
Q 020768           76 VIGHECAGVIEKVGSEVK------TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP------PVHGSLANQVV  143 (321)
Q Consensus        76 ~~G~e~vG~V~~vG~~v~------~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~G~~~~~~~  143 (321)
                      ++|||++|+|+++|++|+      +|++||||++.+..+|++|.+|+.+++++|++...++..      ..+|+|+||+.
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~   80 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH   80 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence            589999999999999999      899999999999899999999999999999987665432      25799999999


Q ss_pred             ecCC-cEEECCCCCChhhhccch-hhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHH
Q 020768          144 HPAD-LCFKLPDNVSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV  221 (321)
Q Consensus       144 v~~~-~~~~ip~~~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~  221 (321)
                      +++. +++++|+++++++++.+. ...+++++++.....+|++|||+|+|++|++++|+|+++|+++|++++.+++|.++
T Consensus        81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~  160 (280)
T TIGR03366        81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAGDLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRREL  160 (280)
T ss_pred             ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence            9997 799999999999888665 56788999887777799999999999999999999999999768888889999999


Q ss_pred             HHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCC--CCccccchhhh
Q 020768          222 AKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH--LEMTVPLTPAA  299 (321)
Q Consensus       222 ~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~  299 (321)
                      ++++|++.+++...    ..+.+.++  +.+.++|++||++|.+..++.++++++++|+++.+|...  .+.+++...++
T Consensus       161 a~~~Ga~~~i~~~~----~~~~~~~~--~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~  234 (280)
T TIGR03366       161 ALSFGATALAEPEV----LAERQGGL--QNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVV  234 (280)
T ss_pred             HHHcCCcEecCchh----hHHHHHHH--hCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHH
Confidence            99999998876432    22333333  235689999999998888999999999999999999653  34577888899


Q ss_pred             ccceEEEEeehhHHH
Q 020768          300 ARYLIYSFLFHFFLI  314 (321)
Q Consensus       300 ~k~~~i~g~~~~~~~  314 (321)
                      +|++++.|+..++..
T Consensus       235 ~~~~~i~g~~~~~~~  249 (280)
T TIGR03366       235 RRWLTIRGVHNYEPR  249 (280)
T ss_pred             hCCcEEEecCCCCHH
Confidence            999999998875543

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=3.5e-37  Score=283.81  Aligned_cols=284  Identities=29%  Similarity=0.492  Sum_probs=239.2

Q ss_pred             ceeEEEccCCCeEEEEecCCCC-CCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768           18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (321)
Q Consensus        18 ~~a~~~~~~~~l~~~e~~~p~~-~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~   96 (321)
                      ||++++.+++.+++++.|.|.| +++||+||+.++++|++|+..+.|...    ...|.++|||++|+|+++|++++.++
T Consensus         1 m~~~~~~~~~~~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v~~~~   76 (345)
T cd08287           1 MRATVIHGPGDIRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSP----TRAPAPIGHEFVGVVEEVGSEVTSVK   76 (345)
T ss_pred             CceeEEecCCceeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCC----CCCCcccccceEEEEEEeCCCCCccC
Confidence            7899998888999999999996 999999999999999999988876542    23478999999999999999999999


Q ss_pred             CCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCC--cEEECCCCCChhhhcc------chhhH
Q 020768           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAM------CEPLS  168 (321)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~--~~~~ip~~~~~~~aa~------~~~~~  168 (321)
                      +||+|+..+..+|+.|.+|..+..++|.+..+++ ...+|+|++|+.++.+  .++++|+++++..+..      ...+.
T Consensus        77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~~  155 (345)
T cd08287          77 PGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWG-AFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMG  155 (345)
T ss_pred             CCCEEEeccccCCCCChhhhCcCcccCCCCCccc-CCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHHH
Confidence            9999998667789999999999999999766544 3578999999999974  9999999998732221      13577


Q ss_pred             HHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHH
Q 020768          169 VGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQ  248 (321)
Q Consensus       169 ~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~  248 (321)
                      +++++++.+.+++|++++|+|+|++|++++|+|+++|++.++++++++++.++++++|++.++++..  .++.+.+.++.
T Consensus       156 ~a~~~~~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~--~~~~~~i~~~~  233 (345)
T cd08287         156 TGHHAAVSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERG--EEAVARVRELT  233 (345)
T ss_pred             HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCc--ccHHHHHHHhc
Confidence            8888887788999999999888999999999999999977888988888999999999998887643  34555555442


Q ss_pred             HHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeeh
Q 020768          249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFH  310 (321)
Q Consensus       249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~  310 (321)
                        .+.++|+++|++|++..+..++++++++|+++.+|.......++....+.+++++.+...
T Consensus       234 --~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  293 (345)
T cd08287         234 --GGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRNVGLAGGPA  293 (345)
T ss_pred             --CCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCCCccCHHHHHhcceEEEEecC
Confidence              356799999999987889999999999999999996654455666566789999998654

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.6e-37  Score=280.70  Aligned_cols=269  Identities=27%  Similarity=0.416  Sum_probs=234.3

Q ss_pred             ceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCC
Q 020768           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (321)
Q Consensus        18 ~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~   97 (321)
                      |||+++.+++.++++++|.|.++++||+|||.++++|++|+....|.+      ..|.++|||++|+|+++|++   +++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~------~~~~~~G~e~~G~Vv~~G~~---~~~   71 (319)
T cd08242           1 MKALVLDGGLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYY------PFPGVPGHEFVGIVEEGPEA---ELV   71 (319)
T ss_pred             CeeEEEeCCCcEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCC------CCCCccCceEEEEEEEeCCC---CCC
Confidence            689999888899999999999999999999999999999999887643      25789999999999999988   679


Q ss_pred             CCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHHHHHc
Q 020768           98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA  177 (321)
Q Consensus        98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~~  177 (321)
                      ||+|...+...|++|.+|..+.+.+|......+....+|+|++|+.++.++++++|++++..+++.+.++++++.+++..
T Consensus        72 G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~~~~~~~~~  151 (319)
T cd08242          72 GKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFAEPLAAALEILEQV  151 (319)
T ss_pred             CCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhhhHHHHHHHHHHhc
Confidence            99999998889999999999999999876655432457999999999999999999999998888655666777777788


Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccE
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      +++++++|||+|+|.+|++++|+|+.+|++ +++++.++++.++++++|++.++++...             ..+.++|+
T Consensus       152 ~~~~g~~vlV~g~g~vg~~~~q~a~~~G~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~-------------~~~~~~d~  217 (319)
T cd08242         152 PITPGDKVAVLGDGKLGLLIAQVLALTGPD-VVLVGRHSEKLALARRLGVETVLPDEAE-------------SEGGGFDV  217 (319)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCe-EEEEcCCHHHHHHHHHcCCcEEeCcccc-------------ccCCCCCE
Confidence            999999999998899999999999999995 8888888999999999999887764321             13567999


Q ss_pred             EEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEee
Q 020768          258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLF  309 (321)
Q Consensus       258 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~  309 (321)
                      ++||+|+...++.++++++++|+++..+.......+++..++.|+++++|..
T Consensus       218 vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~  269 (319)
T cd08242         218 VVEATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVGSR  269 (319)
T ss_pred             EEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCccCHHHheecceEEEEEe
Confidence            9999998778899999999999999988665556777777889999999974

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.4e-37  Score=288.01  Aligned_cols=288  Identities=29%  Similarity=0.471  Sum_probs=236.6

Q ss_pred             ceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccC----CcCCCCCcccccceeEEEEEeCCCCC
Q 020768           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCA----DFVVKEPMVIGHECAGVIEKVGSEVK   93 (321)
Q Consensus        18 ~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~----~~~~~~p~~~G~e~vG~V~~vG~~v~   93 (321)
                      +...++.. ..++++++|.|.++++||+|||.++++|++|+..+.+...+    +....+|.++|||++|+|+++|++++
T Consensus        29 ~~~~~~~~-~~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~  107 (384)
T cd08265          29 LGSKVWRY-PELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVK  107 (384)
T ss_pred             ceeEEEeC-CCEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCC
Confidence            34445544 47999999999999999999999999999999887632111    11134578999999999999999999


Q ss_pred             CCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCC-------CChhhhccchh
Q 020768           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN-------VSLEEGAMCEP  166 (321)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~-------~~~~~aa~~~~  166 (321)
                      .|++||+|++.+..+|+.|++|..+++++|..+...+. ..+|+|++|+.+++..++++|++       +++..|++..+
T Consensus       108 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~-~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~~a~~~~~  186 (384)
T cd08265         108 NFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGF-SADGAFAEYIAVNARYAWEINELREIYSEDKAFEAGALVEP  186 (384)
T ss_pred             CCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceeee-cCCCcceeeEEechHHeEECCccccccccCCCHHHhhhhhH
Confidence            99999999999999999999999999999998775543 34799999999999999999986       45666666678


Q ss_pred             hHHHHHHHH-H-cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCC-cccHHHH
Q 020768          167 LSVGLHACR-R-ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTN-LQDIAEE  243 (321)
Q Consensus       167 ~~~a~~~l~-~-~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~-~~~~~~~  243 (321)
                      ++++|+++. . ..+++|++|+|+|+|++|++++|+|+++|++.+++++++++|.++++++|++.++++.+. ..++.+.
T Consensus       187 ~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~  266 (384)
T cd08265         187 TSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEK  266 (384)
T ss_pred             HHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHH
Confidence            889999983 4 689999999999889999999999999999778999889999999999999888875532 2255555


Q ss_pred             HHHHHHHhCCCccEEEEcCCCH-HHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEee
Q 020768          244 VEKIQKAMGTGIDVSFDCAGFN-KTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLF  309 (321)
Q Consensus       244 ~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~  309 (321)
                      +.++.  .+.++|+++|++|++ ..+..++++|+++|+++.+|......++++..+..+..++.|+.
T Consensus       267 v~~~~--~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~  331 (384)
T cd08265         267 VMEVT--KGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQIVGAQ  331 (384)
T ss_pred             HHHhc--CCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCCcccHHHHhhCceEEEEee
Confidence            65543  356899999999973 47789999999999999999665445555566777888888763

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=100.00  E-value=5.3e-37  Score=282.42  Aligned_cols=283  Identities=31%  Similarity=0.517  Sum_probs=237.3

Q ss_pred             ceeEEEccCCCeEEEEecCCCCC-CCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768           18 NMAAWLLGVNTLKIQPFELPSLG-PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (321)
Q Consensus        18 ~~a~~~~~~~~l~~~e~~~p~~~-~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~   96 (321)
                      ||++++.++..++++++|.|+|. ++||+|||.++++|+.|+....+.+.    ..+|.++|+|++|+|+++|++++.++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v~~~~   76 (344)
T cd08284           1 MKAVVFKGPGDVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP----STPGFVLGHEFVGEVVEVGPEVRTLK   76 (344)
T ss_pred             CeeEEEecCCCceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC----CCCCcccccceEEEEEeeCCCccccC
Confidence            68888888889999999999985 99999999999999999988876542    34478999999999999999999999


Q ss_pred             CCCEEEEcCCccCCCCccccCCCCCCCCCccccc---cCCCCCcceeEEEecCC--cEEECCCCCChhhhccc-hhhHHH
Q 020768           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA---TPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMC-EPLSVG  170 (321)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~G~~~~~~~v~~~--~~~~ip~~~~~~~aa~~-~~~~~a  170 (321)
                      +||+|++.+..+|++|.+|..++...|++...++   ....+|+|++|+.++++  .++++|+++++.+++.+ .++.+|
T Consensus        77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ta  156 (344)
T cd08284          77 VGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTG  156 (344)
T ss_pred             CCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHHH
Confidence            9999999988899999999999999998765542   22347999999999965  99999999999888754 588899


Q ss_pred             HHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHH
Q 020768          171 LHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA  250 (321)
Q Consensus       171 ~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~  250 (321)
                      |++++...+.+|++|||+|+|.+|++++|+|+.+|+.+++++++++++.++++++|+. .++.+  ..++.+.+.++.  
T Consensus       157 ~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~--~~~~~~~l~~~~--  231 (344)
T cd08284         157 YFGAKRAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFE--DAEPVERVREAT--  231 (344)
T ss_pred             HhhhHhcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecC--CcCHHHHHHHHh--
Confidence            9998778889999999998899999999999999975688888888999999999975 34432  245555555543  


Q ss_pred             hCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-CccccchhhhccceEEEEee
Q 020768          251 MGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARYLIYSFLF  309 (321)
Q Consensus       251 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~  309 (321)
                      .+.++|++||++|++..+...+++++++|+++.+|.... ....+....+.+++++.+..
T Consensus       232 ~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  291 (344)
T cd08284         232 EGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGR  291 (344)
T ss_pred             CCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEec
Confidence            356899999999987788999999999999999997653 33455555677889988753

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=8.8e-38  Score=265.92  Aligned_cols=275  Identities=21%  Similarity=0.245  Sum_probs=228.9

Q ss_pred             cccccchhhceeEEEcc---C-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEE
Q 020768            9 GEKEDGEEVNMAAWLLG---V-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV   84 (321)
Q Consensus         9 ~~~~~~~~~~~a~~~~~---~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~   84 (321)
                      .+...++...|++++..   | ..+++++.+.|++..++|+||.+|+.|||+|+..++|.++..  +++|.+-|.|++|+
T Consensus        11 ssa~q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvr--P~~PAVgGnEGv~e   88 (354)
T KOG0025|consen   11 SSASQMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVR--PELPAVGGNEGVGE   88 (354)
T ss_pred             ccccccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCC--CCCCcccCCcceEE
Confidence            45556777788888873   2 568999999999988899999999999999999999987644  67899999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc
Q 020768           85 IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC  164 (321)
Q Consensus        85 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~  164 (321)
                      |+.+|+++++|++||+|+...                           ...|+|++|.+.+++.++++++.++++.||++
T Consensus        89 Vv~vGs~vkgfk~Gd~VIp~~---------------------------a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~  141 (354)
T KOG0025|consen   89 VVAVGSNVKGFKPGDWVIPLS---------------------------ANLGTWRTEAVFSESDLIKVDKDIPLASAATL  141 (354)
T ss_pred             EEEecCCcCccCCCCeEeecC---------------------------CCCccceeeEeecccceEEcCCcCChhhhhee
Confidence            999999999999999999863                           35699999999999999999999999999977


Q ss_pred             h-hhHHHHHHHH-HcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChh---HHHHHHHcCCCeEEecCCCcc
Q 020768          165 E-PLSVGLHACR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY---RLSVAKELGADNIVKVSTNLQ  238 (321)
Q Consensus       165 ~-~~~~a~~~l~-~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~---~~~~~~~~g~~~vi~~~~~~~  238 (321)
                      . .-+|||..++ ...+.+||+|+-.|+ +++|++.+|+|+++|++.+-++..+++   -.+.++.+|+++++..++...
T Consensus       142 ~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~  221 (354)
T KOG0025|consen  142 SVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRD  221 (354)
T ss_pred             ccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcc
Confidence            6 6678999985 488999999999999 999999999999999987777765543   344567899999986432211


Q ss_pred             cHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEc-CCCCCccccchhhhccceEEEEeehhHHHhhc
Q 020768          239 DIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG-MGHLEMTVPLTPAAARYLIYSFLFHFFLIVLG  317 (321)
Q Consensus       239 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g-~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~  317 (321)
                         ...... ......+.+.|||+|+ .....+.+.|.+||+++.+| |+..+.+++...+++|+++++|+++-.|.--+
T Consensus       222 ---~~~~k~-~~~~~~prLalNcVGG-ksa~~iar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~  296 (354)
T KOG0025|consen  222 ---RKMKKF-KGDNPRPRLALNCVGG-KSATEIARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEH  296 (354)
T ss_pred             ---hhhhhh-hccCCCceEEEeccCc-hhHHHHHHHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhcc
Confidence               111111 1124568999999998 56678899999999999998 56678999999999999999999998776433

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=5.2e-37  Score=282.68  Aligned_cols=285  Identities=34%  Similarity=0.553  Sum_probs=238.1

Q ss_pred             ceeEEEccCCCeEEEEecCCCC-CCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768           18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (321)
Q Consensus        18 ~~a~~~~~~~~l~~~e~~~p~~-~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~   96 (321)
                      ||++++.+++.+++.++|.|.| .++||+|||.++++|+.|+..+.+.+..   .++|.++|+|++|+|+++|+++++++
T Consensus         1 ~ka~~~~~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~vG~~v~~~~   77 (347)
T cd05278           1 MKALVYLGPGKIGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPG---AKHGMILGHEFVGEVVEVGSDVKRLK   77 (347)
T ss_pred             CceEEEecCCceEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCC---CCCCceeccceEEEEEEECCCccccC
Confidence            6888988888899999999999 9999999999999999999988776533   45588999999999999999999999


Q ss_pred             CCCEEEEcCCccCCCCccccCCCCCCCCCcccc--ccCCCCCcceeEEEecCC--cEEECCCCCChhhhccch-hhHHHH
Q 020768           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMCE-PLSVGL  171 (321)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~G~~~~~~~v~~~--~~~~ip~~~~~~~aa~~~-~~~~a~  171 (321)
                      +||+|+..+..+|+.|.+|..+...+|.+....  .+...+|+|++|+.++++  +++++|+++++.+++.++ ++.+||
T Consensus        78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta~  157 (347)
T cd05278          78 PGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGF  157 (347)
T ss_pred             CCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhhee
Confidence            999999999999999999999999999875432  122357999999999987  999999999999988664 788899


Q ss_pred             HHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768          172 HACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       172 ~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      +++...++++|++|||.|+|++|++++|+|+.+|...++++++++++.++++++|++.++++++  .++.+.++.+.  .
T Consensus       158 ~~~~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~--~~~~~~i~~~~--~  233 (347)
T cd05278         158 HGAELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKN--GDIVEQILELT--G  233 (347)
T ss_pred             ehhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCc--chHHHHHHHHc--C
Confidence            9887788999999999887999999999999999756888888899999999999988887543  34555555442  3


Q ss_pred             CCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccch-hhhccceEEEEee
Q 020768          252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLT-PAAARYLIYSFLF  309 (321)
Q Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~k~~~i~g~~  309 (321)
                      +.++|++||++|+...+...+++|+++|+++.+|........... ..+.+++++.+..
T Consensus       234 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  292 (347)
T cd05278         234 GRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGL  292 (347)
T ss_pred             CCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeec
Confidence            467999999999866889999999999999999965443222122 2346888888764

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=100.00  E-value=6.9e-37  Score=281.18  Aligned_cols=282  Identities=39%  Similarity=0.649  Sum_probs=232.7

Q ss_pred             EEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 020768           22 WLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRV  101 (321)
Q Consensus        22 ~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd~V  101 (321)
                      ++++.+.+++++.|.|.++++||+|||.++++|++|+..............+|.++|+|++|+|+++|++++.|++||+|
T Consensus         2 ~~~~~~~~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V   81 (339)
T cd08232           2 VIHAAGDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRV   81 (339)
T ss_pred             eeccCCceEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEE
Confidence            57788899999999999999999999999999999988764221111113457899999999999999999999999999


Q ss_pred             EEcCCccCCCCccccCCCCCCCCCcccccc----CCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHHHHHc
Q 020768          102 ALEPGISCWRCDHCKGGRYNLCPEMKFFAT----PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA  177 (321)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~~  177 (321)
                      +..+..+|++|.+|..+..++|.++.+.+.    ...+|+|++|+.++.+.++++|+++++.+|+.+.+++++|+++...
T Consensus        82 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~~~~~~~a~~~l~~~  161 (339)
T cd08232          82 AVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAALAEPLAVALHAVNRA  161 (339)
T ss_pred             EEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhhcchHHHHHHHHHhc
Confidence            999988999999999999999998654432    1247999999999999999999999999988766888899988664


Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccE
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      ...++++|||.|+|++|++++|+|+++|...++++++++++.++++++|++.+++++..  +    +.++.. ...++|+
T Consensus       162 ~~~~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~--~----~~~~~~-~~~~vd~  234 (339)
T cd08232         162 GDLAGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARD--P----LAAYAA-DKGDFDV  234 (339)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCch--h----hhhhhc-cCCCccE
Confidence            44499999998889999999999999998668888888888899999999888875432  2    222211 2356999


Q ss_pred             EEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeeh
Q 020768          258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFH  310 (321)
Q Consensus       258 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~  310 (321)
                      ++|+.|+...++..+++|+++|+++.+|........++..++.+++++.+...
T Consensus       235 vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  287 (339)
T cd08232         235 VFEASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLRGSFR  287 (339)
T ss_pred             EEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccCcHHHHhhcceEEEEEec
Confidence            99999976788999999999999999986543344555666779999988763

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=7.6e-37  Score=277.25  Aligned_cols=289  Identities=37%  Similarity=0.595  Sum_probs=242.0

Q ss_pred             ceeEEEccC--CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCC
Q 020768           18 NMAAWLLGV--NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (321)
Q Consensus        18 ~~a~~~~~~--~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~   95 (321)
                      ||+++..++  ..+++++++.|.+.++||+|||.++++|+.|+....+.+..   ...|.++|+|++|+|+++|++++.|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~~   77 (306)
T cd08258           1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDP---VETPVVLGHEFSGTIVEVGPDVEGW   77 (306)
T ss_pred             CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCc---CCCCeeeccceEEEEEEECCCcCcC
Confidence            577887743  46999999999999999999999999999999888765311   3457899999999999999999999


Q ss_pred             CCCCEEEEcCC-ccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHHH
Q 020768           96 VPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHAC  174 (321)
Q Consensus        96 ~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l  174 (321)
                      ++||+|+..+. .+|++|++|..+..+.|++...++ ....|+|++|+.++.+.++++|+++++.+++...++.++|+++
T Consensus        78 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~a~~~l  156 (306)
T cd08258          78 KVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIG-TQADGGFAEYVLVPEESLHELPENLSLEAAALTEPLAVAVHAV  156 (306)
T ss_pred             CCCCEEEEccCcCCCCCCcchhCcCcccCCCCceee-ecCCCceEEEEEcchHHeEECcCCCCHHHHHhhchHHHHHHHH
Confidence            99999999874 689999999999999998765443 3457999999999999999999999999888666888899887


Q ss_pred             -HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEE--eCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768          175 -RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIV--DVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       175 -~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v--~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                       ..+.++++++|||.|+|++|++++|+|+++|++ ++++  ++++++.++++++|++.+ ++.  ..++.+.+..+.  .
T Consensus       157 ~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~~-v~~~~~~~~~~~~~~~~~~g~~~~-~~~--~~~~~~~l~~~~--~  230 (306)
T cd08258         157 AERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGAT-VVVVGTEKDEVRLDVAKELGADAV-NGG--EEDLAELVNEIT--D  230 (306)
T ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCE-EEEECCCCCHHHHHHHHHhCCccc-CCC--cCCHHHHHHHHc--C
Confidence             457889999999987799999999999999995 6555  345667888899999876 543  356666665543  3


Q ss_pred             CCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCC-CCccccchhhhccceEEEEeehhHHHhh
Q 020768          252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-LEMTVPLTPAAARYLIYSFLFHFFLIVL  316 (321)
Q Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~k~~~i~g~~~~~~~~~  316 (321)
                      +.++|++||++|+...+...++.|+++|+++.+|... .+..+++..+++|+++|+|+++++...+
T Consensus       231 ~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~  296 (306)
T cd08258         231 GDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRSSTPASW  296 (306)
T ss_pred             CCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCchHhH
Confidence            5679999999987788899999999999999999765 3467788888899999999999876654

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=100.00  E-value=1.6e-36  Score=279.05  Aligned_cols=285  Identities=36%  Similarity=0.614  Sum_probs=243.9

Q ss_pred             ceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCC
Q 020768           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (321)
Q Consensus        18 ~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~   97 (321)
                      ||++++.+++.+.+++.+.|.+.+++|+|||.++++|+.|+..+.+...   ....|.++|+|++|+|+++|++++.+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~---~~~~~~~~g~~~~G~V~~~G~~v~~~~~   77 (343)
T cd08235           1 MKAAVLHGPNDVRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHT---DLKPPRILGHEIAGEIVEVGDGVTGFKV   77 (343)
T ss_pred             CeEEEEecCCceEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCc---cCCCCcccccceEEEEEeeCCCCCCCCC
Confidence            6889998888899999999999999999999999999999998876542   1344779999999999999999999999


Q ss_pred             CCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCc-----EEECCCCCChhhhccchhhHHHHH
Q 020768           98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL-----CFKLPDNVSLEEGAMCEPLSVGLH  172 (321)
Q Consensus        98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~-----~~~ip~~~~~~~aa~~~~~~~a~~  172 (321)
                      ||+|+..+...|++|++|..++.++|....+.+. ...|+|++|+.+++++     ++++|+++++.+|+.+.++.+|++
T Consensus        78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~  156 (343)
T cd08235          78 GDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGN-LYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALVEPLACCIN  156 (343)
T ss_pred             CCEEEEccCCCCCCChHHHCcCcccCCCcceecc-CCCCcceeeEEecccccccccEEECCCCCCHHHHHhhhHHHHHHH
Confidence            9999999999999999999999999988765543 4679999999999998     999999999999887678888999


Q ss_pred             HHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhC
Q 020768          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       173 ~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~  252 (321)
                      +++..++++|++|+|+|+|++|++++|+|+..|.+.++++++++++.++++++|++.++++++  .++.+.++++.  .+
T Consensus       157 ~l~~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~--~~~~~~i~~~~--~~  232 (343)
T cd08235         157 AQRKAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAE--EDLVEKVRELT--DG  232 (343)
T ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCCc--cCHHHHHHHHh--CC
Confidence            987778999999999988999999999999999965888888999999989999988877543  45666555542  35


Q ss_pred             CCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC--CccccchhhhccceEEEEeeh
Q 020768          253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL--EMTVPLTPAAARYLIYSFLFH  310 (321)
Q Consensus       253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~k~~~i~g~~~  310 (321)
                      .++|++|||+++...+...+++++++|+++.+|....  ...++...+..+++++.++..
T Consensus       233 ~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  292 (343)
T cd08235         233 RGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYA  292 (343)
T ss_pred             cCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEec
Confidence            6799999999987788999999999999999986543  245555667789999988753

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=1.4e-36  Score=279.00  Aligned_cols=282  Identities=27%  Similarity=0.408  Sum_probs=236.2

Q ss_pred             ceeEEEccCCCeE-EEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768           18 NMAAWLLGVNTLK-IQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (321)
Q Consensus        18 ~~a~~~~~~~~l~-~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~   96 (321)
                      ||++++.+++... ++++|.|.++++||+|||.++++|++|+..+.+..+    ...|.++|||++|+|+++|++++.|+
T Consensus         1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~~G~~v~~~~   76 (338)
T PRK09422          1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFG----DKTGRILGHEGIGIVKEVGPGVTSLK   76 (338)
T ss_pred             CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCC----CCCCccCCcccceEEEEECCCCccCC
Confidence            7899998766655 899999999999999999999999999988876532    22367899999999999999999999


Q ss_pred             CCCEEEEcC-CccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHHH
Q 020768           97 PGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC  174 (321)
Q Consensus        97 ~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l  174 (321)
                      +||+|++.+ ..+|+.|.+|..+..++|.+....+ ...+|+|++|+.++.++++++|+++++.+++.+. .+.++|+++
T Consensus        77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~  155 (338)
T PRK09422         77 VGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAG-YTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI  155 (338)
T ss_pred             CCCEEEEccCCCCCCCChhhcCCCcccCCCccccC-ccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHH
Confidence            999999865 4589999999999999998776443 2457999999999999999999999999888664 668889998


Q ss_pred             HHcCCCCCCEEEEEcCChhHHHHHHHHHH-cCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCC
Q 020768          175 RRANIGPETNVLIMGAGPIGLVTMLGARA-FGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~-~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~  253 (321)
                      +.+.+++|++|||+|+|++|++++|+|+. .|. .++++++++++.++++++|++.+++... ..++.+.+++.   .+ 
T Consensus       156 ~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~v~~~---~~-  229 (338)
T PRK09422        156 KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSKR-VEDVAKIIQEK---TG-  229 (338)
T ss_pred             HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEecccc-cccHHHHHHHh---cC-
Confidence            77899999999999999999999999998 498 6888899999999999999988877532 13444444443   23 


Q ss_pred             CccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeeh
Q 020768          254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFH  310 (321)
Q Consensus       254 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~  310 (321)
                      ++|+++++.++...+..++++++++|+++.+|.......++...++.+++++.|++.
T Consensus       230 ~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  286 (338)
T PRK09422        230 GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVGSLV  286 (338)
T ss_pred             CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCCceecHHHHhhcCcEEEEecC
Confidence            689666556667899999999999999999997655556677778889999999763

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.3e-36  Score=277.90  Aligned_cols=279  Identities=30%  Similarity=0.467  Sum_probs=226.4

Q ss_pred             ceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhcccc--------CCcCCCCCcccccceeEEEEEeC
Q 020768           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRC--------ADFVVKEPMVIGHECAGVIEKVG   89 (321)
Q Consensus        18 ~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~--------~~~~~~~p~~~G~e~vG~V~~vG   89 (321)
                      ||++++.++ .+++++++.|+++++||+|||.++++|+.|++...|...        ......+|.++|+|++|+|+++|
T Consensus         1 m~a~~~~~~-~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG   79 (341)
T cd08262           1 MRAAVFRDG-PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDYG   79 (341)
T ss_pred             CceEEEeCC-ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEeC
Confidence            688888766 899999999999999999999999999999998877321        01113357899999999999999


Q ss_pred             CCCCC-CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhH
Q 020768           90 SEVKT-LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS  168 (321)
Q Consensus        90 ~~v~~-~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~  168 (321)
                      ++++. |++||+|+..+..+|++|..|..+..           ....|+|++|+.++.+.++++|+++++.++++..+++
T Consensus        80 ~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~-----------~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~~~~~~~  148 (341)
T cd08262          80 PGTERKLKVGTRVTSLPLLLCGQGASCGIGLS-----------PEAPGGYAEYMLLSEALLLRVPDGLSMEDAALTEPLA  148 (341)
T ss_pred             CCCcCCCCCCCEEEecCCcCCCCChhhhCCCC-----------cCCCCceeeeEEechHHeEECCCCCCHHHhhhhhhHH
Confidence            99987 99999999999999999999943321           1246999999999999999999999999888666888


Q ss_pred             HHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcc--cHHHHHHH
Q 020768          169 VGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQ--DIAEEVEK  246 (321)
Q Consensus       169 ~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~--~~~~~~~~  246 (321)
                      ++|++++.+++++|++|||+|+|++|.+++|+|+.+|++.++++++++++.++++++|++.+++++....  ++. .+..
T Consensus       149 ~a~~~~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~-~~~~  227 (341)
T cd08262         149 VGLHAVRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWA-AELA  227 (341)
T ss_pred             HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHH-HHHH
Confidence            8998887789999999999988999999999999999977888888999999999999988887543211  111 1222


Q ss_pred             HHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehh
Q 020768          247 IQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF  311 (321)
Q Consensus       247 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~  311 (321)
                      .  ..+.++|++||++|+...+..++++++++|+++.+|.......+.......+++++.++..+
T Consensus       228 ~--~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (341)
T cd08262         228 R--AGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDNIEPALAIRKELTLQFSLGY  290 (341)
T ss_pred             H--hCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCccCHHHHhhcceEEEEEecc
Confidence            2  23567999999999855788899999999999999966433333333335688888876543

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=4.8e-36  Score=275.42  Aligned_cols=281  Identities=37%  Similarity=0.611  Sum_probs=238.7

Q ss_pred             ceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCC
Q 020768           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (321)
Q Consensus        18 ~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~   97 (321)
                      |||++++.++.+++.++|.|.++++|++|||.++++|+.|+....+....   ..+|.++|+|++|+|+++|++++.|++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~---~~~~~~~g~e~~G~V~~~G~~v~~~~~   77 (337)
T cd08261           1 MKALVCEKPGRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPF---ASYPRILGHELSGEVVEVGEGVAGLKV   77 (337)
T ss_pred             CeEEEEeCCCceEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCc---CCCCcccccccEEEEEEeCCCCCCCCC
Confidence            68888888888999999999999999999999999999999988765422   244788999999999999999999999


Q ss_pred             CCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHHHHHc
Q 020768           98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA  177 (321)
Q Consensus        98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~~  177 (321)
                      ||+|+..+..+|+.|..|+.+..++|......+ ....|+|++|+.++++ ++++|++++++++++++++.+++++++..
T Consensus        78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~~~~~~a~~~~~~~  155 (337)
T cd08261          78 GDRVVVDPYISCGECYACRKGRPNCCENLQVLG-VHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALVEPLAIGAHAVRRA  155 (337)
T ss_pred             CCEEEECCCCCCCCChhhhCcCcccCCCCCeee-ecCCCcceeEEEechh-eEECCCCCCHHHhhhhchHHHHHHHHHhc
Confidence            999999888899999999999999995433222 1246999999999999 99999999999988777778888888778


Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccE
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      .+.+|++|||+|+|.+|++++|+|+.+|. .++++.+++++.++++++|+++++++..  .++.+.+.++.  .+.++|+
T Consensus       156 ~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~--~~~~~~l~~~~--~~~~vd~  230 (337)
T cd08261         156 GVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGD--EDVAARLRELT--DGEGADV  230 (337)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCcc--cCHHHHHHHHh--CCCCCCE
Confidence            89999999999889999999999999999 5788888899999999999999887654  35666665542  3567999


Q ss_pred             EEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEe
Q 020768          258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFL  308 (321)
Q Consensus       258 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~  308 (321)
                      +||++|+...+..++++|+++|+++.+|.......++...+..+++++.+.
T Consensus       231 vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~  281 (337)
T cd08261         231 VIDATGNPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKELTILGS  281 (337)
T ss_pred             EEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCCCccCHHHHHhCCCEEEEe
Confidence            999998877889999999999999999866544455655677788888775

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=1.9e-36  Score=284.35  Aligned_cols=292  Identities=22%  Similarity=0.239  Sum_probs=237.8

Q ss_pred             chhhceeEEEcc-----C-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCC------c-CCCCC-ccccc
Q 020768           14 GEEVNMAAWLLG-----V-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCAD------F-VVKEP-MVIGH   79 (321)
Q Consensus        14 ~~~~~~a~~~~~-----~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~------~-~~~~p-~~~G~   79 (321)
                      ++.+|||.++..     + +.+++.++|.|.|+++|++||+.++++|+.|+....+.....      . ....| .++||
T Consensus         4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~   83 (398)
T TIGR01751         4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS   83 (398)
T ss_pred             cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence            467799999942     2 469999999999999999999999999999987665432100      0 01223 37999


Q ss_pred             ceeEEEEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChh
Q 020768           80 ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLE  159 (321)
Q Consensus        80 e~vG~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~  159 (321)
                      |++|+|+++|++++.|++||+|++.+...|++|++|+.+++++|.....++....+|+|+||+.+++.+++++|+++++.
T Consensus        84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~  163 (398)
T TIGR01751        84 DASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWE  163 (398)
T ss_pred             ceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHH
Confidence            99999999999999999999999999999999999999999999876655544568999999999999999999999999


Q ss_pred             hhccch-hhHHHHHHHH---HcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecC
Q 020768          160 EGAMCE-PLSVGLHACR---RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS  234 (321)
Q Consensus       160 ~aa~~~-~~~~a~~~l~---~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~  234 (321)
                      +++.+. +..++|+++.   .+.+++|++++|+|+ |++|++++|+|+++|+ .+++++.++++.++++++|++.+++.+
T Consensus       164 ~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~~~~~~~~~~~~~~g~~~~v~~~  242 (398)
T TIGR01751       164 EAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAVVSSPEKAEYCRELGAEAVIDRN  242 (398)
T ss_pred             HHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCCEEecCC
Confidence            887554 7788898874   367899999999998 9999999999999999 467777888999999999999998864


Q ss_pred             CCc--------------------ccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-Cccc
Q 020768          235 TNL--------------------QDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTV  293 (321)
Q Consensus       235 ~~~--------------------~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~  293 (321)
                      ..+                    ..+.+.+.++  ..++++|++|||+|. ..+...+++++++|+++.+|.... ...+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  319 (398)
T TIGR01751       243 DFGHWGRLPDLNTQAPKEWTKSFKRFGKRIREL--TGGEDPDIVFEHPGR-ATFPTSVFVCRRGGMVVICGGTTGYNHDY  319 (398)
T ss_pred             CcchhhccccccccccchhhhcchhHHHHHHHH--cCCCCceEEEECCcH-HHHHHHHHhhccCCEEEEEccccCCCCCc
Confidence            321                    0122233332  235679999999996 678999999999999999997644 2466


Q ss_pred             cchhhhccceEEEEee
Q 020768          294 PLTPAAARYLIYSFLF  309 (321)
Q Consensus       294 ~~~~~~~k~~~i~g~~  309 (321)
                      +...++.++.++.|+.
T Consensus       320 ~~~~~~~~~~~~~~~~  335 (398)
T TIGR01751       320 DNRYLWMRQKRIQGSH  335 (398)
T ss_pred             CHHHHhhcccEEEccc
Confidence            6677788899999886

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=4.9e-36  Score=275.96  Aligned_cols=283  Identities=39%  Similarity=0.647  Sum_probs=240.4

Q ss_pred             ceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCC
Q 020768           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (321)
Q Consensus        18 ~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~   97 (321)
                      |||+++.+.+.+.+++.+.|+++++||+||+.++++|+.|+..+.+...    ...|.++|+|++|+|+++|++++.|++
T Consensus         1 ~~a~~~~~~~~l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~----~~~~~~~g~~~~G~V~~~g~~v~~~~~   76 (343)
T cd08236           1 MKALVLTGPGDLRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA----YHPPLVLGHEFSGTVEEVGSGVDDLAV   76 (343)
T ss_pred             CeeEEEecCCceeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCC----CCCCcccCcceEEEEEEECCCCCcCCC
Confidence            7899998878899999999999999999999999999999988776431    345789999999999999999999999


Q ss_pred             CCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHHHHHc
Q 020768           98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA  177 (321)
Q Consensus        98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~~  177 (321)
                      ||+|+..+...|++|.+|..++.+.|+.....+. ...|+|++|+.+++++++++|+++++.+++.++++.++|+++...
T Consensus        77 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~~~~~ta~~~l~~~  155 (343)
T cd08236          77 GDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGS-RRDGAFAEYVSVPARNLIKIPDHVDYEEAAMIEPAAVALHAVRLA  155 (343)
T ss_pred             CCEEEEcCCCCCCCChhHHCcChhhCCCcceEec-ccCCcccceEEechHHeEECcCCCCHHHHHhcchHHHHHHHHHhc
Confidence            9999999888999999999999999987655443 367999999999999999999999999988777788999998878


Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccE
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      .++++++|+|+|+|.+|++++|+|+.+|.+.++++++++++.++++++|++.+++.+.  .. .+.+....  .+.++|+
T Consensus       156 ~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~--~~-~~~~~~~~--~~~~~d~  230 (343)
T cd08236         156 GITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE--ED-VEKVRELT--EGRGADL  230 (343)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcc--cc-HHHHHHHh--CCCCCCE
Confidence            8999999999988999999999999999965888888888999999999988887543  22 44444432  3567999


Q ss_pred             EEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCcc---ccchhhhccceEEEEeeh
Q 020768          258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMT---VPLTPAAARYLIYSFLFH  310 (321)
Q Consensus       258 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~---~~~~~~~~k~~~i~g~~~  310 (321)
                      +|||+|+...+..++++|+++|+++.+|.......   .++..++.+++++.|+..
T Consensus       231 vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (343)
T cd08236         231 VIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWN  286 (343)
T ss_pred             EEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEee
Confidence            99999887788999999999999999996644322   233445678999988764

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=3e-36  Score=278.19  Aligned_cols=289  Identities=30%  Similarity=0.414  Sum_probs=240.2

Q ss_pred             ceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccC---------CcCCCCCcccccceeEEEEE
Q 020768           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCA---------DFVVKEPMVIGHECAGVIEK   87 (321)
Q Consensus        18 ~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~---------~~~~~~p~~~G~e~vG~V~~   87 (321)
                      |||+++..+ ..++++++|.|+++++||+|||.++++|++|+..+.+....         .....+|.++|+|++|+|++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~   80 (350)
T cd08240           1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA   80 (350)
T ss_pred             CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence            788888754 45899999999999999999999999999999988764310         00124567899999999999


Q ss_pred             eCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hh
Q 020768           88 VGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EP  166 (321)
Q Consensus        88 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~  166 (321)
                      +|++++.+++||+|+..+...|++|..|..+..++|.+..+.+. ...|++++|+.++.+.++++|+++++.+++.+ ..
T Consensus        81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~~  159 (350)
T cd08240          81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGI-FQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACS  159 (350)
T ss_pred             eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceee-eccCcceeeEEecHHHeeeCCCCCCHHHeehhhch
Confidence            99999999999999999999999999999999999988765543 36799999999999999999999999998855 47


Q ss_pred             hHHHHHHHHH-cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHH
Q 020768          167 LSVGLHACRR-ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVE  245 (321)
Q Consensus       167 ~~~a~~~l~~-~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~  245 (321)
                      +.+||++++. ..++++++|+|+|+|++|++++|+|+++|++.|+++++++++.+.++++|++.+++.++  .++.+.+.
T Consensus       160 ~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~  237 (350)
T cd08240         160 GLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGSD--PDAAKRII  237 (350)
T ss_pred             hhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecCCC--ccHHHHHH
Confidence            7889999865 45568999999988999999999999999977888889999999999999987776432  34444444


Q ss_pred             HHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehhH
Q 020768          246 KIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFF  312 (321)
Q Consensus       246 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~  312 (321)
                      +..   ++++|++||++|.......++++|+++|+++.+|.......++...+.++++++.++....
T Consensus       238 ~~~---~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~  301 (350)
T cd08240         238 KAA---GGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYVGS  301 (350)
T ss_pred             HHh---CCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCcccHHHHhhcCcEEEEcccCC
Confidence            432   2389999999997778999999999999999999765544555556667999999976543

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd05281 TDH Threonine dehydrogenase

Probab=100.00  E-value=1.3e-35  Score=273.15  Aligned_cols=285  Identities=31%  Similarity=0.524  Sum_probs=234.4

Q ss_pred             ceeEEEccCC-CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768           18 NMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (321)
Q Consensus        18 ~~a~~~~~~~-~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~   96 (321)
                      ||++++..++ .+++.+.|.|.|+++|++|||.++++|+.|+..+.+..........|.++|+|++|+|+.+|++++.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~   80 (341)
T cd05281           1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK   80 (341)
T ss_pred             CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence            6888887554 699999999999999999999999999999887544211111134577899999999999999999999


Q ss_pred             CCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHHHHH
Q 020768           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRR  176 (321)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~  176 (321)
                      +||+|+..+..+|+.|+.|..+++++|+..++.+. ...|+|++|++++++.++++|++++.+.+++..++.++++++. 
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~v~v~~~~~~~lP~~~~~~~a~~~~~~~~a~~~~~-  158 (341)
T cd05281          81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGV-DTDGCFAEYVVVPEENLWKNDKDIPPEIASIQEPLGNAVHTVL-  158 (341)
T ss_pred             CCCEEEECCccCCCCChHHHCcCcccCcccceEec-cCCCcceEEEEechHHcEECcCCCCHHHhhhhhHHHHHHHHHH-
Confidence            99999999888999999999999999987665553 4579999999999999999999999876766678888888765 


Q ss_pred             cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      ...++|++|||+|+|++|++++|+|+++|.+++++++++++|.++++++|++.+++...  .++. .+.++.  .++++|
T Consensus       159 ~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~-~~~~~~--~~~~vd  233 (341)
T cd05281         159 AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPRE--EDVV-EVKSVT--DGTGVD  233 (341)
T ss_pred             hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCccc--ccHH-HHHHHc--CCCCCC
Confidence            45578999999888999999999999999866788888899999999999988776432  3444 454442  356899


Q ss_pred             EEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccch-hhhccceEEEEee
Q 020768          257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLT-PAAARYLIYSFLF  309 (321)
Q Consensus       257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~k~~~i~g~~  309 (321)
                      ++|||+|+...+..++++|+++|+++.+|.......+++. .+..+++++.++.
T Consensus       234 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  287 (341)
T cd05281         234 VVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGIT  287 (341)
T ss_pred             EEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcccccchhhhccceEEEEEe
Confidence            9999999877889999999999999999866544444443 3677888888765

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=1.2e-35  Score=275.64  Aligned_cols=284  Identities=34%  Similarity=0.504  Sum_probs=237.7

Q ss_pred             ceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (321)
Q Consensus        18 ~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~   96 (321)
                      |||+++..+ ..++++++|.|.++++||+|||.++++|+.|+..+.+...    ..+|.++|+|++|+|+++|++++.|+
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v~~~~   76 (363)
T cd08279           1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP----APLPAVLGHEGAGVVEEVGPGVTGVK   76 (363)
T ss_pred             CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC----CCCCccccccceEEEEEeCCCccccC
Confidence            789999865 6789999999999999999999999999999998876542    34578999999999999999999999


Q ss_pred             CCCEEEEcCCccCCCCccccCCCCCCCCCcccc---------------cc----CCCCCcceeEEEecCCcEEECCCCCC
Q 020768           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---------------AT----PPVHGSLANQVVHPADLCFKLPDNVS  157 (321)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~----~~~~G~~~~~~~v~~~~~~~ip~~~~  157 (321)
                      +||+|+..+..+|++|.+|..+..++|.+...+               +.    ....|+|++|+.++++.++++|++++
T Consensus        77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~  156 (363)
T cd08279          77 PGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIP  156 (363)
T ss_pred             CCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCC
Confidence            999999999999999999999999999754210               00    02358999999999999999999999


Q ss_pred             hhhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCC
Q 020768          158 LEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST  235 (321)
Q Consensus       158 ~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~  235 (321)
                      +.+++.+. .+.++|.++ +...++++++|||+|+|++|++++++|+.+|+++++++++++++.++++++|++.+++.+.
T Consensus       157 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~  236 (363)
T cd08279         157 LDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASE  236 (363)
T ss_pred             hHHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCC
Confidence            99988665 567888776 5588999999999977999999999999999966888889999999999999988876543


Q ss_pred             CcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC--CccccchhhhccceEEEEee
Q 020768          236 NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL--EMTVPLTPAAARYLIYSFLF  309 (321)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~k~~~i~g~~  309 (321)
                        .++...+.++.  .+.++|++||++++...+..++++++++|+++.+|....  ...++...+..++.++.+++
T Consensus       237 --~~~~~~l~~~~--~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (363)
T cd08279         237 --DDAVEAVRDLT--DGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSL  308 (363)
T ss_pred             --ccHHHHHHHHc--CCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEEE
Confidence              35555555442  256799999999977788999999999999999986542  44566666777888877763

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=8.8e-36  Score=273.82  Aligned_cols=282  Identities=26%  Similarity=0.378  Sum_probs=235.7

Q ss_pred             eeEEEcc-CCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCC
Q 020768           19 MAAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (321)
Q Consensus        19 ~a~~~~~-~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~   97 (321)
                      |+.+.+. ...+++++++.|.|+++|++|||.++++|++|++.+.+....   ..+|.++|||++|+|+++|++++.|++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~---~~~p~~~g~e~~G~V~~vG~~v~~~~~   77 (337)
T cd05283           1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGP---TKYPLVPGHEIVGIVVAVGSKVTKFKV   77 (337)
T ss_pred             CceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCC---CCCCcccCcceeeEEEEECCCCcccCC
Confidence            3455554 368999999999999999999999999999999988875421   356889999999999999999999999


Q ss_pred             CCEEEEcC-CccCCCCccccCCCCCCCCCccccc------cCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHH
Q 020768           98 GDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSV  169 (321)
Q Consensus        98 Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~  169 (321)
                      ||+|++.+ ...|++|.+|..+..++|+.+.+.+      +...+|+|+||+.++.+.++++|+++++.+++.+. ...+
T Consensus        78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~t  157 (337)
T cd05283          78 GDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGIT  157 (337)
T ss_pred             CCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHH
Confidence            99998543 4489999999999999998876542      22357999999999999999999999999887554 6678


Q ss_pred             HHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHH
Q 020768          170 GLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       170 a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      ||++++...+++|++++|.|+|++|++++++|+.+|+ .++++++++++.++++++|++.+++...  .++.   +.   
T Consensus       158 a~~~~~~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~--~~~~---~~---  228 (337)
T cd05283         158 VYSPLKRNGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKD--PEAM---KK---  228 (337)
T ss_pred             HHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcc--hhhh---hh---
Confidence            8988877778999999998889999999999999999 6888889899999999999988876432  1211   11   


Q ss_pred             HhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehhHH
Q 020768          250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFL  313 (321)
Q Consensus       250 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~  313 (321)
                       .+.++|+++||+|+...+..++++++++|+++.+|......++++..++.+++++.|+.....
T Consensus       229 -~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~  291 (337)
T cd05283         229 -AAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAGSLIGGR  291 (337)
T ss_pred             -ccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCCCccCHHHHhcCceEEEEecccCH
Confidence             256799999999986568899999999999999997655556777777889999999876443

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=7.6e-36  Score=272.76  Aligned_cols=260  Identities=22%  Similarity=0.273  Sum_probs=212.3

Q ss_pred             ceeEEEccCC------CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCC
Q 020768           18 NMAAWLLGVN------TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE   91 (321)
Q Consensus        18 ~~a~~~~~~~------~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~   91 (321)
                      ||++++.+++      .++++++|.|.|+++||+|||.++++|++|+..+.|.+...  ..+|.++|||++|+|+++|++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~--~~~p~v~G~e~~G~V~~vG~~   78 (324)
T cd08291           1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGST--KALPVPPGFEGSGTVVAAGGG   78 (324)
T ss_pred             CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCC--CCCCcCCCcceEEEEEEECCC
Confidence            6888887543      58888999999999999999999999999999888754321  346889999999999999999


Q ss_pred             CCC-CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHH
Q 020768           92 VKT-LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSV  169 (321)
Q Consensus        92 v~~-~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~  169 (321)
                      +++ |++||+|+..+.                           .+|+|+||+.++++.++++|+++++.+++.+ ....+
T Consensus        79 v~~~~~vGd~V~~~~~---------------------------~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~t  131 (324)
T cd08291          79 PLAQSLIGKRVAFLAG---------------------------SYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLT  131 (324)
T ss_pred             ccccCCCCCEEEecCC---------------------------CCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHH
Confidence            996 999999987521                           1499999999999999999999999988743 35556


Q ss_pred             HHHHHHHcCCCCCCEEEEE-cC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHH
Q 020768          170 GLHACRRANIGPETNVLIM-GA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKI  247 (321)
Q Consensus       170 a~~~l~~~~~~~g~~vlI~-Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~  247 (321)
                      +|..++.... ++++++|+ |+ |++|++++|+|+++|+ .+++++++++|.++++++|++++++++.  .++.+.++++
T Consensus       132 a~~~~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~v~~~  207 (324)
T cd08291         132 ALGMLETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGAEYVLNSSD--PDFLEDLKEL  207 (324)
T ss_pred             HHHHHHhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEECCC--ccHHHHHHHH
Confidence            7755555554 56666665 55 9999999999999999 6888889999999999999999988653  4666666655


Q ss_pred             HHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC-c-cccchhhhccceEEEEeehhHH
Q 020768          248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE-M-TVPLTPAAARYLIYSFLFHFFL  313 (321)
Q Consensus       248 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-~~~~~~~~~k~~~i~g~~~~~~  313 (321)
                      .  .+.++|++||++|+. .....+++++++|+++.+|..... . .++...++.|++++.|+....+
T Consensus       208 ~--~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (324)
T cd08291         208 I--AKLNATIFFDAVGGG-LTGQILLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTW  272 (324)
T ss_pred             h--CCCCCcEEEECCCcH-HHHHHHHhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHh
Confidence            3  356899999999974 567789999999999999965432 2 3666778889999999987654

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=100.00  E-value=1.8e-35  Score=275.53  Aligned_cols=283  Identities=29%  Similarity=0.486  Sum_probs=232.0

Q ss_pred             ceeEEEccCCCeEEEEecCCCC-CCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768           18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (321)
Q Consensus        18 ~~a~~~~~~~~l~~~e~~~p~~-~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~   96 (321)
                      ||++++.+++.++++++|.|.+ +++|++|||.++++|+.|++.+.|...    ..+|.++|||++|+|+++|++++.++
T Consensus         1 m~~~~~~~~~~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~----~~~p~~~g~e~~G~V~~vG~~v~~~~   76 (375)
T cd08282           1 MKAVVYGGPGNVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG----AEPGLVLGHEAMGEVEEVGSAVESLK   76 (375)
T ss_pred             CceEEEecCCceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC----CCCCceeccccEEEEEEeCCCCCcCC
Confidence            6788888888999999999996 899999999999999999998887543    34588999999999999999999999


Q ss_pred             CCCEEEEcCCccCCCCccccCCCCCCCCCccc---------cccCCCCCcceeEEEecCC--cEEECCCCCChhh---hc
Q 020768           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKF---------FATPPVHGSLANQVVHPAD--LCFKLPDNVSLEE---GA  162 (321)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~G~~~~~~~v~~~--~~~~ip~~~~~~~---aa  162 (321)
                      +||+|+..+..+|+.|..|..++.++|.+...         .+....+|+|++|+.++.+  .++++|+++++.+   ++
T Consensus        77 ~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a  156 (375)
T cd08282          77 VGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYL  156 (375)
T ss_pred             CCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhhee
Confidence            99999999999999999999999999975321         1112346999999999976  8999999999984   34


Q ss_pred             -cchhhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHH
Q 020768          163 -MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA  241 (321)
Q Consensus       163 -~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~  241 (321)
                       +..+++++|+++..+.+++|++|+|+|+|++|++++|+|+++|+..+++++++++|.++++++|+. .+++.  ..++.
T Consensus       157 ~~~~~~~ta~~a~~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~v~~~--~~~~~  233 (375)
T cd08282         157 MLSDIFPTGWHGLELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI-PIDFS--DGDPV  233 (375)
T ss_pred             eecchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe-EeccC--cccHH
Confidence             445788999999778899999999988899999999999999986688899999999999999984 44433  24555


Q ss_pred             HHHHHHHHHhCCCccEEEEcCCCHH-----------HHHHHHHHcccCCEEEEEcCCCC-------------Cccccchh
Q 020768          242 EEVEKIQKAMGTGIDVSFDCAGFNK-----------TMSTALSATRAGGKVCLVGMGHL-------------EMTVPLTP  297 (321)
Q Consensus       242 ~~~~~~~~~~~~~~d~vid~~g~~~-----------~~~~~~~~l~~~G~~v~~g~~~~-------------~~~~~~~~  297 (321)
                      +.+.++.   ++++|+++||+|...           .+..++++++++|+++.+|....             ...+++..
T Consensus       234 ~~i~~~~---~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  310 (375)
T cd08282         234 EQILGLE---PGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFGL  310 (375)
T ss_pred             HHHHHhh---CCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHHH
Confidence            5555442   357999999999752           58899999999999998885431             12356666


Q ss_pred             hhccceEEEEeeh
Q 020768          298 AAARYLIYSFLFH  310 (321)
Q Consensus       298 ~~~k~~~i~g~~~  310 (321)
                      ++.++.++.+...
T Consensus       311 ~~~~~~~~~~~~~  323 (375)
T cd08282         311 LWAKGLSFGTGQA  323 (375)
T ss_pred             HHhcCcEEEEecC
Confidence            7788888766644

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.1e-35  Score=272.00  Aligned_cols=284  Identities=32%  Similarity=0.461  Sum_probs=238.7

Q ss_pred             ceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (321)
Q Consensus        18 ~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~   96 (321)
                      ||++++..+ ..+++++.|.|.+.++||+||+.++++|+.|+..+.|....   ..+|.++|+|++|+|+++|++++.|+
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~~G~~~~~~~   77 (345)
T cd08260           1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPD---VTLPHVPGHEFAGVVVEVGEDVSRWR   77 (345)
T ss_pred             CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCC---CCCCeeeccceeEEEEEECCCCccCC
Confidence            788888754 45899999999999999999999999999999988875431   34588999999999999999999999


Q ss_pred             CCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCC--cEEECCCCCChhhhccch-hhHHHHHH
Q 020768           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (321)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~--~~~~ip~~~~~~~aa~~~-~~~~a~~~  173 (321)
                      +||+|+..+...|++|.+|..++.++|.+....+ ...+|+|++|+.++..  .++++|+++++.+++.+. +..+||++
T Consensus        78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~  156 (345)
T cd08260          78 VGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPG-FTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRA  156 (345)
T ss_pred             CCCEEEECCCCCCCCCccccCcCcccCCCCcccc-cCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHH
Confidence            9999998666789999999999999999864332 2347999999999974  999999999998887654 77889998


Q ss_pred             H-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhC
Q 020768          174 C-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       174 l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~  252 (321)
                      + +..++.++++++|+|+|++|++++|+|+++|. .++++.+++++.++++++|++.+++.+. ..++.+.+..+.   +
T Consensus       157 l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~-~~~~~~~~~~~~---~  231 (345)
T cd08260         157 LVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNASE-VEDVAAAVRDLT---G  231 (345)
T ss_pred             HHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEcccc-chhHHHHHHHHh---C
Confidence            7 45788999999999999999999999999999 6888889999999999999998887643 134555555442   2


Q ss_pred             CCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC---ccccchhhhccceEEEEeeh
Q 020768          253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE---MTVPLTPAAARYLIYSFLFH  310 (321)
Q Consensus       253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~k~~~i~g~~~  310 (321)
                      +++|++||++|+...+...+++++++|+++.+|.....   ..+++..++.+++++.++..
T Consensus       232 ~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (345)
T cd08260         232 GGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHG  292 (345)
T ss_pred             CCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCc
Confidence            38999999999767889999999999999999965432   35666667789999999754

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=100.00  E-value=7.8e-36  Score=273.55  Aligned_cols=278  Identities=26%  Similarity=0.400  Sum_probs=233.8

Q ss_pred             ceeEEEccCCC-eEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768           18 NMAAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (321)
Q Consensus        18 ~~a~~~~~~~~-l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~   96 (321)
                      ||++++.+++. ++++++|.|.++++|++||+.++++|+.|+....|..+.   .++|.++|||++|+|+++|++++.++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~v~~~g~~~~~~~   77 (334)
T PRK13771          1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPR---MKYPVILGHEVVGTVEEVGENVKGFK   77 (334)
T ss_pred             CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCC---CCCCeeccccceEEEEEeCCCCccCC
Confidence            78999987765 999999999999999999999999999999887764321   35578999999999999999998999


Q ss_pred             CCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHHHH
Q 020768           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR  175 (321)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l~  175 (321)
                      +||+|++.+..+|++|.+|..+.+++|+...+++. +.+|+|++|+.++.+.++++|+++++.+++.+. .+.++|++++
T Consensus        78 ~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~  156 (334)
T PRK13771         78 PGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGE-ELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLR  156 (334)
T ss_pred             CCCEEEECCCCCCcCChhhcCCCcccCcccccccc-ccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHH
Confidence            99999999888999999999999999998776553 468999999999999999999999998888665 7788899887


Q ss_pred             HcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCC
Q 020768          176 RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       176 ~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~  254 (321)
                      ...++++++++|+|+ |.+|++++|+|+++|+ .++++++++++.+.++++ ++.+++..    ++.+.++++     .+
T Consensus       157 ~~~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~v~~~-----~~  225 (334)
T PRK13771        157 RAGVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS----KFSEEVKKI-----GG  225 (334)
T ss_pred             hcCCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch----hHHHHHHhc-----CC
Confidence            668899999999998 9999999999999999 588888889999998888 66655432    333333331     36


Q ss_pred             ccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCc--cccchhhhccceEEEEeehh
Q 020768          255 IDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEM--TVPLTPAAARYLIYSFLFHF  311 (321)
Q Consensus       255 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~k~~~i~g~~~~  311 (321)
                      +|+++||+|+ .....+++.|+++|+++.+|......  ++++..++.+++++.+.+..
T Consensus       226 ~d~~ld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (334)
T PRK13771        226 ADIVIETVGT-PTLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISA  283 (334)
T ss_pred             CcEEEEcCCh-HHHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCC
Confidence            9999999997 57889999999999999999654322  24455556789999987653

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=100.00  E-value=3.3e-35  Score=269.30  Aligned_cols=282  Identities=35%  Similarity=0.572  Sum_probs=238.6

Q ss_pred             ceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCC
Q 020768           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (321)
Q Consensus        18 ~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~   97 (321)
                      |||+++.+++.+++.+.+.|.++++||+|||.++++|+.|+....|...    ..+|.++|+|++|+|+++|++++.+++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~----~~~p~~~g~~~~G~v~~vG~~v~~~~~   76 (334)
T cd08234           1 MKALVYEGPGELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFG----AAPPLVPGHEFAGVVVAVGSKVTGFKV   76 (334)
T ss_pred             CeeEEecCCCceEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCC----CCCCcccccceEEEEEEeCCCCCCCCC
Confidence            7899998888999999999999999999999999999999998887543    236789999999999999999999999


Q ss_pred             CCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHHHHHc
Q 020768           98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA  177 (321)
Q Consensus        98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~~  177 (321)
                      ||+|+..+...|+.|.+|..++.++|..+.+.+. ...|+|++|+.++.+.++++|+++++.+++.+.++.+++++++.+
T Consensus        77 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~~  155 (334)
T cd08234          77 GDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGV-TRNGGFAEYVVVPAKQVYKIPDNLSFEEAALAEPLSCAVHGLDLL  155 (334)
T ss_pred             CCEEEEcCCcCCCCCccccCcChhhCCCcceecc-CCCCcceeEEEecHHHcEECcCCCCHHHHhhhhHHHHHHHHHHhc
Confidence            9999998888999999999999999988765432 257999999999999999999999999988666777888888778


Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccE
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      ++++|++|+|+|+|.+|.+++++|+++|+++++++++++++.++++++|++.+++++..  ++...  .  ...+.++|+
T Consensus       156 ~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~--~--~~~~~~vd~  229 (334)
T cd08234         156 GIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSRE--DPEAQ--K--EDNPYGFDV  229 (334)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCCC--CHHHH--H--HhcCCCCcE
Confidence            99999999999889999999999999999658888899999999999999877765432  33222  1  223578999


Q ss_pred             EEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC--CccccchhhhccceEEEEeeh
Q 020768          258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHL--EMTVPLTPAAARYLIYSFLFH  310 (321)
Q Consensus       258 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~k~~~i~g~~~  310 (321)
                      +||++|........+++++++|+++.+|....  ...++...++.+++++.+...
T Consensus       230 v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (334)
T cd08234         230 VIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFI  284 (334)
T ss_pred             EEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEecc
Confidence            99999877788999999999999999996543  233444445568888888653

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=4.3e-35  Score=269.45  Aligned_cols=285  Identities=30%  Similarity=0.420  Sum_probs=241.5

Q ss_pred             ceeEEEccCC--CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCC
Q 020768           18 NMAAWLLGVN--TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (321)
Q Consensus        18 ~~a~~~~~~~--~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~   95 (321)
                      |||+++.+++  .+++++++.|.+.++|++||+.++++|+.|...+.+.....  ...|.++|+|++|+|+++|++++.+
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~V~~vG~~~~~~   78 (341)
T cd08297           1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVK--PKLPLIGGHEGAGVVVAVGPGVSGL   78 (341)
T ss_pred             CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcC--CCCCccCCcccceEEEEeCCCCCCC
Confidence            7899988665  89999999999999999999999999999998887654322  3447789999999999999999999


Q ss_pred             CCCCEEEEcC-CccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHHH
Q 020768           96 VPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHA  173 (321)
Q Consensus        96 ~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~~  173 (321)
                      ++||+|+..+ ...|+.|.+|..++..+|.+....+. ...|++++|+.++++.++++|+++++.+++.+ ....+||++
T Consensus        79 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~  157 (341)
T cd08297          79 KVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGY-TVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKA  157 (341)
T ss_pred             CCCCEEEEecCCCCCCCCccccCCCcccCCCcccccc-ccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHH
Confidence            9999999876 45899999999999999988765543 45799999999999999999999999988754 477889999


Q ss_pred             HHHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhC
Q 020768          174 CRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~  252 (321)
                      +...++++++++||+|+ +++|++++++|+++|. .++++.+++++.+.++++|++.++++..  .++.+.+.++.  .+
T Consensus       158 ~~~~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~~~~~--~~  232 (341)
T cd08297         158 LKKAGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVDFKK--SDDVEAVKELT--GG  232 (341)
T ss_pred             HHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEcCCC--ccHHHHHHHHh--cC
Confidence            87778999999999998 7799999999999999 6888889999999999999998887643  35555555542  35


Q ss_pred             CCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC-ccccchhhhccceEEEEeeh
Q 020768          253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE-MTVPLTPAAARYLIYSFLFH  310 (321)
Q Consensus       253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~k~~~i~g~~~  310 (321)
                      .++|+++|+.+.......++++++++|+++.+|..... .+++...++.+++++.+...
T Consensus       233 ~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (341)
T cd08297         233 GGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLV  291 (341)
T ss_pred             CCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEecc
Confidence            78999999888778899999999999999999965432 35666667789999998654

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=4.3e-35  Score=272.30  Aligned_cols=284  Identities=32%  Similarity=0.499  Sum_probs=238.8

Q ss_pred             ceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC--
Q 020768           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT--   94 (321)
Q Consensus        18 ~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~--   94 (321)
                      ||++++..+ ..+++++.|.|.++++||+||+.++++|++|+..+.+..+    ..+|.++|||++|+|+++|+++++  
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~----~~~p~~~g~e~~G~v~~vG~~~~~~~   76 (367)
T cd08263           1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELP----FPPPFVLGHEISGEVVEVGPNVENPY   76 (367)
T ss_pred             CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCC----CCCCcccccccceEEEEeCCCCCCCC
Confidence            688888765 5689999999999999999999999999999998876542    356789999999999999999988  


Q ss_pred             -CCCCCEEEEcCCccCCCCccccCCCCCCCCCcccccc---------------------CCCCCcceeEEEecCCcEEEC
Q 020768           95 -LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT---------------------PPVHGSLANQVVHPADLCFKL  152 (321)
Q Consensus        95 -~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~G~~~~~~~v~~~~~~~i  152 (321)
                       |++||+|+..+..+|+.|.+|..++.++|++..++..                     ....|++++|+.++.+.++++
T Consensus        77 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  156 (367)
T cd08263          77 GLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPL  156 (367)
T ss_pred             cCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEEC
Confidence             9999999998888999999999999999997542110                     013699999999999999999


Q ss_pred             CCCCChhhhccch-hhHHHHHHHHH-cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeE
Q 020768          153 PDNVSLEEGAMCE-PLSVGLHACRR-ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI  230 (321)
Q Consensus       153 p~~~~~~~aa~~~-~~~~a~~~l~~-~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~v  230 (321)
                      |+++++.+++.+. ++.+||+++.. ..+.++++|||+|+|++|++++++|+++|+..++++++++++.++++++|++.+
T Consensus       157 P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v  236 (367)
T cd08263         157 PESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHT  236 (367)
T ss_pred             CCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceE
Confidence            9999999988664 68889998854 677899999999879999999999999999668888889999999999999888


Q ss_pred             EecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC--CccccchhhhccceEEEEe
Q 020768          231 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL--EMTVPLTPAAARYLIYSFL  308 (321)
Q Consensus       231 i~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~k~~~i~g~  308 (321)
                      ++.+.  .++.+.++++.  .+.++|++||++++....+.++++++++|+++.+|....  ...++...++.+++++.++
T Consensus       237 ~~~~~--~~~~~~l~~~~--~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  312 (367)
T cd08263         237 VNAAK--EDAVAAIREIT--GGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIGS  312 (367)
T ss_pred             ecCCc--ccHHHHHHHHh--CCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEEec
Confidence            87543  45555555442  356799999999985488899999999999999986543  3456667777899999886


Q ss_pred             e
Q 020768          309 F  309 (321)
Q Consensus       309 ~  309 (321)
                      .
T Consensus       313 ~  313 (367)
T cd08263         313 Y  313 (367)
T ss_pred             C
Confidence            4

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=100.00  E-value=5e-35  Score=269.09  Aligned_cols=277  Identities=32%  Similarity=0.564  Sum_probs=230.5

Q ss_pred             CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCC
Q 020768           27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPG  106 (321)
Q Consensus        27 ~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~~  106 (321)
                      ..+++++.|.|.|+++|++|||.++++|+.|+.++.+.........+|.++|+|++|+|+++|++++.|++||+|+..+.
T Consensus         9 ~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~   88 (340)
T TIGR00692         9 YGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSVETH   88 (340)
T ss_pred             CCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEEECCc
Confidence            46889999999999999999999999999999876553211112345778999999999999999999999999999998


Q ss_pred             ccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHHHHHcCCCCCCEEE
Q 020768          107 ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVL  186 (321)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vl  186 (321)
                      ..|+.|..|..+..++|++.++++. ...|+|++|+.++++.++++|+++++.+++...++.++++++ ...+++|++++
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~a~~~~-~~~~~~g~~vl  166 (340)
T TIGR00692        89 IVCGKCYACRRGQYHVCQNTKIFGV-DTDGCFAEYAVVPAQNIWKNPKSIPPEYATIQEPLGNAVHTV-LAGPISGKSVL  166 (340)
T ss_pred             CCCCCChhhhCcChhhCcCcceEee-cCCCcceeEEEeehHHcEECcCCCChHhhhhcchHHHHHHHH-HccCCCCCEEE
Confidence            9999999999999999999766532 357999999999999999999999987777666888888776 34567999999


Q ss_pred             EEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHH
Q 020768          187 IMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNK  266 (321)
Q Consensus       187 I~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~  266 (321)
                      |.|+|++|++++|+|+++|.+.|+++++++++.++++++|++.++++..  .++.+.+.++.  .+.++|++|||+|+..
T Consensus       167 I~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~l~~~~--~~~~~d~vld~~g~~~  242 (340)
T TIGR00692       167 VTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK--EDVVKEVADLT--DGEGVDVFLEMSGAPK  242 (340)
T ss_pred             EECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccc--cCHHHHHHHhc--CCCCCCEEEECCCCHH
Confidence            9888999999999999999965888888899999999999988777543  45666555542  3567999999999877


Q ss_pred             HHHHHHHHcccCCEEEEEcCCCCCccccch-hhhccceEEEEee
Q 020768          267 TMSTALSATRAGGKVCLVGMGHLEMTVPLT-PAAARYLIYSFLF  309 (321)
Q Consensus       267 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~k~~~i~g~~  309 (321)
                      .+...+++|+++|+++.+|......+++.. .++.+++++.+..
T Consensus       243 ~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  286 (340)
T TIGR00692       243 ALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGIT  286 (340)
T ss_pred             HHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcceEEEEEe
Confidence            889999999999999999976443444444 5777889888764

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.8e-35  Score=267.97  Aligned_cols=274  Identities=29%  Similarity=0.423  Sum_probs=228.8

Q ss_pred             ceeEEEccC--CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCC
Q 020768           18 NMAAWLLGV--NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (321)
Q Consensus        18 ~~a~~~~~~--~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~   95 (321)
                      ||++++.++  +.+++++.+.|+++++||+||+.++++|++|+..+.+..    ...+|.++|||++|+|+++|++++.|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~~----~~~~~~~~g~e~~G~v~~vG~~v~~~   76 (325)
T cd08264           1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVK----VKPMPHIPGAEFAGVVEEVGDHVKGV   76 (325)
T ss_pred             CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCCC----CCCCCeecccceeEEEEEECCCCCCC
Confidence            688888644  478888999988999999999999999999998876321    12357799999999999999999999


Q ss_pred             CCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHHH
Q 020768           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC  174 (321)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l  174 (321)
                      ++||+|++.+..+|++|.+|..++.++|.+..+++. ...|+|++|+.++++.++++|+++++++++.+. .+.++|+++
T Consensus        77 ~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l  155 (325)
T cd08264          77 KKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGV-VSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHAL  155 (325)
T ss_pred             CCCCEEEECCCcCCCCChhhcCCCccccCccceeec-cCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHH
Confidence            999999999888999999999999999998765543 357999999999999999999999999888654 667899998


Q ss_pred             HHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCC
Q 020768          175 RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       175 ~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~  253 (321)
                      +.+++++|++++|+|+ |++|++++++|+++|.+ +++++    +.+.++++|++.+++.+.    ..+.+.++   . .
T Consensus       156 ~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~-v~~~~----~~~~~~~~g~~~~~~~~~----~~~~l~~~---~-~  222 (325)
T cd08264         156 KTAGLGPGETVVVFGASGNTGIFAVQLAKMMGAE-VIAVS----RKDWLKEFGADEVVDYDE----VEEKVKEI---T-K  222 (325)
T ss_pred             HhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCe-EEEEe----HHHHHHHhCCCeeecchH----HHHHHHHH---h-C
Confidence            7788999999999998 99999999999999994 66664    236778899988776432    23334433   2 6


Q ss_pred             CccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCC-CCccccchhhhccceEEEEeeh
Q 020768          254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-LEMTVPLTPAAARYLIYSFLFH  310 (321)
Q Consensus       254 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~k~~~i~g~~~  310 (321)
                      ++|+++|++|+ ..++.++++|+++|+++.+|... ....+++..++.++.++.|+..
T Consensus       223 ~~d~vl~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (325)
T cd08264         223 MADVVINSLGS-SFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTG  279 (325)
T ss_pred             CCCEEEECCCH-HHHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccC
Confidence            79999999996 68899999999999999999642 2356777788889999999743

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=100.00  E-value=7.5e-35  Score=267.06  Aligned_cols=285  Identities=33%  Similarity=0.544  Sum_probs=240.6

Q ss_pred             ceeEEEccCC-C-eEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCC
Q 020768           18 NMAAWLLGVN-T-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (321)
Q Consensus        18 ~~a~~~~~~~-~-l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~   95 (321)
                      ||++++..++ . +.+.+.|.|.+++++|+|||.++++|+.|...+.+....  ....|.++|+|++|+|+++|++++.+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~--~~~~~~~~g~~~~G~v~~~G~~v~~~   78 (338)
T cd08254           1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPT--LTKLPLTLGHEIAGTVVEVGAGVTNF   78 (338)
T ss_pred             CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcc--cCCCCEeccccccEEEEEECCCCccC
Confidence            7888888654 3 588899999999999999999999999999988775431  13457899999999999999999999


Q ss_pred             CCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHHHH
Q 020768           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHAC  174 (321)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~~l  174 (321)
                      ++||+|+..+..+|+.|.+|..++.++|......+. ..+|+|++|+.++.+.++++|+++++.+++.+ .++.+||+++
T Consensus        79 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l  157 (338)
T cd08254          79 KVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGL-GIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAV  157 (338)
T ss_pred             CCCCEEEECCCCCCCCChhhhCcCcccCCCCCcccc-ccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHH
Confidence            999999999988999999999999999976554433 46799999999999999999999999888755 5888999988


Q ss_pred             HH-cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCC
Q 020768          175 RR-ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       175 ~~-~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~  253 (321)
                      .. ..++++++|||.|+|++|++++++|+.+|. .++++++++++.+.++++|++.+++..+  ..+.+.+ ..  ..+.
T Consensus       158 ~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~~--~~~~~~~-~~--~~~~  231 (338)
T cd08254         158 VRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSLD--DSPKDKK-AA--GLGG  231 (338)
T ss_pred             HhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCCC--cCHHHHH-HH--hcCC
Confidence            54 678999999998879999999999999999 5888889999999999999988776433  3344444 22  3467


Q ss_pred             CccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehh
Q 020768          254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF  311 (321)
Q Consensus       254 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~  311 (321)
                      ++|+++||+|....++.++++|+++|+++.+|.......++...++.+++++.|++..
T Consensus       232 ~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (338)
T cd08254         232 GFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGG  289 (338)
T ss_pred             CceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCccCHHHHhhCccEEEEeccC
Confidence            8999999999878899999999999999999976555567777788899999986543

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=1.7e-34  Score=263.32  Aligned_cols=259  Identities=25%  Similarity=0.271  Sum_probs=215.7

Q ss_pred             ceeEEEccCC----CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCC
Q 020768           18 NMAAWLLGVN----TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (321)
Q Consensus        18 ~~a~~~~~~~----~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~   93 (321)
                      ||++++.+++    .++++++|.|.++++||+|||.++++|+.|+..+.|.....  ...|.++|||++|+|+++|++++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~--~~~p~~~G~e~~G~V~~~G~~v~   78 (324)
T cd08292           1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYK--PELPAIGGSEAVGVVDAVGEGVK   78 (324)
T ss_pred             CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCC--CCCCCCCCcceEEEEEEeCCCCC
Confidence            6888887553    38899999999999999999999999999999887754321  34578999999999999999999


Q ss_pred             CCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHH
Q 020768           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLH  172 (321)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~  172 (321)
                      .|++||+|+..+                            ..|+|++|+.+++..++++|+++++.+++.+. ...++|+
T Consensus        79 ~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  130 (324)
T cd08292          79 GLQVGQRVAVAP----------------------------VHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALM  130 (324)
T ss_pred             CCCCCCEEEecc----------------------------CCCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHH
Confidence            999999998752                            25999999999999999999999999888654 5667888


Q ss_pred             HHHHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768          173 ACRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       173 ~l~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      +++.+++++|++|||+|+ |.+|++++|+|+++|+ .++++..++++.+.++++|++.+++..+  .++.+.+.++.  .
T Consensus       131 ~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~i~~~~--~  205 (324)
T cd08292         131 LLDFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVVSTEQ--PGWQDKVREAA--G  205 (324)
T ss_pred             HHHhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEEcCCC--chHHHHHHHHh--C
Confidence            887789999999999988 9999999999999999 5777777888888888899988877533  45666665542  3


Q ss_pred             CCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-CccccchhhhccceEEEEeehhH
Q 020768          252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARYLIYSFLFHFF  312 (321)
Q Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~~  312 (321)
                      +.++|++||++|+ .....++++++++|+++.+|.... ...++...++.+++++.++....
T Consensus       206 ~~~~d~v~d~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (324)
T cd08292         206 GAPISVALDSVGG-KLAGELLSLLGEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGR  266 (324)
T ss_pred             CCCCcEEEECCCC-hhHHHHHHhhcCCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHH
Confidence            6789999999998 467899999999999999996533 34556556778999999987654

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=5.3e-34  Score=260.86  Aligned_cols=274  Identities=26%  Similarity=0.373  Sum_probs=230.0

Q ss_pred             ceeEEEccCC-----CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCC
Q 020768           18 NMAAWLLGVN-----TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (321)
Q Consensus        18 ~~a~~~~~~~-----~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v   92 (321)
                      ||++++.+++     .+++++.+.|.++++||+||+.++++|++|+..+.|..+.   ...|.++|||++|+|+++|+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~vG~~v   77 (329)
T cd08298           1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPP---PKLPLIPGHEIVGRVEAVGPGV   77 (329)
T ss_pred             CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCC---CCCCccccccccEEEEEECCCC
Confidence            6788887655     6889999998899999999999999999999988775422   3457899999999999999999


Q ss_pred             CCCCCCCEEEEcCC-ccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHH
Q 020768           93 KTLVPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVG  170 (321)
Q Consensus        93 ~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a  170 (321)
                      +++++||+|++.+. .+|++|.+|..+..++|+...+.+. ..+|+|++|+.++.+.++++|+++++.+++.+ .++.+|
T Consensus        78 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta  156 (329)
T cd08298          78 TRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGY-TVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIG  156 (329)
T ss_pred             CCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCcccccc-ccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHH
Confidence            99999999988653 5899999999999999998876654 35799999999999999999999999988744 578889


Q ss_pred             HHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHH
Q 020768          171 LHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA  250 (321)
Q Consensus       171 ~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~  250 (321)
                      |++++.++++++++++|+|+|++|+++++++++.|. .+++++.++++.++++++|++.+++....              
T Consensus       157 ~~~~~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~--------------  221 (329)
T cd08298         157 YRALKLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAGDSDDL--------------  221 (329)
T ss_pred             HHHHHhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEeccCcc--------------
Confidence            999977899999999999889999999999999998 68888888999999999999877764321              


Q ss_pred             hCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC-ccccchhhhccceEEEEeehh
Q 020768          251 MGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE-MTVPLTPAAARYLIYSFLFHF  311 (321)
Q Consensus       251 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~k~~~i~g~~~~  311 (321)
                      .+.++|+++++.+....++.++++++++|+++.+|..... ..+++.. +.++..+.++...
T Consensus       222 ~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~  282 (329)
T cd08298         222 PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYEL-LWGEKTIRSVANL  282 (329)
T ss_pred             CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchhh-hhCceEEEEecCC
Confidence            1357999999977778899999999999999999854322 2344443 4577778776643

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=9.5e-34  Score=259.01  Aligned_cols=278  Identities=33%  Similarity=0.511  Sum_probs=232.1

Q ss_pred             ceeEEEcc-CCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768           18 NMAAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (321)
Q Consensus        18 ~~a~~~~~-~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~   96 (321)
                      ||++++.. ++.+.+++.|.|.+.++||+|||+++++|+.|+....|..+.   ...|.++|||++|+|+++|++++.|+
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~v~~~G~~v~~~~   77 (332)
T cd08259           1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPR---GKYPLILGHEIVGTVEEVGEGVERFK   77 (332)
T ss_pred             CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCC---CCCCeeccccceEEEEEECCCCccCC
Confidence            68888875 578999999999999999999999999999999988775432   34578999999999999999999999


Q ss_pred             CCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHHHHH
Q 020768           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHACR  175 (321)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~~l~  175 (321)
                      +||+|++.+...|+.|.+|..+..++|.+...++ ....|+|++|+.++...++++|+++++++++.+ .++.++|++++
T Consensus        78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~  156 (332)
T cd08259          78 PGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYG-EEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALK  156 (332)
T ss_pred             CCCEEEECCCCCCcCChhhhCCCcccCCCccccc-cccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHH
Confidence            9999999988899999999999999998764443 356799999999999999999999999888755 47788999987


Q ss_pred             HcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCC
Q 020768          176 RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       176 ~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~  254 (321)
                      .+.+.+++++||+|+ |++|++++++++..|. .++++.+++++.+.+++++.+.+++.+.    +.+.+.+.     .+
T Consensus       157 ~~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-----~~  226 (332)
T cd08259         157 RAGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGSK----FSEDVKKL-----GG  226 (332)
T ss_pred             HhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecHH----HHHHHHhc-----cC
Confidence            788999999999998 9999999999999999 5777778888888888899877665321    34444332     37


Q ss_pred             ccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC-ccccchhhhccceEEEEeeh
Q 020768          255 IDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE-MTVPLTPAAARYLIYSFLFH  310 (321)
Q Consensus       255 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~k~~~i~g~~~  310 (321)
                      +|++++++|. .....++++++++|+++.+|..... ..++......+++++.++..
T Consensus       227 ~d~v~~~~g~-~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (332)
T cd08259         227 ADVVIELVGS-PTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSIS  282 (332)
T ss_pred             CCEEEECCCh-HHHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecC
Confidence            9999999997 4678899999999999999865432 22344445568888888754

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.3e-33  Score=258.42  Aligned_cols=286  Identities=31%  Similarity=0.472  Sum_probs=236.3

Q ss_pred             ceeEEEc---cCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768           18 NMAAWLL---GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (321)
Q Consensus        18 ~~a~~~~---~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~   94 (321)
                      ||++++.   .+..+++++.+.|.+.+++|+||+.++++|++|+..+.|.....  ..+|.++|||++|+|+++|++++.
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~v~~~G~~~~~   78 (342)
T cd08266           1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIK--LPLPHILGSDGAGVVEAVGPGVTN   78 (342)
T ss_pred             CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCC--CCCCeecccceEEEEEEeCCCCCC
Confidence            6888887   44678888999988999999999999999999999887653211  345789999999999999999999


Q ss_pred             CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHH
Q 020768           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (321)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~  173 (321)
                      |++||+|++.+..+|++|.+|..+.++.|....+.+. ...|++++|+.++.+.++++|+++++.+++.+. .+.+++++
T Consensus        79 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~  157 (342)
T cd08266          79 VKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGE-HVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHM  157 (342)
T ss_pred             CCCCCEEEEccccccccchhhcccccccccccccccc-ccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHH
Confidence            9999999999999999999999999999998765543 457999999999999999999999998888664 66788888


Q ss_pred             H-HHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768          174 C-RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       174 l-~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      + +...++++++++|+|+ +++|+++++++++.|. .++++++++++.+.++.++.+.+++..  ..++.+.+.+..  .
T Consensus       158 l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~  232 (342)
T cd08266         158 LVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVIDYR--KEDFVREVRELT--G  232 (342)
T ss_pred             HHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEecC--ChHHHHHHHHHh--C
Confidence            6 4588899999999998 7999999999999999 578888888888888888887766532  234444444332  2


Q ss_pred             CCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-CccccchhhhccceEEEEeehhH
Q 020768          252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARYLIYSFLFHFF  312 (321)
Q Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~~  312 (321)
                      +.++|++++++|. ..+...+++++++|+++.+|.... ...++....+.+++++.+.....
T Consensus       233 ~~~~d~~i~~~g~-~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (342)
T cd08266         233 KRGVDVVVEHVGA-ATWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGT  293 (342)
T ss_pred             CCCCcEEEECCcH-HHHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCC
Confidence            4579999999996 678899999999999999986544 23455555678999998876543

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=100.00  E-value=1.9e-33  Score=257.29  Aligned_cols=281  Identities=27%  Similarity=0.371  Sum_probs=233.4

Q ss_pred             eeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCC
Q 020768           19 MAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (321)
Q Consensus        19 ~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~   97 (321)
                      |++++.++ +.+++++.|.|.+.++|++||+.++++|+.|+..+.+....   ..+|.++|||++|+|+++|++++.|++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~p~~~g~e~~G~v~~~g~~~~~~~~   77 (330)
T cd08245           1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGG---SKYPLVPGHEIVGEVVEVGAGVEGRKV   77 (330)
T ss_pred             CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCC---CCCCcccCccceEEEEEECCCCccccc
Confidence            57788776 68999999999999999999999999999999988775421   346889999999999999999999999


Q ss_pred             CCEEEEcCC-ccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHHHHH
Q 020768           98 GDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHACR  175 (321)
Q Consensus        98 Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~~l~  175 (321)
                      ||+|++.+. .+|++|.+|..+..++|.+..+.+. ...|+|++|+.++.++++++|+++++.+++.+ ....+||++++
T Consensus        78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~  156 (330)
T cd08245          78 GDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGY-TTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALR  156 (330)
T ss_pred             CCEEEEccccCCCCCChhhhCcCcccCcCccccCc-ccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHH
Confidence            999988654 4799999999999999998654432 25799999999999999999999999998855 46678898887


Q ss_pred             HcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCc
Q 020768          176 RANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (321)
Q Consensus       176 ~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~  255 (321)
                      ...++++++|||+|+|++|++++++|+.+|. .++++++++++.++++++|++.+++...  .+...   .    ...++
T Consensus       157 ~~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~---~----~~~~~  226 (330)
T cd08245         157 DAGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGA--ELDEQ---A----AAGGA  226 (330)
T ss_pred             hhCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCC--cchHH---h----ccCCC
Confidence            7889999999999888899999999999999 6888889999999999999888776432  12111   1    13579


Q ss_pred             cEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC-ccccchhhhccceEEEEeehhHH
Q 020768          256 DVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE-MTVPLTPAAARYLIYSFLFHFFL  313 (321)
Q Consensus       256 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~k~~~i~g~~~~~~  313 (321)
                      |+++|++++......++++++++|+++.+|..... ..++..+++.++.++.++..+..
T Consensus       227 d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (330)
T cd08245         227 DVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGR  285 (330)
T ss_pred             CEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCCH
Confidence            99999988777889999999999999999864332 23335568889999988766543

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-33  Score=258.86  Aligned_cols=258  Identities=18%  Similarity=0.200  Sum_probs=203.8

Q ss_pred             hhhceeEEEc-------cCCCeEEEE---ecCCC-CCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCccccc--ce
Q 020768           15 EEVNMAAWLL-------GVNTLKIQP---FELPS-LGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH--EC   81 (321)
Q Consensus        15 ~~~~~a~~~~-------~~~~l~~~e---~~~p~-~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~--e~   81 (321)
                      +.++|++++.       .+..|++++   .+.|. ++++||||||.++++|+.|.....+....   ...|+++|+  |+
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~---~~~p~~~G~~~~~   82 (348)
T PLN03154          6 VVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDS---YLPPFVPGQRIEG   82 (348)
T ss_pred             cccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCC---CCCCcCCCCeeEe
Confidence            3446777774       124688877   46664 48999999999999999987654332211   235889998  88


Q ss_pred             eEEEEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCc--EEE--CCCCCC
Q 020768           82 AGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL--CFK--LPDNVS  157 (321)
Q Consensus        82 vG~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~--~~~--ip~~~~  157 (321)
                      +|+|..+|++++.|++||+|...                               |+|+||++++...  +++  +|++++
T Consensus        83 ~G~v~~vg~~v~~~~~Gd~V~~~-------------------------------~~~aey~~v~~~~~~~~~~~~P~~~~  131 (348)
T PLN03154         83 FGVSKVVDSDDPNFKPGDLISGI-------------------------------TGWEEYSLIRSSDNQLRKIQLQDDIP  131 (348)
T ss_pred             eEEEEEEecCCCCCCCCCEEEec-------------------------------CCcEEEEEEeccccceEEccCcCCCC
Confidence            99999999999999999999753                               7899999999753  544  489998


Q ss_pred             hh-hhccc-hhhHHHHHHHH-HcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-HcCCCeEEe
Q 020768          158 LE-EGAMC-EPLSVGLHACR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADNIVK  232 (321)
Q Consensus       158 ~~-~aa~~-~~~~~a~~~l~-~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~g~~~vi~  232 (321)
                      +. +|+.+ .+..|||+++. .+.+++|++|||+|+ |++|++++|+||++|+ .++++++++++.++++ ++|++.+++
T Consensus       132 ~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~~~~~k~~~~~~~lGa~~vi~  210 (348)
T PLN03154        132 LSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFN  210 (348)
T ss_pred             HHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhcCCCEEEE
Confidence            86 55544 48889999984 588999999999998 9999999999999999 6888889999999987 799999998


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC-c-----cccchhhhccceEEE
Q 020768          233 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE-M-----TVPLTPAAARYLIYS  306 (321)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-----~~~~~~~~~k~~~i~  306 (321)
                      +.+. .++.+.++++   .+.++|++||++|+ ..+..++++++++|+++.+|...+. .     .++...++.|++++.
T Consensus       211 ~~~~-~~~~~~i~~~---~~~gvD~v~d~vG~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~  285 (348)
T PLN03154        211 YKEE-PDLDAALKRY---FPEGIDIYFDNVGG-DMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQ  285 (348)
T ss_pred             CCCc-ccHHHHHHHH---CCCCcEEEEECCCH-HHHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEE
Confidence            6532 2455555544   24589999999996 6889999999999999999965432 1     135566888999999


Q ss_pred             EeehhH
Q 020768          307 FLFHFF  312 (321)
Q Consensus       307 g~~~~~  312 (321)
                      |++.+.
T Consensus       286 g~~~~~  291 (348)
T PLN03154        286 GFLQSD  291 (348)
T ss_pred             EEEHHH
Confidence            988653

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.7e-33  Score=258.31  Aligned_cols=278  Identities=23%  Similarity=0.264  Sum_probs=219.6

Q ss_pred             ceeEEEccC---CCeEEEE-ecCCCCCCCcEEEEEeEeecccccHhhhhccccC-----------------CcCCCCCcc
Q 020768           18 NMAAWLLGV---NTLKIQP-FELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCA-----------------DFVVKEPMV   76 (321)
Q Consensus        18 ~~a~~~~~~---~~l~~~e-~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~-----------------~~~~~~p~~   76 (321)
                      ||++++.++   ..+.+.+ .+.|.+.+++|+|||.++++|++|+..+.|....                 .....+|.+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~   80 (350)
T cd08274           1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI   80 (350)
T ss_pred             CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence            678887654   3466654 5777889999999999999999999988764321                 012456889


Q ss_pred             cccceeEEEEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCC
Q 020768           77 IGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNV  156 (321)
Q Consensus        77 ~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~  156 (321)
                      +|||++|+|+++|++++.|++||+|++.+..+|+.|..|...        ...+ ...+|+|++|+.++...++++|+++
T Consensus        81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~--------~~~~-~~~~g~~~~~~~v~~~~~~~ip~~~  151 (350)
T cd08274          81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADI--------DYIG-SERDGGFAEYTVVPAENAYPVNSPL  151 (350)
T ss_pred             cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccc--------cccC-CCCCccceEEEEecHHHceeCCCCC
Confidence            999999999999999999999999999888888887664322        1121 1246999999999999999999999


Q ss_pred             Chhhhccc-hhhHHHHHHHHHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecC
Q 020768          157 SLEEGAMC-EPLSVGLHACRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS  234 (321)
Q Consensus       157 ~~~~aa~~-~~~~~a~~~l~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~  234 (321)
                      ++.+++.+ .++.++|++++...+++|+++||+|+ |++|++++|+|+++|++ ++++++++ +.+.++++|++.+++..
T Consensus       152 ~~~~~a~l~~~~~ta~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~-vi~~~~~~-~~~~~~~~g~~~~~~~~  229 (350)
T cd08274         152 SDVELATFPCSYSTAENMLERAGVGAGETVLVTGASGGVGSALVQLAKRRGAI-VIAVAGAA-KEEAVRALGADTVILRD  229 (350)
T ss_pred             CHHHHHhcccHHHHHHHHHhhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCE-EEEEeCch-hhHHHHhcCCeEEEeCC
Confidence            99887755 47888999887788999999999998 99999999999999995 66666555 78888999987555432


Q ss_pred             CCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC-ccccchhhhccceEEEEeehhHH
Q 020768          235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE-MTVPLTPAAARYLIYSFLFHFFL  313 (321)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~k~~~i~g~~~~~~  313 (321)
                        .....+  ..  ...+.++|++||++|+ ..++.++++++++|+++.+|..... ..+++..++.+++++.|+.....
T Consensus       230 --~~~~~~--~~--~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (350)
T cd08274         230 --APLLAD--AK--ALGGEPVDVVADVVGG-PLFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLGTR  302 (350)
T ss_pred             --CccHHH--HH--hhCCCCCcEEEecCCH-HHHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecCCH
Confidence              122222  22  2346789999999997 6889999999999999999965443 56777778889999999876443

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=1.5e-33  Score=259.58  Aligned_cols=225  Identities=21%  Similarity=0.231  Sum_probs=183.3

Q ss_pred             CCeEEEEecCCCCC-CCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcC
Q 020768           27 NTLKIQPFELPSLG-PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEP  105 (321)
Q Consensus        27 ~~l~~~e~~~p~~~-~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~  105 (321)
                      +.++++|.|.|+|. ++||||||.|++||+.|..............++|.++|||++|+|+++|+++++|++||+|+.. 
T Consensus        21 ~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~-   99 (345)
T cd08293          21 ENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF-   99 (345)
T ss_pred             cceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEec-
Confidence            56899999999984 9999999999999999864332111001113467899999999999999999999999999753 


Q ss_pred             CccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhh-----hccchhhHHHHHHHH-HcCC
Q 020768          106 GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEE-----GAMCEPLSVGLHACR-RANI  179 (321)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~-----aa~~~~~~~a~~~l~-~~~~  179 (321)
                                                   .++|+||++++++.++++|+++++++     +++..++.+||+++. .+++
T Consensus       100 -----------------------------~~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~  150 (345)
T cd08293         100 -----------------------------NWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHI  150 (345)
T ss_pred             -----------------------------CCCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccC
Confidence                                         15799999999999999999864332     334457889999984 5778


Q ss_pred             CCC--CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH-cCCCeEEecCCCcccHHHHHHHHHHHhCCCc
Q 020768          180 GPE--TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (321)
Q Consensus       180 ~~g--~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~  255 (321)
                      ++|  ++|||+|+ |++|++++|+|+++|+..|+++++++++.+++++ +|++.++++.+  .++.+.++++   .+.++
T Consensus       151 ~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~--~~~~~~i~~~---~~~gv  225 (345)
T cd08293         151 TPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT--DNVAERLREL---CPEGV  225 (345)
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC--CCHHHHHHHH---CCCCc
Confidence            877  99999998 9999999999999998568888899999998876 99999888654  4666666654   24689


Q ss_pred             cEEEEcCCCHHHHHHHHHHcccCCEEEEEcCC
Q 020768          256 DVSFDCAGFNKTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       256 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      |++||++|+. .+..++++|+++|+++.+|..
T Consensus       226 d~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~  256 (345)
T cd08293         226 DVYFDNVGGE-ISDTVISQMNENSHIILCGQI  256 (345)
T ss_pred             eEEEECCCcH-HHHHHHHHhccCCEEEEEeee
Confidence            9999999984 679999999999999999853

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=5.7e-33  Score=255.23  Aligned_cols=245  Identities=20%  Similarity=0.181  Sum_probs=198.5

Q ss_pred             CCeEEEEecC----CCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccce--eEEEEEeCCCCCCCCCCCE
Q 020768           27 NTLKIQPFEL----PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHEC--AGVIEKVGSEVKTLVPGDR  100 (321)
Q Consensus        27 ~~l~~~e~~~----p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~--vG~V~~vG~~v~~~~~Gd~  100 (321)
                      ..|++++.+.    |+|+++||||||+++++|+.|++.+.|....  ....|+++|+++  .|.+..+|++++.|++||+
T Consensus        19 ~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~--~~~~p~~~g~~~~g~~~~~~v~~~v~~~~vGd~   96 (338)
T cd08295          19 SDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDS--LYLPPFKPGEVITGYGVAKVVDSGNPDFKVGDL   96 (338)
T ss_pred             cceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCcc--ccCCCcCCCCeEeccEEEEEEecCCCCCCCCCE
Confidence            5789998887    8899999999999999999999988874321  124578899754  4555567888999999999


Q ss_pred             EEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecC-CcEEECC-CCCChh-hhc-cchhhHHHHHHHH-
Q 020768          101 VALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA-DLCFKLP-DNVSLE-EGA-MCEPLSVGLHACR-  175 (321)
Q Consensus       101 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~-~~~~~ip-~~~~~~-~aa-~~~~~~~a~~~l~-  175 (321)
                      |..+                               |+|+||+++++ ..++++| +++++. +++ +..++.|||+++. 
T Consensus        97 V~~~-------------------------------g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~  145 (338)
T cd08295          97 VWGF-------------------------------TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYE  145 (338)
T ss_pred             EEec-------------------------------CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHH
Confidence            9753                               78999999999 7999995 568775 555 4457889999984 


Q ss_pred             HcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH-cCCCeEEecCCCcccHHHHHHHHHHHhCC
Q 020768          176 RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGADNIVKVSTNLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       176 ~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~~~~~~~~~~  253 (321)
                      .+++++|++|||+|+ |++|++++|+|+.+|+ .++++++++++.+++++ +|++.++++.+. .++.+.++++   .+.
T Consensus       146 ~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~-~~~~~~i~~~---~~~  220 (338)
T cd08295         146 VCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLKNKLGFDDAFNYKEE-PDLDAALKRY---FPN  220 (338)
T ss_pred             hcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCceeEEcCCc-ccHHHHHHHh---CCC
Confidence            588999999999998 9999999999999999 68888899999999988 999998885432 3555555543   246


Q ss_pred             CccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC-c-----cccchhhhccceEEEEeeh
Q 020768          254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE-M-----TVPLTPAAARYLIYSFLFH  310 (321)
Q Consensus       254 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-----~~~~~~~~~k~~~i~g~~~  310 (321)
                      ++|++||++|+ ..+..++++++++|+++.+|..... .     ..+...++++++++.|++.
T Consensus       221 gvd~v~d~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~  282 (338)
T cd08295         221 GIDIYFDNVGG-KMLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLV  282 (338)
T ss_pred             CcEEEEECCCH-HHHHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEe
Confidence            89999999997 6889999999999999999965432 1     1345667889999999664

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=7.1e-33  Score=253.27  Aligned_cols=249  Identities=21%  Similarity=0.206  Sum_probs=200.2

Q ss_pred             hceeEEEccC-------CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeC
Q 020768           17 VNMAAWLLGV-------NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG   89 (321)
Q Consensus        17 ~~~a~~~~~~-------~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG   89 (321)
                      +||+.++..+       ..+++++.|.|+|+++||+|||.++++|+.|.+....    .  ..+|.++|+|++|+|++  
T Consensus         2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~----~--~~~p~v~G~e~~G~V~~--   73 (329)
T cd08294           2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR----L--NEGDTMIGTQVAKVIES--   73 (329)
T ss_pred             CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc----C--CCCCcEecceEEEEEec--
Confidence            5788777641       4589999999999999999999999999887542111    1  24588999999999985  


Q ss_pred             CCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCC---cEEECCCCCC------hhh
Q 020768           90 SEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD---LCFKLPDNVS------LEE  160 (321)
Q Consensus        90 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~---~~~~ip~~~~------~~~  160 (321)
                       .++.|++||+|+..                               ++|++|+.++.+   .++++|++++      ...
T Consensus        74 -~~~~~~~Gd~V~~~-------------------------------~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~  121 (329)
T cd08294          74 -KNSKFPVGTIVVAS-------------------------------FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLAL  121 (329)
T ss_pred             -CCCCCCCCCEEEee-------------------------------CCeeeEEEECCccccceEECCccccccCChHHHH
Confidence             45689999999753                               578999999999   9999999988      222


Q ss_pred             hccchhhHHHHHHH-HHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcc
Q 020768          161 GAMCEPLSVGLHAC-RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQ  238 (321)
Q Consensus       161 aa~~~~~~~a~~~l-~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~  238 (321)
                      +++..++.+||+++ +..++++|++|||+|+ |++|++++|+|+++|+ .++++++++++.++++++|++.++++.+  .
T Consensus       122 a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~~l~~~Ga~~vi~~~~--~  198 (329)
T cd08294         122 GVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVAWLKELGFDAVFNYKT--V  198 (329)
T ss_pred             HhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC--c
Confidence            33445888999998 5688999999999997 9999999999999999 6888889999999999999999988653  4


Q ss_pred             cHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-Cc------cccchhhhccceEEEEeehh
Q 020768          239 DIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EM------TVPLTPAAARYLIYSFLFHF  311 (321)
Q Consensus       239 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~------~~~~~~~~~k~~~i~g~~~~  311 (321)
                      ++.+.++++   .+.++|++||++|+ ..+...+++++++|+++.+|.... ..      ......++++++++.|++..
T Consensus       199 ~~~~~v~~~---~~~gvd~vld~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  274 (329)
T cd08294         199 SLEEALKEA---APDGIDCYFDNVGG-EFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVY  274 (329)
T ss_pred             cHHHHHHHH---CCCCcEEEEECCCH-HHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhh
Confidence            566655543   24689999999997 688999999999999999985322 11      12234577899999998754


Q ss_pred             H
Q 020768          312 F  312 (321)
Q Consensus       312 ~  312 (321)
                      .
T Consensus       275 ~  275 (329)
T cd08294         275 R  275 (329)
T ss_pred             h
Confidence            3

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=8.5e-33  Score=252.72  Aligned_cols=240  Identities=19%  Similarity=0.212  Sum_probs=193.7

Q ss_pred             cCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEc
Q 020768           25 GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALE  104 (321)
Q Consensus        25 ~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~  104 (321)
                      ++..++++|.|.|.|+++||||||.++++|+.|.   .|.+..   ...|.++|.|++|+|++.|+   .|++||+|+..
T Consensus        15 ~~~~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~---~g~~~~---~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~   85 (325)
T TIGR02825        15 TDSDFELKTVELPPLNNGEVLLEALFLSVDPYMR---VAAKRL---KEGDTMMGQQVARVVESKNV---ALPKGTIVLAS   85 (325)
T ss_pred             CCCceEEEeccCCCCCCCcEEEEEEEEecCHHHh---cccCcC---CCCCcEecceEEEEEEeCCC---CCCCCCEEEEe
Confidence            4567999999999999999999999999999654   333211   23478999999999999763   59999999863


Q ss_pred             CCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEEC----CCCCChhhh-ccc-hhhHHHHHHH-HHc
Q 020768          105 PGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKL----PDNVSLEEG-AMC-EPLSVGLHAC-RRA  177 (321)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~i----p~~~~~~~a-a~~-~~~~~a~~~l-~~~  177 (321)
                                                     ++|++|+.++.+.+.++    |+++++++| +.+ .++.|||+++ +.+
T Consensus        86 -------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~  134 (325)
T TIGR02825        86 -------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEIC  134 (325)
T ss_pred             -------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHh
Confidence                                           56899999999988887    899999886 444 5789999987 568


Q ss_pred             CCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768          178 NIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       178 ~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      ++++|++|||+|+ |++|++++|+|+.+|+ +++++++++++.++++++|++.++++++. .++.+.++..   .+.++|
T Consensus       135 ~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~-~~~~~~~~~~---~~~gvd  209 (325)
T TIGR02825       135 GVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKTV-KSLEETLKKA---SPDGYD  209 (325)
T ss_pred             CCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEecccc-ccHHHHHHHh---CCCCeE
Confidence            8999999999997 9999999999999999 68888899999999999999999886532 2344444332   356899


Q ss_pred             EEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-----Ccc--ccchhhhccceEEEEeeh
Q 020768          257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-----EMT--VPLTPAAARYLIYSFLFH  310 (321)
Q Consensus       257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~--~~~~~~~~k~~~i~g~~~  310 (321)
                      ++||++|+ ..+..++++++++|+++.+|....     ..+  .....++++++++.|+..
T Consensus       210 vv~d~~G~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  269 (325)
T TIGR02825       210 CYFDNVGG-EFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIV  269 (325)
T ss_pred             EEEECCCH-HHHHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEe
Confidence            99999997 577999999999999999996432     111  123346778999999874

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.1e-32  Score=242.48  Aligned_cols=261  Identities=37%  Similarity=0.576  Sum_probs=217.0

Q ss_pred             cEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCC
Q 020768           43 DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNL  122 (321)
Q Consensus        43 evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~  122 (321)
                      ||+|||.++++|+.|+..+.+...  ....+|.++|||++|+|+++|++++.|++||+|+..+..+|++|++|..    .
T Consensus         1 ~v~i~v~~~~i~~~d~~~~~g~~~--~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~   74 (271)
T cd05188           1 EVLVRVEAAGLCGTDLHIRRGGYP--PPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----L   74 (271)
T ss_pred             CeEEEEEEEEecchhHHHHcCCCC--cCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----h
Confidence            689999999999999998887542  1245688999999999999999999999999999999999999999997    6


Q ss_pred             CCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHHHHHH-cCCCCCCEEEEEcCChhHHHHHHH
Q 020768          123 CPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHACRR-ANIGPETNVLIMGAGPIGLVTMLG  200 (321)
Q Consensus       123 ~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~~l~~-~~~~~g~~vlI~Gag~vG~~a~ql  200 (321)
                      |+.....+ ....|+|++|+.++.+.++++|+++++.+++.+ .++.+||++++. ..++++++|||+|+|++|++++++
T Consensus        75 ~~~~~~~~-~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~~~~~~  153 (271)
T cd05188          75 CPGGGILG-EGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQL  153 (271)
T ss_pred             CCCCCEec-cccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHH
Confidence            76655433 456899999999999999999999999998876 588999999866 455899999999995599999999


Q ss_pred             HHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCE
Q 020768          201 ARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGK  280 (321)
Q Consensus       201 a~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~  280 (321)
                      ++..|. .++++++++++.++++++|.+.+++...  .++.+.+.   ...+.++|++||+++.....+.++++++++|+
T Consensus       154 a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~---~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~  227 (271)
T cd05188         154 AKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKE--EDLEEELR---LTGGGGADVVIDAVGGPETLAQALRLLRPGGR  227 (271)
T ss_pred             HHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCCc--CCHHHHHH---HhcCCCCCEEEECCCCHHHHHHHHHhcccCCE
Confidence            999997 6888889999999999999888776433  34444443   23467899999999985688999999999999


Q ss_pred             EEEEcCCCCCccc-cchhhhccceEEEEeehhHHHhh
Q 020768          281 VCLVGMGHLEMTV-PLTPAAARYLIYSFLFHFFLIVL  316 (321)
Q Consensus       281 ~v~~g~~~~~~~~-~~~~~~~k~~~i~g~~~~~~~~~  316 (321)
                      ++.+|........ ....++.|++++.|+..+.+..+
T Consensus       228 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (271)
T cd05188         228 IVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTREDF  264 (271)
T ss_pred             EEEEccCCCCCCcccHHHHHhcceEEEEeecCCHHHH
Confidence            9999976543332 24457889999999998877554

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=100.00  E-value=1.6e-32  Score=252.32  Aligned_cols=264  Identities=24%  Similarity=0.279  Sum_probs=212.7

Q ss_pred             ceeEEEccCCC----eEEEEecCCCCCC-CcEEEEEeEeecccccHhhhhccccCCcC--CCCCcccccceeEEEEEeCC
Q 020768           18 NMAAWLLGVNT----LKIQPFELPSLGP-YDVLVRMKAVGICGSDVHYLKTLRCADFV--VKEPMVIGHECAGVIEKVGS   90 (321)
Q Consensus        18 ~~a~~~~~~~~----l~~~e~~~p~~~~-~evlVkv~a~~l~~~D~~~~~g~~~~~~~--~~~p~~~G~e~vG~V~~vG~   90 (321)
                      |||+++.+.+.    +.+++.|.|.|.+ +||+||+.++++|+.|+..+.|.......  ...|.++|||++|+|+++|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~   80 (341)
T cd08290           1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS   80 (341)
T ss_pred             CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence            78999986543    8999999999987 99999999999999999988775421110  11577999999999999999


Q ss_pred             CCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHH
Q 020768           91 EVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSV  169 (321)
Q Consensus        91 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~  169 (321)
                      +++.|++||+|+..+.                           ..|+|++|+.++.+.++++|+++++.+++.+. ...+
T Consensus        81 ~v~~~~~Gd~V~~~~~---------------------------~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~t  133 (341)
T cd08290          81 GVKSLKPGDWVIPLRP---------------------------GLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCT  133 (341)
T ss_pred             CCCCCCCCCEEEecCC---------------------------CCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHH
Confidence            9999999999987521                           25999999999999999999999998888654 7788


Q ss_pred             HHHHHH-HcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCCh----hHHHHHHHcCCCeEEecCCC-cccHHH
Q 020768          170 GLHACR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD----YRLSVAKELGADNIVKVSTN-LQDIAE  242 (321)
Q Consensus       170 a~~~l~-~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~----~~~~~~~~~g~~~vi~~~~~-~~~~~~  242 (321)
                      +|+++. ...+++|++|||+|+ |++|++++|+|++.|.+ ++++.+++    ++.++++++|++.+++.... ..++.+
T Consensus       134 a~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  212 (341)
T cd08290         134 AYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIK-TINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATE  212 (341)
T ss_pred             HHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCe-EEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHH
Confidence            999885 478899999999988 99999999999999995 55555554    67888889999998875431 014444


Q ss_pred             HHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-CccccchhhhccceEEEEeehhHH
Q 020768          243 EVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARYLIYSFLFHFFL  313 (321)
Q Consensus       243 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~~~  313 (321)
                      .+..+.   ++++|++|||+|+. .+...+++++++|+++.+|.... ...++...++.+++++.+...+.+
T Consensus       213 ~i~~~~---~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (341)
T cd08290         213 LLKSAP---GGRPKLALNCVGGK-SATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRW  280 (341)
T ss_pred             HHHHHc---CCCceEEEECcCcH-hHHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHH
Confidence            444432   23799999999984 67789999999999999985433 345666677889999999887654

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=1.9e-32  Score=251.20  Aligned_cols=246  Identities=21%  Similarity=0.295  Sum_probs=203.8

Q ss_pred             CCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcC
Q 020768           26 VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEP  105 (321)
Q Consensus        26 ~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~  105 (321)
                      ++.++..|+|.|.|+++||+|||.++++|+.|+..+.+....   ..+|.++|+|++|+|+++|++++.|++||+|+...
T Consensus        14 ~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~   90 (336)
T TIGR02817        14 PDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPE---AGQPKILGWDAAGVVVAVGDEVTLFKPGDEVWYAG   90 (336)
T ss_pred             cccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCC---CCCCcccceeeEEEEEEeCCCCCCCCCCCEEEEcC
Confidence            456888999999999999999999999999999888764321   34678999999999999999999999999998641


Q ss_pred             CccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHHH-HHcCCCC--
Q 020768          106 GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGP--  181 (321)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~--  181 (321)
                      .                         ....|+|++|+.++++.++++|+++++++++.++ ...+||+++ +..++++  
T Consensus        91 ~-------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~  145 (336)
T TIGR02817        91 D-------------------------IDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPV  145 (336)
T ss_pred             C-------------------------CCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCC
Confidence            0                         1235999999999999999999999999988654 677889888 4577776  


Q ss_pred             ---CCEEEEEcC-ChhHHHHHHHHHHc-CCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768          182 ---ETNVLIMGA-GPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       182 ---g~~vlI~Ga-g~vG~~a~qla~~~-g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d  256 (321)
                         |++|||+|+ |++|++++|+|+++ |+ .|+++.+++++.++++++|++.+++++.   ++.+.+.+   ..+.++|
T Consensus       146 ~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~g~~~~~~~~~---~~~~~i~~---~~~~~vd  218 (336)
T TIGR02817       146 AGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLELGAHHVIDHSK---PLKAQLEK---LGLEAVS  218 (336)
T ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHcCCCEEEECCC---CHHHHHHH---hcCCCCC
Confidence               999999997 99999999999998 98 6888888899999999999999887542   45555554   2356899


Q ss_pred             EEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEee
Q 020768          257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLF  309 (321)
Q Consensus       257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~  309 (321)
                      +++|++++...+...+++++++|+++.++..   ..++..++..+++++.+..
T Consensus       219 ~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~---~~~~~~~~~~~~~~~~~~~  268 (336)
T TIGR02817       219 YVFSLTHTDQHFKEIVELLAPQGRFALIDDP---AELDISPFKRKSISLHWEF  268 (336)
T ss_pred             EEEEcCCcHHHHHHHHHHhccCCEEEEEccc---ccccchhhhhcceEEEEEE
Confidence            9999987778899999999999999988532   3566666776778777643

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=100.00  E-value=1.5e-31  Score=243.78  Aligned_cols=262  Identities=25%  Similarity=0.270  Sum_probs=213.1

Q ss_pred             ceeEEEccC---CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768           18 NMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (321)
Q Consensus        18 ~~a~~~~~~---~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~   94 (321)
                      ||+++++++   ..+++.+.+.|.+.++||+|||.++++|+.|+..+.|..........|.++|||++|+|+++|++++.
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~   80 (324)
T cd08244           1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP   80 (324)
T ss_pred             CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence            688888753   45778888888889999999999999999999888775432222345789999999999999999999


Q ss_pred             CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHH
Q 020768           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (321)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~  173 (321)
                      +++||+|+....                          ...|+|++|+.++.++++++|+++++.+++.+. .+.++|..
T Consensus        81 ~~~Gd~V~~~~~--------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~  134 (324)
T cd08244          81 AWLGRRVVAHTG--------------------------RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTALGL  134 (324)
T ss_pred             CCCCCEEEEccC--------------------------CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHHHH
Confidence            999999987521                          136999999999999999999999999887554 66677655


Q ss_pred             HHHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhC
Q 020768          174 CRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~  252 (321)
                      ++.+.++++++++|+|+ |++|++++++|+.+|+ .++++++++++.+.++++|++.+++..+  .++.+.+.+.  ..+
T Consensus       135 ~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~--~~~  209 (324)
T cd08244         135 LDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVAVDYTR--PDWPDQVREA--LGG  209 (324)
T ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEecCC--ccHHHHHHHH--cCC
Confidence            57788999999999997 9999999999999999 5888888999999999999988776543  3455555443  235


Q ss_pred             CCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-CccccchhhhccceEEEEeehh
Q 020768          253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARYLIYSFLFHF  311 (321)
Q Consensus       253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~  311 (321)
                      .++|+++|++|+. ..+.++++++++|+++.+|.... ...++...++.+++++.++...
T Consensus       210 ~~~d~vl~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (324)
T cd08244         210 GGVTVVLDGVGGA-IGRAALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGV  268 (324)
T ss_pred             CCceEEEECCChH-hHHHHHHHhccCcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecc
Confidence            6799999999975 66899999999999999996543 2355655677899999987653

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-31  Score=241.95  Aligned_cols=259  Identities=23%  Similarity=0.318  Sum_probs=212.4

Q ss_pred             hceeEEEccCC---CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCC
Q 020768           17 VNMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (321)
Q Consensus        17 ~~~a~~~~~~~---~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~   93 (321)
                      ||||+++.+++   .+++++.+.|.+.++|++|||.++++|+.|.....+.....  ...|.++|||++|+|+++|++++
T Consensus         1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~--~~~~~~~g~e~~G~v~~vG~~v~   78 (334)
T PTZ00354          1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPP--PGSSEILGLEVAGYVEDVGSDVK   78 (334)
T ss_pred             CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCC--CCCCcccceeeEEEEEEeCCCCC
Confidence            69999998554   57788888888999999999999999999998887643221  34467899999999999999999


Q ss_pred             CCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHH
Q 020768           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLH  172 (321)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~  172 (321)
                      .+++||+|+...                            .+|+|++|+.++.++++++|+++++.+++.+ .++.++++
T Consensus        79 ~~~~Gd~V~~~~----------------------------~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~  130 (334)
T PTZ00354         79 RFKEGDRVMALL----------------------------PGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQ  130 (334)
T ss_pred             CCCCCCEEEEec----------------------------CCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHH
Confidence            999999998641                            3589999999999999999999999887755 47788998


Q ss_pred             HHHH-cCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHH
Q 020768          173 ACRR-ANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA  250 (321)
Q Consensus       173 ~l~~-~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~  250 (321)
                      ++.. ..+++|++|+|+|+ |++|++++++|+++|.+ ++++.+++++.++++++|++.+++.... .++.+.+.++.  
T Consensus       131 ~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~--  206 (334)
T PTZ00354        131 LLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAA-TIITTSSEEKVDFCKKLAAIILIRYPDE-EGFAPKVKKLT--  206 (334)
T ss_pred             HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHcCCcEEEecCCh-hHHHHHHHHHh--
Confidence            8854 78999999999997 99999999999999994 5667888999999999999888775331 12455554432  


Q ss_pred             hCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-Ccc-ccchhhhccceEEEEeeh
Q 020768          251 MGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMT-VPLTPAAARYLIYSFLFH  310 (321)
Q Consensus       251 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~-~~~~~~~~k~~~i~g~~~  310 (321)
                      .+.++|++||++++ ..+...+++++++|+++.+|...+ ... +++..++.++.++.++..
T Consensus       207 ~~~~~d~~i~~~~~-~~~~~~~~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (334)
T PTZ00354        207 GEKGVNLVLDCVGG-SYLSETAEVLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTL  267 (334)
T ss_pred             CCCCceEEEECCch-HHHHHHHHHhccCCeEEEEecCCCCcccccCHHHHHhhCCEEEeeec
Confidence            35689999999986 688999999999999999996543 222 777777788889988754

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=5.2e-31  Score=238.96  Aligned_cols=250  Identities=30%  Similarity=0.414  Sum_probs=206.4

Q ss_pred             ccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhh-hccccCCcCCCCCcccccceeEEEEEeCCCCCCCCCCCEEE
Q 020768           24 LGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYL-KTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVA  102 (321)
Q Consensus        24 ~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~-~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd~V~  102 (321)
                      .+++.+++++++.|+++++||+|||.++++|+.|+..+ .+..... ...+|.++|+|++|+|+++|++++.+++||+|+
T Consensus         2 ~~~~~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~-~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~   80 (312)
T cd08269           2 TGPGRFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFV-YPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVA   80 (312)
T ss_pred             CCCCeeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcc-cCCCCcccceeeEEEEEEECCCCcCCCCCCEEE
Confidence            35678999999999999999999999999999999887 5543211 123478999999999999999999999999998


Q ss_pred             EcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHHHHHHcCCCC
Q 020768          103 LEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHACRRANIGP  181 (321)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~~l~~~~~~~  181 (321)
                      ..                             ..|+|++|+.++++.++++|+++  ..++.. .++++++++++..++++
T Consensus        81 ~~-----------------------------~~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~~~~~~~  129 (312)
T cd08269          81 GL-----------------------------SGGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFRRGWIRA  129 (312)
T ss_pred             Ee-----------------------------cCCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHHhcCCCC
Confidence            75                             24899999999999999999998  233333 57788888888888999


Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  261 (321)
                      +++++|+|+|++|++++|+|+++|++.++++.+++++.++++++|++.+++.+  ..++.+.+.++.  .+.++|+++||
T Consensus       130 ~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~l~~~~--~~~~vd~vld~  205 (312)
T cd08269         130 GKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDD--SEAIVERVRELT--GGAGADVVIEA  205 (312)
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCC--CcCHHHHHHHHc--CCCCCCEEEEC
Confidence            99999998899999999999999995488888888999999999998877632  345666666543  35689999999


Q ss_pred             CCCHHHHHHHHHHcccCCEEEEEcCCC-CCccccchhhhccceEEEEee
Q 020768          262 AGFNKTMSTALSATRAGGKVCLVGMGH-LEMTVPLTPAAARYLIYSFLF  309 (321)
Q Consensus       262 ~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~k~~~i~g~~  309 (321)
                      +|+.......+++|+++|+++.+|... ...++++..+..+++++.++.
T Consensus       206 ~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  254 (312)
T cd08269         206 VGHQWPLDLAGELVAERGRLVIFGYHQDGPRPVPFQTWNWKGIDLINAV  254 (312)
T ss_pred             CCCHHHHHHHHHHhccCCEEEEEccCCCCCcccCHHHHhhcCCEEEEec
Confidence            988778899999999999999999653 234556666778899888875

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.2e-30  Score=238.69  Aligned_cols=279  Identities=29%  Similarity=0.355  Sum_probs=224.3

Q ss_pred             ceeEEEcc---CCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768           18 NMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (321)
Q Consensus        18 ~~a~~~~~---~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~   94 (321)
                      |||++++.   ...+++++.+.|.++++|++||+.++++|++|+....+.....  ...|.++|||++|+|+++|+++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~v~~~G~~~~~   78 (336)
T cd08276           1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPP--VKDPLIPLSDGAGEVVAVGEGVTR   78 (336)
T ss_pred             CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCC--CCCCcccccceeEEEEEeCCCCcC
Confidence            78888873   3678898999888999999999999999999999887654322  346789999999999999999999


Q ss_pred             CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHH
Q 020768           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (321)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~  173 (321)
                      +++||+|+..+...|..+.++      .|......+ ...+|+|++|+.++.+.++++|+++++.+++.+. ++.++|++
T Consensus        79 ~~~Gd~V~~~~~~~~~~~~~~------~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~  151 (336)
T cd08276          79 FKVGDRVVPTFFPNWLDGPPT------AEDEASALG-GPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNA  151 (336)
T ss_pred             CCCCCEEEEeccccccccccc------ccccccccc-cccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHH
Confidence            999999999766565554443      333222222 2357999999999999999999999998887654 67788888


Q ss_pred             HH-HcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhC
Q 020768          174 CR-RANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       174 l~-~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~  252 (321)
                      +. ...+++|++++|+|+|++|++++++|++.|+ .+++++.++++.+.++++|.+.+++... ..++.+.+.++.  .+
T Consensus       152 l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~--~~  227 (336)
T cd08276         152 LFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINYRT-TPDWGEEVLKLT--GG  227 (336)
T ss_pred             HHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcCCc-ccCHHHHHHHHc--CC
Confidence            74 4789999999999879999999999999999 5888888999999999999988876532 144555555542  35


Q ss_pred             CCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC-ccccchhhhccceEEEEeeh
Q 020768          253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE-MTVPLTPAAARYLIYSFLFH  310 (321)
Q Consensus       253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~k~~~i~g~~~  310 (321)
                      .++|++||+++. ..+..++++++++|+++.+|..... ..++...++.|++++.++..
T Consensus       228 ~~~d~~i~~~~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (336)
T cd08276         228 RGVDHVVEVGGP-GTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAV  285 (336)
T ss_pred             CCCcEEEECCCh-HHHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEec
Confidence            689999999985 6788999999999999999965442 34555667889999999764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=100.00  E-value=6.7e-31  Score=239.60  Aligned_cols=259  Identities=21%  Similarity=0.227  Sum_probs=206.2

Q ss_pred             ceeEEEccCC---CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768           18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (321)
Q Consensus        18 ~~a~~~~~~~---~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~   94 (321)
                      ||++++.+++   .+++++.|.|.++++||+|||.++++|++|+..+.|....  ...+|.++|||++|+|+++  +++.
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~--~~~~   76 (325)
T cd05280           1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGV--TRNYPHTPGIDAAGTVVSS--DDPR   76 (325)
T ss_pred             CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCC--CCCCCCccCcccEEEEEEe--CCCC
Confidence            7899998765   7999999999999999999999999999999988775421  1345789999999999998  5678


Q ss_pred             CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHH
Q 020768           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (321)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~  173 (321)
                      |++||+|+....                     +.+ ...+|+|++|+.++++.++++|+++++.+++.+. .+.+++++
T Consensus        77 ~~~Gd~V~~~~~---------------------~~g-~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~  134 (325)
T cd05280          77 FREGDEVLVTGY---------------------DLG-MNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALS  134 (325)
T ss_pred             CCCCCEEEEccc---------------------ccC-CCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHH
Confidence            999999987521                     001 1246999999999999999999999999988664 56677777


Q ss_pred             HHH---cCCC-CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHH
Q 020768          174 CRR---ANIG-PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQ  248 (321)
Q Consensus       174 l~~---~~~~-~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~  248 (321)
                      ++.   ..+. .+++|+|+|+ |++|++++|+|+++|+ .|+++++++++.++++++|++.+++...    ......+. 
T Consensus       135 l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~-  208 (325)
T cd05280         135 VHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASEVLDRED----LLDESKKP-  208 (325)
T ss_pred             HHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEcchh----HHHHHHHH-
Confidence            643   3345 3579999998 9999999999999999 5888889999999999999988876432    11112121 


Q ss_pred             HHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-CccccchhhhccceEEEEeeh
Q 020768          249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARYLIYSFLFH  310 (321)
Q Consensus       249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~  310 (321)
                       ...+++|++||++|+ ..+..++++++++|+++.+|.... +..++...++.|++++.++..
T Consensus       209 -~~~~~~d~vi~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (325)
T cd05280         209 -LLKARWAGAIDTVGG-DVLANLLKQTKYGGVVASCGNAAGPELTTTVLPFILRGVSLLGIDS  269 (325)
T ss_pred             -hcCCCccEEEECCch-HHHHHHHHhhcCCCEEEEEecCCCCccccccchheeeeeEEEEEEe
Confidence             224579999999997 688999999999999999996543 335566666689999998654

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=100.00  E-value=1.3e-30  Score=238.00  Aligned_cols=258  Identities=20%  Similarity=0.222  Sum_probs=203.1

Q ss_pred             ceeEEEccCC---CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768           18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (321)
Q Consensus        18 ~~a~~~~~~~---~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~   94 (321)
                      |||.++.+++   .++++++|.|.|+++||+||+.++++|++|.....+..  .....+|.++|||++|+|++.  +++.
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~--~~~~~~~~~~g~e~~G~V~~~--~~~~   76 (326)
T cd08289           1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGG--KIVKRYPFIPGIDLAGTVVES--NDPR   76 (326)
T ss_pred             CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCc--cccCCCCcCcccceeEEEEEc--CCCC
Confidence            7888887543   48889999999999999999999999999987654211  111345889999999999995  4578


Q ss_pred             CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHH
Q 020768           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (321)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~  173 (321)
                      |++||+|+..+..                     . +...+|+|++|+.++++.++++|+++++.+++.++ .+.+++.+
T Consensus        77 ~~~Gd~V~~~~~~---------------------~-~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~  134 (326)
T cd08289          77 FKPGDEVIVTSYD---------------------L-GVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALS  134 (326)
T ss_pred             CCCCCEEEEcccc---------------------c-CCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHH
Confidence            9999999875320                     0 11347999999999999999999999999988665 45567776


Q ss_pred             HHH---cCCC-CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHH
Q 020768          174 CRR---ANIG-PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQ  248 (321)
Q Consensus       174 l~~---~~~~-~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~  248 (321)
                      ++.   ..+. .+++|||+|+ |++|++++|+|+++|+ .++++++++++.++++++|++.+++.++  . ..+.+.++ 
T Consensus       135 l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~--~-~~~~~~~~-  209 (326)
T cd08289         135 IHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKEVIPREE--L-QEESIKPL-  209 (326)
T ss_pred             HHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCEEEcchh--H-HHHHHHhh-
Confidence            643   3333 4789999998 9999999999999999 5888889999999999999988876432  1 22333333 


Q ss_pred             HHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-CccccchhhhccceEEEEee
Q 020768          249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARYLIYSFLF  309 (321)
Q Consensus       249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~  309 (321)
                        .+.++|++||++|+ ..+...+++++++|+++.+|.... ..++++..++.+++++.++.
T Consensus       210 --~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~  268 (326)
T cd08289         210 --EKQRWAGAVDPVGG-KTLAYLLSTLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGID  268 (326)
T ss_pred             --ccCCcCEEEECCcH-HHHHHHHHHhhcCCEEEEEeecCCCCCCcchhhhhhccceEEEEE
Confidence              25679999999997 688999999999999999997643 23444666778999999974

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.2e-30  Score=234.20  Aligned_cols=244  Identities=25%  Similarity=0.279  Sum_probs=202.6

Q ss_pred             ceeEEEcc--CCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCC
Q 020768           18 NMAAWLLG--VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (321)
Q Consensus        18 ~~a~~~~~--~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~   95 (321)
                      ||++++.+  +..+++++.|.|.++++|++||+.++++|+.|......       ...|.++|||++|+|+++|++++.|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~-------~~~~~~~g~e~~G~v~~~G~~v~~~   73 (305)
T cd08270           1 MRALVVDPDAPLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAE-------RPDGAVPGWDAAGVVERAAADGSGP   73 (305)
T ss_pred             CeEEEEccCCCceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhcc-------CCCCCcccceeEEEEEEeCCCCCCC
Confidence            67887765  45688889999999999999999999999999987652       2236789999999999999999999


Q ss_pred             CCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHHH
Q 020768           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC  174 (321)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l  174 (321)
                      ++||+|+..                            ..+|+|++|+.++.++++++|+++++.+++.++ .+.+||+++
T Consensus        74 ~~Gd~V~~~----------------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~  125 (305)
T cd08270          74 AVGARVVGL----------------------------GAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRAL  125 (305)
T ss_pred             CCCCEEEEe----------------------------cCCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHH
Confidence            999999864                            135999999999999999999999999888665 678899998


Q ss_pred             HHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCC
Q 020768          175 RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       175 ~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~  253 (321)
                      ......+|++++|+|+ |++|++++++|++.|+ .++.+++++++.+.++++|++..++...          ++   .++
T Consensus       126 ~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~----------~~---~~~  191 (305)
T cd08270         126 RRGGPLLGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVGGS----------EL---SGA  191 (305)
T ss_pred             HHhCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEeccc----------cc---cCC
Confidence            7655556999999998 9999999999999999 6888888999999999999876554211          11   134


Q ss_pred             CccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-Cccccchhhhc--cceEEEEeehh
Q 020768          254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAA--RYLIYSFLFHF  311 (321)
Q Consensus       254 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~--k~~~i~g~~~~  311 (321)
                      ++|+++|++|+ ..+...+++++++|+++.+|.... ...++...+..  ++.++.++...
T Consensus       192 ~~d~vl~~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (305)
T cd08270         192 PVDLVVDSVGG-PQLARALELLAPGGTVVSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLY  251 (305)
T ss_pred             CceEEEECCCc-HHHHHHHHHhcCCCEEEEEeccCCCcccccHHHHhcccccceEEEEEcc
Confidence            79999999997 578999999999999999996543 34566666655  79999988754

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=99.98  E-value=3.8e-30  Score=234.75  Aligned_cols=257  Identities=21%  Similarity=0.237  Sum_probs=201.8

Q ss_pred             eeEEEcc---CCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCC
Q 020768           19 MAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (321)
Q Consensus        19 ~a~~~~~---~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~   95 (321)
                      ||+++..   +..++++++|.|.++++||+|||.++++|+.|+..+.|....  ....|.++|||++|+|+.  .+++.|
T Consensus         1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~V~~--~~~~~~   76 (323)
T TIGR02823         1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGV--VRSYPMIPGIDAAGTVVS--SEDPRF   76 (323)
T ss_pred             CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCC--CCCCCccceeeeEEEEEe--cCCCCC
Confidence            5677763   347899999999999999999999999999999888775421  124588999999999998  567789


Q ss_pred             CCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHHH
Q 020768           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC  174 (321)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l  174 (321)
                      ++||+|+..+..                     . +...+|++++|+.++.+.++++|+++++.+++.+. .+.+++.++
T Consensus        77 ~~Gd~V~~~~~~---------------------~-~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~  134 (323)
T TIGR02823        77 REGDEVIVTGYG---------------------L-GVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSV  134 (323)
T ss_pred             CCCCEEEEccCC---------------------C-CCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHH
Confidence            999999875310                     0 01246999999999999999999999999888665 556666665


Q ss_pred             ---HHcCCCCCC-EEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHH
Q 020768          175 ---RRANIGPET-NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       175 ---~~~~~~~g~-~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                         ....+.+|+ +|+|+|+ |.+|++++|+|+++|+ .++++..++++.++++++|++.+++..+  .+  ..++.+  
T Consensus       135 ~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~--~~--~~~~~~--  207 (323)
T TIGR02823       135 MALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEVIDRED--LS--PPGKPL--  207 (323)
T ss_pred             HHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEEEcccc--HH--HHHHHh--
Confidence               334588998 9999998 9999999999999999 5777777788889999999988776432  11  122222  


Q ss_pred             HhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-CccccchhhhccceEEEEeeh
Q 020768          250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARYLIYSFLFH  310 (321)
Q Consensus       250 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~  310 (321)
                       .+.++|.++||+|+ ..+..++++++++|+++.+|.... ...++...++.+++++.++..
T Consensus       208 -~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (323)
T TIGR02823       208 -EKERWAGAVDTVGG-HTLANVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDS  267 (323)
T ss_pred             -cCCCceEEEECccH-HHHHHHHHHhCCCCEEEEEcccCCCCccccHHHHhhcceEEEEEec
Confidence             23459999999997 578899999999999999997643 234445667789999999643

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=99.98  E-value=3.6e-30  Score=234.55  Aligned_cols=250  Identities=26%  Similarity=0.322  Sum_probs=207.1

Q ss_pred             CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCc
Q 020768           28 TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI  107 (321)
Q Consensus        28 ~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~~~  107 (321)
                      .+++++.|.|.++++||+|||.++++|+.|...+.+.....  ..+|.++|||++|+|+++|++++.+++||+|+..+  
T Consensus        13 ~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~--~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~--   88 (323)
T cd05282          13 VLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSR--PPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLG--   88 (323)
T ss_pred             eEEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCC--CCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeC--
Confidence            67888999999999999999999999999998877654221  34578999999999999999999999999998752  


Q ss_pred             cCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHHHHH-HcCCCCCCEE
Q 020768          108 SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHACR-RANIGPETNV  185 (321)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~v  185 (321)
                                                ..|+|++|+.++...++++|+++++.+++.+ ....++|+++. ...+.+|++|
T Consensus        89 --------------------------~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~v  142 (323)
T cd05282          89 --------------------------GEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWV  142 (323)
T ss_pred             --------------------------CCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEE
Confidence                                      1489999999999999999999999887754 36677888874 4678999999


Q ss_pred             EEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCC
Q 020768          186 LIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGF  264 (321)
Q Consensus       186 lI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  264 (321)
                      +|+|+ |.+|++++++|+++|+ .++++.+++++.++++++|++.+++...  .++.+.+.+.  ..+.++|++|||+|+
T Consensus       143 lI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~--~~~~~~d~vl~~~g~  217 (323)
T cd05282         143 IQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSP--EDLAQRVKEA--TGGAGARLALDAVGG  217 (323)
T ss_pred             EEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccc--hhHHHHHHHH--hcCCCceEEEECCCC
Confidence            99998 9999999999999999 5778888888899999999988887543  3444555443  235689999999998


Q ss_pred             HHHHHHHHHHcccCCEEEEEcCCCC-CccccchhhhccceEEEEeehhHH
Q 020768          265 NKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARYLIYSFLFHFFL  313 (321)
Q Consensus       265 ~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~~~  313 (321)
                      . .....+++++++|+++.+|.... ...++...+..+++++.+...+.+
T Consensus       218 ~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (323)
T cd05282         218 E-SATRLARSLRPGGTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQW  266 (323)
T ss_pred             H-HHHHHHHhhCCCCEEEEEccCCCCCCCCCHHHHhhcCceEEEEEehHh
Confidence            4 56788999999999999996644 345666666669999999887654

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=99.98  E-value=5.7e-30  Score=234.74  Aligned_cols=256  Identities=23%  Similarity=0.288  Sum_probs=209.1

Q ss_pred             ceeEEEccCCC------eEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCC
Q 020768           18 NMAAWLLGVNT------LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE   91 (321)
Q Consensus        18 ~~a~~~~~~~~------l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~   91 (321)
                      ||++++.+++.      ++++++|.|.+.+++++||+.++++|+.|+..+.+..+   ...+|.++|||++|+|+++|++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~---~~~~~~~~g~e~~G~v~~~G~~   77 (336)
T cd08252           1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAP---VPGQPKILGWDASGVVEAVGSE   77 (336)
T ss_pred             CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCC---CCCCCcccccceEEEEEEcCCC
Confidence            67888876543      67778888899999999999999999999988766432   1345779999999999999999


Q ss_pred             CCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHH
Q 020768           92 VKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVG  170 (321)
Q Consensus        92 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a  170 (321)
                      ++.|++||+|+....                         ...+|+|++|+.++..+++++|+++++.+++.+. .+.++
T Consensus        78 v~~~~~Gd~V~~~~~-------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta  132 (336)
T cd08252          78 VTLFKVGDEVYYAGD-------------------------ITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTA  132 (336)
T ss_pred             CCCCCCCCEEEEcCC-------------------------CCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHH
Confidence            999999999986411                         0246999999999999999999999998887554 56678


Q ss_pred             HHHH-HHcCCCC-----CCEEEEEcC-ChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHH
Q 020768          171 LHAC-RRANIGP-----ETNVLIMGA-GPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAE  242 (321)
Q Consensus       171 ~~~l-~~~~~~~-----g~~vlI~Ga-g~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~  242 (321)
                      |+++ +.+.+.+     |++|+|+|+ |++|++++|+|+.+| . .++++++++++.++++++|++.+++...   ++.+
T Consensus       133 ~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~  208 (336)
T cd08252         133 WEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKELGADHVINHHQ---DLAE  208 (336)
T ss_pred             HHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHhcCCcEEEeCCc---cHHH
Confidence            8886 4577777     999999997 999999999999999 7 6888888899999999999988877542   4444


Q ss_pred             HHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeeh
Q 020768          243 EVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFH  310 (321)
Q Consensus       243 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~  310 (321)
                      .+..   ..+.++|++||++|+...+..++++++++|+++.+|...  ..++..+++.+++++.+...
T Consensus       209 ~i~~---~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~  271 (336)
T cd08252         209 QLEA---LGIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ--EPLDLGPLKSKSASFHWEFM  271 (336)
T ss_pred             HHHh---hCCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCCC--CcccchhhhcccceEEEEEe
Confidence            4442   234689999999997778999999999999999998653  45666666678999988654

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=99.98  E-value=9.5e-30  Score=232.67  Aligned_cols=255  Identities=24%  Similarity=0.277  Sum_probs=207.3

Q ss_pred             hceeEEEccC-----CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCC
Q 020768           17 VNMAAWLLGV-----NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE   91 (321)
Q Consensus        17 ~~~a~~~~~~-----~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~   91 (321)
                      .||++++..+     +.+++++.+.|.+.++|++|||.++++|+.|+....|.....  ..+|.++|||++|+|+.+|++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~--~~~p~~~g~e~~G~v~~vG~~   78 (329)
T cd08250           1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPG--VKPPFDCGFEGVGEVVAVGEG   78 (329)
T ss_pred             CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCC--CCCCcccCceeEEEEEEECCC
Confidence            4889988743     468899999999999999999999999999999887654222  356889999999999999999


Q ss_pred             CCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHH
Q 020768           92 VKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGL  171 (321)
Q Consensus        92 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~  171 (321)
                      ++.+++||+|...                             ..|+|++|+.++.+.++++|++. ...+++..++.++|
T Consensus        79 v~~~~~Gd~V~~~-----------------------------~~g~~~s~~~v~~~~~~~ip~~~-~~~a~l~~~~~ta~  128 (329)
T cd08250          79 VTDFKVGDAVATM-----------------------------SFGAFAEYQVVPARHAVPVPELK-PEVLPLLVSGLTAS  128 (329)
T ss_pred             CCCCCCCCEEEEe-----------------------------cCcceeEEEEechHHeEECCCCc-chhhhcccHHHHHH
Confidence            9999999999875                             24999999999999999999973 23344555888999


Q ss_pred             HHHH-HcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHH
Q 020768          172 HACR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       172 ~~l~-~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      +++. ...+++|++++|+|+ |.+|++++|+|++.|. .++++++++++.+.++++|++.+++.+.  .++.+.+...  
T Consensus       129 ~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~~~~--  203 (329)
T cd08250         129 IALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDRPINYKT--EDLGEVLKKE--  203 (329)
T ss_pred             HHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCceEEeCCC--ccHHHHHHHh--
Confidence            9985 478999999999997 9999999999999999 5788888888999999999988776433  3444444433  


Q ss_pred             HhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC-----------ccccchhhhccceEEEEeehh
Q 020768          250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE-----------MTVPLTPAAARYLIYSFLFHF  311 (321)
Q Consensus       250 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----------~~~~~~~~~~k~~~i~g~~~~  311 (321)
                       .+.++|++||++|+ ..+...+++++++|+++.+|.....           ..++. ..+.+++++.++...
T Consensus       204 -~~~~vd~v~~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  273 (329)
T cd08250         204 -YPKGVDVVYESVGG-EMFDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATLPP-KLLAKSASVRGFFLP  273 (329)
T ss_pred             -cCCCCeEEEECCcH-HHHHHHHHHhccCCeEEEEecccCCcccCcccccccccccH-HHhhcCceEEEEEhH
Confidence             24679999999996 7889999999999999999965432           12222 346789999998654

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=99.98  E-value=3.9e-30  Score=235.12  Aligned_cols=247  Identities=27%  Similarity=0.301  Sum_probs=203.1

Q ss_pred             hceeEEEccC---CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCC
Q 020768           17 VNMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (321)
Q Consensus        17 ~~~a~~~~~~---~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~   93 (321)
                      +||++.+.++   ..+++++++.|.|+++||+|||.++++|++|+....+.++.   ...|.++|||++|+|+.+|++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~---~~~~~~~g~e~~G~v~~vG~~v~   77 (327)
T PRK10754          1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPP---PSLPSGLGTEAAGVVSKVGSGVK   77 (327)
T ss_pred             CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCC---CCCCCccCcceEEEEEEeCCCCC
Confidence            4788888643   57999999999999999999999999999999887765432   23577899999999999999999


Q ss_pred             CCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHH
Q 020768           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLH  172 (321)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~  172 (321)
                      .+++||+|+...                           ...|+|++|+.++.+.++++|+++++.+++.+ ....++|.
T Consensus        78 ~~~~Gd~V~~~~---------------------------~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~  130 (327)
T PRK10754         78 HIKVGDRVVYAQ---------------------------SALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYY  130 (327)
T ss_pred             CCCCCCEEEECC---------------------------CCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHH
Confidence            999999997531                           13589999999999999999999999888754 36677888


Q ss_pred             HHH-HcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHH
Q 020768          173 ACR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA  250 (321)
Q Consensus       173 ~l~-~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~  250 (321)
                      ++. ...+++|++++|+|+ |.+|++++|+|+.+|+ .+++++.++++.++++++|++.+++.+  ..++.+.++++.  
T Consensus       131 ~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~--  205 (327)
T PRK10754        131 LLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVINYR--EENIVERVKEIT--  205 (327)
T ss_pred             HHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEcCC--CCcHHHHHHHHc--
Confidence            874 478899999999987 9999999999999999 588888899999999999998887643  345666666553  


Q ss_pred             hCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC-ccccchhhh
Q 020768          251 MGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE-MTVPLTPAA  299 (321)
Q Consensus       251 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~  299 (321)
                      .+.++|++|||+|+ ..+...+++++++|+++.+|..... ..++...+.
T Consensus       206 ~~~~~d~vl~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~  254 (327)
T PRK10754        206 GGKKVRVVYDSVGK-DTWEASLDCLQRRGLMVSFGNASGPVTGVNLGILN  254 (327)
T ss_pred             CCCCeEEEEECCcH-HHHHHHHHHhccCCEEEEEccCCCCCCCcCHHHHh
Confidence            35689999999997 6788999999999999999965432 234444433

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=99.98  E-value=2.8e-30  Score=237.50  Aligned_cols=241  Identities=27%  Similarity=0.358  Sum_probs=199.7

Q ss_pred             ceeEEEccC--CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCC
Q 020768           18 NMAAWLLGV--NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (321)
Q Consensus        18 ~~a~~~~~~--~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~   95 (321)
                      ||++++..+  ..+++++++.|.|+++||+|||.++++|++|+....+..    ....|.++|||++|+|+.+|++++.|
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~----~~~~~~~~g~e~~G~v~~vG~~v~~~   76 (339)
T cd08249           1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF----IPSYPAILGCDFAGTVVEVGSGVTRF   76 (339)
T ss_pred             CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc----ccCCCceeeeeeeEEEEEeCCCcCcC
Confidence            788999877  789999999999999999999999999999988765432    12347789999999999999999999


Q ss_pred             CCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHHH
Q 020768           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC  174 (321)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l  174 (321)
                      ++||+|+..+...|+                    +...+|+|++|+.++.+.++++|+++++.+++.++ ++.++|+++
T Consensus        77 ~~Gd~V~~~~~~~~~--------------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l  136 (339)
T cd08249          77 KVGDRVAGFVHGGNP--------------------NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALAL  136 (339)
T ss_pred             CCCCEEEEEeccccC--------------------CCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHH
Confidence            999999986432221                    11357999999999999999999999999888665 788899887


Q ss_pred             HH-cCC----------CCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHH
Q 020768          175 RR-ANI----------GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAE  242 (321)
Q Consensus       175 ~~-~~~----------~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~  242 (321)
                      .. .++          +++++++|+|+ |.+|++++++|+++|+ .++++. ++++.++++++|++.+++...  .++.+
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~~g~~~v~~~~~--~~~~~  212 (339)
T cd08249         137 FQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKSLGADAVFDYHD--PDVVE  212 (339)
T ss_pred             hccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHhcCCCEEEECCC--chHHH
Confidence            43 433          78999999998 9999999999999999 466665 568888999999988887543  45555


Q ss_pred             HHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHccc--CCEEEEEcCCCC
Q 020768          243 EVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRA--GGKVCLVGMGHL  289 (321)
Q Consensus       243 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~--~G~~v~~g~~~~  289 (321)
                      .++++   .++++|++||++|++..+..+++++++  +|+++.+|....
T Consensus       213 ~l~~~---~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~  258 (339)
T cd08249         213 DIRAA---TGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPE  258 (339)
T ss_pred             HHHHh---cCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCc
Confidence            55543   346799999999986788999999999  999999986644

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=99.97  E-value=2.9e-29  Score=227.90  Aligned_cols=257  Identities=27%  Similarity=0.349  Sum_probs=204.6

Q ss_pred             ceeEEEccC---CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768           18 NMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (321)
Q Consensus        18 ~~a~~~~~~---~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~   94 (321)
                      ||++++.++   ..+++.+.+.|.++++|++|||.++++|+.|+....+....   ...|.++|||++|+|+++|.  ..
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~---~~~~~~~g~e~~G~v~~vG~--~~   75 (320)
T cd08243           1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPS---VKFPRVLGIEAVGEVEEAPG--GT   75 (320)
T ss_pred             CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC---CCCCccccceeEEEEEEecC--CC
Confidence            677877644   35778888888899999999999999999999888764321   34578999999999999994  57


Q ss_pred             CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHHH
Q 020768           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHA  173 (321)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~~  173 (321)
                      +++||+|+......                      +...+|+|++|+.+++..++++|+++++.+++.+ .++.++|++
T Consensus        76 ~~~Gd~V~~~~~~~----------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~  133 (320)
T cd08243          76 FTPGQRVATAMGGM----------------------GRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGS  133 (320)
T ss_pred             CCCCCEEEEecCCC----------------------CCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHH
Confidence            99999998763210                      0124699999999999999999999999887754 488889998


Q ss_pred             HHH-cCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768          174 CRR-ANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       174 l~~-~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      +.. ..+++|++|||+|+ |++|++++|+|+++|+ .++++..++++.++++++|++.+++.   ..++.+.+.++    
T Consensus       134 l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~---~~~~~~~i~~~----  205 (320)
T cd08243         134 LFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID---DGAIAEQLRAA----  205 (320)
T ss_pred             HHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec---CccHHHHHHHh----
Confidence            855 67899999999998 9999999999999999 58888888999999999999887642   23555555543    


Q ss_pred             CCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCcc---ccchhh--hccceEEEEeeh
Q 020768          252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMT---VPLTPA--AARYLIYSFLFH  310 (321)
Q Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~---~~~~~~--~~k~~~i~g~~~  310 (321)
                      +.++|+++|++|+ ..+...+++++++|+++.+|......+   .....+  ..+++++.++..
T Consensus       206 ~~~~d~vl~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (320)
T cd08243         206 PGGFDKVLELVGT-ATLKDSLRHLRPGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSS  268 (320)
T ss_pred             CCCceEEEECCCh-HHHHHHHHHhccCCEEEEEccCCCCcccCCcchhhhhhhccceEEEecch
Confidence            5689999999997 688999999999999999996433211   112222  267888887754

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=99.97  E-value=3.2e-29  Score=227.11  Aligned_cols=259  Identities=27%  Similarity=0.356  Sum_probs=211.9

Q ss_pred             ceeEEEcc---CCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768           18 NMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (321)
Q Consensus        18 ~~a~~~~~---~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~   94 (321)
                      ||++++.+   +..+++++.+.|.+.++|++|||.++++|+.|+....+....  ...+|.++|||++|+|+++|++++.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~vg~~~~~   78 (323)
T cd05276           1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPP--PPGASDILGLEVAGVVVAVGPGVTG   78 (323)
T ss_pred             CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCC--CCCCCCcccceeEEEEEeeCCCCCC
Confidence            78888875   456888888888889999999999999999999887664321  1345789999999999999999999


Q ss_pred             CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHHH
Q 020768           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHA  173 (321)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~~  173 (321)
                      +++||+|+..                            ..+|+|++|+.+++++++++|+++++.+++.+ .++.+++++
T Consensus        79 ~~~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~  130 (323)
T cd05276          79 WKVGDRVCAL----------------------------LAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQN  130 (323)
T ss_pred             CCCCCEEEEe----------------------------cCCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHH
Confidence            9999999875                            13589999999999999999999998887754 578889988


Q ss_pred             HH-HcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768          174 CR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       174 l~-~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      +. ...+.++++++|+|+ |++|++++++++..|+ .++++++++++.+.++++|++.+++...  .++.+.+.+..  .
T Consensus       131 ~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~--~  205 (323)
T cd05276         131 LFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAINYRT--EDFAEEVKEAT--G  205 (323)
T ss_pred             HHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCc--hhHHHHHHHHh--C
Confidence            74 478899999999998 9999999999999999 5888888888999899999887766432  34444444432  2


Q ss_pred             CCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-CccccchhhhccceEEEEeehhH
Q 020768          252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARYLIYSFLFHFF  312 (321)
Q Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~~  312 (321)
                      +.++|++||+.|+ ..+...+++++++|+++.+|..+. ...+++..++.|++++.++....
T Consensus       206 ~~~~d~vi~~~g~-~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (323)
T cd05276         206 GRGVDVILDMVGG-DYLARNLRALAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRS  266 (323)
T ss_pred             CCCeEEEEECCch-HHHHHHHHhhccCCEEEEEecCCCCCCCCchHHHHHhCCeEEEeeccc
Confidence            4679999999997 457889999999999999986543 34556666777999999886543

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=99.97  E-value=5.4e-29  Score=226.00  Aligned_cols=262  Identities=29%  Similarity=0.399  Sum_probs=213.3

Q ss_pred             ceeEEEccC---CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768           18 NMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (321)
Q Consensus        18 ~~a~~~~~~---~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~   94 (321)
                      ||++++...   ..+++.++|.|.+.+++++||+.++++|++|+..+.+....  ....|.++|||++|+|+++|++++.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~~   78 (325)
T cd08253           1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPG--LPPLPYVPGSDGAGVVEAVGEGVDG   78 (325)
T ss_pred             CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCC--CCCCCeecccceEEEEEeeCCCCCC
Confidence            577777643   45889999999999999999999999999999887764322  1356889999999999999999999


Q ss_pred             CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHHH
Q 020768           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHA  173 (321)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~~  173 (321)
                      |++||+|+..+..                    +   ....|++++|+.++.+.++++|+++++.+++.+ .++.+++++
T Consensus        79 ~~~Gd~v~~~~~~--------------------~---~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~  135 (325)
T cd08253          79 LKVGDRVWLTNLG--------------------W---GRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRA  135 (325)
T ss_pred             CCCCCEEEEeccc--------------------c---CCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHH
Confidence            9999999886321                    0   013689999999999999999999999988755 477889988


Q ss_pred             HHH-cCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768          174 CRR-ANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       174 l~~-~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      +.. ..+.+|++++|+|+ +++|++++++++..|. .++++++++++.++++++|++.+++...  .++.+.+.++.  .
T Consensus       136 l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~--~  210 (325)
T cd08253         136 LFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFNYRA--EDLADRILAAT--A  210 (325)
T ss_pred             HHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC--cCHHHHHHHHc--C
Confidence            854 88999999999998 9999999999999998 6888888899999999999988776532  34555554432  2


Q ss_pred             CCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeeh
Q 020768          252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFH  310 (321)
Q Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~  310 (321)
                      +.++|+++|++++ ......+++++++|+++.+|......++++.+++.+++++.+...
T Consensus       211 ~~~~d~vi~~~~~-~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (325)
T cd08253         211 GQGVDVIIEVLAN-VNLAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLL  268 (325)
T ss_pred             CCceEEEEECCch-HHHHHHHHhhCCCCEEEEEeecCCcCCCChhHHHhcCceEEeeeh
Confidence            4679999999997 467888999999999999997554445666666678888877653

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=99.97  E-value=1.1e-28  Score=225.09  Aligned_cols=257  Identities=21%  Similarity=0.215  Sum_probs=202.2

Q ss_pred             ceeEEEccCC---CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768           18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (321)
Q Consensus        18 ~~a~~~~~~~---~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~   94 (321)
                      |||+++.+++   .+++++.|.|.|+++||+|||.++++|+.|.....+....  ...+|.++|||++|+|++  ++++.
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~V~~--~~~~~   76 (324)
T cd08288           1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGI--VRTFPLVPGIDLAGTVVE--SSSPR   76 (324)
T ss_pred             CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccc--cCCCCCccccceEEEEEe--CCCCC
Confidence            7888888654   6899999999999999999999999999999887764311  123578899999999999  77788


Q ss_pred             CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHH
Q 020768           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (321)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~  173 (321)
                      +++||+|+.....              .        +...+|+|++|+.++.+.++++|+++++.+++.+. .+.+++.+
T Consensus        77 ~~~Gd~V~~~~~~--------------~--------~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~  134 (324)
T cd08288          77 FKPGDRVVLTGWG--------------V--------GERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLC  134 (324)
T ss_pred             CCCCCEEEECCcc--------------C--------CCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHH
Confidence            9999999875210              0        00135899999999999999999999998888654 55566655


Q ss_pred             HH---HcCCC-CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHH
Q 020768          174 CR---RANIG-PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQ  248 (321)
Q Consensus       174 l~---~~~~~-~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~  248 (321)
                      ++   ..... ++++++|+|+ |++|++++|+|+++|+ .++++++++++.++++++|++.++++++    ....++.+ 
T Consensus       135 ~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~-  208 (324)
T cd08288         135 VMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASEIIDRAE----LSEPGRPL-  208 (324)
T ss_pred             HHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCEEEEcch----hhHhhhhh-
Confidence            43   45555 5789999998 9999999999999999 5888888999999999999998887543    22223332 


Q ss_pred             HHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-CccccchhhhccceEEEEee
Q 020768          249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARYLIYSFLF  309 (321)
Q Consensus       249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~  309 (321)
                        ...++|.++|++++ .....++..++.+|+++.+|.... +..+++..++.+++++.|..
T Consensus       209 --~~~~~~~~~d~~~~-~~~~~~~~~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~  267 (324)
T cd08288         209 --QKERWAGAVDTVGG-HTLANVLAQTRYGGAVAACGLAGGADLPTTVMPFILRGVTLLGID  267 (324)
T ss_pred             --ccCcccEEEECCcH-HHHHHHHHHhcCCCEEEEEEecCCCCCCcchhhhhccccEEEEEE
Confidence              23468999999996 467788899999999999996532 23455566668999999964

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=99.97  E-value=4.4e-29  Score=214.88  Aligned_cols=243  Identities=19%  Similarity=0.180  Sum_probs=196.1

Q ss_pred             CCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeC--CCCCCCCCCCEEEE
Q 020768           26 VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG--SEVKTLVPGDRVAL  103 (321)
Q Consensus        26 ~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG--~~v~~~~~Gd~V~~  103 (321)
                      +..|+++|+++|+|+++|||+|+.+.+++|.-    +|.+.+....-.|+-+|...+|.++...  ++...|++||.|..
T Consensus        24 ~d~F~lee~~vp~p~~GqvLl~~~ylS~DPym----Rgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~   99 (340)
T COG2130          24 PDDFRLEEVDVPEPGEGQVLLRTLYLSLDPYM----RGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVG   99 (340)
T ss_pred             CCCceeEeccCCCCCcCceEEEEEEeccCHHH----eecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEe
Confidence            36799999999999999999999999999832    2322222123457778877665554443  55777999999986


Q ss_pred             cCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCC---ChhhhccchhhHHHHHHH-HHcCC
Q 020768          104 EPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNV---SLEEGAMCEPLSVGLHAC-RRANI  179 (321)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~---~~~~aa~~~~~~~a~~~l-~~~~~  179 (321)
                      .                               .+|+||.+++.+.+.+++++.   ++....+-++..|||.+| +.+..
T Consensus       100 ~-------------------------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqp  148 (340)
T COG2130         100 V-------------------------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQP  148 (340)
T ss_pred             c-------------------------------ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCC
Confidence            4                               799999999999999998664   333333556889999998 56899


Q ss_pred             CCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH-cCCCeEEecCCCcccHHHHHHHHHHHhCCCccE
Q 020768          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       180 ~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      ++|++|+|-+| |++|..+.|+||..|+ +||++..++||.+++++ +|.|.+|||..  +++.+.+.+.   .+.|+|+
T Consensus       149 k~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~--~d~~~~L~~a---~P~GIDv  222 (340)
T COG2130         149 KAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA--EDFAQALKEA---CPKGIDV  222 (340)
T ss_pred             CCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCc--ccHHHHHHHH---CCCCeEE
Confidence            99999999988 9999999999999999 79999999999999987 99999999876  4777776664   5799999


Q ss_pred             EEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC--cccc-----chhhhccceEEEEeeh
Q 020768          258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE--MTVP-----LTPAAARYLIYSFLFH  310 (321)
Q Consensus       258 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~-----~~~~~~k~~~i~g~~~  310 (321)
                      .||++|+ +.+.+.+..|+..+|+..+|.-.+.  .+.+     +..++.|+++++|++.
T Consensus       223 yfeNVGg-~v~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv  281 (340)
T COG2130         223 YFENVGG-EVLDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIV  281 (340)
T ss_pred             EEEcCCc-hHHHHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEe
Confidence            9999998 6999999999999999999953221  1122     2337889999999987

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=99.97  E-value=9.6e-29  Score=227.92  Aligned_cols=235  Identities=26%  Similarity=0.342  Sum_probs=189.6

Q ss_pred             ceeEEEccCCC----eEEEEecCCCC-CCCcEEEEEeEeecccccHhhhhccccC-------C-----cCCCCCcccccc
Q 020768           18 NMAAWLLGVNT----LKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCA-------D-----FVVKEPMVIGHE   80 (321)
Q Consensus        18 ~~a~~~~~~~~----l~~~e~~~p~~-~~~evlVkv~a~~l~~~D~~~~~g~~~~-------~-----~~~~~p~~~G~e   80 (321)
                      ||++++.+++.    ++++|.+.|.| +++||+|||.++++|++|+..+.+...+       .     .....|.++|||
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e   80 (350)
T cd08248           1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD   80 (350)
T ss_pred             CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence            68888775433    88999999999 5999999999999999999988763210       0     013558899999


Q ss_pred             eeEEEEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhh
Q 020768           81 CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEE  160 (321)
Q Consensus        81 ~vG~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~  160 (321)
                      ++|+|+++|+++++|++||+|+..+..                         ...|+|++|+.++.++++++|+++++.+
T Consensus        81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~-------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~  135 (350)
T cd08248          81 CSGVVVDIGSGVKSFEIGDEVWGAVPP-------------------------WSQGTHAEYVVVPENEVSKKPKNLSHEE  135 (350)
T ss_pred             eEEEEEecCCCcccCCCCCEEEEecCC-------------------------CCCccceeEEEecHHHeecCCCCCCHHH
Confidence            999999999999999999999875321                         1359999999999999999999999988


Q ss_pred             hccch-hhHHHHHHHHH-cCCC----CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEec
Q 020768          161 GAMCE-PLSVGLHACRR-ANIG----PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV  233 (321)
Q Consensus       161 aa~~~-~~~~a~~~l~~-~~~~----~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~  233 (321)
                      ++.+. ...++|+++.. ..+.    +|++++|+|+ |++|++++++|+++|+ .++++.++ ++.++++++|++.+++.
T Consensus       136 aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~-~~~~~~~~~g~~~~~~~  213 (350)
T cd08248         136 AASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVTTTCST-DAIPLVKSLGADDVIDY  213 (350)
T ss_pred             HhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCc-chHHHHHHhCCceEEEC
Confidence            87554 77788888754 5554    4999999997 9999999999999999 46666554 67788899999887775


Q ss_pred             CCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCC
Q 020768          234 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      ..  .++.+.+..     ..++|++||++|+. ....++++++++|+++.+|..
T Consensus       214 ~~--~~~~~~l~~-----~~~vd~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~  259 (350)
T cd08248         214 NN--EDFEEELTE-----RGKFDVILDTVGGD-TEKWALKLLKKGGTYVTLVSP  259 (350)
T ss_pred             CC--hhHHHHHHh-----cCCCCEEEECCChH-HHHHHHHHhccCCEEEEecCC
Confidence            32  233333322     35799999999975 889999999999999999854

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=99.97  E-value=2.2e-28  Score=223.52  Aligned_cols=246  Identities=21%  Similarity=0.195  Sum_probs=195.0

Q ss_pred             CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCC
Q 020768           27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPG  106 (321)
Q Consensus        27 ~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~~  106 (321)
                      +.++++++|.|.+.++||+|||.++++|+.|.....+......+...+.++|+|++|+|+++|.+  .|++||+|+..  
T Consensus        18 ~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~--~~~~Gd~V~~~--   93 (329)
T cd05288          18 DDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP--DFKVGDLVSGF--   93 (329)
T ss_pred             cceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC--CCCCCCEEecc--
Confidence            56999999999999999999999999999876555442110001123568899999999999964  79999999753  


Q ss_pred             ccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecC-CcEEECCCCCC--hhh-hc-cchhhHHHHHHHHH-cCCC
Q 020768          107 ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA-DLCFKLPDNVS--LEE-GA-MCEPLSVGLHACRR-ANIG  180 (321)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~-~~~~~ip~~~~--~~~-aa-~~~~~~~a~~~l~~-~~~~  180 (321)
                                                   ++|++|+.++. +.++++|++++  +.+ ++ +..++.++|+++.. ..+.
T Consensus        94 -----------------------------~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~  144 (329)
T cd05288          94 -----------------------------LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPK  144 (329)
T ss_pred             -----------------------------cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCC
Confidence                                         58999999999 99999999985  433 33 44578889998854 7789


Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH-cCCCeEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      ++++|||+|+ |++|++++|+|+..|+ .++++++++++.+++++ +|++.++++.+  .++.+.+.++.   +.++|++
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~v~~~~---~~~~d~v  218 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLVEELGFDAAINYKT--PDLAEALKEAA---PDGIDVY  218 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhhcCCceEEecCC--hhHHHHHHHhc---cCCceEE
Confidence            9999999997 9999999999999999 68888888999999988 99988887543  34555555442   4679999


Q ss_pred             EEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC-c-----cccchhhhccceEEEEeehhH
Q 020768          259 FDCAGFNKTMSTALSATRAGGKVCLVGMGHLE-M-----TVPLTPAAARYLIYSFLFHFF  312 (321)
Q Consensus       259 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-----~~~~~~~~~k~~~i~g~~~~~  312 (321)
                      |||+|+ ..+..++++++++|+++.+|..... .     .++...++.+++++.++....
T Consensus       219 i~~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (329)
T cd05288         219 FDNVGG-EILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSD  277 (329)
T ss_pred             EEcchH-HHHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchh
Confidence            999997 6889999999999999999965432 1     133455678999999876543

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=99.97  E-value=3.7e-29  Score=227.96  Aligned_cols=226  Identities=30%  Similarity=0.435  Sum_probs=179.4

Q ss_pred             CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCc-CCCCCcccccceeEE---EEEeC-CCCCCCCCCCEEE
Q 020768           28 TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF-VVKEPMVIGHECAGV---IEKVG-SEVKTLVPGDRVA  102 (321)
Q Consensus        28 ~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~-~~~~p~~~G~e~vG~---V~~vG-~~v~~~~~Gd~V~  102 (321)
                      ....++.+.|.|.+++++|++.++++|+.|++++.|...... ...+|.+.+.++.|.   +...| ..+..+..||.+.
T Consensus        19 ~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~   98 (347)
T KOG1198|consen   19 VLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVV   98 (347)
T ss_pred             eEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEe
Confidence            455678999999999999999999999999999998764331 125665555555444   44444 2333455555554


Q ss_pred             EcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHHHHH-c---
Q 020768          103 LEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACRR-A---  177 (321)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l~~-~---  177 (321)
                      ..                            ...|+|+||+++|+..++++|+++++.+||.++ ++.+||.++.. .   
T Consensus        99 ~~----------------------------~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~  150 (347)
T KOG1198|consen   99 AF----------------------------LSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGK  150 (347)
T ss_pred             ec----------------------------cCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccc
Confidence            32                            357999999999999999999999999999776 78899999854 6   


Q ss_pred             ---CCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCC
Q 020768          178 ---NIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       178 ---~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~  253 (321)
                         +.++|++|||+|+ |++|++++|+|++.++ ..+++.++++++++++++|++++++|++  +++.+.+.+.   .+.
T Consensus       151 ~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy~~--~~~~e~~kk~---~~~  224 (347)
T KOG1198|consen  151 RSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDYKD--ENVVELIKKY---TGK  224 (347)
T ss_pred             cccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecCCC--HHHHHHHHhh---cCC
Confidence               7999999999987 9999999999999995 5677779999999999999999999876  5666655543   268


Q ss_pred             CccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCC
Q 020768          254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       254 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  288 (321)
                      +||+||||+|+. .+...+.++..+|+...++..+
T Consensus       225 ~~DvVlD~vg~~-~~~~~~~~l~~~g~~~~i~~~~  258 (347)
T KOG1198|consen  225 GVDVVLDCVGGS-TLTKSLSCLLKGGGGAYIGLVG  258 (347)
T ss_pred             CccEEEECCCCC-ccccchhhhccCCceEEEEecc
Confidence            999999999985 7778888888888766666443

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=6e-28  Score=219.56  Aligned_cols=257  Identities=31%  Similarity=0.369  Sum_probs=205.9

Q ss_pred             ceeEEEccCC---CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768           18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (321)
Q Consensus        18 ~~a~~~~~~~---~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~   94 (321)
                      ||++++.+++   .+++++.+.|.+.+++|+|||.++++|++|+....+....  ....|.++|||++|+|+++|++++.
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~~~~   78 (326)
T cd08272           1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAA--RPPLPAILGCDVAGVVEAVGEGVTR   78 (326)
T ss_pred             CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCC--CCCCCcccccceeEEEEEeCCCCCC
Confidence            7899997543   4888888888899999999999999999999887664321  1335789999999999999999999


Q ss_pred             CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHH
Q 020768           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (321)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~  173 (321)
                      |++||+|+.....                       .....|+|++|+.++..+++++|+++++.+++.++ ...++|++
T Consensus        79 ~~~Gd~V~~~~~~-----------------------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~  135 (326)
T cd08272          79 FRVGDEVYGCAGG-----------------------LGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEG  135 (326)
T ss_pred             CCCCCEEEEccCC-----------------------cCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHH
Confidence            9999999875210                       01246899999999999999999999998877554 67778888


Q ss_pred             H-HHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768          174 C-RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       174 l-~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      + +...+++|++++|+|+ |.+|++++++|+.+|. .++++.++ ++.++++++|++.+++...  . +.+.+.++  ..
T Consensus       136 l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~--~-~~~~~~~~--~~  208 (326)
T cd08272         136 LVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIYYRE--T-VVEYVAEH--TG  208 (326)
T ss_pred             HHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEecch--h-HHHHHHHh--cC
Confidence            6 5688999999999997 9999999999999999 57777777 8888889999987776432  2 44555443  23


Q ss_pred             CCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeeh
Q 020768          252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFH  310 (321)
Q Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~  310 (321)
                      +.++|.++|++++ ......+++++++|+++.+|...   ..++.....+++++.+...
T Consensus       209 ~~~~d~v~~~~~~-~~~~~~~~~l~~~g~~v~~~~~~---~~~~~~~~~~~~~~~~~~~  263 (326)
T cd08272         209 GRGFDVVFDTVGG-ETLDASFEAVALYGRVVSILGGA---THDLAPLSFRNATYSGVFT  263 (326)
T ss_pred             CCCCcEEEECCCh-HHHHHHHHHhccCCEEEEEecCC---ccchhhHhhhcceEEEEEc
Confidence            5679999999997 57788999999999999998664   2233334478888888764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=99.97  E-value=1.3e-27  Score=216.22  Aligned_cols=245  Identities=30%  Similarity=0.391  Sum_probs=201.1

Q ss_pred             CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCC
Q 020768           27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPG  106 (321)
Q Consensus        27 ~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~~  106 (321)
                      ..+.+.+.+.|.+.++|++|||.++++|+.|+....+...    ..+|.++|||++|+|+.+|+++++|++||+|+... 
T Consensus        12 ~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~----~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~-   86 (320)
T cd05286          12 EVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYP----LPLPFVLGVEGAGVVEAVGPGVTGFKVGDRVAYAG-   86 (320)
T ss_pred             cceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCC----CCCCccCCcceeEEEEEECCCCCCCCCCCEEEEec-
Confidence            4577778888888999999999999999999988776432    24577899999999999999999999999998751 


Q ss_pred             ccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHHHHH-HcCCCCCCE
Q 020768          107 ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHACR-RANIGPETN  184 (321)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~  184 (321)
                                                 ..|+|++|+.++.+.++++|+++++.+++.+ ....++++++. ...+.+|++
T Consensus        87 ---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~  139 (320)
T cd05286          87 ---------------------------PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDT  139 (320)
T ss_pred             ---------------------------CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCE
Confidence                                       1589999999999999999999999887754 46677888774 488999999


Q ss_pred             EEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCC
Q 020768          185 VLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  263 (321)
Q Consensus       185 vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  263 (321)
                      |+|+|+ |++|++++++++.+|+ .+++++.++++.++++++|++.+++...  .++.+.+..+  ..+.++|++|||++
T Consensus       140 vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~--~~~~~~d~vl~~~~  214 (320)
T cd05286         140 VLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYRD--EDFVERVREI--TGGRGVDVVYDGVG  214 (320)
T ss_pred             EEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCCc--hhHHHHHHHH--cCCCCeeEEEECCC
Confidence            999997 9999999999999999 5888888899999999999988776432  3455555443  23567999999999


Q ss_pred             CHHHHHHHHHHcccCCEEEEEcCCCCC-ccccchhhhccceEEEEee
Q 020768          264 FNKTMSTALSATRAGGKVCLVGMGHLE-MTVPLTPAAARYLIYSFLF  309 (321)
Q Consensus       264 ~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~k~~~i~g~~  309 (321)
                      + .....++++++++|+++.+|..... ..++...+..|++++.+..
T Consensus       215 ~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  260 (320)
T cd05286         215 K-DTFEGSLDSLRPRGTLVSFGNASGPVPPFDLLRLSKGSLFLTRPS  260 (320)
T ss_pred             c-HhHHHHHHhhccCcEEEEEecCCCCCCccCHHHHHhcCcEEEEEe
Confidence            7 5888999999999999999965432 3455555557889887654

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=99.97  E-value=1.4e-27  Score=216.91  Aligned_cols=258  Identities=26%  Similarity=0.306  Sum_probs=208.5

Q ss_pred             ceeEEEcc---CCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768           18 NMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (321)
Q Consensus        18 ~~a~~~~~---~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~   94 (321)
                      ||++.+..   +..+++.+.+.|.+++++++|||.++++|+.|+....+....+  ..+|.++|||++|+|+.+|+++..
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~--~~~~~~~g~e~~G~v~~vg~~~~~   78 (325)
T TIGR02824         1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPP--PGASDILGLEVAGEVVAVGEGVSR   78 (325)
T ss_pred             CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC--CCCCCCccceeEEEEEEeCCCCCC
Confidence            57777654   3457778888777899999999999999999988876643222  335789999999999999999999


Q ss_pred             CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHHH
Q 020768           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHA  173 (321)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~~  173 (321)
                      +++||+|+...                            .+|+|++|+.++..+++++|+++++.+++.+ .++.+++++
T Consensus        79 ~~~Gd~V~~~~----------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~  130 (325)
T TIGR02824        79 WKVGDRVCALV----------------------------AGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSN  130 (325)
T ss_pred             CCCCCEEEEcc----------------------------CCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHH
Confidence            99999998741                            2489999999999999999999998887644 477888888


Q ss_pred             H-HHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768          174 C-RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       174 l-~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      + +...++++++++|+|+ |++|++++++++.+|+ .++++.+++++.+.++++|++.+++..  ..++.+.+....  .
T Consensus       131 ~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~--~  205 (325)
T TIGR02824       131 LFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAINYR--EEDFVEVVKAET--G  205 (325)
T ss_pred             HHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecC--chhHHHHHHHHc--C
Confidence            6 5688999999999998 9999999999999999 578888888888888899987776543  234444444432  2


Q ss_pred             CCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-CccccchhhhccceEEEEeehh
Q 020768          252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARYLIYSFLFHF  311 (321)
Q Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~  311 (321)
                      +.++|++++++|+ ..+..++++++++|+++.+|.... ...+++..++.|++++.++...
T Consensus       206 ~~~~d~~i~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (325)
T TIGR02824       206 GKGVDVILDIVGG-SYLNRNIKALALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLR  265 (325)
T ss_pred             CCCeEEEEECCch-HHHHHHHHhhccCcEEEEEecCCCCcCCCChHHHHhcCCEEEEEehh
Confidence            4579999999996 578899999999999999996542 2356667677899999998753

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=2.4e-27  Score=215.82  Aligned_cols=235  Identities=27%  Similarity=0.349  Sum_probs=194.1

Q ss_pred             ceeEEEccCC---CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768           18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (321)
Q Consensus        18 ~~a~~~~~~~---~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~   94 (321)
                      ||++++.+++   .++++++|.|.+.+++++|||.++++|+.|+....+....   ...|.++|||++|+|+.+|++++.
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~---~~~~~~~g~e~~G~v~~~G~~~~~   77 (325)
T cd08271           1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPA---WSYPHVPGVDGAGVVVAVGAKVTG   77 (325)
T ss_pred             CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC---CCCCcccccceEEEEEEeCCCCCc
Confidence            7899998877   8999999999999999999999999999999887654321   223678999999999999999999


Q ss_pred             CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHHH
Q 020768           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHA  173 (321)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~~  173 (321)
                      +++||+|...+.                         ....|+|++|+.++.+.++++|++++..+++.+ ..+.+++++
T Consensus        78 ~~~Gd~V~~~~~-------------------------~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~  132 (325)
T cd08271          78 WKVGDRVAYHAS-------------------------LARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQA  132 (325)
T ss_pred             CCCCCEEEeccC-------------------------CCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHH
Confidence            999999987531                         013589999999999999999999999888755 478888988


Q ss_pred             HH-HcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768          174 CR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       174 l~-~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      ++ .+.+++|++++|+|+ |++|+++++++++.|. .++++. ++++.++++++|++.+++..  ..++.+.+.++.  .
T Consensus       133 ~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~--~  206 (325)
T cd08271         133 LFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDYN--DEDVCERIKEIT--G  206 (325)
T ss_pred             HHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecCC--CccHHHHHHHHc--C
Confidence            85 478899999999999 8999999999999999 466665 66788888889998777643  234444454432  2


Q ss_pred             CCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCC
Q 020768          252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      +.++|++++++++. .....+++++++|+++.++..
T Consensus       207 ~~~~d~vi~~~~~~-~~~~~~~~l~~~G~~v~~~~~  241 (325)
T cd08271         207 GRGVDAVLDTVGGE-TAAALAPTLAFNGHLVCIQGR  241 (325)
T ss_pred             CCCCcEEEECCCcH-hHHHHHHhhccCCEEEEEcCC
Confidence            56799999999975 556789999999999999744

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=3.9e-27  Score=214.22  Aligned_cols=262  Identities=27%  Similarity=0.385  Sum_probs=210.0

Q ss_pred             ceeEEEccC---CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768           18 NMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (321)
Q Consensus        18 ~~a~~~~~~---~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~   94 (321)
                      ||++++.+.   ..+++.+.+.|.+++++++|+|.++++|+.|+....+.....  ..+|.++|||++|+|+.+|++++.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~--~~~~~~~g~e~~G~v~~~G~~~~~   78 (328)
T cd08268           1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEP--PPLPARLGYEAAGVVEAVGAGVTG   78 (328)
T ss_pred             CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCC--CCCCCCCCcceEEEEEeeCCCCCc
Confidence            678888643   467888888888999999999999999999998876654322  344788999999999999999999


Q ss_pred             CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHHH
Q 020768           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHA  173 (321)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~~  173 (321)
                      |++||+|+..+...                       ....|++++|+.++.+.++++|+++++.+++.+ .++.++|++
T Consensus        79 ~~~Gd~V~~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~  135 (328)
T cd08268          79 FAVGDRVSVIPAAD-----------------------LGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGA  135 (328)
T ss_pred             CCCCCEEEeccccc-----------------------cCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHH
Confidence            99999998763210                       124589999999999999999999998887754 478889988


Q ss_pred             HH-HcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768          174 CR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       174 l~-~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      +. ...+.++++++|+|+ |++|++++++++..|. .+++++.++++.+.++++|++.+++.+.  .++.+.+.+..  .
T Consensus       136 ~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~--~  210 (328)
T cd08268         136 LVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIVTDE--EDLVAEVLRIT--G  210 (328)
T ss_pred             HHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEecCC--ccHHHHHHHHh--C
Confidence            75 578889999999998 9999999999999999 5888888888888888899887776432  34444444432  2


Q ss_pred             CCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-CccccchhhhccceEEEEeeh
Q 020768          252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARYLIYSFLFH  310 (321)
Q Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~  310 (321)
                      +.++|++++++++ .....++++++++|+++.+|.... ...++....+.|++++.+...
T Consensus       211 ~~~~d~vi~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (328)
T cd08268         211 GKGVDVVFDPVGG-PQFAKLADALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSL  269 (328)
T ss_pred             CCCceEEEECCch-HhHHHHHHhhccCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEec
Confidence            4579999999997 678899999999999999986543 234555445778999888754

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08251 polyketide_synthase polyketide synthase

Probab=99.96  E-value=3.7e-27  Score=212.20  Aligned_cols=219  Identities=26%  Similarity=0.409  Sum_probs=186.3

Q ss_pred             CCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCccCCCCccc
Q 020768           36 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHC  115 (321)
Q Consensus        36 ~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~  115 (321)
                      .|.+.+++++||+.++++|+.|+..+.+.+..  ...+|.++|+|++|+|+++|+++++|++||+|+.+..         
T Consensus         2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~---------   70 (303)
T cd08251           2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPT--MPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTG---------   70 (303)
T ss_pred             CCCCCCCEEEEEEEEeecChHHHHHHCCCCCC--CCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecC---------
Confidence            57789999999999999999999988775432  1356889999999999999999999999999987521         


Q ss_pred             cCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHHHHHcCCCCCCEEEEEcC-Chh
Q 020768          116 KGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGA-GPI  193 (321)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~vlI~Ga-g~v  193 (321)
                                       ..+|+|++|+.++++.++++|++++..+++.+. .+.++|++++...+++|++++|+|+ |++
T Consensus        71 -----------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~g~~vli~~~~~~~  133 (303)
T cd08251          71 -----------------ESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFARAGLAKGEHILIQTATGGT  133 (303)
T ss_pred             -----------------CCCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHHhcCCCCCCEEEEecCCcHH
Confidence                             246999999999999999999999999888654 7788999988889999999999977 999


Q ss_pred             HHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHH
Q 020768          194 GLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALS  273 (321)
Q Consensus       194 G~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~  273 (321)
                      |++++|+++++|+ .++++++++++.+.++++|++.+++...  .++.+.+..+.  .+.++|+++|++++ ..+...++
T Consensus       134 g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~i~~~~--~~~~~d~v~~~~~~-~~~~~~~~  207 (303)
T cd08251         134 GLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVE--EDFEEEIMRLT--GGRGVDVVINTLSG-EAIQKGLN  207 (303)
T ss_pred             HHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCC--ccHHHHHHHHc--CCCCceEEEECCcH-HHHHHHHH
Confidence            9999999999999 6888888888999999999988887543  35555555442  35679999999985 68889999


Q ss_pred             HcccCCEEEEEcCCC
Q 020768          274 ATRAGGKVCLVGMGH  288 (321)
Q Consensus       274 ~l~~~G~~v~~g~~~  288 (321)
                      +++++|+++.+|..+
T Consensus       208 ~l~~~g~~v~~~~~~  222 (303)
T cd08251         208 CLAPGGRYVEIAMTA  222 (303)
T ss_pred             HhccCcEEEEEeccC
Confidence            999999999998654

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=3.2e-27  Score=215.95  Aligned_cols=231  Identities=24%  Similarity=0.292  Sum_probs=189.6

Q ss_pred             ceeEEEcc---CCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768           18 NMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (321)
Q Consensus        18 ~~a~~~~~---~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~   94 (321)
                      .|++++..   +..+++++.+.|.|.++|++||+.++++|+.|+.++.+.....  ..+|.++|||++|+|+.+|++++.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~v~~vG~~v~~   78 (331)
T cd08273           1 NREVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQ--PPLPFTPGYDLVGRVDALGSGVTG   78 (331)
T ss_pred             CeeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCC--CCCCcccccceEEEEEEeCCCCcc
Confidence            36677764   3568999999999999999999999999999998887654221  246889999999999999999999


Q ss_pred             CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHHH
Q 020768           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHA  173 (321)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~~  173 (321)
                      |++||+|...+                            ..|+|++|+.++.+.++++|+++++.+++.+ .++.++|++
T Consensus        79 ~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~  130 (331)
T cd08273          79 FEVGDRVAALT----------------------------RVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQM  130 (331)
T ss_pred             CCCCCEEEEeC----------------------------CCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHH
Confidence            99999998752                            2489999999999999999999999888754 477889988


Q ss_pred             HHH-cCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768          174 CRR-ANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       174 l~~-~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      +.. ..+++|++++|+|+ |++|++++++|+.+|+ .++++.. +++.++++++|+.. ++..  ..++.+.  .   ..
T Consensus       131 l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~~--~~~~~~~--~---~~  200 (331)
T cd08273         131 LHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-IDYR--TKDWLPA--M---LT  200 (331)
T ss_pred             HHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcCC--Ccchhhh--h---cc
Confidence            854 78999999999998 9999999999999999 5777776 88888999999754 3322  2233222  1   12


Q ss_pred             CCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC
Q 020768          252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL  289 (321)
Q Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  289 (321)
                      ++++|+++|++|+. .+...+++++++|+++.+|....
T Consensus       201 ~~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~  237 (331)
T cd08273         201 PGGVDVVFDGVGGE-SYEESYAALAPGGTLVCYGGNSS  237 (331)
T ss_pred             CCCceEEEECCchH-HHHHHHHHhcCCCEEEEEccCCC
Confidence            45799999999975 58899999999999999996543

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=99.96  E-value=8.5e-27  Score=211.40  Aligned_cols=256  Identities=30%  Similarity=0.476  Sum_probs=206.9

Q ss_pred             ceeEEEcc---CCCeEEEEecCCCCC-CCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCC
Q 020768           18 NMAAWLLG---VNTLKIQPFELPSLG-PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (321)
Q Consensus        18 ~~a~~~~~---~~~l~~~e~~~p~~~-~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~   93 (321)
                      |+++++..   +..+++.+.+ |.+. +++++||+.++++|+.|+..+.+.....  ...|.++|||++|+|+.+|++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~v~~~g~~~~   77 (323)
T cd08241           1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVK--PPLPFVPGSEVAGVVEAVGEGVT   77 (323)
T ss_pred             CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCC--CCCCCcccceeEEEEEEeCCCCC
Confidence            68888863   3567888887 7766 4999999999999999998877643211  23467899999999999999999


Q ss_pred             CCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhcc-chhhHHHHH
Q 020768           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAM-CEPLSVGLH  172 (321)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~-~~~~~~a~~  172 (321)
                      .+++||+|+..+                            ..|++++|+.++.+.++++|++++..+++. ..+..++++
T Consensus        78 ~~~~G~~V~~~~----------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~  129 (323)
T cd08241          78 GFKVGDRVVALT----------------------------GQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYH  129 (323)
T ss_pred             CCCCCCEEEEec----------------------------CCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHH
Confidence            999999998752                            248999999999999999999999888764 457788888


Q ss_pred             HHH-HcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHH
Q 020768          173 ACR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA  250 (321)
Q Consensus       173 ~l~-~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~  250 (321)
                      ++. ...++++++++|+|+ |++|++++++|+..|+ .+++++.++++.++++++|++.+++...  .++.+.+..+.  
T Consensus       130 ~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~i~~~~--  204 (323)
T cd08241         130 ALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVIDYRD--PDLRERVKALT--  204 (323)
T ss_pred             HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceeeecCC--ccHHHHHHHHc--
Confidence            875 578899999999998 9999999999999999 5888888889999999999877766433  45555555542  


Q ss_pred             hCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCcc-ccchhhhccceEEEEeeh
Q 020768          251 MGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMT-VPLTPAAARYLIYSFLFH  310 (321)
Q Consensus       251 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~k~~~i~g~~~  310 (321)
                      .+.++|.++|++|+ ..+..++++++++|+++.+|....... ++....+.+++++.+...
T Consensus       205 ~~~~~d~v~~~~g~-~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (323)
T cd08241         205 GGRGVDVVYDPVGG-DVFEASLRSLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYW  264 (323)
T ss_pred             CCCCcEEEEECccH-HHHHHHHHhhccCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEec
Confidence            25679999999997 688899999999999999996543322 444456778999998764

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=99.96  E-value=5.9e-27  Score=216.40  Aligned_cols=240  Identities=21%  Similarity=0.277  Sum_probs=183.1

Q ss_pred             eeEEEccC-CCeEEEEecCCCC---CCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCC-
Q 020768           19 MAAWLLGV-NTLKIQPFELPSL---GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK-   93 (321)
Q Consensus        19 ~a~~~~~~-~~l~~~e~~~p~~---~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~-   93 (321)
                      |++++.++ +.+++++++.|.|   +++||+||+.++++|++|+..+.+.. .. ....|.++|+|++|+|+++|++++ 
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~-~~-~~~~~~~~g~e~~G~V~~vG~~v~~   79 (352)
T cd08247           2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYT-FH-FKVKEKGLGRDYSGVIVKVGSNVAS   79 (352)
T ss_pred             ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccc-cc-cccCCCccCceeEEEEEEeCccccc
Confidence            56677654 3566666665555   99999999999999999988765321 11 012377899999999999999998 


Q ss_pred             CCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCC----cEEECCCCCChhhhccch-hhH
Q 020768           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD----LCFKLPDNVSLEEGAMCE-PLS  168 (321)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~----~~~~ip~~~~~~~aa~~~-~~~  168 (321)
                      .|++||+|+.....+|                       ...|+|++|+.++..    .++++|+++++.+++.+. .+.
T Consensus        80 ~~~~Gd~V~~~~~~~~-----------------------~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~  136 (352)
T cd08247          80 EWKVGDEVCGIYPHPY-----------------------GGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLG  136 (352)
T ss_pred             CCCCCCEEEEeecCCC-----------------------CCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHH
Confidence            8999999987632111                       135999999999987    799999999999988654 677


Q ss_pred             HHHHHHHH-c-CCCCCCEEEEEcC-ChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHHHcCCCeEEecCCCcc-cHHHH
Q 020768          169 VGLHACRR-A-NIGPETNVLIMGA-GPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKELGADNIVKVSTNLQ-DIAEE  243 (321)
Q Consensus       169 ~a~~~l~~-~-~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~-~~~~~  243 (321)
                      ++|++++. . .+++|++++|+|+ +++|++++|+|+++|. +.++++.+ +++.++++++|++.+++.++... .+...
T Consensus       137 ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~~-~~~~~~~~~~g~~~~i~~~~~~~~~~~~~  215 (352)
T cd08247         137 TAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTCS-SRSAELNKKLGADHFIDYDAHSGVKLLKP  215 (352)
T ss_pred             HHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEeC-hhHHHHHHHhCCCEEEecCCCcccchHHH
Confidence            88988866 4 6999999999998 8999999999998754 35666654 45556778999988887544221 03333


Q ss_pred             HHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcc---cCCEEEEEc
Q 020768          244 VEKIQKAMGTGIDVSFDCAGFNKTMSTALSATR---AGGKVCLVG  285 (321)
Q Consensus       244 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~---~~G~~v~~g  285 (321)
                      +.+.. ..++++|++|||+|+.......+++++   ++|+++.++
T Consensus       216 ~~~~~-~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~  259 (352)
T cd08247         216 VLENV-KGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIV  259 (352)
T ss_pred             HHHhh-cCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEe
Confidence            32221 125689999999998678889999999   999999875

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=99.96  E-value=1.8e-26  Score=208.06  Aligned_cols=251  Identities=27%  Similarity=0.371  Sum_probs=195.4

Q ss_pred             ceeEEEccCC---CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768           18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (321)
Q Consensus        18 ~~a~~~~~~~---~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~   94 (321)
                      ||++++..++   .+.+++.+.|.++++||+|||.++++|+.|+..+.+..........|..+|||++|+|+.+|++++.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~   80 (309)
T cd05289           1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG   80 (309)
T ss_pred             CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence            6788887544   3667888888899999999999999999999887764321111345889999999999999999999


Q ss_pred             CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHH
Q 020768           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (321)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~  173 (321)
                      +++||+|+..+..                         ...|+|++|+.++...++++|+++++.+++.+. ...+++++
T Consensus        81 ~~~G~~V~~~~~~-------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~  135 (309)
T cd05289          81 FKVGDEVFGMTPF-------------------------TRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQA  135 (309)
T ss_pred             CCCCCEEEEccCC-------------------------CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHH
Confidence            9999999876310                         135899999999999999999999988877554 66778888


Q ss_pred             HHH-cCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768          174 CRR-ANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       174 l~~-~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      +.. ..+.+|++++|+|+ |.+|++++++++..|. .++++..++ +.++++++|++.+++...  .++.+      ...
T Consensus       136 ~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~~~~~~--~~~~~------~~~  205 (309)
T cd05289         136 LFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEVIDYTK--GDFER------AAA  205 (309)
T ss_pred             HHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEEEeCCC--Cchhh------ccC
Confidence            765 55899999999998 9999999999999999 466666666 788888999877776443  22222      123


Q ss_pred             CCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEe
Q 020768          252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFL  308 (321)
Q Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~  308 (321)
                      +.++|+++|++|+. ....++++++++|+++.+|.......    ....+++++...
T Consensus       206 ~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~----~~~~~~~~~~~~  257 (309)
T cd05289         206 PGGVDAVLDTVGGE-TLARSLALVKPGGRLVSIAGPPPAEQ----AAKRRGVRAGFV  257 (309)
T ss_pred             CCCceEEEECCchH-HHHHHHHHHhcCcEEEEEcCCCcchh----hhhhccceEEEE
Confidence            56799999999974 78899999999999999986543211    233455555544

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.95  E-value=1.4e-25  Score=205.19  Aligned_cols=254  Identities=29%  Similarity=0.378  Sum_probs=198.8

Q ss_pred             eeEEEccC---CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCC
Q 020768           19 MAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (321)
Q Consensus        19 ~a~~~~~~---~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~   95 (321)
                      |++++...   ..+++.+.+.|.+.++|++||+.++++|+.|+..+.+....  ....|.++|||++|+|+.+|+++.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~~~   78 (337)
T cd08275           1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDS--APKPPFVPGFECAGTVEAVGEGVKDF   78 (337)
T ss_pred             CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC--CCCCCCCCcceeEEEEEEECCCCcCC
Confidence            34555432   36888888888899999999999999999999888765322  13457789999999999999999999


Q ss_pred             CCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHHH
Q 020768           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC  174 (321)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l  174 (321)
                      ++||+|+...                            ..|+|++|+.++.+.++++|+++++.+++.+. ++.++|+++
T Consensus        79 ~~G~~V~~~~----------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~  130 (337)
T cd08275          79 KVGDRVMGLT----------------------------RFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYAL  130 (337)
T ss_pred             CCCCEEEEec----------------------------CCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHH
Confidence            9999998751                            24899999999999999999999988877554 788889887


Q ss_pred             -HHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEe-CChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768          175 -RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVD-VDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       175 -~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~-~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                       +...+++|++|+|+|+ |++|++++++|+.+ . .+.+++ ..+++.++++++|++.+++...  .++.+.++.+.   
T Consensus       131 ~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~-~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~---  203 (337)
T cd08275         131 FELGNLRPGQSVLVHSAAGGVGLAAGQLCKTV-P-NVTVVGTASASKHEALKENGVTHVIDYRT--QDYVEEVKKIS---  203 (337)
T ss_pred             HHhhCCCCCCEEEEEcCcchHHHHHHHHHHHc-c-CcEEEEeCCHHHHHHHHHcCCcEEeeCCC--CcHHHHHHHHh---
Confidence             4578899999999998 99999999999998 2 223332 3456788888899987776432  45555555542   


Q ss_pred             CCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC--cc---------------ccchhhhccceEEEEeeh
Q 020768          252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE--MT---------------VPLTPAAARYLIYSFLFH  310 (321)
Q Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~---------------~~~~~~~~k~~~i~g~~~  310 (321)
                      +.++|+++|++|+ .....++++++++|+++.+|.....  ..               ++...++.+++++.++..
T Consensus       204 ~~~~d~v~~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (337)
T cd08275         204 PEGVDIVLDALGG-EDTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNL  278 (337)
T ss_pred             CCCceEEEECCcH-HHHHHHHHhhccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeec
Confidence            4679999999997 5778999999999999999865321  11               112345778888888754

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.95  E-value=1.1e-25  Score=200.85  Aligned_cols=228  Identities=26%  Similarity=0.332  Sum_probs=185.6

Q ss_pred             CcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCC
Q 020768           42 YDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYN  121 (321)
Q Consensus        42 ~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~  121 (321)
                      +|++||+.++++|+.|+....+..     ..+|.++|||++|+|+++|+++..|++||+|+..                 
T Consensus         1 ~~v~i~v~~~~~~~~d~~~~~g~~-----~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~-----------------   58 (293)
T cd05195           1 DEVEVEVKAAGLNFRDVLVALGLL-----PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGL-----------------   58 (293)
T ss_pred             CceEEEEEEEecCHHHHHHHhCCC-----CCCCCccceeeeEEEEeecCCccCCCCCCEEEEE-----------------
Confidence            589999999999999999887643     2357899999999999999999999999999875                 


Q ss_pred             CCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHHHH-HHcCCCCCCEEEEEcC-ChhHHHHH
Q 020768          122 LCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHAC-RRANIGPETNVLIMGA-GPIGLVTM  198 (321)
Q Consensus       122 ~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~Ga-g~vG~~a~  198 (321)
                                  ..|+|++|+.++.+.++++|+++++.+++.+ .+..+++.++ +...+++|++++|+|+ |++|++++
T Consensus        59 ------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~  126 (293)
T cd05195          59 ------------APGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAI  126 (293)
T ss_pred             ------------ecCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHH
Confidence                        2489999999999999999999999888765 4777888887 4478999999999986 99999999


Q ss_pred             HHHHHcCCCeEEEEeCChhHHHHHHHcC--CCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcc
Q 020768          199 LGARAFGAPRIVIVDVDDYRLSVAKELG--ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATR  276 (321)
Q Consensus       199 qla~~~g~~~vv~v~~~~~~~~~~~~~g--~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~  276 (321)
                      |+|+.+|. .++++..++++.+.+++++  ++.+++..  ..++.+.+.++.  .+.++|+++|++|+. .++..+++++
T Consensus       127 ~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~d~vi~~~~~~-~~~~~~~~l~  200 (293)
T cd05195         127 QLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSR--DLSFADGILRAT--GGRGVDVVLNSLSGE-LLRASWRCLA  200 (293)
T ss_pred             HHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecC--chhHHHHHHHHh--CCCCceEEEeCCCch-HHHHHHHhcc
Confidence            99999999 6888888888999998888  66666532  234555555442  256799999999985 8899999999


Q ss_pred             cCCEEEEEcCCCCC--ccccchhhhccceEEEEeeh
Q 020768          277 AGGKVCLVGMGHLE--MTVPLTPAAARYLIYSFLFH  310 (321)
Q Consensus       277 ~~G~~v~~g~~~~~--~~~~~~~~~~k~~~i~g~~~  310 (321)
                      ++|+++.+|.....  ..++... +.+++++.+...
T Consensus       201 ~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~  235 (293)
T cd05195         201 PFGRFVEIGKRDILSNSKLGMRP-FLRNVSFSSVDL  235 (293)
T ss_pred             cCceEEEeeccccccCCccchhh-hccCCeEEEEeH
Confidence            99999999965432  2344433 346677766543

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.95  E-value=1.6e-25  Score=203.27  Aligned_cols=226  Identities=30%  Similarity=0.337  Sum_probs=179.6

Q ss_pred             EEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCccC
Q 020768           30 KIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISC  109 (321)
Q Consensus        30 ~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~~~~~  109 (321)
                      ++++.|.|.++++||+||+.++++|+.|+..+.+..........|..+|||++|+|+++|++++.+.+||+|+.....  
T Consensus        15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~--   92 (319)
T cd08267          15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP--   92 (319)
T ss_pred             ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccC--
Confidence            788999999999999999999999999998877643211112346789999999999999999999999999875310  


Q ss_pred             CCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHHHHHH-cCCCCCCEEEE
Q 020768          110 WRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHACRR-ANIGPETNVLI  187 (321)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~~l~~-~~~~~g~~vlI  187 (321)
                                             ...|+|++|+.++.+.++++|+++++.+++.+ .++.++|++++. ..+++|++++|
T Consensus        93 -----------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli  149 (319)
T cd08267          93 -----------------------KGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLI  149 (319)
T ss_pred             -----------------------CCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEE
Confidence                                   13589999999999999999999999887755 477889998865 55899999999


Q ss_pred             EcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCC-H
Q 020768          188 MGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGF-N  265 (321)
Q Consensus       188 ~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~  265 (321)
                      +|+ |++|++++++|+.+|+ .+++++++ ++.++++++|++.+++....  ++.   ..  ...+.++|+++||+|+ .
T Consensus       150 ~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~~--~~~---~~--~~~~~~~d~vi~~~~~~~  220 (319)
T cd08267         150 NGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTTE--DFV---AL--TAGGEKYDVIFDAVGNSP  220 (319)
T ss_pred             EcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCCC--Ccc---hh--ccCCCCCcEEEECCCchH
Confidence            998 9999999999999999 57777655 78888899999877764432  222   11  1235679999999995 2


Q ss_pred             HHHHHHHHHcccCCEEEEEcCCCC
Q 020768          266 KTMSTALSATRAGGKVCLVGMGHL  289 (321)
Q Consensus       266 ~~~~~~~~~l~~~G~~v~~g~~~~  289 (321)
                      ......+..++++|+++.+|....
T Consensus       221 ~~~~~~~~~l~~~g~~i~~g~~~~  244 (319)
T cd08267         221 FSLYRASLALKPGGRYVSVGGGPS  244 (319)
T ss_pred             HHHHHhhhccCCCCEEEEeccccc
Confidence            233344445999999999996543

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>smart00829 PKS_ER Enoylreductase

Probab=99.94  E-value=4.9e-25  Score=196.44  Aligned_cols=223  Identities=28%  Similarity=0.401  Sum_probs=183.1

Q ss_pred             EEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCC
Q 020768           46 VRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE  125 (321)
Q Consensus        46 Vkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~  125 (321)
                      ||+.++++|+.|+..+.+.+      ..|.++|||++|+|+++|++++.|++||+|+..                     
T Consensus         2 i~v~~~~i~~~d~~~~~g~~------~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~---------------------   54 (288)
T smart00829        2 VEVRAAGLNFRDVLIALGLL------PGEAVLGGECAGVVTRVGPGVTGLAVGDRVMGL---------------------   54 (288)
T ss_pred             eeEEEEecCHHHHHHhcCCC------CCCCCCCceeEEEEEeeCCCCcCCCCCCEEEEE---------------------
Confidence            89999999999999887643      236789999999999999999999999999875                     


Q ss_pred             ccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcC-ChhHHHHHHHHH
Q 020768          126 MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGA-GPIGLVTMLGAR  202 (321)
Q Consensus       126 ~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Ga-g~vG~~a~qla~  202 (321)
                              ..|+|++|+.++.++++++|+++++.+++.+. ...++++++ +...+++|++|+|+|+ |.+|++++++++
T Consensus        55 --------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~  126 (288)
T smart00829       55 --------APGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQ  126 (288)
T ss_pred             --------cCCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHH
Confidence                    24899999999999999999999999888664 677888887 5688999999999997 999999999999


Q ss_pred             HcCCCeEEEEeCChhHHHHHHHcCC--CeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCE
Q 020768          203 AFGAPRIVIVDVDDYRLSVAKELGA--DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGK  280 (321)
Q Consensus       203 ~~g~~~vv~v~~~~~~~~~~~~~g~--~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~  280 (321)
                      +.|+ .++++++++++.++++++|+  +.+++...  .++.+.+.+..  .+.++|+++|++++ ..+...+++++++|+
T Consensus       127 ~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~--~~~~~d~vi~~~~~-~~~~~~~~~l~~~g~  200 (288)
T smart00829      127 HLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSRD--LSFADEILRAT--GGRGVDVVLNSLAG-EFLDASLRCLAPGGR  200 (288)
T ss_pred             HcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCCC--ccHHHHHHHHh--CCCCcEEEEeCCCH-HHHHHHHHhccCCcE
Confidence            9999 68888889999999999998  66666432  34555554432  24579999999995 688899999999999


Q ss_pred             EEEEcCCCC--CccccchhhhccceEEEEeeh
Q 020768          281 VCLVGMGHL--EMTVPLTPAAARYLIYSFLFH  310 (321)
Q Consensus       281 ~v~~g~~~~--~~~~~~~~~~~k~~~i~g~~~  310 (321)
                      ++.+|....  ...++... +.+++++.+...
T Consensus       201 ~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~  231 (288)
T smart00829      201 FVEIGKRDIRDNSQLGMAP-FRRNVSYHAVDL  231 (288)
T ss_pred             EEEEcCcCCccccccchhh-hcCCceEEEEEH
Confidence            999996532  23444444 457777777644

Enoylreductase in Polyketide synthases.

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.93  E-value=1.5e-24  Score=193.74  Aligned_cols=199  Identities=31%  Similarity=0.375  Sum_probs=164.6

Q ss_pred             CCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEE
Q 020768           71 VKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCF  150 (321)
Q Consensus        71 ~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~  150 (321)
                      .++|.++|||++|+|+++|+++++|++||+|+..                               +.|++|+.++.+.++
T Consensus        18 ~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~-------------------------------~~~~~~~~v~~~~~~   66 (277)
T cd08255          18 LPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF-------------------------------GPHAERVVVPANLLV   66 (277)
T ss_pred             CcCCcccCcceeEEEEEeCCCCCCCCCCCEEEec-------------------------------CCcceEEEcCHHHee
Confidence            5689999999999999999999999999999865                               468999999999999


Q ss_pred             ECCCCCChhhhccchhhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcC-CCe
Q 020768          151 KLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG-ADN  229 (321)
Q Consensus       151 ~ip~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g-~~~  229 (321)
                      ++|+++++.+++.+.++.++|++++..++++|++++|+|+|++|++++++|+++|.++++++++++++.++++++| .+.
T Consensus        67 ~ip~~l~~~~aa~~~~~~ta~~~~~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~~~~  146 (277)
T cd08255          67 PLPDGLPPERAALTALAATALNGVRDAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADP  146 (277)
T ss_pred             ECcCCCCHHHhHHHHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCCCcc
Confidence            9999999988886677888999888889999999999988999999999999999954888999999999999999 454


Q ss_pred             EEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEee
Q 020768          230 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLF  309 (321)
Q Consensus       230 vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~  309 (321)
                      ++....          ..  ..+.++|++||+++....+...+++++++|+++.+|............+..+.+++.+..
T Consensus       147 ~~~~~~----------~~--~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  214 (277)
T cd08255         147 VAADTA----------DE--IGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEFHFKRLPIRSSQ  214 (277)
T ss_pred             ccccch----------hh--hcCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCCccccHHHHHhccCeEEeec
Confidence            443211          01  125679999999998788899999999999999999764431112234666777888776


Q ss_pred             hhH
Q 020768          310 HFF  312 (321)
Q Consensus       310 ~~~  312 (321)
                      ...
T Consensus       215 ~~~  217 (277)
T cd08255         215 VYG  217 (277)
T ss_pred             ccc
Confidence            543

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.90  E-value=6.7e-24  Score=162.94  Aligned_cols=109  Identities=39%  Similarity=0.698  Sum_probs=96.2

Q ss_pred             CCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCC
Q 020768           41 PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY  120 (321)
Q Consensus        41 ~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~  120 (321)
                      |+||||||++++||++|++++++..  ......|.++|||++|+|+++|+++++|++||+|++.+...|+.|.+|..+..
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~~--~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~   78 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGGP--PPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRP   78 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTSS--SSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTG
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhcc--ccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcc
Confidence            6899999999999999999999842  22267899999999999999999999999999999999889999999999999


Q ss_pred             CCCCCccccccCCCCCcceeEEEecCCcEEEC
Q 020768          121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKL  152 (321)
Q Consensus       121 ~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~i  152 (321)
                      ++|++...++. ..+|+|+||+++++++++++
T Consensus        79 ~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   79 NLCPNPEVLGL-GLDGGFAEYVVVPARNLVPV  109 (109)
T ss_dssp             GGTTTBEETTT-SSTCSSBSEEEEEGGGEEEE
T ss_pred             ccCCCCCEeEc-CCCCcccCeEEEehHHEEEC
Confidence            99998877765 48999999999999999875

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=99.90  E-value=1.6e-21  Score=167.83  Aligned_cols=240  Identities=18%  Similarity=0.173  Sum_probs=180.7

Q ss_pred             EEEEecCC-CCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccc----cceeEEEEEeCCCCCCCCCCCEEEEc
Q 020768           30 KIQPFELP-SLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG----HECAGVIEKVGSEVKTLVPGDRVALE  104 (321)
Q Consensus        30 ~~~e~~~p-~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G----~e~vG~V~~vG~~v~~~~~Gd~V~~~  104 (321)
                      +..+++++ .+++++||||.++.+..|.-...++-..  +...-.|+.+|    ..++|+|++  ++-.++++||.|+..
T Consensus        25 ~~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~--~~~y~~~~~~G~pi~g~GV~kVi~--S~~~~~~~GD~v~g~  100 (343)
T KOG1196|consen   25 TTTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPD--PSDYAPPYEPGKPIDGFGVAKVID--SGHPNYKKGDLVWGI  100 (343)
T ss_pred             eeeeecccCCCCCccEEeEeeeecCCHHHHhhccCCC--cccccCcccCCcEecCCceEEEEe--cCCCCCCcCceEEEe
Confidence            33445544 4599999999999998776543332211  11112234344    278999999  466789999999875


Q ss_pred             CCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCC--cEEECCC--CCChhh--hccchhhHHHHHHH-HHc
Q 020768          105 PGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD--LCFKLPD--NVSLEE--GAMCEPLSVGLHAC-RRA  177 (321)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~--~~~~ip~--~~~~~~--aa~~~~~~~a~~~l-~~~  177 (321)
                                                     -+|.||.++++.  ..++++.  ++++--  .++-++..|||..+ +..
T Consensus       101 -------------------------------~gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~  149 (343)
T KOG1196|consen  101 -------------------------------VGWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEIC  149 (343)
T ss_pred             -------------------------------ccceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhc
Confidence                                           389999998764  4444443  333333  33446888999887 568


Q ss_pred             CCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-HcCCCeEEecCCCcccHHHHHHHHHHHhCCCc
Q 020768          178 NIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (321)
Q Consensus       178 ~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~  255 (321)
                      ..+.|++|+|-|| |++|+++.|+|+.+|+ .||++..++||..+++ ++|.+..+||.+. .+..+++++.   ...|+
T Consensus       150 ~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~e-~~~~~aL~r~---~P~GI  224 (343)
T KOG1196|consen  150 SPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKEE-SDLSAALKRC---FPEGI  224 (343)
T ss_pred             CCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccCc-cCHHHHHHHh---CCCcc
Confidence            8999999999998 9999999999999999 8999999999999886 5899999999764 3666666653   47899


Q ss_pred             cEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC---Cccc---cchhhhccceEEEEeeh
Q 020768          256 DVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL---EMTV---PLTPAAARYLIYSFLFH  310 (321)
Q Consensus       256 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~~~---~~~~~~~k~~~i~g~~~  310 (321)
                      |+.||.+|+ ..+++.+..++.+||++.+|+-..   +.+.   +...++.|++.|+|++.
T Consensus       225 DiYfeNVGG-~~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv  284 (343)
T KOG1196|consen  225 DIYFENVGG-KMLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLV  284 (343)
T ss_pred             eEEEeccCc-HHHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEe
Confidence            999999998 799999999999999999996432   2222   23557899999999764

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.86  E-value=1.4e-21  Score=191.14  Aligned_cols=242  Identities=16%  Similarity=0.178  Sum_probs=192.8

Q ss_pred             CCeEEEEecCC--CC-CCCcEEEEEeEeecccccHhhhhccccCCcC----CCCCcccccceeEEEEEeCCCCCCCCCCC
Q 020768           27 NTLKIQPFELP--SL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFV----VKEPMVIGHECAGVIEKVGSEVKTLVPGD   99 (321)
Q Consensus        27 ~~l~~~e~~~p--~~-~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~----~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd   99 (321)
                      ..++|.|.|..  .| .++.=+--|.|+.+|++|+.+..|+...+..    .....++|-||+|+-          .-|.
T Consensus      1427 sSlrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGRd----------~~Gr 1496 (2376)
T KOG1202|consen 1427 SSLRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGRD----------ASGR 1496 (2376)
T ss_pred             cceeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeecccc----------CCCc
Confidence            56889888875  23 6666788999999999999999987654322    233568999999884          4499


Q ss_pred             EEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHHH-HHc
Q 020768          100 RVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRA  177 (321)
Q Consensus       100 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l-~~~  177 (321)
                      ||..+.                            .--++++.+.++.+.++.+|++...++|++.+ .++|+|+++ .+.
T Consensus      1497 RvM~mv----------------------------pAksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG 1548 (2376)
T KOG1202|consen 1497 RVMGMV----------------------------PAKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRG 1548 (2376)
T ss_pred             EEEEee----------------------------ehhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhc
Confidence            998762                            23578888999999999999999999999887 678999998 679


Q ss_pred             CCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCC----CeEEecCCCcccHHHHHHHHHHHhC
Q 020768          178 NIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA----DNIVKVSTNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       178 ~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~----~~vi~~~~~~~~~~~~~~~~~~~~~  252 (321)
                      .+++|+++||+++ |++|++|+.+|.++|+ .|+.+..+.||++++.+.-+    +.+-|  .++.+|...+  +..+.|
T Consensus      1549 ~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~N--SRdtsFEq~v--l~~T~G 1623 (2376)
T KOG1202|consen 1549 QMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFAN--SRDTSFEQHV--LWHTKG 1623 (2376)
T ss_pred             cccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhcccc--cccccHHHHH--HHHhcC
Confidence            9999999999955 9999999999999999 68999899999998875332    22222  3445555443  335679


Q ss_pred             CCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC--ccccchhhhccceEEEEeehhHH
Q 020768          253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE--MTVPLTPAAARYLIYSFLFHFFL  313 (321)
Q Consensus       253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~k~~~i~g~~~~~~  313 (321)
                      +|+|+|++...+ +.+++.++||+.+|||..+|-..-.  .++-++ .+.|+++++|.+.++.
T Consensus      1624 rGVdlVLNSLae-EkLQASiRCLa~~GRFLEIGKfDLSqNspLGMa-vfLkNvsfHGiLLDsv 1684 (2376)
T KOG1202|consen 1624 RGVDLVLNSLAE-EKLQASIRCLALHGRFLEIGKFDLSQNSPLGMA-VFLKNVSFHGILLDSV 1684 (2376)
T ss_pred             CCeeeehhhhhH-HHHHHHHHHHHhcCeeeeecceecccCCcchhh-hhhcccceeeeehhhh
Confidence            999999999985 7899999999999999999955433  344444 6779999999998764

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.75  E-value=1.8e-17  Score=131.10  Aligned_cols=122  Identities=27%  Similarity=0.443  Sum_probs=108.2

Q ss_pred             hhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHH
Q 020768          192 PIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTA  271 (321)
Q Consensus       192 ~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~  271 (321)
                      ++|++++|+|+++|. +|++++++++|+++++++|++.++++++  .++.+.++++.  .+.++|+||||+|++..++.+
T Consensus         1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~--~~~~~~i~~~~--~~~~~d~vid~~g~~~~~~~~   75 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD--DDFVEQIRELT--GGRGVDVVIDCVGSGDTLQEA   75 (130)
T ss_dssp             HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT--SSHHHHHHHHT--TTSSEEEEEESSSSHHHHHHH
T ss_pred             ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc--ccccccccccc--ccccceEEEEecCcHHHHHHH
Confidence            589999999999995 8999999999999999999999998755  45777777763  246899999999988999999


Q ss_pred             HHHcccCCEEEEEcCCC-CCccccchhhhccceEEEEeehhHHHhhcc
Q 020768          272 LSATRAGGKVCLVGMGH-LEMTVPLTPAAARYLIYSFLFHFFLIVLGY  318 (321)
Q Consensus       272 ~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~  318 (321)
                      +++++++|+++++|... ...+++...+++|++++.|++.+..+.+..
T Consensus        76 ~~~l~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~  123 (130)
T PF00107_consen   76 IKLLRPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGSPEDFQE  123 (130)
T ss_dssp             HHHEEEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGGHHHHHH
T ss_pred             HHHhccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCCHHHHHH
Confidence            99999999999999887 568899999999999999999998776654

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.40  E-value=7.5e-12  Score=119.20  Aligned_cols=132  Identities=16%  Similarity=0.196  Sum_probs=99.7

Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeE-EecCCCc-----------ccHHHHHH
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI-VKVSTNL-----------QDIAEEVE  245 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-i~~~~~~-----------~~~~~~~~  245 (321)
                      +..++++|+|+|+|.+|+++++.|+.+|+ .|++++.+++|++.++++|++.+ ++..+..           .++.+..+
T Consensus       161 G~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~  239 (509)
T PRK09424        161 GKVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM  239 (509)
T ss_pred             CCcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence            34689999999999999999999999999 79999999999999999999854 4432211           12222222


Q ss_pred             HHHHHhCCCccEEEEcCCCH-----HH-HHHHHHHcccCCEEEEEcCC-CCC--ccccchhhhc-cceEEEEeeh
Q 020768          246 KIQKAMGTGIDVSFDCAGFN-----KT-MSTALSATRAGGKVCLVGMG-HLE--MTVPLTPAAA-RYLIYSFLFH  310 (321)
Q Consensus       246 ~~~~~~~~~~d~vid~~g~~-----~~-~~~~~~~l~~~G~~v~~g~~-~~~--~~~~~~~~~~-k~~~i~g~~~  310 (321)
                      +......+++|++|+|++.+     .. .+..++.++++|+++.+|.. ++.  .+++..+++. +++++.|..+
T Consensus       240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n  314 (509)
T PRK09424        240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTD  314 (509)
T ss_pred             HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCC
Confidence            22111125799999999963     35 48999999999999999974 443  4455556775 9999999765

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.12  E-value=1.1e-09  Score=101.93  Aligned_cols=115  Identities=15%  Similarity=0.194  Sum_probs=97.5

Q ss_pred             CCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       179 ~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      .-+|++|+|.|+|.+|+.+++.++.+|+ +|++++.++.|.+.++++|++.+ +.       .    +.    -.++|+|
T Consensus       199 ~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~~-------~----e~----v~~aDVV  261 (413)
T cd00401         199 MIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-TM-------E----EA----VKEGDIF  261 (413)
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-cH-------H----HH----HcCCCEE
Confidence            4689999999999999999999999999 68889999999999999998432 11       1    11    1358999


Q ss_pred             EEcCCCHHHHHHH-HHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehhH
Q 020768          259 FDCAGFNKTMSTA-LSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFF  312 (321)
Q Consensus       259 id~~g~~~~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~  312 (321)
                      |+|+|+...+... +..++++|+++++|..  +.++|...+..+++++.|+..+.
T Consensus       262 I~atG~~~~i~~~~l~~mk~GgilvnvG~~--~~eId~~~L~~~el~i~g~~~~~  314 (413)
T cd00401         262 VTTTGNKDIITGEHFEQMKDGAIVCNIGHF--DVEIDVKGLKENAVEVVNIKPQV  314 (413)
T ss_pred             EECCCCHHHHHHHHHhcCCCCcEEEEeCCC--CCccCHHHHHhhccEEEEccCCc
Confidence            9999998888865 9999999999999954  56899998999999999998864

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.69  E-value=3.8e-07  Score=87.08  Aligned_cols=129  Identities=16%  Similarity=0.162  Sum_probs=90.0

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCC------------cccHHHHHHHH
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTN------------LQDIAEEVEKI  247 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~------------~~~~~~~~~~~  247 (321)
                      .++++++|+|+|.+|+++++.++.+|+ .|++++.+.++++.++++|++.+......            ..++.+...++
T Consensus       162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~  240 (511)
T TIGR00561       162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL  240 (511)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence            467899999999999999999999999 59999999999999999998763221110            12233222232


Q ss_pred             HHHhCCCccEEEEcC---CCHH---HHHHHHHHcccCCEEEEEcCCC-CCccccc-hh-hhc-cceEEEEee
Q 020768          248 QKAMGTGIDVSFDCA---GFNK---TMSTALSATRAGGKVCLVGMGH-LEMTVPL-TP-AAA-RYLIYSFLF  309 (321)
Q Consensus       248 ~~~~~~~~d~vid~~---g~~~---~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~-~~-~~~-k~~~i~g~~  309 (321)
                      ......++|++|+|+   |.+.   ..+..++.+++|+.++.++... +..++.. .+ +.. .++++.|..
T Consensus       241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~GGn~E~t~p~~~~~~~~GV~~~gv~  312 (511)
T TIGR00561       241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQGGNCEYTKPGEVYTTENQVKVIGYT  312 (511)
T ss_pred             HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCCCCEEEecCceEEEecCCEEEEeeC
Confidence            222246799999999   6544   5667899999999999998543 3322221 11 222 358888764

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.47  E-value=2.7e-06  Score=79.71  Aligned_cols=104  Identities=22%  Similarity=0.293  Sum_probs=80.6

Q ss_pred             HHHHHHHc-CCC-CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHH
Q 020768          170 GLHACRRA-NIG-PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKI  247 (321)
Q Consensus       170 a~~~l~~~-~~~-~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~  247 (321)
                      .|.++.++ ++. +|++|+|+|.|.+|..+++.++.+|+ +|++++.++.|...+...|+. +.+       .    .++
T Consensus       198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~~-------l----~ea  264 (425)
T PRK05476        198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VMT-------M----EEA  264 (425)
T ss_pred             hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ecC-------H----HHH
Confidence            45555544 444 89999999999999999999999999 699998888887777666754 221       1    122


Q ss_pred             HHHhCCCccEEEEcCCCHHHHH-HHHHHcccCCEEEEEcCCCCC
Q 020768          248 QKAMGTGIDVSFDCAGFNKTMS-TALSATRAGGKVCLVGMGHLE  290 (321)
Q Consensus       248 ~~~~~~~~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~~  290 (321)
                      .    .++|++|+++|+...+. ..+..+++++.++..|....+
T Consensus       265 l----~~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d~E  304 (425)
T PRK05476        265 A----ELGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDNE  304 (425)
T ss_pred             H----hCCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCCCc
Confidence            1    36899999999877776 688999999999999976544

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=98.39  E-value=1.2e-05  Score=70.80  Aligned_cols=133  Identities=22%  Similarity=0.310  Sum_probs=87.2

Q ss_pred             cceeEEEecCCcEEECCCCCChhhhccchhhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh
Q 020768          137 SLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (321)
Q Consensus       137 ~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~  216 (321)
                      +|.+|.. +...++.+++++++..+..-.+.. .+..+.. .+.++++||-+|+|. |.+++.+++ .|...+++++.++
T Consensus        78 ~~~~~~~-~~~~~i~i~p~~afgtg~h~tt~~-~l~~l~~-~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDis~  152 (250)
T PRK00517         78 SWEDPPD-PDEINIELDPGMAFGTGTHPTTRL-CLEALEK-LVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDIDP  152 (250)
T ss_pred             CCcCCCC-CCeEEEEECCCCccCCCCCHHHHH-HHHHHHh-hcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEECCH
Confidence            3455544 667889999999888765332222 2333332 256899999999987 888876554 6776799999999


Q ss_pred             hHHHHHHHc----CCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCH---HHHHHHHHHcccCCEEEEEcCCCC
Q 020768          217 YRLSVAKEL----GADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFN---KTMSTALSATRAGGKVCLVGMGHL  289 (321)
Q Consensus       217 ~~~~~~~~~----g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~~~~  289 (321)
                      ...+.+++.    +....+....               +...+|+|+.+....   ..++.+.+.|+++|.+++.|....
T Consensus       153 ~~l~~A~~n~~~~~~~~~~~~~~---------------~~~~fD~Vvani~~~~~~~l~~~~~~~LkpgG~lilsgi~~~  217 (250)
T PRK00517        153 QAVEAARENAELNGVELNVYLPQ---------------GDLKADVIVANILANPLLELAPDLARLLKPGGRLILSGILEE  217 (250)
T ss_pred             HHHHHHHHHHHHcCCCceEEEcc---------------CCCCcCEEEEcCcHHHHHHHHHHHHHhcCCCcEEEEEECcHh
Confidence            888877653    2211111100               012589998765543   346678899999999999886543

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.39  E-value=1.6e-05  Score=71.63  Aligned_cols=111  Identities=18%  Similarity=0.182  Sum_probs=84.7

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      .+.+++|+|.|.+|..+++.++.+|+ .|.+++++.++.+.++++|++.+ .+        +.+.+.    -.++|+||+
T Consensus       151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~--------~~l~~~----l~~aDiVI~  216 (296)
T PRK08306        151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL--------SELAEE----VGKIDIIFN  216 (296)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH--------HHHHHH----hCCCCEEEE
Confidence            58999999999999999999999999 78889999888888888887532 11        112222    246899999


Q ss_pred             cCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEE
Q 020768          261 CAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSF  307 (321)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g  307 (321)
                      +++..-.-...++.+++++.++.++...+...+  ...-.+++++.+
T Consensus       217 t~p~~~i~~~~l~~~~~g~vIIDla~~pggtd~--~~a~~~Gv~~~~  261 (296)
T PRK08306        217 TIPALVLTKEVLSKMPPEALIIDLASKPGGTDF--EYAEKRGIKALL  261 (296)
T ss_pred             CCChhhhhHHHHHcCCCCcEEEEEccCCCCcCe--eehhhCCeEEEE
Confidence            998644445777889999999999977665554  334556777775

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=98.33  E-value=1.7e-06  Score=78.60  Aligned_cols=108  Identities=25%  Similarity=0.304  Sum_probs=82.5

Q ss_pred             CcEEECCCCCChhhhccchhhHHHHHHHHHcCC----CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHH-HH
Q 020768          147 DLCFKLPDNVSLEEGAMCEPLSVGLHACRRANI----GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRL-SV  221 (321)
Q Consensus       147 ~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~~~~----~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~-~~  221 (321)
                      +.++++|+.+..+.++...+.++++.+++.+..    -++.+|+|+|+|.+|..+++.++..|...|++++++.++. ++
T Consensus       139 ~~a~~~~k~vr~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~l  218 (311)
T cd05213         139 QKAIKVGKRVRTETGISRGAVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEEL  218 (311)
T ss_pred             HHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence            567788899998888888888888888765433    4789999999999999999999998877888899987764 67


Q ss_pred             HHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHH
Q 020768          222 AKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKT  267 (321)
Q Consensus       222 ~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~  267 (321)
                      ++++|.. ++++    .+    +.+.    -...|+||.|++.+..
T Consensus       219 a~~~g~~-~~~~----~~----~~~~----l~~aDvVi~at~~~~~  251 (311)
T cd05213         219 AKELGGN-AVPL----DE----LLEL----LNEADVVISATGAPHY  251 (311)
T ss_pred             HHHcCCe-EEeH----HH----HHHH----HhcCCEEEECCCCCch
Confidence            8888873 3321    11    2121    1347999999998765

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=98.29  E-value=3.4e-08  Score=93.21  Aligned_cols=161  Identities=21%  Similarity=0.235  Sum_probs=107.8

Q ss_pred             cccccceeEEEEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEE---
Q 020768           75 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFK---  151 (321)
Q Consensus        75 ~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~---  151 (321)
                      ..-|.|+++.+.+++.++++     +|++.+.. |++|++|    +..|.+.+..|. ..++.|++++.++. .+..   
T Consensus        88 ~~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~~g~-~l~~lf~~a~~~~k-~vr~~t~  155 (417)
T TIGR01035        88 ILTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKTVGK-VLERLFQKAFSVGK-RVRTETD  155 (417)
T ss_pred             hcCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCCchH-HHHHHHHHHHHHhh-hhhhhcC
Confidence            46789999999999999877     55555555 8999999    555666555543 46789999988775 2222   


Q ss_pred             C-CCCCChhhhccchhhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHH-HHHHcCCCe
Q 020768          152 L-PDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADN  229 (321)
Q Consensus       152 i-p~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~-~~~~~g~~~  229 (321)
                      + +..++...+|       .-.+.+.....++++++|+|+|.+|..+++.++..|+..+++++++.++.+ +++++|.. 
T Consensus       156 i~~~~vSv~~~A-------v~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-  227 (417)
T TIGR01035       156 ISAGAVSISSAA-------VELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-  227 (417)
T ss_pred             CCCCCcCHHHHH-------HHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-
Confidence            2 2222222111       001123334467899999999999999999999999768889988887744 77778764 


Q ss_pred             EEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHH
Q 020768          230 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKT  267 (321)
Q Consensus       230 vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~  267 (321)
                      .+..    .+    +.+.    -.++|+||+|++.+..
T Consensus       228 ~i~~----~~----l~~~----l~~aDvVi~aT~s~~~  253 (417)
T TIGR01035       228 AVKF----ED----LEEY----LAEADIVISSTGAPHP  253 (417)
T ss_pred             EeeH----HH----HHHH----HhhCCEEEECCCCCCc
Confidence            2221    11    2121    1368999999987654

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>TIGR00936 ahcY adenosylhomocysteinase

Probab=98.29  E-value=1.8e-05  Score=73.79  Aligned_cols=101  Identities=20%  Similarity=0.286  Sum_probs=78.2

Q ss_pred             CCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       179 ~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      ...|++|+|.|.|.+|..+++.++.+|+ +|++++.++.+...+...|+. +.+       ..+.+        .+.|++
T Consensus       192 ~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-------leeal--------~~aDVV  254 (406)
T TIGR00936       192 LIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT-------MEEAA--------KIGDIF  254 (406)
T ss_pred             CCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC-------HHHHH--------hcCCEE
Confidence            4689999999999999999999999999 688898888887777777763 221       11111        357999


Q ss_pred             EEcCCCHHHHHH-HHHHcccCCEEEEEcCCCCCccccchhh
Q 020768          259 FDCAGFNKTMST-ALSATRAGGKVCLVGMGHLEMTVPLTPA  298 (321)
Q Consensus       259 id~~g~~~~~~~-~~~~l~~~G~~v~~g~~~~~~~~~~~~~  298 (321)
                      |+++|+...+.. .+..+++++.++.+|...  .++|...+
T Consensus       255 ItaTG~~~vI~~~~~~~mK~GailiN~G~~~--~eId~~aL  293 (406)
T TIGR00936       255 ITATGNKDVIRGEHFENMKDGAIVANIGHFD--VEIDVKAL  293 (406)
T ss_pred             EECCCCHHHHHHHHHhcCCCCcEEEEECCCC--ceeCHHHH
Confidence            999999887774 889999999999999653  34554443

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=98.11  E-value=3.2e-06  Score=83.22  Aligned_cols=100  Identities=22%  Similarity=0.360  Sum_probs=65.4

Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC---------------------hhHHHHHHHcCCCeEEecCCC
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD---------------------DYRLSVAKELGADNIVKVSTN  236 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~---------------------~~~~~~~~~~g~~~vi~~~~~  236 (321)
                      ..++|++|+|+|+|++|+.+++.++..|+ .|++++..                     +++.+.++++|++..++....
T Consensus       133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~  211 (564)
T PRK12771        133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG  211 (564)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence            36789999999999999999999999999 47777742                     356677889998765542210


Q ss_pred             cccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEc
Q 020768          237 LQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                       .+..  ...+    ..++|+||+++|........+.....+|.+..++
T Consensus       212 -~~~~--~~~~----~~~~D~Vi~AtG~~~~~~~~i~g~~~~gv~~~~~  253 (564)
T PRK12771        212 -EDIT--LEQL----EGEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAVD  253 (564)
T ss_pred             -CcCC--HHHH----HhhCCEEEEeeCCCCCCcCCCCCCccCCcEEHHH
Confidence             1111  1111    2358999999997543333333334444444443

>PLN02494 adenosylhomocysteinase

Probab=98.08  E-value=3.9e-05  Score=72.37  Aligned_cols=92  Identities=18%  Similarity=0.272  Sum_probs=74.2

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      -.|++++|+|.|.+|..+++.++.+|+ +|++++.++.+...+...|+..+ .       ..+.+        ...|+++
T Consensus       252 LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~vv-~-------leEal--------~~ADVVI  314 (477)
T PLN02494        252 IAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQVL-T-------LEDVV--------SEADIFV  314 (477)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCeec-c-------HHHHH--------hhCCEEE
Confidence            579999999999999999999999999 68889888887777777776521 1       11111        2479999


Q ss_pred             EcCCCHHHH-HHHHHHcccCCEEEEEcCCC
Q 020768          260 DCAGFNKTM-STALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       260 d~~g~~~~~-~~~~~~l~~~G~~v~~g~~~  288 (321)
                      ++.|+...+ ...+..+++++.++.+|..+
T Consensus       315 ~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~  344 (477)
T PLN02494        315 TTTGNKDIIMVDHMRKMKNNAIVCNIGHFD  344 (477)
T ss_pred             ECCCCccchHHHHHhcCCCCCEEEEcCCCC
Confidence            999986654 78999999999999999654

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=97.98  E-value=4.5e-05  Score=67.94  Aligned_cols=104  Identities=22%  Similarity=0.371  Sum_probs=73.7

Q ss_pred             HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCC-eEEEEeCChhHHHHHHHc----CCCeEEecCCCcccHHHHHHHHHH
Q 020768          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAP-RIVIVDVDDYRLSVAKEL----GADNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~-~vv~v~~~~~~~~~~~~~----g~~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      ..+.+++|++||.+|+|. |..++++++..|.. .|++++.+++..+.+++.    +.+.+....   .+    +.++. 
T Consensus        71 ~~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~---~d----~~~l~-  141 (272)
T PRK11873         71 ALAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRL---GE----IEALP-  141 (272)
T ss_pred             hhccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEE---cc----hhhCC-
Confidence            346789999999999987 88888888887753 699999999998888763    433322111   11    11111 


Q ss_pred             HhCCCccEEEEcC------CCHHHHHHHHHHcccCCEEEEEcCC
Q 020768          250 AMGTGIDVSFDCA------GFNKTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       250 ~~~~~~d~vid~~------g~~~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      .....+|+|+...      .....++.+.+.|++||++++.+..
T Consensus       142 ~~~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~  185 (272)
T PRK11873        142 VADNSVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVV  185 (272)
T ss_pred             CCCCceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEee
Confidence            1135799998643      2346799999999999999997754

>PRK08324 short chain dehydrogenase; Validated

Probab=97.98  E-value=7.8e-05  Score=75.08  Aligned_cols=142  Identities=23%  Similarity=0.280  Sum_probs=87.3

Q ss_pred             CcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHHHHHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeC
Q 020768          136 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV  214 (321)
Q Consensus       136 G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~  214 (321)
                      -++++|..+++..++.+ +.++.+++....        .......+|+++||+|+ |++|..+++.+...|+ .|+++++
T Consensus       385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~--------~~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~r  454 (681)
T PRK08324        385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQR--------MPKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLADL  454 (681)
T ss_pred             hhcCCccCCChhhhcce-eeehhhhhhhhc--------CCCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEeC
Confidence            45567777777766666 555555544210        00122346899999998 9999999999999999 6888888


Q ss_pred             ChhHHHHHH-HcCC--C-eEEecCC-CcccHHHHHHHHHHHhCCCccEEEEcCCC-------------------------
Q 020768          215 DDYRLSVAK-ELGA--D-NIVKVST-NLQDIAEEVEKIQKAMGTGIDVSFDCAGF-------------------------  264 (321)
Q Consensus       215 ~~~~~~~~~-~~g~--~-~vi~~~~-~~~~~~~~~~~~~~~~~~~~d~vid~~g~-------------------------  264 (321)
                      +.++.+.+. +++.  . ..+..+- +..+..+.+.+.... .+++|++|+++|.                         
T Consensus       455 ~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~-~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~  533 (681)
T PRK08324        455 DEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALA-FGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGH  533 (681)
T ss_pred             CHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHH-cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHH
Confidence            887765543 3443  1 1121111 122233333333222 3579999999982                         


Q ss_pred             HHHHHHHHHHccc---CCEEEEEcCCC
Q 020768          265 NKTMSTALSATRA---GGKVCLVGMGH  288 (321)
Q Consensus       265 ~~~~~~~~~~l~~---~G~~v~~g~~~  288 (321)
                      ...++.+++.++.   +|+++++++..
T Consensus       534 ~~l~~~~~~~l~~~~~~g~iV~vsS~~  560 (681)
T PRK08324        534 FLVAREAVRIMKAQGLGGSIVFIASKN  560 (681)
T ss_pred             HHHHHHHHHHHHhcCCCcEEEEECCcc
Confidence            1234455666655   68999998643

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=97.96  E-value=9.5e-05  Score=62.25  Aligned_cols=104  Identities=18%  Similarity=0.220  Sum_probs=78.4

Q ss_pred             HHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHH----HHHHcCCCeEEecC-CCcccHHHHH
Q 020768          170 GLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS----VAKELGADNIVKVS-TNLQDIAEEV  244 (321)
Q Consensus       170 a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~----~~~~~g~~~vi~~~-~~~~~~~~~~  244 (321)
                      ....++...+++|++||=+|+|. |+.++-+|+..+  .|+.+++.++-.+    .++.+|...+.... +....|.   
T Consensus        61 vA~m~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~~G~~---  134 (209)
T COG2518          61 VARMLQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTVRHGDGSKGWP---  134 (209)
T ss_pred             HHHHHHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCcccCCC---
Confidence            34456778999999999999755 999999999988  6999999887433    45678886544322 2222211   


Q ss_pred             HHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEc
Q 020768          245 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       245 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                            ...+||.++-+.+.+..-+.+++.|++||+++..=
T Consensus       135 ------~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~Pv  169 (209)
T COG2518         135 ------EEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIPV  169 (209)
T ss_pred             ------CCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEEE
Confidence                  13679999998888777789999999999998874

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.88  E-value=0.00021  Score=66.43  Aligned_cols=118  Identities=20%  Similarity=0.262  Sum_probs=77.2

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-HcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      ++.+|+|+|+|.+|+.+++.++.+|+ .|++++++.++.+.+. .++......+.    + .+.+.+.    -..+|++|
T Consensus       166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~----~-~~~l~~~----l~~aDvVI  235 (370)
T TIGR00518       166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYS----N-AYEIEDA----VKRADLLI  235 (370)
T ss_pred             CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccC----C-HHHHHHH----HccCCEEE
Confidence            34569999999999999999999999 6888999988877665 45543221111    1 1122222    14689999


Q ss_pred             EcC---CC--HH-HHHHHHHHcccCCEEEEEcCC-CCCcccc------chhhhccceEEEEe
Q 020768          260 DCA---GF--NK-TMSTALSATRAGGKVCLVGMG-HLEMTVP------LTPAAARYLIYSFL  308 (321)
Q Consensus       260 d~~---g~--~~-~~~~~~~~l~~~G~~v~~g~~-~~~~~~~------~~~~~~k~~~i~g~  308 (321)
                      +|+   +.  +. .-...++.+++++.++.++.. ++..+..      .--+...++++.+.
T Consensus       236 ~a~~~~g~~~p~lit~~~l~~mk~g~vIvDva~d~GG~~e~~~~t~~d~p~~~~~Gv~~~~v  297 (370)
T TIGR00518       236 GAVLIPGAKAPKLVSNSLVAQMKPGAVIVDVAIDQGGCVETSRPTTHDQPTYAVHDVVHYCV  297 (370)
T ss_pred             EccccCCCCCCcCcCHHHHhcCCCCCEEEEEecCCCCCccCCcCCCCCCCEEEECCeEEEEe
Confidence            997   32  11 136777889999999999854 3332221      11234457777766

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK05993 short chain dehydrogenase; Provisional

Probab=97.83  E-value=0.0004  Score=61.90  Aligned_cols=106  Identities=15%  Similarity=0.232  Sum_probs=69.6

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEE-ecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV-KVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi-~~~~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      .+++++|+|+ |++|...++.+...|. .|++++++.++.+.+.+.+...+. |+. +..+..+.+.++.+..++.+|++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~-d~~~~~~~~~~~~~~~~g~id~l   80 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYA-EPESIAALVAQVLELSGGRLDAL   80 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCC-CHHHHHHHHHHHHHHcCCCccEE
Confidence            4678999999 9999999999888998 688888888887777665654332 222 22233333444333334579999


Q ss_pred             EEcCCCHH-------------------------HHHHHHHHccc--CCEEEEEcCCC
Q 020768          259 FDCAGFNK-------------------------TMSTALSATRA--GGKVCLVGMGH  288 (321)
Q Consensus       259 id~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~~  288 (321)
                      |.+.|...                         ..+.++..+..  .|+++.+++..
T Consensus        81 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~  137 (277)
T PRK05993         81 FNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSIL  137 (277)
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChh
Confidence            99876310                         13345555543  47899998643

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.80  E-value=2.6e-05  Score=73.92  Aligned_cols=161  Identities=19%  Similarity=0.251  Sum_probs=103.1

Q ss_pred             cccccceeEEEEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCC
Q 020768           75 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD  154 (321)
Q Consensus        75 ~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~  154 (321)
                      ..-|+|+++.+.+++.++++.-+|+.=+      |++|+.    -+..|.+.+..+. ..++.|++.+.+        |+
T Consensus        90 ~~~g~ea~~hl~~V~~GldS~V~GE~qI------lgQvk~----a~~~a~~~g~~g~-~l~~lf~~a~~~--------~k  150 (423)
T PRK00045         90 VHEGEEAVRHLFRVASGLDSMVLGEPQI------LGQVKD----AYALAQEAGTVGT-ILNRLFQKAFSV--------AK  150 (423)
T ss_pred             hcCCHHHHHHHHHHHhhhhhhhcCChHH------HHHHHH----HHHHHHHcCCchH-HHHHHHHHHHHH--------Hh
Confidence            4679999999999999988755555332      334331    1222333322221 234555554433        34


Q ss_pred             CCChhhhccchhhHHHHHHHHHcC----CCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHH-HHHHcCCCe
Q 020768          155 NVSLEEGAMCEPLSVGLHACRRAN----IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADN  229 (321)
Q Consensus       155 ~~~~~~aa~~~~~~~a~~~l~~~~----~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~-~~~~~g~~~  229 (321)
                      .+..+.+....+.++++.+++.+.    -.++++|+|+|+|.+|.++++.++..|+..+++++++.++.+ +++++|.+ 
T Consensus       151 ~v~~~t~i~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-  229 (423)
T PRK00045        151 RVRTETGIGAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-  229 (423)
T ss_pred             hHhhhcCCCCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-
Confidence            444444444446777777775432    257899999999999999999999999878888889888755 77788864 


Q ss_pred             EEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHH
Q 020768          230 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKT  267 (321)
Q Consensus       230 vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~  267 (321)
                      ++.+    .+    +.+.    -.++|+||+|+|.+..
T Consensus       230 ~~~~----~~----~~~~----l~~aDvVI~aT~s~~~  255 (423)
T PRK00045        230 AIPL----DE----LPEA----LAEADIVISSTGAPHP  255 (423)
T ss_pred             EeeH----HH----HHHH----hccCCEEEECCCCCCc
Confidence            3321    11    1111    1468999999998653

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.76  E-value=0.0005  Score=61.66  Aligned_cols=110  Identities=17%  Similarity=0.152  Sum_probs=78.6

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      .|++++|+|.|.+|..++..++.+|+ .|.+.+++.++.+.+.++|...+ .       +. .+.+.    -...|+||+
T Consensus       150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~-------~~-~l~~~----l~~aDiVin  215 (287)
T TIGR02853       150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-P-------LN-KLEEK----VAEIDIVIN  215 (287)
T ss_pred             CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-c-------HH-HHHHH----hccCCEEEE
Confidence            47899999999999999999999998 78888888888777777765421 1       11 12222    246899999


Q ss_pred             cCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEE
Q 020768          261 CAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYS  306 (321)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~  306 (321)
                      +++..-.-...++.++++..++.+++..++..+  ...-.++++..
T Consensus       216 t~P~~ii~~~~l~~~k~~aliIDlas~Pg~tdf--~~Ak~~G~~a~  259 (287)
T TIGR02853       216 TIPALVLTADVLSKLPKHAVIIDLASKPGGTDF--EYAKKRGIKAL  259 (287)
T ss_pred             CCChHHhCHHHHhcCCCCeEEEEeCcCCCCCCH--HHHHHCCCEEE
Confidence            997532224567788999899999976665555  34445555544

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=97.72  E-value=0.00095  Score=58.68  Aligned_cols=115  Identities=23%  Similarity=0.303  Sum_probs=73.9

Q ss_pred             CCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcC----CC-eEEecCCCcccHHHHHHHHHHHhC
Q 020768          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELG----AD-NIVKVSTNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       180 ~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g----~~-~vi~~~~~~~~~~~~~~~~~~~~~  252 (321)
                      ..+.+++|+|| +++|...+..+...|. .++.+.++.+|++.+ +++.    .. .++..|-.+.+-.+.+.+.....+
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            46789999999 9999999999999999 688888999987754 3443    22 244444333333333333222234


Q ss_pred             CCccEEEEcCCCHH-------------------------HHHHHHHH-cc-cCCEEEEEcCCCCCccccc
Q 020768          253 TGIDVSFDCAGFNK-------------------------TMSTALSA-TR-AGGKVCLVGMGHLEMTVPL  295 (321)
Q Consensus       253 ~~~d~vid~~g~~~-------------------------~~~~~~~~-l~-~~G~~v~~g~~~~~~~~~~  295 (321)
                      ..+|+.++++|-..                         .-...+.- +. ..|.++.+++..+..+.+.
T Consensus        83 ~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~  152 (265)
T COG0300          83 GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPY  152 (265)
T ss_pred             CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcc
Confidence            57999999998641                         11122222 22 2589999998766555443

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.72  E-value=0.00077  Score=57.06  Aligned_cols=104  Identities=20%  Similarity=0.367  Sum_probs=72.7

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHH----HcC-CCeEEecCCCcccHHHHHHHH
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAK----ELG-ADNIVKVSTNLQDIAEEVEKI  247 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~----~~g-~~~vi~~~~~~~~~~~~~~~~  247 (321)
                      +.+..+.++++||-+|+|. |.+++++++..+. ..+++++.+++..+.++    .++ .+.+.....   +..+.+.. 
T Consensus        33 l~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~---d~~~~l~~-  107 (198)
T PRK00377         33 LSKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKG---EAPEILFT-  107 (198)
T ss_pred             HHHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEe---chhhhHhh-
Confidence            4567889999999999988 9999999987642 37999999998887654    456 333332221   22222221 


Q ss_pred             HHHhCCCccEEEEcCCC---HHHHHHHHHHcccCCEEEEEc
Q 020768          248 QKAMGTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       248 ~~~~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  285 (321)
                         ....+|.||...+.   ...+..+.+.|+++|+++...
T Consensus       108 ---~~~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~  145 (198)
T PRK00377        108 ---INEKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVIDA  145 (198)
T ss_pred             ---cCCCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEEEe
Confidence               23579999986553   346778889999999998643

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.69  E-value=0.00072  Score=56.75  Aligned_cols=115  Identities=16%  Similarity=0.179  Sum_probs=80.2

Q ss_pred             CCCEEEEEcC--ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-HcCCCeE-EecCCCcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA--GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADNI-VKVSTNLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga--g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~g~~~v-i~~~~~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      ....|||+|+  |++|++.+.-....|+ .|+++.++-++...+. ++|.... +|. +.+++..+...++.+...+..|
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV-~~~~~V~~v~~evr~~~~Gkld   83 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDV-SKPEEVVTVSGEVRANPDGKLD   83 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEecc-CChHHHHHHHHHHhhCCCCceE
Confidence            4568999976  9999998888888899 7999988888877554 7885432 232 2334555555555544467799


Q ss_pred             EEEEcCCCHH-------------------------HHHHHH-HHcccCCEEEEEcCCCCCccccchh
Q 020768          257 VSFDCAGFNK-------------------------TMSTAL-SATRAGGKVCLVGMGHLEMTVPLTP  297 (321)
Q Consensus       257 ~vid~~g~~~-------------------------~~~~~~-~~l~~~G~~v~~g~~~~~~~~~~~~  297 (321)
                      +.++..|-+=                         ..++.. .+.+..|+|+.+|+..+-.+++...
T Consensus        84 ~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf~~  150 (289)
T KOG1209|consen   84 LLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPFGS  150 (289)
T ss_pred             EEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccchhh
Confidence            9999888641                         122222 3457889999999887766766654

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.69  E-value=0.0014  Score=56.74  Aligned_cols=106  Identities=22%  Similarity=0.224  Sum_probs=68.0

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHc---CCCeEEecCCC-cccHHHHHHHHHHHhCCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GADNIVKVSTN-LQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~---g~~~vi~~~~~-~~~~~~~~~~~~~~~~~~  254 (321)
                      .+++++|+|+ |++|..+++.+...|+ .|+.+++++++.+.+ +++   +.-..+..+-. .....+.+.+... ..++
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~~   81 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAK-VLNA   81 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHH-HhCC
Confidence            4689999998 9999999999999999 688888887766544 322   21122222211 1222222222222 1356


Q ss_pred             ccEEEEcCCCH-----------------------HHHHHHHHHcccCCEEEEEcCCC
Q 020768          255 IDVSFDCAGFN-----------------------KTMSTALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       255 ~d~vid~~g~~-----------------------~~~~~~~~~l~~~G~~v~~g~~~  288 (321)
                      +|.++.+.|..                       ..++..+..++++|+++.++...
T Consensus        82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~  138 (238)
T PRK05786         82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS  138 (238)
T ss_pred             CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence            89999988742                       12455666777889999998653

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.60  E-value=0.00046  Score=65.43  Aligned_cols=93  Identities=19%  Similarity=0.284  Sum_probs=72.8

Q ss_pred             CCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       179 ~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      .-.|++++|+|.|.+|..+++.++.+|+ +|++++.++.+...+...|+.. .       ++.    ++.    ...|++
T Consensus       251 ~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~-~-------~le----ell----~~ADIV  313 (476)
T PTZ00075        251 MIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQV-V-------TLE----DVV----ETADIF  313 (476)
T ss_pred             CcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCcee-c-------cHH----HHH----hcCCEE
Confidence            4579999999999999999999999999 6888888777765555566532 1       111    221    358999


Q ss_pred             EEcCCCHHHHH-HHHHHcccCCEEEEEcCCC
Q 020768          259 FDCAGFNKTMS-TALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       259 id~~g~~~~~~-~~~~~l~~~G~~v~~g~~~  288 (321)
                      +.++|+...+. ..+..+++++.++.+|-..
T Consensus       314 I~atGt~~iI~~e~~~~MKpGAiLINvGr~d  344 (476)
T PTZ00075        314 VTATGNKDIITLEHMRRMKNNAIVGNIGHFD  344 (476)
T ss_pred             EECCCcccccCHHHHhccCCCcEEEEcCCCc
Confidence            99999877775 8899999999999999653

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.55  E-value=0.0013  Score=59.82  Aligned_cols=103  Identities=24%  Similarity=0.310  Sum_probs=74.1

Q ss_pred             HHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHH
Q 020768          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKI  247 (321)
Q Consensus       173 ~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~  247 (321)
                      .++...++++++||.+|+| .|..++.+++..+. ..|++++.+++..+.++    +.|.+.+.....   +..+.... 
T Consensus        72 ll~~L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g---D~~~~~~~-  146 (322)
T PRK13943         72 FMEWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG---DGYYGVPE-  146 (322)
T ss_pred             HHHhcCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC---Chhhcccc-
Confidence            3456778899999999997 59999999998764 25899999988766554    467665443322   22211111 


Q ss_pred             HHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEE
Q 020768          248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV  284 (321)
Q Consensus       248 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  284 (321)
                          ...+|+|+.+.+........++.|+++|+++..
T Consensus       147 ----~~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~  179 (322)
T PRK13943        147 ----FAPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  179 (322)
T ss_pred             ----cCCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence                246999999888766777889999999998774

>PRK06182 short chain dehydrogenase; Validated

Probab=97.54  E-value=0.0023  Score=56.82  Aligned_cols=81  Identities=23%  Similarity=0.267  Sum_probs=55.3

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeE-EecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI-VKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      .+.+++|+|+ |++|...++.+...|+ .|++++++.++.+.+.+.+...+ .|.. +..+..+.+.++.+ ..+++|++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~-~~~~~~~~~~~~~~-~~~~id~l   78 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVT-DEASIKAAVDTIIA-EEGRIDVL   78 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCC-CHHHHHHHHHHHHH-hcCCCCEE
Confidence            3678999998 9999999999888998 68888888877765555454332 2322 22333334444433 24579999


Q ss_pred             EEcCCC
Q 020768          259 FDCAGF  264 (321)
Q Consensus       259 id~~g~  264 (321)
                      |.+.|.
T Consensus        79 i~~ag~   84 (273)
T PRK06182         79 VNNAGY   84 (273)
T ss_pred             EECCCc
Confidence            999884

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=97.51  E-value=0.0039  Score=53.71  Aligned_cols=110  Identities=23%  Similarity=0.287  Sum_probs=72.6

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCC----eEEecCCCcccHHHHHHHHHHHhCCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGAD----NIVKVSTNLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~----~vi~~~~~~~~~~~~~~~~~~~~~~~  254 (321)
                      .++.++|+|| +++|.++++.+...|+ +++.+.++.+|++.+ .+++..    ..+|.. +.....+.+..+.+ ..+.
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVt-D~~~~~~~i~~~~~-~~g~   81 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVT-DRAAVEAAIEALPE-EFGR   81 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccC-CHHHHHHHHHHHHH-hhCc
Confidence            3577899999 9999999999999999 788888999887755 578831    223332 22333334444433 3567


Q ss_pred             ccEEEEcCCCHH-------------------------HHHHHHHHc--ccCCEEEEEcCCCCCccc
Q 020768          255 IDVSFDCAGFNK-------------------------TMSTALSAT--RAGGKVCLVGMGHLEMTV  293 (321)
Q Consensus       255 ~d~vid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~~~~~~  293 (321)
                      +|+.++..|--.                         ..+..+..+  +..|+++.+|+-.+..+.
T Consensus        82 iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y  147 (246)
T COG4221          82 IDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPY  147 (246)
T ss_pred             ccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccC
Confidence            999999888521                         122333332  345899999976554333

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=97.48  E-value=0.0016  Score=58.60  Aligned_cols=128  Identities=19%  Similarity=0.247  Sum_probs=76.9

Q ss_pred             CcEEECCCCCChhhhccchhhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHc-
Q 020768          147 DLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL-  225 (321)
Q Consensus       147 ~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~-  225 (321)
                      ...+.+.+++.+-..... .-......++. ...++++||-+|+|. |.+++.+++ .|...+++++.++...+.+++. 
T Consensus       127 ~~~i~ldpg~aFgtG~h~-tt~l~l~~l~~-~~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~  202 (288)
T TIGR00406       127 ALIIMLDPGLAFGTGTHP-TTSLCLEWLED-LDLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNA  202 (288)
T ss_pred             cEEEEECCCCcccCCCCH-HHHHHHHHHHh-hcCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHH
Confidence            344555555555443221 11111223333 245789999999977 888877665 5777899999999887776642 


Q ss_pred             ---CCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCH---HHHHHHHHHcccCCEEEEEcCC
Q 020768          226 ---GADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFN---KTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       226 ---g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                         +....+.....  +    ...   ....++|+|+......   ..+..+.+.|+++|.+++.|..
T Consensus       203 ~~n~~~~~~~~~~~--~----~~~---~~~~~fDlVvan~~~~~l~~ll~~~~~~LkpgG~li~sgi~  261 (288)
T TIGR00406       203 ELNQVSDRLQVKLI--Y----LEQ---PIEGKADVIVANILAEVIKELYPQFSRLVKPGGWLILSGIL  261 (288)
T ss_pred             HHcCCCcceEEEec--c----ccc---ccCCCceEEEEecCHHHHHHHHHHHHHHcCCCcEEEEEeCc
Confidence               22211111000  0    001   1135799999865443   3566778999999999998864

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=97.46  E-value=0.0016  Score=53.75  Aligned_cols=104  Identities=21%  Similarity=0.304  Sum_probs=74.1

Q ss_pred             HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCeEEecCCCcccHHHHHHHHHHH
Q 020768          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNIVKVSTNLQDIAEEVEKIQKA  250 (321)
Q Consensus       175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~vi~~~~~~~~~~~~~~~~~~~  250 (321)
                      -+.++++|+.++=+|+|. |..+++++...-..+++++++++++.+..    ++||.+.+.......   .+.+..    
T Consensus        28 s~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~A---p~~L~~----   99 (187)
T COG2242          28 SKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDA---PEALPD----   99 (187)
T ss_pred             HhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccc---hHhhcC----
Confidence            457889999777778754 66677888655555899999999988875    468887665544332   222222    


Q ss_pred             hCCCccEEEEcCCC--HHHHHHHHHHcccCCEEEEEcCC
Q 020768          251 MGTGIDVSFDCAGF--NKTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       251 ~~~~~d~vid~~g~--~~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                       -..+|.+|-.-|.  +..++.++..|+++|+++.-...
T Consensus       100 -~~~~daiFIGGg~~i~~ile~~~~~l~~ggrlV~nait  137 (187)
T COG2242         100 -LPSPDAIFIGGGGNIEEILEAAWERLKPGGRLVANAIT  137 (187)
T ss_pred             -CCCCCEEEECCCCCHHHHHHHHHHHcCcCCeEEEEeec
Confidence             1258999975554  35788999999999999987754

>PRK05693 short chain dehydrogenase; Provisional

Probab=97.45  E-value=0.0035  Score=55.64  Aligned_cols=79  Identities=22%  Similarity=0.280  Sum_probs=54.2

Q ss_pred             CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeE-EecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI-VKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      +++||+|+ |++|...++.+...|+ .|++++++.++.+.+...+...+ .|+. +..+..+.+..+.+ ..+++|++|+
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~~-~~~~id~vi~   78 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVN-DGAALARLAEELEA-EHGGLDVLIN   78 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCC-CHHHHHHHHHHHHH-hcCCCCEEEE
Confidence            47899998 9999999999988998 68888888877776665555433 2332 22333333333322 2357999999


Q ss_pred             cCCC
Q 020768          261 CAGF  264 (321)
Q Consensus       261 ~~g~  264 (321)
                      +.|.
T Consensus        79 ~ag~   82 (274)
T PRK05693         79 NAGY   82 (274)
T ss_pred             CCCC
Confidence            9983

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.39  E-value=0.0048  Score=54.75  Aligned_cols=114  Identities=23%  Similarity=0.277  Sum_probs=71.8

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH----HHHcCCCe-EEecCC---CcccHHHHHHHHHHHh
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGADN-IVKVST---NLQDIAEEVEKIQKAM  251 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~----~~~~g~~~-vi~~~~---~~~~~~~~~~~~~~~~  251 (321)
                      .|+.|+|+|| +++|..++.-.-..|+. ++.+.+..++++.    +++.+... ++.+.-   +.++..+.+..+. ..
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~~-l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~-~~   88 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGAK-LVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAI-RH   88 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCc-eEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHH-Hh
Confidence            5789999999 99999888888888985 5555555555444    44555443 332211   1223333332222 23


Q ss_pred             CCCccEEEEcCCCHH-------------------------HHHHHHHHcccC--CEEEEEcCCCCCccccch
Q 020768          252 GTGIDVSFDCAGFNK-------------------------TMSTALSATRAG--GKVCLVGMGHLEMTVPLT  296 (321)
Q Consensus       252 ~~~~d~vid~~g~~~-------------------------~~~~~~~~l~~~--G~~v~~g~~~~~~~~~~~  296 (321)
                      -+++|+.+++.|-..                         ....++..|++.  |+|+.+++..+...+|..
T Consensus        89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~  160 (282)
T KOG1205|consen   89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFR  160 (282)
T ss_pred             cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcc
Confidence            578999999988541                         234555666444  999999987776666654

>PRK12742 oxidoreductase; Provisional

Probab=97.37  E-value=0.0042  Score=53.62  Aligned_cols=102  Identities=21%  Similarity=0.277  Sum_probs=61.9

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEe-CChhHHH-HHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVD-VDDYRLS-VAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~-~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      .++++||+|+ |++|..+++.+...|++ ++.+. +++++.+ +..+++... +..+-  .+.. .+.++.+. .+++|+
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~~-v~~~~~~~~~~~~~l~~~~~~~~-~~~D~--~~~~-~~~~~~~~-~~~id~   78 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGAN-VRFTYAGSKDAAERLAQETGATA-VQTDS--ADRD-AVIDVVRK-SGALDI   78 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEecCCCHHHHHHHHHHhCCeE-EecCC--CCHH-HHHHHHHH-hCCCcE
Confidence            4689999998 99999999999999994 55543 3444443 334556543 22222  1222 22222221 356999


Q ss_pred             EEEcCCCHH-------------------------HHHHHHHHcccCCEEEEEcCCC
Q 020768          258 SFDCAGFNK-------------------------TMSTALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       258 vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~  288 (321)
                      +|++.|...                         ....+...++.+|+++.++...
T Consensus        79 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~  134 (237)
T PRK12742         79 LVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVN  134 (237)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccc
Confidence            999987521                         1123445566789999988643

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.34  E-value=0.0011  Score=52.51  Aligned_cols=95  Identities=18%  Similarity=0.207  Sum_probs=62.0

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCC--eEEecCCCcccHHHHHHHHHHHhCCCccE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGAD--NIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~--~vi~~~~~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      .+.+++|+|+|++|.+++..+...|++.+.++.++.+|.+.+ ++++..  ..+.+++    ..    +.    -..+|+
T Consensus        11 ~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~----~~----~~----~~~~Di   78 (135)
T PF01488_consen   11 KGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED----LE----EA----LQEADI   78 (135)
T ss_dssp             TTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG----HC----HH----HHTESE
T ss_pred             CCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH----HH----HH----HhhCCe
Confidence            588999999999999999999999998899999998876644 566433  2333321    11    11    135899


Q ss_pred             EEEcCCCHHH--HHHHHHHccc-CCEEEEEcCC
Q 020768          258 SFDCAGFNKT--MSTALSATRA-GGKVCLVGMG  287 (321)
Q Consensus       258 vid~~g~~~~--~~~~~~~l~~-~G~~v~~g~~  287 (321)
                      +|+|++.+..  -...+....+ -+.++.++.+
T Consensus        79 vI~aT~~~~~~i~~~~~~~~~~~~~~v~Dla~P  111 (135)
T PF01488_consen   79 VINATPSGMPIITEEMLKKASKKLRLVIDLAVP  111 (135)
T ss_dssp             EEE-SSTTSTSSTHHHHTTTCHHCSEEEES-SS
T ss_pred             EEEecCCCCcccCHHHHHHHHhhhhceeccccC
Confidence            9999887532  1122222222 1577777754

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=97.33  E-value=0.017  Score=51.95  Aligned_cols=182  Identities=13%  Similarity=0.117  Sum_probs=107.4

Q ss_pred             EEEEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCC----CCcccccc----CCCCCcceeEEEecCCcEEECCC
Q 020768           83 GVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLC----PEMKFFAT----PPVHGSLANQVVHPADLCFKLPD  154 (321)
Q Consensus        83 G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~----~~~~G~~~~~~~v~~~~~~~ip~  154 (321)
                      ++|++  +.+..+.+|.||+.+....         .+..+-    ++..+.-.    ....-.|-+|..+..+..+.-  
T Consensus        39 A~Vve--S~~~~i~vGerlyGy~P~a---------shl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y~~--  105 (314)
T PF11017_consen   39 ATVVE--SRHPGIAVGERLYGYFPMA---------SHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAYDP--  105 (314)
T ss_pred             EEEEe--eCCCCccCccEEEeecccc---------ceeEEeccccCCCccccChhhhCcCchhhhceeecCCCcccCc--
Confidence            77877  8888999999999863210         000000    01111111    112345666766665443311  


Q ss_pred             CCChhhhccchhhHHHHHHHHH---cCCCCCCEEEEEcC-ChhHHHHHHHHH-HcCCCeEEEEeCChhHHHHHHHcCC-C
Q 020768          155 NVSLEEGAMCEPLSVGLHACRR---ANIGPETNVLIMGA-GPIGLVTMLGAR-AFGAPRIVIVDVDDYRLSVAKELGA-D  228 (321)
Q Consensus       155 ~~~~~~aa~~~~~~~a~~~l~~---~~~~~g~~vlI~Ga-g~vG~~a~qla~-~~g~~~vv~v~~~~~~~~~~~~~g~-~  228 (321)
                      ......+.+-+-+.|+|..-+.   .+.-..+.|+|..| +-.++..+..++ ..+...+|++++..+ .++.+.+|+ +
T Consensus       106 ~~e~~~~LlrPLf~Tsfll~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglTS~~N-~~Fve~lg~Yd  184 (314)
T PF11017_consen  106 EREDWQMLLRPLFITSFLLDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLTSARN-VAFVESLGCYD  184 (314)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEecCcc-hhhhhccCCce
Confidence            1111112222445566644332   22333467777888 888888888888 555557888865554 458899995 7


Q ss_pred             eEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCC-EEEEEcCCCC
Q 020768          229 NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGG-KVCLVGMGHL  289 (321)
Q Consensus       229 ~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G-~~v~~g~~~~  289 (321)
                      .++.|++        +..+   ....--+++|..|+.+....+.+.++..= ..+.+|....
T Consensus       185 ~V~~Yd~--------i~~l---~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~  235 (314)
T PF11017_consen  185 EVLTYDD--------IDSL---DAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHW  235 (314)
T ss_pred             EEeehhh--------hhhc---cCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCc
Confidence            7887754        2222   12345799999999998889988888764 4666776543

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=97.28  E-value=0.0092  Score=45.81  Aligned_cols=103  Identities=21%  Similarity=0.319  Sum_probs=69.0

Q ss_pred             HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHH
Q 020768          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKA  250 (321)
Q Consensus       175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~~  250 (321)
                      ....+.++++++-+|+|. |..+..+++..+...+++++.+++..+.++    .++...+.....+..+   ....    
T Consensus        13 ~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~---~~~~----   84 (124)
T TIGR02469        13 SKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPE---ALED----   84 (124)
T ss_pred             HHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccc---cChh----
Confidence            445677888999999976 888999999875557999999988777654    3444332211111110   0111    


Q ss_pred             hCCCccEEEEcCCC---HHHHHHHHHHcccCCEEEEEc
Q 020768          251 MGTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       251 ~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      ....+|+|+...+.   ...++.+.+.|+++|++++-.
T Consensus        85 ~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~~  122 (124)
T TIGR02469        85 SLPEPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLNA  122 (124)
T ss_pred             hcCCCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEEe
Confidence            13479999975533   236888999999999988754

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=97.25  E-value=0.0013  Score=56.14  Aligned_cols=104  Identities=23%  Similarity=0.281  Sum_probs=69.0

Q ss_pred             HHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCC-eEEEEeCChhHHHHH----HHcCCCeEEecCCC-cccHHHHH
Q 020768          171 LHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAP-RIVIVDVDDYRLSVA----KELGADNIVKVSTN-LQDIAEEV  244 (321)
Q Consensus       171 ~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~-~vv~v~~~~~~~~~~----~~~g~~~vi~~~~~-~~~~~~~~  244 (321)
                      ...++.+.+++|++||-+|+|. |+.++-+++..|.. .|++++..++-.+.+    ++++.+.+.....+ ...+    
T Consensus        62 a~~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~----  136 (209)
T PF01135_consen   62 ARMLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGW----  136 (209)
T ss_dssp             HHHHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTT----
T ss_pred             HHHHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhcc----
Confidence            3456778899999999998754 88888888887653 488899887654444    45666543322211 1111    


Q ss_pred             HHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEE
Q 020768          245 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV  284 (321)
Q Consensus       245 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  284 (321)
                           ....+||.++-+.+-++.-...++.|++||+++..
T Consensus       137 -----~~~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~p  171 (209)
T PF01135_consen  137 -----PEEAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAP  171 (209)
T ss_dssp             -----GGG-SEEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred             -----ccCCCcCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence                 11357999999888877778899999999999985

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=97.22  E-value=0.0033  Score=52.58  Aligned_cols=82  Identities=23%  Similarity=0.335  Sum_probs=58.9

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCC---CeEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA---DNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~---~~vi~~~~~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      -|.+|||+|+ +++|+..++-...+|- .||++.+++++++.++...+   ..+.|..+  .+-.+.+.++........+
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d--~~~~~~lvewLkk~~P~lN   80 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVAD--RDSRRELVEWLKKEYPNLN   80 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccc--hhhHHHHHHHHHhhCCchh
Confidence            4789999976 9999999888888997 79999999999998887553   23333322  3333344444443456689


Q ss_pred             EEEEcCCCH
Q 020768          257 VSFDCAGFN  265 (321)
Q Consensus       257 ~vid~~g~~  265 (321)
                      +++++.|-.
T Consensus        81 vliNNAGIq   89 (245)
T COG3967          81 VLINNAGIQ   89 (245)
T ss_pred             eeeeccccc
Confidence            999998854

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.18  E-value=0.01  Score=50.76  Aligned_cols=103  Identities=18%  Similarity=0.230  Sum_probs=69.5

Q ss_pred             HHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHH
Q 020768          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKI  247 (321)
Q Consensus       173 ~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~  247 (321)
                      .++...++++++||-+|+|. |..+..+++..+. ..|++++.+++-.+.+++    .|...+.....+   ....   +
T Consensus        68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd---~~~~---~  140 (212)
T PRK13942         68 MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGD---GTLG---Y  140 (212)
T ss_pred             HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECC---cccC---C
Confidence            34667889999999998754 7777777877653 379999999887766653    454332211111   1000   0


Q ss_pred             HHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEE
Q 020768          248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV  284 (321)
Q Consensus       248 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  284 (321)
                        .....+|+|+-........+.+.+.|++||+++..
T Consensus       141 --~~~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~  175 (212)
T PRK13942        141 --EENAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP  175 (212)
T ss_pred             --CcCCCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence              01357999987655566778889999999998875

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.15  E-value=0.012  Score=56.29  Aligned_cols=104  Identities=23%  Similarity=0.304  Sum_probs=63.8

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCCh--hH-HHHHHHcCCCeE-EecCCCcccHHHHHHHHHHHhCCCc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD--YR-LSVAKELGADNI-VKVSTNLQDIAEEVEKIQKAMGTGI  255 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~--~~-~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~~~~~~~  255 (321)
                      ++.++||+|+ |++|...++.+...|+ ++++++.+.  ++ .+..++++...+ .|.. +..+..+.+..+.+ ..+++
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~-~~~~~~~~~~~~~~-~~g~i  285 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDIT-APDAPARIAEHLAE-RHGGL  285 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCC-CHHHHHHHHHHHHH-hCCCC
Confidence            5789999998 9999999999999999 577776642  22 233345664332 2322 12222333333322 23479


Q ss_pred             cEEEEcCCC----------HHHHHHHHH-----------------HcccCCEEEEEcCC
Q 020768          256 DVSFDCAGF----------NKTMSTALS-----------------ATRAGGKVCLVGMG  287 (321)
Q Consensus       256 d~vid~~g~----------~~~~~~~~~-----------------~l~~~G~~v~~g~~  287 (321)
                      |++|.+.|.          .+.++..++                 .++++|+++++++.
T Consensus       286 d~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~  344 (450)
T PRK08261        286 DIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSI  344 (450)
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECCh
Confidence            999999983          223333332                 45677999999853

>PRK08017 oxidoreductase; Provisional

Probab=97.15  E-value=0.0046  Score=54.08  Aligned_cols=80  Identities=21%  Similarity=0.338  Sum_probs=54.9

Q ss_pred             CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEE-ecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV-KVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi-~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      ++++|+|+ |++|...++.+...|. .|+++.++.++.+.+++.++..+. |.. +..+..+.+..+....+..+|.++.
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~i~~~~~~~~~~ii~   80 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLD-DPESVERAADEVIALTDNRLYGLFN   80 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecC-CHHHHHHHHHHHHHhcCCCCeEEEE
Confidence            57999999 9999999999999998 688888888888877777765432 221 1222222233332222457899998


Q ss_pred             cCCC
Q 020768          261 CAGF  264 (321)
Q Consensus       261 ~~g~  264 (321)
                      +.|.
T Consensus        81 ~ag~   84 (256)
T PRK08017         81 NAGF   84 (256)
T ss_pred             CCCC
Confidence            8773

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=97.14  E-value=0.0067  Score=56.76  Aligned_cols=99  Identities=21%  Similarity=0.277  Sum_probs=70.2

Q ss_pred             HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCC
Q 020768          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~  254 (321)
                      +...+++|++||-+|+| .|.++..+++..|+ .|++++.+++..+.+++......+....  .++.    ++    .+.
T Consensus       161 ~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~--~D~~----~l----~~~  228 (383)
T PRK11705        161 RKLQLKPGMRVLDIGCG-WGGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL--QDYR----DL----NGQ  228 (383)
T ss_pred             HHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE--Cchh----hc----CCC
Confidence            66788999999999984 57778888988888 7999999999999888643221111111  1221    11    356


Q ss_pred             ccEEEEc-----CCC---HHHHHHHHHHcccCCEEEEEc
Q 020768          255 IDVSFDC-----AGF---NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       255 ~d~vid~-----~g~---~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      +|.|+..     +|.   ...++.+.+.|+|+|.+++..
T Consensus       229 fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~  267 (383)
T PRK11705        229 FDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT  267 (383)
T ss_pred             CCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            8998743     343   356788889999999998864

>TIGR00438 rrmJ cell division protein FtsJ

Probab=97.13  E-value=0.012  Score=49.25  Aligned_cols=104  Identities=18%  Similarity=0.279  Sum_probs=62.1

Q ss_pred             cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      ..+++|++||.+|+|.-++......+..+...+++++.++++    ...++. ++..+....+..+.+.+.  ....++|
T Consensus        28 ~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~-~~~~d~~~~~~~~~l~~~--~~~~~~D  100 (188)
T TIGR00438        28 KLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK----PIENVD-FIRGDFTDEEVLNKIRER--VGDDKVD  100 (188)
T ss_pred             cccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc----cCCCce-EEEeeCCChhHHHHHHHH--hCCCCcc
Confidence            567999999999997655544443344344479999998764    112332 222111111222222221  1245799


Q ss_pred             EEEEcC-----CC------------HHHHHHHHHHcccCCEEEEEcCC
Q 020768          257 VSFDCA-----GF------------NKTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       257 ~vid~~-----g~------------~~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      +|+...     |.            ...+..+.++|+++|++++....
T Consensus       101 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~~~  148 (188)
T TIGR00438       101 VVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKVFQ  148 (188)
T ss_pred             EEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEEcc
Confidence            999521     21            35678889999999999986543

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=97.13  E-value=0.02  Score=50.77  Aligned_cols=118  Identities=19%  Similarity=0.342  Sum_probs=77.5

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHH
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      +++++++||++||=+|+|- |-+++..|+..|. +|++++-|++..+.++    +.|...-+..  ...++.    .+  
T Consensus        65 ~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v--~l~d~r----d~--  134 (283)
T COG2230          65 LEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEV--RLQDYR----DF--  134 (283)
T ss_pred             HHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEE--Eecccc----cc--
Confidence            4779999999999999865 6777888999998 7999999988776654    4665411111  001111    11  


Q ss_pred             HhCCCccEEEE-----cCCC---HHHHHHHHHHcccCCEEEEEcCCCCCccc-cchhhhccce
Q 020768          250 AMGTGIDVSFD-----CAGF---NKTMSTALSATRAGGKVCLVGMGHLEMTV-PLTPAAARYL  303 (321)
Q Consensus       250 ~~~~~~d~vid-----~~g~---~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~k~~  303 (321)
                        ...||-|+.     .+|.   ++.|..+.+.|+++|++++........+. ....++.+.|
T Consensus       135 --~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~~~~~~~~~~~~i~~yi  195 (283)
T COG2230         135 --EEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITGPDQEFRRFPDFIDKYI  195 (283)
T ss_pred             --ccccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecCCCcccccchHHHHHhC
Confidence              223777664     3443   35688899999999999988865543222 3333444443

>PRK12828 short chain dehydrogenase; Provisional

Probab=97.08  E-value=0.017  Score=49.69  Aligned_cols=81  Identities=21%  Similarity=0.212  Sum_probs=49.7

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHH-HHH---HcCCCeE-EecCCCcccHHHHHHHHHHHhCCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAK---ELGADNI-VKVSTNLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~-~~~---~~g~~~v-i~~~~~~~~~~~~~~~~~~~~~~~  254 (321)
                      ++.++||+|+ |.+|..+++.+...|+ .|+.++++.++.+ .++   ..+...+ .|.. +..+..+.+.++.+. .++
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~-~~~   82 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLV-DPQAARRAVDEVNRQ-FGR   82 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecC-CHHHHHHHHHHHHHH-hCC
Confidence            3789999998 9999999999888899 5888877665432 222   2233221 1221 122333333333222 347


Q ss_pred             ccEEEEcCCC
Q 020768          255 IDVSFDCAGF  264 (321)
Q Consensus       255 ~d~vid~~g~  264 (321)
                      +|+++.+.|.
T Consensus        83 ~d~vi~~ag~   92 (239)
T PRK12828         83 LDALVNIAGA   92 (239)
T ss_pred             cCEEEECCcc
Confidence            9999998874

>PRK07825 short chain dehydrogenase; Provisional

Probab=97.05  E-value=0.023  Score=50.34  Aligned_cols=81  Identities=28%  Similarity=0.294  Sum_probs=52.7

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCeEEecCC-CcccHHHHHHHHHHHhCCCccEE
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~vi~~~~-~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      +.++||+|+ |++|...++.+...|+ .|+++++++++.+.+ ++++....+..+- +.+++.+.+..+.+. .+++|++
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~l   82 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEAD-LGPIDVL   82 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHH-cCCCCEE
Confidence            578999999 9999999988888899 577777887776543 4454222222221 223333334444332 3579999


Q ss_pred             EEcCCC
Q 020768          259 FDCAGF  264 (321)
Q Consensus       259 id~~g~  264 (321)
                      |.+.|.
T Consensus        83 i~~ag~   88 (273)
T PRK07825         83 VNNAGV   88 (273)
T ss_pred             EECCCc
Confidence            999874

>PRK07326 short chain dehydrogenase; Provisional

Probab=97.04  E-value=0.017  Score=49.83  Aligned_cols=82  Identities=27%  Similarity=0.284  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCC-C--eEEecC-CCcccHHHHHHHHHHHhCCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGA-D--NIVKVS-TNLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~-~--~vi~~~-~~~~~~~~~~~~~~~~~~~~  254 (321)
                      .+.+++|+|+ |.+|...++.+...|+ .|+++++++++...+ +++.. .  ..+..+ .+..++.+.+.++.+. .++
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   82 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAA-FGG   82 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHH-cCC
Confidence            4688999998 9999999998888898 588888777665433 33421 1  122212 1222333334343322 347


Q ss_pred             ccEEEEcCCC
Q 020768          255 IDVSFDCAGF  264 (321)
Q Consensus       255 ~d~vid~~g~  264 (321)
                      +|++|.+.|.
T Consensus        83 ~d~vi~~ag~   92 (237)
T PRK07326         83 LDVLIANAGV   92 (237)
T ss_pred             CCEEEECCCC
Confidence            9999998764

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=97.04  E-value=0.01  Score=57.76  Aligned_cols=46  Identities=20%  Similarity=0.212  Sum_probs=38.2

Q ss_pred             HHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH
Q 020768          175 RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV  221 (321)
Q Consensus       175 ~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~  221 (321)
                      +..+.+.|+++||+|+ |.+|..+++.+...|+ .|+++.++.++.+.
T Consensus        73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~  119 (576)
T PLN03209         73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAES  119 (576)
T ss_pred             cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHH
Confidence            4567789999999999 9999999999988998 57777787776543

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=97.02  E-value=0.013  Score=48.50  Aligned_cols=93  Identities=18%  Similarity=0.254  Sum_probs=63.5

Q ss_pred             EEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCC
Q 020768          185 VLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  263 (321)
Q Consensus       185 vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  263 (321)
                      |+|+|+ |.+|...++.+...|. .|.++.+++++.+.  ..+++ ++..+-  .+. +.+.+.    -.++|.||.+.|
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~-~~~~d~--~d~-~~~~~a----l~~~d~vi~~~~   69 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVE-IIQGDL--FDP-DSVKAA----LKGADAVIHAAG   69 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEE-EEESCT--TCH-HHHHHH----HTTSSEEEECCH
T ss_pred             eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccc-cceeee--hhh-hhhhhh----hhhcchhhhhhh
Confidence            789999 9999999999999997 68888888887766  33333 333222  222 223222    147999999998


Q ss_pred             C----HHHHHHHHHHcccCC--EEEEEcCCC
Q 020768          264 F----NKTMSTALSATRAGG--KVCLVGMGH  288 (321)
Q Consensus       264 ~----~~~~~~~~~~l~~~G--~~v~~g~~~  288 (321)
                      .    ......+++.++..|  +++.++..+
T Consensus        70 ~~~~~~~~~~~~~~a~~~~~~~~~v~~s~~~  100 (183)
T PF13460_consen   70 PPPKDVDAAKNIIEAAKKAGVKRVVYLSSAG  100 (183)
T ss_dssp             STTTHHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred             hhcccccccccccccccccccccceeeeccc
Confidence            4    344566677765554  788777543

...

>PRK07814 short chain dehydrogenase; Provisional

Probab=96.99  E-value=0.027  Score=49.61  Aligned_cols=82  Identities=17%  Similarity=0.219  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-H---cCCC-eEEecCCCc-ccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-E---LGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~---~g~~-~vi~~~~~~-~~~~~~~~~~~~~~~~  253 (321)
                      .+.++||+|+ |++|...++.+...|+ .|++++++.++.+.+. .   .+.. ..+..+-.+ ....+.+.++.+. .+
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   86 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEA-FG   86 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence            4789999998 9999999999999999 6888888776654332 2   2322 222222222 2222233333222 35


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|.++|.
T Consensus        87 ~id~vi~~Ag~   97 (263)
T PRK07814         87 RLDIVVNNVGG   97 (263)
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.99  E-value=0.025  Score=50.28  Aligned_cols=106  Identities=20%  Similarity=0.268  Sum_probs=63.7

Q ss_pred             CCCEEEEEcC-C--hhHHHHHHHHHHcCCCeEEEEeCChhHH---H-HHHHcCCCeEEecCC-CcccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-G--PIGLVTMLGARAFGAPRIVIVDVDDYRL---S-VAKELGADNIVKVST-NLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g--~vG~~a~qla~~~g~~~vv~v~~~~~~~---~-~~~~~g~~~vi~~~~-~~~~~~~~~~~~~~~~~  252 (321)
                      .++++||+|+ +  ++|...++.+...|+ +|+.+.++++..   + ..+++|....+..+- +.++..+.+.++.+. .
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~-~   83 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKK-W   83 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHH-h
Confidence            4688999998 4  899999999999999 566666654322   2 223445433222221 222333334443332 3


Q ss_pred             CCccEEEEcCCCH--------------H---------------HHHHHHHHcccCCEEEEEcCCC
Q 020768          253 TGIDVSFDCAGFN--------------K---------------TMSTALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       253 ~~~d~vid~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~~~  288 (321)
                      +.+|++|++.|..              +               ..+.++..+..+|+++.++...
T Consensus        84 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~  148 (271)
T PRK06505         84 GKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGG  148 (271)
T ss_pred             CCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCC
Confidence            5799999998831              0               1233445566679999887543

>PRK08339 short chain dehydrogenase; Provisional

Probab=96.99  E-value=0.023  Score=50.22  Aligned_cols=105  Identities=14%  Similarity=0.175  Sum_probs=65.5

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-Hc----CCC-eEEecCC-CcccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-EL----GAD-NIVKVST-NLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~----g~~-~vi~~~~-~~~~~~~~~~~~~~~~~  252 (321)
                      .|+++||+|+ +++|...++.+...|+ +|+.++++.++.+.+. ++    +.. ..+..+- +..+..+.+.++.+  .
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~--~   83 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKN--I   83 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHh--h
Confidence            4788999998 9999999999999999 5777888876654332 22    322 1222221 22233333444322  3


Q ss_pred             CCccEEEEcCCCHH-------------------------HHHHHHHHccc--CCEEEEEcCCC
Q 020768          253 TGIDVSFDCAGFNK-------------------------TMSTALSATRA--GGKVCLVGMGH  288 (321)
Q Consensus       253 ~~~d~vid~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~~  288 (321)
                      +++|+++.+.|...                         ..+.++..+..  .|+++.++...
T Consensus        84 g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~  146 (263)
T PRK08339         84 GEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVA  146 (263)
T ss_pred             CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCcc
Confidence            56999999987421                         13445555533  48999998653

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.98  E-value=0.0058  Score=50.79  Aligned_cols=88  Identities=22%  Similarity=0.236  Sum_probs=61.4

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      .|.+|.|+|.|.+|...++.++.+|+ +|++.+++.+..+.....+...        .++.+.+.        ..|+|+.
T Consensus        35 ~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~~--------~~l~ell~--------~aDiv~~   97 (178)
T PF02826_consen   35 RGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVEY--------VSLDELLA--------QADIVSL   97 (178)
T ss_dssp             TTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEEE--------SSHHHHHH--------H-SEEEE
T ss_pred             CCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhccccccee--------eehhhhcc--------hhhhhhh
Confidence            58899999999999999999999999 7999988887766455555421        12222222        2688888


Q ss_pred             cCCCHH----H-HHHHHHHcccCCEEEEEc
Q 020768          261 CAGFNK----T-MSTALSATRAGGKVCLVG  285 (321)
Q Consensus       261 ~~g~~~----~-~~~~~~~l~~~G~~v~~g  285 (321)
                      +.....    . =...+..++++..++.++
T Consensus        98 ~~plt~~T~~li~~~~l~~mk~ga~lvN~a  127 (178)
T PF02826_consen   98 HLPLTPETRGLINAEFLAKMKPGAVLVNVA  127 (178)
T ss_dssp             -SSSSTTTTTSBSHHHHHTSTTTEEEEESS
T ss_pred             hhccccccceeeeeeeeeccccceEEEecc
Confidence            777321    1 236678889888888887

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK07806 short chain dehydrogenase; Provisional

Probab=96.98  E-value=0.03  Score=48.63  Aligned_cols=104  Identities=22%  Similarity=0.231  Sum_probs=61.4

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCCh-hHHH-H---HHHcCCC-eEEecCC-CcccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD-YRLS-V---AKELGAD-NIVKVST-NLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~-~~~~-~---~~~~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~  252 (321)
                      .+.++||+|+ |++|...+..+...|. .|+++.++. ++.+ .   ++..+.. ..+..+- +.++..+.+.++.+ ..
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~   82 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTARE-EF   82 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH-hC
Confidence            4678999998 9999999998888998 566665543 2222 2   2222322 1222121 12223333333322 13


Q ss_pred             CCccEEEEcCCCH-------------------HHHHHHHHHcccCCEEEEEcC
Q 020768          253 TGIDVSFDCAGFN-------------------KTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       253 ~~~d~vid~~g~~-------------------~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      +++|+++.+.|..                   ..++.+...+..+|+++.++.
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS  135 (248)
T PRK07806         83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS  135 (248)
T ss_pred             CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence            4789999887642                   234555666666789998875

>PRK07109 short chain dehydrogenase; Provisional

Probab=96.96  E-value=0.023  Score=52.13  Aligned_cols=107  Identities=20%  Similarity=0.253  Sum_probs=65.9

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCeE-EecCC-CcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNI-VKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~v-i~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      .+.+++|+|+ |++|..+++.+...|+ .|+.+++++++.+.+    ++.|.... +..+- +..+..+.+..+.+. .+
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~-~g   84 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEE-LG   84 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH-CC
Confidence            4678999998 9999999999999999 577777877665432    23454322 22121 122333333333222 35


Q ss_pred             CccEEEEcCCCHH-------------------------HHHHHHHHccc--CCEEEEEcCCCC
Q 020768          254 GIDVSFDCAGFNK-------------------------TMSTALSATRA--GGKVCLVGMGHL  289 (321)
Q Consensus       254 ~~d~vid~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~~~  289 (321)
                      ++|++|++.|...                         ..+.++..+.+  .|+++.+++...
T Consensus        85 ~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~  147 (334)
T PRK07109         85 PIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALA  147 (334)
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhh
Confidence            7999999988421                         12234555544  589999986543

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=96.94  E-value=0.018  Score=49.34  Aligned_cols=104  Identities=20%  Similarity=0.215  Sum_probs=68.7

Q ss_pred             HHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHH
Q 020768          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKI  247 (321)
Q Consensus       173 ~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~  247 (321)
                      .++...++++++||=+|+|. |..++.+++..+. ..|++++.+++..+.++    ++|.+.+.....   +..+...  
T Consensus        69 ~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~---d~~~~~~--  142 (215)
T TIGR00080        69 MTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVG---DGTQGWE--  142 (215)
T ss_pred             HHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEEC---CcccCCc--
Confidence            34667789999999998754 6666777777543 25999999988776654    455543322211   1111100  


Q ss_pred             HHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEc
Q 020768          248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       248 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                         ....||+|+-..........+.+.|+++|+++..-
T Consensus       143 ---~~~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~~  177 (215)
T TIGR00080       143 ---PLAPYDRIYVTAAGPKIPEALIDQLKEGGILVMPV  177 (215)
T ss_pred             ---ccCCCCEEEEcCCcccccHHHHHhcCcCcEEEEEE
Confidence               12479998866555566778889999999988753

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PRK06180 short chain dehydrogenase; Provisional

Probab=96.92  E-value=0.028  Score=49.94  Aligned_cols=82  Identities=22%  Similarity=0.192  Sum_probs=52.5

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCe--EEecCCC-cccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN--IVKVSTN-LQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~--vi~~~~~-~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .++++||+|+ |++|...++.+...|. .|++++++.++.+.+.+.....  .+..+-. .....+.+....+. .+++|
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~-~~~~d   80 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEAT-FGPID   80 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHH-hCCCC
Confidence            4678999998 9999999999888998 6888888887766555432221  1221111 12223333333221 34699


Q ss_pred             EEEEcCCC
Q 020768          257 VSFDCAGF  264 (321)
Q Consensus       257 ~vid~~g~  264 (321)
                      +++.+.|.
T Consensus        81 ~vv~~ag~   88 (277)
T PRK06180         81 VLVNNAGY   88 (277)
T ss_pred             EEEECCCc
Confidence            99999885

>PRK08265 short chain dehydrogenase; Provisional

Probab=96.92  E-value=0.028  Score=49.50  Aligned_cols=105  Identities=22%  Similarity=0.237  Sum_probs=65.7

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHH-HHHHcCCCe-EEecCC-CcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~-~~~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .+.+++|+|+ +++|...+..+...|+ .|+.++++.++.+ ..++++... .+..+- +..+..+.+.++.+. .+.+|
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~g~id   82 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVAR-FGRVD   82 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHH-hCCCC
Confidence            4679999998 9999999999999999 6888888776544 344555321 222211 222333334443332 35699


Q ss_pred             EEEEcCCCH---------H---------------HHHHHHHHc-ccCCEEEEEcCC
Q 020768          257 VSFDCAGFN---------K---------------TMSTALSAT-RAGGKVCLVGMG  287 (321)
Q Consensus       257 ~vid~~g~~---------~---------------~~~~~~~~l-~~~G~~v~~g~~  287 (321)
                      ++|.+.|..         +               ..+.+...+ +.+|+++.++..
T Consensus        83 ~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~  138 (261)
T PRK08265         83 ILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSI  138 (261)
T ss_pred             EEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECch
Confidence            999998741         0               122333444 567999999854

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=96.91  E-value=0.0075  Score=45.58  Aligned_cols=93  Identities=28%  Similarity=0.378  Sum_probs=62.7

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHH-cCCCeEEEEeCChhHHHHHHH-c---CC-CeEEecCCCcccHHHHHHHHHHHhCCC
Q 020768          181 PETNVLIMGAGPIGLVTMLGARA-FGAPRIVIVDVDDYRLSVAKE-L---GA-DNIVKVSTNLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~-~g~~~vv~v~~~~~~~~~~~~-~---g~-~~vi~~~~~~~~~~~~~~~~~~~~~~~  254 (321)
                      ||.+||-+|+|. |..++.+++. .+. ++++++.+++..+.+++ .   +. +.+....   .++ ...    .....+
T Consensus         1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~---~d~-~~~----~~~~~~   70 (112)
T PF12847_consen    1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQ---GDA-EFD----PDFLEP   70 (112)
T ss_dssp             TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEE---SCC-HGG----TTTSSC
T ss_pred             CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEE---Ccc-ccC----cccCCC
Confidence            688999999865 7777788885 565 79999999998888764 2   22 2222211   122 100    112457


Q ss_pred             ccEEEEcC-CC---H------HHHHHHHHHcccCCEEEE
Q 020768          255 IDVSFDCA-GF---N------KTMSTALSATRAGGKVCL  283 (321)
Q Consensus       255 ~d~vid~~-g~---~------~~~~~~~~~l~~~G~~v~  283 (321)
                      +|+|+... ..   .      ..++.+.+.|+++|++++
T Consensus        71 ~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi  109 (112)
T PF12847_consen   71 FDLVICSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVI  109 (112)
T ss_dssp             EEEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             CCEEEECCCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence            99999876 21   1      237889999999999876

...

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=96.91  E-value=0.0026  Score=56.58  Aligned_cols=100  Identities=21%  Similarity=0.379  Sum_probs=61.5

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHH
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      ++++++++|++||-+|+| -|-+++.+|+..|+ .|.+++.+++..++++    +.|....+.+..  .|+.    ++  
T Consensus        55 ~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~--~D~~----~~--  124 (273)
T PF02353_consen   55 CEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRL--QDYR----DL--  124 (273)
T ss_dssp             HTTTT--TT-EEEEES-T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEE--S-GG----G---
T ss_pred             HHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE--eecc----cc--
Confidence            467899999999999987 46777788898899 7999999988877764    456432111111  1221    11  


Q ss_pred             HhCCCccEEEE-----cCCC---HHHHHHHHHHcccCCEEEEEc
Q 020768          250 AMGTGIDVSFD-----CAGF---NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       250 ~~~~~~d~vid-----~~g~---~~~~~~~~~~l~~~G~~v~~g  285 (321)
                        ...+|.|+.     .+|.   +..++.+.+.|+|+|++++-.
T Consensus       125 --~~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq~  166 (273)
T PF02353_consen  125 --PGKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQT  166 (273)
T ss_dssp             ----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEEE
T ss_pred             --CCCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEEe
Confidence              237898875     3442   246889999999999997544

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.91  E-value=0.016  Score=49.29  Aligned_cols=103  Identities=18%  Similarity=0.205  Sum_probs=67.9

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHHH----HcCCCe-EEecCCCcccHHHHHHHH
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAK----ELGADN-IVKVSTNLQDIAEEVEKI  247 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~~----~~g~~~-vi~~~~~~~~~~~~~~~~  247 (321)
                      ++...++++++||=+|+|. |..+..+++..+ ...|++++.+++-.+.++    +.+... +.....   +..+.+.  
T Consensus        65 ~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~---d~~~~~~--  138 (205)
T PRK13944         65 CELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHG---DGKRGLE--  138 (205)
T ss_pred             HHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEC---CcccCCc--
Confidence            4667788999999998854 777777777764 237999999988666554    345432 211111   1111110  


Q ss_pred             HHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEc
Q 020768          248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       248 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                         ....+|.|+-+.......+.+.+.|++||+++..-
T Consensus       139 ---~~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~~  173 (205)
T PRK13944        139 ---KHAPFDAIIVTAAASTIPSALVRQLKDGGVLVIPV  173 (205)
T ss_pred             ---cCCCccEEEEccCcchhhHHHHHhcCcCcEEEEEE
Confidence               13579999977665566678889999999997743

>PRK12939 short chain dehydrogenase; Provisional

Probab=96.91  E-value=0.03  Score=48.58  Aligned_cols=82  Identities=15%  Similarity=0.126  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-H---HcCCC-eEEecCCCc-ccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-K---ELGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~---~~g~~-~vi~~~~~~-~~~~~~~~~~~~~~~~  253 (321)
                      .+.+++|+|+ |++|...+..+...|+ .++++++++++.+.. +   ..+.. .++..+-.+ .+..+.+.++.+ ..+
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~   83 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAA-ALG   83 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH-HcC
Confidence            4689999998 9999999999988998 577777776654432 2   22322 122222221 222222222222 135


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|.+.|.
T Consensus        84 ~id~vi~~ag~   94 (250)
T PRK12939         84 GLDGLVNNAGI   94 (250)
T ss_pred             CCCEEEECCCC
Confidence            79999999985

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.90  E-value=0.04  Score=48.51  Aligned_cols=82  Identities=17%  Similarity=0.226  Sum_probs=48.2

Q ss_pred             CCCEEEEEcC-C--hhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCeEEecCC-CcccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-G--PIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNIVKVST-NLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g--~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~vi~~~~-~~~~~~~~~~~~~~~~~  252 (321)
                      .|++++|+|+ +  ++|...++.+...|+ .|+.+.++++..+.+    ++.|....+..+- +..+..+.+.++.+. .
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~-~   84 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEK-W   84 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHH-c
Confidence            4688999998 4  799999888888899 566666653222222    2334333222221 223333334443332 3


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      +.+|+++++.|.
T Consensus        85 g~iDilVnnag~   96 (260)
T PRK06603         85 GSFDFLLHGMAF   96 (260)
T ss_pred             CCccEEEEcccc
Confidence            569999998873

>PRK08267 short chain dehydrogenase; Provisional

Probab=96.90  E-value=0.022  Score=50.01  Aligned_cols=81  Identities=27%  Similarity=0.353  Sum_probs=51.1

Q ss_pred             CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-HcC-CC-eEEecCC-CcccHHHHHHHHHHHhCCCccE
Q 020768          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELG-AD-NIVKVST-NLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~g-~~-~vi~~~~-~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      +++||+|+ |++|...++.+...|+ .|++++++.++.+.+. .++ .. .++..+- +..+..+.+..+.....+++|+
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~   80 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV   80 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence            47999998 9999999998888998 6888888877665443 333 11 1222111 1223333333332222467999


Q ss_pred             EEEcCCC
Q 020768          258 SFDCAGF  264 (321)
Q Consensus       258 vid~~g~  264 (321)
                      ++.+.|.
T Consensus        81 vi~~ag~   87 (260)
T PRK08267         81 LFNNAGI   87 (260)
T ss_pred             EEECCCC
Confidence            9999885

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=96.89  E-value=0.016  Score=53.87  Aligned_cols=100  Identities=16%  Similarity=0.208  Sum_probs=66.3

Q ss_pred             CEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcC---CCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG---ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g---~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      .+|||+|+|.+|..+++.+...+...|.+.+++.++.+.+....   ... +.++-.  + .+.+.++.    .++|+||
T Consensus         2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~-~~vD~~--d-~~al~~li----~~~d~VI   73 (389)
T COG1748           2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEA-LQVDAA--D-VDALVALI----KDFDLVI   73 (389)
T ss_pred             CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhcccccee-EEeccc--C-hHHHHHHH----hcCCEEE
Confidence            57999999999999999988888557999999988888876654   222 222211  1 22233332    3459999


Q ss_pred             EcCCCHHHHHHHHHHcccCCEEEEEcCCCCC
Q 020768          260 DCAGFNKTMSTALSATRAGGKVCLVGMGHLE  290 (321)
Q Consensus       260 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~  290 (321)
                      ++.+........-.+++.+=.++........
T Consensus        74 n~~p~~~~~~i~ka~i~~gv~yvDts~~~~~  104 (389)
T COG1748          74 NAAPPFVDLTILKACIKTGVDYVDTSYYEEP  104 (389)
T ss_pred             EeCCchhhHHHHHHHHHhCCCEEEcccCCch
Confidence            9999765554444556666667766655433

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.88  E-value=0.04  Score=49.04  Aligned_cols=106  Identities=19%  Similarity=0.253  Sum_probs=65.8

Q ss_pred             CCCEEEEEcC---ChhHHHHHHHHHHcCCCeEEEEeCChh---HHH-HHHHcCCCeEEecCC-CcccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVDDY---RLS-VAKELGADNIVKVST-NLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga---g~vG~~a~qla~~~g~~~vv~v~~~~~---~~~-~~~~~g~~~vi~~~~-~~~~~~~~~~~~~~~~~  252 (321)
                      .++++||+|+   +++|..+++.+...|+ .|+.++++.+   +.+ ..++++....+..+- +.++..+.+.++.+. .
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~-~   81 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKD-L   81 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHH-c
Confidence            4789999987   4899999998888999 5777766642   222 234455433332222 122333334443332 3


Q ss_pred             CCccEEEEcCCCH--------------H---------------HHHHHHHHcccCCEEEEEcCCC
Q 020768          253 TGIDVSFDCAGFN--------------K---------------TMSTALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       253 ~~~d~vid~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~~~  288 (321)
                      +.+|++|++.|..              +               ..+.++..+..+|+++.++...
T Consensus        82 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~  146 (274)
T PRK08415         82 GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLG  146 (274)
T ss_pred             CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCC
Confidence            5799999999841              0               2345666777789999987543

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.87  E-value=0.039  Score=48.55  Aligned_cols=106  Identities=17%  Similarity=0.222  Sum_probs=64.3

Q ss_pred             CCCEEEEEcCC---hhHHHHHHHHHHcCCCeEEEEeCChhHH----HHHHHcCCCeEEecCC-CcccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGAG---PIGLVTMLGARAFGAPRIVIVDVDDYRL----SVAKELGADNIVKVST-NLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Gag---~vG~~a~qla~~~g~~~vv~v~~~~~~~----~~~~~~g~~~vi~~~~-~~~~~~~~~~~~~~~~~  252 (321)
                      .|+++||+|++   ++|..+++.+...|+ .|+.++++.+..    +..++++....+..+- +.++..+.+.++.+. .
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~   86 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEE-W   86 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHH-c
Confidence            47899999873   899999998888999 566666664332    2233444323333222 222333333443332 3


Q ss_pred             CCccEEEEcCCCH--------------H---------------HHHHHHHHcccCCEEEEEcCCC
Q 020768          253 TGIDVSFDCAGFN--------------K---------------TMSTALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       253 ~~~d~vid~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~~~  288 (321)
                      +.+|+++.+.|-.              +               ..+.++..++.+|+++.++...
T Consensus        87 g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~  151 (258)
T PRK07533         87 GRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYG  151 (258)
T ss_pred             CCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccc
Confidence            5799999998731              1               1344566677789998887543

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=96.86  E-value=0.015  Score=52.77  Aligned_cols=92  Identities=25%  Similarity=0.294  Sum_probs=63.4

Q ss_pred             CEEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 020768          183 TNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  261 (321)
                      .+|.|+|+|.+|...+..++..|. ..|++.++++++.+.+++.|......     .+..    +.    -...|+||.|
T Consensus         7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~-----~~~~----~~----~~~aDvViia   73 (307)
T PRK07502          7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT-----TSAA----EA----VKGADLVILC   73 (307)
T ss_pred             cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec-----CCHH----HH----hcCCCEEEEC
Confidence            579999999999999998888875 36888899998888888887532111     1111    11    1357999999


Q ss_pred             CCCHHH---HHHHHHHcccCCEEEEEcCC
Q 020768          262 AGFNKT---MSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       262 ~g~~~~---~~~~~~~l~~~G~~v~~g~~  287 (321)
                      +.....   +..+...++++..++.+|..
T Consensus        74 vp~~~~~~v~~~l~~~l~~~~iv~dvgs~  102 (307)
T PRK07502         74 VPVGASGAVAAEIAPHLKPGAIVTDVGSV  102 (307)
T ss_pred             CCHHHHHHHHHHHHhhCCCCCEEEeCccc
Confidence            986432   33344556777777776653

>PRK06139 short chain dehydrogenase; Provisional

Probab=96.84  E-value=0.014  Score=53.59  Aligned_cols=82  Identities=27%  Similarity=0.375  Sum_probs=53.5

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCe-EEecCC-CcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      .++++||+|+ +++|...++.+...|+ .|+.+++++++.+.+    ++.|.+. ++..+- +.++..+.+.++.+ ..+
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~-~~g   83 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAAS-FGG   83 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH-hcC
Confidence            4689999999 9999999999999999 577888887776433    3445443 222111 12233333333322 235


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|++.|.
T Consensus        84 ~iD~lVnnAG~   94 (330)
T PRK06139         84 RIDVWVNNVGV   94 (330)
T ss_pred             CCCEEEECCCc
Confidence            79999999984

>PRK14967 putative methyltransferase; Provisional

Probab=96.83  E-value=0.0069  Score=52.26  Aligned_cols=100  Identities=26%  Similarity=0.318  Sum_probs=66.6

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHH
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      +....++++++||-.|+|. |..++.+++. +...+++++.+++..+.+++    .+....+. .   .++.+.+     
T Consensus        29 l~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~-~---~d~~~~~-----   97 (223)
T PRK14967         29 LAAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVR-R---GDWARAV-----   97 (223)
T ss_pred             HHhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEE-E---Cchhhhc-----
Confidence            4455678899999999977 8888888875 55579999999988776553    34322111 1   2222211     


Q ss_pred             HhCCCccEEEEcCC---C------------------------HHHHHHHHHHcccCCEEEEEc
Q 020768          250 AMGTGIDVSFDCAG---F------------------------NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       250 ~~~~~~d~vid~~g---~------------------------~~~~~~~~~~l~~~G~~v~~g  285 (321)
                       ....+|+|+...+   .                        ...+..+.+.|+++|+++++-
T Consensus        98 -~~~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~  159 (223)
T PRK14967         98 -EFRPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQ  159 (223)
T ss_pred             -cCCCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence             1357999997521   0                        124566789999999999864

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=96.81  E-value=0.00031  Score=54.75  Aligned_cols=50  Identities=30%  Similarity=0.489  Sum_probs=35.6

Q ss_pred             cCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCC--CHHHHHHHHHHcccCCEEEEEcC
Q 020768          225 LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG--FNKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       225 ~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g--~~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      ||++++++|+.  .++         ....++|+|||++|  .+..+..++++| ++|+++.++.
T Consensus         1 LGAd~vidy~~--~~~---------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~   52 (127)
T PF13602_consen    1 LGADEVIDYRD--TDF---------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG   52 (127)
T ss_dssp             CT-SEEEETTC--SHH---------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S
T ss_pred             CCcCEEecCCC--ccc---------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC
Confidence            68999999863  333         23678999999999  655557777888 9999999984

>PRK05872 short chain dehydrogenase; Provisional

Probab=96.80  E-value=0.026  Score=50.83  Aligned_cols=81  Identities=31%  Similarity=0.451  Sum_probs=54.0

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH-HHHcCCC-eE----EecCCCcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGAD-NI----VKVSTNLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~-~~~~g~~-~v----i~~~~~~~~~~~~~~~~~~~~~~  253 (321)
                      .|+++||+|+ |++|..+++.+...|+ .|++++++.++.+. .++++.. .+    .|.. +..+..+.+.++.+. .+
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~-d~~~v~~~~~~~~~~-~g   84 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVT-DLAAMQAAAEEAVER-FG   84 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCC-CHHHHHHHHHHHHHH-cC
Confidence            4789999998 9999999999999999 68888888776554 3455521 12    2222 222333333443332 35


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|++.|.
T Consensus        85 ~id~vI~nAG~   95 (296)
T PRK05872         85 GIDVVVANAGI   95 (296)
T ss_pred             CCCEEEECCCc
Confidence            79999999985

>PRK08618 ornithine cyclodeaminase; Validated

Probab=96.79  E-value=0.05  Score=49.78  Aligned_cols=107  Identities=11%  Similarity=0.105  Sum_probs=71.7

Q ss_pred             HHcCCCCCCEEEEEcCChhHHHHHHHH-HHcCCCeEEEEeCChhHHHH-HHHc----CCCeEEecCCCcccHHHHHHHHH
Q 020768          175 RRANIGPETNVLIMGAGPIGLVTMLGA-RAFGAPRIVIVDVDDYRLSV-AKEL----GADNIVKVSTNLQDIAEEVEKIQ  248 (321)
Q Consensus       175 ~~~~~~~g~~vlI~Gag~vG~~a~qla-~~~g~~~vv~v~~~~~~~~~-~~~~----g~~~vi~~~~~~~~~~~~~~~~~  248 (321)
                      +...-+...+++|+|+|..+...+..+ ...+++.|.+.++++++.+. ++++    +... ..++    +..+.+    
T Consensus       120 ~~la~~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~-~~~~----~~~~~~----  190 (325)
T PRK08618        120 KYLAREDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEI-YVVN----SADEAI----  190 (325)
T ss_pred             HHhcCCCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcE-EEeC----CHHHHH----
Confidence            444445678899999999998776544 46788889999998877653 3333    4332 2221    222222    


Q ss_pred             HHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-Cccccch
Q 020768          249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLT  296 (321)
Q Consensus       249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~  296 (321)
                          ...|+|+.|+++...+- . ..+++|-+++.+|...+ ..++|..
T Consensus       191 ----~~aDiVi~aT~s~~p~i-~-~~l~~G~hV~~iGs~~p~~~E~~~~  233 (325)
T PRK08618        191 ----EEADIIVTVTNAKTPVF-S-EKLKKGVHINAVGSFMPDMQELPSE  233 (325)
T ss_pred             ----hcCCEEEEccCCCCcch-H-HhcCCCcEEEecCCCCcccccCCHH
Confidence                35899999999864433 3 89999999999997644 4566653

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.79  E-value=0.032  Score=45.29  Aligned_cols=102  Identities=17%  Similarity=0.268  Sum_probs=68.0

Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccE
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      .+-.|.+++|.|=|-+|.-.++.++.+|+ +|++++.++-+.-.+..-|... ..           +.+.    -...|+
T Consensus        19 ~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~v-~~-----------~~~a----~~~adi   81 (162)
T PF00670_consen   19 LMLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFEV-MT-----------LEEA----LRDADI   81 (162)
T ss_dssp             S--TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-EE-E------------HHHH----TTT-SE
T ss_pred             eeeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcEe-cC-----------HHHH----HhhCCE
Confidence            45689999999999999999999999999 7999999998877777767642 11           1121    245799


Q ss_pred             EEEcCCCHHHH-HHHHHHcccCCEEEEEcCCCCCccccchhh
Q 020768          258 SFDCAGFNKTM-STALSATRAGGKVCLVGMGHLEMTVPLTPA  298 (321)
Q Consensus       258 vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~  298 (321)
                      +|.++|+...+ ..-+..|+++.-+..+|...  .++++..+
T Consensus        82 ~vtaTG~~~vi~~e~~~~mkdgail~n~Gh~d--~Eid~~~L  121 (162)
T PF00670_consen   82 FVTATGNKDVITGEHFRQMKDGAILANAGHFD--VEIDVDAL  121 (162)
T ss_dssp             EEE-SSSSSSB-HHHHHHS-TTEEEEESSSST--TSBTHHHH
T ss_pred             EEECCCCccccCHHHHHHhcCCeEEeccCcCc--eeEeeccc
Confidence            99999986543 47788899888888888544  45555443

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK06500 short chain dehydrogenase; Provisional

Probab=96.77  E-value=0.048  Score=47.32  Aligned_cols=82  Identities=26%  Similarity=0.324  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH-HHHcCCCe-EEecCC-CcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~-~~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      ++.+++|+|+ |++|...++.+...|+ .++.++++.++.+. .++++... .+..+- +..+..+.+..+.+ ..+++|
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id   82 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAE-AFGRLD   82 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHH-HhCCCC
Confidence            4679999998 9999999999999999 67888777665543 34555432 122111 11222222333322 235799


Q ss_pred             EEEEcCCC
Q 020768          257 VSFDCAGF  264 (321)
Q Consensus       257 ~vid~~g~  264 (321)
                      ++|.+.|.
T Consensus        83 ~vi~~ag~   90 (249)
T PRK06500         83 AVFINAGV   90 (249)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.76  E-value=0.058  Score=46.81  Aligned_cols=82  Identities=21%  Similarity=0.206  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcC--CC-eEEecCC-CcccHHHHHHHHHHHhCCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELG--AD-NIVKVST-NLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g--~~-~vi~~~~-~~~~~~~~~~~~~~~~~~~  254 (321)
                      .+.++||+|+ |++|...++.+...|. .|++++++.++.+.+ ..+.  .. ..+..+- +..++.+.+.+.... ...
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   81 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALER-FGS   81 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-hCC
Confidence            4678999998 9999999998888899 588888887665543 3332  11 1122111 122333333333222 357


Q ss_pred             ccEEEEcCCC
Q 020768          255 IDVSFDCAGF  264 (321)
Q Consensus       255 ~d~vid~~g~  264 (321)
                      +|++|.+.|.
T Consensus        82 ~d~vi~~ag~   91 (251)
T PRK07231         82 VDILVNNAGT   91 (251)
T ss_pred             CCEEEECCCC
Confidence            9999999875

>PRK06057 short chain dehydrogenase; Provisional

Probab=96.75  E-value=0.019  Score=50.30  Aligned_cols=81  Identities=25%  Similarity=0.338  Sum_probs=52.6

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCeEEecCC-CcccHHHHHHHHHHHhCCCccE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~vi~~~~-~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      .|++++|+|+ |++|...++.+...|+ .|+++++++.+.+.. .+++.. .+..+- +..+..+.+.++.+. .+++|+
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~-~~~id~   82 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGL-FVPTDVTDEDAVNALFDTAAET-YGSVDI   82 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCc-EEEeeCCCHHHHHHHHHHHHHH-cCCCCE
Confidence            4789999999 9999999999999998 677777777665433 445443 222221 122333333333222 357999


Q ss_pred             EEEcCCC
Q 020768          258 SFDCAGF  264 (321)
Q Consensus       258 vid~~g~  264 (321)
                      ++.+.|.
T Consensus        83 vi~~ag~   89 (255)
T PRK06057         83 AFNNAGI   89 (255)
T ss_pred             EEECCCc
Confidence            9998874

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.75  E-value=0.044  Score=48.02  Aligned_cols=107  Identities=14%  Similarity=0.173  Sum_probs=65.0

Q ss_pred             CCCEEEEEcCC---hhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCe--EEecCC-CcccHHHHHHHHHHHhCCC
Q 020768          181 PETNVLIMGAG---PIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN--IVKVST-NLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       181 ~g~~vlI~Gag---~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~--vi~~~~-~~~~~~~~~~~~~~~~~~~  254 (321)
                      .|++++|+|++   ++|...++.+...|+ +|+.+.++++..+.++++....  .+..+- +.++..+.+.++.+. .+.
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~g~   83 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKER-VGK   83 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHH-hCC
Confidence            57899999874   899999999988999 5777766644444444443221  222111 122333333443332 356


Q ss_pred             ccEEEEcCCCHH-----------------------------HHHHHHHHcccCCEEEEEcCCCC
Q 020768          255 IDVSFDCAGFNK-----------------------------TMSTALSATRAGGKVCLVGMGHL  289 (321)
Q Consensus       255 ~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~~  289 (321)
                      +|+++++.|...                             ..+.++..++.+|+++.++....
T Consensus        84 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~  147 (252)
T PRK06079         84 IDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGS  147 (252)
T ss_pred             CCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCc
Confidence            999999887310                             13344566777899988875443

>PRK09072 short chain dehydrogenase; Provisional

Probab=96.75  E-value=0.028  Score=49.49  Aligned_cols=81  Identities=25%  Similarity=0.325  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-Hc--CCC-eEEecCCC-cccHHHHHHHHHHHhCCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-EL--GAD-NIVKVSTN-LQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~--g~~-~vi~~~~~-~~~~~~~~~~~~~~~~~~  254 (321)
                      ++.++||+|+ |++|...+..+...|+ .|+++++++++.+.+. ++  +.. ..+..+-. ..+..+....+.+  .++
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~--~~~   80 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARARE--MGG   80 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHh--cCC
Confidence            4678999998 9999999998888998 5888888877665443 22  211 12221111 1222222222222  357


Q ss_pred             ccEEEEcCCC
Q 020768          255 IDVSFDCAGF  264 (321)
Q Consensus       255 ~d~vid~~g~  264 (321)
                      +|+++.+.|.
T Consensus        81 id~lv~~ag~   90 (263)
T PRK09072         81 INVLINNAGV   90 (263)
T ss_pred             CCEEEECCCC
Confidence            8999999875

>PRK04148 hypothetical protein; Provisional

Probab=96.72  E-value=0.051  Score=42.69  Aligned_cols=113  Identities=13%  Similarity=0.142  Sum_probs=74.8

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      ..+.+++++|.| .|...+..+...|. .|+++|.+++..+.+++.+.+.+.+.-. +.++    . +    -.++|++.
T Consensus        15 ~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf-~p~~----~-~----y~~a~liy   82 (134)
T PRK04148         15 GKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLF-NPNL----E-I----YKNAKLIY   82 (134)
T ss_pred             ccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCC-CCCH----H-H----HhcCCEEE
Confidence            456889999999 88755555667898 7999999999999999988765543111 1111    1 1    25789999


Q ss_pred             EcCCCHHHHHHHHHHcccC-CEEEEEcCCCCCccccchhhhccceE
Q 020768          260 DCAGFNKTMSTALSATRAG-GKVCLVGMGHLEMTVPLTPAAARYLI  304 (321)
Q Consensus       260 d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~k~~~  304 (321)
                      ..-..++..+.+++.-+.- ..++..-..+.....++...-+|+..
T Consensus        83 sirpp~el~~~~~~la~~~~~~~~i~~l~~e~~~~~~kl~ny~~~~  128 (134)
T PRK04148         83 SIRPPRDLQPFILELAKKINVPLIIKPLSGEEPIKELKLINYKGKP  128 (134)
T ss_pred             EeCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCcceEEEecCCeE
Confidence            9999888877888776554 45555554444333333333344443

>PRK07832 short chain dehydrogenase; Provisional

Probab=96.72  E-value=0.06  Score=47.66  Aligned_cols=78  Identities=27%  Similarity=0.387  Sum_probs=48.2

Q ss_pred             EEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCeE----EecCCCcccHHHHHHHHHHHhCCC
Q 020768          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNI----VKVSTNLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       184 ~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~v----i~~~~~~~~~~~~~~~~~~~~~~~  254 (321)
                      +++|+|+ |++|...++.+...|+ .|+.+++++++.+..    +..+...+    .|..+ ..+..+...++.. ..++
T Consensus         2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~-~~~~   78 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISD-YDAVAAFAADIHA-AHGS   78 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC-HHHHHHHHHHHHH-hcCC
Confidence            6899998 9999999999888998 577777776654332    22333221    23221 1222222333322 2357


Q ss_pred             ccEEEEcCCC
Q 020768          255 IDVSFDCAGF  264 (321)
Q Consensus       255 ~d~vid~~g~  264 (321)
                      +|++|.+.|.
T Consensus        79 id~lv~~ag~   88 (272)
T PRK07832         79 MDVVMNIAGI   88 (272)
T ss_pred             CCEEEECCCC
Confidence            9999999974

>PRK07576 short chain dehydrogenase; Provisional

Probab=96.71  E-value=0.066  Score=47.21  Aligned_cols=81  Identities=19%  Similarity=0.229  Sum_probs=50.1

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-H---HcCCC-eEEecCCC-cccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-K---ELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~---~~g~~-~vi~~~~~-~~~~~~~~~~~~~~~~~  253 (321)
                      ++.++||+|+ |++|...++.+...|+ .|+.+++++++.+.. +   +.+.. ..+..+-. ..+..+.+.+.... .+
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~-~~   85 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADE-FG   85 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence            5789999998 9999999999889999 588887776554322 2   22322 12222221 22233333333222 35


Q ss_pred             CccEEEEcCC
Q 020768          254 GIDVSFDCAG  263 (321)
Q Consensus       254 ~~d~vid~~g  263 (321)
                      ++|++|.+.|
T Consensus        86 ~iD~vi~~ag   95 (264)
T PRK07576         86 PIDVLVSGAA   95 (264)
T ss_pred             CCCEEEECCC
Confidence            6899998876

>PRK06484 short chain dehydrogenase; Validated

Probab=96.69  E-value=0.05  Score=53.03  Aligned_cols=107  Identities=22%  Similarity=0.253  Sum_probs=69.3

Q ss_pred             CCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-HcCCCe-EEecCC-CcccHHHHHHHHHHHhCCCc
Q 020768          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI  255 (321)
Q Consensus       180 ~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~~  255 (321)
                      ..|+++||+|+ +++|...++.+...|+ .|+.++++.++.+.+. +++... .+..+- +.++..+.+.++.+. .+.+
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~i  344 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQAR-WGRL  344 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHH-cCCC
Confidence            35778999998 9999999999999998 6888888877766554 455432 122221 122333334443322 3579


Q ss_pred             cEEEEcCCCHH--------------------------HHHHHHHHcccCCEEEEEcCCC
Q 020768          256 DVSFDCAGFNK--------------------------TMSTALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       256 d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  288 (321)
                      |++|.+.|...                          ..+.++..++.+|+++.+++..
T Consensus       345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~  403 (520)
T PRK06484        345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIA  403 (520)
T ss_pred             CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchh
Confidence            99999987420                          1344455666779999998653

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.67  E-value=0.032  Score=47.40  Aligned_cols=95  Identities=31%  Similarity=0.338  Sum_probs=57.3

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh-------------------hHH----HHHHHcCCCeEEecCCCc
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-------------------YRL----SVAKELGADNIVKVSTNL  237 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~-------------------~~~----~~~~~~g~~~vi~~~~~~  237 (321)
                      ...+|+|.|+|++|..+++.+...|...+..+|.+.                   .|.    +.++++....-+......
T Consensus        20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~   99 (202)
T TIGR02356        20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKER   99 (202)
T ss_pred             cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhc
Confidence            357899999999999999999999998888888661                   122    223344433222111111


Q ss_pred             ccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCE
Q 020768          238 QDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGK  280 (321)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~  280 (321)
                      -+ .+.+.++    -.++|+||+|..+...-..+-+.+...+.
T Consensus       100 i~-~~~~~~~----~~~~D~Vi~~~d~~~~r~~l~~~~~~~~i  137 (202)
T TIGR02356       100 VT-AENLELL----INNVDLVLDCTDNFATRYLINDACVALGT  137 (202)
T ss_pred             CC-HHHHHHH----HhCCCEEEECCCCHHHHHHHHHHHHHcCC
Confidence            11 1122222    25699999999886554444455444444

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK09186 flagellin modification protein A; Provisional

Probab=96.67  E-value=0.063  Score=46.80  Aligned_cols=81  Identities=23%  Similarity=0.348  Sum_probs=51.0

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHc----CCCe--EEecCC-CcccHHHHHHHHHHHh
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL----GADN--IVKVST-NLQDIAEEVEKIQKAM  251 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~----g~~~--vi~~~~-~~~~~~~~~~~~~~~~  251 (321)
                      .+.++||+|+ |++|...+..+...|+ .|+.+.+++++.+.+ +++    +...  ++..+- +..+..+.+.++.+. 
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~-   80 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEK-   80 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHH-
Confidence            4789999998 9999999999999999 577777776665433 233    2221  112121 222333344443332 


Q ss_pred             CCCccEEEEcCC
Q 020768          252 GTGIDVSFDCAG  263 (321)
Q Consensus       252 ~~~~d~vid~~g  263 (321)
                      .+++|++|.+.+
T Consensus        81 ~~~id~vi~~A~   92 (256)
T PRK09186         81 YGKIDGAVNCAY   92 (256)
T ss_pred             cCCccEEEECCc
Confidence            356999999985

>PRK07060 short chain dehydrogenase; Provisional

Probab=96.65  E-value=0.021  Score=49.44  Aligned_cols=78  Identities=24%  Similarity=0.358  Sum_probs=52.2

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      .+.+++|+|+ |++|...++.+...|. .|++++++.++.+.+ ++.+.. .+..+-.  +. +.+.+..+. ..++|++
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~--~~-~~v~~~~~~-~~~~d~v   81 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCE-PLRLDVG--DD-AAIRAALAA-AGAFDGL   81 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCe-EEEecCC--CH-HHHHHHHHH-hCCCCEE
Confidence            4679999998 9999999999999998 588888887766544 344543 2322222  21 123333222 3578999


Q ss_pred             EEcCCC
Q 020768          259 FDCAGF  264 (321)
Q Consensus       259 id~~g~  264 (321)
                      |.+.|.
T Consensus        82 i~~ag~   87 (245)
T PRK07060         82 VNCAGI   87 (245)
T ss_pred             EECCCC
Confidence            999984

>PRK07062 short chain dehydrogenase; Provisional

Probab=96.64  E-value=0.074  Score=46.75  Aligned_cols=82  Identities=23%  Similarity=0.313  Sum_probs=51.2

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-Hc----CCCeE--EecCC-CcccHHHHHHHHHHHh
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-EL----GADNI--VKVST-NLQDIAEEVEKIQKAM  251 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~----g~~~v--i~~~~-~~~~~~~~~~~~~~~~  251 (321)
                      .+.+++|+|+ +++|...++.+...|+ +|+.+++++++.+.+. ++    +...+  +..+- +..+..+.+.++.+. 
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-   84 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR-   84 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh-
Confidence            4689999998 9999999999999999 5778888776654332 11    11122  21111 122333333333322 


Q ss_pred             CCCccEEEEcCCC
Q 020768          252 GTGIDVSFDCAGF  264 (321)
Q Consensus       252 ~~~~d~vid~~g~  264 (321)
                      .+++|++|.++|.
T Consensus        85 ~g~id~li~~Ag~   97 (265)
T PRK07062         85 FGGVDMLVNNAGQ   97 (265)
T ss_pred             cCCCCEEEECCCC
Confidence            3569999999984

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.62  E-value=0.084  Score=46.89  Aligned_cols=107  Identities=22%  Similarity=0.232  Sum_probs=64.1

Q ss_pred             CCCCEEEEEcC---ChhHHHHHHHHHHcCCCeEEEEeCCh---hHHH-HHHHcCCCeEEecCCC-cccHHHHHHHHHHHh
Q 020768          180 GPETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVDD---YRLS-VAKELGADNIVKVSTN-LQDIAEEVEKIQKAM  251 (321)
Q Consensus       180 ~~g~~vlI~Ga---g~vG~~a~qla~~~g~~~vv~v~~~~---~~~~-~~~~~g~~~vi~~~~~-~~~~~~~~~~~~~~~  251 (321)
                      -.++++||+|+   +++|...+..+...|+ .|+.+.+++   ++.+ +.++++....+..+-. .++..+.+.++.+. 
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-   85 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK-   85 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh-
Confidence            35789999987   5899999999888999 566665543   2333 2344553222322222 22333333333322 


Q ss_pred             CCCccEEEEcCCCH--------------H---------------HHHHHHHHcccCCEEEEEcCCC
Q 020768          252 GTGIDVSFDCAGFN--------------K---------------TMSTALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       252 ~~~~d~vid~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~~~  288 (321)
                      .+.+|++|.+.|..              +               ..+.++..++.+|+++.+++..
T Consensus        86 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~  151 (272)
T PRK08159         86 WGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYG  151 (272)
T ss_pred             cCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccc
Confidence            35799999998731              0               1334456667789998887543

>PRK06949 short chain dehydrogenase; Provisional

Probab=96.60  E-value=0.027  Score=49.18  Aligned_cols=82  Identities=21%  Similarity=0.307  Sum_probs=53.2

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH-c---CCC-eEEecCC-CcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-L---GAD-NIVKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~-~---g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      .+++++|+|+ |++|..++..+...|+ .|+++.++.++.+.+.. +   +.. .++..+- ...+..+.+.++.+ ..+
T Consensus         8 ~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~   85 (258)
T PRK06949          8 EGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAET-EAG   85 (258)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH-hcC
Confidence            4789999998 9999999999999999 68888888776544322 1   211 2222221 22333444444333 245


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      .+|++|.+.|.
T Consensus        86 ~~d~li~~ag~   96 (258)
T PRK06949         86 TIDILVNNSGV   96 (258)
T ss_pred             CCCEEEECCCC
Confidence            79999999983

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=96.59  E-value=0.05  Score=44.05  Aligned_cols=81  Identities=22%  Similarity=0.258  Sum_probs=51.5

Q ss_pred             CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCC--hhHHH-HH---HHcCCCeEEe--cC-CCcccHHHHHHHHHHHhC
Q 020768          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD--DYRLS-VA---KELGADNIVK--VS-TNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~--~~~~~-~~---~~~g~~~vi~--~~-~~~~~~~~~~~~~~~~~~  252 (321)
                      ++++|+|+ +++|...++.+...|..+++.+.++  .++.+ +.   +..+ ..+..  .+ ...++..+.+.++.+ ..
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~-~~   78 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPG-AKITFIECDLSDPESIRALIEEVIK-RF   78 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTT-SEEEEEESETTSHHHHHHHHHHHHH-HH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccc-ccccccccccccccccccccccccc-cc
Confidence            36899998 9999999888888887788888887  34333 32   3344 32222  22 122333444444432 24


Q ss_pred             CCccEEEEcCCCH
Q 020768          253 TGIDVSFDCAGFN  265 (321)
Q Consensus       253 ~~~d~vid~~g~~  265 (321)
                      ..+|++|.+.|..
T Consensus        79 ~~ld~li~~ag~~   91 (167)
T PF00106_consen   79 GPLDILINNAGIF   91 (167)
T ss_dssp             SSESEEEEECSCT
T ss_pred             ccccccccccccc
Confidence            6799999998864

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=96.59  E-value=0.064  Score=46.97  Aligned_cols=81  Identities=28%  Similarity=0.308  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH---cCCCe-E--EecCCCcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE---LGADN-I--VKVSTNLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~---~g~~~-v--i~~~~~~~~~~~~~~~~~~~~~~  253 (321)
                      .+.++||+|+ |++|...++.+...|+ .|+.+++++...+..++   .+.+. .  .|.. +..+..+.+.++.+. .+
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~-~~   83 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLE-TYAGAQAAMAAAVEA-FG   83 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCC-CHHHHHHHHHHHHHH-cC
Confidence            4678999998 9999999999888998 57777776543333333   23322 1  2222 122333344444332 35


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|+++.++|.
T Consensus        84 ~id~lv~nAg~   94 (260)
T PRK12823         84 RIDVLINNVGG   94 (260)
T ss_pred             CCeEEEECCcc
Confidence            79999999873

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=96.57  E-value=0.0061  Score=58.66  Aligned_cols=78  Identities=22%  Similarity=0.341  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh---------------------hHHHHHHHcCCCeEEecCCCccc
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD---------------------YRLSVAKELGADNIVKVSTNLQD  239 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~---------------------~~~~~~~~~g~~~vi~~~~~~~~  239 (321)
                      .+++|+|+|+|+.|+.++..++..|.+ |++.+..+                     ...+.++++|++...+..-. .+
T Consensus       140 ~~~~V~IIG~GpaGl~aA~~l~~~G~~-V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~-~~  217 (467)
T TIGR01318       140 TGKRVAVIGAGPAGLACADILARAGVQ-VVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVG-RD  217 (467)
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHcCCe-EEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeC-Cc
Confidence            578999999999999999999999994 66666543                     34567788887654432111 11


Q ss_pred             HHHHHHHHHHHhCCCccEEEEcCCCHH
Q 020768          240 IAEEVEKIQKAMGTGIDVSFDCAGFNK  266 (321)
Q Consensus       240 ~~~~~~~~~~~~~~~~d~vid~~g~~~  266 (321)
                      .  .+..+    ..++|.||.++|...
T Consensus       218 ~--~~~~~----~~~~D~vilAtGa~~  238 (467)
T TIGR01318       218 I--SLDDL----LEDYDAVFLGVGTYR  238 (467)
T ss_pred             c--CHHHH----HhcCCEEEEEeCCCC
Confidence            1  11122    135899999999753

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.54  E-value=0.039  Score=47.93  Aligned_cols=81  Identities=17%  Similarity=0.262  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCe-EEecCCC-cccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~  253 (321)
                      ++.++||+|+ |++|..+++.+...|. +|+.++++.++.+.+    +..+... .+..+-. ..+..+.+..+.+. .+
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   81 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAED-FG   81 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence            4789999998 9999999999999998 678888877654433    2234331 2222211 12333333333221 35


Q ss_pred             CccEEEEcCC
Q 020768          254 GIDVSFDCAG  263 (321)
Q Consensus       254 ~~d~vid~~g  263 (321)
                      ++|++|.+.|
T Consensus        82 ~id~vi~~ag   91 (253)
T PRK08217         82 QLNGLINNAG   91 (253)
T ss_pred             CCCEEEECCC
Confidence            7899999987

>PRK06198 short chain dehydrogenase; Provisional

Probab=96.53  E-value=0.082  Score=46.24  Aligned_cols=83  Identities=20%  Similarity=0.251  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHH----HHHHcCCCe-EEecCCC-cccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS----VAKELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~----~~~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~  253 (321)
                      .+.+++|+|+ |++|...++.+...|++.|++++++.++.+    .+++.+... .+..+-. ..+..+.+..+... .+
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g   83 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEA-FG   83 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH-hC
Confidence            5678999998 999999999999999964888877765443    223334322 1212211 22233333333222 24


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|.+.|.
T Consensus        84 ~id~li~~ag~   94 (260)
T PRK06198         84 RLDALVNAAGL   94 (260)
T ss_pred             CCCEEEECCCc
Confidence            69999999984

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.53  E-value=0.091  Score=46.42  Aligned_cols=81  Identities=17%  Similarity=0.203  Sum_probs=47.6

Q ss_pred             CCCEEEEEcC-C--hhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCeEEecCC-CcccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-G--PIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVST-NLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g--~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~-~~~~~~~~~~~~~~~~~  252 (321)
                      .|.+++|+|+ +  ++|.++++.+...|+ .|+.++++++..+.+++    .+....+..+- +..+..+.+.++.+. .
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~   82 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKV-W   82 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhh-c
Confidence            4788999998 4  899998888888999 56666665321222222    23222222222 223333344443332 3


Q ss_pred             CCccEEEEcCC
Q 020768          253 TGIDVSFDCAG  263 (321)
Q Consensus       253 ~~~d~vid~~g  263 (321)
                      +.+|++|++.|
T Consensus        83 g~iD~linnAg   93 (262)
T PRK07984         83 PKFDGFVHSIG   93 (262)
T ss_pred             CCCCEEEECCc
Confidence            56999999997

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.53  E-value=0.027  Score=49.29  Aligned_cols=81  Identities=22%  Similarity=0.238  Sum_probs=49.5

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEe-CChhHHHHHHHcCCCeE-EecCCCcccHHHHHHHHHHHhCCCccE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVD-VDDYRLSVAKELGADNI-VKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~-~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      .+.+++|+|+ |++|...++.+...|++ |+.+. ++++..+.+++.+...+ .|.. +..+..+.+.++.+. .+++|+
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~~-v~~~~~~~~~~~~~l~~~~~~~~~~Dl~-~~~~~~~~~~~~~~~-~~~id~   82 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGAK-VAVLYNSAENEAKELREKGVFTIKCDVG-NRDQVKKSKEVVEKE-FGRVDV   82 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCcHHHHHHHHhCCCeEEEecCC-CHHHHHHHHHHHHHH-cCCCCE
Confidence            4688999998 99999999999889995 55543 34444444444343222 1222 223333334443322 357999


Q ss_pred             EEEcCCC
Q 020768          258 SFDCAGF  264 (321)
Q Consensus       258 vid~~g~  264 (321)
                      +|.+.|.
T Consensus        83 li~~ag~   89 (255)
T PRK06463         83 LVNNAGI   89 (255)
T ss_pred             EEECCCc
Confidence            9999874

>PRK07904 short chain dehydrogenase; Provisional

Probab=96.53  E-value=0.059  Score=47.26  Aligned_cols=83  Identities=20%  Similarity=0.346  Sum_probs=49.7

Q ss_pred             CCCCCEEEEEcC-ChhHHHHHHHHHHcC-CCeEEEEeCChhH-HH-H---HHHcCCC--eEEecCCC-cccHHHHHHHHH
Q 020768          179 IGPETNVLIMGA-GPIGLVTMLGARAFG-APRIVIVDVDDYR-LS-V---AKELGAD--NIVKVSTN-LQDIAEEVEKIQ  248 (321)
Q Consensus       179 ~~~g~~vlI~Ga-g~vG~~a~qla~~~g-~~~vv~v~~~~~~-~~-~---~~~~g~~--~vi~~~~~-~~~~~~~~~~~~  248 (321)
                      +..+.++||+|+ |++|...++-+...| + .|+.++++.++ .+ .   +++.+..  .++..+-. ..+..+.++++.
T Consensus         5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   83 (253)
T PRK07904          5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF   83 (253)
T ss_pred             cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence            456789999999 999999998776664 6 67777776654 22 2   2333321  22322222 223333344443


Q ss_pred             HHhCCCccEEEEcCCC
Q 020768          249 KAMGTGIDVSFDCAGF  264 (321)
Q Consensus       249 ~~~~~~~d~vid~~g~  264 (321)
                      +  .+++|+++.+.|.
T Consensus        84 ~--~g~id~li~~ag~   97 (253)
T PRK07904         84 A--GGDVDVAIVAFGL   97 (253)
T ss_pred             h--cCCCCEEEEeeec
Confidence            2  2579999987765

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=96.53  E-value=0.031  Score=46.82  Aligned_cols=99  Identities=20%  Similarity=0.239  Sum_probs=63.7

Q ss_pred             CCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHHhCCC
Q 020768          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       179 ~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~  254 (321)
                      ++++.+||-+|+|. |..++.+++......|++++.+++..+.++    +.+.+.+.....   +..    ++..  ...
T Consensus        43 l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~---d~~----~~~~--~~~  112 (187)
T PRK00107         43 LPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHG---RAE----EFGQ--EEK  112 (187)
T ss_pred             cCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEec---cHh----hCCC--CCC
Confidence            45689999998844 555556665544447999999988776554    455543222211   111    1111  357


Q ss_pred             ccEEEEcCCC--HHHHHHHHHHcccCCEEEEEcCC
Q 020768          255 IDVSFDCAGF--NKTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       255 ~d~vid~~g~--~~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      +|+|+-....  +..+..+.+.|+++|+++.+-..
T Consensus       113 fDlV~~~~~~~~~~~l~~~~~~LkpGG~lv~~~~~  147 (187)
T PRK00107        113 FDVVTSRAVASLSDLVELCLPLLKPGGRFLALKGR  147 (187)
T ss_pred             ccEEEEccccCHHHHHHHHHHhcCCCeEEEEEeCC
Confidence            9999974332  35777889999999999988544

>PRK06128 oxidoreductase; Provisional

Probab=96.52  E-value=0.084  Score=47.56  Aligned_cols=106  Identities=20%  Similarity=0.193  Sum_probs=62.7

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChh--H----HHHHHHcCCCe-EEecCCC-cccHHHHHHHHHHHh
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY--R----LSVAKELGADN-IVKVSTN-LQDIAEEVEKIQKAM  251 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~--~----~~~~~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~  251 (321)
                      .+.++||+|+ |++|...+..+...|++ |+.+..+.+  +    .+.++..+... .+..+-. ..+..+.+.++.+. 
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~~-V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-  131 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGAD-IALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE-  131 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCCE-EEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH-
Confidence            4689999998 99999999999889994 555544321  1    22333444332 1222211 22233333333322 


Q ss_pred             CCCccEEEEcCCCH--------------------------HHHHHHHHHcccCCEEEEEcCCC
Q 020768          252 GTGIDVSFDCAGFN--------------------------KTMSTALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       252 ~~~~d~vid~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~~  288 (321)
                      .+++|++|.+.|..                          ...+.++..++.+|+++.++...
T Consensus       132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~  194 (300)
T PRK06128        132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQ  194 (300)
T ss_pred             hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCcc
Confidence            35799999998841                          02344555567788999987543

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=96.51  E-value=0.036  Score=48.77  Aligned_cols=82  Identities=22%  Similarity=0.264  Sum_probs=53.4

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-HcCCC-eEEecCC-CcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .++++||+|+ +++|...++.+...|+ .|+.+++++++.+.+. +++.. ..+..+- +..+..+.+.++.+. .+.+|
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~id   82 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDA-FGKLD   82 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHh-cCCCC
Confidence            4789999998 9999999999999999 5888888877766554 34321 1222111 122333334443332 35799


Q ss_pred             EEEEcCCC
Q 020768          257 VSFDCAGF  264 (321)
Q Consensus       257 ~vid~~g~  264 (321)
                      ++|.+.|-
T Consensus        83 ~li~~ag~   90 (263)
T PRK06200         83 CFVGNAGI   90 (263)
T ss_pred             EEEECCCC
Confidence            99999883

>PRK05866 short chain dehydrogenase; Provisional

Probab=96.51  E-value=0.036  Score=49.82  Aligned_cols=82  Identities=24%  Similarity=0.307  Sum_probs=51.8

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCC-eEEecCCC-cccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~-~vi~~~~~-~~~~~~~~~~~~~~~~~  253 (321)
                      .+.+++|+|+ |++|...++.+...|. .|++++++.++.+.+.    +.+.+ ..+..+-. ..+..+.+..+.+. .+
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~-~g  116 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR-IG  116 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence            3578999998 9999999999888898 6888888876654332    22322 12222211 22333333333222 35


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|+++.+.|.
T Consensus       117 ~id~li~~AG~  127 (293)
T PRK05866        117 GVDILINNAGR  127 (293)
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=96.50  E-value=0.11  Score=45.25  Aligned_cols=82  Identities=30%  Similarity=0.489  Sum_probs=51.0

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHc---CCC-eEEecCCC-cccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~---g~~-~vi~~~~~-~~~~~~~~~~~~~~~~~  253 (321)
                      .+.++||+|+ |++|...++.+...|+ .++.++++.++.+.+ .++   +.. ..+..+-. ..+..+.+..+.+. .+
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~   85 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKD-IG   85 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHh-cC
Confidence            4678999998 9999999999988998 677787776654332 222   322 12222222 22333333333322 35


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|+++.+.|.
T Consensus        86 ~id~vi~~ag~   96 (254)
T PRK08085         86 PIDVLINNAGI   96 (254)
T ss_pred             CCCEEEECCCc
Confidence            79999999984

>PRK06179 short chain dehydrogenase; Provisional

Probab=96.47  E-value=0.065  Score=47.28  Aligned_cols=79  Identities=22%  Similarity=0.263  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeE-EecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI-VKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      .+.+++|+|+ |++|...++.+...|+ .|++++++.++.+..  .+...+ .|+. +.+++.+.+..+.+. .+.+|++
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~--~~~~~~~~D~~-d~~~~~~~~~~~~~~-~g~~d~l   77 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPI--PGVELLELDVT-DDASVQAAVDEVIAR-AGRIDVL   77 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccc--CCCeeEEeecC-CHHHHHHHHHHHHHh-CCCCCEE
Confidence            3568999998 9999999998888898 588887776554322  122221 1221 223344444444332 3579999


Q ss_pred             EEcCCC
Q 020768          259 FDCAGF  264 (321)
Q Consensus       259 id~~g~  264 (321)
                      |.+.|.
T Consensus        78 i~~ag~   83 (270)
T PRK06179         78 VNNAGV   83 (270)
T ss_pred             EECCCC
Confidence            999985

>PRK09242 tropinone reductase; Provisional

Probab=96.46  E-value=0.15  Score=44.59  Aligned_cols=82  Identities=24%  Similarity=0.283  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-Hc-----CCCe-EEecCC-CcccHHHHHHHHHHHh
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-EL-----GADN-IVKVST-NLQDIAEEVEKIQKAM  251 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~-----g~~~-vi~~~~-~~~~~~~~~~~~~~~~  251 (321)
                      .+.++||+|+ |++|...+..+...|+ .|+.++++.++.+.+. ++     +.+. .+..+- +..+..+.+.++.+. 
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-   85 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDH-   85 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHH-
Confidence            4789999998 9999999999999999 5777777776654332 22     2111 111111 122333333333332 


Q ss_pred             CCCccEEEEcCCC
Q 020768          252 GTGIDVSFDCAGF  264 (321)
Q Consensus       252 ~~~~d~vid~~g~  264 (321)
                      .+++|+++.+.|.
T Consensus        86 ~g~id~li~~ag~   98 (257)
T PRK09242         86 WDGLHILVNNAGG   98 (257)
T ss_pred             cCCCCEEEECCCC
Confidence            3579999999985

>PRK07831 short chain dehydrogenase; Provisional

Probab=96.44  E-value=0.042  Score=48.29  Aligned_cols=84  Identities=27%  Similarity=0.360  Sum_probs=52.8

Q ss_pred             CCCCCEEEEEcC-C-hhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH-----cCCCeE--EecCCC-cccHHHHHHHHH
Q 020768          179 IGPETNVLIMGA-G-PIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-----LGADNI--VKVSTN-LQDIAEEVEKIQ  248 (321)
Q Consensus       179 ~~~g~~vlI~Ga-g-~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~-----~g~~~v--i~~~~~-~~~~~~~~~~~~  248 (321)
                      +..+++++|+|+ | ++|..+++.+...|+ .|++++++.++.+...+     ++...+  +..+-. ..+..+.+.++.
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   92 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV   92 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            345789999987 6 799999999999999 57777777765543321     443332  211211 122333333332


Q ss_pred             HHhCCCccEEEEcCCC
Q 020768          249 KAMGTGIDVSFDCAGF  264 (321)
Q Consensus       249 ~~~~~~~d~vid~~g~  264 (321)
                      +. .+++|++|.+.|.
T Consensus        93 ~~-~g~id~li~~ag~  107 (262)
T PRK07831         93 ER-LGRLDVLVNNAGL  107 (262)
T ss_pred             HH-cCCCCEEEECCCC
Confidence            22 3579999999984

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=96.44  E-value=0.034  Score=48.90  Aligned_cols=81  Identities=26%  Similarity=0.235  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH-cCCCe-EEecCC-CcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~-~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .+.+++|+|+ |++|...++.+...|+ .|++++++.++.+.+.+ .+... .+..+- +..+..+.+.++.+. .+.+|
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~id   81 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAA-FGKID   81 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHH-hCCCC
Confidence            4689999998 9999999999989999 67888887776655544 33221 121111 112233333333322 35789


Q ss_pred             EEEEcCC
Q 020768          257 VSFDCAG  263 (321)
Q Consensus       257 ~vid~~g  263 (321)
                      ++|.+.|
T Consensus        82 ~li~~Ag   88 (262)
T TIGR03325        82 CLIPNAG   88 (262)
T ss_pred             EEEECCC
Confidence            9999987

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=96.44  E-value=0.09  Score=45.97  Aligned_cols=82  Identities=18%  Similarity=0.275  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH----HHHcCCCe-EEecCCCc-ccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGADN-IVKVSTNL-QDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~----~~~~g~~~-vi~~~~~~-~~~~~~~~~~~~~~~~  253 (321)
                      .+.++||+|+ |++|..++..+...|. .|+.+++++++.+.    +++.+... .+..+-.+ ....+.+.++.. ..+
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~   83 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAE-RFG   83 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHH-HcC
Confidence            4689999999 9999999999989999 57777777654432    23334332 12222111 222223333322 135


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|.+.|.
T Consensus        84 ~~d~vi~~ag~   94 (262)
T PRK13394         84 SVDILVSNAGI   94 (262)
T ss_pred             CCCEEEECCcc
Confidence            68999999875

>PRK05884 short chain dehydrogenase; Provisional

Probab=96.43  E-value=0.086  Score=45.26  Aligned_cols=75  Identities=24%  Similarity=0.333  Sum_probs=47.0

Q ss_pred             EEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 020768          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (321)
Q Consensus       184 ~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  261 (321)
                      +++|+|+ |++|...++.+...|. .|+.++++.++.+.+ ++++...+ ..+-.+.+   .+.++.+.....+|+++++
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~-~~D~~~~~---~v~~~~~~~~~~id~lv~~   76 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAI-VCDNTDPA---SLEEARGLFPHHLDTIVNV   76 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEE-ecCCCCHH---HHHHHHHHHhhcCcEEEEC
Confidence            5899998 9999999998888898 677778887766543 44554322 22211111   2222222112368999998


Q ss_pred             CC
Q 020768          262 AG  263 (321)
Q Consensus       262 ~g  263 (321)
                      .|
T Consensus        77 ag   78 (223)
T PRK05884         77 PA   78 (223)
T ss_pred             CC
Confidence            65

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=96.42  E-value=0.079  Score=46.14  Aligned_cols=82  Identities=26%  Similarity=0.360  Sum_probs=50.9

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HH---cCCCe-EEecCCC-cccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~---~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~  253 (321)
                      .+.++||+|+ |.+|...++.+...|. .|+++++++++.+.+ .+   .+... .+..+-. ..+..+.+..+.+. .+
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~   80 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVET-FG   80 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence            4679999998 9999999998888898 577787777654432 22   23221 2222222 22333333333322 35


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|.++|.
T Consensus        81 ~~d~vi~~a~~   91 (258)
T PRK12429         81 GVDILVNNAGI   91 (258)
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>PRK12829 short chain dehydrogenase; Provisional

Probab=96.42  E-value=0.038  Score=48.39  Aligned_cols=85  Identities=20%  Similarity=0.234  Sum_probs=53.8

Q ss_pred             CCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH-cCCC--eEEecCCC-cccHHHHHHHHHHHhCC
Q 020768          179 IGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGAD--NIVKVSTN-LQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       179 ~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~-~g~~--~vi~~~~~-~~~~~~~~~~~~~~~~~  253 (321)
                      .-++.++||+|+ |++|...+..+...|. .|+++.++.+..+.+.+ ..-.  ..+..+-. .....+.+.++.+. -.
T Consensus         8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   85 (264)
T PRK12829          8 PLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVER-FG   85 (264)
T ss_pred             ccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHH-hC
Confidence            356789999999 9999999999999999 58888877665554433 3221  22222211 22223333333322 25


Q ss_pred             CccEEEEcCCCH
Q 020768          254 GIDVSFDCAGFN  265 (321)
Q Consensus       254 ~~d~vid~~g~~  265 (321)
                      ++|+||.+.|..
T Consensus        86 ~~d~vi~~ag~~   97 (264)
T PRK12829         86 GLDVLVNNAGIA   97 (264)
T ss_pred             CCCEEEECCCCC
Confidence            799999988853

>PRK08177 short chain dehydrogenase; Provisional

Probab=96.42  E-value=0.03  Score=48.01  Aligned_cols=78  Identities=21%  Similarity=0.241  Sum_probs=49.7

Q ss_pred             CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCc-ccHHHHHHHHHHHhCCCccEEEE
Q 020768          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~-~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      .+++|+|+ |++|...+..+...|. .|+++++++++.+.+++++-......+-.+ ++..+....+   ...++|++|.
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~---~~~~id~vi~   77 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRL---QGQRFDLLFV   77 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHh---hcCCCCEEEE
Confidence            47899998 9999998888888898 688888887766555554322222222111 1222222222   2357999999


Q ss_pred             cCCC
Q 020768          261 CAGF  264 (321)
Q Consensus       261 ~~g~  264 (321)
                      +.|.
T Consensus        78 ~ag~   81 (225)
T PRK08177         78 NAGI   81 (225)
T ss_pred             cCcc
Confidence            8764

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.42  E-value=0.094  Score=46.09  Aligned_cols=107  Identities=16%  Similarity=0.209  Sum_probs=62.4

Q ss_pred             CCCEEEEEcC---ChhHHHHHHHHHHcCCCeEEEEeCCh---hHHH-HHHHcCCCe--EEecCC-CcccHHHHHHHHHHH
Q 020768          181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVDD---YRLS-VAKELGADN--IVKVST-NLQDIAEEVEKIQKA  250 (321)
Q Consensus       181 ~g~~vlI~Ga---g~vG~~a~qla~~~g~~~vv~v~~~~---~~~~-~~~~~g~~~--vi~~~~-~~~~~~~~~~~~~~~  250 (321)
                      .|++++|+|+   +++|..+++.+...|+ +|+.+.++.   ++.+ ..+++....  .+..+- +.++..+.+.++.+.
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   84 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEE   84 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHh
Confidence            4688999987   4999999988888999 566664432   3333 333442111  121111 223333344444332


Q ss_pred             hCCCccEEEEcCCCHH-----------------------------HHHHHHHHcccCCEEEEEcCCCC
Q 020768          251 MGTGIDVSFDCAGFNK-----------------------------TMSTALSATRAGGKVCLVGMGHL  289 (321)
Q Consensus       251 ~~~~~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~~  289 (321)
                       .+++|+++.+.|...                             ..+.++..++++|+++.+++...
T Consensus        85 -~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~  151 (257)
T PRK08594         85 -VGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGG  151 (257)
T ss_pred             -CCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCC
Confidence             357999999876310                             12344556677899999986543

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=96.42  E-value=0.015  Score=47.80  Aligned_cols=100  Identities=18%  Similarity=0.226  Sum_probs=65.6

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEe-cCCC--------------cccHHHHHHH
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVK-VSTN--------------LQDIAEEVEK  246 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~-~~~~--------------~~~~~~~~~~  246 (321)
                      .-+|+|+|+|.+|+.|+.+++.+|+ .+++.+...++.+..+..+...+.. +...              .......+.+
T Consensus        20 p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~   98 (168)
T PF01262_consen   20 PAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE   98 (168)
T ss_dssp             T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred             CeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence            4689999999999999999999999 6888999999988888887755433 1111              1122222322


Q ss_pred             HHHHhCCCccEEEEcCC--C---HHH-HHHHHHHcccCCEEEEEcC
Q 020768          247 IQKAMGTGIDVSFDCAG--F---NKT-MSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       247 ~~~~~~~~~d~vid~~g--~---~~~-~~~~~~~l~~~G~~v~~g~  286 (321)
                      ..    ..+|++|.+.-  +   +.. -+..++.|+++..++.++-
T Consensus        99 ~i----~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~  140 (168)
T PF01262_consen   99 FI----APADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISC  140 (168)
T ss_dssp             HH----HH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTG
T ss_pred             HH----hhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEe
Confidence            22    24688885321  1   111 2366788999999999973

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK06841 short chain dehydrogenase; Provisional

Probab=96.41  E-value=0.044  Score=47.84  Aligned_cols=82  Identities=23%  Similarity=0.246  Sum_probs=53.0

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCe--EEecCC-CcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN--IVKVST-NLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~--vi~~~~-~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .+.++||+|+ |++|...++.+...|+ .|+.++++.+..+...++....  .+..+- +..+..+.+.++.+. ..++|
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~~d   91 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISA-FGRID   91 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHH-hCCCC
Confidence            4679999998 9999999998888998 5888888776655555543222  222222 122333333333322 35799


Q ss_pred             EEEEcCCC
Q 020768          257 VSFDCAGF  264 (321)
Q Consensus       257 ~vid~~g~  264 (321)
                      ++|.+.|.
T Consensus        92 ~vi~~ag~   99 (255)
T PRK06841         92 ILVNSAGV   99 (255)
T ss_pred             EEEECCCC
Confidence            99999984

>PRK12937 short chain dehydrogenase; Provisional

Probab=96.40  E-value=0.11  Score=44.92  Aligned_cols=105  Identities=16%  Similarity=0.177  Sum_probs=61.2

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeC-ChhHHH----HHHHcCCC-eEEecCC-CcccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV-DDYRLS----VAKELGAD-NIVKVST-NLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~-~~~~~~----~~~~~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~  252 (321)
                      ++.+++|+|+ |++|...++.+...|.+ ++.+.+ ++++.+    .++..+.. ..+..+- +..+..+.+.++.+. .
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~   81 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGFA-VAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETA-F   81 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-c
Confidence            4678999998 99999999999999995 544443 332222    22233322 1222221 122333333333322 3


Q ss_pred             CCccEEEEcCCCHH-------------------------HHHHHHHHcccCCEEEEEcCC
Q 020768          253 TGIDVSFDCAGFNK-------------------------TMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       253 ~~~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      +++|++|.+.|...                         ..+.+++.++.+|+++.++..
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~  141 (245)
T PRK12937         82 GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTS  141 (245)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeec
Confidence            57999999988420                         133444555677899999854

>PRK07402 precorrin-6B methylase; Provisional

Probab=96.39  E-value=0.12  Score=43.49  Aligned_cols=106  Identities=12%  Similarity=0.286  Sum_probs=64.2

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHH
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      +....++++++||=.|+|. |..++.+++......+++++.+++..+.+++    ++...+.....   +..+.+..+  
T Consensus        33 ~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~---d~~~~~~~~--  106 (196)
T PRK07402         33 ISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEG---SAPECLAQL--  106 (196)
T ss_pred             HHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEEC---chHHHHhhC--
Confidence            3556778889888777643 4455566665433479999999988776653    56543322211   222222111  


Q ss_pred             HhCCCccE-EEEcCCC-HHHHHHHHHHcccCCEEEEEcCC
Q 020768          250 AMGTGIDV-SFDCAGF-NKTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       250 ~~~~~~d~-vid~~g~-~~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                        ...+|. .++.... ...++.+.+.|+++|+++.....
T Consensus       107 --~~~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~  144 (196)
T PRK07402        107 --APAPDRVCIEGGRPIKEILQAVWQYLKPGGRLVATASS  144 (196)
T ss_pred             --CCCCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEeec
Confidence              122344 4443222 36788999999999999888643

>PRK08263 short chain dehydrogenase; Provisional

Probab=96.38  E-value=0.081  Score=46.90  Aligned_cols=81  Identities=22%  Similarity=0.223  Sum_probs=50.6

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH-cCCC-eEEecCC-CcccHHHHHHHHHHHhCCCccE
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~-~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      +.++||+|+ |++|..+++.+...|. .|+.++++.++.+.+.+ ++.. ..+..+- +..+..+.+..+.+ ..+++|.
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~~d~   80 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVE-HFGRLDI   80 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHH-HcCCCCE
Confidence            468999998 9999999988888898 68888888776654443 3321 1122111 12223333333322 2357899


Q ss_pred             EEEcCCC
Q 020768          258 SFDCAGF  264 (321)
Q Consensus       258 vid~~g~  264 (321)
                      +|.+.|.
T Consensus        81 vi~~ag~   87 (275)
T PRK08263         81 VVNNAGY   87 (275)
T ss_pred             EEECCCC
Confidence            9999885

>PRK07677 short chain dehydrogenase; Provisional

Probab=96.38  E-value=0.039  Score=48.16  Aligned_cols=81  Identities=26%  Similarity=0.285  Sum_probs=51.1

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCC-eEEecCC-CcccHHHHHHHHHHHhCCC
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~~  254 (321)
                      |+++||+|+ |++|...++.+...|. .|++++++.++.+.+.    +.+.. ..+..+- +.++..+.+.++.+. .++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   78 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEK-FGR   78 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH-hCC
Confidence            468999998 9999999999999999 6888887776554332    22221 1222221 222333334443332 356


Q ss_pred             ccEEEEcCCC
Q 020768          255 IDVSFDCAGF  264 (321)
Q Consensus       255 ~d~vid~~g~  264 (321)
                      +|++|.+.|.
T Consensus        79 id~lI~~ag~   88 (252)
T PRK07677         79 IDALINNAAG   88 (252)
T ss_pred             ccEEEECCCC
Confidence            8999999873

>PRK06398 aldose dehydrogenase; Validated

Probab=96.38  E-value=0.073  Score=46.75  Aligned_cols=76  Identities=18%  Similarity=0.324  Sum_probs=48.0

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeE-EecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI-VKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      .|+++||+|+ +++|...+..+...|+ .|+.++++.++..     ....+ .|.. +..+..+.+.++.+. .+.+|++
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~-~~~~i~~~~~~~~~~-~~~id~l   76 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVS-NKEQVIKGIDYVISK-YGRIDIL   76 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCC-CHHHHHHHHHHHHHH-cCCCCEE
Confidence            4689999998 9999999999999999 5777776654321     11111 1221 222333334443332 3569999


Q ss_pred             EEcCCC
Q 020768          259 FDCAGF  264 (321)
Q Consensus       259 id~~g~  264 (321)
                      |.+.|.
T Consensus        77 i~~Ag~   82 (258)
T PRK06398         77 VNNAGI   82 (258)
T ss_pred             EECCCC
Confidence            998874

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=96.35  E-value=0.057  Score=46.86  Aligned_cols=82  Identities=21%  Similarity=0.229  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChh--HHHHHHHcCCC-eEEecCC-CcccHHHHHHHHHHHhCCCc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY--RLSVAKELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGI  255 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~--~~~~~~~~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~~~  255 (321)
                      .+.++||+|+ |++|...+..+...|+ .|+.++++..  ..+.+++++.. ..+..+- +..+..+.+.++.+. .+++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~~   81 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEE-FGHI   81 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH-cCCC
Confidence            4789999998 9999999999988999 5777766542  22333444432 1222221 122333333333222 3579


Q ss_pred             cEEEEcCCC
Q 020768          256 DVSFDCAGF  264 (321)
Q Consensus       256 d~vid~~g~  264 (321)
                      |++|.+.|.
T Consensus        82 d~li~~ag~   90 (248)
T TIGR01832        82 DILVNNAGI   90 (248)
T ss_pred             CEEEECCCC
Confidence            999999874

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=96.35  E-value=0.13  Score=44.22  Aligned_cols=81  Identities=26%  Similarity=0.334  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCeEE---ecCCCcccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNIV---KVSTNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~vi---~~~~~~~~~~~~~~~~~~~~~  252 (321)
                      ++.++||+|+ |++|...++.+...|. .|+++.+++++.+..    +..+....+   |.. +.....+.+.++... .
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~-~   80 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVS-DEAAVRALIEAAVEA-F   80 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCC-CHHHHHHHHHHHHHH-h
Confidence            4578999999 9999999999888999 488888887664432    233432221   221 122333333333322 3


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      ..+|.++.+.|.
T Consensus        81 ~~id~vi~~ag~   92 (246)
T PRK05653         81 GALDILVNNAGI   92 (246)
T ss_pred             CCCCEEEECCCc
Confidence            568999999865

>PRK08862 short chain dehydrogenase; Provisional

Probab=96.35  E-value=0.045  Score=47.30  Aligned_cols=82  Identities=17%  Similarity=0.214  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCe-EEecC-CCcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVS-TNLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-vi~~~-~~~~~~~~~~~~~~~~~~~  253 (321)
                      .|.+++|+|+ +++|...+..+...|+ .|+.+.++.++.+.+    ++.+.+. .+..+ .+.++..+.+.++.+..+.
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR   82 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4689999998 9999999988888999 577777777665432    2334332 12112 1223333344444333343


Q ss_pred             CccEEEEcCC
Q 020768          254 GIDVSFDCAG  263 (321)
Q Consensus       254 ~~d~vid~~g  263 (321)
                      .+|++|.+.|
T Consensus        83 ~iD~li~nag   92 (227)
T PRK08862         83 APDVLVNNWT   92 (227)
T ss_pred             CCCEEEECCc
Confidence            7999999986

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=96.33  E-value=0.13  Score=44.68  Aligned_cols=79  Identities=27%  Similarity=0.323  Sum_probs=50.2

Q ss_pred             EEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-HcCCCe-EEecCC-CcccHHHHHHHHHHHhCCCccEEE
Q 020768          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       184 ~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      +++|+|+ |++|...+..+...|+ .|+++++++++.+.+. .++... .+..+- +..+..+.+.++.+. .+++|.++
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~-~~~id~vi   79 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAE-WRNIDVLV   79 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHH-cCCCCEEE
Confidence            6899998 9999999999999999 6888888877765543 344321 111111 122233333333222 35799999


Q ss_pred             EcCCC
Q 020768          260 DCAGF  264 (321)
Q Consensus       260 d~~g~  264 (321)
                      .+.|.
T Consensus        80 ~~ag~   84 (248)
T PRK10538         80 NNAGL   84 (248)
T ss_pred             ECCCc
Confidence            98874

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.30  E-value=0.15  Score=44.09  Aligned_cols=99  Identities=23%  Similarity=0.265  Sum_probs=64.4

Q ss_pred             HHHHHcCC-CCCCEEEEEcCChhHHHHHHHHHHcCCC--eEEEEeCC----hhH--------HHHHHHcCCCeEEecCCC
Q 020768          172 HACRRANI-GPETNVLIMGAGPIGLVTMLGARAFGAP--RIVIVDVD----DYR--------LSVAKELGADNIVKVSTN  236 (321)
Q Consensus       172 ~~l~~~~~-~~g~~vlI~Gag~vG~~a~qla~~~g~~--~vv~v~~~----~~~--------~~~~~~~g~~~vi~~~~~  236 (321)
                      .+++..+. -.+.+++|+|+|+.|..++..+...|.+  +++.++++    .+|        .+++++++... ..    
T Consensus        14 ~al~~~g~~l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~----   88 (226)
T cd05311          14 NALKLVGKKIEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG----   88 (226)
T ss_pred             HHHHHhCCCccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc----
Confidence            33444332 3567999999999999999999999998  89999888    343        34555544211 00    


Q ss_pred             cccHHHHHHHHHHHhCCCccEEEEcCCCHHHH-HHHHHHcccCCEEEEEc
Q 020768          237 LQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTM-STALSATRAGGKVCLVG  285 (321)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~-~~~~~~l~~~G~~v~~g  285 (321)
                       .++.+.+        .++|++|.+++. ..+ ...++.++++..++.+.
T Consensus        89 -~~l~~~l--------~~~dvlIgaT~~-G~~~~~~l~~m~~~~ivf~ls  128 (226)
T cd05311          89 -GTLKEAL--------KGADVFIGVSRP-GVVKKEMIKKMAKDPIVFALA  128 (226)
T ss_pred             -CCHHHHH--------hcCCEEEeCCCC-CCCCHHHHHhhCCCCEEEEeC
Confidence             1222221        248999999973 344 36667777777666555

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=96.29  E-value=0.092  Score=48.80  Aligned_cols=83  Identities=18%  Similarity=0.091  Sum_probs=48.9

Q ss_pred             CCCCEEEEEcC-ChhHHH--HHHHHHHcCCCeEEEEeCCh---h-------------HHHHHHHcCCCe-EEecCCC-cc
Q 020768          180 GPETNVLIMGA-GPIGLV--TMLGARAFGAPRIVIVDVDD---Y-------------RLSVAKELGADN-IVKVSTN-LQ  238 (321)
Q Consensus       180 ~~g~~vlI~Ga-g~vG~~--a~qla~~~g~~~vv~v~~~~---~-------------~~~~~~~~g~~~-vi~~~~~-~~  238 (321)
                      ..++++||+|+ +++|++  .++.+ ..|++ +++++...   +             -.+.+++.|... .+..+-. .+
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~-Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E  116 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGAD-TLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDE  116 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCe-EEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence            44578999998 999999  45555 78984 55665322   1             123455666542 2332222 23


Q ss_pred             cHHHHHHHHHHHhCCCccEEEEcCCCH
Q 020768          239 DIAEEVEKIQKAMGTGIDVSFDCAGFN  265 (321)
Q Consensus       239 ~~~~~~~~~~~~~~~~~d~vid~~g~~  265 (321)
                      +..+.+.++.+. .+++|+++.+.+.+
T Consensus       117 ~v~~lie~I~e~-~G~IDiLVnSaA~~  142 (398)
T PRK13656        117 IKQKVIELIKQD-LGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHHh-cCCCCEEEECCccC
Confidence            333344444432 45799999988875

>PRK06101 short chain dehydrogenase; Provisional

Probab=96.28  E-value=0.1  Score=45.20  Aligned_cols=42  Identities=26%  Similarity=0.253  Sum_probs=33.7

Q ss_pred             CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHc
Q 020768          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL  225 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~  225 (321)
                      .+++|+|+ |++|...+..+...|+ .|+++++++++.+.+.+.
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~   44 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQ   44 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHh
Confidence            46899998 9999988888888899 588888888777655543

>PRK05867 short chain dehydrogenase; Provisional

Probab=96.28  E-value=0.049  Score=47.58  Aligned_cols=82  Identities=24%  Similarity=0.258  Sum_probs=51.8

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-H---cCCCe-EEecCC-CcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-E---LGADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~---~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      .++++||+|+ +++|...++.+...|+ +|+.++++.++.+.+. +   .+... .+..+- +..+..+.+.++.+. .+
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g   85 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAE-LG   85 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH-hC
Confidence            4789999998 9999999999999999 5777777766654332 2   23221 122211 222333334443332 35


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|+++.+.|.
T Consensus        86 ~id~lv~~ag~   96 (253)
T PRK05867         86 GIDIAVCNAGI   96 (253)
T ss_pred             CCCEEEECCCC
Confidence            79999998874

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=96.28  E-value=0.037  Score=49.23  Aligned_cols=99  Identities=14%  Similarity=0.109  Sum_probs=62.5

Q ss_pred             HHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCeEEecCCCcccHHHHHHHHHHH
Q 020768          172 HACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVSTNLQDIAEEVEKIQKA  250 (321)
Q Consensus       172 ~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~~~~~  250 (321)
                      .+++......+.+++|+|+|+.+.+++..+...|+..+.++.++.+|.+.+ +.++..    +       .+.+      
T Consensus       112 ~~L~~~~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~----~-------~~~~------  174 (272)
T PRK12550        112 KLLASYQVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE----W-------RPDL------  174 (272)
T ss_pred             HHHHhcCCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc----c-------hhhc------
Confidence            344444445567899999999999999999999998899999988776654 444321    0       0001      


Q ss_pred             hCCCccEEEEcCCCHHH-------HHHHHHHcccCCEEEEEcCC
Q 020768          251 MGTGIDVSFDCAGFNKT-------MSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       251 ~~~~~d~vid~~g~~~~-------~~~~~~~l~~~G~~v~~g~~  287 (321)
                      ....+|++|+|+.-.-.       ..-....+.++..++.+-+.
T Consensus       175 ~~~~~dlvINaTp~Gm~~~~~~~~~pi~~~~l~~~~~v~D~vY~  218 (272)
T PRK12550        175 GGIEADILVNVTPIGMAGGPEADKLAFPEAEIDAASVVFDVVAL  218 (272)
T ss_pred             ccccCCEEEECCccccCCCCccccCCCCHHHcCCCCEEEEeecC
Confidence            01348999999763210       01112446666666555543

>PRK07774 short chain dehydrogenase; Provisional

Probab=96.27  E-value=0.045  Score=47.56  Aligned_cols=82  Identities=22%  Similarity=0.281  Sum_probs=50.1

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHc---CCC-eEEecCCC-cccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~---g~~-~vi~~~~~-~~~~~~~~~~~~~~~~~  253 (321)
                      .+.+++|+|+ |++|...++.+...|. .|+.+++++++.+.+ +++   +.. ..+..+-. ..+..+...++.+. .+
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~   82 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSA-FG   82 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-hC
Confidence            4678999998 9999999998888998 678888776554332 222   211 12222211 12222233333322 34


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|.+.|.
T Consensus        83 ~id~vi~~ag~   93 (250)
T PRK07774         83 GIDYLVNNAAI   93 (250)
T ss_pred             CCCEEEECCCC
Confidence            69999999883

>PRK07985 oxidoreductase; Provisional

Probab=96.27  E-value=0.14  Score=46.09  Aligned_cols=105  Identities=17%  Similarity=0.156  Sum_probs=62.1

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCC--hhHHHH----HHHcCCCe-EEecCCC-cccHHHHHHHHHHHh
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD--DYRLSV----AKELGADN-IVKVSTN-LQDIAEEVEKIQKAM  251 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~--~~~~~~----~~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~  251 (321)
                      .+.++||+|+ +++|...++.+...|+ .|+.+.++  .++.+.    .++.+... .+..+-. .++..+.+.++.+. 
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-  125 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA-  125 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH-
Confidence            5678999998 9999999999999999 46665433  222222    22334322 1222211 22333333443322 


Q ss_pred             CCCccEEEEcCCCH--------------------------HHHHHHHHHcccCCEEEEEcCC
Q 020768          252 GTGIDVSFDCAGFN--------------------------KTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       252 ~~~~d~vid~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      .+++|+++.+.|..                          ..++.++..++.+|+++.+++.
T Consensus       126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~  187 (294)
T PRK07985        126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSI  187 (294)
T ss_pred             hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCc
Confidence            35799999988731                          1233455556678999998854

>CHL00194 ycf39 Ycf39; Provisional

Probab=96.26  E-value=0.071  Score=48.48  Aligned_cols=95  Identities=18%  Similarity=0.183  Sum_probs=59.8

Q ss_pred             EEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcC
Q 020768          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (321)
Q Consensus       184 ~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  262 (321)
                      +|+|+|+ |.+|...++.+...|. .|.++.++.++...+...+++.+. .+-  .+. +.+.+.    -.++|+||.++
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~-~Dl--~d~-~~l~~a----l~g~d~Vi~~~   72 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVY-GDL--SLP-ETLPPS----FKGVTAIIDAS   72 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEE-CCC--CCH-HHHHHH----HCCCCEEEECC
Confidence            6999998 9999999999888998 577777776665555555554322 111  121 223222    14689999987


Q ss_pred             CCHH------------HHHHHHHHcccCC--EEEEEcCC
Q 020768          263 GFNK------------TMSTALSATRAGG--KVCLVGMG  287 (321)
Q Consensus       263 g~~~------------~~~~~~~~l~~~G--~~v~~g~~  287 (321)
                      +...            ....+++.++..|  +++.++..
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~  111 (317)
T CHL00194         73 TSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL  111 (317)
T ss_pred             CCCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence            6321            1134555555554  78888764

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=96.26  E-value=0.065  Score=45.88  Aligned_cols=105  Identities=16%  Similarity=0.174  Sum_probs=63.4

Q ss_pred             CCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCeEEe-c------CCCccc-HHHHHHHHHH
Q 020768          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVK-V------STNLQD-IAEEVEKIQK  249 (321)
Q Consensus       179 ~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~vi~-~------~~~~~~-~~~~~~~~~~  249 (321)
                      ..++.+||+.|+|. |.-++.+|. .|. .|++++-++...+.+ ++.+...... .      ....-+ ....+.++..
T Consensus        32 ~~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~  108 (213)
T TIGR03840        32 LPAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA  108 (213)
T ss_pred             CCCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc
Confidence            35778999999865 777777775 698 699999999888864 3344321100 0      000000 0000001100


Q ss_pred             HhCCCccEEEEcCC--------CHHHHHHHHHHcccCCEEEEEcC
Q 020768          250 AMGTGIDVSFDCAG--------FNKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       250 ~~~~~~d~vid~~g--------~~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      .....+|.++|+..        ....++.+.++|++||++++++.
T Consensus       109 ~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~  153 (213)
T TIGR03840       109 ADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL  153 (213)
T ss_pred             ccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence            01245899999653        13468899999999999777764

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.24  E-value=0.13  Score=44.73  Aligned_cols=83  Identities=20%  Similarity=0.171  Sum_probs=48.9

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH----HHHcCCCe-EEecCCC-cccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~----~~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~  253 (321)
                      ++.++||+|+ |++|...+..+...|.++++...++.++.+.    .+..+... .+..+-. ..+..+.+.+..+. .+
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   81 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEE-FG   81 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence            4679999998 9999999999999998544434555544322    22334322 2222221 22333333333332 34


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|.+.|.
T Consensus        82 ~id~vi~~ag~   92 (250)
T PRK08063         82 RLDVFVNNAAS   92 (250)
T ss_pred             CCCEEEECCCC
Confidence            68999998874

>PRK06484 short chain dehydrogenase; Validated

Probab=96.24  E-value=0.14  Score=49.96  Aligned_cols=82  Identities=28%  Similarity=0.378  Sum_probs=54.4

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH-HHHcCCCe-EEecCC-CcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~-~~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .++++||+|+ +++|...++.+...|+ +|+.++++.++.+. .++++... .+..+- +..+..+.+.++.+. .+++|
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~iD   81 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHRE-FGRID   81 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHH-hCCCC
Confidence            5789999998 9999999999999999 68888787776554 44565432 122211 223333444444332 35799


Q ss_pred             EEEEcCCC
Q 020768          257 VSFDCAGF  264 (321)
Q Consensus       257 ~vid~~g~  264 (321)
                      ++|.+.|.
T Consensus        82 ~li~nag~   89 (520)
T PRK06484         82 VLVNNAGV   89 (520)
T ss_pred             EEEECCCc
Confidence            99999874

>PRK08317 hypothetical protein; Provisional

Probab=96.22  E-value=0.082  Score=45.48  Aligned_cols=104  Identities=24%  Similarity=0.294  Sum_probs=68.8

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHHHHc--CCCeEEecCCCcccHHHHHHHHHHH
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKEL--GADNIVKVSTNLQDIAEEVEKIQKA  250 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~~~~--g~~~vi~~~~~~~~~~~~~~~~~~~  250 (321)
                      ++...++++++||-+|+|. |..+..+++..+ ...+++++.+++..+.+++.  .....+.+...  +..    ... .
T Consensus        12 ~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~--d~~----~~~-~   83 (241)
T PRK08317         12 FELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRG--DAD----GLP-F   83 (241)
T ss_pred             HHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEec--ccc----cCC-C
Confidence            4667889999999999966 888888988773 34799999999988888764  11111111110  100    000 0


Q ss_pred             hCCCccEEEEcC-----CC-HHHHHHHHHHcccCCEEEEEc
Q 020768          251 MGTGIDVSFDCA-----GF-NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       251 ~~~~~d~vid~~-----g~-~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      ....+|+|+...     .. ...+..+.++|+++|.+++..
T Consensus        84 ~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  124 (241)
T PRK08317         84 PDGSFDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD  124 (241)
T ss_pred             CCCCceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence            135688887532     22 347789999999999998875

>PRK00811 spermidine synthase; Provisional

Probab=96.21  E-value=0.035  Score=49.76  Aligned_cols=99  Identities=18%  Similarity=0.184  Sum_probs=65.1

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCC--------CeEEecCCCcccHHHHHHHHHHHh
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA--------DNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~--------~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      ...++||++|+|. |..+..+++..+...|.+++.+++-.+.+++.-.        +.-+.+.  ..|..+.+..    .
T Consensus        75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~--~~Da~~~l~~----~  147 (283)
T PRK00811         75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELV--IGDGIKFVAE----T  147 (283)
T ss_pred             CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEE--ECchHHHHhh----C
Confidence            4567999998755 6667777777677789999999998888876311        1101110  1233333322    2


Q ss_pred             CCCccEEEEcCCC----------HHHHHHHHHHcccCCEEEEEc
Q 020768          252 GTGIDVSFDCAGF----------NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       252 ~~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      ...+|+||-....          .+.++.+.+.|+++|.++.-.
T Consensus       148 ~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~~  191 (283)
T PRK00811        148 ENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQS  191 (283)
T ss_pred             CCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEeC
Confidence            4679999875422          245678889999999998754

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=96.21  E-value=0.14  Score=43.84  Aligned_cols=106  Identities=22%  Similarity=0.325  Sum_probs=73.8

Q ss_pred             cCCCCCCEEEEEcCChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768          177 ANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      ++.+...+||=+| ..+|+.++.+|..+. -.++++++.++++.+.++    +.|.+..+..-.. .+..+.+.+   ..
T Consensus        55 ~~~~~~k~iLEiG-T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~-gdal~~l~~---~~  129 (219)
T COG4122          55 ARLSGPKRILEIG-TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLG-GDALDVLSR---LL  129 (219)
T ss_pred             HHhcCCceEEEee-cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEec-CcHHHHHHh---cc
Confidence            4556778888777 456888888888876 347999999999888765    5676653332221 244444433   23


Q ss_pred             CCCccEEEEcCCC---HHHHHHHHHHcccCCEEEEEcCC
Q 020768          252 GTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       252 ~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      .+.||+||--..-   +..++.+++.|++||.++.=...
T Consensus       130 ~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~DNvl  168 (219)
T COG4122         130 DGSFDLVFIDADKADYPEYLERALPLLRPGGLIVADNVL  168 (219)
T ss_pred             CCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEeecc
Confidence            5779999864443   45799999999999999887744

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.20  E-value=0.044  Score=44.05  Aligned_cols=104  Identities=24%  Similarity=0.285  Sum_probs=66.2

Q ss_pred             HHHHcCC-CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHH-HHHcCCCeE-EecCCCcccHHHHHHHHHH
Q 020768          173 ACRRANI-GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGADNI-VKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       173 ~l~~~~~-~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~-~~~~g~~~v-i~~~~~~~~~~~~~~~~~~  249 (321)
                      +++.... ..+.+++|+|+|.+|...++.+...|...+.+++++.++.+. +++++...+ ...    .+..    +.  
T Consensus         9 a~~~~~~~~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~----~~~~----~~--   78 (155)
T cd01065           9 ALEEAGIELKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAY----LDLE----EL--   78 (155)
T ss_pred             HHHhhCCCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceee----cchh----hc--
Confidence            3444443 457889999999999999988888864478888888776554 555664310 011    1111    11  


Q ss_pred             HhCCCccEEEEcCCCHHH----HHHHHHHcccCCEEEEEcCCC
Q 020768          250 AMGTGIDVSFDCAGFNKT----MSTALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       250 ~~~~~~d~vid~~g~~~~----~~~~~~~l~~~G~~v~~g~~~  288 (321)
                        -.++|+|+.|++.+..    .......++++..++.+++..
T Consensus        79 --~~~~Dvvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~~  119 (155)
T cd01065          79 --LAEADLIINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYNP  119 (155)
T ss_pred             --cccCCEEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcCC
Confidence              2568999999987532    112234567888888887653

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=96.19  E-value=0.13  Score=43.92  Aligned_cols=102  Identities=20%  Similarity=0.134  Sum_probs=65.2

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHH
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      ++...++++++||-+|+|. |..+..+++..+  .+++++.+++..+.++    +.+...+.....   +..+.   +. 
T Consensus        71 ~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~~--~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~---d~~~~---~~-  140 (212)
T PRK00312         71 TELLELKPGDRVLEIGTGS-GYQAAVLAHLVR--RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHG---DGWKG---WP-  140 (212)
T ss_pred             HHhcCCCCCCEEEEECCCc-cHHHHHHHHHhC--EEEEEeCCHHHHHHHHHHHHHCCCCceEEEEC---CcccC---CC-
Confidence            4567889999999998754 555555666543  6999999987766554    345443211111   11110   00 


Q ss_pred             HhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcC
Q 020768          250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       250 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                       ....+|+|+....-......+.+.|+++|+++..-.
T Consensus       141 -~~~~fD~I~~~~~~~~~~~~l~~~L~~gG~lv~~~~  176 (212)
T PRK00312        141 -AYAPFDRILVTAAAPEIPRALLEQLKEGGILVAPVG  176 (212)
T ss_pred             -cCCCcCEEEEccCchhhhHHHHHhcCCCcEEEEEEc
Confidence             125699988766555667788899999999877643

>PRK12747 short chain dehydrogenase; Provisional

Probab=96.19  E-value=0.17  Score=44.04  Aligned_cols=108  Identities=17%  Similarity=0.183  Sum_probs=61.4

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEE-eCChhHHH-HHH---HcCCCe-EEecCC-CcccHHHHHHHHHHH--
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIV-DVDDYRLS-VAK---ELGADN-IVKVST-NLQDIAEEVEKIQKA--  250 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v-~~~~~~~~-~~~---~~g~~~-vi~~~~-~~~~~~~~~~~~~~~--  250 (321)
                      .+.+++|+|+ +++|...++.+...|++ |+.+ .++.++.+ ...   +.+... .+..+- +..+....+.++.+.  
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGAL-VAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCe-EEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            4689999998 99999999999999984 5554 34434332 222   223221 111111 111222222222211  


Q ss_pred             ---hCCCccEEEEcCCCHH-------------------------HHHHHHHHcccCCEEEEEcCCCC
Q 020768          251 ---MGTGIDVSFDCAGFNK-------------------------TMSTALSATRAGGKVCLVGMGHL  289 (321)
Q Consensus       251 ---~~~~~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~~  289 (321)
                         +..++|+++.+.|...                         ..+.++..++..|+++.+++...
T Consensus        82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~  148 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT  148 (252)
T ss_pred             hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccc
Confidence               1237999999988310                         12345566677799999986543

>PRK08628 short chain dehydrogenase; Provisional

Probab=96.19  E-value=0.041  Score=48.15  Aligned_cols=82  Identities=24%  Similarity=0.216  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH---cCCC-eEEecCC-CcccHHHHHHHHHHHhCCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE---LGAD-NIVKVST-NLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~---~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~~  254 (321)
                      .+.++||+|+ |++|...++.+...|++ ++++.+++++.+..++   .+.. ..+..+- +..+..+.+.++... .++
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   83 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGAI-PVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAK-FGR   83 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCc-EEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh-cCC
Confidence            4679999998 99999999888889995 6666676665544433   2322 1222211 112233333333322 357


Q ss_pred             ccEEEEcCCC
Q 020768          255 IDVSFDCAGF  264 (321)
Q Consensus       255 ~d~vid~~g~  264 (321)
                      +|++|.+.|.
T Consensus        84 id~vi~~ag~   93 (258)
T PRK08628         84 IDGLVNNAGV   93 (258)
T ss_pred             CCEEEECCcc
Confidence            9999999983

>PRK08703 short chain dehydrogenase; Provisional

Probab=96.18  E-value=0.059  Score=46.58  Aligned_cols=83  Identities=19%  Similarity=0.325  Sum_probs=51.8

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HH---cCC-C---eEEecCCC-cccHHHHHHHHHHH
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGA-D---NIVKVSTN-LQDIAEEVEKIQKA  250 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~---~g~-~---~vi~~~~~-~~~~~~~~~~~~~~  250 (321)
                      ++.+++|+|+ |++|...++.+...|. .|+++++++++.+.+ .+   .+. .   ...|..+. ..++.+...++...
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~   83 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA   83 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence            4679999998 9999999999988999 688888887665433 22   221 1   11222211 12333333344333


Q ss_pred             hCCCccEEEEcCCC
Q 020768          251 MGTGIDVSFDCAGF  264 (321)
Q Consensus       251 ~~~~~d~vid~~g~  264 (321)
                      ....+|.+|.+.|.
T Consensus        84 ~~~~id~vi~~ag~   97 (239)
T PRK08703         84 TQGKLDGIVHCAGY   97 (239)
T ss_pred             hCCCCCEEEEeccc
Confidence            22578999999984

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.16  E-value=0.094  Score=44.44  Aligned_cols=46  Identities=22%  Similarity=0.369  Sum_probs=38.4

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-HcCC
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGA  227 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~g~  227 (321)
                      .|.+++|.|.|.+|..+++.+...|+ .|++++.+.++.+.+. .+++
T Consensus        27 ~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~   73 (200)
T cd01075          27 EGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGA   73 (200)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCC
Confidence            57899999999999999999999999 6888888888766554 4464

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK07024 short chain dehydrogenase; Provisional

Probab=96.15  E-value=0.056  Score=47.38  Aligned_cols=81  Identities=21%  Similarity=0.181  Sum_probs=50.5

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-HcCCC-e--EEecCC-CcccHHHHHHHHHHHhCCCc
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGAD-N--IVKVST-NLQDIAEEVEKIQKAMGTGI  255 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~g~~-~--vi~~~~-~~~~~~~~~~~~~~~~~~~~  255 (321)
                      +.+++|+|+ |++|...+..+...|+ .|++++++.++.+.+. ++... .  .+..+- +.++..+.+.++.+. .+.+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~-~g~i   79 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAA-HGLP   79 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHh-CCCC
Confidence            468999998 9999999999888899 6888888877665443 33211 1  122211 122333333333322 3458


Q ss_pred             cEEEEcCCC
Q 020768          256 DVSFDCAGF  264 (321)
Q Consensus       256 d~vid~~g~  264 (321)
                      |+++.+.|.
T Consensus        80 d~lv~~ag~   88 (257)
T PRK07024         80 DVVIANAGI   88 (257)
T ss_pred             CEEEECCCc
Confidence            999998873

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=96.15  E-value=0.25  Score=43.07  Aligned_cols=82  Identities=15%  Similarity=0.266  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCC-eEEecCC-CcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGAD-NIVKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      .+.+++|+|+ |++|...+..+...|+ .|+.++++.++.+.+    ++.+.. ..+..+- +..+..+.+.++... .+
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~   87 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAE-HG   87 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh-cC
Confidence            5789999998 9999999988888899 688888876554322    233422 1222221 222333334443332 34


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      .+|.+|.+.|.
T Consensus        88 ~id~vi~~ag~   98 (256)
T PRK06124         88 RLDILVNNVGA   98 (256)
T ss_pred             CCCEEEECCCC
Confidence            68999999884

>PRK09291 short chain dehydrogenase; Provisional

Probab=96.15  E-value=0.083  Score=46.09  Aligned_cols=75  Identities=19%  Similarity=0.207  Sum_probs=47.3

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCCe-EEecCCCcccHHHHHHHHHHHhCCCc
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADN-IVKVSTNLQDIAEEVEKIQKAMGTGI  255 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~~-vi~~~~~~~~~~~~~~~~~~~~~~~~  255 (321)
                      +.++||+|+ |++|...++.+...|+ .|+++.++.++.+.+.    ..+... ++..+-  .+. +.+.+.   ...++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~--~~~-~~~~~~---~~~~i   74 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDL--TDA-IDRAQA---AEWDV   74 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeC--CCH-HHHHHH---hcCCC
Confidence            458999999 9999999999999998 5777777765544432    233221 111111  122 123222   13479


Q ss_pred             cEEEEcCC
Q 020768          256 DVSFDCAG  263 (321)
Q Consensus       256 d~vid~~g  263 (321)
                      |++|.+.|
T Consensus        75 d~vi~~ag   82 (257)
T PRK09291         75 DVLLNNAG   82 (257)
T ss_pred             CEEEECCC
Confidence            99999987

>PRK06701 short chain dehydrogenase; Provisional

Probab=96.14  E-value=0.2  Score=44.89  Aligned_cols=106  Identities=20%  Similarity=0.202  Sum_probs=61.4

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChh-HH----HHHHHcCCCe-EEecCCC-cccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY-RL----SVAKELGADN-IVKVSTN-LQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~-~~----~~~~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~  252 (321)
                      .+.++||+|+ |++|...+..+...|+ .|+.+.++.+ ..    +.++..+... .+..+-. ..+..+.+.++.+. .
T Consensus        45 ~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~-~  122 (290)
T PRK06701         45 KGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE-L  122 (290)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH-c
Confidence            4678999998 9999999988888899 5666655532 11    1222233322 2222211 22223333333322 3


Q ss_pred             CCccEEEEcCCCHH--------------------------HHHHHHHHcccCCEEEEEcCCC
Q 020768          253 TGIDVSFDCAGFNK--------------------------TMSTALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       253 ~~~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  288 (321)
                      +++|++|.+.|...                          ..+.+...++++|+++.++...
T Consensus       123 ~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~  184 (290)
T PRK06701        123 GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSIT  184 (290)
T ss_pred             CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence            57899999887410                          1233445556778999988643

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.11  E-value=0.037  Score=53.64  Aligned_cols=74  Identities=30%  Similarity=0.434  Sum_probs=53.4

Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccE
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      .+.+|++|+|+|.|..|++++.+++..|+ .|++.+.++++.+.++++|+.. +...    ...+   .+     ..+|+
T Consensus         8 ~~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~-~~~~----~~~~---~l-----~~~D~   73 (488)
T PRK03369          8 PLLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVAT-VSTS----DAVQ---QI-----ADYAL   73 (488)
T ss_pred             cccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEE-EcCc----chHh---Hh-----hcCCE
Confidence            34578999999999999999999999999 6888887766666677777743 2211    1111   11     24799


Q ss_pred             EEEcCCCH
Q 020768          258 SFDCAGFN  265 (321)
Q Consensus       258 vid~~g~~  265 (321)
                      |+.+.|-+
T Consensus        74 VV~SpGi~   81 (488)
T PRK03369         74 VVTSPGFR   81 (488)
T ss_pred             EEECCCCC
Confidence            99988865

>PRK06483 dihydromonapterin reductase; Provisional

Probab=96.11  E-value=0.062  Score=46.36  Aligned_cols=80  Identities=19%  Similarity=0.280  Sum_probs=50.2

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhH-HHHHHHcCCCeEEecCC-CcccHHHHHHHHHHHhCCCccEE
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYR-LSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~-~~~~~~~g~~~vi~~~~-~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      +.++||+|+ +++|...++.+...|+ .|+.+++++++ .+.+++.++. .+..+- +..+..+.+.++.+. .+++|++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~-~~~id~l   78 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQ-CIQADFSTNAGIMAFIDELKQH-TDGLRAI   78 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCE-EEEcCCCCHHHHHHHHHHHHhh-CCCccEE
Confidence            468999998 9999999998888999 57777766543 3344455543 222221 222333334443322 3469999


Q ss_pred             EEcCCC
Q 020768          259 FDCAGF  264 (321)
Q Consensus       259 id~~g~  264 (321)
                      +.+.|.
T Consensus        79 v~~ag~   84 (236)
T PRK06483         79 IHNASD   84 (236)
T ss_pred             EECCcc
Confidence            999874

>PRK06196 oxidoreductase; Provisional

Probab=96.11  E-value=0.054  Score=49.16  Aligned_cols=82  Identities=18%  Similarity=0.289  Sum_probs=51.1

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCeEEecCC-CcccHHHHHHHHHHHhCCCccE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~vi~~~~-~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      .+.+++|+|+ |++|..++..+...|+ .|+++.++.++.+.+ .++..-..+..+- +..+..+.+.++.+ ..+++|+
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~-~~~~iD~  102 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLD-SGRRIDI  102 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHh-cCCCCCE
Confidence            4679999999 9999999998888998 577777877665433 3332112222221 12222333333322 2357999


Q ss_pred             EEEcCCC
Q 020768          258 SFDCAGF  264 (321)
Q Consensus       258 vid~~g~  264 (321)
                      +|.+.|.
T Consensus       103 li~nAg~  109 (315)
T PRK06196        103 LINNAGV  109 (315)
T ss_pred             EEECCCC
Confidence            9999873

>PRK04457 spermidine synthase; Provisional

Probab=96.10  E-value=0.091  Score=46.54  Aligned_cols=97  Identities=16%  Similarity=0.167  Sum_probs=66.3

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHc-CCC----eEEecCCCcccHHHHHHHHHHHhCCC
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL-GAD----NIVKVSTNLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~-g~~----~vi~~~~~~~~~~~~~~~~~~~~~~~  254 (321)
                      .++.+||++|+|+ |.++..+++......+.+++.+++-.+.+++. +..    .+-...   .|..+.+.+    ....
T Consensus        65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~---~Da~~~l~~----~~~~  136 (262)
T PRK04457         65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIE---ADGAEYIAV----HRHS  136 (262)
T ss_pred             CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEE---CCHHHHHHh----CCCC
Confidence            4567899999865 77888888877555799999999999998863 321    111111   233333332    2457


Q ss_pred             ccEEEEcC--C--------CHHHHHHHHHHcccCCEEEEE
Q 020768          255 IDVSFDCA--G--------FNKTMSTALSATRAGGKVCLV  284 (321)
Q Consensus       255 ~d~vid~~--g--------~~~~~~~~~~~l~~~G~~v~~  284 (321)
                      +|+|+--.  +        ..+.++.+.+.|+++|.++..
T Consensus       137 yD~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvin  176 (262)
T PRK04457        137 TDVILVDGFDGEGIIDALCTQPFFDDCRNALSSDGIFVVN  176 (262)
T ss_pred             CCEEEEeCCCCCCCccccCcHHHHHHHHHhcCCCcEEEEE
Confidence            99887321  1        136788999999999999873

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.09  E-value=0.11  Score=42.38  Aligned_cols=107  Identities=21%  Similarity=0.241  Sum_probs=66.2

Q ss_pred             CEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcC
Q 020768          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  262 (321)
                      .+|.++|.|.+|...+.-+...|+ .|.+-++++++.+.+.+.|+...       .+..+...        ..|+||-|+
T Consensus         2 ~~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~-------~s~~e~~~--------~~dvvi~~v   65 (163)
T PF03446_consen    2 MKIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVA-------DSPAEAAE--------QADVVILCV   65 (163)
T ss_dssp             BEEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEE-------SSHHHHHH--------HBSEEEE-S
T ss_pred             CEEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhh-------hhhhhHhh--------cccceEeec
Confidence            368899999999999998888999 68889999999988887774322       12222221        258999999


Q ss_pred             CCHHHHHHHH------HHcccCCEEEEEcCCCCCccccchh-hhccceEE
Q 020768          263 GFNKTMSTAL------SATRAGGKVCLVGMGHLEMTVPLTP-AAARYLIY  305 (321)
Q Consensus       263 g~~~~~~~~~------~~l~~~G~~v~~g~~~~~~~~~~~~-~~~k~~~i  305 (321)
                      .+++.....+      ..+.++..++.++...+.....+.. +-.+++.+
T Consensus        66 ~~~~~v~~v~~~~~i~~~l~~g~iiid~sT~~p~~~~~~~~~~~~~g~~~  115 (163)
T PF03446_consen   66 PDDDAVEAVLFGENILAGLRPGKIIIDMSTISPETSRELAERLAAKGVRY  115 (163)
T ss_dssp             SSHHHHHHHHHCTTHGGGS-TTEEEEE-SS--HHHHHHHHHHHHHTTEEE
T ss_pred             ccchhhhhhhhhhHHhhccccceEEEecCCcchhhhhhhhhhhhhcccee
Confidence            9866555543      3455666777777655544444443 23445543

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PLN02366 spermidine synthase

Probab=96.09  E-value=0.057  Score=48.94  Aligned_cols=100  Identities=24%  Similarity=0.260  Sum_probs=65.2

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCC-------eEEecCCCcccHHHHHHHHHHHhC
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD-------NIVKVSTNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~-------~vi~~~~~~~~~~~~~~~~~~~~~  252 (321)
                      ...++||++|+|. |.++..+++.-+...+.+++-+++-.+.++++-..       .-+.+.  ..|..+.+++.   .+
T Consensus        90 ~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi--~~Da~~~l~~~---~~  163 (308)
T PLN02366         90 PNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLH--IGDGVEFLKNA---PE  163 (308)
T ss_pred             CCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEE--EChHHHHHhhc---cC
Confidence            4578999998865 55677788876666899999999888888773211       001100  12333333321   14


Q ss_pred             CCccEEEEcCCC----------HHHHHHHHHHcccCCEEEEEc
Q 020768          253 TGIDVSFDCAGF----------NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       253 ~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      ..+|+||--...          .+.++.+.+.|+++|.++.-+
T Consensus       164 ~~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~  206 (308)
T PLN02366        164 GTYDAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQA  206 (308)
T ss_pred             CCCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECc
Confidence            569999875433          245788899999999997654

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.09  E-value=0.022  Score=54.52  Aligned_cols=94  Identities=11%  Similarity=0.120  Sum_probs=62.8

Q ss_pred             HcCCCCCCEEE----EEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCe-EEecCCCcccHHHHHHHHHH
Q 020768          176 RANIGPETNVL----IMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN-IVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       176 ~~~~~~g~~vl----I~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~~~~~~~~  249 (321)
                      ..++++|+.+|    |+|+ |++|..++|+++..|+ .|+++...+++....+..+.+. +.+.  ...++.+.+..+  
T Consensus        28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~--~~~~~~~~l~~~--  102 (450)
T PRK08261         28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDA--TGITDPADLKAL--  102 (450)
T ss_pred             ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEEC--CCCCCHHHHHHH--
Confidence            35778999988    8876 9999999999999999 5777665555444334445553 3332  222333333322  


Q ss_pred             HhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC
Q 020768          250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL  289 (321)
Q Consensus       250 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  289 (321)
                                     -..+...++.|.++|+++.++....
T Consensus       103 ---------------~~~~~~~l~~l~~~griv~i~s~~~  127 (450)
T PRK08261        103 ---------------YEFFHPVLRSLAPCGRVVVLGRPPE  127 (450)
T ss_pred             ---------------HHHHHHHHHhccCCCEEEEEccccc
Confidence                           1456777888889999999986543

>PRK08589 short chain dehydrogenase; Validated

Probab=96.08  E-value=0.074  Score=47.13  Aligned_cols=82  Identities=22%  Similarity=0.334  Sum_probs=50.3

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHc---CCC-eEEecCC-CcccHHHHHHHHHHHhCCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL---GAD-NIVKVST-NLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~---g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~~  254 (321)
                      .+.++||+|+ +++|...++.+...|+ .|++++++++..+.++++   +.. ..+..+- +..+..+.+.++.+. .++
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~g~   82 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQ-FGR   82 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHH-cCC
Confidence            4779999998 9999999998888999 677777774333333333   322 1222211 122333334444332 356


Q ss_pred             ccEEEEcCCC
Q 020768          255 IDVSFDCAGF  264 (321)
Q Consensus       255 ~d~vid~~g~  264 (321)
                      +|++|.+.|.
T Consensus        83 id~li~~Ag~   92 (272)
T PRK08589         83 VDVLFNNAGV   92 (272)
T ss_pred             cCEEEECCCC
Confidence            8999999874

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=96.08  E-value=0.052  Score=50.85  Aligned_cols=93  Identities=24%  Similarity=0.313  Sum_probs=57.0

Q ss_pred             EEEEcCChhHHHHHHHHHHcCCC-eEEEEeCChhHHHHHHH--cCCC-eEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          185 VLIMGAGPIGLVTMLGARAFGAP-RIVIVDVDDYRLSVAKE--LGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       185 vlI~Gag~vG~~a~qla~~~g~~-~vv~v~~~~~~~~~~~~--~g~~-~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      |+|+|+|.+|..+++.+....-. .+++.+++.++.+.+.+  .+.. ..+..+-  .+.. .+.++.    .+.|+||+
T Consensus         1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~--~~~~-~l~~~~----~~~dvVin   73 (386)
T PF03435_consen    1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDV--NDPE-SLAELL----RGCDVVIN   73 (386)
T ss_dssp             EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--T--TTHH-HHHHHH----TTSSEEEE
T ss_pred             CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEec--CCHH-HHHHHH----hcCCEEEE
Confidence            68999999999999999877643 68889999998766543  2221 1111111  1222 244442    35699999


Q ss_pred             cCCCHHHHHHHHHHcccCCEEEEE
Q 020768          261 CAGFNKTMSTALSATRAGGKVCLV  284 (321)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~G~~v~~  284 (321)
                      |+|......-+-.++..+-.++..
T Consensus        74 ~~gp~~~~~v~~~~i~~g~~yvD~   97 (386)
T PF03435_consen   74 CAGPFFGEPVARACIEAGVHYVDT   97 (386)
T ss_dssp             -SSGGGHHHHHHHHHHHT-EEEES
T ss_pred             CCccchhHHHHHHHHHhCCCeecc
Confidence            999754544555666777777773

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences

Probab=96.05  E-value=0.045  Score=49.22  Aligned_cols=146  Identities=19%  Similarity=0.312  Sum_probs=80.2

Q ss_pred             cCCcEEECCCCCChhhhccchhhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH
Q 020768          145 PADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE  224 (321)
Q Consensus       145 ~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~  224 (321)
                      +.+..+.+.+++.|-....-.+.. .+..++.. .++|++||=+|+|. |.+++..++ +|++.|+++|.++...+.+++
T Consensus       127 ~~~~~I~idPg~AFGTG~H~TT~l-cl~~l~~~-~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~DiDp~Av~~a~~  202 (295)
T PF06325_consen  127 PDEIVIEIDPGMAFGTGHHPTTRL-CLELLEKY-VKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAIDIDPLAVEAARE  202 (295)
T ss_dssp             TTSEEEEESTTSSS-SSHCHHHHH-HHHHHHHH-SSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEESSCHHHHHHHH
T ss_pred             CCcEEEEECCCCcccCCCCHHHHH-HHHHHHHh-ccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEecCCHHHHHHHHH
Confidence            445667777777665544221111 12333332 57889998888743 555544444 599899999999876665542


Q ss_pred             ----cCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHH---HHHHHHHHcccCCEEEEEcCCCCCccccchh
Q 020768          225 ----LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNK---TMSTALSATRAGGKVCLVGMGHLEMTVPLTP  297 (321)
Q Consensus       225 ----~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~---~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~  297 (321)
                          -|...-+.... ..+.          ....+|+|+-..-.+-   ..+.+.+.++++|.+++-|...... -.+..
T Consensus       203 N~~~N~~~~~~~v~~-~~~~----------~~~~~dlvvANI~~~vL~~l~~~~~~~l~~~G~lIlSGIl~~~~-~~v~~  270 (295)
T PF06325_consen  203 NAELNGVEDRIEVSL-SEDL----------VEGKFDLVVANILADVLLELAPDIASLLKPGGYLILSGILEEQE-DEVIE  270 (295)
T ss_dssp             HHHHTT-TTCEEESC-TSCT----------CCS-EEEEEEES-HHHHHHHHHHCHHHEEEEEEEEEEEEEGGGH-HHHHH
T ss_pred             HHHHcCCCeeEEEEE-eccc----------ccccCCEEEECCCHHHHHHHHHHHHHhhCCCCEEEEccccHHHH-HHHHH
Confidence                33332221111 1111          1267899997766532   3345567899999999999764432 22233


Q ss_pred             hhccceEEE
Q 020768          298 AAARYLIYS  306 (321)
Q Consensus       298 ~~~k~~~i~  306 (321)
                      .+.++.++.
T Consensus       271 a~~~g~~~~  279 (295)
T PF06325_consen  271 AYKQGFELV  279 (295)
T ss_dssp             HHHTTEEEE
T ss_pred             HHHCCCEEE
Confidence            333455554

Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=96.05  E-value=0.078  Score=48.25  Aligned_cols=81  Identities=21%  Similarity=0.347  Sum_probs=50.3

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCC---C-eEEecCC-CcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGA---D-NIVKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~---~-~vi~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      .+.+++|+|+ |++|...++.+...|+ .|++++++.++.+.+ +++..   . ..+..+- +..+..+.+.++.+ ...
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~~~   82 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRA-LGK   82 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHH-hCC
Confidence            4678999998 9999999998888898 677777777665433 33321   1 1222111 11222223333322 245


Q ss_pred             CccEEEEcCC
Q 020768          254 GIDVSFDCAG  263 (321)
Q Consensus       254 ~~d~vid~~g  263 (321)
                      ++|++|++.|
T Consensus        83 ~iD~li~nAg   92 (322)
T PRK07453         83 PLDALVCNAA   92 (322)
T ss_pred             CccEEEECCc
Confidence            6999999987

>PRK07478 short chain dehydrogenase; Provisional

Probab=96.03  E-value=0.089  Score=45.92  Aligned_cols=82  Identities=20%  Similarity=0.191  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCe-EEecCC-CcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      .+.+++|+|+ +++|...+..+...|+ .|+.+++++++.+.+    ++.+... .+..+- +..+..+.+.++.+. .+
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   82 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVER-FG   82 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh-cC
Confidence            3678999998 9999999998888999 577777777665433    2233322 222221 122233333433332 34


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      .+|++|.+.|.
T Consensus        83 ~id~li~~ag~   93 (254)
T PRK07478         83 GLDIAFNNAGT   93 (254)
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>PLN02780 ketoreductase/ oxidoreductase

Probab=96.03  E-value=0.055  Score=49.40  Aligned_cols=80  Identities=23%  Similarity=0.318  Sum_probs=50.2

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-Hc----CCCe----EEecCCCcccHHHHHHHHHHH
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-EL----GADN----IVKVSTNLQDIAEEVEKIQKA  250 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~----g~~~----vi~~~~~~~~~~~~~~~~~~~  250 (321)
                      .|.+++|+|+ +++|...+..+...|+ .|+.+++++++.+.+. ++    +...    ..|..+   +..+...++.+.
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~---~~~~~~~~l~~~  127 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG---DIDEGVKRIKET  127 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC---CcHHHHHHHHHH
Confidence            5889999999 9999998888888899 5888888887765432 22    2111    123322   222333333322


Q ss_pred             -hCCCccEEEEcCCC
Q 020768          251 -MGTGIDVSFDCAGF  264 (321)
Q Consensus       251 -~~~~~d~vid~~g~  264 (321)
                       .+..+|++++++|.
T Consensus       128 ~~~~didilVnnAG~  142 (320)
T PLN02780        128 IEGLDVGVLINNVGV  142 (320)
T ss_pred             hcCCCccEEEEecCc
Confidence             23346799998873

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.02  E-value=0.13  Score=40.83  Aligned_cols=95  Identities=20%  Similarity=0.262  Sum_probs=56.9

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh-------------------hH----HHHHHHcCCCeEE-ecCCCccc
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-------------------YR----LSVAKELGADNIV-KVSTNLQD  239 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~-------------------~~----~~~~~~~g~~~vi-~~~~~~~~  239 (321)
                      +|+|.|+|++|...+..+...|...+..+|.+.                   .|    .+.++++....-+ .+.... +
T Consensus         1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~-~   79 (143)
T cd01483           1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGI-S   79 (143)
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeec-C
Confidence            589999999999999999999998888886541                   11    2223344432211 111111 1


Q ss_pred             HHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEE
Q 020768          240 IAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV  284 (321)
Q Consensus       240 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  284 (321)
                      .. ...+    .-.++|+||+|..+......+.+.++..+.-+..
T Consensus        80 ~~-~~~~----~~~~~diVi~~~d~~~~~~~l~~~~~~~~i~~i~  119 (143)
T cd01483          80 ED-NLDD----FLDGVDLVIDAIDNIAVRRALNRACKELGIPVID  119 (143)
T ss_pred             hh-hHHH----HhcCCCEEEECCCCHHHHHHHHHHHHHcCCCEEE
Confidence            01 1111    1357999999999866555566666666644333

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=96.02  E-value=0.22  Score=43.75  Aligned_cols=106  Identities=17%  Similarity=0.198  Sum_probs=61.3

Q ss_pred             CCCEEEEEcC---ChhHHHHHHHHHHcCCCeEEEEeCC------hhHHHHHHHcC-CCeEEecCC-CcccHHHHHHHHHH
Q 020768          181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVD------DYRLSVAKELG-ADNIVKVST-NLQDIAEEVEKIQK  249 (321)
Q Consensus       181 ~g~~vlI~Ga---g~vG~~a~qla~~~g~~~vv~v~~~------~~~~~~~~~~g-~~~vi~~~~-~~~~~~~~~~~~~~  249 (321)
                      .|++++|+|+   +++|...+..+...|++ |+.+..+      .+..+.+++.+ ....+..+- +.++..+.+.++.+
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   83 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGAE-LGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ   83 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCCE-EEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence            4688999996   48999999988889994 5555332      12222222222 112222221 22233333344333


Q ss_pred             HhCCCccEEEEcCCCH-------H----------------------HHHHHHHHcccCCEEEEEcCCC
Q 020768          250 AMGTGIDVSFDCAGFN-------K----------------------TMSTALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       250 ~~~~~~d~vid~~g~~-------~----------------------~~~~~~~~l~~~G~~v~~g~~~  288 (321)
                      . .+++|+++++.|..       .                      ..+.++..++.+|+++.++...
T Consensus        84 ~-~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~  150 (258)
T PRK07370         84 K-WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLG  150 (258)
T ss_pred             H-cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence            2 35799999998731       0                      1345666777789999887543

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=96.00  E-value=0.089  Score=45.94  Aligned_cols=82  Identities=20%  Similarity=0.304  Sum_probs=51.0

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCe-EEecCCC-cccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~  253 (321)
                      .+.++||+|+ |++|...++.+...|+ .|+.+++++++.+.+    ++.|... .+..+-. ..+..+.+.++.. ..+
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~   86 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEA-EIG   86 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHH-hcC
Confidence            4789999998 9999999998888999 577787776654432    2223221 1211111 2233333333322 245


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|.+.|.
T Consensus        87 ~~d~li~~ag~   97 (255)
T PRK07523         87 PIDILVNNAGM   97 (255)
T ss_pred             CCCEEEECCCC
Confidence            79999999985

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=96.00  E-value=0.07  Score=46.32  Aligned_cols=104  Identities=24%  Similarity=0.339  Sum_probs=73.1

Q ss_pred             HHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHH
Q 020768          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKI  247 (321)
Q Consensus       173 ~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~  247 (321)
                      .+.++++.||++|+=.|.|. |.+++.+|++.|. ..|+..+..++..+.++    ++|....+....  .|..+..   
T Consensus        86 I~~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~--~Dv~~~~---  159 (256)
T COG2519          86 IVARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKL--GDVREGI---  159 (256)
T ss_pred             HHHHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEe--ccccccc---
Confidence            35678999999998877644 8888888987765 47999998888777664    345544322211  2322221   


Q ss_pred             HHHhCCCccEEEEcCCCH-HHHHHHHHHcccCCEEEEEc
Q 020768          248 QKAMGTGIDVSFDCAGFN-KTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       248 ~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g  285 (321)
                         ....+|.+|--...+ +.++.+.+.|+++|+++++.
T Consensus       160 ---~~~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~  195 (256)
T COG2519         160 ---DEEDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYS  195 (256)
T ss_pred             ---cccccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEc
Confidence               134788887666654 67889999999999999987

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=95.99  E-value=0.08  Score=43.72  Aligned_cols=95  Identities=16%  Similarity=0.268  Sum_probs=62.5

Q ss_pred             EEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcC
Q 020768          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (321)
Q Consensus       184 ~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  262 (321)
                      +|.|+|| |-+|...++-|+..|. .|.++.++++|....+..-+   +.  .+--+.......     -.|+|+||++.
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~~i---~q--~Difd~~~~a~~-----l~g~DaVIsA~   70 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGVTI---LQ--KDIFDLTSLASD-----LAGHDAVISAF   70 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhcccccccee---ec--ccccChhhhHhh-----hcCCceEEEec
Confidence            5789999 9999999999999999 58888888888754322111   11  111111111111     36899999988


Q ss_pred             CCH--H-------HHHHHHHHcccC--CEEEEEcCCCC
Q 020768          263 GFN--K-------TMSTALSATRAG--GKVCLVGMGHL  289 (321)
Q Consensus       263 g~~--~-------~~~~~~~~l~~~--G~~v~~g~~~~  289 (321)
                      |..  .       ..+.++..|+.-  -|++.+|..++
T Consensus        71 ~~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAGS  108 (211)
T COG2910          71 GAGASDNDELHSKSIEALIEALKGAGVPRLLVVGGAGS  108 (211)
T ss_pred             cCCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCccc
Confidence            864  1       244567777763  48999986543

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.98  E-value=0.23  Score=43.02  Aligned_cols=107  Identities=16%  Similarity=0.154  Sum_probs=61.7

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHH----HHHHHcCCCe-EEecCC-CcccHHHHHHHHHHHhCCC
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRL----SVAKELGADN-IVKVST-NLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~----~~~~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~  254 (321)
                      +.++||+|+ |++|...+..+...|++.++...++.++.    ..+++.+... .+..+- +..+..+.+.++.+. ..+
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   84 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDR-YGV   84 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHH-cCC
Confidence            578999998 99999998888889995334333333222    2223333321 222211 112222333333332 357


Q ss_pred             ccEEEEcCCC----------HH---------------HHHHHHHHcccCCEEEEEcCCCC
Q 020768          255 IDVSFDCAGF----------NK---------------TMSTALSATRAGGKVCLVGMGHL  289 (321)
Q Consensus       255 ~d~vid~~g~----------~~---------------~~~~~~~~l~~~G~~v~~g~~~~  289 (321)
                      +|++|.+.|.          .+               ..+.+.+.++..|+++.++....
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~  144 (252)
T PRK06077         85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG  144 (252)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc
Confidence            8999999983          11               13345566677899999986543

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=95.98  E-value=0.029  Score=56.24  Aligned_cols=77  Identities=22%  Similarity=0.294  Sum_probs=53.7

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChh---------------------HHHHHHHcCCCeEEecCCCccc
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDY---------------------RLSVAKELGADNIVKVSTNLQD  239 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~---------------------~~~~~~~~g~~~vi~~~~~~~~  239 (321)
                      .+++|+|+|+|+.|+.++..++..|.+ |.+.+..+.                     +.++++++|++...+..-. .+
T Consensus       309 ~~kkVaIIG~GpaGl~aA~~L~~~G~~-Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~-~~  386 (639)
T PRK12809        309 RSEKVAVIGAGPAGLGCADILARAGVQ-VDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIG-RD  386 (639)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHcCCc-EEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccC-Cc
Confidence            489999999999999999999999994 666765542                     4567788887655442211 11


Q ss_pred             HHHHHHHHHHHhCCCccEEEEcCCCH
Q 020768          240 IAEEVEKIQKAMGTGIDVSFDCAGFN  265 (321)
Q Consensus       240 ~~~~~~~~~~~~~~~~d~vid~~g~~  265 (321)
                      .  .+.++    ..++|.||.++|..
T Consensus       387 ~--~~~~l----~~~~DaV~latGa~  406 (639)
T PRK12809        387 I--TFSDL----TSEYDAVFIGVGTY  406 (639)
T ss_pred             C--CHHHH----HhcCCEEEEeCCCC
Confidence            1  11222    24689999999974

>PRK06194 hypothetical protein; Provisional

Probab=95.97  E-value=0.097  Score=46.59  Aligned_cols=82  Identities=24%  Similarity=0.322  Sum_probs=50.2

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHc---CCCe-EEecCCC-cccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GADN-IVKVSTN-LQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~---g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~  253 (321)
                      .+.++||+|+ |++|...+..+...|+ .|++++++.++.+.. .++   +... .+..+-. ..+..+.+..+.+ ..+
T Consensus         5 ~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~g   82 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALE-RFG   82 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH-HcC
Confidence            3678999998 9999999998888998 577777776554332 222   3321 1222211 1223333333322 235


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|.+.|.
T Consensus        83 ~id~vi~~Ag~   93 (287)
T PRK06194         83 AVHLLFNNAGV   93 (287)
T ss_pred             CCCEEEECCCC
Confidence            78999999885

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=95.97  E-value=0.028  Score=50.40  Aligned_cols=76  Identities=14%  Similarity=0.136  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCe-EEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADN-IVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~-vi~~~~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      .+.+++|+|+|+.+.+++..+..+|++.+.++.++.+|.+.+ ++++... +....     ..+.+...    -..+|+|
T Consensus       124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~-----~~~~~~~~----~~~~DiV  194 (282)
T TIGR01809       124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE-----GDSGGLAI----EKAAEVL  194 (282)
T ss_pred             CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc-----chhhhhhc----ccCCCEE
Confidence            578999999999999999999999998899999988776644 4444211 11111     00111111    2468999


Q ss_pred             EEcCCCH
Q 020768          259 FDCAGFN  265 (321)
Q Consensus       259 id~~g~~  265 (321)
                      |+|++..
T Consensus       195 InaTp~g  201 (282)
T TIGR01809       195 VSTVPAD  201 (282)
T ss_pred             EECCCCC
Confidence            9998764

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK07454 short chain dehydrogenase; Provisional

Probab=95.97  E-value=0.11  Score=44.84  Aligned_cols=83  Identities=23%  Similarity=0.250  Sum_probs=51.8

Q ss_pred             CCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCCe-EEecCC-CcccHHHHHHHHHHHhC
Q 020768          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADN-IVKVST-NLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       180 ~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~  252 (321)
                      ..+.+++|+|+ |++|..++..+...|. .|+++++++++.+.+.    +.+... .+..+- +.++..+.+..+.+. .
T Consensus         4 ~~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   81 (241)
T PRK07454          4 NSMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQ-F   81 (241)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHH-c
Confidence            34578999998 9999999999998998 6888888776554332    222221 222221 122333333333322 3


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      +++|+++.+.|.
T Consensus        82 ~~id~lv~~ag~   93 (241)
T PRK07454         82 GCPDVLINNAGM   93 (241)
T ss_pred             CCCCEEEECCCc
Confidence            569999999884

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.97  E-value=0.18  Score=42.92  Aligned_cols=93  Identities=17%  Similarity=0.128  Sum_probs=60.8

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChh-HHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDY-RLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~-~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      .|.+|||+|+|.+|..-++.+...|+ .|.+++.... ..+.+.+.|--..+.   +  ++..  ..     -.++|+||
T Consensus         8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~~---~--~~~~--~d-----l~~~~lVi   74 (205)
T TIGR01470         8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWLA---R--CFDA--DI-----LEGAFLVI   74 (205)
T ss_pred             CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEEe---C--CCCH--HH-----hCCcEEEE
Confidence            46799999999999999999999999 5666655432 223333333111111   1  1111  01     14689999


Q ss_pred             EcCCCHHHHHHHHHHcccCCEEEEEcC
Q 020768          260 DCAGFNKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       260 d~~g~~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      -+++.++.-..+....+..|.++.+..
T Consensus        75 ~at~d~~ln~~i~~~a~~~~ilvn~~d  101 (205)
T TIGR01470        75 AATDDEELNRRVAHAARARGVPVNVVD  101 (205)
T ss_pred             ECCCCHHHHHHHHHHHHHcCCEEEECC
Confidence            999987666677777778888776653

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.96  E-value=0.071  Score=46.35  Aligned_cols=82  Identities=18%  Similarity=0.220  Sum_probs=47.9

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH-HHHcCCCe-EEecCC-CcccHHHHHHHHHHHhCCCccE
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~-~~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      +.++||+|+ |++|...+..+...|++.++...++.++.+. ..+++... .+..+- +..+..+.+.+..+..+.++|+
T Consensus         5 ~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~   84 (253)
T PRK08642          5 EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPITT   84 (253)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeE
Confidence            568999998 9999999998888999533333444444333 33444221 221111 1223333444443333445999


Q ss_pred             EEEcCC
Q 020768          258 SFDCAG  263 (321)
Q Consensus       258 vid~~g  263 (321)
                      +|.+.|
T Consensus        85 li~~ag   90 (253)
T PRK08642         85 VVNNAL   90 (253)
T ss_pred             EEECCC
Confidence            999876

>PRK05854 short chain dehydrogenase; Provisional

Probab=95.96  E-value=0.099  Score=47.48  Aligned_cols=82  Identities=20%  Similarity=0.264  Sum_probs=49.9

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHc----C-CC-eEEecCC-CcccHHHHHHHHHHHh
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL----G-AD-NIVKVST-NLQDIAEEVEKIQKAM  251 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~----g-~~-~vi~~~~-~~~~~~~~~~~~~~~~  251 (321)
                      .|.+++|+|+ +++|..++..+...|+ .|+.+.++.++.+.+ +++    + .. ..+..+- +..+..+...++.+ .
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~-~   90 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA-E   90 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH-h
Confidence            3689999999 9999999998888998 577777776654432 222    1 11 1222221 12222333333322 2


Q ss_pred             CCCccEEEEcCCC
Q 020768          252 GTGIDVSFDCAGF  264 (321)
Q Consensus       252 ~~~~d~vid~~g~  264 (321)
                      .+.+|++|.+.|.
T Consensus        91 ~~~iD~li~nAG~  103 (313)
T PRK05854         91 GRPIHLLINNAGV  103 (313)
T ss_pred             CCCccEEEECCcc
Confidence            4579999998874

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=95.95  E-value=0.1  Score=45.73  Aligned_cols=79  Identities=30%  Similarity=0.301  Sum_probs=49.4

Q ss_pred             EEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HH---cCCCeEEecCC-CcccHHHHHHHHHHHhCCCccE
Q 020768          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       184 ~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~---~g~~~vi~~~~-~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      ++||+|+ +++|...++.+...|+ .|+.+++++++.+.+ .+   .+-...+..+- +.++..+.+.++.+. .+++|+
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~-~g~id~   79 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWEL-LGGIDA   79 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHh-cCCCCE
Confidence            6899998 9999999998888999 577788877664433 22   23222222221 222333334443322 357999


Q ss_pred             EEEcCCC
Q 020768          258 SFDCAGF  264 (321)
Q Consensus       258 vid~~g~  264 (321)
                      +|.+.|.
T Consensus        80 li~naG~   86 (259)
T PRK08340         80 LVWNAGN   86 (259)
T ss_pred             EEECCCC
Confidence            9999884

>PRK08643 acetoin reductase; Validated

Probab=95.91  E-value=0.1  Score=45.51  Aligned_cols=81  Identities=21%  Similarity=0.281  Sum_probs=49.9

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HH---cCCCe-EEecCCC-cccHHHHHHHHHHHhCCC
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGADN-IVKVSTN-LQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~---~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~~  254 (321)
                      ++++||+|+ |++|...++.+...|+ .|+.++++.++.+.+ .+   .+... .+..+-. .....+.+.++.+. .++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~   79 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDT-FGD   79 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-cCC
Confidence            568999998 9999999999988998 688887776654433 22   23221 1221111 12223333333322 357


Q ss_pred             ccEEEEcCCC
Q 020768          255 IDVSFDCAGF  264 (321)
Q Consensus       255 ~d~vid~~g~  264 (321)
                      +|++|.+.|.
T Consensus        80 id~vi~~ag~   89 (256)
T PRK08643         80 LNVVVNNAGV   89 (256)
T ss_pred             CCEEEECCCC
Confidence            9999999874

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=95.90  E-value=0.23  Score=43.16  Aligned_cols=77  Identities=18%  Similarity=0.232  Sum_probs=47.4

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCC-eEEecCC-CcccHHHHHHHHHHHhCCCccE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      .++++||+|+ |++|...+..+...|. .+++++++.     ....+.. ..+..+- +..++.+.+.++.+ ..+.+|+
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id~   79 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSDAAAVAQVCQRLLA-ETGPLDV   79 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCCHHHHHHHHHHHHH-HcCCCCE
Confidence            4678999998 9999999998888998 577776655     1222221 1222111 12233333333332 2356899


Q ss_pred             EEEcCCC
Q 020768          258 SFDCAGF  264 (321)
Q Consensus       258 vid~~g~  264 (321)
                      +|.+.|.
T Consensus        80 vi~~ag~   86 (252)
T PRK08220         80 LVNAAGI   86 (252)
T ss_pred             EEECCCc
Confidence            9999885

>TIGR00417 speE spermidine synthase

Probab=95.90  E-value=0.16  Score=45.24  Aligned_cols=99  Identities=16%  Similarity=0.160  Sum_probs=62.2

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCC-------eEEecCCCcccHHHHHHHHHHHhC
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD-------NIVKVSTNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~-------~vi~~~~~~~~~~~~~~~~~~~~~  252 (321)
                      ..+++||++|+|. |..+..+++......+.+++.+++-.+.++++-..       .-++..  ..|..+.+++    ..
T Consensus        71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~--~~D~~~~l~~----~~  143 (270)
T TIGR00417        71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQ--IDDGFKFLAD----TE  143 (270)
T ss_pred             CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEE--ECchHHHHHh----CC
Confidence            3456999998855 44555666666566799999998887777653110       001110  1233333322    24


Q ss_pred             CCccEEEEcCC----------CHHHHHHHHHHcccCCEEEEEc
Q 020768          253 TGIDVSFDCAG----------FNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       253 ~~~d~vid~~g----------~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      ..+|+||-...          ..+.++.+.+.|+++|.++...
T Consensus       144 ~~yDvIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG~lv~~~  186 (270)
T TIGR00417       144 NTFDVIIVDSTDPVGPAETLFTKEFYELLKKALNEDGIFVAQS  186 (270)
T ss_pred             CCccEEEEeCCCCCCcccchhHHHHHHHHHHHhCCCcEEEEcC
Confidence            67999886433          2345678899999999999874

the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.

>PRK07063 short chain dehydrogenase; Provisional

Probab=95.89  E-value=0.1  Score=45.71  Aligned_cols=82  Identities=24%  Similarity=0.271  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHc-----CCC-eEEecCC-CcccHHHHHHHHHHHh
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL-----GAD-NIVKVST-NLQDIAEEVEKIQKAM  251 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~-----g~~-~vi~~~~-~~~~~~~~~~~~~~~~  251 (321)
                      .+.+++|+|+ +++|..+++.+...|+ .|+.+++++++.+.+ +++     +.. ..+..+- +..+..+.+.++.+. 
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-   83 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA-   83 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH-
Confidence            4678999998 9999999999999999 577777776655433 222     211 1222111 122333334443332 


Q ss_pred             CCCccEEEEcCCC
Q 020768          252 GTGIDVSFDCAGF  264 (321)
Q Consensus       252 ~~~~d~vid~~g~  264 (321)
                      .+++|++|.+.|.
T Consensus        84 ~g~id~li~~ag~   96 (260)
T PRK07063         84 FGPLDVLVNNAGI   96 (260)
T ss_pred             hCCCcEEEECCCc
Confidence            3579999999884

>PRK12746 short chain dehydrogenase; Provisional

Probab=95.87  E-value=0.19  Score=43.79  Aligned_cols=83  Identities=19%  Similarity=0.348  Sum_probs=47.6

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEE-EeCChhHHH-HHHHc---CCCe-EEecCC-CcccHHHHHHHHHHHh-
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVI-VDVDDYRLS-VAKEL---GADN-IVKVST-NLQDIAEEVEKIQKAM-  251 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~-v~~~~~~~~-~~~~~---g~~~-vi~~~~-~~~~~~~~~~~~~~~~-  251 (321)
                      .+.+++|+|+ |++|...++.+...|.+ +++ ..++.++.+ ...++   +... .+..+- +..+..+.++++.+.. 
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~G~~-v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~   83 (254)
T PRK12746          5 DGKVALVTGASRGIGRAIAMRLANDGAL-VAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ   83 (254)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence            3578999998 99999999988888984 544 455554433 22222   2221 222221 1223333333332221 


Q ss_pred             ----CCCccEEEEcCCC
Q 020768          252 ----GTGIDVSFDCAGF  264 (321)
Q Consensus       252 ----~~~~d~vid~~g~  264 (321)
                          ..++|++|.+.|.
T Consensus        84 ~~~~~~~id~vi~~ag~  100 (254)
T PRK12746         84 IRVGTSEIDILVNNAGI  100 (254)
T ss_pred             cccCCCCccEEEECCCC
Confidence                1468999998875

>PRK07340 ornithine cyclodeaminase; Validated

Probab=95.85  E-value=0.095  Score=47.47  Aligned_cols=108  Identities=16%  Similarity=0.119  Sum_probs=72.9

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHH-cCCCeEEEEeCChhHHH-HHHHcCCC--eEEecCCCcccHHHHHHHHHH
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARA-FGAPRIVIVDVDDYRLS-VAKELGAD--NIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~-~g~~~vv~v~~~~~~~~-~~~~~g~~--~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      .+...-....+++|+|+|..|.+.+..+.. .+.+.+.+.+++.++.+ +++++...  .+. .    .+..+.+     
T Consensus       117 ~~~La~~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~----~~~~~av-----  186 (304)
T PRK07340        117 ARTLAPAPPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P----LDGEAIP-----  186 (304)
T ss_pred             HHHhCCCCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E----CCHHHHh-----
Confidence            344444567899999999999998888864 68778888888887755 44555321  111 1    1222222     


Q ss_pred             HhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-Cccccch
Q 020768          250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLT  296 (321)
Q Consensus       250 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~  296 (321)
                         .+.|+|+.|+++...+-..  .+++|-++..+|...+ ..++|..
T Consensus       187 ---~~aDiVitaT~s~~Pl~~~--~~~~g~hi~~iGs~~p~~~El~~~  229 (304)
T PRK07340        187 ---EAVDLVVTATTSRTPVYPE--AARAGRLVVAVGAFTPDMAELAPR  229 (304)
T ss_pred             ---hcCCEEEEccCCCCceeCc--cCCCCCEEEecCCCCCCcccCCHH
Confidence               3689999999886543333  3799999999996644 4677765

>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot

Probab=95.85  E-value=0.17  Score=38.59  Aligned_cols=89  Identities=24%  Similarity=0.256  Sum_probs=60.8

Q ss_pred             EEEEEcCChhHHHHHHHHHHc--CCCeEEEEeCChhHHHH-HHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          184 NVLIMGAGPIGLVTMLGARAF--GAPRIVIVDVDDYRLSV-AKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~--g~~~vv~v~~~~~~~~~-~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      ++.|+|+|..|.....-++..  +.+.+.+++.++++.+. .+++|.. .+  .    ++.+.+.      ...+|+|+.
T Consensus         2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~-~~--~----~~~~ll~------~~~~D~V~I   68 (120)
T PF01408_consen    2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIP-VY--T----DLEELLA------DEDVDAVII   68 (120)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSE-EE--S----SHHHHHH------HTTESEEEE
T ss_pred             EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhccc-ch--h----HHHHHHH------hhcCCEEEE
Confidence            588999999998887666655  44334456777776664 5678876 22  1    2222222      247999999


Q ss_pred             cCCCHHHHHHHHHHcccCCEEEEEcC
Q 020768          261 CAGFNKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      ++....+.+.+..++..|- -+++--
T Consensus        69 ~tp~~~h~~~~~~~l~~g~-~v~~EK   93 (120)
T PF01408_consen   69 ATPPSSHAEIAKKALEAGK-HVLVEK   93 (120)
T ss_dssp             ESSGGGHHHHHHHHHHTTS-EEEEES
T ss_pred             ecCCcchHHHHHHHHHcCC-EEEEEc
Confidence            9999888888888888776 445543

GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....

>PRK05875 short chain dehydrogenase; Provisional

Probab=95.84  E-value=0.12  Score=45.76  Aligned_cols=82  Identities=22%  Similarity=0.300  Sum_probs=50.0

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcC-----CC-eEEecCCC-cccHHHHHHHHHHHh
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELG-----AD-NIVKVSTN-LQDIAEEVEKIQKAM  251 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g-----~~-~vi~~~~~-~~~~~~~~~~~~~~~  251 (321)
                      ++.++||+|+ |++|...++.+...|+ .|+.++++.++.+.. +++.     .. .++..+-. ..+..+.+.+..+ .
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~   83 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATA-W   83 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHH-H
Confidence            3689999998 9999999999999999 678787776554322 2221     11 12211111 1222233333322 2


Q ss_pred             CCCccEEEEcCCC
Q 020768          252 GTGIDVSFDCAGF  264 (321)
Q Consensus       252 ~~~~d~vid~~g~  264 (321)
                      .+++|++|.+.|.
T Consensus        84 ~~~~d~li~~ag~   96 (276)
T PRK05875         84 HGRLHGVVHCAGG   96 (276)
T ss_pred             cCCCCEEEECCCc
Confidence            3578999999873

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.84  E-value=0.073  Score=47.31  Aligned_cols=108  Identities=20%  Similarity=0.289  Sum_probs=67.5

Q ss_pred             CCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChh----HHHHHHHcC-CC-eEEecCCCcccHHHHHHHHHHHhC
Q 020768          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY----RLSVAKELG-AD-NIVKVSTNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       180 ~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~----~~~~~~~~g-~~-~vi~~~~~~~~~~~~~~~~~~~~~  252 (321)
                      -.|+.|||+|+ +++|.+.++-...+|+ +++..|.+++    -.+..++.| +. ...|.+ +.++..+...++.+. -
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis-~~eei~~~a~~Vk~e-~  112 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDIS-DREEIYRLAKKVKKE-V  112 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCC-CHHHHHHHHHHHHHh-c
Confidence            36899999988 8999888777777888 6777766643    334444445 22 233333 334555555555443 3


Q ss_pred             CCccEEEEcCCCH----------H---------------HHHHHH-HHc-ccCCEEEEEcCCCCC
Q 020768          253 TGIDVSFDCAGFN----------K---------------TMSTAL-SAT-RAGGKVCLVGMGHLE  290 (321)
Q Consensus       253 ~~~d~vid~~g~~----------~---------------~~~~~~-~~l-~~~G~~v~~g~~~~~  290 (321)
                      +.+|++++.+|--          +               +.++.+ +++ +++|++|.+++..+.
T Consensus       113 G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~  177 (300)
T KOG1201|consen  113 GDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGL  177 (300)
T ss_pred             CCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcc
Confidence            4799999988842          1               111222 233 477999999876553

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=95.83  E-value=0.13  Score=45.02  Aligned_cols=82  Identities=23%  Similarity=0.284  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChh--HHHHHHHcCCCe-EEecCC-CcccHHHHHHHHHHHhCCCc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY--RLSVAKELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI  255 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~--~~~~~~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~~  255 (321)
                      .++++||+|+ +++|...++.+...|+ .|+.+.++..  ..+..++.+... .+..+- +.++..+.+.++.+. .+++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~g~i   84 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEV-MGHI   84 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHH-cCCC
Confidence            4789999998 9999999999999999 5666655432  123344455332 122221 223333444443332 3579


Q ss_pred             cEEEEcCCC
Q 020768          256 DVSFDCAGF  264 (321)
Q Consensus       256 d~vid~~g~  264 (321)
                      |+++.+.|.
T Consensus        85 D~lv~~ag~   93 (251)
T PRK12481         85 DILINNAGI   93 (251)
T ss_pred             CEEEECCCc
Confidence            999999874

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=95.83  E-value=0.11  Score=42.87  Aligned_cols=96  Identities=18%  Similarity=0.198  Sum_probs=56.4

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh------------------hHH----HHHHHcCCCe-EEecCCCcccH
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD------------------YRL----SVAKELGADN-IVKVSTNLQDI  240 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~------------------~~~----~~~~~~g~~~-vi~~~~~~~~~  240 (321)
                      +|+|.|+|++|...++.+...|...+..+|.+.                  .|.    +.++++.... +..+.... + 
T Consensus         1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~-~-   78 (174)
T cd01487           1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKI-D-   78 (174)
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeec-C-
Confidence            589999999999999999899998788887664                  121    1233443322 21111110 1 


Q ss_pred             HHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccC-CEEEEEc
Q 020768          241 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVG  285 (321)
Q Consensus       241 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g  285 (321)
                      .+.+.++    -.++|+||||+.+.+.-....+.+... +.-+..+
T Consensus        79 ~~~~~~~----l~~~DlVi~~~d~~~~r~~i~~~~~~~~~ip~i~~  120 (174)
T cd01487          79 ENNLEGL----FGDCDIVVEAFDNAETKAMLAESLLGNKNKPVVCA  120 (174)
T ss_pred             hhhHHHH----hcCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEE
Confidence            0112222    246999999988766555455554444 5444443

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=95.81  E-value=0.12  Score=45.24  Aligned_cols=81  Identities=15%  Similarity=0.228  Sum_probs=49.3

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HH----cCCCe--EEecCCC-cccHHHHHHHHHHHhC
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE----LGADN--IVKVSTN-LQDIAEEVEKIQKAMG  252 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~----~g~~~--vi~~~~~-~~~~~~~~~~~~~~~~  252 (321)
                      ++++||+|+ |++|...+..+...|+ .++.++++.++.+.. .+    .+...  .+..+-. ..+..+.+.++.+. .
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~   79 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEI-F   79 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHH-c
Confidence            568999998 9999999998888898 677787776554332 22    22112  2222221 12223333333322 3


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      +++|+++.+.|.
T Consensus        80 ~~id~vv~~ag~   91 (259)
T PRK12384         80 GRVDLLVYNAGI   91 (259)
T ss_pred             CCCCEEEECCCc
Confidence            579999999873

>PRK05717 oxidoreductase; Validated

Probab=95.81  E-value=0.13  Score=44.97  Aligned_cols=82  Identities=26%  Similarity=0.231  Sum_probs=51.0

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH-HHHcCCC-eEEecCCC-cccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~-~~~~g~~-~vi~~~~~-~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .|.+++|+|+ |++|..++..+...|+ .|+.++++.++.+. .++++.. ..+..+-. ..+..+.+.++.+. .+.+|
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~g~id   86 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQ-FGRLD   86 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHH-hCCCC
Confidence            4678999998 9999999998888898 67777776654443 3445432 12222211 12233333443332 24699


Q ss_pred             EEEEcCCC
Q 020768          257 VSFDCAGF  264 (321)
Q Consensus       257 ~vid~~g~  264 (321)
                      ++|.+.|.
T Consensus        87 ~li~~ag~   94 (255)
T PRK05717         87 ALVCNAAI   94 (255)
T ss_pred             EEEECCCc
Confidence            99998874

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=95.80  E-value=0.12  Score=47.48  Aligned_cols=34  Identities=38%  Similarity=0.550  Sum_probs=30.5

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~  215 (321)
                      ..+|+|.|+|++|..++..+...|...+..+|.+
T Consensus        24 ~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D   57 (339)
T PRK07688         24 EKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD   57 (339)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4789999999999999999999999888888875

>PRK07890 short chain dehydrogenase; Provisional

Probab=95.79  E-value=0.13  Score=44.85  Aligned_cols=82  Identities=20%  Similarity=0.147  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-Hc---CCC-eEEecCC-CcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-EL---GAD-NIVKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~---g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      .+.+++|+|+ |++|...+..+...|+ .|+++++++++.+.+. ++   +.. ..+..+- +..+....+.+..+. .+
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g   81 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALER-FG   81 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHH-cC
Confidence            5688999998 9999999999999999 6788887776554332 22   322 1222221 122333333333222 34


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      .+|++|.+.|.
T Consensus        82 ~~d~vi~~ag~   92 (258)
T PRK07890         82 RVDALVNNAFR   92 (258)
T ss_pred             CccEEEECCcc
Confidence            68999999874

>PRK06953 short chain dehydrogenase; Provisional

Probab=95.79  E-value=0.087  Score=45.04  Aligned_cols=77  Identities=27%  Similarity=0.327  Sum_probs=50.1

Q ss_pred             CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHH-HhCCCccEEEE
Q 020768          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQK-AMGTGIDVSFD  260 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~-~~~~~~d~vid  260 (321)
                      ++++|+|+ |++|...++.+...|+ .++.++++.++.+.++..+... +..+-.+.   +.+.++.. ..+.++|+++.
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~-~~~D~~~~---~~v~~~~~~~~~~~~d~vi~   76 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEA-LALDVADP---ASVAGLAWKLDGEALDAAVY   76 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceE-EEecCCCH---HHHHHHHHHhcCCCCCEEEE
Confidence            47899998 9999999988888898 5888888877777666655432 22221111   12222211 12346999999


Q ss_pred             cCCC
Q 020768          261 CAGF  264 (321)
Q Consensus       261 ~~g~  264 (321)
                      +.|.
T Consensus        77 ~ag~   80 (222)
T PRK06953         77 VAGV   80 (222)
T ss_pred             CCCc
Confidence            8775

>PLN02253 xanthoxin dehydrogenase

Probab=95.79  E-value=0.12  Score=45.89  Aligned_cols=82  Identities=21%  Similarity=0.253  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH-HHHcCC--C-eEEecCC-CcccHHHHHHHHHHHhCCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGA--D-NIVKVST-NLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~-~~~~g~--~-~vi~~~~-~~~~~~~~~~~~~~~~~~~  254 (321)
                      .+.++||+|+ |++|...++.+...|+ .|++++++.++.+. ..+++.  . ..+..+- +..+..+.+..+.+. .++
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~-~g~   94 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDK-FGT   94 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHH-hCC
Confidence            3678999998 9999999988888898 67777776655433 333432  1 1221111 122333333433332 357


Q ss_pred             ccEEEEcCCC
Q 020768          255 IDVSFDCAGF  264 (321)
Q Consensus       255 ~d~vid~~g~  264 (321)
                      +|++|.+.|.
T Consensus        95 id~li~~Ag~  104 (280)
T PLN02253         95 LDIMVNNAGL  104 (280)
T ss_pred             CCEEEECCCc
Confidence            9999998874

>PRK07035 short chain dehydrogenase; Provisional

Probab=95.78  E-value=0.13  Score=44.79  Aligned_cols=82  Identities=15%  Similarity=0.168  Sum_probs=51.0

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HH---cCCC-eEEecCC-CcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGAD-NIVKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~---~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      .+.++||+|+ |++|...++.+...|. +|+.++++.++.+.+ ++   .+.. ..+..+- +..+..+.+.++.+. -+
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   84 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRER-HG   84 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence            3578999998 9999999999999998 688888876654433 22   2322 1222221 122333333343332 34


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      .+|+++.+.|.
T Consensus        85 ~id~li~~ag~   95 (252)
T PRK07035         85 RLDILVNNAAA   95 (252)
T ss_pred             CCCEEEECCCc
Confidence            68999998873

>PRK05650 short chain dehydrogenase; Provisional

Probab=95.77  E-value=0.43  Score=42.06  Aligned_cols=79  Identities=24%  Similarity=0.342  Sum_probs=47.8

Q ss_pred             EEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCe-EEecCC-CcccHHHHHHHHHHHhCCCcc
Q 020768          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       184 ~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      +++|+|+ |++|...+..+...|. .|+.++++.++.+.+    +..+.+. .+..+- +..+..+.+..+.. ...++|
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~-~~~~id   79 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEE-KWGGID   79 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH-HcCCCC
Confidence            6899998 9999999988888898 577777776654422    2223222 122211 11222233333322 235799


Q ss_pred             EEEEcCCC
Q 020768          257 VSFDCAGF  264 (321)
Q Consensus       257 ~vid~~g~  264 (321)
                      ++|.+.|.
T Consensus        80 ~lI~~ag~   87 (270)
T PRK05650         80 VIVNNAGV   87 (270)
T ss_pred             EEEECCCC
Confidence            99999884

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=95.77  E-value=0.14  Score=48.33  Aligned_cols=76  Identities=16%  Similarity=0.222  Sum_probs=54.5

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHH-HHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      -.+.+++|+|+|++|.+++..+...|+..+.++.++.+|.+ ++++++-..++.+        +.+.+.    -..+|+|
T Consensus       179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~--------~~l~~~----l~~aDiV  246 (414)
T PRK13940        179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL--------SELPQL----IKKADII  246 (414)
T ss_pred             ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH--------HHHHHH----hccCCEE
Confidence            45789999999999999999999999888888888877654 4556652222221        112221    2458999


Q ss_pred             EEcCCCHHH
Q 020768          259 FDCAGFNKT  267 (321)
Q Consensus       259 id~~g~~~~  267 (321)
                      |.|++.+..
T Consensus       247 I~aT~a~~~  255 (414)
T PRK13940        247 IAAVNVLEY  255 (414)
T ss_pred             EECcCCCCe
Confidence            999998754

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=95.76  E-value=0.14  Score=47.11  Aligned_cols=34  Identities=35%  Similarity=0.537  Sum_probs=30.3

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~  215 (321)
                      +.+|+|.|+|++|..++..+...|...+..+|.+
T Consensus        24 ~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D   57 (338)
T PRK12475         24 EKHVLIVGAGALGAANAEALVRAGIGKLTIADRD   57 (338)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            4689999999999999999999999888888775

>PRK06172 short chain dehydrogenase; Provisional

Probab=95.75  E-value=0.14  Score=44.64  Aligned_cols=82  Identities=26%  Similarity=0.330  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH----HHHcCCCe-EEecCCC-cccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~----~~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~  253 (321)
                      .+.+++|+|+ |++|...++.+...|+ .|+.++++.++.+.    +++.+... .+..+-. ..+..+.+.+..+. .+
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~g   83 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAA-YG   83 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-hC
Confidence            4689999998 9999999988888898 58888887665432    23334321 2222211 12223333333222 35


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|.+.|.
T Consensus        84 ~id~li~~ag~   94 (253)
T PRK06172         84 RLDYAFNNAGI   94 (253)
T ss_pred             CCCEEEECCCC
Confidence            78999999874

>PRK06482 short chain dehydrogenase; Provisional

Probab=95.74  E-value=0.11  Score=45.95  Aligned_cols=80  Identities=21%  Similarity=0.202  Sum_probs=50.2

Q ss_pred             CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH-cCCC-eEEecCC-CcccHHHHHHHHHHHhCCCccEE
Q 020768          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~-~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      .++||+|+ |++|...++.+...|. .|+++.++.++.+.+++ .+.. ..+..+- +.....+.+.++.+. ..++|++
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~v   80 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAA-LGRIDVV   80 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHH-cCCCCEE
Confidence            57999998 9999999988888898 68888888776665543 3321 1112111 112223333333222 3578999


Q ss_pred             EEcCCC
Q 020768          259 FDCAGF  264 (321)
Q Consensus       259 id~~g~  264 (321)
                      |.++|.
T Consensus        81 i~~ag~   86 (276)
T PRK06482         81 VSNAGY   86 (276)
T ss_pred             EECCCC
Confidence            999874

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=95.74  E-value=0.14  Score=44.81  Aligned_cols=82  Identities=23%  Similarity=0.274  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCC-eEEecCC-CcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGAD-NIVKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      .+.++||+|+ |++|...++.+...|+ .|+.++++.++.+.+.    ..+.. ..+..+- +.++..+.+.++.+. .+
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~-~~   88 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLER-FG   88 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH-hC
Confidence            4689999998 9999999999988999 6788888776655433    22222 1222221 122333333333332 35


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|.+|.+.|.
T Consensus        89 ~id~vi~~ag~   99 (259)
T PRK08213         89 HVDILVNNAGA   99 (259)
T ss_pred             CCCEEEECCCC
Confidence            78999999874

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=95.73  E-value=0.41  Score=40.16  Aligned_cols=99  Identities=25%  Similarity=0.287  Sum_probs=56.4

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-Hc----CCCeEEecCCCcccHHHHHHHHHHHhCCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-EL----GADNIVKVSTNLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~----g~~~vi~~~~~~~~~~~~~~~~~~~~~~~  254 (321)
                      .+.+++|+|+ |++|..++..+...|. .++.+.++.++.+.+. ++    +.. +...+.  .+.. .+.+..    .+
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~-~~~~~~--~~~~-~~~~~~----~~   97 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEG-VGAVET--SDDA-ARAAAI----KG   97 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCc-EEEeeC--CCHH-HHHHHH----hc
Confidence            5679999998 9999988888888887 6777778877655433 23    222 111111  1111 122221    36


Q ss_pred             ccEEEEcCCCHHHHHHHHH-HcccCCEEEEEcCCC
Q 020768          255 IDVSFDCAGFNKTMSTALS-ATRAGGKVCLVGMGH  288 (321)
Q Consensus       255 ~d~vid~~g~~~~~~~~~~-~l~~~G~~v~~g~~~  288 (321)
                      .|+||.+++.+........ ..+++-.++.+..+.
T Consensus        98 ~diVi~at~~g~~~~~~~~~~~~~~~vv~D~~~~~  132 (194)
T cd01078          98 ADVVFAAGAAGVELLEKLAWAPKPLAVAADVNAVP  132 (194)
T ss_pred             CCEEEECCCCCceechhhhcccCceeEEEEccCCC
Confidence            8999998886542112222 233333455555443

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK01581 speE spermidine synthase; Validated

Probab=95.73  E-value=0.27  Score=45.43  Aligned_cols=100  Identities=20%  Similarity=0.143  Sum_probs=65.7

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcC-C---------CeEEecCCCcccHHHHHHHHHH
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG-A---------DNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g-~---------~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      ...++|||+|+| .|..+..+++..+...|.+++-+++-.+.++++. .         +.-+..  ...|..+.+..   
T Consensus       149 ~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~v--vi~Da~~fL~~---  222 (374)
T PRK01581        149 IDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNV--HVCDAKEFLSS---  222 (374)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEE--EECcHHHHHHh---
Confidence            445799999964 4667777777666668999999999999988631 0         110110  01233333332   


Q ss_pred             HhCCCccEEEEcCCCH-----------HHHHHHHHHcccCCEEEEEcC
Q 020768          250 AMGTGIDVSFDCAGFN-----------KTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       250 ~~~~~~d~vid~~g~~-----------~~~~~~~~~l~~~G~~v~~g~  286 (321)
                       ....+|+||--...+           +.+..+.+.|+++|.++.-..
T Consensus       223 -~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs~  269 (374)
T PRK01581        223 -PSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQSN  269 (374)
T ss_pred             -cCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence             245799988765332           357788999999999877653

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=95.73  E-value=0.16  Score=43.38  Aligned_cols=34  Identities=29%  Similarity=0.413  Sum_probs=30.3

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~  215 (321)
                      ..+|+|.|+|++|..+++.+...|...+..+|.+
T Consensus        28 ~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         28 KAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             CCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4689999999999999999999999888888766

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=95.71  E-value=0.14  Score=44.75  Aligned_cols=82  Identities=17%  Similarity=0.190  Sum_probs=49.3

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHH---HHHHcCCC-eEEecCCC-cccHHHHHHHHHHHhCCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS---VAKELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~---~~~~~g~~-~vi~~~~~-~~~~~~~~~~~~~~~~~~  254 (321)
                      .+.++||+|+ +++|...++.+...|+ .|+++.++++..+   ...+.+.. ..+..+-. ..+..+.+.++.+. .++
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~g~   91 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEE-FGK   91 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-cCC
Confidence            4789999998 9999999999999999 5666666532222   22233422 12222222 22333333443332 357


Q ss_pred             ccEEEEcCCC
Q 020768          255 IDVSFDCAGF  264 (321)
Q Consensus       255 ~d~vid~~g~  264 (321)
                      +|++|.+.|.
T Consensus        92 id~li~~ag~  101 (258)
T PRK06935         92 IDILVNNAGT  101 (258)
T ss_pred             CCEEEECCCC
Confidence            9999998874

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=95.71  E-value=0.27  Score=42.44  Aligned_cols=81  Identities=16%  Similarity=0.154  Sum_probs=46.6

Q ss_pred             CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHH-H---HHHcCCC-eEEecCCC-cccHHHHHHHHHHHhCCCc
Q 020768          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-V---AKELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGI  255 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~-~---~~~~g~~-~vi~~~~~-~~~~~~~~~~~~~~~~~~~  255 (321)
                      .++||+|+ |++|...+..+...|++.++...++.++.+ .   ++..+.. ..+..+-. .....+.+.++.+ ..+++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~-~~~~i   80 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQ-HDEPL   80 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHH-hCCCC
Confidence            47899998 999999999888899853333445554433 2   2223322 12222211 2223333333322 24679


Q ss_pred             cEEEEcCCC
Q 020768          256 DVSFDCAGF  264 (321)
Q Consensus       256 d~vid~~g~  264 (321)
                      |++|.+.|.
T Consensus        81 d~vi~~ag~   89 (247)
T PRK09730         81 AALVNNAGI   89 (247)
T ss_pred             CEEEECCCC
Confidence            999999985

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.70  E-value=0.14  Score=45.16  Aligned_cols=82  Identities=21%  Similarity=0.278  Sum_probs=48.2

Q ss_pred             CCCEEEEEcC---ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCCeEEecCC-CcccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADNIVKVST-NLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga---g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~-~~~~~~~~~~~~~~~~~  252 (321)
                      .+.++||+|+   +++|...++.+...|+ .|+.+.++++..+.++    +.+....+..+- +.++..+.+.++.+. .
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~   82 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKH-W   82 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHH-h
Confidence            4678999984   5899999998888999 4665544432222222    334322222222 223333344444332 3


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      +++|++|++.|-
T Consensus        83 g~iD~lVnnAG~   94 (261)
T PRK08690         83 DGLDGLVHSIGF   94 (261)
T ss_pred             CCCcEEEECCcc
Confidence            579999999874

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=95.69  E-value=0.065  Score=47.83  Aligned_cols=96  Identities=19%  Similarity=0.284  Sum_probs=68.7

Q ss_pred             CEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcC
Q 020768          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  262 (321)
                      .+|.|+|+|-+|.-++.+|.-+|+ .|...+.+.+|+..+..+-...+..+.....++.+.+        .+.|++|.++
T Consensus       169 ~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v--------~~aDlvIgaV  239 (371)
T COG0686         169 AKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAV--------KKADLVIGAV  239 (371)
T ss_pred             ccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHh--------hhccEEEEEE
Confidence            357788999999999999999999 6888999999999998744444333333333333322        3578888754


Q ss_pred             CCH------HHHHHHHHHcccCCEEEEEcCC
Q 020768          263 GFN------KTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       263 g~~------~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      =-+      -..+..++.+++++.++.+..-
T Consensus       240 LIpgakaPkLvt~e~vk~MkpGsVivDVAiD  270 (371)
T COG0686         240 LIPGAKAPKLVTREMVKQMKPGSVIVDVAID  270 (371)
T ss_pred             EecCCCCceehhHHHHHhcCCCcEEEEEEEc
Confidence            221      1356778999999999999743

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=95.69  E-value=0.079  Score=47.52  Aligned_cols=95  Identities=21%  Similarity=0.182  Sum_probs=59.7

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCC----CeEEecCCCcccHHHHHHHHHHHhCCCc
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGA----DNIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~----~~vi~~~~~~~~~~~~~~~~~~~~~~~~  255 (321)
                      .+.+++|+|+|++|.+++..+...|++.+.+++++.+|.+.+ ++++.    ..+...    .+.    .+.    -..+
T Consensus       126 ~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~----~~~----~~~----~~~a  193 (284)
T PRK12549        126 SLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAG----SDL----AAA----LAAA  193 (284)
T ss_pred             cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEec----cch----Hhh----hCCC
Confidence            568999999999999999999999998899999988776644 34421    112111    111    111    1458


Q ss_pred             cEEEEcCCCHH----HHHHHHHHcccCCEEEEEcCC
Q 020768          256 DVSFDCAGFNK----TMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       256 d~vid~~g~~~----~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      |+||+|+...-    ........++++..++.+-+.
T Consensus       194 DiVInaTp~Gm~~~~~~~~~~~~l~~~~~v~DivY~  229 (284)
T PRK12549        194 DGLVHATPTGMAKHPGLPLPAELLRPGLWVADIVYF  229 (284)
T ss_pred             CEEEECCcCCCCCCCCCCCCHHHcCCCcEEEEeeeC
Confidence            99999964310    001112456666666655544

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=95.68  E-value=0.23  Score=42.98  Aligned_cols=82  Identities=20%  Similarity=0.219  Sum_probs=47.6

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChh-HHHHHH---HcCCCeE-EecCC-CcccHHHHHHHHHHHhCCC
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY-RLSVAK---ELGADNI-VKVST-NLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~-~~~~~~---~~g~~~v-i~~~~-~~~~~~~~~~~~~~~~~~~  254 (321)
                      +.++||+|+ |++|...++.+...|++.++...++.. +.+.++   +.+.... +..+- +..+..+.+.++.+. .++
T Consensus         3 ~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   81 (246)
T PRK12938          3 QRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAE-VGE   81 (246)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-hCC
Confidence            578899998 999999999999999953333433332 222232   3344322 11111 122333333333332 357


Q ss_pred             ccEEEEcCCC
Q 020768          255 IDVSFDCAGF  264 (321)
Q Consensus       255 ~d~vid~~g~  264 (321)
                      +|+++.+.|.
T Consensus        82 id~li~~ag~   91 (246)
T PRK12938         82 IDVLVNNAGI   91 (246)
T ss_pred             CCEEEECCCC
Confidence            9999999985

>PRK06138 short chain dehydrogenase; Provisional

Probab=95.68  E-value=0.14  Score=44.44  Aligned_cols=82  Identities=23%  Similarity=0.246  Sum_probs=50.1

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH-HHHc--CCC-eEEecCCC-cccHHHHHHHHHHHhCCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKEL--GAD-NIVKVSTN-LQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~-~~~~--g~~-~vi~~~~~-~~~~~~~~~~~~~~~~~~  254 (321)
                      .+.+++|+|+ |++|...++.+...|+ +|+.+.++.++.+. ..++  +.. ..+..+-. .....+.+.++.+. .++
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~-~~~   81 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAAR-WGR   81 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cCC
Confidence            3678999998 9999999988888898 57777777655433 2222  221 22222221 12223333333322 357


Q ss_pred             ccEEEEcCCC
Q 020768          255 IDVSFDCAGF  264 (321)
Q Consensus       255 ~d~vid~~g~  264 (321)
                      +|++|.+.|.
T Consensus        82 id~vi~~ag~   91 (252)
T PRK06138         82 LDVLVNNAGF   91 (252)
T ss_pred             CCEEEECCCC
Confidence            9999999884

>PRK06940 short chain dehydrogenase; Provisional

Probab=95.68  E-value=0.23  Score=44.14  Aligned_cols=102  Identities=18%  Similarity=0.252  Sum_probs=59.7

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HH---cCCCe-EEecCC-CcccHHHHHHHHHHHhCCCc
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI  255 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~---~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~~  255 (321)
                      +++++|+|+|++|...+..+. .|. .|+.++++.++.+.+ ++   .+... .+..+- +.++..+.+.++ +. .+++
T Consensus         2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~-~g~i   77 (275)
T PRK06940          2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QT-LGPV   77 (275)
T ss_pred             CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-Hh-cCCC
Confidence            357888899999999888874 787 677777776654432 22   23221 222221 122333333333 21 3579


Q ss_pred             cEEEEcCCCHH------------------HHHHHHHHcccCCEEEEEcCC
Q 020768          256 DVSFDCAGFNK------------------TMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       256 d~vid~~g~~~------------------~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      |++|.+.|-..                  .++.+...+..+|+++.+++.
T Consensus        78 d~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~  127 (275)
T PRK06940         78 TGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQ  127 (275)
T ss_pred             CEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEec
Confidence            99999998421                  133444555667777777644

>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]

Probab=95.67  E-value=0.076  Score=47.25  Aligned_cols=130  Identities=15%  Similarity=0.187  Sum_probs=87.3

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCC---------CcccHHHHHHHHHHH
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST---------NLQDIAEEVEKIQKA  250 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~---------~~~~~~~~~~~~~~~  250 (321)
                      -++.++++.|+|.+|+.++-.++..|+ .|-.-+....+.+..+.+|+...-..++         -+++|.+.-.++...
T Consensus       162 v~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~a~  240 (356)
T COG3288         162 VSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELVAE  240 (356)
T ss_pred             ccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHHHHH
Confidence            456778999999999999999999998 6666677778888888888754321111         122333333333222


Q ss_pred             hCCCccEEEEcCCC---H--H-HHHHHHHHcccCCEEEEEcCC-CCCccc--cchhhhccceEEEEeeh
Q 020768          251 MGTGIDVSFDCAGF---N--K-TMSTALSATRAGGKVCLVGMG-HLEMTV--PLTPAAARYLIYSFLFH  310 (321)
Q Consensus       251 ~~~~~d~vid~~g~---~--~-~~~~~~~~l~~~G~~v~~g~~-~~~~~~--~~~~~~~k~~~i~g~~~  310 (321)
                      .-.++|+||-+.=-   +  . .-...+..++||+.++.+... ++..+.  +-......+++|.|-.+
T Consensus       241 ~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~n  309 (356)
T COG3288         241 QAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYTN  309 (356)
T ss_pred             HhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCcccccCCeEEEeCCeEEEeecC
Confidence            35689999986422   1  2 234777999999999999854 333222  22446788999999765

>PLN02823 spermine synthase

Probab=95.66  E-value=0.15  Score=46.82  Aligned_cols=98  Identities=18%  Similarity=0.226  Sum_probs=63.2

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCC-C------eEEecCCCcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA-D------NIVKVSTNLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~-~------~vi~~~~~~~~~~~~~~~~~~~~~~  253 (321)
                      ..++|||+|+|. |..+..+++..+...+.+++-+++-.++++++-. .      .-+.+  ...|..+.+++    ...
T Consensus       103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v--~~~Da~~~L~~----~~~  175 (336)
T PLN02823        103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLEL--IINDARAELEK----RDE  175 (336)
T ss_pred             CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEE--EEChhHHHHhh----CCC
Confidence            457899998753 5556677777777789999999999999987432 1      00000  01233333322    356


Q ss_pred             CccEEEEcCCC------------HHHHH-HHHHHcccCCEEEEEc
Q 020768          254 GIDVSFDCAGF------------NKTMS-TALSATRAGGKVCLVG  285 (321)
Q Consensus       254 ~~d~vid~~g~------------~~~~~-~~~~~l~~~G~~v~~g  285 (321)
                      .+|+||--...            .+.++ .+.+.|+++|.++.-.
T Consensus       176 ~yDvIi~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~Gvlv~q~  220 (336)
T PLN02823        176 KFDVIIGDLADPVEGGPCYQLYTKSFYERIVKPKLNPGGIFVTQA  220 (336)
T ss_pred             CccEEEecCCCccccCcchhhccHHHHHHHHHHhcCCCcEEEEec
Confidence            79998864322            23455 7888999999987654

>PRK07074 short chain dehydrogenase; Provisional

Probab=95.64  E-value=0.14  Score=44.67  Aligned_cols=81  Identities=25%  Similarity=0.309  Sum_probs=49.8

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCC--eEEecCCC-cccHHHHHHHHHHHhCCCcc
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGAD--NIVKVSTN-LQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~--~vi~~~~~-~~~~~~~~~~~~~~~~~~~d  256 (321)
                      +.++||+|+ |++|...+..+...|. .+++++++.++.+.+ +++.-.  ..+..+-. ..+..+.+.++.+. .+++|
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~~d   79 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAE-RGPVD   79 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH-cCCCC
Confidence            468999998 9999999988888898 577787877665433 333211  12222211 12222333333222 34699


Q ss_pred             EEEEcCCC
Q 020768          257 VSFDCAGF  264 (321)
Q Consensus       257 ~vid~~g~  264 (321)
                      +++.+.|.
T Consensus        80 ~vi~~ag~   87 (257)
T PRK07074         80 VLVANAGA   87 (257)
T ss_pred             EEEECCCC
Confidence            99999974

>PLN03075 nicotianamine synthase; Provisional

Probab=95.64  E-value=0.12  Score=46.41  Aligned_cols=99  Identities=22%  Similarity=0.248  Sum_probs=67.8

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHc-CCCeEEEEeCChhHHHHHHHcC-----CCeEEecCCCcccHHHHHHHHHHHhCC
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKELG-----ADNIVKVSTNLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~-g~~~vv~v~~~~~~~~~~~~~g-----~~~vi~~~~~~~~~~~~~~~~~~~~~~  253 (321)
                      .++++|+=+|+|+.++.++.+++.+ ....++.+|.+++..+.+++.-     ...-+.+...  |..+    .. ....
T Consensus       122 ~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~--Da~~----~~-~~l~  194 (296)
T PLN03075        122 GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTA--DVMD----VT-ESLK  194 (296)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEEC--chhh----cc-cccC
Confidence            4789999999999999888888654 3347999999999888887633     2222222211  1111    10 0125


Q ss_pred             CccEEEEcC------CC-HHHHHHHHHHcccCCEEEEEc
Q 020768          254 GIDVSFDCA------GF-NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       254 ~~d~vid~~------g~-~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      ++|+|+-.+      .. ...++.+.+.|++||.+++-.
T Consensus       195 ~FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~  233 (296)
T PLN03075        195 EYDVVFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS  233 (296)
T ss_pred             CcCEEEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence            799999875      22 357889999999999988765

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.64  E-value=0.14  Score=44.65  Aligned_cols=94  Identities=17%  Similarity=0.212  Sum_probs=56.6

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh-------------------hH----HHHHHHcCCCeEEecCCCcc
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-------------------YR----LSVAKELGADNIVKVSTNLQ  238 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~-------------------~~----~~~~~~~g~~~vi~~~~~~~  238 (321)
                      +.+|+|.|+|++|..+++.+...|...+..+|.+.                   .|    .+.++++..+.-+......-
T Consensus        24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~~i  103 (240)
T TIGR02355        24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINAKL  103 (240)
T ss_pred             CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEeccC
Confidence            37899999999999999999999998888876442                   11    12344455433222111111


Q ss_pred             cHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCE
Q 020768          239 DIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGK  280 (321)
Q Consensus       239 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~  280 (321)
                      + .+.+.++    -.++|+||||..+.+.-..+-+.+...+.
T Consensus       104 ~-~~~~~~~----~~~~DlVvd~~D~~~~r~~ln~~~~~~~i  140 (240)
T TIGR02355       104 D-DAELAAL----IAEHDIVVDCTDNVEVRNQLNRQCFAAKV  140 (240)
T ss_pred             C-HHHHHHH----hhcCCEEEEcCCCHHHHHHHHHHHHHcCC
Confidence            1 1122222    24689999999987654444444444443

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.63  E-value=0.13  Score=47.69  Aligned_cols=94  Identities=24%  Similarity=0.193  Sum_probs=56.7

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh-------------------hH----HHHHHHcCCCeEEecCCCcc
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-------------------YR----LSVAKELGADNIVKVSTNLQ  238 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~-------------------~~----~~~~~~~g~~~vi~~~~~~~  238 (321)
                      ..+|+|+|+|++|..++..+...|...+..+|.+.                   .|    .+.++++....-+......-
T Consensus        28 ~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~~~i  107 (355)
T PRK05597         28 DAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSVRRL  107 (355)
T ss_pred             CCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEEeec
Confidence            47899999999999999999999999888887553                   12    22344555443322111111


Q ss_pred             cHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCE
Q 020768          239 DIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGK  280 (321)
Q Consensus       239 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~  280 (321)
                      +. +...++    -.++|+|+||..+...-..+-+.+...+.
T Consensus       108 ~~-~~~~~~----~~~~DvVvd~~d~~~~r~~~n~~c~~~~i  144 (355)
T PRK05597        108 TW-SNALDE----LRDADVILDGSDNFDTRHLASWAAARLGI  144 (355)
T ss_pred             CH-HHHHHH----HhCCCEEEECCCCHHHHHHHHHHHHHcCC
Confidence            11 112222    24699999999875543333344444443

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=95.63  E-value=0.12  Score=40.58  Aligned_cols=97  Identities=23%  Similarity=0.316  Sum_probs=59.7

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh-------------------hH----HHHHHHcCCC-eEEecCCCc
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-------------------YR----LSVAKELGAD-NIVKVSTNL  237 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~-------------------~~----~~~~~~~g~~-~vi~~~~~~  237 (321)
                      ..+|+|.|+|++|...+..+-..|...+..+|...                   .|    .+.++++.+. .+..+..  
T Consensus         2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~--   79 (135)
T PF00899_consen    2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPE--   79 (135)
T ss_dssp             T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEES--
T ss_pred             CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeec--
Confidence            46899999999999999999999998888887431                   12    2233344432 2222211  


Q ss_pred             ccH-HHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEc
Q 020768          238 QDI-AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       238 ~~~-~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                       ++ .+...++.    .++|+||+|+.+......+.+.+...+.-+..+
T Consensus        80 -~~~~~~~~~~~----~~~d~vi~~~d~~~~~~~l~~~~~~~~~p~i~~  123 (135)
T PF00899_consen   80 -KIDEENIEELL----KDYDIVIDCVDSLAARLLLNEICREYGIPFIDA  123 (135)
T ss_dssp             -HCSHHHHHHHH----HTSSEEEEESSSHHHHHHHHHHHHHTT-EEEEE
T ss_pred             -ccccccccccc----cCCCEEEEecCCHHHHHHHHHHHHHcCCCEEEE
Confidence             11 12233322    368999999998666556666676666554444

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK08226 short chain dehydrogenase; Provisional

Probab=95.63  E-value=0.16  Score=44.47  Aligned_cols=82  Identities=22%  Similarity=0.276  Sum_probs=50.6

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH---cCCCe-EEecCCC-cccHHHHHHHHHHHhCCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE---LGADN-IVKVSTN-LQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~---~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~~  254 (321)
                      .+.+++|+|+ |++|...+..+...|+ .|+.++++.+..+.+++   .+... .+..+-. ..+..+.+.++... .+.
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~~~   82 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEK-EGR   82 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH-cCC
Confidence            4678999998 9999999999988999 57777777654443332   23221 1222111 12233333333322 356


Q ss_pred             ccEEEEcCCC
Q 020768          255 IDVSFDCAGF  264 (321)
Q Consensus       255 ~d~vid~~g~  264 (321)
                      +|++|.+.|.
T Consensus        83 id~vi~~ag~   92 (263)
T PRK08226         83 IDILVNNAGV   92 (263)
T ss_pred             CCEEEECCCc
Confidence            8999999883

>PRK06181 short chain dehydrogenase; Provisional

Probab=95.62  E-value=0.18  Score=44.25  Aligned_cols=81  Identities=23%  Similarity=0.341  Sum_probs=49.4

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCe-EEecCC-CcccHHHHHHHHHHHhCCC
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVST-NLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~  254 (321)
                      +.++||+|+ |++|..+++.+...|. .|+++++++++.+.+    +..+... ++..+- +.....+.+.+..+. .++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~   78 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVAR-FGG   78 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cCC
Confidence            357999998 9999999999988998 688888776554322    2233321 121111 122233333333222 346


Q ss_pred             ccEEEEcCCC
Q 020768          255 IDVSFDCAGF  264 (321)
Q Consensus       255 ~d~vid~~g~  264 (321)
                      +|++|.+.|.
T Consensus        79 id~vi~~ag~   88 (263)
T PRK06181         79 IDILVNNAGI   88 (263)
T ss_pred             CCEEEECCCc
Confidence            8999999874

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=95.62  E-value=0.15  Score=45.08  Aligned_cols=81  Identities=20%  Similarity=0.264  Sum_probs=49.9

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HH---cCCC-eEEecCCC-cccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~---~g~~-~vi~~~~~-~~~~~~~~~~~~~~~~~  253 (321)
                      .+.+++|+|+ |++|...++.+...|+ +|++++++.++.+.+ ++   .+.. ..+..+-. ..+..+.+.++.+. .+
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~g   86 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILED-FG   86 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence            4688999998 9999999999989999 677777776554332 22   2322 11222211 12223333333222 35


Q ss_pred             CccEEEEcCC
Q 020768          254 GIDVSFDCAG  263 (321)
Q Consensus       254 ~~d~vid~~g  263 (321)
                      ++|++|.+.|
T Consensus        87 ~id~li~~ag   96 (278)
T PRK08277         87 PCDILINGAG   96 (278)
T ss_pred             CCCEEEECCC
Confidence            7999999987

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=95.60  E-value=0.17  Score=43.84  Aligned_cols=81  Identities=19%  Similarity=0.276  Sum_probs=50.3

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCC-eEEecCCC-cccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~-~vi~~~~~-~~~~~~~~~~~~~~~~~  253 (321)
                      .+.++||+|+ |++|...++.+...|. .|+.++++.++...+.    +.+.. ..+..+-. .....+.+.++.+. ..
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~~   79 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQA-LG   79 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence            3678999998 9999999999988998 5777777765544332    22322 22222221 22233333333322 35


Q ss_pred             CccEEEEcCC
Q 020768          254 GIDVSFDCAG  263 (321)
Q Consensus       254 ~~d~vid~~g  263 (321)
                      ++|++|.+.|
T Consensus        80 ~~d~vi~~ag   89 (250)
T TIGR03206        80 PVDVLVNNAG   89 (250)
T ss_pred             CCCEEEECCC
Confidence            7899999997

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06197 short chain dehydrogenase; Provisional

Probab=95.59  E-value=0.15  Score=46.04  Aligned_cols=82  Identities=22%  Similarity=0.307  Sum_probs=49.5

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHc-----CCC-eEEecCC-CcccHHHHHHHHHHHh
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL-----GAD-NIVKVST-NLQDIAEEVEKIQKAM  251 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~-----g~~-~vi~~~~-~~~~~~~~~~~~~~~~  251 (321)
                      .+.+++|+|+ |++|..+++.+...|+ .|+.+.++.++.+.+ +++     +.. ..+..+- +..+..+.+.++.+. 
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~-   92 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA-   92 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh-
Confidence            5689999998 9999999998888898 577777776654322 221     111 1222221 112233333333222 


Q ss_pred             CCCccEEEEcCCC
Q 020768          252 GTGIDVSFDCAGF  264 (321)
Q Consensus       252 ~~~~d~vid~~g~  264 (321)
                      .+++|++|.+.|.
T Consensus        93 ~~~iD~li~nAg~  105 (306)
T PRK06197         93 YPRIDLLINNAGV  105 (306)
T ss_pred             CCCCCEEEECCcc
Confidence            3469999999873

>PRK06720 hypothetical protein; Provisional

Probab=95.59  E-value=0.28  Score=40.34  Aligned_cols=82  Identities=22%  Similarity=0.297  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-H---HcCCCe-EEecCCC-cccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-K---ELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~---~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~  253 (321)
                      .+..++|+|+ +++|...+..+...|+ .|++++++.+..+.. +   +.+... .+..+-. ..++.+.+.++.+ ..+
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~-~~G   92 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLN-AFS   92 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH-HcC
Confidence            4778999998 8999999988888898 688887776554322 2   234332 2222221 1233333333322 235


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|+++.+.|.
T Consensus        93 ~iDilVnnAG~  103 (169)
T PRK06720         93 RIDMLFQNAGL  103 (169)
T ss_pred             CCCEEEECCCc
Confidence            78999999884

>PRK08264 short chain dehydrogenase; Validated

Probab=95.57  E-value=0.076  Score=45.79  Aligned_cols=77  Identities=23%  Similarity=0.279  Sum_probs=48.5

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCC-eEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      .+.+++|+|+ |++|...++.+...|.++|+++.++.++.+.   .+.. ..+..+-.  +.. .+.++.+. -..+|++
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~--~~~-~~~~~~~~-~~~id~v   77 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVT--DPA-SVAAAAEA-ASDVTIL   77 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCC--CHH-HHHHHHHh-cCCCCEE
Confidence            4678999998 9999999999999998557777777665432   2221 12221111  111 23333221 2458999


Q ss_pred             EEcCCC
Q 020768          259 FDCAGF  264 (321)
Q Consensus       259 id~~g~  264 (321)
                      |.+.|.
T Consensus        78 i~~ag~   83 (238)
T PRK08264         78 VNNAGI   83 (238)
T ss_pred             EECCCc
Confidence            999886

>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating)

Probab=95.56  E-value=0.17  Score=45.30  Aligned_cols=90  Identities=23%  Similarity=0.285  Sum_probs=59.4

Q ss_pred             EEEEEcCChhHHHH-HHHHHHcCCCeEEEEeCChhH--HHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          184 NVLIMGAGPIGLVT-MLGARAFGAPRIVIVDVDDYR--LSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       184 ~vlI~Gag~vG~~a-~qla~~~g~~~vv~v~~~~~~--~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      ++.|+|+|.+|... ..+.+..+++.+.+++.++++  ++.++++|......      ++.    .+..  ...+|+|++
T Consensus         3 rVAIIG~G~IG~~h~~~ll~~~~~elvaV~d~d~es~~la~A~~~Gi~~~~~------~~e----~ll~--~~dIDaV~i   70 (285)
T TIGR03215         3 KVAIIGSGNIGTDLMYKLLRSEHLEMVAMVGIDPESDGLARARELGVKTSAE------GVD----GLLA--NPDIDIVFD   70 (285)
T ss_pred             EEEEEeCcHHHHHHHHHHHhCCCcEEEEEEeCCcccHHHHHHHHCCCCEEEC------CHH----HHhc--CCCCCEEEE
Confidence            68899999999855 555555566545556655544  46778888654321      111    1111  246999999


Q ss_pred             cCCCHHHHHHHHHHcccCCEEEEEc
Q 020768          261 CAGFNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      +++...+.+.+..++..|=.++...
T Consensus        71 aTp~~~H~e~a~~al~aGk~VIdek   95 (285)
T TIGR03215        71 ATSAKAHARHARLLAELGKIVIDLT   95 (285)
T ss_pred             CCCcHHHHHHHHHHHHcCCEEEECC
Confidence            9999888888887777766655443

Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=95.55  E-value=0.43  Score=41.04  Aligned_cols=82  Identities=22%  Similarity=0.270  Sum_probs=46.1

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChh-HHH-H---HHHcCCCe-EEecCCC-cccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY-RLS-V---AKELGADN-IVKVSTN-LQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~-~~~-~---~~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~  252 (321)
                      .+.++||+|+ |++|...+..+...|++ |+++.++.+ +.+ .   ++..+... .+..+-. .....+.+.++.+. .
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~   81 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGAN-VVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAE-F   81 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            3568999998 99999999999989995 544444433 222 2   22223221 2211211 12222333333221 3


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      .++|.+|.+.|.
T Consensus        82 ~~id~vi~~ag~   93 (248)
T PRK05557         82 GGVDILVNNAGI   93 (248)
T ss_pred             CCCCEEEECCCc
Confidence            468999998874

>PRK12743 oxidoreductase; Provisional

Probab=95.55  E-value=0.16  Score=44.46  Aligned_cols=81  Identities=21%  Similarity=0.226  Sum_probs=48.2

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEE-eCChhHHH----HHHHcCCC-eEEecCCC-cccHHHHHHHHHHHhCC
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIV-DVDDYRLS----VAKELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v-~~~~~~~~----~~~~~g~~-~vi~~~~~-~~~~~~~~~~~~~~~~~  253 (321)
                      ++++||+|+ +++|..+++.+...|++ |+.+ .++.++.+    .++..+.. ..+..+-. ..+..+.+.++.+. .+
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~   79 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFD-IGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQR-LG   79 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence            468999998 99999999999999995 5554 44444332    22334532 22222221 22233333443332 35


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|.+.|.
T Consensus        80 ~id~li~~ag~   90 (256)
T PRK12743         80 RIDVLVNNAGA   90 (256)
T ss_pred             CCCEEEECCCC
Confidence            78999998874

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=95.55  E-value=0.045  Score=48.87  Aligned_cols=122  Identities=21%  Similarity=0.177  Sum_probs=71.6

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-HcCCCeE-EecCCCcccHHHHHHHHHHHhCC-Ccc
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADNI-VKVSTNLQDIAEEVEKIQKAMGT-GID  256 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~g~~~v-i~~~~~~~~~~~~~~~~~~~~~~-~~d  256 (321)
                      .+|++++|+|+|+.+.+++.-++..|+.++.++.++.+|.+.+. .++.... +....        ...+   ... .+|
T Consensus       124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~--------~~~~---~~~~~~d  192 (283)
T COG0169         124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAA--------LADL---EGLEEAD  192 (283)
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccc--------cccc---ccccccC
Confidence            46899999999999999999999999888999999888866554 4442211 00000        0011   012 489


Q ss_pred             EEEEcCCCHHHHHH-----HHHHcccCCEEEEEcCCCCCccccchh-hhccc-eEEEEeehhHHH
Q 020768          257 VSFDCAGFNKTMST-----ALSATRAGGKVCLVGMGHLEMTVPLTP-AAARY-LIYSFLFHFFLI  314 (321)
Q Consensus       257 ~vid~~g~~~~~~~-----~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~k~-~~i~g~~~~~~~  314 (321)
                      ++|++++-.-....     ....+++.-.++.+-+...+  .++-. .-.++ .++-|.-|..++
T Consensus       193 liINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~~--TplL~~A~~~G~~~idGl~Mlv~Q  255 (283)
T COG0169         193 LLINATPVGMAGPEGDSPVPAELLPKGAIVYDVVYNPLE--TPLLREARAQGAKTIDGLGMLVHQ  255 (283)
T ss_pred             EEEECCCCCCCCCCCCCCCcHHhcCcCCEEEEeccCCCC--CHHHHHHHHcCCeEECcHHHHHHH
Confidence            99998875311110     03555665555555544322  22222 22223 366666665554

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=95.54  E-value=0.18  Score=44.00  Aligned_cols=82  Identities=29%  Similarity=0.349  Sum_probs=52.4

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-HcCCC-eEEecCC-CcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .+.++||+|+ |++|...++.+...|. .|+.++++.++.+.+. +++.. ..+..+- +..+..+.+.++.+. .+.+|
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id   82 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVER-FGGID   82 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH-cCCCC
Confidence            3678999998 9999999999999999 6888888877665443 34422 1122211 122333333443332 35799


Q ss_pred             EEEEcCCC
Q 020768          257 VSFDCAGF  264 (321)
Q Consensus       257 ~vid~~g~  264 (321)
                      +++.+.|.
T Consensus        83 ~li~~ag~   90 (257)
T PRK07067         83 ILFNNAAL   90 (257)
T ss_pred             EEEECCCc
Confidence            99998873

>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=95.53  E-value=0.16  Score=43.56  Aligned_cols=46  Identities=22%  Similarity=0.250  Sum_probs=38.8

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh----------hHHHHHHHcC
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD----------YRLSVAKELG  226 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~----------~~~~~~~~~g  226 (321)
                      .|.+|+|.|.|.+|..+++++...|.+.|.+++++.          +..+..++.+
T Consensus        22 ~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~   77 (217)
T cd05211          22 EGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALG   77 (217)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhhC
Confidence            578999999999999999999999997777788777          7777666554

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.52  E-value=0.36  Score=41.56  Aligned_cols=81  Identities=28%  Similarity=0.351  Sum_probs=47.6

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEE-eCChhHHHHHH-H---cCCCe-EEecCCC-cccHHHHHHHHHHHhCC
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIV-DVDDYRLSVAK-E---LGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v-~~~~~~~~~~~-~---~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~  253 (321)
                      +.++||+|+ |++|...+..+...|+ .++.+ +++.++.+.+. .   .+... ++..+-. ..+..+.+..+.+. .+
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   82 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEK-FG   82 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-hC
Confidence            468999998 9999998888878898 46666 77766544322 2   22211 2222211 12222333333222 24


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|.+.|.
T Consensus        83 ~id~vi~~ag~   93 (247)
T PRK05565         83 KIDILVNNAGI   93 (247)
T ss_pred             CCCEEEECCCc
Confidence            69999998874

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=95.52  E-value=0.055  Score=48.35  Aligned_cols=97  Identities=22%  Similarity=0.225  Sum_probs=63.0

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      ..+.+++|+|+|++|.+++..+...|+..|.++.++.++.+.+ ++++....+.+..   +..    +    .-..+|+|
T Consensus       121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~~---~~~----~----~~~~~Div  189 (278)
T PRK00258        121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELDL---ELQ----E----ELADFDLI  189 (278)
T ss_pred             CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeecc---cch----h----ccccCCEE
Confidence            3567899999999999999999999976899999988776544 4444211011100   000    1    12468999


Q ss_pred             EEcCCCHHHH-----HHHHHHcccCCEEEEEcCC
Q 020768          259 FDCAGFNKTM-----STALSATRAGGKVCLVGMG  287 (321)
Q Consensus       259 id~~g~~~~~-----~~~~~~l~~~G~~v~~g~~  287 (321)
                      |+|++....-     ......++++..++.+-+.
T Consensus       190 InaTp~g~~~~~~~~~~~~~~l~~~~~v~DivY~  223 (278)
T PRK00258        190 INATSAGMSGELPLPPLPLSLLRPGTIVYDMIYG  223 (278)
T ss_pred             EECCcCCCCCCCCCCCCCHHHcCCCCEEEEeecC
Confidence            9998753210     1223567777777777654

>PRK06114 short chain dehydrogenase; Provisional

Probab=95.51  E-value=0.2  Score=43.78  Aligned_cols=82  Identities=16%  Similarity=0.276  Sum_probs=49.5

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChh-H-HHH---HHHcCCCe-EEecCC-CcccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY-R-LSV---AKELGADN-IVKVST-NLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~-~-~~~---~~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~  252 (321)
                      .+.++||+|+ +++|..+++.+...|+ .+++++++.+ . .+.   ++..+... .+..+- +..+..+.+.++.+. .
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~   84 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAE-L   84 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            4679999998 9999999999999999 5666666543 2 222   22334221 222221 122333334443332 3


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      +.+|++|.+.|.
T Consensus        85 g~id~li~~ag~   96 (254)
T PRK06114         85 GALTLAVNAAGI   96 (254)
T ss_pred             CCCCEEEECCCC
Confidence            579999999984

>PRK08328 hypothetical protein; Provisional

Probab=95.50  E-value=0.22  Score=43.21  Aligned_cols=33  Identities=27%  Similarity=0.452  Sum_probs=29.5

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeC
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV  214 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~  214 (321)
                      +.+|+|.|+|++|..++..+...|...+..+|.
T Consensus        27 ~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~   59 (231)
T PRK08328         27 KAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDE   59 (231)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence            468999999999999999999999988888873

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=95.50  E-value=0.19  Score=44.02  Aligned_cols=95  Identities=21%  Similarity=0.284  Sum_probs=56.7

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh-------------------hHH----HHHHHcCCCeEEecCCCcc
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-------------------YRL----SVAKELGADNIVKVSTNLQ  238 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~-------------------~~~----~~~~~~g~~~vi~~~~~~~  238 (321)
                      ..+|+|.|+|++|..++..+...|...+..+|.+.                   .|.    +.++++..+.-+......-
T Consensus        32 ~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~~i  111 (245)
T PRK05690         32 AARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINARL  111 (245)
T ss_pred             CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEeccC
Confidence            47899999999999999999999998888886431                   111    2334444432222111110


Q ss_pred             cHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEE
Q 020768          239 DIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKV  281 (321)
Q Consensus       239 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~  281 (321)
                      + .+...++    -..+|+||||+.+.+....+-+.+...+.-
T Consensus       112 ~-~~~~~~~----~~~~DiVi~~~D~~~~r~~ln~~~~~~~ip  149 (245)
T PRK05690        112 D-DDELAAL----IAGHDLVLDCTDNVATRNQLNRACFAAKKP  149 (245)
T ss_pred             C-HHHHHHH----HhcCCEEEecCCCHHHHHHHHHHHHHhCCE
Confidence            1 1112222    246999999999876544444544444433

>PLN02476 O-methyltransferase

Probab=95.49  E-value=0.23  Score=44.25  Aligned_cols=107  Identities=21%  Similarity=0.244  Sum_probs=71.4

Q ss_pred             cCCCCCCEEEEEcCChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768          177 ANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      .++.+.++||=+|. .+|+.++.+|+.++ -..+++++.+++..+.++    +.|..+-+....  .+..+.+.++....
T Consensus       114 ~~~~~ak~VLEIGT-~tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~--GdA~e~L~~l~~~~  190 (278)
T PLN02476        114 VQILGAERCIEVGV-YTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKH--GLAAESLKSMIQNG  190 (278)
T ss_pred             HHhcCCCeEEEecC-CCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--cCHHHHHHHHHhcc
Confidence            45567889998886 44777777787763 226899999998877764    567654333222  34455555543221


Q ss_pred             -CCCccEEEEcCCCH---HHHHHHHHHcccCCEEEEEcC
Q 020768          252 -GTGIDVSFDCAGFN---KTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       252 -~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~  286 (321)
                       ...||+||--....   ..++.+++.|++||.++.=..
T Consensus       191 ~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~DNv  229 (278)
T PLN02476        191 EGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVMDNV  229 (278)
T ss_pred             cCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEEecC
Confidence             35799988765542   457888999999999886653

>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated

Probab=95.49  E-value=0.34  Score=40.33  Aligned_cols=101  Identities=19%  Similarity=0.283  Sum_probs=64.8

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHH
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      +....+.++++||=+|+|. |..++.+++......+++++.+++..+.+++    ++...+-....   +...   .   
T Consensus        24 ~~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~---d~~~---~---   93 (187)
T PRK08287         24 LSKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPG---EAPI---E---   93 (187)
T ss_pred             HHhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEec---Cchh---h---
Confidence            3556777889988888754 6666777776543479999999987776653    44433221111   1110   1   


Q ss_pred             HhCCCccEEEEcCCC---HHHHHHHHHHcccCCEEEEEc
Q 020768          250 AMGTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       250 ~~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  285 (321)
                       ....+|+|+.....   ...+..+.+.|+++|+++...
T Consensus        94 -~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~~  131 (187)
T PRK08287         94 -LPGKADAIFIGGSGGNLTAIIDWSLAHLHPGGRLVLTF  131 (187)
T ss_pred             -cCcCCCEEEECCCccCHHHHHHHHHHhcCCCeEEEEEE
Confidence             13469999864321   346778899999999987754

>PRK08251 short chain dehydrogenase; Provisional

Probab=95.48  E-value=0.21  Score=43.30  Aligned_cols=80  Identities=23%  Similarity=0.284  Sum_probs=49.1

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH-c-----CCC-eEEecCCC-cccHHHHHHHHHHHhC
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-L-----GAD-NIVKVSTN-LQDIAEEVEKIQKAMG  252 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~-~-----g~~-~vi~~~~~-~~~~~~~~~~~~~~~~  252 (321)
                      +.+++|+|+ |++|...++.+...|. .|+.+++++++.+.+.. +     +.. ..+..+-. ..+..+.+.++... .
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   79 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDE-L   79 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            468999998 9999988888888898 67777787766543321 1     211 12222211 22333333433322 3


Q ss_pred             CCccEEEEcCC
Q 020768          253 TGIDVSFDCAG  263 (321)
Q Consensus       253 ~~~d~vid~~g  263 (321)
                      +++|++|.+.|
T Consensus        80 ~~id~vi~~ag   90 (248)
T PRK08251         80 GGLDRVIVNAG   90 (248)
T ss_pred             CCCCEEEECCC
Confidence            57999999987

>PRK06125 short chain dehydrogenase; Provisional

Probab=95.48  E-value=0.18  Score=44.19  Aligned_cols=79  Identities=27%  Similarity=0.334  Sum_probs=49.8

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-Hc----CCC-eEEecCCCcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-EL----GAD-NIVKVSTNLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~----g~~-~vi~~~~~~~~~~~~~~~~~~~~~~  253 (321)
                      .+.+++|+|+ +++|...++.+...|+ .|++++++.++.+.+. ++    +.. ..+..+-  .+. +.+.++.+. -+
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~--~~~-~~~~~~~~~-~g   80 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDL--SSP-EAREQLAAE-AG   80 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecC--CCH-HHHHHHHHH-hC
Confidence            4689999998 9999999998888999 6888888776654322 22    221 1222221  121 223332222 25


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      .+|++|.+.|.
T Consensus        81 ~id~lv~~ag~   91 (259)
T PRK06125         81 DIDILVNNAGA   91 (259)
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=95.48  E-value=0.27  Score=44.13  Aligned_cols=132  Identities=20%  Similarity=0.280  Sum_probs=75.4

Q ss_pred             CCcEEECCCCCChhhhccchhhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH-
Q 020768          146 ADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-  224 (321)
Q Consensus       146 ~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~-  224 (321)
                      ...++.+.+++.|-....-.+.. .+.+++. ..++|.+||=+|+|. |.+++. |..+|+..++++|-++...+.+++ 
T Consensus       129 ~~~~i~lDPGlAFGTG~HpTT~l-cL~~Le~-~~~~g~~vlDvGcGS-GILaIA-a~kLGA~~v~g~DiDp~AV~aa~eN  204 (300)
T COG2264         129 DELNIELDPGLAFGTGTHPTTSL-CLEALEK-LLKKGKTVLDVGCGS-GILAIA-AAKLGAKKVVGVDIDPQAVEAAREN  204 (300)
T ss_pred             CceEEEEccccccCCCCChhHHH-HHHHHHH-hhcCCCEEEEecCCh-hHHHHH-HHHcCCceEEEecCCHHHHHHHHHH
Confidence            45667777777554322111111 1233333 345899998888844 555554 345788889999999876666553 


Q ss_pred             ---cCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCH---HHHHHHHHHcccCCEEEEEcCCCC
Q 020768          225 ---LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFN---KTMSTALSATRAGGKVCLVGMGHL  289 (321)
Q Consensus       225 ---~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~~~~  289 (321)
                         -+....+...        .........++.+|+|+-+.=..   ...+.+...++++|++++-|....
T Consensus       205 a~~N~v~~~~~~~--------~~~~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpgg~lIlSGIl~~  267 (300)
T COG2264         205 ARLNGVELLVQAK--------GFLLLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPGGRLILSGILED  267 (300)
T ss_pred             HHHcCCchhhhcc--------cccchhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCCceEEEEeehHh
Confidence               2232100000        00000011145799999654321   245677789999999999996543

>PRK05876 short chain dehydrogenase; Provisional

Probab=95.47  E-value=0.19  Score=44.65  Aligned_cols=82  Identities=29%  Similarity=0.350  Sum_probs=51.0

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HH---cCCCe-EEecCC-CcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~---~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      .+.++||+|+ |++|...+..+...|+ .|++++++.++.+.+ ++   .+... .+..+- +..+..+.+.+..+. .+
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g   82 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRL-LG   82 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHH-cC
Confidence            4678999998 9999999999989999 577777776554432 22   23321 122221 122333333333322 35


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      .+|++|.+.|-
T Consensus        83 ~id~li~nAg~   93 (275)
T PRK05876         83 HVDVVFSNAGI   93 (275)
T ss_pred             CCCEEEECCCc
Confidence            69999999883

>PRK06141 ornithine cyclodeaminase; Validated

Probab=95.47  E-value=0.42  Score=43.54  Aligned_cols=113  Identities=18%  Similarity=0.132  Sum_probs=69.9

Q ss_pred             HHcCCCCCCEEEEEcCChhHHHHHHHHH-HcCCCeEEEEeCChhHHH-HHHHc---CCCeEEecCCCcccHHHHHHHHHH
Q 020768          175 RRANIGPETNVLIMGAGPIGLVTMLGAR-AFGAPRIVIVDVDDYRLS-VAKEL---GADNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~-~~g~~~vv~v~~~~~~~~-~~~~~---g~~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      +...-....+++|+|+|..|...+..+. ..+...|.+.+++.++.+ +++++   |.. +...    .+..+.+     
T Consensus       118 ~~La~~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~-~~~~----~~~~~av-----  187 (314)
T PRK06141        118 SYLARKDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFD-AEVV----TDLEAAV-----  187 (314)
T ss_pred             HHhCCCCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCc-eEEe----CCHHHHH-----
Confidence            4444456789999999999999886444 467778889888877755 44444   322 1111    1111111     


Q ss_pred             HhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-Cccccchhhhccc
Q 020768          250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARY  302 (321)
Q Consensus       250 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~  302 (321)
                         .+.|+|+.+++.+..+ ---+.++++-.+..+|.... ..+++.. ++.+.
T Consensus       188 ---~~aDIVi~aT~s~~pv-l~~~~l~~g~~i~~ig~~~~~~~El~~~-~~~~a  236 (314)
T PRK06141        188 ---RQADIISCATLSTEPL-VRGEWLKPGTHLDLVGNFTPDMRECDDE-AIRRA  236 (314)
T ss_pred             ---hcCCEEEEeeCCCCCE-ecHHHcCCCCEEEeeCCCCcccccCCHH-HHhcC
Confidence               3589999988875321 11267888888888885433 3456644 33344

>TIGR00138 gidB 16S rRNA methyltransferase GidB

Probab=95.47  E-value=0.14  Score=42.55  Aligned_cols=95  Identities=20%  Similarity=0.254  Sum_probs=59.3

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      ++++||=+|+|. |..++.+++......|++++.+++..++++    +.+.+.+.....   +..+    +.  ....+|
T Consensus        42 ~~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~~---d~~~----~~--~~~~fD  111 (181)
T TIGR00138        42 DGKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIVNG---RAED----FQ--HEEQFD  111 (181)
T ss_pred             CCCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEec---chhh----cc--ccCCcc
Confidence            378888888743 455556565554347999999987665543    456543322211   2111    11  135799


Q ss_pred             EEEEcCC-C-HHHHHHHHHHcccCCEEEEEc
Q 020768          257 VSFDCAG-F-NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       257 ~vid~~g-~-~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      +|+-..- . +..++.+.+.|+++|+++..-
T Consensus       112 ~I~s~~~~~~~~~~~~~~~~LkpgG~lvi~~  142 (181)
T TIGR00138       112 VITSRALASLNVLLELTLNLLKVGGYFLAYK  142 (181)
T ss_pred             EEEehhhhCHHHHHHHHHHhcCCCCEEEEEc
Confidence            9886531 1 346677889999999999874

GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.

>PRK07856 short chain dehydrogenase; Provisional

Probab=95.46  E-value=0.15  Score=44.36  Aligned_cols=78  Identities=22%  Similarity=0.197  Sum_probs=48.8

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCC-eEEecCC-CcccHHHHHHHHHHHhCCCccE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      .+.++||+|+ |++|...++.+...|. .|+.++++.++    +..+.. ..+..+- +..+..+.+..+.+. .+.+|+
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~   78 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRDPDQVAALVDAIVER-HGRLDV   78 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCCHHHHHHHHHHHHHH-cCCCCE
Confidence            4789999998 9999999999988999 57777777654    112211 1222221 122333333333332 357899


Q ss_pred             EEEcCCC
Q 020768          258 SFDCAGF  264 (321)
Q Consensus       258 vid~~g~  264 (321)
                      +|.+.|.
T Consensus        79 vi~~ag~   85 (252)
T PRK07856         79 LVNNAGG   85 (252)
T ss_pred             EEECCCC
Confidence            9999873

>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]

Probab=95.46  E-value=0.24  Score=44.26  Aligned_cols=98  Identities=17%  Similarity=0.156  Sum_probs=66.0

Q ss_pred             CEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHc-CCCeEEecCCC----cccHHHHHHHHHHHhCCCccE
Q 020768          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL-GADNIVKVSTN----LQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~-g~~~vi~~~~~----~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      .+|||+|+|. |-.+-.++++....+++.++-+++-.++++++ +....-..+.+    ..|-.+.+++    ...++|+
T Consensus        78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~----~~~~fDv  152 (282)
T COG0421          78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRD----CEEKFDV  152 (282)
T ss_pred             CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHh----CCCcCCE
Confidence            5999997543 55666788888888999999999999999873 32221111111    1233344433    2347999


Q ss_pred             EEEcCCC----------HHHHHHHHHHcccCCEEEEEc
Q 020768          258 SFDCAGF----------NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       258 vid~~g~----------~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      +|--+..          .+.++.+.++|+++|.++.-+
T Consensus       153 Ii~D~tdp~gp~~~Lft~eFy~~~~~~L~~~Gi~v~q~  190 (282)
T COG0421         153 IIVDSTDPVGPAEALFTEEFYEGCRRALKEDGIFVAQA  190 (282)
T ss_pred             EEEcCCCCCCcccccCCHHHHHHHHHhcCCCcEEEEec
Confidence            8864433          356889999999999998874

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=95.45  E-value=0.18  Score=43.55  Aligned_cols=98  Identities=24%  Similarity=0.297  Sum_probs=63.9

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      -+|.+||=.|||+ |+++.-+|+ +|+ .|.++|-+++-.+.++......-+..+.. ...   +.++.. .++.||+|+
T Consensus        58 l~g~~vLDvGCGg-G~Lse~mAr-~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~-~~~---~edl~~-~~~~FDvV~  129 (243)
T COG2227          58 LPGLRVLDVGCGG-GILSEPLAR-LGA-SVTGIDASEKPIEVAKLHALESGVNIDYR-QAT---VEDLAS-AGGQFDVVT  129 (243)
T ss_pred             CCCCeEEEecCCc-cHhhHHHHH-CCC-eeEEecCChHHHHHHHHhhhhccccccch-hhh---HHHHHh-cCCCccEEE
Confidence            3788898889854 566666655 567 79999999999998885443322221111 122   223322 247899997


Q ss_pred             E-----cCCCHH-HHHHHHHHcccCCEEEEEc
Q 020768          260 D-----CAGFNK-TMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       260 d-----~~g~~~-~~~~~~~~l~~~G~~v~~g  285 (321)
                      .     .+..++ .+..+.++++|+|.+++--
T Consensus       130 cmEVlEHv~dp~~~~~~c~~lvkP~G~lf~ST  161 (243)
T COG2227         130 CMEVLEHVPDPESFLRACAKLVKPGGILFLST  161 (243)
T ss_pred             EhhHHHccCCHHHHHHHHHHHcCCCcEEEEec
Confidence            5     455544 5668999999999877654

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=95.45  E-value=0.37  Score=45.26  Aligned_cols=106  Identities=24%  Similarity=0.303  Sum_probs=60.1

Q ss_pred             CCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHH-------HHHHcCCCeEEecCCCcccHHHHHHHHHH
Q 020768          178 NIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-------VAKELGADNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       178 ~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~-------~~~~~g~~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      +...+.+|||+|+ |.+|..++..+...|. .|++++++.++.+       ......-..++..+-.  + .+.+.++.+
T Consensus        56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~--d-~~~l~~~~~  131 (390)
T PLN02657         56 KEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVT--D-ADSLRKVLF  131 (390)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCC--C-HHHHHHHHH
Confidence            3456779999998 9999999999988998 5777777654321       1112211122222111  1 122333322


Q ss_pred             HhCCCccEEEEcCCCH-----H-------HHHHHHHHcccC--CEEEEEcCC
Q 020768          250 AMGTGIDVSFDCAGFN-----K-------TMSTALSATRAG--GKVCLVGMG  287 (321)
Q Consensus       250 ~~~~~~d~vid~~g~~-----~-------~~~~~~~~l~~~--G~~v~~g~~  287 (321)
                      ..+.++|+||.|.+..     +       ....+++.+...  ++++.++..
T Consensus       132 ~~~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~  183 (390)
T PLN02657        132 SEGDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAI  183 (390)
T ss_pred             HhCCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeec
Confidence            1122799999988642     0       122344544443  478888754

>PRK14103 trans-aconitate 2-methyltransferase; Provisional

Probab=95.44  E-value=0.24  Score=43.52  Aligned_cols=97  Identities=23%  Similarity=0.273  Sum_probs=68.0

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHc-CCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhC
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~-g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~  252 (321)
                      +.....+++++||=+|+|. |..+..+++.. +. .+++++.+++-.+.+++.+.+.+.      .+.    .++.  ..
T Consensus        22 l~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~------~d~----~~~~--~~   87 (255)
T PRK14103         22 LARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART------GDV----RDWK--PK   87 (255)
T ss_pred             HHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE------cCh----hhCC--CC
Confidence            4556678889999899865 67777888775 44 799999999998888876654321      111    1111  13


Q ss_pred             CCccEEEEcCC-----C-HHHHHHHHHHcccCCEEEEE
Q 020768          253 TGIDVSFDCAG-----F-NKTMSTALSATRAGGKVCLV  284 (321)
Q Consensus       253 ~~~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~  284 (321)
                      ..||+|+-...     . ...+..+.+.|++||++++.
T Consensus        88 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~  125 (255)
T PRK14103         88 PDTDVVVSNAALQWVPEHADLLVRWVDELAPGSWIAVQ  125 (255)
T ss_pred             CCceEEEEehhhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence            57999997442     2 34677888999999999875

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=95.44  E-value=0.17  Score=42.74  Aligned_cols=99  Identities=15%  Similarity=0.197  Sum_probs=62.0

Q ss_pred             HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHH
Q 020768          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKA  250 (321)
Q Consensus       175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~~  250 (321)
                      +.....++.+||-+|+|. |..+..+++. |. .|++++.+++-.+.+++    .+...+....   .++.    ++.  
T Consensus        24 ~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~~---~d~~----~~~--   91 (197)
T PRK11207         24 EAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNLHTAV---VDLN----NLT--   91 (197)
T ss_pred             HhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcceEEe---cChh----hCC--
Confidence            334556778999999865 6777778775 66 79999999877666553    2332111100   1111    110  


Q ss_pred             hCCCccEEEEcCC----C----HHHHHHHHHHcccCCEEEEEc
Q 020768          251 MGTGIDVSFDCAG----F----NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       251 ~~~~~d~vid~~g----~----~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      ....+|+|+....    .    ...+..+.+.|+++|.++.+.
T Consensus        92 ~~~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~  134 (197)
T PRK11207         92 FDGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA  134 (197)
T ss_pred             cCCCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            1346999997533    1    246778889999999965543

>PRK04266 fibrillarin; Provisional

Probab=95.44  E-value=0.36  Score=41.72  Aligned_cols=103  Identities=16%  Similarity=0.197  Sum_probs=60.8

Q ss_pred             HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcC--CCeEEecCCCcccHHHHHHHHHHHhC
Q 020768          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG--ADNIVKVSTNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g--~~~vi~~~~~~~~~~~~~~~~~~~~~  252 (321)
                      +...+++|++||=.|+|. |..+..+++..+...|++++.+++..+.+.+.-  ...+.....+..+.. ....+    .
T Consensus        66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~~~~-~~~~l----~  139 (226)
T PRK04266         66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADARKPE-RYAHV----V  139 (226)
T ss_pred             hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCCCcc-hhhhc----c
Confidence            557899999988888743 444555666654337999999997766443221  111211111111110 00111    2


Q ss_pred             CCccEEEEcCCCHH----HHHHHHHHcccCCEEEE
Q 020768          253 TGIDVSFDCAGFNK----TMSTALSATRAGGKVCL  283 (321)
Q Consensus       253 ~~~d~vid~~g~~~----~~~~~~~~l~~~G~~v~  283 (321)
                      ..+|+++-....+.    .++.+.+.|++||+++.
T Consensus       140 ~~~D~i~~d~~~p~~~~~~L~~~~r~LKpGG~lvI  174 (226)
T PRK04266        140 EKVDVIYQDVAQPNQAEIAIDNAEFFLKDGGYLLL  174 (226)
T ss_pred             ccCCEEEECCCChhHHHHHHHHHHHhcCCCcEEEE
Confidence            34999995444332    36788889999999988

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.43  E-value=0.19  Score=37.55  Aligned_cols=89  Identities=18%  Similarity=0.271  Sum_probs=59.3

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      .|.+|||+|+|.+|..-++.+...|+ .+.+++...   +..+  +.-....     ..+.+        .-.++|+|+-
T Consensus         6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~~-----~~~~~--------~l~~~~lV~~   66 (103)
T PF13241_consen    6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLIR-----REFEE--------DLDGADLVFA   66 (103)
T ss_dssp             TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEEE-----SS-GG--------GCTTESEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHHh-----hhHHH--------HHhhheEEEe
Confidence            47899999999999999999999998 577776664   2222  2212221     11111        1356899999


Q ss_pred             cCCCHHHHHHHHHHcccCCEEEEEcCCC
Q 020768          261 CAGFNKTMSTALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~  288 (321)
                      +.+++..-+.+....+..|.++.+....
T Consensus        67 at~d~~~n~~i~~~a~~~~i~vn~~D~p   94 (103)
T PF13241_consen   67 ATDDPELNEAIYADARARGILVNVVDDP   94 (103)
T ss_dssp             -SS-HHHHHHHHHHHHHTTSEEEETT-C
T ss_pred             cCCCHHHHHHHHHHHhhCCEEEEECCCc
Confidence            9998776667777788899999887543

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=95.43  E-value=0.22  Score=43.47  Aligned_cols=82  Identities=18%  Similarity=0.255  Sum_probs=50.1

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChh--HHHHHHHcCCCe-EEecCC-CcccHHHHHHHHHHHhCCCc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY--RLSVAKELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI  255 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~--~~~~~~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~~  255 (321)
                      .|.++||+|+ |++|...++.+...|+ .|+.++.+..  ..+.+++.+... .+..+- +.++..+.+.++.+. .+++
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~~   86 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAE-FGHI   86 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-hCCC
Confidence            3679999998 9999999999999999 5666654432  223334444321 122221 122333344444332 3579


Q ss_pred             cEEEEcCCC
Q 020768          256 DVSFDCAGF  264 (321)
Q Consensus       256 d~vid~~g~  264 (321)
                      |++|.+.|.
T Consensus        87 D~li~~Ag~   95 (253)
T PRK08993         87 DILVNNAGL   95 (253)
T ss_pred             CEEEECCCC
Confidence            999999884

>PRK07574 formate dehydrogenase; Provisional

Probab=95.39  E-value=0.15  Score=47.76  Aligned_cols=89  Identities=21%  Similarity=0.276  Sum_probs=58.4

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      .|.+|.|+|.|.+|...++.++.+|. .|.+.+++....+..+.+|+...       .+    +.++.    ...|+|+.
T Consensus       191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g~~~~-------~~----l~ell----~~aDvV~l  254 (385)
T PRK07574        191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELGLTYH-------VS----FDSLV----SVCDVVTI  254 (385)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcCceec-------CC----HHHHh----hcCCEEEE
Confidence            46789999999999999999999999 68888877644444445553211       11    22221    34678877


Q ss_pred             cCCCHHH----H-HHHHHHcccCCEEEEEc
Q 020768          261 CAGFNKT----M-STALSATRAGGKVCLVG  285 (321)
Q Consensus       261 ~~g~~~~----~-~~~~~~l~~~G~~v~~g  285 (321)
                      +......    + ...+..++++..++.++
T Consensus       255 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~a  284 (385)
T PRK07574        255 HCPLHPETEHLFDADVLSRMKRGSYLVNTA  284 (385)
T ss_pred             cCCCCHHHHHHhCHHHHhcCCCCcEEEECC
Confidence            7764321    1 24566777777777766

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=95.38  E-value=0.26  Score=43.01  Aligned_cols=101  Identities=19%  Similarity=0.199  Sum_probs=58.0

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCC-CeEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA-DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~-~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      .+.+|||+|+ |.+|...+..+...|. .|+++.++.++.......+. -.++..+-  .+..+.+.+   ..+.++|+|
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl--~d~~~~l~~---~~~~~~d~v   89 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADV--TEGSDKLVE---AIGDDSDAV   89 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeC--CCCHHHHHH---HhhcCCCEE
Confidence            4578999998 9999999988888888 57777777665433221111 11221111  111112212   112479999


Q ss_pred             EEcCCCHH-------------HHHHHHHHcccC--CEEEEEcCC
Q 020768          259 FDCAGFNK-------------TMSTALSATRAG--GKVCLVGMG  287 (321)
Q Consensus       259 id~~g~~~-------------~~~~~~~~l~~~--G~~v~~g~~  287 (321)
                      |.+.|...             ....+++.+...  ++++.++..
T Consensus        90 i~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~  133 (251)
T PLN00141         90 ICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI  133 (251)
T ss_pred             EECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence            99876421             123445554433  688888754

>PRK08300 acetaldehyde dehydrogenase; Validated

Probab=95.37  E-value=0.18  Score=45.41  Aligned_cols=94  Identities=22%  Similarity=0.229  Sum_probs=59.7

Q ss_pred             CEEEEEcCChhHHH-HHHHHHHcCCCeEEEEeCChh--HHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          183 TNVLIMGAGPIGLV-TMLGARAFGAPRIVIVDVDDY--RLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       183 ~~vlI~Gag~vG~~-a~qla~~~g~~~vv~v~~~~~--~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      -++.|+|.|.+|.. +..+.+.-+.+.+.+++.+++  .+++++++|.....      .++.+.+..   .....+|+||
T Consensus         5 lrVAIIGtG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~~Gi~~~~------~~ie~LL~~---~~~~dIDiVf   75 (302)
T PRK08300          5 LKVAIIGSGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARRLGVATSA------EGIDGLLAM---PEFDDIDIVF   75 (302)
T ss_pred             CeEEEEcCcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHHcCCCccc------CCHHHHHhC---cCCCCCCEEE
Confidence            47899999999986 444444446655555666554  34667888864321      122222211   0125699999


Q ss_pred             EcCCCHHHHHHHHHHcccCCEEEEEc
Q 020768          260 DCAGFNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       260 d~~g~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      ++++...+.+.+..++..|-.++...
T Consensus        76 ~AT~a~~H~e~a~~a~eaGk~VID~s  101 (302)
T PRK08300         76 DATSAGAHVRHAAKLREAGIRAIDLT  101 (302)
T ss_pred             ECCCHHHHHHHHHHHHHcCCeEEECC
Confidence            99998877777777777766666655

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=95.36  E-value=0.077  Score=45.62  Aligned_cols=106  Identities=16%  Similarity=0.147  Sum_probs=61.9

Q ss_pred             cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCeEEe-------cCCCccc-HHHHHHHH
Q 020768          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVK-------VSTNLQD-IAEEVEKI  247 (321)
Q Consensus       177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~vi~-------~~~~~~~-~~~~~~~~  247 (321)
                      ....++.+||+.|+|. |.-++.+|. .|+ .|++++-++...+.+ ++.+......       +....-+ +...+.++
T Consensus        33 ~~~~~~~rvL~~gCG~-G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l  109 (218)
T PRK13255         33 LALPAGSRVLVPLCGK-SLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFAL  109 (218)
T ss_pred             hCCCCCCeEEEeCCCC-hHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCC
Confidence            3446778999999854 677777775 798 699999999887764 3444321100       0000000 00001111


Q ss_pred             HHHhCCCccEEEEcCC--------CHHHHHHHHHHcccCCEEEEEc
Q 020768          248 QKAMGTGIDVSFDCAG--------FNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       248 ~~~~~~~~d~vid~~g--------~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      .......+|.|+|..-        ....+..+.++|++||+++++.
T Consensus       110 ~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~~  155 (218)
T PRK13255        110 TAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLVT  155 (218)
T ss_pred             CcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEEE
Confidence            1011246899998552        1245888999999999755543

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=95.36  E-value=0.29  Score=43.41  Aligned_cols=102  Identities=15%  Similarity=0.293  Sum_probs=60.3

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh-------------------hH----HHHHHHcCCCe-EEecCCC
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-------------------YR----LSVAKELGADN-IVKVSTN  236 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~-------------------~~----~~~~~~~g~~~-vi~~~~~  236 (321)
                      .+.+|+|.|+|++|..++..+-..|...+..+|.+.                   .|    .+.++++.++. +..++..
T Consensus        29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~  108 (268)
T PRK15116         29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDF  108 (268)
T ss_pred             cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecc
Confidence            457899999999999999999999987888887541                   11    12233444332 2222111


Q ss_pred             cccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCC-EEEEEcCC
Q 020768          237 LQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGG-KVCLVGMG  287 (321)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G-~~v~~g~~  287 (321)
                      - + .+...++   ....+|+||||..+...-..+.+.+...+ .++..|..
T Consensus       109 i-~-~e~~~~l---l~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gGa  155 (268)
T PRK15116        109 I-T-PDNVAEY---MSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGA  155 (268)
T ss_pred             c-C-hhhHHHH---hcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECCc
Confidence            0 0 1122222   13469999999998555444555554444 45555544

>PRK06914 short chain dehydrogenase; Provisional

Probab=95.36  E-value=0.21  Score=44.30  Aligned_cols=80  Identities=18%  Similarity=0.254  Sum_probs=49.4

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCC---eEEecCC-CcccHHHHHHHHHHHhC
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGAD---NIVKVST-NLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~---~vi~~~~-~~~~~~~~~~~~~~~~~  252 (321)
                      +.++||+|+ |++|...+..+...|+ .|++++++.++.+.+.    ..+..   ..+..+- +.++..+ +.++.+. .
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~-~   79 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKE-I   79 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHh-c
Confidence            568999998 9999999998888898 5777777766544332    22221   1222221 1222333 4333322 3


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      +++|+++.+.|.
T Consensus        80 ~~id~vv~~ag~   91 (280)
T PRK06914         80 GRIDLLVNNAGY   91 (280)
T ss_pred             CCeeEEEECCcc
Confidence            578999999874

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.35  E-value=0.34  Score=39.34  Aligned_cols=89  Identities=15%  Similarity=0.105  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      .|.+|+|.|+|.+|..-++.+...|+. |.+++  ++..+.+++++.-...   .  ..+.       +..-.++|+|+-
T Consensus        12 ~~~~vlVvGGG~va~rka~~Ll~~ga~-V~VIs--p~~~~~l~~l~~i~~~---~--~~~~-------~~dl~~a~lVia   76 (157)
T PRK06719         12 HNKVVVIIGGGKIAYRKASGLKDTGAF-VTVVS--PEICKEMKELPYITWK---Q--KTFS-------NDDIKDAHLIYA   76 (157)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEc--CccCHHHHhccCcEEE---e--cccC-------hhcCCCceEEEE
Confidence            478999999999999988888888984 55553  3333334445421111   1  1111       111256899999


Q ss_pred             cCCCHHHHHHHHHHcccCCEEEEEc
Q 020768          261 CAGFNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      ++++++ .+..+..++..+.++...
T Consensus        77 aT~d~e-~N~~i~~~a~~~~~vn~~  100 (157)
T PRK06719         77 ATNQHA-VNMMVKQAAHDFQWVNVV  100 (157)
T ss_pred             CCCCHH-HHHHHHHHHHHCCcEEEC
Confidence            998754 454444443333344433

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=95.34  E-value=0.32  Score=41.21  Aligned_cols=34  Identities=26%  Similarity=0.490  Sum_probs=30.0

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~  215 (321)
                      ..+|+|.|+|++|..+++.+...|...+..+|.+
T Consensus        21 ~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        21 QATVAICGLGGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             CCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            4789999999999999999999999778888766

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK01683 trans-aconitate 2-methyltransferase; Provisional

Probab=95.32  E-value=0.31  Score=42.83  Aligned_cols=100  Identities=26%  Similarity=0.275  Sum_probs=67.2

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCC-eEEecCCCcccHHHHHHHHHHHhC
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD-NIVKVSTNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~~~~~~~~~~~  252 (321)
                      +....++++++||=+|+|. |..+..+++..+...+++++.+++..+.+++.-.. .++.     .+..    .+.  ..
T Consensus        24 l~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~-----~d~~----~~~--~~   91 (258)
T PRK01683         24 LARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVE-----ADIA----SWQ--PP   91 (258)
T ss_pred             HhhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEE-----Cchh----ccC--CC
Confidence            3455678889999998854 66677888876544899999999988888764321 1222     1111    111  13


Q ss_pred             CCccEEEEcCC-----C-HHHHHHHHHHcccCCEEEEEc
Q 020768          253 TGIDVSFDCAG-----F-NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       253 ~~~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      ..+|+|+-...     . ...+..+.+.|++||.+++..
T Consensus        92 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~~~~~~  130 (258)
T PRK01683         92 QALDLIFANASLQWLPDHLELFPRLVSLLAPGGVLAVQM  130 (258)
T ss_pred             CCccEEEEccChhhCCCHHHHHHHHHHhcCCCcEEEEEC
Confidence            47899886433     1 246888899999999988753

>PRK07069 short chain dehydrogenase; Validated

Probab=95.29  E-value=0.35  Score=41.87  Aligned_cols=101  Identities=21%  Similarity=0.278  Sum_probs=59.2

Q ss_pred             EEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCC-hhHHHHH-HHc----CCCeE--E--ecCCCcccHHHHHHHHHHHhC
Q 020768          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD-DYRLSVA-KEL----GADNI--V--KVSTNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       184 ~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~-~~~~~~~-~~~----g~~~v--i--~~~~~~~~~~~~~~~~~~~~~  252 (321)
                      +++|+|+ |++|...++.+...|+ .|++++++ .++.+.+ +++    +...+  +  |.. +.+.+.+.+.++.+. .
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~-~   77 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGA-KVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVT-DEAQWQALLAQAADA-M   77 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecC-CHHHHHHHHHHHHHH-c
Confidence            3789988 9999999988888899 57777765 4444332 222    11111  1  222 223333333333322 3


Q ss_pred             CCccEEEEcCCCHH-------------------------HHHHHHHHccc--CCEEEEEcCC
Q 020768          253 TGIDVSFDCAGFNK-------------------------TMSTALSATRA--GGKVCLVGMG  287 (321)
Q Consensus       253 ~~~d~vid~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~  287 (321)
                      +++|+++.+.|...                         ..+.++..++.  .|+++.++..
T Consensus        78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~  139 (251)
T PRK07069         78 GGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSV  139 (251)
T ss_pred             CCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecCh
Confidence            56999999987421                         22345555543  4789888854

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.28  E-value=0.48  Score=35.90  Aligned_cols=93  Identities=18%  Similarity=0.153  Sum_probs=61.9

Q ss_pred             EEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCC
Q 020768          185 VLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGF  264 (321)
Q Consensus       185 vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  264 (321)
                      |+|.|.|.+|...++.++..+. .+++++.++++.+.+++.|.. ++.-+..+   .+.+++   .+-..+|.++-+.++
T Consensus         1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~~~---~~~l~~---a~i~~a~~vv~~~~~   72 (116)
T PF02254_consen    1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDATD---PEVLER---AGIEKADAVVILTDD   72 (116)
T ss_dssp             EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-TTS---HHHHHH---TTGGCESEEEEESSS
T ss_pred             eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccchh---hhHHhh---cCccccCEEEEccCC
Confidence            5788999999999999999664 799999999999999988854 44322222   222332   233568999988887


Q ss_pred             HHHHH---HHHHHcccCCEEEEEc
Q 020768          265 NKTMS---TALSATRAGGKVCLVG  285 (321)
Q Consensus       265 ~~~~~---~~~~~l~~~G~~v~~g  285 (321)
                      +..-.   ..++-+.+..+++...
T Consensus        73 d~~n~~~~~~~r~~~~~~~ii~~~   96 (116)
T PF02254_consen   73 DEENLLIALLARELNPDIRIIARV   96 (116)
T ss_dssp             HHHHHHHHHHHHHHTTTSEEEEEE
T ss_pred             HHHHHHHHHHHHHHCCCCeEEEEE
Confidence            54322   2334455666766554

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=95.27  E-value=0.28  Score=42.32  Aligned_cols=82  Identities=23%  Similarity=0.272  Sum_probs=50.9

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCe-EEecCC-CcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .+.++||+|+ |++|...+..+...|. .|+..+++.++.+.+ ..++... .+..+- +.....+.+.++.+. .+++|
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id   82 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEAD-LEGVD   82 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH-cCCCC
Confidence            3679999998 9999999988888898 677776766655543 3444321 222221 122233333333322 35799


Q ss_pred             EEEEcCCC
Q 020768          257 VSFDCAGF  264 (321)
Q Consensus       257 ~vid~~g~  264 (321)
                      .+|.+.|.
T Consensus        83 ~vi~~ag~   90 (245)
T PRK12936         83 ILVNNAGI   90 (245)
T ss_pred             EEEECCCC
Confidence            99999884

>PRK06523 short chain dehydrogenase; Provisional

Probab=95.25  E-value=0.18  Score=44.11  Aligned_cols=76  Identities=20%  Similarity=0.229  Sum_probs=47.0

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCC-eEEecCCC-cccHHHHHHHHHHHhCCCccE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~-~vi~~~~~-~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      .|.++||+|+ |++|...++.+...|+ .|++++++.++.     .+.. ..+..+-. ..+..+.+.++.+. .+++|+
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~   80 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDD-----LPEGVEFVAADLTTAEGCAAVARAVLER-LGGVDI   80 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhh-----cCCceeEEecCCCCHHHHHHHHHHHHHH-cCCCCE
Confidence            4789999998 9999999999888999 577777765432     1111 11221111 12222233333222 357999


Q ss_pred             EEEcCC
Q 020768          258 SFDCAG  263 (321)
Q Consensus       258 vid~~g  263 (321)
                      +|.+.|
T Consensus        81 vi~~ag   86 (260)
T PRK06523         81 LVHVLG   86 (260)
T ss_pred             EEECCc
Confidence            999987

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=95.24  E-value=0.24  Score=43.46  Aligned_cols=81  Identities=16%  Similarity=0.145  Sum_probs=47.9

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEe-CChhHHHH-HHH----cCCC-eEEecCC-CcccHHHHHHHHHHHh
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVD-VDDYRLSV-AKE----LGAD-NIVKVST-NLQDIAEEVEKIQKAM  251 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~-~~~~~~~~-~~~----~g~~-~vi~~~~-~~~~~~~~~~~~~~~~  251 (321)
                      .++++||+|+ +++|...+..+...|++ |+.+. ++.++.+. +++    .+.. ..+..+- +.++..+.+.++.+. 
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-   84 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGVN-IAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDED-   84 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh-
Confidence            4789999998 99999999998899995 55553 44444332 222    2322 1222221 222333333433322 


Q ss_pred             CCCccEEEEcCC
Q 020768          252 GTGIDVSFDCAG  263 (321)
Q Consensus       252 ~~~~d~vid~~g  263 (321)
                      .+.+|+++.+.|
T Consensus        85 ~g~id~lv~nAg   96 (260)
T PRK08416         85 FDRVDFFISNAI   96 (260)
T ss_pred             cCCccEEEECcc
Confidence            357999999885

>PRK12744 short chain dehydrogenase; Provisional

Probab=95.24  E-value=0.48  Score=41.37  Aligned_cols=83  Identities=18%  Similarity=0.171  Sum_probs=45.9

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCC---hhHH-HH---HHHcCCCe-EEecCC-CcccHHHHHHHHHHH
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD---DYRL-SV---AKELGADN-IVKVST-NLQDIAEEVEKIQKA  250 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~---~~~~-~~---~~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~  250 (321)
                      .+.++||+|+ |++|...++.+...|++.++...+.   .++. +.   ++..+... .+..+- +.++..+.+.++.+.
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA   86 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence            3678999998 9999999999988999534333221   1222 12   22234321 122221 122223333333222


Q ss_pred             hCCCccEEEEcCCC
Q 020768          251 MGTGIDVSFDCAGF  264 (321)
Q Consensus       251 ~~~~~d~vid~~g~  264 (321)
                       .+++|++|.+.|.
T Consensus        87 -~~~id~li~~ag~   99 (257)
T PRK12744         87 -FGRPDIAINTVGK   99 (257)
T ss_pred             -hCCCCEEEECCcc
Confidence             3579999999885

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=95.23  E-value=0.23  Score=42.91  Aligned_cols=92  Identities=24%  Similarity=0.295  Sum_probs=55.8

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh-------------------hH----HHHHHHcCCCeEEecCCCcc
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-------------------YR----LSVAKELGADNIVKVSTNLQ  238 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~-------------------~~----~~~~~~~g~~~vi~~~~~~~  238 (321)
                      ..+|+|.|+|++|..++..+...|...+..+|.+.                   .|    .+.++++..+.-+....  .
T Consensus        21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~--~   98 (228)
T cd00757          21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYN--E   98 (228)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEec--c
Confidence            57899999999999999999999998888775331                   12    22334444432222111  1


Q ss_pred             cH-HHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCC
Q 020768          239 DI-AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGG  279 (321)
Q Consensus       239 ~~-~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G  279 (321)
                      .+ .+.+.++    -.++|+||+|..+...-..+-+.+...+
T Consensus        99 ~i~~~~~~~~----~~~~DvVi~~~d~~~~r~~l~~~~~~~~  136 (228)
T cd00757          99 RLDAENAEEL----IAGYDLVLDCTDNFATRYLINDACVKLG  136 (228)
T ss_pred             eeCHHHHHHH----HhCCCEEEEcCCCHHHHHHHHHHHHHcC
Confidence            11 1222222    2469999999998765444444444444

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=95.22  E-value=0.5  Score=42.78  Aligned_cols=30  Identities=23%  Similarity=0.309  Sum_probs=26.1

Q ss_pred             CCCEEEEEcC---ChhHHHHHHHHHHcCCCeEEE
Q 020768          181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIVI  211 (321)
Q Consensus       181 ~g~~vlI~Ga---g~vG~~a~qla~~~g~~~vv~  211 (321)
                      .|+++||+|+   .++|..+++.+...|++ |+.
T Consensus         8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~-Vv~   40 (303)
T PLN02730          8 RGKRAFIAGVADDNGYGWAIAKALAAAGAE-ILV   40 (303)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCE-EEE
Confidence            4889999988   89999999999999994 555

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=95.22  E-value=0.46  Score=37.15  Aligned_cols=94  Identities=20%  Similarity=0.280  Sum_probs=54.2

Q ss_pred             EEEEcC-ChhHHHHHHHHHHcC--CCeEEEEeCCh--hH-HHHHHHcCCCeEEecCCCcccHHHHHHHHHH---------
Q 020768          185 VLIMGA-GPIGLVTMLGARAFG--APRIVIVDVDD--YR-LSVAKELGADNIVKVSTNLQDIAEEVEKIQK---------  249 (321)
Q Consensus       185 vlI~Ga-g~vG~~a~qla~~~g--~~~vv~v~~~~--~~-~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~---------  249 (321)
                      |.|+|+ |.+|..++++.+...  + .|++.....  ++ .+.+++|.+..+...++   +..+.+++...         
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~---~~~~~l~~~~~~~~~~~~v~   76 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADE---EAYEELKKALPSKGPGIEVL   76 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSH---HHHHHHHHHHHHTTSSSEEE
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH---HHHHHHHHHhhhcCCCCEEE
Confidence            578899 999999999999987  5 455544332  33 34567899888776442   22222222210         


Q ss_pred             --------H-hCCCccEEEEcCCCHHHHHHHHHHcccCCEEE
Q 020768          250 --------A-MGTGIDVSFDCAGFNKTMSTALSATRAGGKVC  282 (321)
Q Consensus       250 --------~-~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v  282 (321)
                              . ....+|+|+.+..+-..+...+..++.+=++.
T Consensus        77 ~G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~ia  118 (129)
T PF02670_consen   77 SGPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIA  118 (129)
T ss_dssp             ESHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEE
T ss_pred             eChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEE
Confidence                    0 12456777776666666666666666554443

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed

Probab=95.22  E-value=0.29  Score=41.49  Aligned_cols=99  Identities=15%  Similarity=0.127  Sum_probs=63.9

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      ++.+||-+|+|. |..+..+++......+++++.+++..+.+++    .+...+-...   .+..+.+...  .....+|
T Consensus        40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~~~~---~d~~~~l~~~--~~~~~~D  113 (202)
T PRK00121         40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLRLLC---GDAVEVLLDM--FPDGSLD  113 (202)
T ss_pred             CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEEEEe---cCHHHHHHHH--cCccccc
Confidence            677888888865 6677777777644479999999988887754    2333222111   1221222211  1135689


Q ss_pred             EEEEcCC--------------CHHHHHHHHHHcccCCEEEEEc
Q 020768          257 VSFDCAG--------------FNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       257 ~vid~~g--------------~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      .|+-...              ....++.+.+.|+++|.+++..
T Consensus       114 ~V~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~LkpgG~l~i~~  156 (202)
T PRK00121        114 RIYLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPGGEIHFAT  156 (202)
T ss_pred             eEEEECCCCCCCccccccccCCHHHHHHHHHHcCCCCEEEEEc
Confidence            8886432              2357889999999999998875

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=95.22  E-value=0.11  Score=48.80  Aligned_cols=95  Identities=19%  Similarity=0.277  Sum_probs=65.0

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHH-HHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      .+.++||+|+|-+|.+++..+...|...+.++.++.+|.+ +++++|+..+ .++    +    +...    -..+|+||
T Consensus       177 ~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-~l~----e----l~~~----l~~~DvVi  243 (414)
T COG0373         177 KDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV-ALE----E----LLEA----LAEADVVI  243 (414)
T ss_pred             ccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-cHH----H----HHHh----hhhCCEEE
Confidence            5788999999999999999999999888888888877755 6788995432 221    1    1111    13589999


Q ss_pred             EcCCCHHH---HHHHHHHcccCCE--EEEEcCCC
Q 020768          260 DCAGFNKT---MSTALSATRAGGK--VCLVGMGH  288 (321)
Q Consensus       260 d~~g~~~~---~~~~~~~l~~~G~--~v~~g~~~  288 (321)
                      .+++.+..   -....+.++..-+  ++.++.+.
T Consensus       244 ssTsa~~~ii~~~~ve~a~~~r~~~livDiavPR  277 (414)
T COG0373         244 SSTSAPHPIITREMVERALKIRKRLLIVDIAVPR  277 (414)
T ss_pred             EecCCCccccCHHHHHHHHhcccCeEEEEecCCC
Confidence            99998642   2234444444333  45556553

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=95.20  E-value=0.27  Score=42.52  Aligned_cols=82  Identities=20%  Similarity=0.222  Sum_probs=49.0

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH----HHHcCCCe-EEecCCC-cccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~----~~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~  253 (321)
                      .+.++||+|+ |.+|...+..+...|. .|++++++.++...    ++..+... ++..+-. ..+..+.+.++... ..
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~   82 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVED-FG   82 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-hC
Confidence            4678999998 9999999988888898 68888777554332    22233221 2221111 12222233333221 24


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      .+|++|.+.|.
T Consensus        83 ~~d~vi~~ag~   93 (251)
T PRK12826         83 RLDILVANAGI   93 (251)
T ss_pred             CCCEEEECCCC
Confidence            68999998865

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=95.18  E-value=0.29  Score=42.75  Aligned_cols=82  Identities=18%  Similarity=0.242  Sum_probs=50.1

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCe-EEecCCC-cccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~  253 (321)
                      .+.++||+|+ +++|...+..+...|+ .++.++++.++.+.+    ++.+.+. .+..+-. ..+..+.+..+.+. .+
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~~   87 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSK-LG   87 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence            3789999998 9999999998888999 566677666554432    2223221 2222211 12223333333322 35


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|+++.+.|.
T Consensus        88 ~~d~li~~ag~   98 (255)
T PRK06113         88 KVDILVNNAGG   98 (255)
T ss_pred             CCCEEEECCCC
Confidence            68999999873

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=95.18  E-value=0.74  Score=33.53  Aligned_cols=85  Identities=22%  Similarity=0.272  Sum_probs=53.1

Q ss_pred             EEEEEcCChhHHHHHHHHHHcC---CCeEE-EEeCChhHHHHH-HHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768          184 NVLIMGAGPIGLVTMLGARAFG---APRIV-IVDVDDYRLSVA-KELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g---~~~vv-~v~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      +|.|+|+|.+|.+.+.-....|   . .+. +.++++++.+.+ +++++....      .+..+.++        ..|+|
T Consensus         1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~~------~~~~~~~~--------~advv   65 (96)
T PF03807_consen    1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQATA------DDNEEAAQ--------EADVV   65 (96)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEES------EEHHHHHH--------HTSEE
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhcccccc------CChHHhhc--------cCCEE
Confidence            5778899999999999888888   6 455 558888887765 566643321      12222222        36999


Q ss_pred             EEcCCCHHHHHHHHHH---cccCCEEEEE
Q 020768          259 FDCAGFNKTMSTALSA---TRAGGKVCLV  284 (321)
Q Consensus       259 id~~g~~~~~~~~~~~---l~~~G~~v~~  284 (321)
                      |-|+..+ .+...++.   +.++..++.+
T Consensus        66 ilav~p~-~~~~v~~~i~~~~~~~~vis~   93 (96)
T PF03807_consen   66 ILAVKPQ-QLPEVLSEIPHLLKGKLVISI   93 (96)
T ss_dssp             EE-S-GG-GHHHHHHHHHHHHTTSEEEEE
T ss_pred             EEEECHH-HHHHHHHHHhhccCCCEEEEe
Confidence            9999964 44444433   4455555544

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=95.17  E-value=0.48  Score=42.39  Aligned_cols=114  Identities=13%  Similarity=0.163  Sum_probs=71.0

Q ss_pred             CCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-----HHcCCC---eEEecCCCcccHHHHHHHHHHH
Q 020768          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-----KELGAD---NIVKVSTNLQDIAEEVEKIQKA  250 (321)
Q Consensus       180 ~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-----~~~g~~---~vi~~~~~~~~~~~~~~~~~~~  250 (321)
                      +-|++.+|+|+ .++|...+.-+-..|+ +|+.+.++.+|++..     ++.++.   .++|+...+.++.+ +++.  .
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~-i~~~--l  122 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAKRGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEK-LLEK--L  122 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHH-HHHH--h
Confidence            45789999999 8999766655555999 589999999987654     344432   23455444433333 3332  2


Q ss_pred             hCCCccEEEEcCCCHH---------------------------HHHHHH-HHc-ccCCEEEEEcCCCCCccccchh
Q 020768          251 MGTGIDVSFDCAGFNK---------------------------TMSTAL-SAT-RAGGKVCLVGMGHLEMTVPLTP  297 (321)
Q Consensus       251 ~~~~~d~vid~~g~~~---------------------------~~~~~~-~~l-~~~G~~v~~g~~~~~~~~~~~~  297 (321)
                      .+..+-+.++++|-..                           ..+..+ .++ +..|.++.+|...+..+.+...
T Consensus       123 ~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s  198 (312)
T KOG1014|consen  123 AGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLS  198 (312)
T ss_pred             cCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHH
Confidence            3556778889888532                           011111 223 3568999999877766666543

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=95.17  E-value=0.3  Score=42.33  Aligned_cols=85  Identities=20%  Similarity=0.321  Sum_probs=52.9

Q ss_pred             CCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH----HHHcCCCe--EE--ecCC-CcccHHHHHHHH
Q 020768          178 NIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGADN--IV--KVST-NLQDIAEEVEKI  247 (321)
Q Consensus       178 ~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~----~~~~g~~~--vi--~~~~-~~~~~~~~~~~~  247 (321)
                      +..++.+++|+|+ |++|...++.+...|+ .|++++++.++.+.    +++.+...  ++  +.+. ...+..+....+
T Consensus         8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~   86 (247)
T PRK08945          8 DLLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI   86 (247)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence            3457889999998 9999999988888898 67788887655432    22333221  22  2221 123333334444


Q ss_pred             HHHhCCCccEEEEcCCC
Q 020768          248 QKAMGTGIDVSFDCAGF  264 (321)
Q Consensus       248 ~~~~~~~~d~vid~~g~  264 (321)
                      .+. .+.+|.+|.+.|.
T Consensus        87 ~~~-~~~id~vi~~Ag~  102 (247)
T PRK08945         87 EEQ-FGRLDGVLHNAGL  102 (247)
T ss_pred             HHH-hCCCCEEEECCcc
Confidence            332 3579999998764

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=95.16  E-value=0.18  Score=47.60  Aligned_cols=76  Identities=13%  Similarity=0.237  Sum_probs=47.0

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCC-eEEecCCCcccHHHHHHHHHHHhCCCccE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~-~vi~~~~~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      .+++++|+|+ |++|...+..+...|. +|+++++++++.+.. ...+.. ..+..+-  .+. +.+.+.    -+++|+
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dv--sd~-~~v~~~----l~~IDi  248 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQV--GQE-AALAEL----LEKVDI  248 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeC--CCH-HHHHHH----hCCCCE
Confidence            4789999998 9999999998888898 677777776654322 111111 1222111  121 222222    246999


Q ss_pred             EEEcCCC
Q 020768          258 SFDCAGF  264 (321)
Q Consensus       258 vid~~g~  264 (321)
                      +|.+.|.
T Consensus       249 LInnAGi  255 (406)
T PRK07424        249 LIINHGI  255 (406)
T ss_pred             EEECCCc
Confidence            9998774

>PRK12367 short chain dehydrogenase; Provisional

Probab=95.16  E-value=0.21  Score=43.64  Aligned_cols=74  Identities=20%  Similarity=0.245  Sum_probs=45.3

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCCh-hHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD-YRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      +.+++|+|+ |++|...++.+...|+ .|++++++. ++.+.... +....+..+-.  +.. .+.+.    -+++|++|
T Consensus        14 ~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~--~~~-~~~~~----~~~iDilV   84 (245)
T PRK12367         14 GKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESNDE-SPNEWIKWECG--KEE-SLDKQ----LASLDVLI   84 (245)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhcc-CCCeEEEeeCC--CHH-HHHHh----cCCCCEEE
Confidence            679999998 9999999998888999 577776665 22222111 11222222211  211 22221    24699999


Q ss_pred             EcCCC
Q 020768          260 DCAGF  264 (321)
Q Consensus       260 d~~g~  264 (321)
                      ++.|.
T Consensus        85 nnAG~   89 (245)
T PRK12367         85 LNHGI   89 (245)
T ss_pred             ECCcc
Confidence            99975

>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]

Probab=95.15  E-value=0.74  Score=41.32  Aligned_cols=60  Identities=23%  Similarity=0.384  Sum_probs=46.8

Q ss_pred             HHHHHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEe--CChhHHHHHHHcCCCeEEe
Q 020768          172 HACRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVD--VDDYRLSVAKELGADNIVK  232 (321)
Q Consensus       172 ~~l~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~--~~~~~~~~~~~~g~~~vi~  232 (321)
                      ++.+...++||++| |=+. |..|...+.+|+++|++.++++.  -+.+|+++++.+|+..+..
T Consensus        52 ~Ae~~G~l~pG~tI-VE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t  114 (300)
T COG0031          52 DAEKRGLLKPGGTI-VEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILT  114 (300)
T ss_pred             HHHHcCCCCCCCEE-EEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEc
Confidence            34456779999944 4454 99999999999999997677664  4578999999999976654

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=95.12  E-value=0.31  Score=42.83  Aligned_cols=82  Identities=26%  Similarity=0.290  Sum_probs=50.1

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCe-EEecCCC-cccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~  253 (321)
                      .+.+++|+|+ +++|...+..+...|+ .++.+++++++.+.+    ++.+... .+..+-. ..+..+.+.++.+. .+
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~   86 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKE-VG   86 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh-CC
Confidence            5678999998 9999988888888899 477777776654432    2334322 2222221 12223333333222 35


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|.+.|.
T Consensus        87 ~id~li~~ag~   97 (265)
T PRK07097         87 VIDILVNNAGI   97 (265)
T ss_pred             CCCEEEECCCC
Confidence            69999999885

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=95.10  E-value=0.16  Score=45.18  Aligned_cols=85  Identities=24%  Similarity=0.216  Sum_probs=53.3

Q ss_pred             CCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCC----eEEecCCC-cccHHHHHHHHHH
Q 020768          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGAD----NIVKVSTN-LQDIAEEVEKIQK  249 (321)
Q Consensus       180 ~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~----~vi~~~~~-~~~~~~~~~~~~~  249 (321)
                      -.|..+||+|+ .++|...+..+...|+ +|+.+.+++++.+...    ..+..    ..+..+-. .++..+.+....+
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~   84 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE   84 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence            35788999988 9999999999999999 6777878877654332    22222    11221111 2233333333322


Q ss_pred             HhCCCccEEEEcCCCH
Q 020768          250 AMGTGIDVSFDCAGFN  265 (321)
Q Consensus       250 ~~~~~~d~vid~~g~~  265 (321)
                      ...+++|+.+++.|..
T Consensus        85 ~~~GkidiLvnnag~~  100 (270)
T KOG0725|consen   85 KFFGKIDILVNNAGAL  100 (270)
T ss_pred             HhCCCCCEEEEcCCcC
Confidence            2257799999988864

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=95.10  E-value=0.29  Score=42.49  Aligned_cols=81  Identities=25%  Similarity=0.368  Sum_probs=50.0

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCe-EEecCC-CcccHHHHHHHHHHHhCCC
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADN-IVKVST-NLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~  254 (321)
                      +.++||+|+ |.+|...+..+...|. .|++++++.++.+.+.+    .+... .+..+- +..++.+.+.++.+. ..+
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   78 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAE-FGG   78 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh-cCC
Confidence            357999998 9999999988888999 68888887766554432    22221 121111 122333333343332 356


Q ss_pred             ccEEEEcCCC
Q 020768          255 IDVSFDCAGF  264 (321)
Q Consensus       255 ~d~vid~~g~  264 (321)
                      +|++|-+.+.
T Consensus        79 ~d~vi~~a~~   88 (255)
T TIGR01963        79 LDILVNNAGI   88 (255)
T ss_pred             CCEEEECCCC
Confidence            8999988864

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=95.08  E-value=0.24  Score=50.08  Aligned_cols=82  Identities=24%  Similarity=0.357  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-H----cCCCeE--EecCC-CcccHHHHHHHHHHHh
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-E----LGADNI--VKVST-NLQDIAEEVEKIQKAM  251 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~----~g~~~v--i~~~~-~~~~~~~~~~~~~~~~  251 (321)
                      .++++||+|+ |++|...++.+...|+ .|++++++.++.+.+. +    .+...+  +..+- +..+..+.+.++... 
T Consensus       413 ~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~-  490 (676)
T TIGR02632       413 ARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALA-  490 (676)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHh-
Confidence            3678999998 9999999998888999 6888888776654332 2    232221  22211 122333333333222 


Q ss_pred             CCCccEEEEcCCC
Q 020768          252 GTGIDVSFDCAGF  264 (321)
Q Consensus       252 ~~~~d~vid~~g~  264 (321)
                      .+++|++|.+.|.
T Consensus       491 ~g~iDilV~nAG~  503 (676)
T TIGR02632       491 YGGVDIVVNNAGI  503 (676)
T ss_pred             cCCCcEEEECCCC
Confidence            3579999999984

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.05  E-value=0.33  Score=41.83  Aligned_cols=81  Identities=20%  Similarity=0.343  Sum_probs=49.7

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCe-EEecCCC-cccHHHHHHHHHHHhCCC
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVSTN-LQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~~  254 (321)
                      +.+++|+|+ |++|...+..+...|+ .|+.+++++++.+..    +..+... .+..+-. ..+..+.++++.+ ..++
T Consensus         7 ~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~   84 (239)
T PRK07666          7 GKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKN-ELGS   84 (239)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHH-HcCC
Confidence            578999998 9999999988888999 688888876654432    2223221 1222221 2223333333322 2357


Q ss_pred             ccEEEEcCCC
Q 020768          255 IDVSFDCAGF  264 (321)
Q Consensus       255 ~d~vid~~g~  264 (321)
                      +|++|.+.|.
T Consensus        85 id~vi~~ag~   94 (239)
T PRK07666         85 IDILINNAGI   94 (239)
T ss_pred             ccEEEEcCcc
Confidence            9999998874

>PLN02244 tocopherol O-methyltransferase

Probab=95.04  E-value=0.45  Score=43.82  Aligned_cols=98  Identities=16%  Similarity=0.219  Sum_probs=62.5

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHhCCCc
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~  255 (321)
                      +++++||=+|+|. |..+..+++..|. .|++++.+++..+.+++    .+...-+.+...  |..    ++. ...+.|
T Consensus       117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~--D~~----~~~-~~~~~F  187 (340)
T PLN02244        117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVA--DAL----NQP-FEDGQF  187 (340)
T ss_pred             CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEc--Ccc----cCC-CCCCCc
Confidence            7889998888854 5667788887787 79999999887766554    243211111100  110    010 113568


Q ss_pred             cEEEEcCC-----C-HHHHHHHHHHcccCCEEEEEcC
Q 020768          256 DVSFDCAG-----F-NKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       256 d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      |+|+-.-.     + ...++.+.+.|++||++++...
T Consensus       188 D~V~s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~~  224 (340)
T PLN02244        188 DLVWSMESGEHMPDKRKFVQELARVAAPGGRIIIVTW  224 (340)
T ss_pred             cEEEECCchhccCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence            99986332     1 2467889999999999998753

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=95.02  E-value=0.28  Score=43.60  Aligned_cols=98  Identities=14%  Similarity=0.175  Sum_probs=61.3

Q ss_pred             CCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHH-HHHHcCCCe-EEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADN-IVKVSTNLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       179 ~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~-~~~~~g~~~-vi~~~~~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      ...+.+++|+|+|++|.+++..+...|. .+.+++++.++.+ +++++.... +...     ...    +.   ....+|
T Consensus       114 ~~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~-----~~~----~~---~~~~~D  180 (270)
T TIGR00507       114 LRPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAF-----SMD----EL---PLHRVD  180 (270)
T ss_pred             CccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEe-----chh----hh---cccCcc
Confidence            3457899999999999999988888898 6888888876654 344443211 1111     001    11   123589


Q ss_pred             EEEEcCCCHH--HH---HHHHHHcccCCEEEEEcCCCC
Q 020768          257 VSFDCAGFNK--TM---STALSATRAGGKVCLVGMGHL  289 (321)
Q Consensus       257 ~vid~~g~~~--~~---~~~~~~l~~~G~~v~~g~~~~  289 (321)
                      +||+|++...  ..   ......++++..++.+.+...
T Consensus       181 ivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p~  218 (270)
T TIGR00507       181 LIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNPG  218 (270)
T ss_pred             EEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCCC
Confidence            9999998631  01   112456778878887865543

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>TIGR00477 tehB tellurite resistance protein TehB

Probab=95.02  E-value=0.14  Score=43.22  Aligned_cols=96  Identities=16%  Similarity=0.166  Sum_probs=58.4

Q ss_pred             cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHhC
Q 020768          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~~~~  252 (321)
                      ....++.+||-+|+|. |..+..+++ .|. .|+++|.+++-.+.+++    .+......    ..+..    ...  ..
T Consensus        26 ~~~~~~~~vLDiGcG~-G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~v~~~----~~d~~----~~~--~~   92 (195)
T TIGR00477        26 VKTVAPCKTLDLGCGQ-GRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLPLRTD----AYDIN----AAA--LN   92 (195)
T ss_pred             hccCCCCcEEEeCCCC-CHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCCceeE----eccch----hcc--cc
Confidence            3445567888888844 666667776 476 79999999877766543    23321110    01111    110  12


Q ss_pred             CCccEEEEcC-----CC---HHHHHHHHHHcccCCEEEEEc
Q 020768          253 TGIDVSFDCA-----GF---NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       253 ~~~d~vid~~-----g~---~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      ..+|+|+...     ..   ...++.+.+.|++||.++.+.
T Consensus        93 ~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~~  133 (195)
T TIGR00477        93 EDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPGGYNLIVA  133 (195)
T ss_pred             CCCCEEEEecccccCCHHHHHHHHHHHHHHhCCCcEEEEEE
Confidence            4699998642     11   246778889999999966553

Part of a tellurite-reducing operon tehA and tehB

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=95.00  E-value=0.41  Score=42.05  Aligned_cols=95  Identities=23%  Similarity=0.317  Sum_probs=60.3

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHc----CCC-eEEecCCCcccHHHHHHHHHHHhCCC
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL----GAD-NIVKVSTNLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~----g~~-~vi~~~~~~~~~~~~~~~~~~~~~~~  254 (321)
                      .++.+||=+|+|. |..+..+++. |. .|++++.+++..+.+++.    |.. .+....   .+..    ++.......
T Consensus        43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~---~d~~----~l~~~~~~~  112 (255)
T PRK11036         43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIH---CAAQ----DIAQHLETP  112 (255)
T ss_pred             CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEE---cCHH----HHhhhcCCC
Confidence            4567888888754 6777777775 66 799999999888877653    322 111111   1111    111112457


Q ss_pred             ccEEEEcC-----CC-HHHHHHHHHHcccCCEEEEE
Q 020768          255 IDVSFDCA-----GF-NKTMSTALSATRAGGKVCLV  284 (321)
Q Consensus       255 ~d~vid~~-----g~-~~~~~~~~~~l~~~G~~v~~  284 (321)
                      +|+|+...     .. ...+..+.+.|+++|.++.+
T Consensus       113 fD~V~~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~  148 (255)
T PRK11036        113 VDLILFHAVLEWVADPKSVLQTLWSVLRPGGALSLM  148 (255)
T ss_pred             CCEEEehhHHHhhCCHHHHHHHHHHHcCCCeEEEEE
Confidence            99998542     22 24578899999999999765

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.99  E-value=0.3  Score=42.97  Aligned_cols=106  Identities=18%  Similarity=0.232  Sum_probs=62.2

Q ss_pred             CCCEEEEEcC---ChhHHHHHHHHHHcCCCeEEEEeCC---hhHHH-HHHHcCCCeEEecCC-CcccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVD---DYRLS-VAKELGADNIVKVST-NLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga---g~vG~~a~qla~~~g~~~vv~v~~~---~~~~~-~~~~~g~~~vi~~~~-~~~~~~~~~~~~~~~~~  252 (321)
                      .++++||+|+   +++|...++.+...|++ |+.+.+.   .++.+ +.++++....+..+- +.++..+.+..+.+. .
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~   82 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGAE-LAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQH-W   82 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCCe-EEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHH-h
Confidence            4789999984   58999998888889994 6555332   33333 234445322222221 223334444444332 3


Q ss_pred             CCccEEEEcCCCH---------------H---------------HHHHHHHHcccCCEEEEEcCCC
Q 020768          253 TGIDVSFDCAGFN---------------K---------------TMSTALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       253 ~~~d~vid~~g~~---------------~---------------~~~~~~~~l~~~G~~v~~g~~~  288 (321)
                      +.+|+++++.|..               +               ..+.++..++.+|+++.++...
T Consensus        83 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~  148 (260)
T PRK06997         83 DGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLG  148 (260)
T ss_pred             CCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccc
Confidence            5799999988641               0               1234455666679998887543

>PRK09134 short chain dehydrogenase; Provisional

Probab=94.97  E-value=0.35  Score=42.28  Aligned_cols=83  Identities=20%  Similarity=0.202  Sum_probs=46.9

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHH-HHHH---cCCCe-EEecCCC-cccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKE---LGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~-~~~~---~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~  253 (321)
                      .+.++||+|+ |++|...+..+...|++.++...++.++.+ ..++   .+... .+..+-. ..+..+.+.+..+. .+
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~-~~   86 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAA-LG   86 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence            4678999999 999999988888899853343433443332 2222   23321 1222211 22233333333222 35


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|.+.|.
T Consensus        87 ~iD~vi~~ag~   97 (258)
T PRK09134         87 PITLLVNNASL   97 (258)
T ss_pred             CCCEEEECCcC
Confidence            79999999874

>PRK07577 short chain dehydrogenase; Provisional

Probab=94.97  E-value=0.18  Score=43.18  Aligned_cols=75  Identities=17%  Similarity=0.329  Sum_probs=47.3

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCC-CcccHHHHHHHHHHHhCCCccEE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~-~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      .+.++||+|+ |++|...++.+...|. .|+++.++.++     .+.. .++..+- +.....+.+.++.+  ..++|++
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~-~~~~~D~~~~~~~~~~~~~~~~--~~~~d~v   72 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPG-ELFACDLADIEQTAATLAQINE--IHPVDAI   72 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCc-eEEEeeCCCHHHHHHHHHHHHH--hCCCcEE
Confidence            3578999998 9999999999888998 67777776544     1111 2222211 12233333444433  2368999


Q ss_pred             EEcCCC
Q 020768          259 FDCAGF  264 (321)
Q Consensus       259 id~~g~  264 (321)
                      |.+.|.
T Consensus        73 i~~ag~   78 (234)
T PRK07577         73 VNNVGI   78 (234)
T ss_pred             EECCCC
Confidence            998874

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=94.97  E-value=0.62  Score=39.51  Aligned_cols=91  Identities=13%  Similarity=0.168  Sum_probs=53.6

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh-hH-HHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-YR-LSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~-~~-~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      .|.+|||+|+|.+|...+..+...|+ .|.+++... +. .+++.. +.  + .+...  .+.+       ..-.++|+|
T Consensus         9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~-~~--i-~~~~~--~~~~-------~~l~~adlV   74 (202)
T PRK06718          9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEE-GK--I-RWKQK--EFEP-------SDIVDAFLV   74 (202)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhC-CC--E-EEEec--CCCh-------hhcCCceEE
Confidence            46899999999999999988888998 566665432 12 222222 21  1 11111  1110       112468999


Q ss_pred             EEcCCCHHHHHHHHHHcccCCEEEEEcC
Q 020768          259 FDCAGFNKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       259 id~~g~~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      |-++++++.=..+.... ..+.++.+..
T Consensus        75 iaaT~d~elN~~i~~~a-~~~~lvn~~d  101 (202)
T PRK06718         75 IAATNDPRVNEQVKEDL-PENALFNVIT  101 (202)
T ss_pred             EEcCCCHHHHHHHHHHH-HhCCcEEECC
Confidence            99999865444444444 4455666653

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=94.96  E-value=0.46  Score=42.09  Aligned_cols=106  Identities=18%  Similarity=0.229  Sum_probs=68.3

Q ss_pred             HHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCC-eEEecCCCcccHHHHHHHHHHH
Q 020768          172 HACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD-NIVKVSTNLQDIAEEVEKIQKA  250 (321)
Q Consensus       172 ~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~~~~~~~~~  250 (321)
                      ..+...+++++.+||=+|+|. |..+..+++..+. .+++++.+++..+.+++.... ..+....  .+..    +. ..
T Consensus        43 ~~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~--~D~~----~~-~~  113 (263)
T PTZ00098         43 KILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEA--NDIL----KK-DF  113 (263)
T ss_pred             HHHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEE--CCcc----cC-CC
Confidence            345667889999999998853 5556677777777 799999999888887764221 1111111  1111    00 00


Q ss_pred             hCCCccEEEEcC-----C---CHHHHHHHHHHcccCCEEEEEcC
Q 020768          251 MGTGIDVSFDCA-----G---FNKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       251 ~~~~~d~vid~~-----g---~~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      ....||+|+..-     +   ....++.+.+.|+|+|++++...
T Consensus       114 ~~~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~  157 (263)
T PTZ00098        114 PENTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY  157 (263)
T ss_pred             CCCCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            134689998621     1   13467788899999999998764

>PRK07775 short chain dehydrogenase; Provisional

Probab=94.95  E-value=0.35  Score=42.82  Aligned_cols=81  Identities=19%  Similarity=0.181  Sum_probs=48.1

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCe-EEecCCC-cccHHHHHHHHHHHhCCC
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVSTN-LQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~~  254 (321)
                      ..+++|+|+ |++|...++.+...|+ +|+++.++.++.+.+    +..+... .+..+-. ..+..+.+.++... .++
T Consensus        10 ~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~   87 (274)
T PRK07775         10 RRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEA-LGE   87 (274)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHh-cCC
Confidence            458999998 9999999998888998 577776666554322    2233322 1122211 12222233332221 346


Q ss_pred             ccEEEEcCCC
Q 020768          255 IDVSFDCAGF  264 (321)
Q Consensus       255 ~d~vid~~g~  264 (321)
                      +|++|.+.|.
T Consensus        88 id~vi~~Ag~   97 (274)
T PRK07775         88 IEVLVSGAGD   97 (274)
T ss_pred             CCEEEECCCc
Confidence            8999999875

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=94.94  E-value=0.33  Score=42.08  Aligned_cols=99  Identities=14%  Similarity=0.217  Sum_probs=58.8

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh-------------------hH----HHHHHHcCCCeEEecCCCcc
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-------------------YR----LSVAKELGADNIVKVSTNLQ  238 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~-------------------~~----~~~~~~~g~~~vi~~~~~~~  238 (321)
                      ..+|+|+|+|++|..++..+-..|...+..+|.+.                   .|    .+.++++.++.-+....  .
T Consensus        11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~--~   88 (231)
T cd00755          11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE--E   88 (231)
T ss_pred             CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee--e
Confidence            46899999999999999999999998888887542                   11    12233444332221111  1


Q ss_pred             cHH-HHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCC-EEEEEc
Q 020768          239 DIA-EEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGG-KVCLVG  285 (321)
Q Consensus       239 ~~~-~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G-~~v~~g  285 (321)
                      .+. +...++   ....+|+|+||..+...-..+.+.+...+ .++..+
T Consensus        89 ~i~~~~~~~l---~~~~~D~VvdaiD~~~~k~~L~~~c~~~~ip~I~s~  134 (231)
T cd00755          89 FLTPDNSEDL---LGGDPDFVVDAIDSIRAKVALIAYCRKRKIPVISSM  134 (231)
T ss_pred             ecCHhHHHHH---hcCCCCEEEEcCCCHHHHHHHHHHHHHhCCCEEEEe
Confidence            111 122222   23469999999998665555555555554 344433

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=94.93  E-value=0.31  Score=45.56  Aligned_cols=35  Identities=40%  Similarity=0.494  Sum_probs=31.3

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~  215 (321)
                      .+.+|+|+|+|++|..++..+...|...+..++.+
T Consensus       134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            45689999999999999999999999889988876

>PLN02256 arogenate dehydrogenase

Probab=94.93  E-value=0.63  Score=42.16  Aligned_cols=95  Identities=18%  Similarity=0.195  Sum_probs=57.9

Q ss_pred             HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCC
Q 020768          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~  254 (321)
                      +...-..+.+|.|+|.|.+|...+..++..|. .|++++.++. .+.++++|+..   ..    +..+    +.   ...
T Consensus        29 ~~~~~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~~---~~----~~~e----~~---~~~   92 (304)
T PLN02256         29 EELEKSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVSF---FR----DPDD----FC---EEH   92 (304)
T ss_pred             HhhccCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCee---eC----CHHH----Hh---hCC
Confidence            33444456789999999999998888888887 6778877764 35566677532   11    1111    10   124


Q ss_pred             ccEEEEcCCCHHHHHHHHHH-----cccCCEEEEEcC
Q 020768          255 IDVSFDCAGFNKTMSTALSA-----TRAGGKVCLVGM  286 (321)
Q Consensus       255 ~d~vid~~g~~~~~~~~~~~-----l~~~G~~v~~g~  286 (321)
                      .|+||-|+... .....++-     ++++..++.++.
T Consensus        93 aDvVilavp~~-~~~~vl~~l~~~~l~~~~iviDv~S  128 (304)
T PLN02256         93 PDVVLLCTSIL-STEAVLRSLPLQRLKRSTLFVDVLS  128 (304)
T ss_pred             CCEEEEecCHH-HHHHHHHhhhhhccCCCCEEEecCC
Confidence            67888877753 33333322     345566666665

>PLN03139 formate dehydrogenase; Provisional

Probab=94.92  E-value=0.22  Score=46.60  Aligned_cols=89  Identities=18%  Similarity=0.227  Sum_probs=58.5

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      .|.+|.|+|.|.+|...++.++.+|. .|++.+++..+.+..++.|+...       .++.    ++.    ...|+|+.
T Consensus       198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~~~~-------~~l~----ell----~~sDvV~l  261 (386)
T PLN03139        198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGAKFE-------EDLD----AML----PKCDVVVI  261 (386)
T ss_pred             CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCceec-------CCHH----HHH----hhCCEEEE
Confidence            47799999999999999999999999 67888776544444455554321       1122    221    23677777


Q ss_pred             cCCCHHH----H-HHHHHHcccCCEEEEEc
Q 020768          261 CAGFNKT----M-STALSATRAGGKVCLVG  285 (321)
Q Consensus       261 ~~g~~~~----~-~~~~~~l~~~G~~v~~g  285 (321)
                      +......    + ...+..++++..++.++
T Consensus       262 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~a  291 (386)
T PLN03139        262 NTPLTEKTRGMFNKERIAKMKKGVLIVNNA  291 (386)
T ss_pred             eCCCCHHHHHHhCHHHHhhCCCCeEEEECC
Confidence            7664221    1 24567777777777776

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=94.90  E-value=0.24  Score=44.52  Aligned_cols=36  Identities=17%  Similarity=0.229  Sum_probs=30.4

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~  216 (321)
                      .+.+++|+|+|+.+.+++..+...|++.+.++.++.
T Consensus       123 ~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~  158 (288)
T PRK12749        123 KGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRD  158 (288)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence            567999999999998877777778998898988884

>PRK08303 short chain dehydrogenase; Provisional

Probab=94.90  E-value=0.37  Score=43.58  Aligned_cols=81  Identities=19%  Similarity=0.252  Sum_probs=48.6

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCCh----------hHHH----HHHHcCCCe-EEecCC-CcccHHHH
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD----------YRLS----VAKELGADN-IVKVST-NLQDIAEE  243 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~----------~~~~----~~~~~g~~~-vi~~~~-~~~~~~~~  243 (321)
                      .|.+++|+|+ +++|..+++.+...|+ .|+.++++.          ++.+    .++..|... .+..+- +..+..+.
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   85 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRAL   85 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            4689999998 9999999999999999 566666652          2222    223334321 222221 22233333


Q ss_pred             HHHHHHHhCCCccEEEEcC-C
Q 020768          244 VEKIQKAMGTGIDVSFDCA-G  263 (321)
Q Consensus       244 ~~~~~~~~~~~~d~vid~~-g  263 (321)
                      +.++.+. .+.+|++|++. |
T Consensus        86 ~~~~~~~-~g~iDilVnnA~g  105 (305)
T PRK08303         86 VERIDRE-QGRLDILVNDIWG  105 (305)
T ss_pred             HHHHHHH-cCCccEEEECCcc
Confidence            3443332 35699999988 5

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.89  E-value=0.17  Score=45.12  Aligned_cols=85  Identities=18%  Similarity=0.209  Sum_probs=59.5

Q ss_pred             HHHHHcCC-CCCCEEEEEcCCh-hHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHH
Q 020768          172 HACRRANI-GPETNVLIMGAGP-IGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       172 ~~l~~~~~-~~g~~vlI~Gag~-vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      ..++...+ -.|.+++|+|.|. +|..++.++...|++ |.++.+..                     .++.    +.  
T Consensus       147 ~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gat-Vtv~~s~t---------------------~~l~----~~--  198 (286)
T PRK14175        147 EILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNAS-VTILHSRS---------------------KDMA----SY--  198 (286)
T ss_pred             HHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCe-EEEEeCCc---------------------hhHH----HH--
Confidence            34455443 3689999999955 999999999999994 55554321                     1111    11  


Q ss_pred             HhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCC
Q 020768          250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       250 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  288 (321)
                        -...|+||.++|.+..+..  +.++++..++.+|.+.
T Consensus       199 --~~~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~~  233 (286)
T PRK14175        199 --LKDADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNTP  233 (286)
T ss_pred             --HhhCCEEEECCCCCcccCH--HHcCCCcEEEEcCCCc
Confidence              1357999999998766655  5689999999999754

>TIGR02992 ectoine_eutC ectoine utilization protein EutC

Probab=94.87  E-value=0.53  Score=43.10  Aligned_cols=105  Identities=16%  Similarity=0.161  Sum_probs=67.5

Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHH-HcCCCeEEEEeCChhHHH-HHHHc----CCCeEEecCCCcccHHHHHHHHHHHh
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGAR-AFGAPRIVIVDVDDYRLS-VAKEL----GADNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~-~~g~~~vv~v~~~~~~~~-~~~~~----g~~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      ..+...+++|+|+|..+...+..+. ..+.+.+.+..++.+|.+ +++++    |.. +...    .+..+.+       
T Consensus       125 a~~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~----~~~~~av-------  192 (326)
T TIGR02992       125 AREDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAA----TDPRAAM-------  192 (326)
T ss_pred             CCCCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEe----CCHHHHh-------
Confidence            3345678999999999988877776 578778888888887755 44444    432 2211    1222211       


Q ss_pred             CCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-Cccccch
Q 020768          252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLT  296 (321)
Q Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~  296 (321)
                       ...|+|+.|++....+ -..+.++++-.+..+|...+ ..+++..
T Consensus       193 -~~aDiVvtaT~s~~p~-i~~~~l~~g~~i~~vg~~~p~~rEld~~  236 (326)
T TIGR02992       193 -SGADIIVTTTPSETPI-LHAEWLEPGQHVTAMGSDAEHKNEIDPA  236 (326)
T ss_pred             -ccCCEEEEecCCCCcE-ecHHHcCCCcEEEeeCCCCCCceecCHH
Confidence             3589999999874321 12356889888888885533 3455544

Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).

>PRK13243 glyoxylate reductase; Reviewed

Probab=94.84  E-value=0.28  Score=45.07  Aligned_cols=88  Identities=22%  Similarity=0.251  Sum_probs=59.0

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      .|.+|.|+|.|.+|...++.++.+|. .|++.+++.+.. ...+++...        .++.    ++.    ...|+|+-
T Consensus       149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~-~~~~~~~~~--------~~l~----ell----~~aDiV~l  210 (333)
T PRK13243        149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKPE-AEKELGAEY--------RPLE----ELL----RESDFVSL  210 (333)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCChh-hHHHcCCEe--------cCHH----HHH----hhCCEEEE
Confidence            47799999999999999999999999 688887765432 233444321        1122    221    23688888


Q ss_pred             cCCCHH-H---H-HHHHHHcccCCEEEEEcC
Q 020768          261 CAGFNK-T---M-STALSATRAGGKVCLVGM  286 (321)
Q Consensus       261 ~~g~~~-~---~-~~~~~~l~~~G~~v~~g~  286 (321)
                      +..... +   + ...+..++++..++.++-
T Consensus       211 ~lP~t~~T~~~i~~~~~~~mk~ga~lIN~aR  241 (333)
T PRK13243        211 HVPLTKETYHMINEERLKLMKPTAILVNTAR  241 (333)
T ss_pred             eCCCChHHhhccCHHHHhcCCCCeEEEECcC
Confidence            877532 1   1 356677888888888773

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=94.83  E-value=0.22  Score=40.98  Aligned_cols=78  Identities=14%  Similarity=0.167  Sum_probs=53.9

Q ss_pred             CCCCCEEEEEcCCh-hHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccE
Q 020768          179 IGPETNVLIMGAGP-IGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       179 ~~~g~~vlI~Gag~-vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      --.|.+++|+|+|. +|..++..++..|+ .+.++.++.+                     +..+.+        ..+|+
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~---------------------~l~~~l--------~~aDi   90 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTK---------------------NLKEHT--------KQADI   90 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCch---------------------hHHHHH--------hhCCE
Confidence            35789999999986 59989999999998 5666654421                     111111        34799


Q ss_pred             EEEcCCCHHHHHHHHHHcccCCEEEEEcCCC
Q 020768          258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       258 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  288 (321)
                      ||.+++.+..+..  +.++++-.++.++.+.
T Consensus        91 VIsat~~~~ii~~--~~~~~~~viIDla~pr  119 (168)
T cd01080          91 VIVAVGKPGLVKG--DMVKPGAVVIDVGINR  119 (168)
T ss_pred             EEEcCCCCceecH--HHccCCeEEEEccCCC
Confidence            9999998654333  3567777778888664

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=94.82  E-value=0.37  Score=43.78  Aligned_cols=81  Identities=25%  Similarity=0.362  Sum_probs=49.7

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcC-CCeEEEEeCChhHHHH-HHHcCC--Ce--EEecCCC-cccHHHHHHHHHHHhCC
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFG-APRIVIVDVDDYRLSV-AKELGA--DN--IVKVSTN-LQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~-~~~~g~--~~--vi~~~~~-~~~~~~~~~~~~~~~~~  253 (321)
                      +.+++|+|+ +++|...+..+...| . .|+.+.++.++.+. .++++.  ..  .+..+-. ..+..+.+.++.+ ..+
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~~~   80 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEW-HVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRE-SGR   80 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHH-hCC
Confidence            568999999 999999888888889 7 67777777666543 334431  11  2222211 1233333333322 235


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|.+.|.
T Consensus        81 ~iD~lI~nAG~   91 (314)
T TIGR01289        81 PLDALVCNAAV   91 (314)
T ss_pred             CCCEEEECCCc
Confidence            79999998873

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=94.80  E-value=0.88  Score=41.03  Aligned_cols=43  Identities=21%  Similarity=0.183  Sum_probs=35.5

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCC
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA  227 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~  227 (321)
                      +|.|+|.|.+|...+.-+...|. .|++.++++++.+.+.+.|.
T Consensus         2 ~Ig~IGlG~mG~~la~~L~~~g~-~V~~~dr~~~~~~~l~~~g~   44 (298)
T TIGR00872         2 QLGLIGLGRMGANIVRRLAKRGH-DCVGYDHDQDAVKAMKEDRT   44 (298)
T ss_pred             EEEEEcchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCC
Confidence            58899999999988777777888 67888999998888777664

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=94.79  E-value=0.38  Score=40.64  Aligned_cols=93  Identities=22%  Similarity=0.220  Sum_probs=58.7

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh-------------------hH----HHHHHHcCCCeEEecCCCcc
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-------------------YR----LSVAKELGADNIVKVSTNLQ  238 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~-------------------~~----~~~~~~~g~~~vi~~~~~~~  238 (321)
                      ..+|+|.|+|++|.-.+..+-..|...+..+|.+.                   .|    .+.++++.++..+.....  
T Consensus        21 ~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~~--   98 (197)
T cd01492          21 SARILLIGLKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDTD--   98 (197)
T ss_pred             hCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEec--
Confidence            47899999999999999999999998888887441                   01    223556666544432211  


Q ss_pred             cHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCE
Q 020768          239 DIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGK  280 (321)
Q Consensus       239 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~  280 (321)
                      ...+...++    ..++|+|++|..+......+-+.+...+.
T Consensus        99 ~~~~~~~~~----~~~~dvVi~~~~~~~~~~~ln~~c~~~~i  136 (197)
T cd01492          99 DISEKPEEF----FSQFDVVVATELSRAELVKINELCRKLGV  136 (197)
T ss_pred             CccccHHHH----HhCCCEEEECCCCHHHHHHHHHHHHHcCC
Confidence            111111121    25789999998876554455555555553

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>KOG2017 consensus Molybdopterin synthase sulfurylase [Coenzyme transport and metabolism]

Probab=94.75  E-value=0.11  Score=46.98  Aligned_cols=102  Identities=25%  Similarity=0.283  Sum_probs=60.3

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh-----------------------hHHHHHHHcCCCeEEe-cCCCc
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-----------------------YRLSVAKELGADNIVK-VSTNL  237 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~-----------------------~~~~~~~~~g~~~vi~-~~~~~  237 (321)
                      ...|||+|+|++|--++|++.+.|..++=.+|.+.                       ....++++++.+.-++ |.+ .
T Consensus        66 ~s~VLVVGaGGLGcPa~~YLaaaGvG~lGiVD~DvVe~sNlhRQVlh~ea~vg~~Ka~sA~~~lr~lNs~v~v~~y~~-~  144 (427)
T KOG2017|consen   66 NSSVLVVGAGGLGCPAAQYLAAAGVGRLGIVDYDVVELSNLHRQVLHTEARVGMHKAESAAAFLRRLNSHVEVQTYNE-F  144 (427)
T ss_pred             CccEEEEccCCCCCHHHHHHHHcCCCeecccccceeehhhHHHHHhhhhhhhhhHHHHHHHHHHHhcCCCceeeechh-h
Confidence            35799999999999999999999987655454221                       1122344555433222 211 1


Q ss_pred             ccHHHHHHHHHHHhCCCccEEEEcCCCHHH---HH----------HHHHHcccCCEEEEEcCCCC
Q 020768          238 QDIAEEVEKIQKAMGTGIDVSFDCAGFNKT---MS----------TALSATRAGGKVCLVGMGHL  289 (321)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~---~~----------~~~~~l~~~G~~v~~g~~~~  289 (321)
                      -..+. ..++    -+++|+|+||+-+..+   ++          -.-..|+-.|++..+...++
T Consensus       145 L~~sN-a~~I----i~~YdvVlDCTDN~~TRYLisD~CVlLgkpLVSgSaLr~EGQLtvYny~~G  204 (427)
T KOG2017|consen  145 LSSSN-AFDI----IKQYDVVLDCTDNVPTRYLISDVCVLLGKPLVSGSALRWEGQLTVYNYNNG  204 (427)
T ss_pred             ccchh-HHHH----hhccceEEEcCCCccchhhhhhHHHHcCCcccccccccccceeEEeecCCC
Confidence            11111 1122    2579999999987532   11          11246777888877776554

>PLN02781 Probable caffeoyl-CoA O-methyltransferase

Probab=94.75  E-value=0.42  Score=41.54  Aligned_cols=106  Identities=20%  Similarity=0.249  Sum_probs=67.8

Q ss_pred             cCCCCCCEEEEEcCChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768          177 ANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      .++.++++||=+|. +.|+.++.+++.++ ...+++++.+++..+.++    +.|...-+.+..  .+..+.+.++....
T Consensus        64 ~~~~~~~~vLEiGt-~~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~--gda~~~L~~l~~~~  140 (234)
T PLN02781         64 VKIMNAKNTLEIGV-FTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQ--SDALSALDQLLNND  140 (234)
T ss_pred             HHHhCCCEEEEecC-cccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--ccHHHHHHHHHhCC
Confidence            45567889998886 33666666677653 347999999998877765    356543222221  34444444443211


Q ss_pred             -CCCccEEEEcCCC---HHHHHHHHHHcccCCEEEEEc
Q 020768          252 -GTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       252 -~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  285 (321)
                       ...||+||--...   ...++.+++.|++||.++.-.
T Consensus       141 ~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~dn  178 (234)
T PLN02781        141 PKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAFDN  178 (234)
T ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence             3579999865432   346788899999999988644

>PRK08291 ectoine utilization protein EutC; Validated

Probab=94.73  E-value=0.67  Score=42.49  Aligned_cols=104  Identities=13%  Similarity=0.166  Sum_probs=65.3

Q ss_pred             CCCCCEEEEEcCChhHHHHHHHHHH-cCCCeEEEEeCChhHHHHH-HHc----CCCeEEecCCCcccHHHHHHHHHHHhC
Q 020768          179 IGPETNVLIMGAGPIGLVTMLGARA-FGAPRIVIVDVDDYRLSVA-KEL----GADNIVKVSTNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       179 ~~~g~~vlI~Gag~vG~~a~qla~~-~g~~~vv~v~~~~~~~~~~-~~~----g~~~vi~~~~~~~~~~~~~~~~~~~~~  252 (321)
                      .+...+++|+|+|+.+.+.+..+.. .+.+.+.+.+++.++.+.+ +++    |.. +..+    .++.+.+        
T Consensus       129 ~~~~~~v~IiGaG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~-v~~~----~d~~~al--------  195 (330)
T PRK08291        129 REDASRAAVIGAGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIP-VTVA----RDVHEAV--------  195 (330)
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCce-EEEe----CCHHHHH--------
Confidence            3455789999999999887776664 6777888888988876644 333    332 1111    1222221        


Q ss_pred             CCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-Cccccch
Q 020768          253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLT  296 (321)
Q Consensus       253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~  296 (321)
                      ...|+|+.+++....+-. ...++++-.+..+|...+ ..+++..
T Consensus       196 ~~aDiVi~aT~s~~p~i~-~~~l~~g~~v~~vg~d~~~~rEld~~  239 (330)
T PRK08291        196 AGADIIVTTTPSEEPILK-AEWLHPGLHVTAMGSDAEHKNEIAPA  239 (330)
T ss_pred             ccCCEEEEeeCCCCcEec-HHHcCCCceEEeeCCCCCCcccCCHH
Confidence            347999999887532211 234788888888885433 3455543

>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB

Probab=94.72  E-value=0.63  Score=44.28  Aligned_cols=105  Identities=15%  Similarity=0.154  Sum_probs=63.3

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCCeEE-ecCCCcccHHHHHHHHH
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADNIV-KVSTNLQDIAEEVEKIQ  248 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~~vi-~~~~~~~~~~~~~~~~~  248 (321)
                      ......++|++||=.|+|+ |..++++++.++...+++++.++++.+.++    ++|....+ ....+..+..    .+.
T Consensus       231 ~~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~~~~~----~~~  305 (426)
T TIGR00563       231 ATWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDGRGPS----QWA  305 (426)
T ss_pred             HHHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccccccc----ccc
Confidence            3456778999988887643 334445555554337999999999877654    46665211 1111111110    000


Q ss_pred             HHhCCCccEEEE---cCCC-------------------------HHHHHHHHHHcccCCEEEEEc
Q 020768          249 KAMGTGIDVSFD---CAGF-------------------------NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       249 ~~~~~~~d~vid---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~g  285 (321)
                        ....||.||-   |+|.                         ...+..+++.|++||+++..-
T Consensus       306 --~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~LkpgG~lvyst  368 (426)
T TIGR00563       306 --ENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTGGTLVYAT  368 (426)
T ss_pred             --cccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence              1346999874   4542                         136778899999999998654

The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.

>PRK07791 short chain dehydrogenase; Provisional

Probab=94.72  E-value=0.37  Score=43.09  Aligned_cols=83  Identities=28%  Similarity=0.328  Sum_probs=49.0

Q ss_pred             CCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCCh---------hHH-HHHHH---cCCCe-EEecCC-CcccHHHH
Q 020768          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD---------YRL-SVAKE---LGADN-IVKVST-NLQDIAEE  243 (321)
Q Consensus       180 ~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~---------~~~-~~~~~---~g~~~-vi~~~~-~~~~~~~~  243 (321)
                      -.+.++||+|+ +++|...++.+...|+ .+++++.+.         ++. +.+++   .+... .+..+- +.++..+.
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   82 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL   82 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence            35789999998 9999999998888999 466665443         322 22222   23322 121111 12233333


Q ss_pred             HHHHHHHhCCCccEEEEcCCC
Q 020768          244 VEKIQKAMGTGIDVSFDCAGF  264 (321)
Q Consensus       244 ~~~~~~~~~~~~d~vid~~g~  264 (321)
                      +.++.+. .+.+|++|.+.|.
T Consensus        83 ~~~~~~~-~g~id~lv~nAG~  102 (286)
T PRK07791         83 VDAAVET-FGGLDVLVNNAGI  102 (286)
T ss_pred             HHHHHHh-cCCCCEEEECCCC
Confidence            4443332 3579999999874

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=94.71  E-value=0.38  Score=42.15  Aligned_cols=82  Identities=22%  Similarity=0.206  Sum_probs=47.1

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeC-ChhHHHH----HHHcCCCe-EEecCC-CcccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV-DDYRLSV----AKELGADN-IVKVST-NLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~-~~~~~~~----~~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~  252 (321)
                      .+.++||+|+ |++|...++.+...|++ ++.+.+ +.++.+.    ++..+... .+..+- +..+..+.+..+.+. .
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~-vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~-~   83 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEKAK-VVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKE-F   83 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH-c
Confidence            4789999998 99999999999999984 555444 3333222    22233221 121111 112222223333222 3


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      +++|+++.+.|.
T Consensus        84 g~id~lv~~ag~   95 (261)
T PRK08936         84 GTLDVMINNAGI   95 (261)
T ss_pred             CCCCEEEECCCC
Confidence            579999999884

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=94.71  E-value=0.21  Score=44.89  Aligned_cols=36  Identities=22%  Similarity=0.361  Sum_probs=31.2

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~  216 (321)
                      .+.+++|+|+|++|.+++..+...|++.|.++.++.
T Consensus       125 ~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~  160 (289)
T PRK12548        125 KGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD  160 (289)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence            467899999999999999888889997788888875

>PRK03612 spermidine synthase; Provisional

Probab=94.71  E-value=0.4  Score=46.85  Aligned_cols=99  Identities=18%  Similarity=0.140  Sum_probs=63.8

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcC-C---------CeEEecCCCcccHHHHHHHHHH
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG-A---------DNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g-~---------~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      ++.++||++|+| .|..+..+++.-...++.+++-+++-.+.+++.. .         +.-+...  ..|..+.+++   
T Consensus       296 ~~~~rVL~IG~G-~G~~~~~ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv~vi--~~Da~~~l~~---  369 (521)
T PRK03612        296 ARPRRVLVLGGG-DGLALREVLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRVTVV--NDDAFNWLRK---  369 (521)
T ss_pred             CCCCeEEEEcCC-ccHHHHHHHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCceEEE--EChHHHHHHh---
Confidence            456899999875 3556666776544468999999999999988721 1         0001100  1233333322   


Q ss_pred             HhCCCccEEEEcCCCH-----------HHHHHHHHHcccCCEEEEEc
Q 020768          250 AMGTGIDVSFDCAGFN-----------KTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       250 ~~~~~~d~vid~~g~~-----------~~~~~~~~~l~~~G~~v~~g  285 (321)
                       ....+|+|+-....+           +.++.+.+.|+++|.++.-.
T Consensus       370 -~~~~fDvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pgG~lv~~~  415 (521)
T PRK03612        370 -LAEKFDVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPDGLLVVQS  415 (521)
T ss_pred             -CCCCCCEEEEeCCCCCCcchhccchHHHHHHHHHhcCCCeEEEEec
Confidence             246799998754422           35678899999999988754

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=94.69  E-value=0.021  Score=45.80  Aligned_cols=94  Identities=18%  Similarity=0.168  Sum_probs=56.4

Q ss_pred             EEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCC----CcccHHHHHHHHHHHhCCCccEEEE
Q 020768          185 VLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST----NLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       185 vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~----~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      |+|+|+|++|.+.+..++..|. .|..+.+++ +.+..++.|........+    ........     ......+|++|-
T Consensus         1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~D~viv   73 (151)
T PF02558_consen    1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP-----SADAGPYDLVIV   73 (151)
T ss_dssp             EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH-----GHHHSTESEEEE
T ss_pred             CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc-----hhccCCCcEEEE
Confidence            6899999999988888888888 577777777 777677666432111100    00000000     011367999999


Q ss_pred             cCCCHH---HHHHHHHHcccCCEEEEEc
Q 020768          261 CAGFNK---TMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       261 ~~g~~~---~~~~~~~~l~~~G~~v~~g  285 (321)
                      |+=..+   .++.+...+.++..++++.
T Consensus        74 ~vKa~~~~~~l~~l~~~~~~~t~iv~~q  101 (151)
T PF02558_consen   74 AVKAYQLEQALQSLKPYLDPNTTIVSLQ  101 (151)
T ss_dssp             -SSGGGHHHHHHHHCTGEETTEEEEEES
T ss_pred             EecccchHHHHHHHhhccCCCcEEEEEe
Confidence            987643   3444445566666666654

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>PLN02233 ubiquinone biosynthesis methyltransferase

Probab=94.67  E-value=0.45  Score=42.04  Aligned_cols=105  Identities=17%  Similarity=0.185  Sum_probs=66.5

Q ss_pred             HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHHHcC-------CCeEEecCCCcccHHHHHHH
Q 020768          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKELG-------ADNIVKVSTNLQDIAEEVEK  246 (321)
Q Consensus       175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~~~g-------~~~vi~~~~~~~~~~~~~~~  246 (321)
                      +...++++++||=+|+|. |..+..+++..+. ..|+++|.+++-.+.+++..       .+.+-....+.       .+
T Consensus        67 ~~~~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~-------~~  138 (261)
T PLN02233         67 SWSGAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDA-------TD  138 (261)
T ss_pred             HHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEccc-------cc
Confidence            446778899999998854 4566777777653 37999999999888776421       11111111110       11


Q ss_pred             HHHHhCCCccEEEEcCC-----C-HHHHHHHHHHcccCCEEEEEcCCC
Q 020768          247 IQKAMGTGIDVSFDCAG-----F-NKTMSTALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       247 ~~~~~~~~~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~g~~~  288 (321)
                      +. .....+|.|+-..+     + ...++.+.+.|+|||++++.-...
T Consensus       139 lp-~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~~~  185 (261)
T PLN02233        139 LP-FDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDFNK  185 (261)
T ss_pred             CC-CCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEECCC
Confidence            10 11345899875322     1 246889999999999998886543

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=94.67  E-value=0.37  Score=44.38  Aligned_cols=78  Identities=18%  Similarity=0.121  Sum_probs=46.4

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHH-HHHHcCC--C-eEEecCCCcccHHHHHHHHHHHhCCCc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGA--D-NIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~-~~~~~g~--~-~vi~~~~~~~~~~~~~~~~~~~~~~~~  255 (321)
                      .|.+|||+|+ |.+|..+++.+...|. .|++++++.+... ..+.++.  . ..+..+  -.+. +.+.++.+  ..++
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D--l~~~-~~~~~~~~--~~~~   76 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGD--IRDA-AKLRKAIA--EFKP   76 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEcc--CCCH-HHHHHHHh--hcCC
Confidence            3689999998 9999999999999998 5777766554322 2222221  1 112111  1121 22333322  2368


Q ss_pred             cEEEEcCCC
Q 020768          256 DVSFDCAGF  264 (321)
Q Consensus       256 d~vid~~g~  264 (321)
                      |+||.+.+.
T Consensus        77 d~vih~A~~   85 (349)
T TIGR02622        77 EIVFHLAAQ   85 (349)
T ss_pred             CEEEECCcc
Confidence            999999873

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.65  E-value=0.32  Score=41.84  Aligned_cols=82  Identities=21%  Similarity=0.212  Sum_probs=47.0

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCC-eEEecCC-CcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGAD-NIVKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      +..++||+|+ |.+|...++.+...|.+.++.+.++.+..+.+    ...+.. ..+..+- +..++.+.+.++.+. ..
T Consensus         5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~~   83 (249)
T PRK12825          5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVER-FG   83 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHH-cC
Confidence            3468999999 99999999999999995444444444433322    222322 1222221 122233333333221 35


Q ss_pred             CccEEEEcCC
Q 020768          254 GIDVSFDCAG  263 (321)
Q Consensus       254 ~~d~vid~~g  263 (321)
                      ++|.+|.+.|
T Consensus        84 ~id~vi~~ag   93 (249)
T PRK12825         84 RIDILVNNAG   93 (249)
T ss_pred             CCCEEEECCc
Confidence            7999999887

>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases

Probab=94.65  E-value=0.28  Score=41.73  Aligned_cols=107  Identities=21%  Similarity=0.272  Sum_probs=71.0

Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHHh-
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKAM-  251 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~~~-  251 (321)
                      +.....+||-+|. ..|+.++.+|+.+. -.++++++.++++.+.++    +.|...-+.+..  .+..+.+.++.... 
T Consensus        42 ~~~~~k~vLEIGt-~~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~--gda~~~l~~l~~~~~  118 (205)
T PF01596_consen   42 RLTRPKRVLEIGT-FTGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIE--GDALEVLPELANDGE  118 (205)
T ss_dssp             HHHT-SEEEEEST-TTSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEE--S-HHHHHHHHHHTTT
T ss_pred             HhcCCceEEEecc-ccccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEE--eccHhhHHHHHhccC
Confidence            3455679999985 45888888888763 137999999998887774    456543233222  34555566554322 


Q ss_pred             CCCccEEEEcCCCH---HHHHHHHHHcccCCEEEEEcCC
Q 020768          252 GTGIDVSFDCAGFN---KTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       252 ~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      .+.||+||--..-.   ..+..+++.|++||.++.=...
T Consensus       119 ~~~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~DN~l  157 (205)
T PF01596_consen  119 EGQFDFVFIDADKRNYLEYFEKALPLLRPGGVIIADNVL  157 (205)
T ss_dssp             TTSEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEEETTT
T ss_pred             CCceeEEEEcccccchhhHHHHHhhhccCCeEEEEcccc
Confidence            24799988654433   3577888999999999887744

The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....

>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase

Probab=94.64  E-value=0.4  Score=41.31  Aligned_cols=103  Identities=19%  Similarity=0.224  Sum_probs=64.5

Q ss_pred             HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHH
Q 020768          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      ....++++++||=+|+|. |..+..+++..+. ..+++++.+++..+.+++    .+.+.+.....   +..    ++. 
T Consensus        39 ~~l~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~---d~~----~~~-  109 (231)
T TIGR02752        39 KRMNVQAGTSALDVCCGT-ADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHG---NAM----ELP-  109 (231)
T ss_pred             HhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEe---chh----cCC-
Confidence            456778899999998854 5566677776542 279999999888776653    23332211111   111    110 


Q ss_pred             HhCCCccEEEEcC-----CC-HHHHHHHHHHcccCCEEEEEcC
Q 020768          250 AMGTGIDVSFDCA-----GF-NKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       250 ~~~~~~d~vid~~-----g~-~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      .....+|+|+-+.     .. ...+..+.+.|+++|+++..-.
T Consensus       110 ~~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~  152 (231)
T TIGR02752       110 FDDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPGGKVVCLET  152 (231)
T ss_pred             CCCCCccEEEEecccccCCCHHHHHHHHHHHcCcCeEEEEEEC
Confidence            1135689987532     11 2456788899999999987753

MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=94.62  E-value=0.95  Score=39.35  Aligned_cols=108  Identities=21%  Similarity=0.321  Sum_probs=74.4

Q ss_pred             HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcC----CCeEEecCCCcccHHHHHHHHHHH
Q 020768          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG----ADNIVKVSTNLQDIAEEVEKIQKA  250 (321)
Q Consensus       175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g----~~~vi~~~~~~~~~~~~~~~~~~~  250 (321)
                      ....+++|++||=+++ +.|-.++.+++..|-..|+++|-+++-++.+++--    ... +.+...  |    ..++. .
T Consensus        45 ~~~~~~~g~~vLDva~-GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~--d----Ae~LP-f  115 (238)
T COG2226          45 SLLGIKPGDKVLDVAC-GTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVG--D----AENLP-F  115 (238)
T ss_pred             HhhCCCCCCEEEEecC-CccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEe--c----hhhCC-C
Confidence            3456668999987765 45999999999998668999999999888776532    222 111111  1    11111 1


Q ss_pred             hCCCccEEEEcCCC------HHHHHHHHHHcccCCEEEEEcCCCCCc
Q 020768          251 MGTGIDVSFDCAGF------NKTMSTALSATRAGGKVCLVGMGHLEM  291 (321)
Q Consensus       251 ~~~~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g~~~~~~  291 (321)
                      -+..||+|.-+.|=      +..+.++.+.|+|+|+++++.+..+..
T Consensus       116 ~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~p~~  162 (238)
T COG2226         116 PDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSKPDN  162 (238)
T ss_pred             CCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCCCCc
Confidence            24668888776653      246889999999999999999876643

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=94.59  E-value=0.3  Score=44.41  Aligned_cols=87  Identities=11%  Similarity=0.163  Sum_probs=56.5

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      .|.+|.|+|.|.+|...++.++.+|+ .|.+.+.+.++..     +.+...    ...+    +.++.    ...|+|+.
T Consensus       135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~~~~-----~~~~~~----~~~~----l~e~l----~~aDvvv~  196 (312)
T PRK15469        135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRKSWP-----GVQSFA----GREE----LSAFL----SQTRVLIN  196 (312)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCCCC-----Cceeec----cccc----HHHHH----hcCCEEEE
Confidence            57899999999999999999999999 6778776543321     111111    0111    22221    34688888


Q ss_pred             cCCCHHH----H-HHHHHHcccCCEEEEEc
Q 020768          261 CAGFNKT----M-STALSATRAGGKVCLVG  285 (321)
Q Consensus       261 ~~g~~~~----~-~~~~~~l~~~G~~v~~g  285 (321)
                      +......    + ...++.++++..++.+|
T Consensus       197 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~a  226 (312)
T PRK15469        197 LLPNTPETVGIINQQLLEQLPDGAYLLNLA  226 (312)
T ss_pred             CCCCCHHHHHHhHHHHHhcCCCCcEEEECC
Confidence            7775322    1 24567788888877777

>PRK05855 short chain dehydrogenase; Validated

Probab=94.59  E-value=0.34  Score=47.58  Aligned_cols=82  Identities=23%  Similarity=0.273  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCC-eEEecCC-CcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGAD-NIVKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      .+.++||+|+ |++|...++.+...|. .|+.++++.++.+.+    ++.|.. ..+..+- +.....+.+.++.+ ..+
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~-~~g  391 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRA-EHG  391 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH-hcC
Confidence            4568999998 9999999988888999 588888887665433    223432 1222221 12223333333322 235


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      .+|++|+++|.
T Consensus       392 ~id~lv~~Ag~  402 (582)
T PRK05855        392 VPDIVVNNAGI  402 (582)
T ss_pred             CCcEEEECCcc
Confidence            79999999885

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=94.58  E-value=0.34  Score=43.22  Aligned_cols=88  Identities=20%  Similarity=0.141  Sum_probs=57.0

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCC
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  263 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  263 (321)
                      +|.|+|.|.+|...+..++..|. .|.+.++++++.+.+.+.|.-....     .+. +   .     -...|+||.|+.
T Consensus         2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~~~-----~~~-~---~-----~~~aDlVilavp   66 (279)
T PRK07417          2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDEAS-----TDL-S---L-----LKDCDLVILALP   66 (279)
T ss_pred             eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCccccc-----CCH-h---H-----hcCCCEEEEcCC
Confidence            58899999999888888887887 6899999998888888777421110     011 1   1     135788888888


Q ss_pred             CHHH---HHHHHHHcccCCEEEEEcC
Q 020768          264 FNKT---MSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       264 ~~~~---~~~~~~~l~~~G~~v~~g~  286 (321)
                      .+..   ++.+...++++..+..++.
T Consensus        67 ~~~~~~~~~~l~~~l~~~~ii~d~~S   92 (279)
T PRK07417         67 IGLLLPPSEQLIPALPPEAIVTDVGS   92 (279)
T ss_pred             HHHHHHHHHHHHHhCCCCcEEEeCcc
Confidence            5433   2233344455555555553

>TIGR02415 23BDH acetoin reductases

Probab=94.55  E-value=0.35  Score=41.98  Aligned_cols=80  Identities=19%  Similarity=0.263  Sum_probs=48.3

Q ss_pred             CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH-HH---HcCCCe-EEecCC-CcccHHHHHHHHHHHhCCCc
Q 020768          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AK---ELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI  255 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~-~~---~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~~  255 (321)
                      .+++|+|+ |++|...++.+...|+ .++.+.+++++.+. .+   ..+... .+..+- +.....+.+.++.+. .+.+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~-~~~i   78 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEK-FGGF   78 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cCCC
Confidence            36899998 9999999999989998 57777776654332 22   233221 122111 122233333443332 3468


Q ss_pred             cEEEEcCCC
Q 020768          256 DVSFDCAGF  264 (321)
Q Consensus       256 d~vid~~g~  264 (321)
                      |++|.+.|.
T Consensus        79 d~vi~~ag~   87 (254)
T TIGR02415        79 DVMVNNAGV   87 (254)
T ss_pred             CEEEECCCc
Confidence            999999874

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=94.54  E-value=0.18  Score=50.82  Aligned_cols=78  Identities=23%  Similarity=0.330  Sum_probs=51.3

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChh---------------------HHHHHHHcCCCeEEecCCCcc
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDY---------------------RLSVAKELGADNIVKVSTNLQ  238 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~---------------------~~~~~~~~g~~~vi~~~~~~~  238 (321)
                      ..+++|+|+|+|+.|+.++..+...|++ |++++..++                     ..+.++++|++...+..-. .
T Consensus       325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~~-V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~-~  402 (654)
T PRK12769        325 KSDKRVAIIGAGPAGLACADVLARNGVA-VTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVG-K  402 (654)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCCe-EEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeC-C
Confidence            3578999999999999999999999994 777765432                     3456677786543221100 1


Q ss_pred             cHHHHHHHHHHHhCCCccEEEEcCCCH
Q 020768          239 DIAEEVEKIQKAMGTGIDVSFDCAGFN  265 (321)
Q Consensus       239 ~~~~~~~~~~~~~~~~~d~vid~~g~~  265 (321)
                      +.  .+..+    ...+|.||.++|..
T Consensus       403 ~i--~~~~~----~~~~DavilAtGa~  423 (654)
T PRK12769        403 DI--SLESL----LEDYDAVFVGVGTY  423 (654)
T ss_pred             cC--CHHHH----HhcCCEEEEeCCCC
Confidence            11  11122    13689999998863

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=94.53  E-value=0.37  Score=44.77  Aligned_cols=97  Identities=24%  Similarity=0.267  Sum_probs=64.3

Q ss_pred             CEEEEEcC-ChhHHHHHHHHHHc--CCCeEEEEe--CChhH-HHHHHHcCCCeEEecCCCcccHHHHHHHHH--------
Q 020768          183 TNVLIMGA-GPIGLVTMLGARAF--GAPRIVIVD--VDDYR-LSVAKELGADNIVKVSTNLQDIAEEVEKIQ--------  248 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~~~--g~~~vv~v~--~~~~~-~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~--------  248 (321)
                      ++|.|+|+ |.+|..+++..+..  .+ .++++.  ++.++ .++++++++..+...++.   ..+.+++..        
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~---~~~~l~~~l~~~~~~v~   77 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVADEE---AAKELKEALAAAGIEVL   77 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHH---HHHHHHHhhccCCceEE
Confidence            57899998 99999999998865  55 455543  44444 346678999877654321   111121110        


Q ss_pred             -------H-HhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEE
Q 020768          249 -------K-AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCL  283 (321)
Q Consensus       249 -------~-~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~  283 (321)
                             + .....+|+|+.+.++...+...+.+++.|-++.+
T Consensus        78 ~G~~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaL  120 (385)
T PRK05447         78 AGEEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIAL  120 (385)
T ss_pred             EChhHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEE
Confidence                   0 0124589999999987788888899988777655

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.52  E-value=0.22  Score=44.63  Aligned_cols=84  Identities=12%  Similarity=0.137  Sum_probs=57.7

Q ss_pred             HHHHcC-CCCCCEEEEEcCCh-hHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHH
Q 020768          173 ACRRAN-IGPETNVLIMGAGP-IGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA  250 (321)
Q Consensus       173 ~l~~~~-~~~g~~vlI~Gag~-vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~  250 (321)
                      .++... --.|.+++|+|+|+ +|...+.++...|+ .|.++.+..+                     +    +.+.   
T Consensus       149 ~L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t~---------------------~----L~~~---  199 (283)
T PRK14192        149 LLKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRTQ---------------------N----LPEL---  199 (283)
T ss_pred             HHHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCch---------------------h----HHHH---
Confidence            344433 35788999999976 99999999999998 5666543111                     1    1111   


Q ss_pred             hCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCC
Q 020768          251 MGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       251 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  288 (321)
                       -..+|++|.++|.+..+.  .+.++++..++.+|...
T Consensus       200 -~~~aDIvI~AtG~~~~v~--~~~lk~gavViDvg~n~  234 (283)
T PRK14192        200 -VKQADIIVGAVGKPELIK--KDWIKQGAVVVDAGFHP  234 (283)
T ss_pred             -hccCCEEEEccCCCCcCC--HHHcCCCCEEEEEEEee
Confidence             135899999998766433  36689998998888553

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=94.52  E-value=0.37  Score=41.26  Aligned_cols=116  Identities=22%  Similarity=0.275  Sum_probs=69.0

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcC---C-CeEEecC---CCcccHHHHHHHHHHHhCC
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG---A-DNIVKVS---TNLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g---~-~~vi~~~---~~~~~~~~~~~~~~~~~~~  253 (321)
                      |.+++++|+ |++|+.....+-..|+. +.++..+.|+.+...+|.   . ..++.+.   ....+..+..++...+ -+
T Consensus         5 GKna~vtggagGIGl~~sk~Ll~kgik-~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~-fg   82 (261)
T KOG4169|consen    5 GKNALVTGGAGGIGLATSKALLEKGIK-VLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILAT-FG   82 (261)
T ss_pred             CceEEEecCCchhhHHHHHHHHHcCch-heeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHH-hC
Confidence            889999976 99999988888888995 555555544444333332   2 2232211   1234445555555443 35


Q ss_pred             CccEEEEcCCCHH-----------------HHHHHHHH-----cccCCEEEEEcCCCCCccccchhhh
Q 020768          254 GIDVSFDCAGFNK-----------------TMSTALSA-----TRAGGKVCLVGMGHLEMTVPLTPAA  299 (321)
Q Consensus       254 ~~d~vid~~g~~~-----------------~~~~~~~~-----l~~~G~~v~~g~~~~~~~~~~~~~~  299 (321)
                      .+|+.|+..|-.+                 .-..++..     -.++|.++.+++..+..+.+.-+.+
T Consensus        83 ~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY  150 (261)
T KOG4169|consen   83 TIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVY  150 (261)
T ss_pred             ceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhh
Confidence            6899999877421                 11222222     2477999999987765555555543

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=94.51  E-value=0.41  Score=41.43  Aligned_cols=81  Identities=26%  Similarity=0.220  Sum_probs=46.1

Q ss_pred             CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH----HHHcCCCe-EEecCC-CcccHHHHHHHHHHHhCCCc
Q 020768          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI  255 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~----~~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~~  255 (321)
                      +++||+|+ |++|...++.+...|++.++...++.++.+.    ++..+... .+..+- +..+..+.+.++.+. .+++
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~i   81 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSA-FGRL   81 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHh-cCCC
Confidence            47999998 9999999999888898533334445444332    22233221 222221 122333333333322 3569


Q ss_pred             cEEEEcCCC
Q 020768          256 DVSFDCAGF  264 (321)
Q Consensus       256 d~vid~~g~  264 (321)
                      |++|.++|.
T Consensus        82 d~li~~ag~   90 (248)
T PRK06947         82 DALVNNAGI   90 (248)
T ss_pred             CEEEECCcc
Confidence            999998873

>PF13823 ADH_N_assoc: Alcohol dehydrogenase GroES-associated; PDB: 2DPH_B

Probab=94.50  E-value=0.046  Score=28.84  Aligned_cols=22  Identities=14%  Similarity=0.228  Sum_probs=16.1

Q ss_pred             ceeEEEccCCCeEEEEecCCCC
Q 020768           18 NMAAWLLGVNTLKIQPFELPSL   39 (321)
Q Consensus        18 ~~a~~~~~~~~l~~~e~~~p~~   39 (321)
                      |||+++.+++.++++++|.|.+
T Consensus         1 MkAv~y~G~~~v~ve~VpdP~I   22 (23)
T PF13823_consen    1 MKAVVYHGPKDVRVEEVPDPKI   22 (23)
T ss_dssp             -EEEEEEETTEEEEEEE----S
T ss_pred             CcceEEeCCCceEEEECCCccc
Confidence            8999999999999999999875

>PRK00536 speE spermidine synthase; Provisional

Probab=94.49  E-value=0.23  Score=43.83  Aligned_cols=101  Identities=10%  Similarity=-0.115  Sum_probs=64.3

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      ...++|||+|+|- |-.+-.++|+-.  .|..++-+++-.+.++++-+...-.+++..-+....+.   +.....+|+||
T Consensus        71 ~~pk~VLIiGGGD-Gg~~REvLkh~~--~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~l~~~~~---~~~~~~fDVII  144 (262)
T PRK00536         71 KELKEVLIVDGFD-LELAHQLFKYDT--HVDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLL---DLDIKKYDLII  144 (262)
T ss_pred             CCCCeEEEEcCCc-hHHHHHHHCcCC--eeEEEECCHHHHHHHHHHCHHHHHhhcCCCEEEeehhh---hccCCcCCEEE
Confidence            4458999998643 555667777753  79999999999998888332110011111111111121   11235799876


Q ss_pred             E-cCCCHHHHHHHHHHcccCCEEEEEcC
Q 020768          260 D-CAGFNKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       260 d-~~g~~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      - +.-+++..+.+.++|+++|.++.=+.
T Consensus       145 vDs~~~~~fy~~~~~~L~~~Gi~v~Qs~  172 (262)
T PRK00536        145 CLQEPDIHKIDGLKRMLKEDGVFISVAK  172 (262)
T ss_pred             EcCCCChHHHHHHHHhcCCCcEEEECCC
Confidence            4 46667788899999999999887653

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=94.49  E-value=0.26  Score=43.23  Aligned_cols=78  Identities=22%  Similarity=0.232  Sum_probs=47.9

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeE-EecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI-VKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      .+.++||+|+ |++|...++.+...|+ .|+.++.+.++.+.   .....+ .|.. +..+..+.+..+.+. .+++|++
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~~~~~D~~-~~~~~~~~~~~~~~~-~g~id~l   81 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQFVPTDVS-SAEEVNHTVAEIIEK-FGRIDGL   81 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceEEEEccCC-CHHHHHHHHHHHHHH-cCCCCEE
Confidence            3678999998 9999999999988999 57777766554321   111111 1221 122333333333322 3579999


Q ss_pred             EEcCCC
Q 020768          259 FDCAGF  264 (321)
Q Consensus       259 id~~g~  264 (321)
                      |.+.|.
T Consensus        82 i~~Ag~   87 (266)
T PRK06171         82 VNNAGI   87 (266)
T ss_pred             EECCcc
Confidence            999873

>PRK09135 pteridine reductase; Provisional

Probab=94.45  E-value=0.51  Score=40.71  Aligned_cols=81  Identities=19%  Similarity=0.150  Sum_probs=46.6

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCC-hhHHHHH----HHcCCCe--EEecCC-CcccHHHHHHHHHHHh
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD-DYRLSVA----KELGADN--IVKVST-NLQDIAEEVEKIQKAM  251 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~-~~~~~~~----~~~g~~~--vi~~~~-~~~~~~~~~~~~~~~~  251 (321)
                      .+.++||+|+ |.+|..++..+...|+ .|++++++ .++.+.+    ++.....  .+..+- +.....+.+.++... 
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-   82 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAA-   82 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHH-
Confidence            4578999998 9999999888888899 57776664 3332222    1222111  121111 112222233333222 


Q ss_pred             CCCccEEEEcCC
Q 020768          252 GTGIDVSFDCAG  263 (321)
Q Consensus       252 ~~~~d~vid~~g  263 (321)
                      .+++|++|.+.|
T Consensus        83 ~~~~d~vi~~ag   94 (249)
T PRK09135         83 FGRLDALVNNAS   94 (249)
T ss_pred             cCCCCEEEECCC
Confidence            356899999998

>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed

Probab=94.45  E-value=1  Score=38.63  Aligned_cols=105  Identities=19%  Similarity=0.303  Sum_probs=66.5

Q ss_pred             HHcCCCCCCEEEEEcCChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHHHHcCC----CeEEecCCCcccHHHHHHHHHH
Q 020768          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKELGA----DNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~~~~g~----~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      +....+++.+||-+|+|. |..+..+++..+ ...+++++.+++..+.+++.-.    ...+.+..  .+..+    .. 
T Consensus        45 ~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~--~d~~~----~~-  116 (239)
T PRK00216         45 KWLGVRPGDKVLDLACGT-GDLAIALAKAVGKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQ--GDAEA----LP-  116 (239)
T ss_pred             HHhCCCCCCeEEEeCCCC-CHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEe--ccccc----CC-
Confidence            445566788999999877 778888888775 2379999999988887766321    11111110  01110    00 


Q ss_pred             HhCCCccEEEEcCC------CHHHHHHHHHHcccCCEEEEEcCC
Q 020768          250 AMGTGIDVSFDCAG------FNKTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       250 ~~~~~~d~vid~~g------~~~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      .....+|+|+....      -...+..+.+.|+++|.++++...
T Consensus       117 ~~~~~~D~I~~~~~l~~~~~~~~~l~~~~~~L~~gG~li~~~~~  160 (239)
T PRK00216        117 FPDNSFDAVTIAFGLRNVPDIDKALREMYRVLKPGGRLVILEFS  160 (239)
T ss_pred             CCCCCccEEEEecccccCCCHHHHHHHHHHhccCCcEEEEEEec
Confidence            11346898874221      235678889999999999887643

>PLN02928 oxidoreductase family protein

Probab=94.45  E-value=0.35  Score=44.64  Aligned_cols=95  Identities=21%  Similarity=0.312  Sum_probs=58.1

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCC-----CeEEecCCCcccHHHHHHHHHHHhCCCc
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA-----DNIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~-----~~vi~~~~~~~~~~~~~~~~~~~~~~~~  255 (321)
                      .|.++.|+|.|.+|..+++.++.+|+ .|++.+++..+... ..++.     ...........+    +.++.    ...
T Consensus       158 ~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----L~ell----~~a  227 (347)
T PLN02928        158 FGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSWTSEPE-DGLLIPNGDVDDLVDEKGGHED----IYEFA----GEA  227 (347)
T ss_pred             CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCCChhhh-hhhccccccccccccccCcccC----HHHHH----hhC
Confidence            47899999999999999999999999 68888776332211 11110     000000001112    22222    246


Q ss_pred             cEEEEcCCCHH-H---H-HHHHHHcccCCEEEEEc
Q 020768          256 DVSFDCAGFNK-T---M-STALSATRAGGKVCLVG  285 (321)
Q Consensus       256 d~vid~~g~~~-~---~-~~~~~~l~~~G~~v~~g  285 (321)
                      |+|+.+..... +   + ...+..++++..++.+|
T Consensus       228 DiVvl~lPlt~~T~~li~~~~l~~Mk~ga~lINva  262 (347)
T PLN02928        228 DIVVLCCTLTKETAGIVNDEFLSSMKKGALLVNIA  262 (347)
T ss_pred             CEEEECCCCChHhhcccCHHHHhcCCCCeEEEECC
Confidence            89988776422 1   1 35678888888888887

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=94.41  E-value=0.11  Score=40.55  Aligned_cols=85  Identities=19%  Similarity=0.216  Sum_probs=50.4

Q ss_pred             CEEEEEcCChhHHHHHHHHHHcCCCeEEEEe-CChhHHHHHHH-cCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVD-VDDYRLSVAKE-LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~-~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      -+|-|+|+|.+|......++..|. .|..+. ++.+..+.+.. ++...+.+..+           +    -...|++|-
T Consensus        11 l~I~iIGaGrVG~~La~aL~~ag~-~v~~v~srs~~sa~~a~~~~~~~~~~~~~~-----------~----~~~aDlv~i   74 (127)
T PF10727_consen   11 LKIGIIGAGRVGTALARALARAGH-EVVGVYSRSPASAERAAAFIGAGAILDLEE-----------I----LRDADLVFI   74 (127)
T ss_dssp             -EEEEECTSCCCCHHHHHHHHTTS-EEEEESSCHH-HHHHHHC--TT-----TTG-----------G----GCC-SEEEE
T ss_pred             cEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeCCccccccccccccccccccccc-----------c----cccCCEEEE
Confidence            478999999999999999999998 566664 44445555543 44433322211           1    246899999


Q ss_pred             cCCCHHHHHHHHHHcccC-----CEEEEE
Q 020768          261 CAGFNKTMSTALSATRAG-----GKVCLV  284 (321)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~-----G~~v~~  284 (321)
                      ++.++ .+....+.|...     |++++-
T Consensus        75 avpDd-aI~~va~~La~~~~~~~g~iVvH  102 (127)
T PF10727_consen   75 AVPDD-AIAEVAEQLAQYGAWRPGQIVVH  102 (127)
T ss_dssp             -S-CC-HHHHHHHHHHCC--S-TT-EEEE
T ss_pred             EechH-HHHHHHHHHHHhccCCCCcEEEE
Confidence            99974 667777666554     665544

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=94.41  E-value=0.66  Score=41.86  Aligned_cols=93  Identities=19%  Similarity=0.174  Sum_probs=59.0

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCC
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  263 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  263 (321)
                      +|.++|.|.+|...+.-+...|. .+++.++++++.+.+++.|+...       .+..+..++     -...|+||-|+.
T Consensus         2 ~Ig~IGlG~mG~~mA~~L~~~g~-~v~v~dr~~~~~~~~~~~g~~~~-------~s~~~~~~~-----~~~advVi~~vp   68 (299)
T PRK12490          2 KLGLIGLGKMGGNMAERLREDGH-EVVGYDVNQEAVDVAGKLGITAR-------HSLEELVSK-----LEAPRTIWVMVP   68 (299)
T ss_pred             EEEEEcccHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCCeec-------CCHHHHHHh-----CCCCCEEEEEec
Confidence            57888999999988887777888 57788999888888777775321       111111111     123578888888


Q ss_pred             CHHHHHHH----HHHcccCCEEEEEcCCCC
Q 020768          264 FNKTMSTA----LSATRAGGKVCLVGMGHL  289 (321)
Q Consensus       264 ~~~~~~~~----~~~l~~~G~~v~~g~~~~  289 (321)
                      .+......    ...++++..++.++...+
T Consensus        69 ~~~~~~~v~~~i~~~l~~g~ivid~st~~~   98 (299)
T PRK12490         69 AGEVTESVIKDLYPLLSPGDIVVDGGNSRY   98 (299)
T ss_pred             CchHHHHHHHHHhccCCCCCEEEECCCCCc
Confidence            76343333    334555666666654444

>PRK08655 prephenate dehydrogenase; Provisional

Probab=94.39  E-value=0.46  Score=45.34  Aligned_cols=87  Identities=21%  Similarity=0.263  Sum_probs=53.1

Q ss_pred             EEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHH-HHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 020768          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRL-SVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (321)
Q Consensus       184 ~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~-~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  261 (321)
                      +|+|+|+ |.+|.+.+..++..|. .|++.++++++. +.+.++|+...    .   +..+.        -...|+||-|
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~-~V~v~~r~~~~~~~~a~~~gv~~~----~---~~~e~--------~~~aDvVIla   65 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGF-EVIVTGRDPKKGKEVAKELGVEYA----N---DNIDA--------AKDADIVIIS   65 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHcCCeec----c---CHHHH--------hccCCEEEEe
Confidence            6889985 9999999999999998 678888887764 56667775311    1   11111        1235777777


Q ss_pred             CCCHHH---HHHHHHHcccCCEEEEEcC
Q 020768          262 AGFNKT---MSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       262 ~g~~~~---~~~~~~~l~~~G~~v~~g~  286 (321)
                      +..+..   +..+...++++..++.++.
T Consensus        66 vp~~~~~~vl~~l~~~l~~~~iViDvsS   93 (437)
T PRK08655         66 VPINVTEDVIKEVAPHVKEGSLLMDVTS   93 (437)
T ss_pred             cCHHHHHHHHHHHHhhCCCCCEEEEccc
Confidence            664322   2223333455555666654

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=94.36  E-value=0.38  Score=45.25  Aligned_cols=34  Identities=38%  Similarity=0.561  Sum_probs=29.6

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~  215 (321)
                      ..+|+|+|+|++|..++..+...|...+..+|.+
T Consensus        42 ~~~VlviG~GGlGs~va~~La~~Gvg~i~lvD~D   75 (392)
T PRK07878         42 NARVLVIGAGGLGSPTLLYLAAAGVGTLGIVEFD   75 (392)
T ss_pred             cCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCC
Confidence            4689999999999999999999999888888643

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=94.33  E-value=0.22  Score=38.37  Aligned_cols=92  Identities=18%  Similarity=0.183  Sum_probs=54.9

Q ss_pred             EEEEEcC-ChhHHHHHHHHHHc-CCCeEEEEeCCh-hHHHHHHHcC----CCeEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768          184 NVLIMGA-GPIGLVTMLGARAF-GAPRIVIVDVDD-YRLSVAKELG----ADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       184 ~vlI~Ga-g~vG~~a~qla~~~-g~~~vv~v~~~~-~~~~~~~~~g----~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      +|.|+|+ |.+|...++++..+ .++.+.++.++. ....+...++    ...... .+  .+.    ..+     ..+|
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~--~~~----~~~-----~~~D   68 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSV-ED--ADP----EEL-----SDVD   68 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBE-EE--TSG----HHH-----TTES
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeE-ee--cch----hHh-----hcCC
Confidence            6899998 99999999988874 443344444544 2222222222    222211 11  111    111     5799


Q ss_pred             EEEEcCCCHHHHHHHHHHcccCCEEEEEcCC
Q 020768          257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      +||.|.+.....+..-..++.+-+++..+..
T Consensus        69 vvf~a~~~~~~~~~~~~~~~~g~~ViD~s~~   99 (121)
T PF01118_consen   69 VVFLALPHGASKELAPKLLKAGIKVIDLSGD   99 (121)
T ss_dssp             EEEE-SCHHHHHHHHHHHHHTTSEEEESSST
T ss_pred             EEEecCchhHHHHHHHHHhhCCcEEEeCCHH
Confidence            9999999765656666667888888888744

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=94.33  E-value=0.33  Score=41.74  Aligned_cols=80  Identities=24%  Similarity=0.272  Sum_probs=46.1

Q ss_pred             CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeC-ChhHHH-HHHHc---CCC-eEEecCC-CcccHHHHHHHHHHHhCCC
Q 020768          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV-DDYRLS-VAKEL---GAD-NIVKVST-NLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~-~~~~~~-~~~~~---g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~~  254 (321)
                      +++||+|+ |++|...+..+...|+ .++++.+ +.++.+ ...++   +.. ..+..+- +..+..+.+.++.+. .+.
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   78 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGY-RVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAE-LGP   78 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHH-cCC
Confidence            36899998 9999999999999999 4665554 443332 22222   211 1222111 122333333443332 356


Q ss_pred             ccEEEEcCCC
Q 020768          255 IDVSFDCAGF  264 (321)
Q Consensus       255 ~d~vid~~g~  264 (321)
                      +|.+|.+.|.
T Consensus        79 id~vi~~ag~   88 (242)
T TIGR01829        79 IDVLVNNAGI   88 (242)
T ss_pred             CcEEEECCCC
Confidence            8999999874

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=94.32  E-value=0.63  Score=45.93  Aligned_cols=95  Identities=14%  Similarity=0.115  Sum_probs=64.9

Q ss_pred             CEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcC
Q 020768          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  262 (321)
                      ++++|.|.|.+|...++.++..|. .++++|.++++.+.+++.|...+.- +..+   .+.+++   .+-..+|.++-++
T Consensus       418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~G-D~~~---~~~L~~---a~i~~a~~viv~~  489 (558)
T PRK10669        418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLG-NAAN---EEIMQL---AHLDCARWLLLTI  489 (558)
T ss_pred             CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEc-CCCC---HHHHHh---cCccccCEEEEEc
Confidence            689999999999999999999998 5899999999999999888655432 1111   223332   2235689888877


Q ss_pred             CCHHHH---HHHHHHcccCCEEEEEc
Q 020768          263 GFNKTM---STALSATRAGGKVCLVG  285 (321)
Q Consensus       263 g~~~~~---~~~~~~l~~~G~~v~~g  285 (321)
                      ++++.-   -.+.+...++-+++.-.
T Consensus       490 ~~~~~~~~iv~~~~~~~~~~~iiar~  515 (558)
T PRK10669        490 PNGYEAGEIVASAREKRPDIEIIARA  515 (558)
T ss_pred             CChHHHHHHHHHHHHHCCCCeEEEEE
Confidence            764322   12334445555665543

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=94.31  E-value=0.54  Score=43.82  Aligned_cols=34  Identities=32%  Similarity=0.558  Sum_probs=30.4

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~  215 (321)
                      ..+|+|+|+|++|..++..+...|...+..+|.+
T Consensus        41 ~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         41 NARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            5689999999999999999999999888888755

>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []

Probab=94.30  E-value=0.23  Score=43.51  Aligned_cols=108  Identities=27%  Similarity=0.393  Sum_probs=65.6

Q ss_pred             HHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHH
Q 020768          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKI  247 (321)
Q Consensus       173 ~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~  247 (321)
                      .+..++++||++|+=-|.|. |.++..++++.|- ..|+..+.++++.+.++    .+|....+.....  |..+..  +
T Consensus        32 I~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~--Dv~~~g--~  106 (247)
T PF08704_consen   32 ILMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHR--DVCEEG--F  106 (247)
T ss_dssp             HHHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES---GGCG----
T ss_pred             HHHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEec--ceeccc--c
Confidence            34678999999999876533 6666677776542 27999999998887764    4666532222111  111000  0


Q ss_pred             HHHhCCCccEEEEcCCCH-HHHHHHHHHc-ccCCEEEEEc
Q 020768          248 QKAMGTGIDVSFDCAGFN-KTMSTALSAT-RAGGKVCLVG  285 (321)
Q Consensus       248 ~~~~~~~~d~vid~~g~~-~~~~~~~~~l-~~~G~~v~~g  285 (321)
                      .+.....+|.||--...+ ..+..+.+.| +++|+++++.
T Consensus       107 ~~~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fs  146 (247)
T PF08704_consen  107 DEELESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFS  146 (247)
T ss_dssp             STT-TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEE
T ss_pred             cccccCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEEC
Confidence            000135688887766665 4788999999 8999999986

; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=94.30  E-value=0.35  Score=41.85  Aligned_cols=96  Identities=20%  Similarity=0.331  Sum_probs=65.3

Q ss_pred             ChhHHHHHHHHHHcCCCeEEEEeCChhH-----HHHHHHcCCCeEEecCCCc-ccHHHHHHHHHHHhCCCccEEEEcCCC
Q 020768          191 GPIGLVTMLGARAFGAPRIVIVDVDDYR-----LSVAKELGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVSFDCAGF  264 (321)
Q Consensus       191 g~vG~~a~qla~~~g~~~vv~v~~~~~~-----~~~~~~~g~~~vi~~~~~~-~~~~~~~~~~~~~~~~~~d~vid~~g~  264 (321)
                      +++|...++.+...|+ .|++++++.++     .++.++.+.. ++..+-.+ ++..+.+.+..+..++.+|+++.+.+.
T Consensus         6 ~GiG~aia~~l~~~Ga-~V~~~~~~~~~~~~~~~~l~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~a~~   83 (241)
T PF13561_consen    6 SGIGRAIARALAEEGA-NVILTDRNEEKLADALEELAKEYGAE-VIQCDLSDEESVEALFDEAVERFGGRIDILVNNAGI   83 (241)
T ss_dssp             SHHHHHHHHHHHHTTE-EEEEEESSHHHHHHHHHHHHHHTTSE-EEESCTTSHHHHHHHHHHHHHHHCSSESEEEEEEES
T ss_pred             CChHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHHHcCCc-eEeecCcchHHHHHHHHHHHhhcCCCeEEEEecccc
Confidence            6899999999999999 68888888876     2344556644 55544332 333444455444444789999987654


Q ss_pred             HH-----------------------------HHHHHHHHcccCCEEEEEcCCC
Q 020768          265 NK-----------------------------TMSTALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       265 ~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~  288 (321)
                      ..                             ..+.+.+.++++|.++.++...
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~  136 (241)
T PF13561_consen   84 SPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIA  136 (241)
T ss_dssp             CTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGG
T ss_pred             cccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchh
Confidence            21                             2556667888999999997543

...

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=94.30  E-value=0.89  Score=35.21  Aligned_cols=93  Identities=20%  Similarity=0.230  Sum_probs=54.7

Q ss_pred             EEEEEcC-ChhHHHHHHHHHH-cCCCeEEEEeCChh-H--HHHHHHcCCC--eEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768          184 NVLIMGA-GPIGLVTMLGARA-FGAPRIVIVDVDDY-R--LSVAKELGAD--NIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       184 ~vlI~Ga-g~vG~~a~qla~~-~g~~~vv~v~~~~~-~--~~~~~~~g~~--~vi~~~~~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      +|.|+|+ |-+|...++.+.. .+.+.+.+++++++ .  .+...-.|..  .+...    .+    +.++.    ..+|
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~----~~----l~~~~----~~~D   69 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVT----DD----LEELL----EEAD   69 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEB----S-----HHHHT----TH-S
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccc----hh----HHHhc----ccCC
Confidence            6899999 9999999999998 67754555666551 1  1111111211  11111    11    22321    2389


Q ss_pred             EEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC
Q 020768          257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL  289 (321)
Q Consensus       257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  289 (321)
                      ++||++. ++.....++.+...|.-+.+|.++-
T Consensus        70 VvIDfT~-p~~~~~~~~~~~~~g~~~ViGTTG~  101 (124)
T PF01113_consen   70 VVIDFTN-PDAVYDNLEYALKHGVPLVIGTTGF  101 (124)
T ss_dssp             EEEEES--HHHHHHHHHHHHHHT-EEEEE-SSS
T ss_pred             EEEEcCC-hHHhHHHHHHHHhCCCCEEEECCCC
Confidence            9999984 6777777777777788888887654

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=94.26  E-value=1.1  Score=40.23  Aligned_cols=113  Identities=18%  Similarity=0.138  Sum_probs=66.9

Q ss_pred             CCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-Hc--CCCe--EEecCCCcccHHHHHHHHHHH-h
Q 020768          179 IGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-EL--GADN--IVKVSTNLQDIAEEVEKIQKA-M  251 (321)
Q Consensus       179 ~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~--g~~~--vi~~~~~~~~~~~~~~~~~~~-~  251 (321)
                      -..+.-|+|+|+ +++|...+.-+...|++ |++..-.++..+.++ +.  +--.  ..|. ++++...+..+-..+. .
T Consensus        26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~-V~Agcl~~~gae~L~~~~~s~rl~t~~LDV-T~~esi~~a~~~V~~~l~  103 (322)
T KOG1610|consen   26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFR-VFAGCLTEEGAESLRGETKSPRLRTLQLDV-TKPESVKEAAQWVKKHLG  103 (322)
T ss_pred             ccCCcEEEEecCCcHHHHHHHHHHHhcCCE-EEEEeecCchHHHHhhhhcCCcceeEeecc-CCHHHHHHHHHHHHHhcc
Confidence            345567999999 99999999999999995 555445554444333 22  2111  2222 2333333333333322 2


Q ss_pred             CCCccEEEEcCCCH--------------------------HHHHHHHHHcc-cCCEEEEEcCCCCCccc
Q 020768          252 GTGIDVSFDCAGFN--------------------------KTMSTALSATR-AGGKVCLVGMGHLEMTV  293 (321)
Q Consensus       252 ~~~~d~vid~~g~~--------------------------~~~~~~~~~l~-~~G~~v~~g~~~~~~~~  293 (321)
                      ..+.=.+++++|-.                          +.....+.+++ ..||++.+++..+..+.
T Consensus       104 ~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~~  172 (322)
T KOG1610|consen  104 EDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVAL  172 (322)
T ss_pred             cccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCccC
Confidence            45577888888721                          22344555664 45999999977665554

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=94.24  E-value=0.88  Score=41.10  Aligned_cols=44  Identities=20%  Similarity=0.163  Sum_probs=36.1

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCC
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD  228 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~  228 (321)
                      +|.|+|.|.+|...+.-+...|. .+++.++++++.+.+.+.|+.
T Consensus         2 ~Ig~IGlG~MG~~mA~~L~~~g~-~v~v~dr~~~~~~~~~~~g~~   45 (301)
T PRK09599          2 QLGMIGLGRMGGNMARRLLRGGH-EVVGYDRNPEAVEALAEEGAT   45 (301)
T ss_pred             EEEEEcccHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCCe
Confidence            58889999999988877777888 588889999888877777653

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=94.19  E-value=1.4  Score=37.84  Aligned_cols=93  Identities=14%  Similarity=0.053  Sum_probs=56.6

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh-hHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-YRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      .+.+|||+|+|.++.-=+..+...|+. |.+++..- +....+.+.|.-..+.   .  ++.+.  .     -.++++||
T Consensus        24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA~-VtVVap~i~~el~~l~~~~~i~~~~---r--~~~~~--d-----l~g~~LVi   90 (223)
T PRK05562         24 NKIKVLIIGGGKAAFIKGKTFLKKGCY-VYILSKKFSKEFLDLKKYGNLKLIK---G--NYDKE--F-----IKDKHLIV   90 (223)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcCCCCHHHHHHHhCCCEEEEe---C--CCChH--H-----hCCCcEEE
Confidence            467999999999999888888889984 55554332 2222222223211221   1  11111  1     14689999


Q ss_pred             EcCCCHHHHHHHHHHcccCCEEEEEcC
Q 020768          260 DCAGFNKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       260 d~~g~~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      -|+..++.=+.+....+..+.++.+..
T Consensus        91 aATdD~~vN~~I~~~a~~~~~lvn~vd  117 (223)
T PRK05562         91 IATDDEKLNNKIRKHCDRLYKLYIDCS  117 (223)
T ss_pred             ECCCCHHHHHHHHHHHHHcCCeEEEcC
Confidence            999986555566666666677777653

>PRK05599 hypothetical protein; Provisional

Probab=94.18  E-value=0.65  Score=40.40  Aligned_cols=78  Identities=18%  Similarity=0.230  Sum_probs=47.1

Q ss_pred             EEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCe--EEecCC-CcccHHHHHHHHHHHhCCCc
Q 020768          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN--IVKVST-NLQDIAEEVEKIQKAMGTGI  255 (321)
Q Consensus       184 ~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~--vi~~~~-~~~~~~~~~~~~~~~~~~~~  255 (321)
                      +++|+|+ +++|...+..+. .|. .|+.+.++.++.+.+    ++.|...  .+..+- +.++..+.+.++.+. .+++
T Consensus         2 ~vlItGas~GIG~aia~~l~-~g~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g~i   78 (246)
T PRK05599          2 SILILGGTSDIAGEIATLLC-HGE-DVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQEL-AGEI   78 (246)
T ss_pred             eEEEEeCccHHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHh-cCCC
Confidence            5899998 999988888766 487 677777777665433    2334322  222222 222333333443332 3579


Q ss_pred             cEEEEcCCC
Q 020768          256 DVSFDCAGF  264 (321)
Q Consensus       256 d~vid~~g~  264 (321)
                      |+++.+.|.
T Consensus        79 d~lv~nag~   87 (246)
T PRK05599         79 SLAVVAFGI   87 (246)
T ss_pred             CEEEEecCc
Confidence            999998875

>PRK06849 hypothetical protein; Provisional

Probab=94.17  E-value=0.79  Score=42.97  Aligned_cols=98  Identities=20%  Similarity=0.175  Sum_probs=60.2

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEec---CCCcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV---STNLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~---~~~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      ...+|||+|+ .+.++..+..++..|. .|+++++++.......+ .++.....   ....+++.+.+.++.+  ..++|
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~s~-~~d~~~~~p~p~~d~~~~~~~L~~i~~--~~~id   78 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRFSR-AVDGFYTIPSPRWDPDAYIQALLSIVQ--RENID   78 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHH-hhhheEEeCCCCCCHHHHHHHHHHHHH--HcCCC
Confidence            4578999999 6789999999999999 68888877644332211 23333222   1223445666666544  35689


Q ss_pred             EEEEcCCCHHHHHHHHHHcccCCEEE
Q 020768          257 VSFDCAGFNKTMSTALSATRAGGKVC  282 (321)
Q Consensus       257 ~vid~~g~~~~~~~~~~~l~~~G~~v  282 (321)
                      ++|-+......+....+.+.++.++.
T Consensus        79 ~vIP~~e~~~~~a~~~~~l~~~~~v~  104 (389)
T PRK06849         79 LLIPTCEEVFYLSHAKEELSAYCEVL  104 (389)
T ss_pred             EEEECChHHHhHHhhhhhhcCCcEEE
Confidence            99987664322333345566655443

>PRK07102 short chain dehydrogenase; Provisional

Probab=94.17  E-value=0.37  Score=41.65  Aligned_cols=37  Identities=32%  Similarity=0.384  Sum_probs=31.0

Q ss_pred             CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHH
Q 020768          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS  220 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~  220 (321)
                      .+++|+|+ |++|...++.+...|. .|+++++++++.+
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~   39 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLE   39 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHH
Confidence            47999998 9999999999988998 5888888776654

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.16  E-value=0.49  Score=42.76  Aligned_cols=81  Identities=25%  Similarity=0.348  Sum_probs=47.1

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCC-hhHH-HHH---HHcCCCeE-EecCCC-cccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD-DYRL-SVA---KELGADNI-VKVSTN-LQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~-~~~~-~~~---~~~g~~~v-i~~~~~-~~~~~~~~~~~~~~~~  252 (321)
                      .|.++||+|+ +++|...++.+...|+ .|++++.+ .++. +.+   +..|.... +..+-. .++..+.+....+  .
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~--~   87 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG--L   87 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH--h
Confidence            4678999998 9999999988888999 56666543 2222 222   23343221 111111 1222222233222  3


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      +++|++|.+.|.
T Consensus        88 g~iD~li~nAG~   99 (306)
T PRK07792         88 GGLDIVVNNAGI   99 (306)
T ss_pred             CCCCEEEECCCC
Confidence            579999999874

>PRK08278 short chain dehydrogenase; Provisional

Probab=94.14  E-value=0.64  Score=41.15  Aligned_cols=82  Identities=26%  Similarity=0.296  Sum_probs=48.4

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhH-------H-HH---HHHcCCCe-EEecC-CCcccHHHHHHH
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYR-------L-SV---AKELGADN-IVKVS-TNLQDIAEEVEK  246 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~-------~-~~---~~~~g~~~-vi~~~-~~~~~~~~~~~~  246 (321)
                      .+.+++|+|+ |++|...+..+...|+ .|++++++.++       . +.   ++..+... .+..+ .+.++..+.+.+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~   83 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAK   83 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence            4678999998 9999999998888998 57777665432       1 11   22333322 11111 112233333333


Q ss_pred             HHHHhCCCccEEEEcCCC
Q 020768          247 IQKAMGTGIDVSFDCAGF  264 (321)
Q Consensus       247 ~~~~~~~~~d~vid~~g~  264 (321)
                      +.+. .+.+|++|.+.|.
T Consensus        84 ~~~~-~g~id~li~~ag~  100 (273)
T PRK08278         84 AVER-FGGIDICVNNASA  100 (273)
T ss_pred             HHHH-hCCCCEEEECCCC
Confidence            3222 2479999999884

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=94.12  E-value=0.6  Score=40.35  Aligned_cols=82  Identities=20%  Similarity=0.253  Sum_probs=47.3

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEE-eCChhHHH-HHH---HcCCCe-EEecCCC-cccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIV-DVDDYRLS-VAK---ELGADN-IVKVSTN-LQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v-~~~~~~~~-~~~---~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~  252 (321)
                      .+.+++|+|+ |++|...+..+...|.+ ++++ .+++++.+ ...   +.+... .+..+-. .....+.+.+..+. .
T Consensus         5 ~~~~~lItG~s~~iG~~la~~l~~~g~~-v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   82 (247)
T PRK12935          5 NGKVAIVTGGAKGIGKAITVALAQEGAK-VVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNH-F   82 (247)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCE-EEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-c
Confidence            3689999998 99999999988889995 5444 33333332 222   233221 2222221 12233333333322 3


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      +.+|++|.+.|.
T Consensus        83 ~~id~vi~~ag~   94 (247)
T PRK12935         83 GKVDILVNNAGI   94 (247)
T ss_pred             CCCCEEEECCCC
Confidence            468999999875

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.11  E-value=0.69  Score=40.53  Aligned_cols=104  Identities=18%  Similarity=0.317  Sum_probs=61.2

Q ss_pred             CCCEEEEEcC---ChhHHHHHHHHHHcCCCeEEEEeCCh--hHH-HHHHHcCCC-eEEecCC-CcccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVDD--YRL-SVAKELGAD-NIVKVST-NLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga---g~vG~~a~qla~~~g~~~vv~v~~~~--~~~-~~~~~~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~  252 (321)
                      .+++++|+|+   +++|...++.+...|+ +|+.++++.  +.. +..++++.. ..+..+- +.++..+.+.++.+. .
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~-~   83 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGA-EVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREH-V   83 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCC-EEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHH-c
Confidence            4678999985   6999999988888999 577665442  332 233444421 1222221 122333333333222 3


Q ss_pred             CCccEEEEcCCCHH-----------------------------HHHHHHHHcccCCEEEEEcC
Q 020768          253 TGIDVSFDCAGFNK-----------------------------TMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       253 ~~~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~  286 (321)
                      +++|++|++.|...                             ..+.++..++++|+++.++.
T Consensus        84 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~  146 (256)
T PRK07889         84 DGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDF  146 (256)
T ss_pred             CCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEee
Confidence            57999999887420                             12345566677788888764

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=94.10  E-value=0.49  Score=47.29  Aligned_cols=95  Identities=14%  Similarity=0.156  Sum_probs=65.8

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  261 (321)
                      .++|+|.|.|.+|+..++.++..|. .+++++.++++.+.+++.|...+.- +..+   .+.+++   .+-..+|.++-+
T Consensus       400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~G-Dat~---~~~L~~---agi~~A~~vvv~  471 (621)
T PRK03562        400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFYG-DATR---MDLLES---AGAAKAEVLINA  471 (621)
T ss_pred             cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEEE-eCCC---HHHHHh---cCCCcCCEEEEE
Confidence            3689999999999999999999998 5899999999999999988654332 2211   222222   234568999999


Q ss_pred             CCCHHHHHHH---HHHcccCCEEEEE
Q 020768          262 AGFNKTMSTA---LSATRAGGKVCLV  284 (321)
Q Consensus       262 ~g~~~~~~~~---~~~l~~~G~~v~~  284 (321)
                      +.+++.-..+   .+.+.|+-+++.-
T Consensus       472 ~~d~~~n~~i~~~ar~~~p~~~iiaR  497 (621)
T PRK03562        472 IDDPQTSLQLVELVKEHFPHLQIIAR  497 (621)
T ss_pred             eCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence            9886543333   3344555555443

>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase

Probab=94.09  E-value=0.51  Score=43.10  Aligned_cols=102  Identities=21%  Similarity=0.286  Sum_probs=61.5

Q ss_pred             EEEEEcCChhHHHHHHHHHHcC----CCeEEEEeC--ChhHHHHHHHcCCCe------------EEecCCCcccHH--HH
Q 020768          184 NVLIMGAGPIGLVTMLGARAFG----APRIVIVDV--DDYRLSVAKELGADN------------IVKVSTNLQDIA--EE  243 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g----~~~vv~v~~--~~~~~~~~~~~g~~~------------vi~~~~~~~~~~--~~  243 (321)
                      +|.|.|.|.+|...++.+...+    + .++.+..  +.+...++.++.-.+            .+.+....-...  ..
T Consensus         1 ~IaInGfGrIGR~vlr~l~e~~~~~~~-~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~   79 (325)
T TIGR01532         1 RVAINGFGRIGRNVLRALYESGERLGI-EVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT   79 (325)
T ss_pred             CEEEECCCHHHHHHHHHHHhcCCCCCe-EEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence            4789999999999999987653    5 3555432  233444554433110            001111000000  00


Q ss_pred             HHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCC
Q 020768          244 VEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       244 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      ..++.. ...++|+||+|+|.....+.+...+..|++.+.++.+
T Consensus        80 p~~~~w-~~~gvDiVie~tG~~~s~e~a~~~l~aGa~~V~~SaP  122 (325)
T TIGR01532        80 PEALPW-RALGVDLVLDCTGVYGNREQGERHIRAGAKRVLFSHP  122 (325)
T ss_pred             hhhccc-cccCCCEEEEccchhccHHHHHHHHHcCCeEEEecCC
Confidence            111100 1258999999999988888889999999999999866

Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.

>PRK05134 bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase; Provisional

Probab=94.09  E-value=0.34  Score=41.79  Aligned_cols=98  Identities=20%  Similarity=0.184  Sum_probs=61.3

Q ss_pred             cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHc----CCCeEEecCCCcccHHHHHHHHHHHhC
Q 020768          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL----GADNIVKVSTNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~----g~~~vi~~~~~~~~~~~~~~~~~~~~~  252 (321)
                      ....++.+||-+|+|. |..+..+++. +. .+++++.+++..+.+++.    +..  +.+..  .++.+..    ...+
T Consensus        44 ~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~iD~s~~~~~~a~~~~~~~~~~--~~~~~--~~~~~~~----~~~~  112 (233)
T PRK05134         44 AGGLFGKRVLDVGCGG-GILSESMARL-GA-DVTGIDASEENIEVARLHALESGLK--IDYRQ--TTAEELA----AEHP  112 (233)
T ss_pred             ccCCCCCeEEEeCCCC-CHHHHHHHHc-CC-eEEEEcCCHHHHHHHHHHHHHcCCc--eEEEe--cCHHHhh----hhcC
Confidence            3456788999999864 6666777764 66 689999988877766542    221  11111  1222211    1124


Q ss_pred             CCccEEEE-----cCCC-HHHHHHHHHHcccCCEEEEEc
Q 020768          253 TGIDVSFD-----CAGF-NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       253 ~~~d~vid-----~~g~-~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      ..+|+|+-     ...+ ...+..+.+.|+++|++++..
T Consensus       113 ~~fD~Ii~~~~l~~~~~~~~~l~~~~~~L~~gG~l~v~~  151 (233)
T PRK05134        113 GQFDVVTCMEMLEHVPDPASFVRACAKLVKPGGLVFFST  151 (233)
T ss_pred             CCccEEEEhhHhhccCCHHHHHHHHHHHcCCCcEEEEEe
Confidence            67999964     3333 235678889999999988654

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=94.06  E-value=0.64  Score=41.71  Aligned_cols=86  Identities=13%  Similarity=0.142  Sum_probs=56.1

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCC
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  263 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  263 (321)
                      +|.|+|.|.+|...+..+...|. .|++.++++++.+.+.+.|....       .+..+.+        ...|+||.|+.
T Consensus         1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~~~~~~--------~~aDivi~~vp   64 (291)
T TIGR01505         1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGAVTA-------ETARQVT--------EQADVIFTMVP   64 (291)
T ss_pred             CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCccc-------CCHHHHH--------hcCCEEEEecC
Confidence            37788999999988888888898 68888999998888887775321       1111111        24688888888


Q ss_pred             CHHHHHHHH-------HHcccCCEEEEEc
Q 020768          264 FNKTMSTAL-------SATRAGGKVCLVG  285 (321)
Q Consensus       264 ~~~~~~~~~-------~~l~~~G~~v~~g  285 (321)
                      ........+       ..++++-.++..+
T Consensus        65 ~~~~~~~v~~~~~~~~~~~~~g~iivd~s   93 (291)
T TIGR01505        65 DSPQVEEVAFGENGIIEGAKPGKTLVDMS   93 (291)
T ss_pred             CHHHHHHHHcCcchHhhcCCCCCEEEECC
Confidence            654433332       3344544555444

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PLN02490 MPBQ/MSBQ methyltransferase

Probab=94.04  E-value=0.39  Score=44.16  Aligned_cols=105  Identities=22%  Similarity=0.297  Sum_probs=65.7

Q ss_pred             HHHcCC-CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhC
Q 020768          174 CRRANI-GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       174 l~~~~~-~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~  252 (321)
                      ++...+ +++.+||=+|+|. |..+..+++..+...++++|.+++-.+.+++.....-+....  .+.    .++. ...
T Consensus       105 l~~~~l~~~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i~--gD~----e~lp-~~~  176 (340)
T PLN02490        105 LEPADLSDRNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIE--GDA----EDLP-FPT  176 (340)
T ss_pred             HhhcccCCCCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEEe--ccH----HhCC-CCC
Confidence            344444 4678999898865 777777888765457999999988877776532111011100  111    1110 013


Q ss_pred             CCccEEEEcCC-----C-HHHHHHHHHHcccCCEEEEEcC
Q 020768          253 TGIDVSFDCAG-----F-NKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       253 ~~~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      ..+|+|+.+..     + ...++.+.+.|+++|++++.+.
T Consensus       177 ~sFDvVIs~~~L~~~~d~~~~L~e~~rvLkPGG~LvIi~~  216 (340)
T PLN02490        177 DYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACLIGP  216 (340)
T ss_pred             CceeEEEEcChhhhCCCHHHHHHHHHHhcCCCcEEEEEEe
Confidence            45898886421     1 3467899999999999988763

>PRK07411 hypothetical protein; Validated

Probab=94.04  E-value=0.43  Score=44.81  Aligned_cols=34  Identities=41%  Similarity=0.533  Sum_probs=30.0

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~  215 (321)
                      ..+|+|.|+|++|..+++.+-..|...+..+|.+
T Consensus        38 ~~~VlivG~GGlG~~va~~La~~Gvg~l~lvD~D   71 (390)
T PRK07411         38 AASVLCIGTGGLGSPLLLYLAAAGIGRIGIVDFD   71 (390)
T ss_pred             cCcEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            4689999999999999999999999888888643

>PLN00203 glutamyl-tRNA reductase

Probab=94.02  E-value=0.4  Score=46.67  Aligned_cols=75  Identities=21%  Similarity=0.374  Sum_probs=51.6

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      +.+|+|+|+|.+|.+++..+...|+..++++.++.++.+.+ .+++...+..     ..+. .+.+.    -...|+||.
T Consensus       266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~-----~~~~-dl~~a----l~~aDVVIs  335 (519)
T PLN00203        266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIY-----KPLD-EMLAC----AAEADVVFT  335 (519)
T ss_pred             CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEe-----ecHh-hHHHH----HhcCCEEEE
Confidence            67899999999999999999999987899999998876654 4564211111     0111 11111    246899999


Q ss_pred             cCCCHH
Q 020768          261 CAGFNK  266 (321)
Q Consensus       261 ~~g~~~  266 (321)
                      |++.+.
T Consensus       336 AT~s~~  341 (519)
T PLN00203        336 STSSET  341 (519)
T ss_pred             ccCCCC
Confidence            987654

>PRK06123 short chain dehydrogenase; Provisional

Probab=94.00  E-value=0.65  Score=40.14  Aligned_cols=81  Identities=20%  Similarity=0.245  Sum_probs=46.5

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEe-CChhHHHH----HHHcCCCe-EEecCC-CcccHHHHHHHHHHHhCC
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVD-VDDYRLSV----AKELGADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~-~~~~~~~~----~~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      +.++||+|+ |++|...++.+...|+. ++.+. +++++.+.    ++..+... .+..+- +.....+.+.++.+. .+
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~-vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~   79 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYA-VCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRE-LG   79 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCe-EEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHH-hC
Confidence            457999998 99999998888888985 55443 44433322    23334322 222211 122333333333322 35


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      .+|++|.+.|.
T Consensus        80 ~id~li~~ag~   90 (248)
T PRK06123         80 RLDALVNNAGI   90 (248)
T ss_pred             CCCEEEECCCC
Confidence            78999998875

>PRK10258 biotin biosynthesis protein BioC; Provisional

Probab=93.99  E-value=0.86  Score=39.82  Aligned_cols=99  Identities=20%  Similarity=0.305  Sum_probs=63.9

Q ss_pred             HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCC-CeEEecCCCcccHHHHHHHHHHHhCC
Q 020768          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA-DNIVKVSTNLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~-~~vi~~~~~~~~~~~~~~~~~~~~~~  253 (321)
                      +.....++.+||-+|+|. |..+..+++ .|. .++++|.+++..+.+++... ...+.-     +..    .+. ....
T Consensus        36 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~~-----d~~----~~~-~~~~  102 (251)
T PRK10258         36 AMLPQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLAG-----DIE----SLP-LATA  102 (251)
T ss_pred             HhcCccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEEc-----Ccc----cCc-CCCC
Confidence            334445678899999865 666655554 565 79999999999988887543 222221     110    110 1134


Q ss_pred             CccEEEEcCCC------HHHHHHHHHHcccCCEEEEEcC
Q 020768          254 GIDVSFDCAGF------NKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       254 ~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      .+|+|+....-      ...+..+.+.|+++|.+++...
T Consensus       103 ~fD~V~s~~~l~~~~d~~~~l~~~~~~Lk~gG~l~~~~~  141 (251)
T PRK10258        103 TFDLAWSNLAVQWCGNLSTALRELYRVVRPGGVVAFTTL  141 (251)
T ss_pred             cEEEEEECchhhhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence            68999864321      2457788899999999987753

>PRK14901 16S rRNA methyltransferase B; Provisional

Probab=93.99  E-value=0.76  Score=43.84  Aligned_cols=106  Identities=21%  Similarity=0.242  Sum_probs=62.5

Q ss_pred             HHcCCCCCCEEEEEcCChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHH
Q 020768          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      ....+++|++||=.|+|+ |..+..+++.++ ...|++++.++++.+.++    .+|.+.+.....+..++.   ... .
T Consensus       246 ~~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~rl~~~~~n~~r~g~~~v~~~~~D~~~~~---~~~-~  320 (434)
T PRK14901        246 PLLDPQPGEVILDACAAP-GGKTTHIAELMGDQGEIWAVDRSASRLKKLQENAQRLGLKSIKILAADSRNLL---ELK-P  320 (434)
T ss_pred             HHhCCCCcCEEEEeCCCC-chhHHHHHHHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCeEEEEeCChhhcc---ccc-c
Confidence            345678899988776633 333445555543 236999999998887654    577765332222111111   000 0


Q ss_pred             HhCCCccEEEE---cCCC-------------------------HHHHHHHHHHcccCCEEEEEc
Q 020768          250 AMGTGIDVSFD---CAGF-------------------------NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       250 ~~~~~~d~vid---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      .....||.|+-   |+|.                         .+.+..+++.|++||+++..-
T Consensus       321 ~~~~~fD~Vl~DaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lkpgG~lvyst  384 (434)
T PRK14901        321 QWRGYFDRILLDAPCSGLGTLHRHPDARWRQTPEKIQELAPLQAELLESLAPLLKPGGTLVYAT  384 (434)
T ss_pred             cccccCCEEEEeCCCCcccccccCcchhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence            01246898874   4442                         135788899999999987554

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=93.97  E-value=1.2  Score=42.26  Aligned_cols=99  Identities=17%  Similarity=0.184  Sum_probs=62.8

Q ss_pred             CEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh-------CCCc
Q 020768          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM-------GTGI  255 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~-------~~~~  255 (321)
                      .+|.|+|.|.+|...+..+...|. .|++.+.++++.+.++. |...+  .   .++..+.+.+....+       ....
T Consensus         4 ~kI~VIGlG~~G~~~A~~La~~G~-~V~~~D~~~~~v~~l~~-g~~~~--~---e~~l~~~l~~~~~~g~l~~~~~~~~a   76 (415)
T PRK11064          4 ETISVIGLGYIGLPTAAAFASRQK-QVIGVDINQHAVDTINR-GEIHI--V---EPDLDMVVKTAVEGGYLRATTTPEPA   76 (415)
T ss_pred             cEEEEECcchhhHHHHHHHHhCCC-EEEEEeCCHHHHHHHHC-CCCCc--C---CCCHHHHHHHHhhcCceeeecccccC
Confidence            579999999999988888888898 69999999999887553 33221  1   123333333221100       1258


Q ss_pred             cEEEEcCCCH---------HHH----HHHHHHcccCCEEEEEcCCC
Q 020768          256 DVSFDCAGFN---------KTM----STALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       256 d~vid~~g~~---------~~~----~~~~~~l~~~G~~v~~g~~~  288 (321)
                      |++|-|++.+         ..+    +.+...++++..++..+...
T Consensus        77 Dvvii~vptp~~~~~~~dl~~v~~~~~~i~~~l~~g~iVI~~STv~  122 (415)
T PRK11064         77 DAFLIAVPTPFKGDHEPDLTYVEAAAKSIAPVLKKGDLVILESTSP  122 (415)
T ss_pred             CEEEEEcCCCCCCCCCcChHHHHHHHHHHHHhCCCCCEEEEeCCCC
Confidence            9999999985         233    33445566655555555433

>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase

Probab=93.94  E-value=2.6  Score=37.29  Aligned_cols=101  Identities=22%  Similarity=0.226  Sum_probs=61.6

Q ss_pred             HcCCCCCCEEEEEcCChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHH
Q 020768          176 RANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKA  250 (321)
Q Consensus       176 ~~~~~~g~~vlI~Gag~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~~  250 (321)
                      ...+++|++||=.|+|+ |..++.+++.++ ...|++++.++++.+.++    ++|.+.+.....+   ..    .+...
T Consensus        66 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~D---~~----~~~~~  137 (264)
T TIGR00446        66 ALEPDPPERVLDMAAAP-GGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTNFD---GR----VFGAA  137 (264)
T ss_pred             HhCCCCcCEEEEECCCc-hHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEecCC---HH----Hhhhh
Confidence            34678999987777643 444445555442 236999999999877664    4566543322221   11    11111


Q ss_pred             hCCCccEEEE---cCCC-------------------------HHHHHHHHHHcccCCEEEEEc
Q 020768          251 MGTGIDVSFD---CAGF-------------------------NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       251 ~~~~~d~vid---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~g  285 (321)
                       ...+|.|+-   |+|.                         .+.+..+++.|+++|+++...
T Consensus       138 -~~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpgG~lvYst  199 (264)
T TIGR00446       138 -VPKFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPGGVLVYST  199 (264)
T ss_pred             -ccCCCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence             235998875   4443                         126778889999999987554

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=93.92  E-value=0.44  Score=42.77  Aligned_cols=39  Identities=26%  Similarity=0.268  Sum_probs=33.5

Q ss_pred             CEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH
Q 020768          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA  222 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~  222 (321)
                      .+|.|+|+|.+|...++.+...|. .|+..+.++++.+.+
T Consensus         4 ~~I~ViGaG~mG~~iA~~la~~G~-~V~l~d~~~~~l~~~   42 (291)
T PRK06035          4 KVIGVVGSGVMGQGIAQVFARTGY-DVTIVDVSEEILKNA   42 (291)
T ss_pred             cEEEEECccHHHHHHHHHHHhcCC-eEEEEeCCHHHHHHH
Confidence            579999999999999998888898 688899998887644

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=93.92  E-value=0.41  Score=43.06  Aligned_cols=95  Identities=16%  Similarity=0.140  Sum_probs=55.6

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCC
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  263 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  263 (321)
                      +|+|+|+|.+|...+..+...|. .|..+++++++.+.+++.|...  . +...........+...  ...+|++|-++.
T Consensus         2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~--~-~~~~~~~~~~~~~~~~--~~~~d~vila~k   75 (304)
T PRK06522          2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL--E-DGEITVPVLAADDPAE--LGPQDLVILAVK   75 (304)
T ss_pred             EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc--c-CCceeecccCCCChhH--cCCCCEEEEecc
Confidence            58999999999988888888887 5777777777777776656421  0 0000000000001111  156899999988


Q ss_pred             CHHHHHHHH----HHcccCCEEEEEc
Q 020768          264 FNKTMSTAL----SATRAGGKVCLVG  285 (321)
Q Consensus       264 ~~~~~~~~~----~~l~~~G~~v~~g  285 (321)
                      ... ...++    ..+.++..++.+.
T Consensus        76 ~~~-~~~~~~~l~~~l~~~~~iv~~~  100 (304)
T PRK06522         76 AYQ-LPAALPSLAPLLGPDTPVLFLQ  100 (304)
T ss_pred             ccc-HHHHHHHHhhhcCCCCEEEEec
Confidence            643 33333    3444455666543

>PLN02589 caffeoyl-CoA O-methyltransferase

Probab=93.92  E-value=0.99  Score=39.55  Aligned_cols=106  Identities=12%  Similarity=0.161  Sum_probs=69.7

Q ss_pred             cCCCCCCEEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      .+....++||-+|. .+|+.++.+|+.++- .++++++.+++..+.++    +.|...-+.+..  .+..+.+.++...+
T Consensus        75 ~~~~~ak~iLEiGT-~~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~--G~a~e~L~~l~~~~  151 (247)
T PLN02589         75 LKLINAKNTMEIGV-YTGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFRE--GPALPVLDQMIEDG  151 (247)
T ss_pred             HHHhCCCEEEEEeC-hhhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe--ccHHHHHHHHHhcc
Confidence            34455678888885 568888888887631 27999999988777664    456544333322  34555555553321


Q ss_pred             --CCCccEEEEcCCCH---HHHHHHHHHcccCCEEEEEc
Q 020768          252 --GTGIDVSFDCAGFN---KTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       252 --~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g  285 (321)
                        .+.||+||--....   ..++.+++.|++||.++.=.
T Consensus       152 ~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~DN  190 (247)
T PLN02589        152 KYHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGYDN  190 (247)
T ss_pred             ccCCcccEEEecCCHHHhHHHHHHHHHhcCCCeEEEEcC
Confidence              25799998754432   35778899999999987554

>PRK11761 cysM cysteine synthase B; Provisional

Probab=93.87  E-value=2.6  Score=37.95  Aligned_cols=59  Identities=20%  Similarity=0.270  Sum_probs=46.2

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeC--ChhHHHHHHHcCCCeEEe
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV--DDYRLSVAKELGADNIVK  232 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~--~~~~~~~~~~~g~~~vi~  232 (321)
                      .+...+.+|++|+....|..|++.+..|+.+|.+.++++..  +++|.+.++.+|++.+..
T Consensus        55 ~~~g~~~~g~~vv~aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~  115 (296)
T PRK11761         55 EKRGEIKPGDTLIEATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRAYGAELILV  115 (296)
T ss_pred             HHcCCCCCCCEEEEeCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEe
Confidence            34555678888766666999999999999999987777753  458888999999876654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	321
1e3j_A	352	Ketose Reductase (Sorbitol Dehydrogenase) From Silv		3e-77
1pl7_A	356	Human Sorbitol Dehydrogenase (Apo) Length = 356		3e-72
3qe3_A	355	Sheep Liver Sorbitol Dehydrogenase Length = 355		1e-71
1pl6_A	356	Human SdhNADHINHIBITOR COMPLEX Length = 356		1e-70
3m6i_A	363	L-Arabinitol 4-Dehydrogenase Length = 363		2e-48
4ej6_A	370	Crystal Structure Of A Putative Zinc-Binding Dehydr		3e-36
2dfv_A	347	Hyperthermophilic Threonine Dehydrogenase From Pyro		5e-33
2d8a_A	348	Crystal Structure Of Ph0655 From Pyrococcus Horikos		5e-33
3gfb_A	350	L-Threonine Dehydrogenase (Tktdh) From The Hyperthe		2e-32
2dq4_A	343	Crystal Structure Of Threonine 3-Dehydrogenase Leng		6e-31
1rjw_A	339	Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd		2e-28
3pii_A	339	Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog		3e-28
4a2c_A	346	Crystal Structure Of Galactitol-1-Phosphate Dehydro		4e-27
4ilk_A	359	Crystal Structure Of Short Chain Alcohol Dehydrogen		4e-25
2eih_A	343	Crystal Structure Of Nad-Dependent Alcohol Dehydrog		4e-24
2eer_A	347	Structural Study Of Project Id St2577 From Sulfolob		9e-24
3fpl_A	351	Chimera Of Alcohol Dehydrogenase By Exchange Of The		1e-23
1ykf_A	352	Nadp-Dependent Alcohol Dehydrogenase From Thermoana		5e-23
2nvb_A	352	Contribution Of Pro275 To The Thermostability Of Th		5e-23
4eez_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		1e-22
1llu_A	342	The Ternary Complex Of Pseudomonas Aeruginosa Alcoh		1e-22
2xaa_A	345	Alcohol Dehydrogenase Adh-'a' From Rhodococcus Rube		1e-22
1e3l_A	376	P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase		2e-22
1e3e_A	376	Mouse Class Ii Alcohol Dehydrogenase Complex With N		2e-22
4eex_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		2e-22
1hdz_A	374	Three-Dimensional Structures Of Three Human Alcohol		3e-22
3meq_A	365	Crystal Structure Of Alcohol Dehydrogenase From Bru		4e-22
1ped_A	351	Bacterial Secondary Alcohol Dehydrogenase (Apo-Form		5e-22
2b83_A	351	A Single Amino Acid Substitution In The Clostridium		7e-22
3fpc_A	352	Chimera Of Alcohol Dehydrogenase By Exchange Of The		1e-21
3fsr_A	352	Chimera Of Alcohol Dehydrogenase By Exchange Of The		2e-21
1jqb_A	351	Alcohol Dehydrogenase From Clostridium Beijerinckii		3e-21
1hdx_A	374	Three-Dimensional Structures Of Three Human Alcohol		3e-21
1hdy_A	374	Three-Dimensional Structures Of Three Human Alcohol		3e-21
1htb_A	374	Crystallization Of Human Beta3 Alcohol Dehydrogenas		3e-21
1hso_A	374	Human Alpha Alcohol Dehydrogenase (Adh1a) Length =		5e-21
3ftn_A	352	Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDRO		7e-21
1ht0_A	374	Human Gamma-2 Alcohol Dehydrogense Length = 374		9e-21
1h2b_A	359	Crystal Structure Of The Alcohol Dehydrogenase From		1e-20
3s1l_A	340	Crystal Structure Of Apo-Form Furx Length = 340		2e-20
1vj0_A	380	Crystal Structure Of Alcohol Dehydrogenase (Tm0436)		2e-20
1ee2_A	373	The Structure Of Steroid-Active Alcohol Dehydrogena		3e-20
1ee2_B	373	The Structure Of Steroid-Active Alcohol Dehydrogena		3e-20
1mgo_A	374	Horse Liver Alcohol Dehydrogenase Phe93ala Mutant L		6e-20
1axe_A	374	Crystal Structure Of The Active-Site Mutant Phe93->		9e-20
1qlh_A	374	Horse Liver Alcohol Dehydrogenase Complexed To Nad		9e-20
6adh_A	374	Structure Of Triclinic Ternary Complex Of Horse Liv		1e-19
3oq6_A	374	Horse Liver Alcohol Dehydrogenase A317c Mutant Comp		1e-19
1n8k_A	374	Horse Liver Alcohol Dehydrogenase Val292thr Mutant		1e-19
1ju9_A	374	Horse Liver Alcohol Dehydrogenase Val292ser Mutant		1e-19
1r37_A	347	Alcohol Dehydrogenase From Sulfolobus Solfataricus		1e-19
1a71_A	374	Ternary Complex Of An Active Site Double Mutant Of		2e-19
1qv6_A	374	Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG		3e-19
1nto_A	347	N249y Mutant Of Alcohol Dehydrogenase From The Arch		3e-19
1f8f_A	371	Crystal Structure Of Benzyl Alcohol Dehydrogenase F		3e-19
1axg_A	374	Crystal Structure Of The Val203->ala Mutant Of Live		3e-19
3cos_A	381	Crystal Structure Of Human Class Ii Alcohol Dehydro		5e-19
3i4c_A	347	Crystal Structure Of Sulfolobus Solfataricus Adh(Ss		5e-19
1jvb_A	347	Alcohol Dehydrogenase From The Archaeon Sulfolobus		1e-18
3ip1_A	404	Structure Of Putative Alcohol Dehydrogenase (Tm_042		2e-18
1y9a_A	360	Alcohol Dehydrogenase From Entamoeba Histolotica In		4e-18
1p0c_A	373	Crystal Structure Of The Nadp(H)-Dependent Vertebra		6e-18
2oui_A	360	D275p Mutant Of Alcohol Dehydrogenase From Protozoa		7e-18
3qj5_A	374	S-Nitrosoglutathione Reductase (Gsnor) In Complex W		3e-17
1teh_A	373	Structure Of Human Liver Chichi Alcohol Dehydrogena		3e-17
1mc5_A	374	Ternary Complex Of Human Glutathione-Dependent Form		3e-17
2fzw_A	373	Structure Of The Binary Complex Of The E67l Mutant		3e-16
1agn_A	373	X-Ray Structure Of Human Sigma Alcohol Dehydrogenas		7e-16
1d1t_A	373	Mutant Of Human Sigma Alcohol Dehydrogenase With Le		8e-16
3uko_A	378	Crystal Structure Of S-Nitrosoglutathione Reductase		2e-15
4dl9_A	396	Crystal Structure Of S-nitrosoglutathione Reductase		2e-15
1cdo_A	374	Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Co		2e-15
2dph_A	398	Crystal Structure Of Formaldehyde Dismutase Length		3e-15
1yqd_A	366	Sinapyl Alcohol Dehydrogenase Complexed With Nadp+		1e-14
1kol_A	398	Crystal Structure Of Formaldehyde Dehydrogenase Len		8e-13
1wly_A	333	Crystal Structure Of 2-haloacrylate Reductase Lengt		3e-11
2h6e_A	344	Crystal Structure Of The D-Arabinose Dehydrogenase		4e-11
3two_A	348	The Crystal Structure Of Cad From Helicobacter Pylo		7e-11
3jyl_A	325	Crystal Structures Of Pseudomonas Syringae Pv. Toma		8e-10
2hcy_A	347	Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevi		1e-09
3uog_A	363	Crystal Structure Of Putative Alcohol Dehydrogenase		2e-09
3qwa_A	334	Crystal Structure Of Saccharomyces Cerevisiae Zeta-		6e-09
1uuf_A	369	Crystal Structure Of A Zinc-Type Alcohol Dehydrogen		2e-08
1ps0_A	360	Crystal Structure Of The Nadp(H)-Dependent Cinnamyl		9e-08
3fbg_A	346	Crystal Structure Of A Putative Arginate Lyase From		1e-07
3goh_A	315	Crystal Structure Of Alcohol Dehydrogenase Superfam		1e-07
3krt_A	456	Crystal Structure Of Putative Crotonyl Coa Reductas		2e-06
4a27_A	349	Crystal Structure Of Human Synaptic Vesicle Membran		4e-06
2b5w_A	357	Crystal Structure Of D38c Glucose Dehydrogenase Mut		6e-06
1yb5_A	351	Crystal Structure Of Human Zeta-crystallin With Bou		3e-05
2b5v_A	357	Crystal Structure Of Glucose Dehydrogenase From Hal		1e-04
2cd9_A	366	Sulfolobus Solfataricus Glucose Dehydrogenase 1 - A		6e-04
1qor_A	327	Crystal Structure Of Escherichia Coli Quinone Oxido		6e-04
2cdb_A	366	Sulfolobus Solfataricus Glucose Dehydrogenase 1 In		7e-04

>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf Whitefly Length = 352

Iteration: 1
 Score =  285 bits (728), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 147/294 (50%), Positives = 197/294 (67%), Gaps = 1/294 (0%)
Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++A L   N L+++   +P     +VL++M  VGICGSDVHY +  R ADF+VK+PMVI
Sbjct: 5   NLSAVLYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVI 64
Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G + KVG  VK L  GDRVA+EPG+ C RC  CK G+YNLCP++ F ATPP  G+
Sbjct: 65  GHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGN 124
Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
           LA   VH AD C KLPDNVSLEEGA+ EPLSVG+HACRRA +   T VL++GAGPIGLV+
Sbjct: 125 LARYYVHAADFCHKLPDNVSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIGAGPIGLVS 184
Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257
           +L A+A+GA  +V       RL VAK  GAD  + V    ++ +  +E+I+ A+G   +V
Sbjct: 185 VLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNV 243
Query: 258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF 311
           + DC+G  K ++  ++ TR GG + LVGMG   +TVPL  A AR +    +F +
Sbjct: 244 TIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRY 297

>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo) Length = 356

Iteration: 1
 Score =  268 bits (685), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 140/295 (47%), Positives = 196/295 (66%), Gaps = 4/295 (1%)
Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL+RM +VGICGSDVHY +  R  +F+VK+PMV+
Sbjct: 8   NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVL 67
Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G +EKVGS VK L PGDRVA+EPG      + CK GRYNL P + F ATPP  G+
Sbjct: 68  GHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGN 127
Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
           L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ GAGPIG+VT
Sbjct: 128 LCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVT 187
Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGID 256
           +L A+A GA ++V+ D+   RLS AKE+GAD ++++S  + Q+IA +VE     +G   +
Sbjct: 188 LLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVE---GQLGCKPE 244
Query: 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF 311
           V+ +C G   ++   + ATR+GG + LVG+G    TVPL  AA R +    +F +
Sbjct: 245 VTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRY 299

>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase Length = 355

Iteration: 1
 Score =  266 bits (680), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 137/295 (46%), Positives = 198/295 (67%), Gaps = 4/295 (1%)
Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL++M +VGICGSDVHY +  R  DFVVK+PMV+
Sbjct: 7   NLSLVVHGPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKKPMVL 66
Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G + KVGS V+ L PGDRVA++PG      + CK GRYNL P + F ATPP  G+
Sbjct: 67  GHEASGTVVKVGSLVRHLQPGDRVAIQPGAPRQTDEFCKIGRYNLSPTIFFCATPPDDGN 126
Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
           L     H A+ C+KLPDNV+ EEGA+ EPLSVG+HACRRA +     VL+ GAGPIGLV 
Sbjct: 127 LCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIGLVN 186
Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGID 256
           +L A+A GA ++V+ D+   RLS AKE+GAD I+++S  + ++IA++VE +   +G+  +
Sbjct: 187 LLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILEISNESPEEIAKKVEGL---LGSKPE 243
Query: 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF 311
           V+ +C G   ++   + AT +GG + LVG+G    +VPL  AA R +    +F +
Sbjct: 244 VTIECTGVETSIQAGIYATHSGGTLVLVGLGSEMTSVPLVHAATREVDIKGVFRY 298

>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX Length = 356

Iteration: 1
 Score =  263 bits (671), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 138/295 (46%), Positives = 193/295 (65%), Gaps = 4/295 (1%)
Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL+R  +VGICGSDVHY +  R  +F+VK+P V+
Sbjct: 8   NLSLVVHGPGDLRLENYPIPEPGPNEVLLRXHSVGICGSDVHYWEYGRIGNFIVKKPXVL 67
Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G +EKVGS VK L PGDRVA+EPG      + CK GRYNL P + F ATPP  G+
Sbjct: 68  GHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKXGRYNLSPSIFFCATPPDDGN 127
Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
           L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ GAGPIG VT
Sbjct: 128 LCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGXVT 187
Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGID 256
           +L A+A GA ++V+ D+   RLS AKE+GAD ++++S  + Q+IA +VE     +G   +
Sbjct: 188 LLVAKAXGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVE---GQLGCKPE 244
Query: 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF 311
           V+ +C G   ++   + ATR+GG + LVG+G    TVPL  AA R +    +F +
Sbjct: 245 VTIECTGAEASIQAGIYATRSGGTLVLVGLGSEXTTVPLLHAAIREVDIKGVFRY 299

>pdb|3M6I|A Chain A, L-Arabinitol 4-Dehydrogenase Length = 363

Iteration: 1
 Score =  189 bits (479), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 112/271 (41%), Positives = 160/271 (59%), Gaps = 5/271 (1%)
Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVA 102
           +V V +++ GICGSDVH+ K       +V+   V+GHE AG +  V   VK++  GDRVA
Sbjct: 42  EVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVIAVHPSVKSIKVGDRVA 101
Query: 103 LEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA 162
           +EP + C  C+ C  GRYN C  + F +TPPV G L   V HPA  C K+  N+S E GA
Sbjct: 102 IEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKI-GNMSYENGA 160
Query: 163 MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA 222
           M EPLSV L   +RA +     VLI GAGPIGL+TML A+A GA  +VI D+D+ RL  A
Sbjct: 161 MLEPLSVALAGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFA 220
Query: 223 KELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID--VSFDCAGFNKTMSTALSATRAGGK 280
           KE+  + +      L    E  +KI ++ G GI+  V+ +C G   +++ A+ A + GGK
Sbjct: 221 KEICPEVVTHKVERL-SAEESAKKIVESFG-GIEPAVALECTGVESSIAAAIWAVKFGGK 278
Query: 281 VCLVGMGHLEMTVPLTPAAARYLIYSFLFHF 311
           V ++G+G  E+ +P   A+ R +   F + +
Sbjct: 279 VFVIGVGKNEIQIPFMRASVREVDLQFQYRY 309

>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase (Target Psi-012003) From Sinorhizobium Meliloti 1021 Length = 370

Iteration: 1
 Score =  148 bits (374), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 89/269 (33%), Positives = 141/269 (52%), Gaps = 11/269 (4%)
Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
           A  L  V  + ++   +P  GP D+LV+++A GICG+D H L      +F    P+ +GH
Sbjct: 26  AVRLESVGNISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLH----GEFPSTPPVTLGH 81
Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH--GS 137
           E  G++ + GS V+ + PG R+  +P ISC RC  C+ GR NLC  ++      +H  G 
Sbjct: 82  EFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIG---IHRDGG 138
Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
            A  V+ P    F++P  +    GA CEPL+  LH    + I   + V I+G G IGL+T
Sbjct: 139 FAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCLHGVDLSGIKAGSTVAILGGGVIGLLT 198
Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257
           +  AR  GA  +++      +  +A+E+GA   V  S    D+ E +      +  G+DV
Sbjct: 199 VQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAG--DVVEAIAGPVGLVPGGVDV 256
Query: 258 SFDCAGFNKTMSTALSATRAGGKVCLVGM 286
             +CAG  +T+  +    +AGG V ++G+
Sbjct: 257 VIECAGVAETVKQSTRLAKAGGTVVILGV 285

>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus Horikoshii Length = 347

Iteration: 1
 Score =  138 bits (347), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 141/259 (54%), Gaps = 6/259 (2%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           ++P  GP +VL+++ A  ICG+D+H  +    A   +K P + GHE AG + ++G  V+ 
Sbjct: 22  DVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEG 81
Query: 95  LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 154
           +  GD V++E  I C +C  C+ G+Y++C   K F      G  A   V PA   +K P 
Sbjct: 82  IEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGVFAEYAVVPAQNIWKNPK 140
Query: 155 NVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV 214
           ++  E   + EPL   +       I  ++ VLI GAGP+GL+ +  A+A GA  +++ + 
Sbjct: 141 SIPPEYATLQEPLGNAVDTVLAGPISGKS-VLITGAGPLGLLGIAVAKASGAYPVIVSEP 199
Query: 215 DDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSA 274
            D+R  +AK++GAD +  ++   +D+ +EV  I    G G+DV  + +G  K +   L A
Sbjct: 200 SDFRRELAKKVGADYV--INPFEEDVVKEVXDITD--GNGVDVFLEFSGAPKALEQGLQA 255
Query: 275 TRAGGKVCLVGMGHLEMTV 293
               G+V L+G+   ++T+
Sbjct: 256 VTPAGRVSLLGLYPGKVTI 274

>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3 Length = 348

Iteration: 1
 Score =  138 bits (347), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 141/259 (54%), Gaps = 6/259 (2%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           ++P  GP +VL+++ A  ICG+D+H  +    A   +K P + GHE AG + ++G  V+ 
Sbjct: 23  DVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEG 82
Query: 95  LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 154
           +  GD V++E  I C +C  C+ G+Y++C   K F      G  A   V PA   +K P 
Sbjct: 83  IEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGVFAEYAVVPAQNIWKNPK 141
Query: 155 NVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV 214
           ++  E   + EPL   +       I  ++ VLI GAGP+GL+ +  A+A GA  +++ + 
Sbjct: 142 SIPPEYATLQEPLGNAVDTVLAGPISGKS-VLITGAGPLGLLGIAVAKASGAYPVIVSEP 200
Query: 215 DDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSA 274
            D+R  +AK++GAD +  ++   +D+ +EV  I    G G+DV  + +G  K +   L A
Sbjct: 201 SDFRRELAKKVGADYV--INPFEEDVVKEVXDITD--GNGVDVFLEFSGAPKALEQGLQA 256
Query: 275 TRAGGKVCLVGMGHLEMTV 293
               G+V L+G+   ++T+
Sbjct: 257 VTPAGRVSLLGLYPGKVTI 275

>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The Hyperthermophilic Archaeon Thermococcus Kodakaraensis Length = 350

Iteration: 1
 Score =  136 bits (342), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 141/259 (54%), Gaps = 6/259 (2%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           ++P  GP +VL+++ A  ICG+D+H  +    A   +K P ++GHE AG + +VG  V+ 
Sbjct: 23  DVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEVGPGVED 82
Query: 95  LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 154
           L  GD +++E  I C +C  CK  RY++C   K F    + G  A+  + PA   +K P 
Sbjct: 83  LQVGDYISVETHIVCGKCYACKHNRYHVCQNTKIFGV-DMDGVFAHYAIVPAKNAWKNPK 141
Query: 155 NVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV 214
           ++  E  A+ EPL   +       I   +  LI GAGP+GL+ +  A+A GA  +++ + 
Sbjct: 142 DMPPEYAALQEPLGNAVDTVLAGPIAGRST-LITGAGPLGLLGIAVAKASGAYPVIVSEP 200
Query: 215 DDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSA 274
            ++R  +AK++GAD +  V+   +D  + V  I    G G++V  + +G  K +   L A
Sbjct: 201 SEFRRKLAKKVGADYV--VNPFEEDPVKFVMDITD--GAGVEVFLEFSGAPKALEQGLKA 256
Query: 275 TRAGGKVCLVGMGHLEMTV 293
              GG+V L+G+   E+T+
Sbjct: 257 VTPGGRVSLLGLFPREVTI 275

>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Length = 343

Iteration: 1
 Score =  131 bits (329), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 134/251 (53%), Gaps = 7/251 (2%)
Query: 36  LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95
           +P  GP ++LVR++A  ICG+D+H  K    A   ++ P+V GHE +GV+E VG  V+  
Sbjct: 20  VPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRP 79
Query: 96  VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 155
             GD V+LE  I C  C  C+ G Y++C   +        G  A  VV PA+  +  P +
Sbjct: 80  QVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGV-DRDGGFAEYVVVPAENAWVNPKD 138
Query: 156 VSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD 215
           +  E  A+ EP    +H     +     +VLI GAGPIGL+  +  RA GA  I++ D +
Sbjct: 139 LPFEVAAILEPFGNAVHTVYAGSGVSGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPN 198
Query: 216 DYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSAT 275
            YRL+ A+   AD +V     L++  + +E +++  G+G++V  + +G    +   L A 
Sbjct: 199 PYRLAFARPY-ADRLVN---PLEE--DLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMAL 252
Query: 276 RAGGKVCLVGM 286
             GG+  ++G+
Sbjct: 253 IPGGEARILGI 263

>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339

Iteration: 1
 Score =  122 bits (306), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 137/273 (50%), Gaps = 20/273 (7%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE--PMVIGHECAGVIE 86
           LKI+  E P++   +VLVR+KA G+C +D+H        D+ VK   P++ GHE  G++E
Sbjct: 13  LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAH----GDWPVKPKLPLIPGHEGVGIVE 68
Query: 87  KVGSEVKTLVPGDRVALEPGI--SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           +VG  V  L  GDRV + P +  +C  CD+C  G+  LC   K  A   V G  A     
Sbjct: 69  EVGPGVTHLKVGDRVGI-PWLYSACGHCDYCLSGQETLCEHQK-NAGYSVDGGYAEYCRA 126
Query: 145 PADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAR 202
            AD   K+PDN+S EE A   C  ++    A +     P   V I G G +G V +  A+
Sbjct: 127 AADYVVKIPDNLSFEEAAPIFCAGVTT-YKALKVTGAKPGEWVAIYGIGGLGHVAVQYAK 185
Query: 203 AFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 262
           A G   +V VD+ D +L +AKELGAD +V        + E+  K  K    G+  +   A
Sbjct: 186 AMGL-NVVAVDIGDEKLELAKELGADLVV------NPLKEDAAKFMKEKVGGVHAAVVTA 238
Query: 263 GFNKTMSTALSATRAGGKVCLVGMGHLEMTVPL 295
                  +A ++ R GG   LVG+   EM +P+
Sbjct: 239 VSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPI 271

>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339

Iteration: 1
 Score =  122 bits (305), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 136/273 (49%), Gaps = 20/273 (7%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE--PMVIGHECAGVIE 86
           LKI+  E P++   +VLVR+KA G+C +D+H        D+ VK   P++ GHE  G++E
Sbjct: 13  LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAH----GDWPVKPKLPLIPGHEGVGIVE 68
Query: 87  KVGSEVKTLVPGDRVALEPGI--SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           +VG  V  L  GDRV + P +  +C  CD+C  G+  LC   K  A   V G  A     
Sbjct: 69  EVGPGVTHLKVGDRVGI-PWLYSACGHCDYCLSGQETLCEHQK-NAGYSVDGGYAEYCRA 126
Query: 145 PADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAR 202
            AD   K+PDN+S EE A   C  ++    A +     P   V I G G  G V +  A+
Sbjct: 127 AADYVVKIPDNLSFEEAAPIFCAGVTT-YKALKVTGAKPGEWVAIYGIGGFGHVAVQYAK 185
Query: 203 AFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 262
           A G   +V VD+ D +L +AKELGAD +V        + E+  K  K    G+  +   A
Sbjct: 186 AMGL-NVVAVDIGDEKLELAKELGADLVV------NPLKEDAAKFMKEKVGGVHAAVVTA 238
Query: 263 GFNKTMSTALSATRAGGKVCLVGMGHLEMTVPL 295
                  +A ++ R GG   LVG+   EM +P+
Sbjct: 239 VSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPI 271

>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase From Escherichia Coli Length = 346

Iteration: 1
 Score =  118 bits (295), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 125/261 (47%), Gaps = 33/261 (12%)
Query: 43  DVLVRMKAVGICGSDV--------HYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           +V V++ + G+CGSD+        HY             P+ +GHE +G I+ VGS V  
Sbjct: 27  EVRVKIASSGLCGSDLPRIFKNGAHYY------------PITLGHEFSGYIDAVGSGVDD 74
Query: 95  LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 154
           L PGD VA  P + C+ C  C  G Y+ C +  F  +    G  A  +V      F LP 
Sbjct: 75  LHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRR-DGGFAEYIVVKRKNVFALPT 133
Query: 155 NVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV 214
           ++ +E+GA  EP++VGLHA   A      NV+I+GAG IGL+ +  A A GA  +  +D+
Sbjct: 134 DMPIEDGAFIEPITVGLHAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDI 193
Query: 215 DDYRLSVAKELGADNIVKVST----NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMST 270
              +L++AK  GA      S      +Q +  E+   Q  + T        AG  +T+  
Sbjct: 194 SSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILET--------AGVPQTVEL 245
Query: 271 ALSATRAGGKVCLVGMGHLEM 291
           A+       ++ LVG  H ++
Sbjct: 246 AVEIAGPHAQLALVGTLHQDL 266

>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase (rspb) From E. Coli Cft073 (efi Target Efi-506413) Complexed With Cofactor Nadh Length = 359

Iteration: 1
 Score =  111 bits (278), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 72/205 (35%), Positives = 104/205 (50%), Gaps = 9/205 (4%)
Query: 27  NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE 86
           N L I   E+P+    +V V++K  GICGSD H     R  +   K P VIGHE  GVI+
Sbjct: 30  NQLSIIEREIPTPSAGEVRVKVKLAGICGSDSH---IYRGHNPFAKYPRVIGHEFFGVID 86
Query: 87  KVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH--GSLANQVVH 144
            VG  V++   G+RVA++P +SC  C  C  G+ N+C  +       VH  G  +   V 
Sbjct: 87  AVGEGVESARVGERVAVDPVVSCGHCYPCSIGKPNVCTTLAVLG---VHADGGFSEYAVV 143
Query: 145 PADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGL-VTMLGARA 203
           PA   +K+P+ V+ +   M EP ++  +            VL+ GAGPIGL +  +    
Sbjct: 144 PAKNAWKIPEAVADQYAVMIEPFTIAANVTGHGQPTENDTVLVYGAGPIGLTIVQVLKGV 203
Query: 204 FGAPRIVIVDVDDYRLSVAKELGAD 228
           +    +++ D  D RL  AKE GAD
Sbjct: 204 YNVKNVIVADRIDERLEKAKESGAD 228

>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343

Iteration: 1
 Score =  108 bits (270), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 142/302 (47%), Gaps = 27/302 (8%)
Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
           G   L++    +P  GP +V VR+KA  +   DV   K +      +  P V+G + +GV
Sbjct: 11  GPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPL--PHVLGADGSGV 68
Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           ++ VG  V+   PGD V + PG+SC RC+ C  G  NLCP  +       HG+ A  VV 
Sbjct: 69  VDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGE-HRHGTYAEYVVL 127
Query: 145 PADLCFKLPDNVSLEEGAMCEPLSVGLHACR----RANIGPETNVLIMGAGP-IGLVTML 199
           P       P N+S EE A   PL+  L A +    +  + P  +VL+M AG  + +  + 
Sbjct: 128 PEANLAPKPKNLSFEEAAAI-PLTF-LTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQ 185
Query: 200 GARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259
            A+ FGA R++     + +L  AK LGAD  V  +    D  +EV ++    G G D   
Sbjct: 186 IAKLFGA-RVIATAGSEDKLRRAKALGADETVNYTH--PDWPKEVRRLTG--GKGADKVV 240
Query: 260 DCAGFNKTMSTALSATRAGGKVCLVGMGH-LEMTVPLTPAAARYLIYSFLFHFFLIVLGY 318
           D  G        + AT  GG++ + G     E T+P          ++ +F+  L +LG 
Sbjct: 241 DHTG-ALYFEGVIKATANGGRIAIAGASSGYEGTLP----------FAHVFYRQLSILGS 289
Query: 319 SV 320
           ++
Sbjct: 290 TM 291

>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347

Iteration: 1
 Score =  107 bits (267), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 132/276 (47%), Gaps = 14/276 (5%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK----TLRCA-DFVVKEPMVIGHECAG 83
           LK++   +P      VL++++A G+C SDVH  +     LR   D  VK P+ +GHE AG
Sbjct: 13  LKLEDIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
            IE+VG EV     GD VA+ P      C +C+ G  +LC   ++       G+ A  V+
Sbjct: 73  RIEEVGDEVVGYSKGDLVAVNPWEGEGNCYYCRIGEEHLCDSPRWLGI-NYDGAYAEYVL 131
Query: 144 HP-ADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGA-GPIGLVTMLGA 201
            P     +KL    ++E   +         A R+A++ P   ++++GA G +G + +  A
Sbjct: 132 VPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVRKASLDPSKTLVVIGAGGGLGTMAIQIA 191
Query: 202 RAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 261
           +A     I+ VDV +  L  AK  GAD ++  S+  QD   E+ +I +  G G D   D 
Sbjct: 192 KAVSGATIIGVDVREEALEAAKRAGADYVINASS--QDPVSEIRRITQ--GKGADAVIDL 247
Query: 262 AGFNKTMSTALSATRAGGKVCLVGM--GHLEMTVPL 295
               KT+S         GK  +VG+    L+   PL
Sbjct: 248 NNSEKTLSIYPYVLAKQGKYVMVGLFGADLKYHAPL 283

>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of C. Beijerinckii Adh By T. Brockii Adh Length = 351

Iteration: 1
 Score =  106 bits (265), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/269 (31%), Positives = 126/269 (46%), Gaps = 16/269 (5%)
Query: 23  LLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECA 82
           +LG+N L     E P  G YD +VR  AV  C SD+H +      D   ++ M++GHE  
Sbjct: 6   MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGD---RKNMILGHEAV 62
Query: 83  GVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFA-TPPVHGS 137
           G + +VGSEVK   PGDRV +      WR    + G       M    KF      V G 
Sbjct: 63  GEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGE 122
Query: 138 LANQVVHPADLCFK-LPDNVSLEEGAM-CEPLSVGLHACRRANIGPETNVLIMGAGPIGL 195
             +  V+ AD+    LP ++ LE   M  + ++ G H    A+I     V ++G GP+GL
Sbjct: 123 YFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIELGATVAVLGIGPVGL 180
Query: 196 VTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 255
           + + GA+  GA RI+ V      +  AK  GA +IV    N +D   E + +    G G+
Sbjct: 181 MAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIV----NYKDGPIESQIMNLTEGKGV 236
Query: 256 DVSFDCAGFNKTMSTALSATRAGGKVCLV 284
           D +    G    M+TA+   + GG +  V
Sbjct: 237 DAAIIAGGNADIMATAVKIVKPGGTIANV 265

>pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium Brockii Length = 352

Iteration: 1
 Score =  104 bits (260), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 121/257 (47%), Gaps = 16/257 (6%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           E P+ GP+D +VR  AV  C SD+H   T+       +  M++GHE  G + +VGSEVK 
Sbjct: 18  EKPAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKD 74
Query: 95  LVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPP-VHGSLANQVVHPADLC 149
             PGDRV +      WR    + G +     M    KF      V G   +  V+ AD+ 
Sbjct: 75  FKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFH--VNDADMN 132
Query: 150 F-KLPDNVSLEEGAMC-EPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAP 207
              LP  + LE   M  + ++ G H    A+I     V ++G GP+GL+ + GA+  GA 
Sbjct: 133 LAHLPKEIPLEAAVMIPDMMTTGFHGAELADIELGATVAVLGIGPVGLMAVAGAKLRGAG 192
Query: 208 RIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKT 267
           RI+ V      +  AK  GA +IV    N +D   E + +    G G+D +    G    
Sbjct: 193 RIIAVGSRPVCVDAAKYYGATDIV----NYKDGPIESQIMNLTEGKGVDAAIIAGGNADI 248
Query: 268 MSTALSATRAGGKVCLV 284
           M+TA+   + GG +  V
Sbjct: 249 MATAVKIVKPGGTIANV 265

>pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The Alcohol Dehydrogenases (Adhs) Length = 352

Iteration: 1
 Score =  104 bits (260), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 121/257 (47%), Gaps = 16/257 (6%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           E P+ GP+D +VR  AV  C SD+H   T+       +  M++GHE  G + +VGSEVK 
Sbjct: 18  EKPAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKD 74
Query: 95  LVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPP-VHGSLANQVVHPADLC 149
             PGDRV +      WR    + G +     M    KF      V G   +  V+ AD+ 
Sbjct: 75  FKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFH--VNDADMN 132
Query: 150 F-KLPDNVSLEEGAMC-EPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAP 207
              LP  + LE   M  + ++ G H    A+I     V ++G GP+GL+ + GA+  GA 
Sbjct: 133 LAHLPKEIPLEAAVMIPDMMTTGFHGAELADIELGATVAVLGIGPVGLMAVAGAKLRGAG 192
Query: 208 RIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKT 267
           RI+ V      +  AK  GA +IV    N +D   E + +    G G+D +    G    
Sbjct: 193 RIIAVGSRPVCVDAAKYYGATDIV----NYKDGPIESQIMNLTEGKGVDAAIIAGGNADI 248
Query: 268 MSTALSATRAGGKVCLV 284
           M+TA+   + GG +  V
Sbjct: 249 MATAVKIVKPGGTIANV 265

>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Variant Re1 Length = 348

Iteration: 1
 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 139/265 (52%), Gaps = 15/265 (5%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           EL ++ P + L+ M+  G+C +D+H    +   DF  K   V+GHE  G+++++G++V +
Sbjct: 20  ELRAIKPNEALLDMEYCGVCHTDLH----VAAGDFGNKAGTVLGHEGIGIVKEIGADVSS 75
Query: 95  LVPGDRVALEPGIS-CWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLP 153
           L  GDRV++      C  C++C  G    C E+K  A   V G +A + +  AD   K+P
Sbjct: 76  LQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVK-NAGYSVDGGMAEEAIVVADYAVKVP 134
Query: 154 DNVSLEEGAMCEPLSVGLH-ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIV 212
           D +   E +      V  + A + + + P    +I GAG +G + +  A+     +++ V
Sbjct: 135 DGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAV 194
Query: 213 DVDDYRLSVAKELGADNIVKVSTNLQDI--AEEVEKIQKAMGTGIDVSFDCAGFNKTMST 270
           D++  +L++AK++GAD    V+ N  D+   +E++KI    G G+  +  CA        
Sbjct: 195 DINQDKLNLAKKIGAD----VTINSGDVNPVDEIKKITG--GLGVQSAIVCAVARIAFEQ 248
Query: 271 ALSATRAGGKVCLVGMGHLEMTVPL 295
           A+++ +  GK+  V + + EMT+ +
Sbjct: 249 AVASLKPMGKMVAVAVPNTEMTLSV 273

>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342

Iteration: 1
 Score =  103 bits (257), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/273 (31%), Positives = 133/273 (48%), Gaps = 20/273 (7%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPM--VIGHECAGVIE 86
           L+I+  ++P  GP  VLV+++A G+C +D+H  +     D+ VK P+  + GHE  G + 
Sbjct: 19  LRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAE----GDWPVKPPLPFIPGHEGVGYVA 74
Query: 87  KVGSEVKTLVPGDRVALEPGI--SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
            VGS V  +  GDRV + P +  +C  C+HC  G   LC E +      V+G  A  V+ 
Sbjct: 75  AVGSGVTRVKEGDRVGI-PWLYTACGCCEHCLTGWETLC-ESQQNTGYSVNGGYAEYVLA 132
Query: 145 PADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAR 202
             +    LP NV   E A  +C  ++V     ++ N  P   V I G G +G V +  AR
Sbjct: 133 DPNYVGILPKNVEFAEIAPILCAGVTV-YKGLKQTNARPGQWVAISGIGGLGHVAVQYAR 191
Query: 203 AFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 262
           A G   +  +D+DD +L +A++LGA   V          + VE IQ+ +G G       A
Sbjct: 192 AMGL-HVAAIDIDDAKLELARKLGASLTVNARQE-----DPVEAIQRDIG-GAHGVLVTA 244
Query: 263 GFNKTMSTALSATRAGGKVCLVGMGHLEMTVPL 295
             N     A+   R GG + LVG+   +   P+
Sbjct: 245 VSNSAFGQAIGMARRGGTIALVGLPPGDFPTPI 277

>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm 44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol Length = 345

Iteration: 1
 Score =  103 bits (257), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 118/257 (45%), Gaps = 13/257 (5%)
Query: 37  PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96
           P+ GP ++L+++ A G+C SD+ ++  +  A +    P+ +GHE  G + ++G  V    
Sbjct: 21  PTPGPGEILLKVTAAGLCHSDI-FVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFG 79
Query: 97  PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA-TPPVHGSLANQ----VVHPADLCFK 151
            GD VA+     C  C  C  GR N C        TPP  GS  +     +V  A     
Sbjct: 80  VGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVP 139
Query: 152 LPDNVSLEEGAMCEPLSVGLHACRRAN--IGPETNVLIMGAGPIGLVTMLGARAFGAPRI 209
           + D   +    + +      HA  R    +GP +  +++G G +G V +   RA  A R+
Sbjct: 140 IGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARV 199
Query: 210 VIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMS 269
           + VD+DD RL++A+E+GAD  VK      D   E+       G G    FD  G   T+ 
Sbjct: 200 IAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTG-----GQGATAVFDFVGAQSTID 254
Query: 270 TALSATRAGGKVCLVGM 286
           TA       G + +VG+
Sbjct: 255 TAQQVVAVDGHISVVGI 271

>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 138/303 (45%), Gaps = 39/303 (12%)
Query: 21  AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
           AW  G + L I+  E+      +V +++ A  +C +D++     + A F    P+V+GHE
Sbjct: 14  AWKTG-SPLCIEEIEVSPPKACEVRIQVIATCVCHTDINATDPKKKALF----PVVLGHE 68
Query: 81  CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN 140
           CAG++E VG  V    PGD+V       C RC  C     NLC +++ F  P +   L  
Sbjct: 69  CAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELME 128
Query: 141 Q-------------------------VVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHA 173
                                     VV  A+L  ++ D  +LE   +  C   S    A
Sbjct: 129 DRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLA-RVDDEANLERVCLIGCGFSSGYGAA 187
Query: 174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV 233
              A + P +   + G G +GL  ++G +  GA RI+ +D++  +   AK LGA + +  
Sbjct: 188 INTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCL-- 245
Query: 234 STNLQDIAEEVEK-IQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHLEM 291
             N +++ + V+  I +    G+D S DCAG  +T+  A+  T  G G   +VG    EM
Sbjct: 246 --NPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEM 303
Query: 292 TVP 294
           T+P
Sbjct: 304 TIP 306

>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 138/303 (45%), Gaps = 39/303 (12%)
Query: 21  AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
           AW  G + L I+  E+      +V +++ A  +C +D++     + A F    P+V+GHE
Sbjct: 14  AWKTG-SPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKALF----PVVLGHE 68
Query: 81  CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN 140
           CAG++E VG  V    PGD+V       C RC  C     NLC +++ F  P +   L  
Sbjct: 69  CAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELME 128
Query: 141 Q-------------------------VVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHA 173
                                     VV  A+L  ++ D  +LE   +  C   S    A
Sbjct: 129 DRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLA-RVDDEANLERVCLIGCGFSSGYGAA 187
Query: 174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV 233
              A + P +   + G G +GL  ++G +  GA RI+ +D++  +   AK LGA + +  
Sbjct: 188 INTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCL-- 245
Query: 234 STNLQDIAEEVEK-IQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHLEM 291
             N +++ + V+  I +    G+D S DCAG  +T+  A+  T  G G   +VG    EM
Sbjct: 246 --NPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEM 303
Query: 292 TVP 294
           T+P
Sbjct: 304 TIP 306

>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Length = 348

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 139/265 (52%), Gaps = 15/265 (5%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           EL ++ P + L+ M+  G+C +D+H    +   D+  K   V+GHE  G+++++G++V +
Sbjct: 20  ELRAIKPNEALLDMEYCGVCHTDLH----VAAGDYGNKAGTVLGHEGIGIVKEIGADVSS 75
Query: 95  LVPGDRVALEPGIS-CWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLP 153
           L  GDRV++      C  C++C  G    C E+K  A   V G +A + +  AD   K+P
Sbjct: 76  LQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKN-AGYSVDGGMAEEAIVVADYAVKVP 134
Query: 154 DNVSLEEGAMCEPLSVGLH-ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIV 212
           D +   E +      V  + A + + + P    +I GAG +G + +  A+     +++ V
Sbjct: 135 DGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAV 194
Query: 213 DVDDYRLSVAKELGADNIVKVSTNLQDI--AEEVEKIQKAMGTGIDVSFDCAGFNKTMST 270
           D++  +L++AK++GAD I+    N  D+   +E++KI    G G+  +  CA        
Sbjct: 195 DINQDKLNLAKKIGADVII----NSGDVNPVDEIKKITG--GLGVQSAIVCAVARIAFEQ 248
Query: 271 ALSATRAGGKVCLVGMGHLEMTVPL 295
           A+++ +  GK+  V + + EMT+ +
Sbjct: 249 AVASLKPMGKMVAVALPNTEMTLSV 273

>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 133/297 (44%), Gaps = 40/297 (13%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     Y+V ++M AVGICG+D H +      + V   P+++GHE AG++E V
Sbjct: 21  FSIEDVEVAPPKAYEVRIKMVAVGICGTDDHVVS----GNLVTPLPVILGHEAAGIVESV 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-------------MKFFAT--PP 133
           G  V T+ PGD+V       C +C  CK    N C +              + F     P
Sbjct: 77  GEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKP 136
Query: 134 VHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGPE 182
           +H  L           + + D  ++ +     PL          S G   A   A + P 
Sbjct: 137 IHHFLGTSTFSQ----YTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPG 192
Query: 183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAE 242
           +   + G G +GL  ++G +A GA RI+ VD++  + + AKELGA   +    N QD  +
Sbjct: 193 STCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECI----NPQDYKK 248
Query: 243 EVEKIQKAMGT-GIDVSFDCAG-FNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTP 297
            ++++ K M   G+D SF+  G  +  M++ L    A G   +VG+      + + P
Sbjct: 249 PIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINP 305

>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365

Iteration: 1
 Score =  101 bits (252), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 123/264 (46%), Gaps = 18/264 (6%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE--PMVIGHECAGVIE 86
           L I    +P  GP  + V ++A G+C +D+H  +     D+ VK   P + GHE  G + 
Sbjct: 38  LTIDEVPIPQPGPGQIQVAIQASGVCHTDLHAAE----GDWPVKPNPPFIPGHEGVGFVS 93
Query: 87  KVGSEVKTLVPGDRVALEPGI--SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
            VGS VK +  GDRV + P +  +C  C HC GG   LC E +      V+G  A  VV 
Sbjct: 94  AVGSGVKHVKEGDRVGI-PWLYTACGHCRHCLGGWETLCEE-QLNTGYSVNGGFAEYVVA 151
Query: 145 PADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAR 202
             +    LP N+   E A  +C  ++V     +  +  P   V+I G G +G + +  AR
Sbjct: 152 DPNFVGHLPKNIDFNEIAPVLCAGVTV-YKGLKVTDTKPGDWVVISGIGGLGHMAVQYAR 210
Query: 203 AFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 262
           A G   +  VD+DD +L +A+ LGA     V+ N + +A+    I+K    G       A
Sbjct: 211 AMGL-NVAAVDIDDRKLDLARRLGA----TVTVNAKTVADPAAYIRKETDGGAQGVLVTA 265
Query: 263 GFNKTMSTALSATRAGGKVCLVGM 286
              K    AL     GG V L G+
Sbjct: 266 VSPKAFEQALGMVARGGTVSLNGL 289

>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form) Length = 351

Iteration: 1
 Score =  101 bits (252), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 128/264 (48%), Gaps = 16/264 (6%)
Query: 23  LLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECA 82
           +LG+N L     E P  G YD +VR  AV  C SD+H +      D   ++ M++GHE  
Sbjct: 6   MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGD---RKNMILGHEAV 62
Query: 83  GVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFA-TPPVHGS 137
           G + +VGSEVK   PGDRV +      WR    + G       M    KF      V G 
Sbjct: 63  GEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGE 122
Query: 138 LANQVVHPADLCFK-LPDNVSLEEGAM-CEPLSVGLHACRRANIGPETNVLIMGAGPIGL 195
             +  V+ AD+    LP ++ LE   M  + ++ G H    A+I   ++V+++G G +GL
Sbjct: 123 YFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQMGSSVVVIGIGAVGL 180
Query: 196 VTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 255
           + + GA+  GA RI+ V      +  AK  GA +I+        I ++V K+    G G+
Sbjct: 181 MGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQVMKLTN--GKGV 236
Query: 256 DVSFDCAGFNKTMSTALSATRAGG 279
           D      G ++T+S A+S  + GG
Sbjct: 237 DRVIMAGGGSETLSQAVSMVKPGG 260

>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium Beijerinckii Alcohol Dehydrogenase Is Critical For Thermostabilization Length = 351

Iteration: 1
 Score =  101 bits (251), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 128/264 (48%), Gaps = 16/264 (6%)
Query: 23  LLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECA 82
           +LG+N L     E P  G YD +VR  AV  C SD+H +      D   ++ M++GHE  
Sbjct: 6   MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGD---RKNMILGHEAV 62
Query: 83  GVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGG----RYNLCPEMKFFA-TPPVHGS 137
           G + +VGSEVK   PGDRV +      WR    + G       +    KF      V G 
Sbjct: 63  GEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFPQHSNGMLAGWKFSNFKDGVFGE 122
Query: 138 LANQVVHPADLCFK-LPDNVSLEEGAM-CEPLSVGLHACRRANIGPETNVLIMGAGPIGL 195
             +  V+ AD+    LP ++ LE   M  + ++ G H    A+I   ++V+++G G +GL
Sbjct: 123 YFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQMGSSVVVIGIGAVGL 180
Query: 196 VTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 255
           + + GA+  GA RI+ V      +  AK  GA +I+        I ++V K+    G G+
Sbjct: 181 MGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQVMKLTN--GKGV 236
Query: 256 DVSFDCAGFNKTMSTALSATRAGG 279
           D      G ++T+S A+S  + GG
Sbjct: 237 DRVIMAGGGSETLSQAVSMVKPGG 260

>pdb|3FPC|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By E. Histolytica Adh Length = 352

Iteration: 1
 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/263 (31%), Positives = 122/263 (46%), Gaps = 19/263 (7%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           E P+ GP+D +VR  AV  C SD+H   T+       +  M++GHE  G + +VGSEVK 
Sbjct: 18  EKPAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKD 74
Query: 95  LVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPP-VHGSLANQVVHPADLC 149
             PGDRV +      WR    + G +     M    KF      V G   +  V+ AD+ 
Sbjct: 75  FKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFH--VNDADMN 132
Query: 150 F-KLPDNVSLEEGAMC-EPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAP 207
              LP  + LE   M  + ++ G H    ANI     V ++G GP+GL+++ GA   GA 
Sbjct: 133 LAHLPKEIPLEAAVMIPDMMTTGFHGAELANIKLGDTVCVIGIGPVGLMSVAGANHLGAG 192
Query: 208 RIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKT 267
           RI  V    +   +A E GA +I+       DI E++  ++   G G+D      G   T
Sbjct: 193 RIFAVGSRKHCCDIALEYGATDIINYKNG--DIVEQI--LKATDGKGVDKVVIAGGDVHT 248
Query: 268 MSTALSATRAG---GKVCLVGMG 287
            + A+   + G   G V  +G G
Sbjct: 249 FAQAVKMIKPGSDIGNVNYLGEG 271

>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352

Iteration: 1
 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 123/252 (48%), Gaps = 16/252 (6%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           E P+ GP+D +VR  AV  C SD+H   T+       +  M++GHE  G + +VGSEVK 
Sbjct: 18  EKPAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKD 74
Query: 95  LVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPP-VHGSLANQVVHPADLC 149
             PGDRV +      WR    + G +     M    KF      V G   +  V+ AD+ 
Sbjct: 75  FKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFH--VNDADMN 132
Query: 150 F-KLPDNVSLEEGAMC-EPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAP 207
              LP  + LE   M  + ++ G H    A+I   ++V+++G G +GL+ + GA+  GA 
Sbjct: 133 LAHLPKEIPLEAAVMIPDMMTTGFHGAELADIQMGSSVVVIGIGAVGLMGIAGAKLRGAG 192
Query: 208 RIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKT 267
           RI+ V      +  AK  GA +I+        I ++V K+    G G+D      G ++T
Sbjct: 193 RIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQVMKLTN--GKGVDRVIMAGGGSET 248
Query: 268 MSTALSATRAGG 279
           +S A+S  + GG
Sbjct: 249 LSQAVSMVKPGG 260

>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii: Crystal Structure Of Mutant With Enhanced Thermal Stability Length = 351

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 127/264 (48%), Gaps = 16/264 (6%)
Query: 23  LLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECA 82
           +LG+N L     E P  G YD +VR  AV  C SD+H +      D   ++ M++GHE  
Sbjct: 6   MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGD---RKNMILGHEAV 62
Query: 83  GVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFA-TPPVHGS 137
           G + +VGSEVK   PGDRV +      WR    + G       M    KF      V G 
Sbjct: 63  GEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGE 122
Query: 138 LANQVVHPADLCFK-LPDNVSLEEGAM-CEPLSVGLHACRRANIGPETNVLIMGAGPIGL 195
             +  V+ AD+    LP ++ LE   M  + ++ G H    A+I   ++V+++G G +GL
Sbjct: 123 YFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIEMGSSVVVIGIGAVGL 180
Query: 196 VTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 255
           + + GA+  GA RI+ V      +  AK  GA +I+        I ++V K+    G G+
Sbjct: 181 MGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIEDQVMKLTN--GKGV 236
Query: 256 DVSFDCAGFNKTMSTALSATRAGG 279
           D      G ++T+S A+   + GG
Sbjct: 237 DRVIMAGGGSETLSQAVKMVKPGG 260

>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 132/297 (44%), Gaps = 40/297 (13%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     Y+V ++M AVGIC +D H +      + V   P+++GHE AG++E V
Sbjct: 21  FSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVS----GNLVTPLPVILGHEAAGIVESV 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-------------MKFFAT--PP 133
           G  V T+ PGD+V       C +C  CK    N C +              + F     P
Sbjct: 77  GEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKP 136
Query: 134 VHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGPE 182
           +H  L           + + D  ++ +     PL          S G   A   A + P 
Sbjct: 137 IHHFLGTSTFSQ----YTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPG 192
Query: 183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAE 242
           +   + G G +GL  ++G +A GA RI+ VD++  + + AKELGA   +    N QD  +
Sbjct: 193 STCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECI----NPQDYKK 248
Query: 243 EVEKIQKAMGT-GIDVSFDCAG-FNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTP 297
            ++++ K M   G+D SF+  G  +  M++ L    A G   +VG+      + + P
Sbjct: 249 PIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINP 305

>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 132/297 (44%), Gaps = 40/297 (13%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     Y+V ++M AVGIC +D H +      + V   P+++GHE AG++E V
Sbjct: 21  FSIEDVEVAPPKAYEVRIKMVAVGICHTDDHVVS----GNLVTPLPVILGHEAAGIVESV 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-------------MKFFAT--PP 133
           G  V T+ PGD+V       C +C  CK    N C +              + F     P
Sbjct: 77  GEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKP 136
Query: 134 VHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGPE 182
           +H  L           + + D  ++ +     PL          S G   A   A + P 
Sbjct: 137 IHHFLGTSTFSQ----YTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPG 192
Query: 183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAE 242
           +   + G G +GL  ++G +A GA RI+ VD++  + + AKELGA   +    N QD  +
Sbjct: 193 STCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECI----NPQDYKK 248
Query: 243 EVEKIQKAMGT-GIDVSFDCAG-FNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTP 297
            ++++ K M   G+D SF+  G  +  M++ L    A G   +VG+      + + P
Sbjct: 249 PIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINP 305

>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10 MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+ And 1 Mm 4-Iodopyrazole At 25 C Length = 374

Iteration: 1
 Score = 99.0 bits (245), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 132/297 (44%), Gaps = 40/297 (13%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     Y+V ++M AVGIC +D H +      + V   P+++GHE AG++E V
Sbjct: 21  FSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVS----GNLVTPLPVILGHEAAGIVESV 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-------------MKFFAT--PP 133
           G  V T+ PGD+V       C +C  CK    N C +              + F     P
Sbjct: 77  GEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKP 136
Query: 134 VHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGPE 182
           +H  L           + + D  ++ +     PL          S G   A   A + P 
Sbjct: 137 IHHFLGTSTFSQ----YTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPG 192
Query: 183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAE 242
           +   + G G +GL  ++G +A GA RI+ VD++  + + AKELGA   +    N QD  +
Sbjct: 193 STCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECI----NPQDYKK 248
Query: 243 EVEKIQKAMGT-GIDVSFDCAG-FNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTP 297
            ++++ K M   G+D SF+  G  +  M++ L    A G   +VG+      + + P
Sbjct: 249 PIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINP 305

>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a) Length = 374

Iteration: 1
 Score = 98.2 bits (243), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 134/293 (45%), Gaps = 32/293 (10%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M AVGICG+D H +        V   P+++GHE AG++E V
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVAVGICGTDDHVVS----GTMVTPLPVILGHEAAGIVESV 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLC-------PE-------MKFFA-TPP 133
           G  V T+ PGD+V       C +C  CK    N C       P+        +F     P
Sbjct: 77  GEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYCLKNDVSNPQGTLQDGTSRFTCRRKP 136
Query: 134 VH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGL-HACRRANIGPETNVL 186
           +H      + +   V   +   K+     LE+  +     S G   A   A + P +   
Sbjct: 137 IHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCA 196
Query: 187 IMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEK 246
           + G G +GL  ++G +A GA RI+ VD++  + + AKELGA   +    N QD  + +++
Sbjct: 197 VFGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGATECI----NPQDYKKPIQE 252
Query: 247 IQKAMGT-GIDVSFDCAG-FNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTP 297
           + K M   G+D SF+  G  +  M++ L    A G   +VG+      + + P
Sbjct: 253 VLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQNLSMNP 305

>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE BY EXCHANGE Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352

Iteration: 1
 Score = 97.8 bits (242), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 122/252 (48%), Gaps = 16/252 (6%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           E P+ GP+D +VR  AV  C SD+H   T+       +  M++GHE  G + +VGSEVK 
Sbjct: 18  EKPAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKD 74
Query: 95  LVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPP-VHGSLANQVVHPADLC 149
             PGDRV +      WR    + G +     M    KF      V G   +  V+ AD+ 
Sbjct: 75  FKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFH--VNDADMN 132
Query: 150 F-KLPDNVSLEEGAMC-EPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAP 207
              LP  + LE   M  + ++ G H    A+I   ++V+++G G +GL+ + GA+  GA 
Sbjct: 133 LAHLPKEIPLEAAVMIPDMMTTGFHGAELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAG 192
Query: 208 RIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKT 267
           RI+ V      +  AK  GA +I+        I ++V K+    G G+D      G ++T
Sbjct: 193 RIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQVMKLTN--GKGVDRVIMAGGGSET 248
Query: 268 MSTALSATRAGG 279
           +S A+   + GG
Sbjct: 249 LSQAVKMVKPGG 260

>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense Length = 374

Iteration: 1
 Score = 97.4 bits (241), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 134/293 (45%), Gaps = 32/293 (10%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +      + V   P+++GHE AG++E V
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVAAGICRSDEHVVS----GNLVTPLPVILGHEAAGIVESV 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE--------------MKFFAT-PP 133
           G  V T+ PGD+V       C +C  CK    N C +               +F  +  P
Sbjct: 77  GEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLKNDLGNPRGTLQDGTRRFTCSGKP 136
Query: 134 VH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGL-HACRRANIGPETNVL 186
           +H      + +   V   +   K+     LE+  +     S G   A + A + P +   
Sbjct: 137 IHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTPGSTCA 196
Query: 187 IMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEK 246
           + G G +GL  ++G +A GA RI+ VD++  + + AKELGA   +    N QD  + +++
Sbjct: 197 VFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATECI----NPQDYKKPIQE 252
Query: 247 IQKAMGT-GIDVSFDCAG-FNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTP 297
           + K M   G+D SF+  G  +  M++ L    A G   +VG+      + + P
Sbjct: 253 VLKEMTDGGVDFSFEVIGQLDTMMASLLCCHEACGTSVIVGVPPDSQNLSINP 305

>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a Resolution Length = 359

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 134/282 (47%), Gaps = 14/282 (4%)
Query: 14  GEEVNMAAWLLGVNT-LKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVV 71
           G E   AA L   N  L+I+  + P L G +DV+VR+   G+C +D+H ++ +       
Sbjct: 12  GVERLKAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQP 71
Query: 72  KEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT 131
           K P  +GHE  G IE+V   V+ L  GD V L P ++   C  C+ G    C  ++F   
Sbjct: 72  KLPYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGL 131
Query: 132 PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS----VGLHACRRA--NIGPETNV 185
             + G  A  +        KLP ++S E+     PL+        A ++A   + P   V
Sbjct: 132 -NIDGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYV 190
Query: 186 LIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVE 245
            I+G G +G + +   +      ++ +DV + +L +A+ LGAD++V      +D  ++V 
Sbjct: 191 AIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDAR---RDPVKQVM 247
Query: 246 KIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG 287
           ++ +  G G++V+ D  G   T+          G++ +VG G
Sbjct: 248 ELTR--GRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYG 287

>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx Length = 340

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/273 (31%), Positives = 130/273 (47%), Gaps = 20/273 (7%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE--PMVIGHECAGVIE 86
           L I    +P  GP  V V+++A G+C +D+H        D+ VK   P + GHE  G + 
Sbjct: 15  LTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAAD----GDWPVKPTLPFIPGHEGVGYVS 70
Query: 87  KVGSEVKTLVPGDRVALEPGI--SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
            VGS V  +  GDRV + P +  +C  C+HC  G   LC E +      V+G     VV 
Sbjct: 71  AVGSGVSRVKEGDRVGV-PWLYSACGYCEHCLQGWETLC-EKQQNTGYSVNGGYGEYVVA 128
Query: 145 PADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAR 202
             +    LPD V   E A  +C  ++V     +  +  P   V+I G G +G V +  AR
Sbjct: 129 DPNYVGLLPDKVGFVEIAPILCAGVTV-YKGLKVTDTRPGQWVVISGIGGLGHVAVQYAR 187
Query: 203 AFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 262
           A G  R+  VD+DD +L++A+ LGA+    V+ N +D  +    +QK +G G       A
Sbjct: 188 AMGL-RVAAVDIDDAKLNLARRLGAE----VAVNARD-TDPAAWLQKEIG-GAHGVLVTA 240
Query: 263 GFNKTMSTALSATRAGGKVCLVGMGHLEMTVPL 295
              K  S A+   R GG + L G+   +   P+
Sbjct: 241 VSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPI 273

>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From Thermotoga Maritima At 2.00 A Resolution Length = 380

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 137/290 (47%), Gaps = 34/290 (11%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L  + FE+  +    +LV + + G+CGSDVH     R  D  V  P+++GHE AG + +V
Sbjct: 30  LVYKEFEISDIPRGSILVEILSAGVCGSDVH---MFRGEDPRVPLPIILGHEGAGRVVEV 86
Query: 89  GSEVKTL-----VPGDRVALEPGISCWRCDHCKGGRY-NLCPEMKFFAT-------PPVH 135
             E + L      PGD +    GI+C  C  CK  +   LCP  K +         P + 
Sbjct: 87  NGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLR 146
Query: 136 GSLANQVV-HPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPET----NVLIMGA 190
           G  ++ +V  P     K+ +   L+  AM   +  G  A    +  PE+     V+I GA
Sbjct: 147 GCYSSHIVLDPETDVLKVSEKDDLDVLAMA--MCSGATAYHAFDEYPESFAGKTVVIQGA 204
Query: 191 GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA 250
           GP+GL  ++ AR+ GA  ++++     RL +A+E+GAD    ++ N ++ +  VE+ +KA
Sbjct: 205 GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGAD----LTLNRRETS--VEERRKA 258
Query: 251 M-----GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPL 295
           +     G G D   +  G ++ +       R GG   + G+   +  VP 
Sbjct: 259 IMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPF 308

>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score = 95.9 bits (237), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 132/298 (44%), Gaps = 43/298 (14%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVS----GTLVAPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V T+ PGD+V       C +C  CK    NLC  +K  + P                
Sbjct: 77  GEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLC--LKNLSMPRGTMQDGTSRFTCRGK 134
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
           P+H  L           + + D +S+ +     PL          S G   A + A +  
Sbjct: 135 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQ 190
Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
            +   + G G +GL  ++G +A GA RI+ VD++  + + AKE+GA   V    N QD  
Sbjct: 191 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDYK 246
Query: 242 EEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHLEMTVPLTP 297
           + ++++   M   G+D SF+  G   TM  ALS  + A G   +VG+      + + P
Sbjct: 247 KPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQNLSMNP 304

>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 132/298 (44%), Gaps = 43/298 (14%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVS----GTLVAPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V T+ PGD+V       C +C  CK    NLC  +K  + P                
Sbjct: 77  GEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLC--LKNLSMPRGTMQDGTSRFTCRGK 134
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
           P+H  L           + + D +S+ +     PL          S G   A + A +  
Sbjct: 135 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQ 190
Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
            +   + G G +GL  ++G +A GA RI+ VD++  + + AKE+GA   V    N QD  
Sbjct: 191 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDYK 246
Query: 242 EEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHLEMTVPLTP 297
           + ++++   M   G+D SF+  G   TM  ALS  + A G   +VG+      + + P
Sbjct: 247 KPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQNLSMNP 304

>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant Length = 374

Iteration: 1
 Score = 94.7 bits (234), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 82/298 (27%), Positives = 131/298 (43%), Gaps = 42/298 (14%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V T+ PGD+V       C +C  CK    N C +    + P                
Sbjct: 77  GEGVTTVRPGDKVIPLATPQCGKCRVCKHPEGNFCLKND-LSMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
           P+H  L           + + D +S+ +     PL          S G   A + A +  
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
            +   + G G +GL  ++G +A GA RI+ VD++  + + AKE+GA   V    N QD  
Sbjct: 192 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDYK 247
Query: 242 EEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHLEMTVPLTP 297
           + ++++   M   G+D SF+  G   TM TALS  + A G   +VG+      + + P
Sbjct: 248 KPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNP 305

>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of Horse Liver Alcohol Dehydrogenase In Complex With Nad And Inhibitor Trifluoroethanol Length = 374

Iteration: 1
 Score = 94.4 bits (233), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 82/298 (27%), Positives = 131/298 (43%), Gaps = 42/298 (14%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V T+ PGD+V       C +C  CK    N C +    + P                
Sbjct: 77  GEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKND-LSMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
           P+H  L           + + D +S+ +     PL          S G   A + A +  
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
            +   + G G +GL  ++G +A GA RI+ VD++  + + AKE+GA   V    N QD  
Sbjct: 192 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDYK 247
Query: 242 EEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHLEMTVPLTP 297
           + ++++   M   G+D SF+  G   TM TALS  + A G   +VG+      + + P
Sbjct: 248 KPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNP 305

>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double Mutant Of Gly 293 Ala And Pro 295 Thr Length = 374

Iteration: 1
 Score = 94.0 bits (232), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 121/273 (44%), Gaps = 41/273 (15%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V T+ PGD+V       C +C  CK    N C +    + P                
Sbjct: 77  GEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKND-LSMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
           P+H  L           + + D +S+ +     PL          S G   A + A +  
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
            +   + G G +GL  ++G +A GA RI+ VD++  + + AKE+GA   V    N QD  
Sbjct: 192 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDYK 247
Query: 242 EEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALS 273
           + ++++   M   G+D SF+  G   TM TALS
Sbjct: 248 KPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALS 280

>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver Alcohol Dehydrogenase At 2.9 Angstroms Resolution Length = 374

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/298 (27%), Positives = 131/298 (43%), Gaps = 42/298 (14%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V T+ PGD+V       C +C  CK    N C +    + P                
Sbjct: 77  GEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKND-LSMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
           P+H  L           + + D +S+ +     PL          S G   A + A +  
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
            +   + G G +GL  ++G +A GA RI+ VD++  + + AKE+GA   V    N QD  
Sbjct: 192 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDYK 247
Query: 242 EEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHLEMTVPLTP 297
           + ++++   M   G+D SF+  G   TM TALS  + A G   +VG+      + + P
Sbjct: 248 KPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNP 305

>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol Length = 374

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/298 (27%), Positives = 131/298 (43%), Gaps = 42/298 (14%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V T+ PGD+V       C +C  CK    N C +    + P                
Sbjct: 77  GEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKND-LSMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
           P+H  L           + + D +S+ +     PL          S G   A + A +  
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
            +   + G G +GL  ++G +A GA RI+ VD++  + + AKE+GA   V    N QD  
Sbjct: 192 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDYK 247
Query: 242 EEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHLEMTVPLTP 297
           + ++++   M   G+D SF+  G   TM TALS  + A G   +VG+      + + P
Sbjct: 248 KPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNP 305

>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant Complexed To Nad+ And Pyrazole Length = 374

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 121/273 (44%), Gaps = 41/273 (15%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V T+ PGD+V       C +C  CK    N C +    + P                
Sbjct: 77  GEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKND-LSMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
           P+H  L           + + D +S+ +     PL          S G   A + A +  
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
            +   + G G +GL  ++G +A GA RI+ VD++  + + AKE+GA   V    N QD  
Sbjct: 192 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDYK 247
Query: 242 EEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALS 273
           + ++++   M   G+D SF+  G   TM TALS
Sbjct: 248 KPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALS 280

>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant Length = 374

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 121/273 (44%), Gaps = 41/273 (15%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V T+ PGD+V       C +C  CK    N C +    + P                
Sbjct: 77  GEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKND-LSMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
           P+H  L           + + D +S+ +     PL          S G   A + A +  
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
            +   + G G +GL  ++G +A GA RI+ VD++  + + AKE+GA   V    N QD  
Sbjct: 192 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDYK 247
Query: 242 EEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALS 273
           + ++++   M   G+D SF+  G   TM TALS
Sbjct: 248 KPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALS 280

>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus Complexed With Nad(H) And 2-Ethoxyethanol Length = 347

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 128/265 (48%), Gaps = 12/265 (4%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK----TLRCA-DFVVKEPMVIGHECAG 83
           L +Q   +P      VL++++A G+C SDVH  +     LR   D  VK P+ +GHE AG
Sbjct: 13  LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
            IE+VG EV     GD VA+ P      C +C+ G  +LC   ++       G+ A  V+
Sbjct: 73  KIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVI 131
Query: 144 HP-ADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGP-ETNVLIMGAGPIGLVTMLGA 201
            P     +KL    ++E   +         A R+A++ P +T +++   G +G + +  A
Sbjct: 132 VPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIA 191
Query: 202 RAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 261
           +A     I+ VDV +  +  AK  GAD ++  S  +QD   E+ +I ++   G+D   D 
Sbjct: 192 KAVSGATIIGVDVREEAVEAAKRAGADYVINAS--MQDPLAEIRRITES--KGVDAVIDL 247
Query: 262 AGFNKTMSTALSATRAGGKVCLVGM 286
               KT+S    A    GK  +VG+
Sbjct: 248 NNSEKTLSVYPKALAKQGKYVMVGL 272

>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With Nad And Trifluoroethanol Length = 374

Iteration: 1
 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/298 (27%), Positives = 130/298 (43%), Gaps = 42/298 (14%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V T+ PGD+V       C +C  CK    N C +    + P                
Sbjct: 77  GEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKND-LSMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
           P+H  L           + + D +S+ +     PL          S G   A + A +  
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
            +   + G G  GL  ++G +A GA RI+ VD++  + + AKE+GA   V    N QD  
Sbjct: 192 GSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDYK 247
Query: 242 EEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHLEMTVPLTP 297
           + ++++   M   G+D SF+  G   TM TALS  + A G   +VG+      + + P
Sbjct: 248 KPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNP 305

>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol Length = 374

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 82/298 (27%), Positives = 130/298 (43%), Gaps = 42/298 (14%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD   +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDQVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V T+ PGD+V       C +C  CK    N C +    + P                
Sbjct: 77  GEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
           P+H  L           + + D +S+ +     PL          S G   A + A +  
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
            +   + G G +GL  ++G +A GA RI+ VD++  R + AKE+GA   V    N QD  
Sbjct: 192 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDRFAKAKEVGATECV----NPQDYK 247
Query: 242 EEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHLEMTVPLTP 297
           + ++++   M   G+D SF+  G   TM TALS  + A G   +VG+      + + P
Sbjct: 248 KPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNP 305

>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus-Monoclinic Crystal Form Length = 347

Iteration: 1
 Score = 92.4 bits (228), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 128/265 (48%), Gaps = 12/265 (4%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK----TLRCA-DFVVKEPMVIGHECAG 83
           L +Q   +P      VL++++A G+C SDVH  +     LR   D  VK P+ +GHE AG
Sbjct: 13  LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
            IE+VG EV     GD VA+ P      C +C+ G  +LC   ++       G+ A  V+
Sbjct: 73  KIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVI 131
Query: 144 HP-ADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGP-ETNVLIMGAGPIGLVTMLGA 201
            P     +KL    ++E   +         A R+A++ P +T +++   G +G + +  A
Sbjct: 132 VPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIA 191
Query: 202 RAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 261
           +A     I+ VDV +  +  AK  GAD ++  S  +QD   E+ +I ++   G+D   D 
Sbjct: 192 KAVSGATIIGVDVREEAVEAAKRAGADYVINAS--MQDPLAEIRRITES--KGVDAVIDL 247
Query: 262 AGFNKTMSTALSATRAGGKVCLVGM 286
               KT+S    A    GK  +VG+
Sbjct: 248 NYSEKTLSVYPKALAKQGKYVMVGL 272

>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From Acinetobacter Calcoaceticus Length = 371

Iteration: 1
 Score = 92.4 bits (228), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 124/281 (44%), Gaps = 48/281 (17%)
Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVA 102
           +VLV++ A G+C +D+     +R   + V  P V+GHE +G+IE +G  V  L  GD V 
Sbjct: 33  EVLVKVVATGMCHTDL----IVRDQKYPVPLPAVLGHEGSGIIEAIGPNVTELQVGDHVV 88
Query: 103 LEPGISCWRCDHCKGGRYNLCPEM--------------------------KFFATPPVHG 136
           L  G  C +C  C  G    C E                            FFA      
Sbjct: 89  LSYGY-CGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFA----QS 143
Query: 137 SLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLH----ACRRA-NIGPETNVLIMGAG 191
           S A   +   +   K+  +V +E   +  PL  G+     AC  A  + P ++ +  GAG
Sbjct: 144 SFATYALSRENNTVKVTKDVPIE---LLGPLGCGIQTGAGACINALKVTPASSFVTWGAG 200
Query: 192 PIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251
            +GL  +L A+  GA  I+ VD+ + RL +AK+LGA +++   T      + V  I++  
Sbjct: 201 AVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQ-----DPVAAIKEIT 255
Query: 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMT 292
             G++ + +  G  + +   + A    GK+ +VG   L  T
Sbjct: 256 DGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTT 296

>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver Alcohol Dehydrogenase Complexed With Cofactor Nad And Inhibitor Trifluoroethanol Solved To 2.5 Angstrom Resolution Length = 374

Iteration: 1
 Score = 92.4 bits (228), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 82/298 (27%), Positives = 130/298 (43%), Gaps = 42/298 (14%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V T+ PGD+V       C +C  CK    N C +    + P                
Sbjct: 77  GEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKND-LSMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
           P+H  L           + + D +S+ +     PL          S G   A + A +  
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
            +   + G G  GL  ++G +A GA RI+ VD++  + + AKE+GA   V    N QD  
Sbjct: 192 GSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDYK 247
Query: 242 EEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHLEMTVPLTP 297
           + ++++   M   G+D SF+  G   TM TALS  + A G   +VG+      + + P
Sbjct: 248 KPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNP 305

>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase (Adh4) In Complex With Nad And Zn Length = 381

Iteration: 1
 Score = 91.7 bits (226), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 131/291 (45%), Gaps = 39/291 (13%)
Query: 21  AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
           AW  G   L I+  E+     ++V +++ A  +C +D   + +       +  P+++GHE
Sbjct: 16  AWEAG-KPLCIEEVEVAPPKAHEVRIQIIATSLCHTDATVIDSKFEG---LAFPVIVGHE 71
Query: 81  CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-------- 132
            AG++E +G  V  + PGD+V       C +C  C     NLC ++    +P        
Sbjct: 72  AAGIVESIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNLKSPASDQQLME 131
Query: 133 -----------PVH----GSLANQVVHPADLCF-KLPDNVSLEEGAMCEPLSVGLH---- 172
                      PV+     S  +Q    +D+   K+ D+ +LE   +   L  G      
Sbjct: 132 DKTSRFTCKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCL---LGCGFSTGYG 188
Query: 173 -ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 231
            A   A + P +   + G G +GL  ++G +A GA RI+ +D++  +   AK LGA + +
Sbjct: 189 AAINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKALGATDCL 248
Query: 232 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVC 282
                 + I E + ++ K    G+D + DCAG ++TM  AL  T AG   C
Sbjct: 249 NPRDLHKPIQEVIIELTKG---GVDFALDCAGGSETMKAALDCTTAGWGSC 296

>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh) Double Mutant (W95l,N249y) Length = 347

Iteration: 1
 Score = 91.7 bits (226), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 128/265 (48%), Gaps = 12/265 (4%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK----TLRCA-DFVVKEPMVIGHECAG 83
           L +Q   +P      VL++++A G+C SDVH  +     LR   D  VK P+ +GHE AG
Sbjct: 13  LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
            IE+VG EV     GD VA+ P      C +C+ G  +LC   ++       G+ A  V+
Sbjct: 73  KIEEVGDEVVGYSKGDLVAVNPLQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVI 131
Query: 144 HP-ADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGP-ETNVLIMGAGPIGLVTMLGA 201
            P     +KL    ++E   +         A R+A++ P +T +++   G +G + +  A
Sbjct: 132 VPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIA 191
Query: 202 RAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 261
           +A     I+ VDV +  +  AK  GAD ++  S  +QD   E+ +I ++   G+D   D 
Sbjct: 192 KAVSGATIIGVDVREEAVEAAKRAGADYVINAS--MQDPLAEIRRITES--KGVDAVIDL 247
Query: 262 AGFNKTMSTALSATRAGGKVCLVGM 286
               KT+S    A    GK  +VG+
Sbjct: 248 NYSEKTLSVYPKALAKQGKYVMVGL 272

>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus Length = 347

Iteration: 1
 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 126/265 (47%), Gaps = 12/265 (4%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK----TLR-CADFVVKEPMVIGHECAG 83
           L +Q   +P      VL++++A G+C SDVH  +     LR   D  VK P+ +GHE AG
Sbjct: 13  LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHXRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
            IE+VG EV     GD VA+ P      C +C+ G  +LC   ++       G+ A  V+
Sbjct: 73  KIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVI 131
Query: 144 HPA-DLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGP-ETNVLIMGAGPIGLVTMLGA 201
            P     +KL    ++E   +         A R+A++ P +T +++   G +G   +  A
Sbjct: 132 VPHYKYXYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTXAVQIA 191
Query: 202 RAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 261
           +A     I+ VDV +  +  AK  GAD ++  S  +QD   E+ +I ++   G+D   D 
Sbjct: 192 KAVSGATIIGVDVREEAVEAAKRAGADYVINAS--MQDPLAEIRRITES--KGVDAVIDL 247
Query: 262 AGFNKTMSTALSATRAGGKVCLVGM 286
               KT+S    A    GK   VG+
Sbjct: 248 NNSEKTLSVYPKALAKQGKYVXVGL 272

>pdb|3IP1|A Chain A, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From Thermotoga Maritima Length = 404

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 127/280 (45%), Gaps = 41/280 (14%)
Query: 41  PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE----PMVIGHECAGVIEKVGSEV---- 92
           P ++++++KA GICGSDVH  +T      +       P+ +GHE +GV+ + G E     
Sbjct: 55  PTEIIIKVKACGICGSDVHXAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRR 114
Query: 93  --KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCF 150
             K    G+ V  E  + C  C  C  G  N C  +       V G+ A  V   A   +
Sbjct: 115 TNKRFEIGEPVCAEEXLWCGHCRPCAEGFPNHCENLNELGFN-VDGAFAEYVKVDAKYAW 173
Query: 151 KLPDNVSLEEG-------AMCEPLSVGLHAC--RRANIGPETNVLIMGAGPIGLVTMLGA 201
            L +   + EG       ++ EP SV  +A   R   I P  NV+I+G GPIGL  +   
Sbjct: 174 SLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAIL 233
Query: 202 RAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG-------TG 254
           +  GA ++++ +  + R ++AKELGAD+++  +   ++  E V      +G       TG
Sbjct: 234 KHAGASKVILSEPSEVRRNLAKELGADHVIDPTK--ENFVEAVLDYTNGLGAKLFLEATG 291
Query: 255 I---------DVSFDCAGFNKTMSTALSATRAGGKVCLVG 285
           +         +V +   G N T++      RA  K+ L G
Sbjct: 292 VPQLVWPQIEEVIWRARGINATVAI---VARADAKIPLTG 328

>pdb|1Y9A|A Chain A, Alcohol Dehydrogenase From Entamoeba Histolotica In Complex With Cacodylate Length = 360

Iteration: 1
 Score = 88.6 bits (218), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 128/301 (42%), Gaps = 32/301 (10%)
Query: 23  LLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECA 82
           +LG+  +     ++P  GP D LVR  A+  C SD H +      D   +  M++GHE  
Sbjct: 6   MLGIGRIGWIEKKIPECGPLDALVRPLALAPCTSDTHTVWAGAIGD---RHDMILGHEAV 62
Query: 83  GVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGR-YNLCPEMKFFATPPVHGSLANQ 141
           G I KVGS VK L  GD+V +      W  +  + G   +    +  +        + ++
Sbjct: 63  GQIVKVGSLVKRLKVGDKVIVPAITPDWGEEESQRGYPMHSGGMLGGWKFSNFKDGVFSE 122
Query: 142 VVH----PADLCFKLPDNVSLEEGAMCEPL-SVGLHACRRANIGPETNVLIMGAGPIGLV 196
           V H     A+L   LP ++  E+  M   + + G H    ANI     V ++G GP+GL+
Sbjct: 123 VFHVNEADANLAL-LPRDIKPEDAVMLSDMVTTGFHGAELANIKLGDTVCVIGIGPVGLM 181
Query: 197 TMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 256
           ++ GA   GA RI  V    +   +A E GA +I+       DI E++  ++   G G+D
Sbjct: 182 SVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNG--DIVEQI--LKATDGKGVD 237
Query: 257 VSFDCAGFNKTMSTALSATRAGGKV------------------CLVGMGHLEMTVPLTPA 298
                 G   T + A+   + G  +                    VGMGH  +   LTP 
Sbjct: 238 KVVIAGGXVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLTPG 297
Query: 299 A 299
Sbjct: 298 G 298

>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase (Adh8) Length = 373

Iteration: 1
 Score = 88.2 bits (217), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 123/283 (43%), Gaps = 35/283 (12%)
Query: 24  LGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAG 83
           L + T+ + P +      ++V +++ A GICGSD   LK +  + F    P+++GHE  G
Sbjct: 22  LSLETITVAPPK-----AHEVRIKILASGICGSDSSVLKEIIPSKF----PVILGHEAVG 72
Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
           V+E +G+ V  + PGD+V       C  C  CK    N C +    A   +   + ++  
Sbjct: 73  VVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFT 132
Query: 144 HPADLCFKLPDNVSLEEGAMCEPLSVG-------LHAC--------------RRANIGPE 182
                 + L    +  E  +   ++V        L +C                A + P 
Sbjct: 133 CRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLESCLIGCGFATGYGAAVNTAKVTPG 192
Query: 183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAE 242
           +   + G G +G   ++G +A GA RI+ V     +   A ELGA   +    N +D  +
Sbjct: 193 STCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECL----NPKDYDK 248
Query: 243 EV-EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV 284
            + E I +    G+D + +CAG  +TM  AL +T  G  V +V
Sbjct: 249 PIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVV 291

>pdb|2OUI|A Chain A, D275p Mutant Of Alcohol Dehydrogenase From Protozoa Entamoeba Histolytica Length = 360

Iteration: 1
 Score = 87.8 bits (216), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 128/301 (42%), Gaps = 32/301 (10%)
Query: 23  LLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECA 82
           +LG+  +     ++P  GP D LVR  A+  C SD H +      D   +  M++GHE  
Sbjct: 6   MLGIGRIGWIEKKIPECGPLDALVRPLALAPCTSDTHTVWAGAIGD---RHDMILGHEAV 62
Query: 83  GVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGR-YNLCPEMKFFATPPVHGSLANQ 141
           G I KVGS VK L  GD+V +      W  +  + G   +    +  +        + ++
Sbjct: 63  GQIVKVGSLVKRLKVGDKVIVPAITPDWGEEESQRGYPMHSGGMLGGWKFSNFKDGVFSE 122
Query: 142 VVH----PADLCFKLPDNVSLEEGAMCEPL-SVGLHACRRANIGPETNVLIMGAGPIGLV 196
           V H     A+L   LP ++  E+  M   + + G H    ANI     V ++G GP+GL+
Sbjct: 123 VFHVNEADANLAL-LPRDIKPEDAVMLSDMVTTGFHGAELANIKLGDTVCVIGIGPVGLM 181
Query: 197 TMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 256
           ++ GA   GA RI  V    +   +A E GA +I+       DI E++  ++   G G+D
Sbjct: 182 SVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNG--DIVEQI--LKATDGKGVD 237
Query: 257 VSFDCAGFNKTMSTALSATRAGGKV------------------CLVGMGHLEMTVPLTPA 298
                 G   T + A+   + G  +                    VGMGH  +   LTP 
Sbjct: 238 KVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIPIPRSEWGVGMGHKHIHGGLTPG 297
Query: 299 A 299
Sbjct: 298 G 298

>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With N6022 Length = 374

Iteration: 1
 Score = 85.9 bits (211), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 118/281 (41%), Gaps = 31/281 (11%)
Query: 21  AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
           AW  G   L I+  E+     ++V +++ A  +C +D +   TL  AD     P+++GHE
Sbjct: 13  AWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPEGCFPVILGHE 68
Query: 81  CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN 140
            AG++E VG  V  L  GD V       C  C  C   + NLC +++      +     +
Sbjct: 69  GAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTS 128
Query: 141 QVVHPADLCFKLPDNVSLEEGAMCEPLSVGL----------------------HACRRAN 178
           +               +  E  +   +SV                         A   A 
Sbjct: 129 RFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAK 188
Query: 179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQ 238
           + P +   + G G +GL  ++G +  GA RI+ VD++  + + AKE GA   +    N Q
Sbjct: 189 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI----NPQ 244
Query: 239 DIAEEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATRAG 278
           D ++ ++++   M   G+D SF+C G  K M  AL A   G
Sbjct: 245 DFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG 285

>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A Glutathione- Dependent Formaldehyde Dehydrogenase) Length = 373

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 118/281 (41%), Gaps = 31/281 (11%)
Query: 21  AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
           AW  G   L I+  E+     ++V +++ A  +C +D +   TL  AD     P+++GHE
Sbjct: 12  AWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPEGCFPVILGHE 67
Query: 81  CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN 140
            AG++E VG  V  L  GD V       C  C  C   + NLC +++      +     +
Sbjct: 68  GAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTS 127
Query: 141 QVVHPADLCFKLPDNVSLEEGAMCEPLSVGL----------------------HACRRAN 178
           +               +  E  +   +SV                         A   A 
Sbjct: 128 RFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAK 187
Query: 179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQ 238
           + P +   + G G +GL  ++G +  GA RI+ VD++  + + AKE GA   +    N Q
Sbjct: 188 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI----NPQ 243
Query: 239 DIAEEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATRAG 278
           D ++ ++++   M   G+D SF+C G  K M  AL A   G
Sbjct: 244 DFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG 284

>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With S-(Hydroxymethyl)glutathione And Nadh Length = 374

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 118/281 (41%), Gaps = 31/281 (11%)
Query: 21  AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
           AW  G   L I+  E+     ++V +++ A  +C +D +   TL  AD     P+++GHE
Sbjct: 13  AWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPEGCFPVILGHE 68
Query: 81  CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN 140
            AG++E VG  V  L  GD V       C  C  C   + NLC +++      +     +
Sbjct: 69  GAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTS 128
Query: 141 QVVHPADLCFKLPDNVSLEEGAMCEPLSVGL----------------------HACRRAN 178
           +               +  E  +   +SV                         A   A 
Sbjct: 129 RFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAK 188
Query: 179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQ 238
           + P +   + G G +GL  ++G +  GA RI+ VD++  + + AKE GA   +    N Q
Sbjct: 189 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI----NPQ 244
Query: 239 DIAEEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATRAG 278
           D ++ ++++   M   G+D SF+C G  K M  AL A   G
Sbjct: 245 DFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG 285

>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With Nad(H) Length = 373

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 117/281 (41%), Gaps = 31/281 (11%)
Query: 21  AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
           AW  G   L I+  E+     ++V +++ A  +C +D +   TL  AD     P+++GH 
Sbjct: 12  AWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPEGCFPVILGHL 67
Query: 81  CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN 140
            AG++E VG  V  L  GD V       C  C  C   + NLC +++      +     +
Sbjct: 68  GAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTS 127
Query: 141 QVVHPADLCFKLPDNVSLEEGAMCEPLSVGL----------------------HACRRAN 178
           +               +  E  +   +SV                         A   A 
Sbjct: 128 RFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAK 187
Query: 179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQ 238
           + P +   + G G +GL  ++G +  GA RI+ VD++  + + AKE GA   +    N Q
Sbjct: 188 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI----NPQ 243
Query: 239 DIAEEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATRAG 278
           D ++ ++++   M   G+D SF+C G  K M  AL A   G
Sbjct: 244 DFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG 284

>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase Length = 373

Iteration: 1
 Score = 81.3 bits (199), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 69/304 (22%), Positives = 128/304 (42%), Gaps = 37/304 (12%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+      +V +++ A GIC +D H +K       V K P+++GHE  G++E +
Sbjct: 21  FSIEEIEVAPPKTKEVRIKILATGICRTDDHVIK----GTMVSKFPVIVGHEATGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF-----FATPPVHGSLANQVV 143
           G  V T+ PGD+V       C  C+ C+    NLC           A      +   + V
Sbjct: 77  GEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPV 136
Query: 144 HPADLCFKLPDNVSLEEGAMCE------PLSVGLHAC----------RRANIGPETNVLI 187
           H         +   ++E ++ +      P  V L  C          +   + P +  ++
Sbjct: 137 HHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVV 196
Query: 188 MGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKI 247
            G G +GL  ++G ++ GA RI+ +D++  +   A  +GA   +    + + I+E + ++
Sbjct: 197 FGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKDSTKPISEVLSEM 256
Query: 248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSF 307
               G  +  +F+  G  +TM  AL++           M +    V   P +A+ L Y  
Sbjct: 257 T---GNNVGYTFEVIGHLETMIDALASCH---------MNYGTSVVVGVPPSAKMLTYDP 304
Query: 308 LFHF 311
           +  F
Sbjct: 305 MLLF 308

>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine At Position 141 Length = 373

Iteration: 1
 Score = 80.9 bits (198), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 69/304 (22%), Positives = 128/304 (42%), Gaps = 37/304 (12%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+      +V +++ A GIC +D H +K       V K P+++GHE  G++E +
Sbjct: 21  FSIEEIEVAPPKTKEVRIKILATGICRTDDHVIK----GTMVSKFPVIVGHEATGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF-----FATPPVHGSLANQVV 143
           G  V T+ PGD+V       C  C+ C+    NLC           A      +   + V
Sbjct: 77  GEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPV 136
Query: 144 HPADLCFKLPDNVSLEEGAMCE------PLSVGLHAC----------RRANIGPETNVLI 187
           H         +   ++E ++ +      P  V L  C          +   + P +  ++
Sbjct: 137 HHFLNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVV 196
Query: 188 MGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKI 247
            G G +GL  ++G ++ GA RI+ +D++  +   A  +GA   +    + + I+E + ++
Sbjct: 197 FGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKDSTKPISEVLSEM 256
Query: 248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSF 307
               G  +  +F+  G  +TM  AL++           M +    V   P +A+ L Y  
Sbjct: 257 T---GNNVGYTFEVIGHLETMIDALASCH---------MNYGTSVVVGVPPSAKMLTYDP 304
Query: 308 LFHF 311
           +  F
Sbjct: 305 MLLF 308

>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From Arabidopsis Thaliana, Complex With Nadh Length = 378

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 104/252 (41%), Gaps = 35/252 (13%)
Query: 74  PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF----- 128
           P ++GHE AG++E VG  V  +  GD V       C  C  CK G+ NLC +++      
Sbjct: 63  PCILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVG 122
Query: 129 ---------FAT--PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL-SVGLHAC-- 174
                    F+    P++  +           + +  +VS+ +     PL  V L  C  
Sbjct: 123 IMMNDRKSRFSVNGKPIYHFMGTSTFSQ----YTVVHDVSVAKIDPTAPLDKVCLLGCGV 178
Query: 175 --------RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG 226
                     A + P +NV I G G +GL    GA+  GA RI+ +D+D  +   AK+ G
Sbjct: 179 PTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFG 238
Query: 227 ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVG 285
            +  V    + + I E +  +      G+D SF+C G    M  AL     G G   +VG
Sbjct: 239 VNEFVNPKDHDKPIQEVIVDLTDG---GVDYSFECIGNVSVMRAALECCHKGWGTSVIVG 295
Query: 286 MGHLEMTVPLTP 297
           +      +   P
Sbjct: 296 VAASGQEISTRP 307

>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) In Complex With Nad+ Length = 396

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 114/283 (40%), Gaps = 38/283 (13%)
Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVA 102
           +V V++    +C +D +   T    D     P V+GHE AG++E VG  V  + PGD V 
Sbjct: 53  EVRVKVLYTALCHTDAY---TWSGKDPEGLFPCVLGHEAAGIVESVGEGVTEVQPGDHVI 109
Query: 103 LEPGISCWRCDHCKGGRYNLCPEMK----------------FFATPPVHGSLANQVVHPA 146
                 C  C  CK G+ NLC +++                     P++  +        
Sbjct: 110 PCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQ- 168
Query: 147 DLCFKLPDNVSLEEGAMCEPLS----------VGLHAC-RRANIGPETNVLIMGAGPIGL 195
              + +  +VS+ +     PL            GL A    A + P + V + G G +GL
Sbjct: 169 ---YTVVHDVSVAKIDPVAPLEKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGL 225
Query: 196 VTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 255
               GA+A GA RI+ +D+D  +   AK  G    +    + Q I + +  +      G+
Sbjct: 226 AVAEGAKAAGASRIIGIDIDSKKFDRAKNFGVTEFINPKEHEQPIQQVIVDLTDG---GV 282
Query: 256 DVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHLEMTVPLTP 297
           D SF+C G    M +AL     G G   +VG+      +   P
Sbjct: 283 DYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRP 325

>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed With Nicotinamide Adenine Dinucleotide (Nad), And Zinc Length = 374

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 133/308 (43%), Gaps = 31/308 (10%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+  E+      ++ +++ A G+C +D+++L   +  D     P+V+GHE AG++E V
Sbjct: 21  LVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGF---PVVLGHEGAGIVESV 77
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV----------HGSL 138
           G  V    PG++V       C  C  C+  + N C +     +P V           G  
Sbjct: 78  GPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRK 137
Query: 139 ANQVVHPADLC-FKLPDNVSLEEGAMCEPL-SVGLHAC----------RRANIGPETNVL 186
             Q +  +    + + + +++ +     PL +V L  C            A + P +   
Sbjct: 138 VLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCA 197
Query: 187 IMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEK 246
           + G G +GL  ++G  + GA RI+ VD++  +   AK  GA + V  + + + I++ + K
Sbjct: 198 VFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSK 257
Query: 247 IQKAMGTGIDVSFDCAGFNKTMSTAL-SATRAGGKVCLVGMGHLE--MTVPLTPAAARYL 303
           +      G+D S +C G    M  AL S  +  G   LVG   L    T P+   A R  
Sbjct: 258 MTNG---GVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRTW 314
Query: 304 IYSFLFHF 311
             S    F
Sbjct: 315 KGSMFGGF 322

>pdb|2DPH|A Chain A, Crystal Structure Of Formaldehyde Dismutase Length = 398

Iteration: 1
 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 136/307 (44%), Gaps = 47/307 (15%)
Query: 18  NMAAWLLGVNTLKIQPFELPSLG------PYDVLVRMKAVGICGSDVHYLKTLRCADFVV 71
           N +    G   L+++    P L        + V++++ +  ICGSD H  +      F+V
Sbjct: 3   NKSVVYHGTRDLRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYR----GRFIV 58
Query: 72  KEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLC------PE 125
            +  V+GHE  G + + GS+V+ +  GD V++   ++C RC +CK  R ++C      P+
Sbjct: 59  PKGHVLGHEITGEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPD 118
Query: 126 MKF----FATPPVHGSLANQVVHP-AD-LCFKLPDNVSLEEGA-----MCEPLSVGLHAC 174
                  F      G  A  V+ P AD +  K  D     E       + + L  G H C
Sbjct: 119 ADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGC 178
Query: 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS 234
             A + P ++V I GAGP+G     GAR  GA  +++ D +  RL +  + G + I    
Sbjct: 179 VSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETI---- 234
Query: 235 TNLQDIAEEVEKIQKAMGT-GIDVSFDCAGF--------------NKTMSTALSATRAGG 279
            +L++ A   ++I + +G   +D   D  GF              N  +++     RAGG
Sbjct: 235 -DLRNSAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGG 293
Query: 280 KVCLVGM 286
            + + G+
Sbjct: 294 AIGIPGI 300

>pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+ Length = 366

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 134/305 (43%), Gaps = 26/305 (8%)
Query: 2   GKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELP--SLGPYDVLVRMKAVGICGSDVH 59
           G  GMS+  +E+   V    W     +  + PF     + G  DV  ++   G+C SD+H
Sbjct: 1   GSHGMSKSPEEE-HPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLH 59
Query: 60  YLKTLRCADF-VVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWRCDHCKG 117
            +K     D+     P+V GHE  G + +VGS+VK +  GD+V +   + +C  C+ C  
Sbjct: 60  SIKN----DWGFSMYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCAN 115
Query: 118 GRYNLCPEMKFFATPPVH------GSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSV 169
              N CP+M        H      G  +N +V       + PDN+ L+ GA  +C  ++V
Sbjct: 116 DLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITV 175
Query: 170 GLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN 229
                      P  ++ I+G G +G V +  A+AFG+   VI      +    K  GAD+
Sbjct: 176 YSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADS 235
Query: 230 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL 289
            +        ++ + E++Q A GT +D   D       +       ++ GK+ LVG    
Sbjct: 236 FL--------VSRDQEQMQAAAGT-LDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEK 286
Query: 290 EMTVP 294
            + +P
Sbjct: 287 PLELP 291

>pdb|1KOL|A Chain A, Crystal Structure Of Formaldehyde Dehydrogenase Length = 398

Iteration: 1
 Score = 71.2 bits (173), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 132/311 (42%), Gaps = 54/311 (17%)
Query: 18  NMAAWLLGVNTLKIQPFELPSLG-------PYDVLVRMKAVGICGSDVHYLKTLRCADFV 70
           N     LG   +++Q  + P +         + V++++ +  ICGSD H ++    A   
Sbjct: 3   NRGVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQV- 61
Query: 71  VKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK--- 127
               +V+GHE  G + + G +V+ L  GD V++   ++C RC  CK     +C  +    
Sbjct: 62  ---GLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPAR 118
Query: 128 ------FFATPPVHGSLANQVVHP-ADL-CFKLPDNVSLEEG-----AMCEPLSVGLHAC 174
                 +       G  A  V+ P AD    KLPD     E       + + L  G H  
Sbjct: 119 AGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGA 178
Query: 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG---ADNIV 231
             A +GP + V + GAGP+GL     AR  GA  +++ D++  RL+ AK  G   AD  +
Sbjct: 179 VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIAD--L 236
Query: 232 KVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGFN---------------KTMSTALSAT 275
            + T L       E+I   +G   +D + D  GF                  +++ +  T
Sbjct: 237 SLDTPLH------EQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVT 290
Query: 276 RAGGKVCLVGM 286
           R  GK+ + G+
Sbjct: 291 RVAGKIGIPGL 301

>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase Length = 333

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 117/260 (45%), Gaps = 38/260 (14%)
Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
           G +    +  ++ S GP  V +R  A+G+   D ++   +     V + P+V+G E A V
Sbjct: 12  GPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAV 71
Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           +E+VG  V     G+RV      +C                      PP+ G+ + + ++
Sbjct: 72  VEEVGPGVTDFTVGERVC-----TC---------------------LPPL-GAYSQERLY 104
Query: 145 PADLCFKLPDNVSLEE----GAMCEPLSVGLHACRRANIGPETNVLI-MGAGPIGLVTML 199
           PA+   K+P ++ L++    G M + ++      +   + P   VLI   AG +G + + 
Sbjct: 105 PAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVP 164
Query: 200 GARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259
            AR  GA  I  V  ++ +   A++LG  + +  ST  QD AE V +I    G G+DV +
Sbjct: 165 WARHLGATVIGTVSTEE-KAETARKLGCHHTINYST--QDFAEVVREITG--GKGVDVVY 219
Query: 260 DCAGFNKTMSTALSATRAGG 279
           D  G   T+  +L   R  G
Sbjct: 220 DSIG-KDTLQKSLDCLRPRG 238

>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From Sulfolobus Solfataricus Length = 344

Iteration: 1
 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 113/264 (42%), Gaps = 15/264 (5%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+   +P     +VL+R+   G+C +D+   K +  A    + P+++GHE AG I +V
Sbjct: 16  LSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVE-AKQGFRLPIILGHENAGTIVEV 74
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL 148
           G E+  +  GD V +        C +C+ G++N+C            G     +V  +  
Sbjct: 75  G-ELAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSRW 133
Query: 149 CFKLPDNVSLEEGAMCEPLSVGLHACRRA----NIGPETNVLIMGAGPIGLVTMLGARAF 204
             KL     +E   + +  +  + A R+A    +   E  V++ G G + + T+   +A 
Sbjct: 134 LVKLNSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEPVVIVNGIGGLAVYTIQILKAL 193
Query: 205 GAPRIVIVDVDDYR--LSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 262
               I IV +   +     A ELGAD +    + ++D    + K+   +G  I  + D  
Sbjct: 194 -MKNITIVGISRSKKHRDFALELGADYV----SEMKDAESLINKLTDGLGASI--AIDLV 246
Query: 263 GFNKTMSTALSATRAGGKVCLVGM 286
           G  +T           G + LVGM
Sbjct: 247 GTEETTYNLGKLLAQEGAIILVGM 270

>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori Complexed With Nadp(H) Length = 348

Iteration: 1
 Score = 64.7 bits (156), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 107/244 (43%), Gaps = 25/244 (10%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE---PMVIGHECAGVI 85
            K   F   ++GP DVL+ +   GIC SD+H       A    KE   PM+ GHE AG+I
Sbjct: 17  FKPHDFSRHAVGPRDVLIDILYAGICHSDIH------SAYSEWKEGIYPMIPGHEIAGII 70
Query: 86  EKVGSEVKTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEM--------KFFATPPVHG 136
           ++VG  VK    GD V +   + SC  C  CK  +   C ++         F    P  G
Sbjct: 71  KEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMG 130
Query: 137 SLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIG 194
             +N +V   +    +  N  LE+ A  +C  ++      + + +   T V + G G +G
Sbjct: 131 GYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITT-YSPLKFSKVTKGTKVGVAGFGGLG 189
Query: 195 LVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTG 254
            + +  A A GA  + +   ++++   A  +G  +     T+ +   EE++ I   + T 
Sbjct: 190 SMAVKYAVAMGA-EVSVFARNEHKKQDALSMGVKHFY---TDPKQCKEELDFIISTIPTH 245
Query: 255 IDVS 258
            D+ 
Sbjct: 246 YDLK 249

>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato Dc3000 Quinone Oxidoreductase Length = 325

Iteration: 1
 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 113/264 (42%), Gaps = 39/264 (14%)
Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
           G   L+   FE  + GP  V+VR KA+G+   D +Y   L  A F+   P  +G E AGV
Sbjct: 12  GPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFL---PSGLGAEGAGV 68
Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           +E VG EV     GDRVA                          + T P+ G+ +   V 
Sbjct: 69  VEAVGDEVTRFKVGDRVA--------------------------YGTGPL-GAYSEVHVL 101
Query: 145 PADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLI-MGAGPIGLVTMLGA 201
           P     KL D+VS E+ A  M + L+V     +   + P   +L    AG +G +    A
Sbjct: 102 PEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWA 161
Query: 202 RAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 261
           +A GA  I  V   + + + AK LGA   +  S   +D+A+ V ++    G    V +D 
Sbjct: 162 KALGAKLIGTVSSPE-KAAHAKALGAWETIDYSH--EDVAKRVLELTD--GKKCPVVYDG 216
Query: 262 AGFNKTMSTALSATRAGGKVCLVG 285
            G   T  T+L +    G V   G
Sbjct: 217 VG-QDTWLTSLDSVAPRGLVVSFG 239

>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae Fermentative Enzyme Length = 347

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 116/265 (43%), Gaps = 19/265 (7%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFV--VKEPMVIGHECAGVIE 86
           L+ +   +P     ++L+ +K  G+C +D+H        D+   VK P+V GHE AGV+ 
Sbjct: 18  LEYKDIPVPKPKANELLINVKYSGVCHTDLHAWH----GDWPLPVKLPLVGGHEGAGVVV 73
Query: 87  KVGSEVKTLVPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHP 145
            +G  VK    GD   ++    SC  C++C+ G  + CP           GS        
Sbjct: 74  GMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTH-DGSFQQYATAD 132
Query: 146 ADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMG-AGPIGLVTMLGAR 202
           A     +P    L + A  +C  ++V   A + AN+     V I G AG +G + +  A+
Sbjct: 133 AVQAAHIPQGTDLAQVAPILCAGITV-YKALKSANLMAGHWVAISGAAGGLGSLAVQYAK 191
Query: 203 AFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTG-IDVSFDC 261
           A G  R++ +D  + +  + + +G +  +   T  +DI   V K       G I+VS   
Sbjct: 192 AMGY-RVLGIDGGEGKEELFRSIGGEVFIDF-TKEKDIVGAVLKATDGGAHGVINVSVSE 249
Query: 262 AGFNKTMSTALSATRAGGKVCLVGM 286
           A     +  +    RA G   LVGM
Sbjct: 250 A----AIEASTRYVRANGTTVLVGM 270

>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 117/276 (42%), Gaps = 19/276 (6%)
Query: 27  NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE 86
           + LK+    +P  G +D++VR  AV +   D   L+T    D     P V   + +GV+E
Sbjct: 39  HDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGXGLDLAF--PFVPASDXSGVVE 96
Query: 87  KVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH-GSLANQVVHP 145
            VG  V    PGDRV     IS +      G R        +      H G L+  VV P
Sbjct: 97  AVGKSVTRFRPGDRV-----ISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLP 151
Query: 146 ADLCFKLPDNVSLEEGAM--CEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARA 203
                  P ++   E +   C  L+       + ++     V++ G G + L  +  A+A
Sbjct: 152 EGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKA 211
Query: 204 FGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG-TGIDVSFDCA 262
            GA  +++      +L  A  LGAD+ +     L++  + VE++    G  G D   + A
Sbjct: 212 TGA-EVIVTSSSREKLDRAFALGADHGI---NRLEE--DWVERVYALTGDRGADHILEIA 265
Query: 263 GFNKTMSTALSATRAGGKVCLVG-MGHLEMTVPLTP 297
           G    +  +L A    G++ ++G +   E++ P+ P
Sbjct: 266 G-GAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGP 300

>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Zeta-Crystallin-Like Quinone Oxidoreductase Zta1 Length = 334

Iteration: 1
 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 116/277 (41%), Gaps = 48/277 (17%)
Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKT-LRCADFVVKEPMVIGHECAG 83
           G + +K + + +PS+   ++L++ K  G     V+Y+++  R   +  ++P V+G E +G
Sbjct: 19  GYDVIKYEDYPVPSISEEELLIKNKYTG-----VNYIESYFRKGIYPCEKPYVLGREASG 73
Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
            +   G  V     GD+VA           +    +Y+     K  +  PV         
Sbjct: 74  TVVAKGKGVTNFEVGDQVAY--------ISNSTFAQYS-----KISSQGPV--------- 111
Query: 144 HPADLCFKLPDNVSLEE-----GAMCEPLSVGLHACRRANIGPETNVLIMGA-GPIGLVT 197
                  KLP   S EE       + + L+         ++     VL+  A G +GL+ 
Sbjct: 112 ------MKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLIL 165
Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257
               +  GA  I +   D+ +L +AKE GA+ ++  S   +DI  +V K     G G+D 
Sbjct: 166 NQLLKMKGAHTIAVASTDE-KLKIAKEYGAEYLINASK--EDILRQVLKFTN--GKGVDA 220
Query: 258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVP 294
           SFD  G   T   +L+A +  G    V  G+    +P
Sbjct: 221 SFDSVG-KDTFEISLAALKRKG--VFVSFGNASGLIP 254

>pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol Dehydrogenase-Like Protein Yahk Length = 369

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 19/226 (8%)
Query: 40  GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGD 99
           GP DV + +   G+C SD+H +++          P V GHE  G +  VG +V+   PGD
Sbjct: 46  GPNDVKIEIAYCGVCHSDLHQVRSEWAGTVY---PCVPGHEIVGRVVAVGDQVEKYAPGD 102
Query: 100 RVALEPGI-SCWRCDHCKGGRYNLCPEMK-FFATP----PVH--GSLANQVVHPADLCFK 151
            V +   + SC  C+ C+ G  N C  M   + +P    P H  G  + Q+V       +
Sbjct: 103 LVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLR 162
Query: 152 LPDNVSLEEGAMCEPL----SVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAP 207
           +      E+ A   PL           R    GP   V ++G G +G + +  A A GA 
Sbjct: 163 I--RHPQEQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGA- 219
Query: 208 RIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT 253
            +V     + +   AK LGAD +V  S N  ++A  ++     + T
Sbjct: 220 HVVAFTTSEAKREAAKALGADEVVN-SRNADEMAAHLKSFDFILNT 264

>pdb|1PS0|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Cinnamyl Alcohol Dehydrogenase From Saccharomyces Cerevisiae Length = 360

Iteration: 1
 Score = 54.3 bits (129), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)
Query: 42  YDVLVRMKAVGICGSDVHYLKTLRCAD---FVVKEPMVIGHECAGVIEKVGSEVKT-LVP 97
           +D+ ++++A G+CGSD+H      CA      +K P+V+GHE  G + K+G +  + L  
Sbjct: 34  HDIDIKIEACGVCGSDIH------CAAGHWGNMKMPLVVGHEIVGKVVKLGPKSNSGLKV 87
Query: 98  GDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFATPPV------HGSLANQVVHPADLCF 150
           G RV +   + SC  CD CK      C +     + P        G  AN V        
Sbjct: 88  GQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVV 147
Query: 151 KLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPR 208
            +P+N+     A  +C  L+V      R   GP   V I+G G IG +  L ++A GA  
Sbjct: 148 PIPENIPSHLAAPLLCGGLTV-YSPLVRNGCGPGKKVGIVGLGGIGSMGTLISKAMGAET 206
Query: 209 IVIVDVDDYRLSVAKELGADNIV 231
            VI      R    K +GAD+ +
Sbjct: 207 YVISRSSRKREDAMK-MGADHYI 228

>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From Staphylococcus Haemolyticus Length = 346

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 91/213 (42%), Gaps = 44/213 (20%)
Query: 27  NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE 86
           N  K    ++P    +++LV+++++ +   D       R  D V K P V+G +  GV+E
Sbjct: 18  NLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQ----RLMD-VSKAPRVLGFDAIGVVE 72
Query: 87  KVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA 146
            VG+EV     GD V                          +  +P  +GS A   +   
Sbjct: 73  SVGNEVTMFNQGDIVY-------------------------YSGSPDQNGSNAEYQLINE 107
Query: 147 DLCFKLPDNVSLEEGAMCEPLS-----------VGLHACRRANIGPETNVLIMGAGPIGL 195
            L  K P N+S E+ A+  PL+            G+   R  N G +T ++I GAG +G 
Sbjct: 108 RLVAKAPKNISAEQ-AVSLPLTGITAYETLFDVFGISRNRNENEG-KTLLIINGAGGVGS 165
Query: 196 VTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD 228
           +    A+A+G  R++     +  +   K++GAD
Sbjct: 166 IATQIAKAYGL-RVITTASRNETIEWTKKMGAD 197

>pdb|3GOH|A Chain A, Crystal Structure Of Alcohol Dehydrogenase Superfamily Protein (np_718042.1) From Shewanella Oneidensis At 1.55 A Resolution Length = 315

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 29/180 (16%)
Query: 15  EEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEP 74
           E+  + A+    +++ +   ++P+L   D+LV+ +A+GI   D  ++K            
Sbjct: 3   EQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIK---ANPINWSNG 59
Query: 75  MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 134
            V G + AGVI KVG++V +   G RVA           H    R               
Sbjct: 60  HVPGVDGAGVIVKVGAKVDSKXLGRRVAY----------HTSLKR--------------- 94
Query: 135 HGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGAGPI 193
           HGS A   V   D    LPDN+S E  A    PL     A  +  +  +  VLI+G G +
Sbjct: 95  HGSFAEFTVLNTDRVXTLPDNLSFERAAALPCPLLTAWQAFEKIPLTKQREVLIVGFGAV 154

>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From Streptomyces Coelicolor A3(2) Length = 456

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 119/294 (40%), Gaps = 48/294 (16%)
Query: 28  TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY-----LKTL-------RCADFVVKEPM 75
           ++ +    +P LGP + LV + A  +  + VH      L T        R +D   +  +
Sbjct: 57  SIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAKRHDL 116
Query: 76  ---VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYN---LCPEMKFF 129
              VIG + AGV+ + G  V     GD V       C   +      +N   L PE + +
Sbjct: 117 PYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAH----CLSVELESSDGHNDTMLDPEQRIW 172
Query: 130 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRR------ANIGPET 183
                 G LA   +  ++     PD++S EE A   P  V   A R+      A +    
Sbjct: 173 GFETNFGGLAEIALVKSNQLMPKPDHLSWEEAAA--PGLVNSTAYRQLVSRNGAGMKQGD 230
Query: 184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST------- 235
           NVLI GA G +G      A A GA  I +V     +  + + +GA+ I+  +        
Sbjct: 231 NVLIWGASGGLGSYATQFALAGGANPICVVSSPQ-KAEICRAMGAEAIIDRNAEGYRFWK 289
Query: 236 --NLQDIAEEVEKIQKAM-----GTGIDVSFDCAGFNKTMSTALSATRAGGKVC 282
             N QD  +E ++  K +     G  ID+ F+  G  +T   ++  TR GG + 
Sbjct: 290 DENTQD-PKEWKRFGKRIRELTGGEDIDIVFEHPG-RETFGASVFVTRKGGTIT 341

>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane Protein Vat-1 Homolog-Like Protein Length = 349

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 60/268 (22%), Positives = 106/268 (39%), Gaps = 42/268 (15%)
Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
           G+N L++    +P     ++ +R+KA G+   D+   +     D   K P+V G EC+G+
Sbjct: 14  GLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQG--NIDNPPKTPLVPGFECSGI 71
Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           +E +G  VK    GDRV      + W                            A  V  
Sbjct: 72  VEALGDSVKGYEIGDRVMAFVNYNAW----------------------------AEVVCT 103
Query: 145 PADLCFKLPDNVSLEEGAM--CEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAR 202
           P +  +K+PD++S  E A      ++  +     AN+    +VL+  AG  G+   +   
Sbjct: 104 PVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGG-GVGQAVAQL 162
Query: 203 AFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI-AEEVEKIQKAMGTGIDVSFDC 261
               P + +          A     + I    T+L D  A+ V+++++    G+D+  DC
Sbjct: 163 CSTVPNVTV-------FGTASTFKHEAIKDSVTHLFDRNADYVQEVKRISAEGVDIVLDC 215
Query: 262 AGFNKTMSTALSATRAGGKVCLVGMGHL 289
              + T    LS  +  G   L G  ++
Sbjct: 216 LCGDNT-GKGLSLLKPLGTYILYGSSNM 242

>pdb|2B5W|A Chain A, Crystal Structure Of D38c Glucose Dehydrogenase Mutant From Haloferax Mediterranei Length = 357

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 58/261 (22%), Positives = 112/261 (42%), Gaps = 30/261 (11%)
Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVI----EKVGSEVKTLVPG 98
           + LVR   VG+CG+D   +          ++ +V+GHE  GV+    +    E   +VP 
Sbjct: 27  EALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGHEAVGVVVDPNDTELEEGDIVVPT 86
Query: 99  DRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV--HGSLANQVVHPADLCFKLPDNV 156
            R     G +    ++ +  + ++ P+  +F    V  HG ++     P     ++P + 
Sbjct: 87  VRRPPASGTN----EYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQ 142
Query: 157 SLEEGAMCEPLSVG------LHACRRANIGPETNVLIMGAGPIGLVT--MLGARAFGAPR 208
           + E G + EP+S+        +A R A     ++  ++G G +GL+T  ML     G   
Sbjct: 143 A-ELGFLIEPISITEKALEHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYEN 201
Query: 209 IVIV---DVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFN 265
           +  +   D  D  + + +EL A  +    T ++D+ +  E+        +D  ++  GF 
Sbjct: 202 LYCLGRRDRPDPTIDIIEELDATYVDSRQTPVEDVPDVYEQ--------MDFIYEATGFP 253
Query: 266 KTMSTALSATRAGGKVCLVGM 286
           K    ++ A    G   L+G+
Sbjct: 254 KHAIQSVQALAPNGVGALLGV 274

>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp Length = 351

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 112/275 (40%), Gaps = 45/275 (16%)
Query: 42  YDVLVRMKAVGICGSDVHYLKTLRCADFVVKE--PMVIGHECAGVIEKVGSEVKTLVPGD 99
           + VL+++ A G+   + +    +R   +  K   P   G + AGVIE VG        GD
Sbjct: 58  HQVLIKVHACGVNPVETY----IRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGD 113
Query: 100 RVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLE 159
           RV                           F +  + G  A   +      +KLP+ +  +
Sbjct: 114 RV---------------------------FTSSTISGGYAEYALAADHTVYKLPEKLDFK 146
Query: 160 EGAMCE-PLSVGLHA-CRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD 216
           +GA    P      A    A +    +VL+ GA G +GL     ARA+G   +     ++
Sbjct: 147 QGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEE 206
Query: 217 YRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG-TGIDVSFDCAGFNKTMSTALSAT 275
            +  V +  GA  +     N +++   ++KI+K +G  GID+  +    N  +S  LS  
Sbjct: 207 GQKIVLQN-GAHEVF----NHREV-NYIDKIKKYVGEKGIDIIIEMLA-NVNLSKDLSLL 259
Query: 276 RAGGKVCLVG-MGHLEMTVPLTPAAARYLIYSFLF 309
             GG+V +VG  G +E+    T A    +I   LF
Sbjct: 260 SHGGRVIVVGSRGTIEINPRDTMAKESSIIGVTLF 294

>pdb|2B5V|A Chain A, Crystal Structure Of Glucose Dehydrogenase From Haloferax Mediterranei Length = 357

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/259 (22%), Positives = 110/259 (42%), Gaps = 26/259 (10%)
Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRV- 101
           + LVR   VG+ G+D   +          ++ +V+GHE  GV+  V      L  GD V 
Sbjct: 27  EALVRTLRVGVDGTDHEVIAGGHGGFPEGEDHLVLGHEAVGVV--VDPNDTELEEGDIVV 84
Query: 102 -ALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV--HGSLANQVVHPADLCFKLPDNVSL 158
             +    +    ++ +  + ++ P+  +F    V  HG ++     P     ++P + + 
Sbjct: 85  PTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQA- 143
Query: 159 EEGAMCEPLSVG------LHACRRANIGPETNVLIMGAGPIGLVT--MLGARAFGAPRIV 210
           E G + EP+S+        +A R A     ++  ++G G +GL+T  ML     G   + 
Sbjct: 144 ELGFLIEPISITEKALEHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLY 203
Query: 211 IV---DVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKT 267
            +   D  D  + + +EL A  +    T ++D+ +  E+        +D  ++  GF K 
Sbjct: 204 CLGRRDRPDPTIDIIEELDATYVDSRQTPVEDVPDVYEQ--------MDFIYEATGFPKH 255
Query: 268 MSTALSATRAGGKVCLVGM 286
              ++ A    G   L+G+
Sbjct: 256 AIQSVQALAPNGVGALLGV 274

>pdb|2CD9|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 - Apo Form Length = 366

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 103/264 (39%), Gaps = 45/264 (17%)
Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY------LKTL-RCADFVVKEPMVI 77
           GV    +   +L S G   + +R    GICG+D         L TL +  DF     +V+
Sbjct: 12  GVQVKDVDEKKLDSYGK--IKIRTIYNGICGTDREIVNGKLTLSTLPKGKDF-----LVL 64
Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH-- 135
           GHE  GV+E+          GD V       C  C +C  GR + C E   F    +H  
Sbjct: 65  GHEAIGVVEE---SYHGFSQGDLVMPVNRRGCGICRNCLVGRPDFC-ETGEFGEAGIHKM 120
Query: 136 -GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS---------------VGLHACRRANI 179
            G +            K+P ++  + G + +PL+               V +  C    +
Sbjct: 121 DGFMREWWYDDPKYLVKIPKSIE-DIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTL 179
Query: 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQD 239
                VL++G GPIG++  L  R +G      ++V         E+    I +  TN  +
Sbjct: 180 NCR-KVLVVGTGPIGVLFTLLFRTYG------LEVWMANRREPTEVEQTVIEETKTNYYN 232
Query: 240 IAEEVEKIQKAMGTGIDVSFDCAG 263
            +   +K++ ++G   DV  D  G
Sbjct: 233 SSNGYDKLKDSVGK-FDVIIDATG 255

>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone Oxidoreductase Complexed With Nadph Length = 327

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 88/224 (39%), Gaps = 38/224 (16%)
Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVA 102
           ++ V  KA+GI   D +    L     +   P  +G E AG++ KVGS VK +  GDRV 
Sbjct: 30  EIQVENKAIGINFIDTYIRSGLYPPPSL---PSGLGTEAAGIVSKVGSGVKHIKAGDRV- 85
Query: 103 LEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA 162
                              +  +    A   VH  +       AD    LP  +S E+ A
Sbjct: 86  -------------------VYAQSALGAYSSVHNII-------ADKAAILPAAISFEQAA 119
Query: 163 --MCEPLSVGLHACRRANIGPETNVLI-MGAGPIGLVTMLGARAFGAPRIVIVDVDDYRL 219
               + L+V     +   I P+   L    AG +GL+    A+A GA  I  V       
Sbjct: 120 ASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQ 179
Query: 220 SVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 263
           S  K  GA  ++      +D+ E +++I    G  + V +D  G
Sbjct: 180 SALKA-GAWQVINYRE--EDLVERLKEI--TGGKKVRVVYDSVG 218

>pdb|2CDB|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex With Nadp And Glucose Length = 366

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 103/264 (39%), Gaps = 45/264 (17%)
Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY------LKTL-RCADFVVKEPMVI 77
           GV    +   +L S G   + +R    GICG+D         L TL +  DF     +V+
Sbjct: 12  GVQVKDVDEKKLDSYGK--IKIRTIYNGICGADREIVNGKLTLSTLPKGKDF-----LVL 64
Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH-- 135
           GHE  GV+E+          GD V       C  C +C  GR + C E   F    +H  
Sbjct: 65  GHEAIGVVEE---SYHGFSQGDLVMPVNRRGCGICRNCLVGRPDFC-ETGEFGEAGIHKM 120
Query: 136 -GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS---------------VGLHACRRANI 179
            G +            K+P ++  + G + +PL+               V +  C    +
Sbjct: 121 DGFMREWWYDDPKYLVKIPKSIE-DIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTL 179
Query: 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQD 239
                VL++G GPIG++  L  R +G      ++V         E+    I +  TN  +
Sbjct: 180 NCR-KVLVVGTGPIGVLFTLLFRTYG------LEVWMANRREPTEVEQTVIEETKTNYYN 232
Query: 240 IAEEVEKIQKAMGTGIDVSFDCAG 263
            +   +K++ ++G   DV  D  G
Sbjct: 233 SSNGYDKLKDSVGK-FDVIIDATG 255

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	321
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	1e-144
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	1e-140
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	1e-133
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	1e-129
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	1e-129
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	1e-126
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	1e-123
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	1e-109
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	1e-101
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	1e-83
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	1e-74
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	2e-66
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	2e-65
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	2e-63
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	3e-62
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	2e-55
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	1e-52
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	4e-47
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	2e-46
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	3e-46
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	4e-46
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	1e-45
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	1e-45
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	1e-45
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	4e-45
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	5e-45
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	9e-44
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	5e-40
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	9e-40
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	2e-38
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	3e-38
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	1e-33
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	3e-31
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	4e-31
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	7e-31
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	1e-30
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	3e-30
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	5e-28
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	1e-27
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	1e-27
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	2e-27
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	4e-27
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	6e-27
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	7e-27
3gms_A	340	Putative NADPH:quinone reductase; structural genom	1e-26
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	4e-26
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	1e-25
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	3e-25
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	9e-25
4eye_A	342	Probable oxidoreductase; structural genomics, niai	1e-24
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	1e-24
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	2e-24
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	5e-22
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	7e-21
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	1e-19
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	3e-19
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	4e-19
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	3e-18
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	2e-16
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	3e-14
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	4e-08
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	1e-07
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	3e-05
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	3e-05
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	6e-04

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score =  408 bits (1052), Expect = e-144
 Identities = 136/284 (47%), Positives = 189/284 (66%), Gaps = 2/284 (0%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL+RM +VGICGSDVHY +  R  +F+VK+PMV+
Sbjct: 8   NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVL 67

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G +EKVGS VK L PGDRVA+EPG      + CK GRYNL P + F ATPP  G+
Sbjct: 68  GHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGN 127

Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
           L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ GAGPIG+VT
Sbjct: 128 LCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVT 187

Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257
           +L A+A GA ++V+ D+   RLS AKE+GAD ++++S   +   E   K++  +G   +V
Sbjct: 188 LLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISK--ESPQEIARKVEGQLGCKPEV 245

Query: 258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAAR 301
           + +C G   ++   + ATR+GG + LVG+G    TVPL  AA R
Sbjct: 246 TIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIR 289

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score =  400 bits (1030), Expect = e-140
 Identities = 146/284 (51%), Positives = 193/284 (67%), Gaps = 1/284 (0%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++A L   N L+++   +P     +VL++M  VGICGSDVHY +  R ADF+VK+PMVI
Sbjct: 5   NLSAVLYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVI 64

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G + KVG  VK L  GDRVA+EPG+ C RC  CK G+YNLCP++ F ATPP  G+
Sbjct: 65  GHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGN 124

Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
           LA   VH AD C KLPDNVSLEEGA+ EPLSVG+HACRRA +   T VL++GAGPIGLV+
Sbjct: 125 LARYYVHAADFCHKLPDNVSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIGAGPIGLVS 184

Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257
           +L A+A+GA  +V       RL VAK  GAD  + V    ++ +  +E+I+ A+G   +V
Sbjct: 185 VLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNV 243

Query: 258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAAR 301
           + DC+G  K ++  ++ TR GG + LVGMG   +TVPL  A AR
Sbjct: 244 TIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAR 287

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score =  382 bits (983), Expect = e-133
 Identities = 110/297 (37%), Positives = 162/297 (54%), Gaps = 13/297 (4%)

Query: 15  EEVNMAAWLLGVNTLKIQPFEL--------PSLGPYDVLVRMKAVGICGSDVHYLKTLRC 66
            + N+  +    + L I               L   +V V +++ GICGSDVH+ K    
Sbjct: 6   SKTNIGVFTNPQHDLWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCI 65

Query: 67  ADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM 126
              +V+   V+GHE AG +  V   VK++  GDRVA+EP + C  C+ C  GRYN C  +
Sbjct: 66  GPMIVECDHVLGHESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERV 125

Query: 127 KFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVL 186
            F +TPPV G L   V HPA  C K+ + +S E GAM EPLSV L   +RA +     VL
Sbjct: 126 DFLSTPPVPGLLRRYVNHPAVWCHKIGN-MSYENGAMLEPLSVALAGLQRAGVRLGDPVL 184

Query: 187 IMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL--QDIAEEV 244
           I GAGPIGL+TML A+A GA  +VI D+D+ RL  AKE+  + +      L  ++ A+++
Sbjct: 185 ICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKI 244

Query: 245 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAAR 301
            +     G    V+ +C G   +++ A+ A + GGKV ++G+G  E+ +P   A+ R
Sbjct: 245 VES--FGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASVR 299

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score =  372 bits (957), Expect = e-129
 Identities = 84/279 (30%), Positives = 136/279 (48%), Gaps = 7/279 (2%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
            A L     L +    +P  GP ++LVR++A  ICG+D+H  K    A   ++ P+V GH
Sbjct: 4   LAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGH 63

Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLA 139
           E +GV+E VG  V+    GD V+LE  I C  C  C+ G Y++C   +        G  A
Sbjct: 64  EFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDR-DGGFA 122

Query: 140 NQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTML 199
             VV PA+  +  P ++  E  A+ EP    +H     +     +VLI GAGPIGL+  +
Sbjct: 123 EYVVVPAENAWVNPKDLPFEVAAILEPFGNAVHTVYAGSGVSGKSVLITGAGPIGLMAAM 182

Query: 200 GARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259
             RA GA  I++ D + YRL+ A+      +  +  +L      +E +++  G+G++V  
Sbjct: 183 VVRASGAGPILVSDPNPYRLAFARPYADRLVNPLEEDL------LEVVRRVTGSGVEVLL 236

Query: 260 DCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPA 298
           + +G    +   L A   GG+  ++G+    +   L   
Sbjct: 237 EFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLAGE 275

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score =  371 bits (955), Expect = e-129
 Identities = 93/297 (31%), Positives = 148/297 (49%), Gaps = 8/297 (2%)

Query: 5   GMSQGEKEDGEEVNM-AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKT 63
           G+  G +    +  M A  L  V  + ++   +P  GP D+LV+++A GICG+D H L  
Sbjct: 10  GVDLGTENLYFQSMMKAVRLESVGNISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLH- 68

Query: 64  LRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLC 123
               +F    P+ +GHE  G++ + GS V+ + PG R+  +P ISC RC  C+ GR NLC
Sbjct: 69  ---GEFPSTPPVTLGHEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLC 125

Query: 124 PEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPET 183
             ++        G  A  V+ P    F++P  +    GA CEPL+  LH    + I   +
Sbjct: 126 RNLRAIGIHR-DGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCLHGVDLSGIKAGS 184

Query: 184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEE 243
            V I+G G IGL+T+  AR  GA  +++      +  +A+E+GA   V  S    D+ E 
Sbjct: 185 TVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSA--GDVVEA 242

Query: 244 VEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAA 300
           +      +  G+DV  +CAG  +T+  +    +AGG V ++G+      V + P   
Sbjct: 243 IAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDI 299

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score =  362 bits (932), Expect = e-126
 Identities = 77/279 (27%), Positives = 129/279 (46%), Gaps = 10/279 (3%)

Query: 20  AAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG 78
           +        +++    +P +    +V V++ + G+CGSD+  +       +    P+ +G
Sbjct: 3   SVVNDTDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGAHYY----PITLG 58

Query: 79  HECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSL 138
           HE +G I+ VGS V  L PGD VA  P + C+ C  C  G Y+ C +  F  +    G  
Sbjct: 59  HEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRR-DGGF 117

Query: 139 ANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTM 198
           A  +V      F LP ++ +E+GA  EP++VGLHA   A      NV+I+GAG IGL+ +
Sbjct: 118 AEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHAFHLAQGCENKNVIIIGAGTIGLLAI 177

Query: 199 LGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 258
             A A GA  +  +D+   +L++AK  GA      S       +    +         + 
Sbjct: 178 QCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSE--MSAPQMQSVL--RELRFNQLI 233

Query: 259 FDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTP 297
            + AG  +T+  A+       ++ LVG  H ++ +    
Sbjct: 234 LETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSAT 272

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score =  355 bits (914), Expect = e-123
 Identities = 83/273 (30%), Positives = 143/273 (52%), Gaps = 6/273 (2%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
            ++   ++P  GP +VL+++ A  ICG+D+H  +    A   +K P ++GHE AG + ++
Sbjct: 17  AELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEI 76

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL 148
           G  V+ +  GD V++E  I C +C  C+ G+Y++C   K F      G  A   V PA  
Sbjct: 77  GPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGVFAEYAVVPAQN 135

Query: 149 CFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPR 208
            +K P ++  E   + EPL   +       I  ++ VLI GAGP+GL+ +  A+A GA  
Sbjct: 136 IWKNPKSIPPEYATLQEPLGNAVDTVLAGPISGKS-VLITGAGPLGLLGIAVAKASGAYP 194

Query: 209 IVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTM 268
           +++ +  D+R  +AK++GAD ++      +D+ +EV  I    G G+DV  + +G  K +
Sbjct: 195 VIVSEPSDFRRELAKKVGADYVINPFE--EDVVKEVMDI--TDGNGVDVFLEFSGAPKAL 250

Query: 269 STALSATRAGGKVCLVGMGHLEMTVPLTPAAAR 301
              L A    G+V L+G+   ++T+        
Sbjct: 251 EQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIF 283

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score =  320 bits (823), Expect = e-109
 Identities = 60/300 (20%), Positives = 116/300 (38%), Gaps = 26/300 (8%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
            A   G +   +     P     + LVR   VG+CG+D   +          ++ +V+GH
Sbjct: 4   IAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGH 63

Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPG--ISCWRCDHCKGGRYNLCPEMKFFATPPV--H 135
           E  GV+  V      L  GD V        +    ++ +  + ++ P+  +F    V  H
Sbjct: 64  EAVGVV--VDPNDTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAH 121

Query: 136 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANI------GPETNVLIMG 189
           G ++     P     ++P + + E G + EP+S+   A   A           ++  ++G
Sbjct: 122 GYMSEFFTSPEKYLVRIPRSQA-ELGFLIEPISITEKALEHAYASRSAFDWDPSSAFVLG 180

Query: 190 AGPIGLVTMLGARAF--GAPRIVIV---DVDDYRLSVAKELGADNIVKVSTNLQDIAEEV 244
            G +GL+T+   +    G   +  +   D  D  + + +EL A  +    T ++D+ +  
Sbjct: 181 NGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVEDVPDVY 240

Query: 245 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLI 304
           E         +D  ++  GF K    ++ A    G   L+G+           A  R ++
Sbjct: 241 E--------QMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMV 292

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score =  301 bits (774), Expect = e-101
 Identities = 77/319 (24%), Positives = 139/319 (43%), Gaps = 29/319 (9%)

Query: 3   KGGMSQGEKE-DGEEVNMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHY 60
           +     G K+ +G+   + + +     ++++    P +  P ++++++KA GICGSDVH 
Sbjct: 15  RPEFKLGPKDIEGKLTWLGSKVWRYPEVRVEEVPEPRIEKPTEIIIKVKACGICGSDVHM 74

Query: 61  LKTLRCADFVV----KEPMVIGHECAGVIEKVGSEV------KTLVPGDRVALEPGISCW 110
            +T      +       P+ +GHE +GV+ + G E       K    G+ V  E  + C 
Sbjct: 75  AQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCG 134

Query: 111 RCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD-------NVSLEEGAM 163
            C  C  G  N C  +       V G+ A  V   A   + L +       +     G++
Sbjct: 135 HCRPCAEGFPNHCENLNELGFN-VDGAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSL 193

Query: 164 CEPLSVGLHAC--RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV 221
            EP SV  +A   R   I P  NV+I+G GPIGL  +   +  GA ++++ +  + R ++
Sbjct: 194 VEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNL 253

Query: 222 AKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRA---G 278
           AKELGAD+++  +   ++  E V       G G  +  +  G  + +   +        G
Sbjct: 254 AKELGADHVIDPTK--ENFVEAVLDY--TNGLGAKLFLEATGVPQLVWPQIEEVIWRARG 309

Query: 279 GKVCLVGMGHLEMTVPLTP 297
               +  +   +  +PLT 
Sbjct: 310 INATVAIVARADAKIPLTG 328

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score =  255 bits (654), Expect = 1e-83
 Identities = 55/297 (18%), Positives = 106/297 (35%), Gaps = 32/297 (10%)

Query: 29  LKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLK--TLRCADFVVKEPMVIGHECAGVI 85
           ++++  +   L     + +R    GICG+D   +            K+ +V+GHE  GV+
Sbjct: 13  VQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEAIGVV 72

Query: 86  EKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQVV 143
           E+          GD V       C  C +C  GR + C   +F       + G +     
Sbjct: 73  EESYHGFS---QGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWY 129

Query: 144 HPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA--------------NIGPETNVLIMG 189
                  K+P ++  + G + +PL+    +                         VL++G
Sbjct: 130 DDPKYLVKIPKSIE-DIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVG 188

Query: 190 AGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQK 249
            GPIG++  L  R +G    +    +   +               TN  + +   +K++ 
Sbjct: 189 TGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETK------TNYYNSSNGYDKLKD 242

Query: 250 AMGTGIDVSFDCAGFNKT-MSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIY 305
           ++G   DV  D  G +   +   +      G + L G      +VPL     + +++
Sbjct: 243 SVG-KFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFST-SGSVPLDYKTLQEIVH 297

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score =  233 bits (596), Expect = 1e-74
 Identities = 76/290 (26%), Positives = 127/290 (43%), Gaps = 22/290 (7%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L  + FE+  +    +LV + + G+CGSDVH  +     D  V  P+++GHE AG + +V
Sbjct: 30  LVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRG---EDPRVPLPIILGHEGAGRVVEV 86

Query: 89  GSEVK-----TLVPGDRVALEPGISCWRCDHCK-GGRYNLCPEMKFFATP-------PVH 135
             E +      L PGD +    GI+C  C  CK      LCP  K +           + 
Sbjct: 87  NGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLR 146

Query: 136 GSLANQ-VVHPADLCFKLPDNVSLEEGAMCEP-LSVGLHACRR-ANIGPETNVLIMGAGP 192
           G  ++  V+ P     K+ +   L+  AM     +   HA            V+I GAGP
Sbjct: 147 GCYSSHIVLDPETDVLKVSEKDDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGP 206

Query: 193 IGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAM 251
           +GL  ++ AR+ GA  ++++     RL +A+E+GAD  +    T++++  + +  I    
Sbjct: 207 LGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDI--TH 264

Query: 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAAR 301
           G G D   +  G ++ +       R GG   + G+   +  VP       
Sbjct: 265 GRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWL 314

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score =  211 bits (539), Expect = 2e-66
 Identities = 78/281 (27%), Positives = 120/281 (42%), Gaps = 12/281 (4%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
              +L +  +     E P+ GP+D +VR  AV  C SD+H +          +  M++GH
Sbjct: 3   GFAMLSIGKVGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIG---ERHNMILGH 59

Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGS 137
           E  G + +VGSEVK   PGDRV +      WR    + G +     M      +    G 
Sbjct: 60  EAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGV 119

Query: 138 LANQV-VHPADL-CFKLPDNVSLEEGAMC-EPLSVGLHACRRANIGPETNVLIMGAGPIG 194
                 V+ AD+    LP  + LE   M  + ++ G H    ANI     V ++G GP+G
Sbjct: 120 FGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELANIKLGDTVCVIGIGPVG 179

Query: 195 LVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTG 254
           L+++ GA   GA RI  V    +   +A E GA +I+       DI E++ K     G G
Sbjct: 180 LMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKN--GDIVEQILKATD--GKG 235

Query: 255 IDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPL 295
           +D      G   T + A+   + G  +  V        + +
Sbjct: 236 VDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDI 276

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  208 bits (532), Expect = 2e-65
 Identities = 82/277 (29%), Positives = 129/277 (46%), Gaps = 18/277 (6%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVH-----YLKTLRCADFVVKEPMVIGHECAG 83
           L +Q   +P      VL++++A G+C SDVH     +       D  VK P+ +GHE AG
Sbjct: 13  LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72

Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
            IE+VG EV     GD VA+ P      C +C+ G  +LC   ++       G+ A  V+
Sbjct: 73  KIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVI 131

Query: 144 HPADLCFKLPDNVSLEEGAMCEPLS-VGL---HACRRANIGPETNVLIMGA-GPIGLVTM 198
            P          ++  E A   PL+  G+    A R+A++ P   +L++GA G +G + +
Sbjct: 132 VPHYKYMYKLRRLNAVEAA---PLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAV 188

Query: 199 LGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 258
             A+A     I+ VDV +  +  AK  GAD ++  S   QD   E+ +I +    G+D  
Sbjct: 189 QIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASM--QDPLAEIRRITE--SKGVDAV 244

Query: 259 FDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPL 295
            D     KT+S    A    GK  +VG+   ++    
Sbjct: 245 IDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHA 281

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score =  203 bits (518), Expect = 2e-63
 Identities = 72/275 (26%), Positives = 118/275 (42%), Gaps = 15/275 (5%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             +     P+ GP ++L+++ A G+C SD+  +     A +    P+ +GHE  G + ++
Sbjct: 13  PVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPA-AQYAYGLPLTLGHEGVGTVAEL 71

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPP----VHGSLANQVVH 144
           G  V     GD VA+     C  C  C  GR N C         P      GS+A  ++ 
Sbjct: 72  GEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIV 131

Query: 145 PADLCFKLPDNVSLEEGA--MCEPLSVGLHACRR--ANIGPETNVLIMGAGPIGLVTMLG 200
            +        ++     A      L+   HA  R    +GP +  +++G G +G V +  
Sbjct: 132 DSARHLVPIGDLDPVAAAPLTDAGLTPY-HAISRVLPLLGPGSTAVVIGVGGLGHVGIQI 190

Query: 201 ARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260
            RA  A R++ VD+DD RL++A+E+GAD  VK        A+ + ++    G G    FD
Sbjct: 191 LRAVSAARVIAVDLDDDRLALAREVGADAAVKSGA---GAADAIRELTG--GQGATAVFD 245

Query: 261 CAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPL 295
             G   T+ TA       G + +VG+         
Sbjct: 246 FVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVG 280

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score =  200 bits (512), Expect = 3e-62
 Identities = 75/274 (27%), Positives = 133/274 (48%), Gaps = 14/274 (5%)

Query: 29  LKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK 87
           L+I+  + P L G +DV+VR+   G+C +D+H ++ +       K P  +GHE  G IE+
Sbjct: 28  LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEE 87

Query: 88  VGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD 147
           V   V+ L  GD V L P ++   C  C+ G    C  ++F     + G  A  +     
Sbjct: 88  VAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGL-NIDGGFAEFMRTSHR 146

Query: 148 LCFKLPDNVSLEEGAMCEPLS-VGL---HACRRA--NIGPETNVLIMGAGPIGLVTMLGA 201
              KLP ++S E+     PL+  G+    A ++A   + P   V I+G G +G + +   
Sbjct: 147 SVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLL 206

Query: 202 RAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 261
           +      ++ +DV + +L +A+ LGAD++V      +D  ++V ++ +  G G++V+ D 
Sbjct: 207 KVMTPATVIALDVKEEKLKLAERLGADHVVDAR---RDPVKQVMELTR--GRGVNVAMDF 261

Query: 262 AGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPL 295
            G   T+          G++ +VG G  E+  P 
Sbjct: 262 VGSQATVDYTPYLLGRMGRLIIVGYGG-ELRFPT 294

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score =  182 bits (465), Expect = 2e-55
 Identities = 65/276 (23%), Positives = 117/276 (42%), Gaps = 21/276 (7%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+   +P     +VL+R+   G+C +D+   K +  A    + P+++GHE AG I +V
Sbjct: 16  LSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVE-AKQGFRLPIILGHENAGTIVEV 74

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL 148
           G E+  +  GD V +        C +C+ G++N+C           +G  +  ++  +  
Sbjct: 75  G-ELAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQ-TTNGGFSEYMLVKSSR 132

Query: 149 CFKLPDNVSLEEGAMCEPLSV-GL---HACRRA----NIGPETNVLIMGAGPIGLVTMLG 200
                +++S  E A   PL+  G     A R+A    +   E  V++ G G + + T+  
Sbjct: 133 WLVKLNSLSPVEAA---PLADAGTTSMGAIRQALPFISKFAEPVVIVNGIGGLAVYTIQI 189

Query: 201 ARAFGA-PRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259
            +A      IV +         A ELGAD +      ++D    + K+    G G  ++ 
Sbjct: 190 LKALMKNITIVGISRSKKHRDFALELGADYVS----EMKDAESLINKLTD--GLGASIAI 243

Query: 260 DCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPL 295
           D  G  +T           G + LVGM    +++  
Sbjct: 244 DLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEA 279

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score =  176 bits (448), Expect = 1e-52
 Identities = 72/305 (23%), Positives = 121/305 (39%), Gaps = 58/305 (19%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
            ++Q  ++      +VLV++ A G+C +D+               P V+GHE +G+IE +
Sbjct: 19  FELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVPL----PAVLGHEGSGIIEAI 74

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK--------------------- 127
           G  V  L  GD V L  G  C +C  C  G    C E                       
Sbjct: 75  GPNVTELQVGDHVVLSYG-YCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQG 133

Query: 128 -----FFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHAC-------- 174
                FFA      S A   +   +   K+  +V +E         +G   C        
Sbjct: 134 VVNDHFFAQ----SSFATYALSRENNTVKVTKDVPIEL--------LGPLGCGIQTGAGA 181

Query: 175 --RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVK 232
                 + P ++ +  GAG +GL  +L A+  GA  I+ VD+ + RL +AK+LGA +++ 
Sbjct: 182 CINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVI- 240

Query: 233 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMT 292
              N +   + V  I++    G++ + +  G  + +   + A    GK+ +VG   L  T
Sbjct: 241 ---NSKT-QDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTT 296

Query: 293 VPLTP 297
                
Sbjct: 297 AQFDV 301

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score =  160 bits (408), Expect = 4e-47
 Identities = 84/278 (30%), Positives = 124/278 (44%), Gaps = 32/278 (11%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF--VVKEPMVIGHECAGVIE 86
           L I    +P  GP  V V+++A G+C +D+H        D+      P + GHE  G + 
Sbjct: 15  LTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAAD----GDWPVKPTLPFIPGHEGVGYVS 70

Query: 87  KVGSEVKTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQ 141
            VGS V  +  GDRV    G+     +C  C+HC  G   LC + +      V+G     
Sbjct: 71  AVGSGVSRVKEGDRV----GVPWLYSACGYCEHCLQGWETLCEKQQ-NTGYSVNGGYGEY 125

Query: 142 VVHPADLCFKLPDNVSLEEGA--MCEPLSVGL---HACRRANIGPETNVLIMGAGPIGLV 196
           VV   +    LPD V   E A  +C     G+      +  +  P   V+I G G +G V
Sbjct: 126 VVADPNYVGLLPDKVGFVEIAPILC----AGVTVYKGLKVTDTRPGQWVVISGIGGLGHV 181

Query: 197 TMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 256
            +  ARA G  R+  VD+DD +L++A+ LGA+  V  + +  D A     +QK +G G  
Sbjct: 182 AVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVAV-NARD-TDPAAW---LQKEIG-GAH 234

Query: 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVP 294
                A   K  S A+   R GG + L G+   +   P
Sbjct: 235 GVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTP 272

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398

 Score =  160 bits (407), Expect = 2e-46
 Identities = 68/276 (24%), Positives = 117/276 (42%), Gaps = 39/276 (14%)

Query: 41  PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDR 100
            + V++++ +  ICGSD H ++         +  +V+GHE  G + + G +V+ L  GD 
Sbjct: 33  EHGVILKVVSTNICGSDQHMVR----GRTTAQVGLVLGHEITGEVIEKGRDVENLQIGDL 88

Query: 101 VALEPGISCWRCDHCKGGRYNLCPEMK---------FFATPPVHGSLANQVVHP-ADL-C 149
           V++   ++C RC  CK     +C  +          +       G  A  V+ P AD   
Sbjct: 89  VSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNL 148

Query: 150 FKLPDNVSLEEG-----AMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAF 204
            KLPD     E       + + L  G H    A +GP + V + GAGP+GL     AR  
Sbjct: 149 LKLPDRDKAMEKIRDLTCLSDILPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAAASARLL 208

Query: 205 GAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGF 264
           GA  +++ D++  RL+ AK  G +      +    + E++  +       +D + D  GF
Sbjct: 209 GAAVVIVGDLNPARLAHAKAQGFEIA--DLSLDTPLHEQIAALLG--EPEVDCAVDAVGF 264

Query: 265 ---------------NKTMSTALSATRAGGKVCLVG 285
                             +++ +  TR  GK+ + G
Sbjct: 265 EARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score =  159 bits (404), Expect = 3e-46
 Identities = 76/292 (26%), Positives = 122/292 (41%), Gaps = 31/292 (10%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L ++   +     ++V +++ A GICGSD   LK         K P+++GHE  GV+E +
Sbjct: 22  LSLETITVAPPKAHEVRIKILASGICGSDSSVLK----EIIPSKFPVILGHEAVGVVESI 77

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------P 133
           G+ V  + PGD+V       C  C  CK    N C +    A                 P
Sbjct: 78  GAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKP 137

Query: 134 VH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHAC-RRANIGPETNVLI 187
           ++      +     V       K+     LE   +    + G  A    A + P +   +
Sbjct: 138 IYNLMGTSTFTEYTVVADIAVAKIDPKAPLESCLIGCGFATGYGAAVNTAKVTPGSTCAV 197

Query: 188 MGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEV-EK 246
            G G +G   ++G +A GA RI+ V     +   A ELGA   +    N +D  + + E 
Sbjct: 198 FGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECL----NPKDYDKPIYEV 253

Query: 247 IQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHLEMTVPLTP 297
           I +    G+D + +CAG  +TM  AL +T  G G   ++G+      +PL P
Sbjct: 254 ICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDP 305

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score =  159 bits (404), Expect = 4e-46
 Identities = 77/297 (25%), Positives = 128/297 (43%), Gaps = 42/297 (14%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+  E+      +V +++ A  +C +D++              P+V+GHECAG++E V
Sbjct: 21  LCIEEIEVSPPKACEVRIQVIATCVCPTDINATD----PKKKALFPVVLGHECAGIVESV 76

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V    PGD+V       C RC  C     NLC +++ F  P                
Sbjct: 77  GPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTC 136

Query: 133 ---PVH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLH-----ACRRANI 179
               ++      S +   V       ++ D  +LE       +  G       A   A +
Sbjct: 137 KGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVC---LIGCGFSSGYGAAINTAKV 193

Query: 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQD 239
            P +   + G G +GL  ++G +  GA RI+ +D++  +   AK LGA + +    N ++
Sbjct: 194 TPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCL----NPRE 249

Query: 240 IAEEV-EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHLEMTVP 294
           + + V + I +    G+D S DCAG  +T+  A+  T  G G   +VG    EMT+P
Sbjct: 250 LDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIP 306

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score =  158 bits (401), Expect = 1e-45
 Identities = 77/304 (25%), Positives = 127/304 (41%), Gaps = 34/304 (11%)

Query: 20  AAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG 78
           AA        L I+  E+     ++V +++ A  +C +D +   TL  AD     P+++G
Sbjct: 9   AAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPEGCFPVILG 65

Query: 79  HECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP------ 132
           H  AG++E VG  V  L  GD V       C  C  C   + NLC +++           
Sbjct: 66  HLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDG 125

Query: 133 ---------PVH-----GSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHAC-R 175
                     +       + +   V       K+     L++  +  C  +S G  A   
Sbjct: 126 TSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCG-ISTGYGAAVN 184

Query: 176 RANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST 235
            A + P +   + G G +GL  ++G +  GA RI+ VD++  + + AKE GA   +    
Sbjct: 185 TAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI---- 240

Query: 236 NLQDIAEEV-EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHLEMTV 293
           N QD ++ + E + +    G+D SF+C G  K M  AL A   G G   +VG+      +
Sbjct: 241 NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEI 300

Query: 294 PLTP 297
              P
Sbjct: 301 ATRP 304

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398

 Score =  158 bits (402), Expect = 1e-45
 Identities = 73/277 (26%), Positives = 121/277 (43%), Gaps = 41/277 (14%)

Query: 41  PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDR 100
            + V++++ +  ICGSD H  +      F+V +  V+GHE  G + + GS+V+ +  GD 
Sbjct: 32  EHAVILKVVSTNICGSDQHIYR----GRFIVPKGHVLGHEITGEVVEKGSDVELMDIGDL 87

Query: 101 VALEPGISCWRCDHCKGGRYNLCPEMKF----------FATPPVHGSLANQV-VHPADL- 148
           V++   ++C RC +CK  R ++C               F      G  A  V V  AD  
Sbjct: 88  VSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYM 147

Query: 149 CFKLPDNVSLEEG-----AMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARA 203
             K  D     E       + + L  G H C  A + P ++V I GAGP+G     GAR 
Sbjct: 148 LLKFGDKEQAMEKIKDLTLISDILPTGFHGCVSAGVKPGSHVYIAGAGPVGRCAAAGARL 207

Query: 204 FGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM-GTGIDVSFDCA 262
            GA  +++ D +  RL +  + G + I     +L++ A   ++I + +    +D   D  
Sbjct: 208 LGAACVIVGDQNPERLKLLSDAGFETI-----DLRNSAPLRDQIDQILGKPEVDCGVDAV 262

Query: 263 GF--------------NKTMSTALSATRAGGKVCLVG 285
           GF              N  +++     RAGG + + G
Sbjct: 263 GFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG 299

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score =  156 bits (398), Expect = 1e-45
 Identities = 96/278 (34%), Positives = 138/278 (49%), Gaps = 32/278 (11%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF--VVKEPMVIGHECAGVIE 86
           LKI+  E P++   +VLVR+KA G+C +D+H        D+    K P++ GHE  G++E
Sbjct: 13  LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAH----GDWPVKPKLPLIPGHEGVGIVE 68

Query: 87  KVGSEVKTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQ 141
           +VG  V  L  GDRV    GI     +C  CD+C  G+  LC   K  A   V G  A  
Sbjct: 69  EVGPGVTHLKVGDRV----GIPWLYSACGHCDYCLSGQETLCEHQK-NAGYSVDGGYAEY 123

Query: 142 VVHPADLCFKLPDNVSLEEGA--MCEPLSVGL---HACRRANIGPETNVLIMGAGPIGLV 196
               AD   K+PDN+S EE A   C     G+    A +     P   V I G G +G V
Sbjct: 124 CRAAADYVVKIPDNLSFEEAAPIFC----AGVTTYKALKVTGAKPGEWVAIYGIGGLGHV 179

Query: 197 TMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 256
            +  A+A G   +V VD+ D +L +AKELGAD +V      +D A+    +++ +G G+ 
Sbjct: 180 AVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVV-NPLK-EDAAKF---MKEKVG-GVH 232

Query: 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVP 294
            +   A       +A ++ R GG   LVG+   EM +P
Sbjct: 233 AAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIP 270

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score =  156 bits (396), Expect = 4e-45
 Identities = 70/279 (25%), Positives = 111/279 (39%), Gaps = 47/279 (16%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF--VVKEPMVIGHECAGVIE 86
           L+ +   +P     ++L+ +K  G+C +D+H        D+   VK P+V GHE AGV+ 
Sbjct: 18  LEYKDIPVPKPKANELLINVKYSGVCHTDLHAWH----GDWPLPVKLPLVGGHEGAGVVV 73

Query: 87  KVGSEVKTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQ 141
            +G  VK    GD      GI     SC  C++C+ G  + CP     +     GS    
Sbjct: 74  GMGENVKGWKIGDYA----GIKWLNGSCMACEYCELGNESNCPHAD-LSGYTHDGSFQQY 128

Query: 142 VVHPADLCFKLPDNVSLEEGA--MC------EPLSVGLHACRRANIGPETNVLIMGAGPI 193
               A     +P    L + A  +C      + L       + AN+     V I GA   
Sbjct: 129 ATADAVQAAHIPQGTDLAQVAPILCAGITVYKAL-------KSANLMAGHWVAISGAAG- 180

Query: 194 GLVTMLG------ARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKI 247
           G    LG      A+A G  R++ +D  + +  + + +G +  +   T  +DI   V   
Sbjct: 181 G----LGSLAVQYAKAMGY-RVLGIDGGEGKEELFRSIGGEVFI-DFTKEKDIVGAV--- 231

Query: 248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 286
            KA   G     + +     +  +    RA G   LVGM
Sbjct: 232 LKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGM 270

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score =  156 bits (396), Expect = 5e-45
 Identities = 82/304 (26%), Positives = 130/304 (42%), Gaps = 35/304 (11%)

Query: 20  AAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG 78
           AA L        I+  E+     ++V ++M A GIC SD H +        V   P++ G
Sbjct: 11  AAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAG 66

Query: 79  HECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP------ 132
           HE AG++E +G  V T+ PGD+V       C +C  CK    N C +             
Sbjct: 67  HEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDG 126

Query: 133 ---------PVH-----GSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHAC-R 175
                    P+H      + +   V       K+     LE+  +  C   S G  +  +
Sbjct: 127 TSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCG-FSTGYGSAVK 185

Query: 176 RANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST 235
            A +   +   + G G +GL  ++G +A GA RI+ VD++  + + AKE+GA   V    
Sbjct: 186 VAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV---- 241

Query: 236 NLQDIAEEV-EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHLEMTV 293
           N QD  + + E + +    G+D SF+  G   TM TALS  +   G   +VG+      +
Sbjct: 242 NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNL 301

Query: 294 PLTP 297
            + P
Sbjct: 302 SMNP 305

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score =  153 bits (388), Expect = 9e-44
 Identities = 74/295 (25%), Positives = 121/295 (41%), Gaps = 34/295 (11%)

Query: 20  AAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG 78
           AA     N  L I+  E+      ++ +++ A G+C +D++    L         P+V+G
Sbjct: 11  AAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLY---HLFEGKHKDGFPVVLG 67

Query: 79  HECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP------ 132
           HE AG++E VG  V    PG++V       C  C  C+  + N C +     +P      
Sbjct: 68  HEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPK 127

Query: 133 ---------PVH-----GSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHAC-R 175
                     V       + +   V       K+  +  L+   +  C  +S G  A   
Sbjct: 128 ETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCG-VSTGFGAAVN 186

Query: 176 RANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST 235
            A + P +   + G G +GL  ++G  + GA RI+ VD++  +   AK  GA + V    
Sbjct: 187 TAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFV---- 242

Query: 236 NLQDIAEEV-EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGH 288
           N  D +E + + + K    G+D S +C G    M  AL +   G G   LVG   
Sbjct: 243 NPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTD 297

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  142 bits (360), Expect = 5e-40
 Identities = 86/277 (31%), Positives = 126/277 (45%), Gaps = 20/277 (7%)

Query: 19  MAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEP 74
           M A ++    G   L++    +P  GP +V VR+KA  +   DV   K +      +  P
Sbjct: 1   MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPK--LPLP 58

Query: 75  MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 134
            V+G + +GV++ VG  V+   PGD V + PG+SC RC+ C  G  NLCP  +       
Sbjct: 59  HVLGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHR- 117

Query: 135 HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGL---HA-CRRANIGPETNVLIMGA 190
           HG+ A  VV P       P N+S EE A   PL   L        +  + P  +VL+M A
Sbjct: 118 HGTYAEYVVLPEANLAPKPKNLSFEEAA-AIPL-TFLTAWQMVVDKLGVRPGDDVLVMAA 175

Query: 191 -GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQK 249
              + +  +  A+ FGA  I     +D +L  AK LGAD  V  +    D  +EV ++  
Sbjct: 176 GSGVSVAAIQIAKLFGARVIATAGSED-KLRRAKALGADETVNYTH--PDWPKEVRRLTG 232

Query: 250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 286
             G G D   D  G        + AT  GG++ + G 
Sbjct: 233 --GKGADKVVDHTG-ALYFEGVIKATANGGRIAIAGA 266

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score =  144 bits (364), Expect = 9e-40
 Identities = 63/295 (21%), Positives = 106/295 (35%), Gaps = 38/295 (12%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE----------- 73
              +L++    +P L P +VLV + A  I  + V          F   +           
Sbjct: 46  VRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWATR 105

Query: 74  ----PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 129
                 V+G +C+GV+ + G  V+   PGD V + P       +    G   L  E + +
Sbjct: 106 HDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAH-VDEQEPATHGDGMLGTEQRAW 164

Query: 130 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG-----LHACRRANIGPETN 184
                 G LA   V  A      P +++ EE A   PL  G     L + R A +     
Sbjct: 165 GFETNFGGLAEYGVVRASQLLPKPAHLTWEEAA-VSPLCAGTAYRMLVSDRGAQMKQGDI 223

Query: 185 VLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV------------ 231
           VLI GA G +G   +   +  G   + +V     + +  + LG D ++            
Sbjct: 224 VLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQ-KEAAVRALGCDLVINRAELGITDDIA 282

Query: 232 -KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG 285
                 ++   +  + + +  G   D+ F+  G   T   ++   R GG V   G
Sbjct: 283 DDPRRVVETGRKLAKLVVEKAGREPDIVFEHTG-RVTFGLSVIVARRGGTVVTCG 336

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score =  140 bits (355), Expect = 2e-38
 Identities = 68/314 (21%), Positives = 112/314 (35%), Gaps = 49/314 (15%)

Query: 14  GEEVNMAAWLL-----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV---------- 58
            +E  M A L         ++ +    +P LGP + LV + A  +  + V          
Sbjct: 38  KDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLST 97

Query: 59  --HYLKTLRCADFVVKEPM---VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCD 113
                +  R +D   +  +   VIG + AGV+ + G  V     GD V      S     
Sbjct: 98  FGFLERYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCL-SVELES 156

Query: 114 HCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG--- 170
                   L PE + +      G LA   +  ++     PD++S EE A    L      
Sbjct: 157 SDGHNDTMLDPEQRIWGFETNFGGLAEIALVKSNQLMPKPDHLSWEEAA-APGLVNSTAY 215

Query: 171 --LHACRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV-DDYRLSVAKELG 226
             L +   A +    NVLI GA G +G      A A GA    I  V    +  + + +G
Sbjct: 216 RQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGA--NPICVVSSPQKAEICRAMG 273

Query: 227 ADNIV---------------KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTA 271
           A+ I+               +     +   + + ++    G  ID+ F+  G  +T   +
Sbjct: 274 AEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTG--GEDIDIVFEHPG-RETFGAS 330

Query: 272 LSATRAGGKVCLVG 285
           +  TR GG +    
Sbjct: 331 VFVTRKGGTITTCA 344

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score =  138 bits (349), Expect = 3e-38
 Identities = 68/296 (22%), Positives = 109/296 (36%), Gaps = 32/296 (10%)

Query: 19  MAAWLL---GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADFV 70
           M  W       + LK+    +P  G +D++VR  AV +   D                  
Sbjct: 28  MQEWSTETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGM-------GLD 80

Query: 71  VKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA 130
           +  P V   + +GV+E VG  V    PGDRV                GR           
Sbjct: 81  LAFPFVPASDMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGR----TPAYETL 136

Query: 131 TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGL---HA-CRRANIGPETNVL 186
                G L+  VV P       P ++   E +   P   GL    A   + ++     V+
Sbjct: 137 GGAHPGVLSEYVVLPEGWFVAAPKSLDAAEAS-TLPC-AGLTAWFALVEKGHLRAGDRVV 194

Query: 187 IMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEK 246
           + G G + L  +  A+A GA  IV     + +L  A  LGAD+ +      +D  E V  
Sbjct: 195 VQGTGGVALFGLQIAKATGAEVIVTSSSRE-KLDRAFALGADHGINRLE--EDWVERVYA 251

Query: 247 IQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG-MGHLEMTVPLTPAAAR 301
           +      G D   + AG    +  +L A    G++ ++G +   E++ P+ P   +
Sbjct: 252 LTG--DRGADHILEIAG-GAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLK 304

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score =  125 bits (317), Expect = 1e-33
 Identities = 72/295 (24%), Positives = 118/295 (40%), Gaps = 45/295 (15%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
                K   ++      +D+ ++++A G+CGSD+H           +K P+V+GHE  G 
Sbjct: 17  DWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIH---CAAGHWGNMKMPLVVGHEIVGK 73

Query: 85  IEKVGSEVKTLV-PGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKF-FATPPVHGS 137
           + K+G +  + +  G RV    G+     SC  CD CK      C +    ++ P   G 
Sbjct: 74  VVKLGPKSNSGLKVGQRV----GVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGY 129

Query: 138 L-----ANQVVHPADLCFKLPDNVSLEEGA--MC------EPLSVGLHACRRANIGPETN 184
           +     AN V         +P+N+     A  +C       PL        R   GP   
Sbjct: 130 VSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPL-------VRNGCGPGKK 182

Query: 185 VLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEV 244
           V I+G G IG +  L ++A GA   VI      R   A ++GAD+ +  +       EE 
Sbjct: 183 VGIVGLGGIGSMGTLISKAMGAETYVISRSSRKR-EDAMKMGADHYI-ATL------EEG 234

Query: 245 EKIQKAMGTGIDVSFDCAGFNKTMSTA--LSATRAGGKVCLVGMGHLEMTVPLTP 297
           +  +K   T  D+   CA     +       A + GG++  + +      + L P
Sbjct: 235 DWGEKYFDT-FDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKP 288

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score =  119 bits (301), Expect = 3e-31
 Identities = 75/289 (25%), Positives = 123/289 (42%), Gaps = 43/289 (14%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L    F   + G  DV  ++   G+C SD+H   +++        P+V GHE  G + +V
Sbjct: 29  LSPFNFSRRATGEEDVRFKVLYCGVCHSDLH---SIKNDWGFSMYPLVPGHEIVGEVTEV 85

Query: 89  GSEVKTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEM------KFFATPPVHGS 137
           GS+VK +  GD+V    G+     +C  C+ C     N CP+M       +      +G 
Sbjct: 86  GSKVKKVNVGDKV----GVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGG 141

Query: 138 LANQVVHPADLCFKLPDNVSLEEGA--MC------EPLSVGLHACRRANIG-PETNVLIM 188
            +N +V       + PDN+ L+ GA  +C       PL       +   +  P  ++ I+
Sbjct: 142 YSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPL-------KYFGLDEPGKHIGIV 194

Query: 189 GAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQ 248
           G G +G V +  A+AFG+   VI      +    K  GAD+ + VS +        E++Q
Sbjct: 195 GLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFL-VSRD-------QEQMQ 246

Query: 249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTP 297
            A GT +D   D       +       ++ GK+ LVG     + +P   
Sbjct: 247 AAAGT-LDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFS 294

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score =  118 bits (299), Expect = 4e-31
 Identities = 67/292 (22%), Positives = 108/292 (36%), Gaps = 50/292 (17%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
            K   F   ++GP DVL+ +   GIC SD+H   +          PM+ GHE AG+I++V
Sbjct: 17  FKPHDFSRHAVGPRDVLIDILYAGICHSDIH---SAYSEWKEGIYPMIPGHEIAGIIKEV 73

Query: 89  GSEVKTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEM--------KFFATPPVH 135
           G  VK    GD V    G+     SC  C  CK  +   C ++         F    P  
Sbjct: 74  GKGVKKFKIGDVV----GVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHM 129

Query: 136 GSLANQVVHPADLCFKLPDNVSLEEGA--MC------EPLSVGLHACRRANIGPETNVLI 187
           G  +N +V   +    +  N  LE+ A  +C       PL       + + +   T V +
Sbjct: 130 GGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPL-------KFSKVTKGTKVGV 182

Query: 188 MGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKI 247
            G G +G + +  A A GA   V    +  +   A  +G  +                  
Sbjct: 183 AGFGGLGSMAVKYAVAMGAEVSVFARNEHKK-QDALSMGVKHFY-TDP------------ 228

Query: 248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAA 299
           ++     +D        +  +   L      G + LVG+  +E+   L+   
Sbjct: 229 KQCKEE-LDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFD 279

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score =  117 bits (296), Expect = 7e-31
 Identities = 72/298 (24%), Positives = 126/298 (42%), Gaps = 45/298 (15%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
           G +    +  ++ S GP  V +R  A+G+   D ++   +     V + P+V+G E A V
Sbjct: 12  GPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAV 71

Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           +E+VG  V     G+RV                              PP+ G+ + + ++
Sbjct: 72  VEEVGPGVTDFTVGERVC--------------------------TCLPPL-GAYSQERLY 104

Query: 145 PADLCFKLPDNVSLEEGAMCEPLSVGLHAC----RRANIGPETNVLIM-GAGPIGLVTML 199
           PA+   K+P ++ L++  +   +  G+ A     +   + P   VLI   AG +G + + 
Sbjct: 105 PAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVP 164

Query: 200 GARAFGAPRIVIVDV-DDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 258
            AR  GA   VI  V  + +   A++LG  + +  ST  QD AE V +I    G G+DV 
Sbjct: 165 WARHLGA--TVIGTVSTEEKAETARKLGCHHTINYST--QDFAEVVREITG--GKGVDVV 218

Query: 259 FDCAGFNKTMSTALSATRAGGKVCLVGM-----GHLEMTVPLTPAAARYLIYSFLFHF 311
           +D  G   T+  +L   R  G     G        + +   L    + ++    L+H+
Sbjct: 219 YDSIG-KDTLQKSLDCLRPRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWHY 275

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score =  117 bits (296), Expect = 1e-30
 Identities = 67/273 (24%), Positives = 111/273 (40%), Gaps = 43/273 (15%)

Query: 34  FELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK 93
           + L   GP DV +R+   GIC +D+H     +    +   PMV GHE  G + +VGS+V 
Sbjct: 27  YTLRETGPEDVNIRIICCGICHTDLH---QTKNDLGMSNYPMVPGHEVVGEVVEVGSDVS 83

Query: 94  TLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEM------KFFATPPVHGSLANQV 142
               GD V    G+      C  C  C+      CP+        +    P  G  A   
Sbjct: 84  KFTVGDIV----GVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKAT 139

Query: 143 VHPADLCFKLPDNVSLEEGA--MC------EPLSVGLHACRRANIG-PETNVLIMGAGPI 193
           V       K+P+ +++E+ A  +C       PL           +  P     I+G G +
Sbjct: 140 VVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPL-------SHFGLKQPGLRGGILGLGGV 192

Query: 194 GLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT 253
           G + +  A+A G    VI   +  R    ++LGAD+ V + ++         K+ +   +
Sbjct: 193 GHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYV-IGSD-------QAKMSELADS 244

Query: 254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 286
            +D   D    +  +   LS  +  GK+ L+G+
Sbjct: 245 -LDYVIDTVPVHHALEPYLSLLKLDGKLILMGV 276

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score =  116 bits (293), Expect = 3e-30
 Identities = 65/279 (23%), Positives = 100/279 (35%), Gaps = 45/279 (16%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L+         GP DV + +   G+C SD+H    +R        P V GHE  G +  V
Sbjct: 35  LEPMDITRREPGPNDVKIEIAYCGVCHSDLH---QVRSEWAGTVYPCVPGHEIVGRVVAV 91

Query: 89  GSEVKTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKF-------FATPPVHG 136
           G +V+   PGD V    G+     SC  C+ C+ G  N C  M                G
Sbjct: 92  GDQVEKYAPGDLV----GVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLG 147

Query: 137 SLANQVVHPADLCFKLPDNVSLEEGA---MC------EPLSVGLHACRRANIGPETNVLI 187
             + Q+V       ++             +C       PL       R    GP   V +
Sbjct: 148 GYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPL-------RHWQAGPGKKVGV 200

Query: 188 MGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKI 247
           +G G +G + +  A A GA  +     +  R   AK LGAD +V  S N        +++
Sbjct: 201 VGIGGLGHMGIKLAHAMGAHVVAFTTSEAKR-EAAKALGADEVV-NSRN-------ADEM 251

Query: 248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 286
              + +  D   +       +    +  +  G + LVG 
Sbjct: 252 AAHLKS-FDFILNTVAAPHNLDDFTTLLKRDGTMTLVGA 289

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score =  110 bits (277), Expect = 5e-28
 Identities = 51/280 (18%), Positives = 91/280 (32%), Gaps = 53/280 (18%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCAD---FVVKEPMVIGHECAGVI 85
           ++++  EL ++   DV V+M A  I  SD+              + + P V G+E    +
Sbjct: 42  VELKNLELAAVRGSDVRVKMLAAPINPSDI-----NMIQGNYGLLPELPAVGGNEGVAQV 96

Query: 86  EKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHP 145
             VGS V  L PGD V                                  G+   + V  
Sbjct: 97  VAVGSNVTGLKPGDWVI---------------------------PANAGLGTWRTEAVFS 129

Query: 146 ADLCFKLPDNVSLEEGAMCEPLSV----GLHAC-RRANIGPETNVLIMGA-GPIGLVTML 199
            +   ++P ++ L+  A    L V              + P  +V+   +   +G   + 
Sbjct: 130 EEALIQVPSDIPLQSAAT---LGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQ 186

Query: 200 GARAFGAPRIVIV---DVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 256
            A A G   I +V             K LGA++++          E     +        
Sbjct: 187 IAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEE--LRRPEMKNFFKD--MPQPR 242

Query: 257 VSFDCAGFNKTMSTALSATRAGGKVCLVG-MGHLEMTVPL 295
           ++ +C G  K+ +  L     GG +   G M    +   +
Sbjct: 243 LALNCVG-GKSSTELLRQLARGGTMVTYGGMAKQPVVASV 281

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score =  108 bits (273), Expect = 1e-27
 Identities = 63/268 (23%), Positives = 99/268 (36%), Gaps = 45/268 (16%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE-PMVIGHECAG 83
           G   L+   F        ++ V  KA+GI   D +     R   +     P  +G E AG
Sbjct: 12  GPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYI----RSGLYPPPSLPSGLGTEAAG 67

Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
           ++ KVGS VK +  GDRV                           +A   + G+ ++   
Sbjct: 68  IVSKVGSGVKHIKAGDRVV--------------------------YAQSAL-GAYSSVHN 100

Query: 144 HPADLCFKLPDNVSLEEGAMCEPLSVGLHA----CRRANIGPETNVLIMG-AGPIGLVTM 198
             AD    LP  +S E+ A       GL       +   I P+   L    AG +GL+  
Sbjct: 101 IIADKAAILPAAISFEQAAAS--FLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIAC 158

Query: 199 LGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 258
             A+A GA  I  V     +   A + GA  ++      +D+ E +++I    G  + V 
Sbjct: 159 QWAKALGAKLIGTVGTAQ-KAQSALKAGAWQVINYRE--EDLVERLKEITG--GKKVRVV 213

Query: 259 FDCAGFNKTMSTALSATRAGGKVCLVGM 286
           +D  G   T   +L   +  G +   G 
Sbjct: 214 YDSVG-RDTWERSLDCLQRRGLMVSFGN 240

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score =  108 bits (272), Expect = 1e-27
 Identities = 80/303 (26%), Positives = 117/303 (38%), Gaps = 61/303 (20%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY------LKTLRCADFVVKEPMVIG 78
           G   L+   FE  + GP  V+VR KA+G+   D +Y         L         P  +G
Sbjct: 12  GPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFL---------PSGLG 62

Query: 79  HECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSL 138
            E AGV+E VG EV     GDRVA                          + T P+ G+ 
Sbjct: 63  AEGAGVVEAVGDEVTRFKVGDRVA--------------------------YGTGPL-GAY 95

Query: 139 ANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHAC----RRANIGPETNVLIMG-AGPI 193
           +   V P     KL D+VS E+ A    +  GL       +   + P   +L    AG +
Sbjct: 96  SEVHVLPEANLVKLADSVSFEQAAAL--MLKGLTVQYLLRQTYQVKPGEIILFHAAAGGV 153

Query: 194 GLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT 253
           G +    A+A GA  I  V   + + + AK LGA   +  S   +D+A+ V ++    G 
Sbjct: 154 GSLACQWAKALGAKLIGTVSSPE-KAAHAKALGAWETIDYSH--EDVAKRVLELTD--GK 208

Query: 254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM--GHLEMTVP---LTPAAARYLIYSFL 308
              V +D  G   T  T+L +    G V   G   G +   V    L    + Y+    L
Sbjct: 209 KCPVVYDGVG-QDTWLTSLDSVAPRGLVVSFGNASGPVS-GVNLGILAQKDSVYVTRPTL 266

Query: 309 FHF 311
             +
Sbjct: 267 GSY 269

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score =  109 bits (274), Expect = 2e-27
 Identities = 48/300 (16%), Positives = 95/300 (31%), Gaps = 61/300 (20%)

Query: 26  VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK-------TLRCADFVVKEPMVIG 78
           V   +    +  +L P +V+V+     +  SD++ ++                +     G
Sbjct: 18  VLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCG 77

Query: 79  HECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSL 138
           +E    + KVGS V +L  GD V                             +    G+ 
Sbjct: 78  NEGLFEVIKVGSNVSSLEAGDWVI---------------------------PSHVNFGTW 110

Query: 139 ANQVVHPADLCFKL-----------PDNVSLEEGAMCEPLSV----GLHAC-RRANIGPE 182
               +   D   KL           P+ +++ +GA    +SV              + P 
Sbjct: 111 RTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGAT---ISVNPLTAYLMLTHYVKLTPG 167

Query: 183 TNVLIMGA--GPIGLVTMLGARAFGAPRIVIV---DVDDYRLSVAKELGADNIVKVST-N 236
            +  I       +G       +      I ++      D  ++  KELGA  ++     N
Sbjct: 168 KDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNN 227

Query: 237 LQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG-MGHLEMTVPL 295
            ++    +++  K  G    ++ +C G  K+ +         G +   G M    +T+P 
Sbjct: 228 SREFGPTIKEWIKQSGGEAKLALNCVG-GKSSTGIARKLNNNGLMLTYGGMSFQPVTIPT 286

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score =  108 bits (271), Expect = 4e-27
 Identities = 55/282 (19%), Positives = 93/282 (32%), Gaps = 50/282 (17%)

Query: 15  EEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADF 69
           +  + +A       L+     +P+ GP  VL+++    I  SDV      Y         
Sbjct: 23  KTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQY-------GQ 75

Query: 70  VVKEPMVIGHECAGVIEKVGSEVKT-LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF 128
              +    G E  G I   G E     + G RVA   G+S                    
Sbjct: 76  PRVKGRPAGFEGVGTIVAGGDEPYAKSLVGKRVAFATGLS-------------------- 115

Query: 129 FATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVL 186
                  GS A   V  A  C  L D V  E+GA  +  PL+  +          E   +
Sbjct: 116 -----NWGSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTA-IAMFDIVKQEGEKAFV 169

Query: 187 IMGA-GPIGL-VTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEV 244
           +      +   +  L A+  G   IV V  D+ ++++ K++GA +++       D    +
Sbjct: 170 MTAGASQLCKLIIGL-AKEEGFRPIVTVRRDE-QIALLKDIGAAHVLNEKA--PDFEATL 225

Query: 245 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 286
            ++ K       +  D        S   +A     +  + G 
Sbjct: 226 REVMK--AEQPRIFLDAVT-GPLASAIFNAMPKRARWIIYGR 264

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score =  106 bits (268), Expect = 6e-27
 Identities = 52/305 (17%), Positives = 96/305 (31%), Gaps = 58/305 (19%)

Query: 19  MAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVH------YLKTLRCAD 68
           M A           LK+     P      +L+++ A  +   D        ++      +
Sbjct: 7   MKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNN 66

Query: 69  FVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF 128
                P  +G++ +G + ++GS+V  +  GD+V    G                      
Sbjct: 67  L----PSGLGYDFSGEVIELGSDVNNVNIGDKVMGIAGF--------------------- 101

Query: 129 FATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGL---HACRRANIGPETNV 185
              P      A  V    D   +  + +S  + A   P   GL    A  +A +     V
Sbjct: 102 ---PDHPCCYAEYVCASPDTIIQKLEKLSFLQAA-SLPT-AGLTALQALNQAEVKQGDVV 156

Query: 186 LIMG-AGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEV 244
           LI   AG +G + +  A+  G    VI        +  K LGA+  +      +D    +
Sbjct: 157 LIHAGAGGVGHLAIQLAKQKGT--TVITTASKRNHAFLKALGAEQCINYHE--EDFLLAI 212

Query: 245 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLI 304
                   T +D   D  G       ++   +  G   +V +  +     +  A  ++  
Sbjct: 213 -------STPVDAVIDLVG-GDVGIQSIDCLKETGC--IVSVPTITAGRVIEVAKQKHRR 262

Query: 305 YSFLF 309
              L 
Sbjct: 263 AFGLL 267

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score =  107 bits (270), Expect = 7e-27
 Identities = 54/286 (18%), Positives = 88/286 (30%), Gaps = 53/286 (18%)

Query: 18  NMAAWLLGV--NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPM 75
              A  +              P L    V VR++AV I  SD                  
Sbjct: 11  QQTALTVNDHDEVTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSM------RGQFATPWA 64

Query: 76  VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 135
            +G + AG +  VGS+V  +  GDRV                               P  
Sbjct: 65  FLGTDYAGTVVAVGSDVTHIQVGDRV----------YGAQNEMCPR----------TPDQ 104

Query: 136 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV-----GLH----------ACRRANIG 180
           G+ +   V    +  K+P  +S E+ A   P  +      +           A +     
Sbjct: 105 GAFSQYTVTRGRVWAKIPKGLSFEQAA-ALPAGISTAGLAMKLLGLPLPSPSADQPPTHS 163

Query: 181 PETNVLIMG-AGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQD 239
               VL+ G +     VTM   R  G   I I     +   +AK  GA+ +        +
Sbjct: 164 KPVYVLVYGGSTATATVTMQMLRLSGY--IPIATCSPHNFDLAKSRGAEEV--FDYRAPN 219

Query: 240 IAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSAT-RAGGKVCLV 284
           +    + I+      +  + DC    ++ +   +A  RAGG    +
Sbjct: 220 L---AQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSL 262

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score =  106 bits (267), Expect = 1e-26
 Identities = 52/267 (19%), Positives = 88/267 (32%), Gaps = 51/267 (19%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADFVVKEPMVIGHECAG 83
           L+++   +  L   +V VRM    I  SD+      Y          +  P + G+E  G
Sbjct: 20  LQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAY-------AHRIPLPNIPGYEGVG 72

Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
           ++E VG+ V   + G RV    G                             G+    V 
Sbjct: 73  IVENVGAFVSRELIGKRVLPLRG----------------------------EGTWQEYVK 104

Query: 144 HPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGA-GPIGL-VTML 199
             AD    +PD++     A     PL+  +      N+     +L+      IG     L
Sbjct: 105 TSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQL 164

Query: 200 GARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259
            ++      I +   +         LGA  ++  ST    + E V ++    G G D + 
Sbjct: 165 -SQILNFRLIAVTRNNK-HTEELLRLGAAYVIDTST--APLYETVMELTN--GIGADAAI 218

Query: 260 DCAGFNKTMSTALSATRAGGKVCLVGM 286
           D  G     +    + R  G    +G+
Sbjct: 219 DSIG-GPDGNELAFSLRPNGHFLTIGL 244

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score =  105 bits (264), Expect = 4e-26
 Identities = 51/303 (16%), Positives = 95/303 (31%), Gaps = 74/303 (24%)

Query: 6   MSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK--- 62
           +    K  GE             L +   + P  GP +VL+R++A  +  SD+  L    
Sbjct: 8   LRSRIKSSGELE-----------LSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAA 56

Query: 63  -----------------------TLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGD 99
                                   +R     +   M +G+E AGV+ + GS         
Sbjct: 57  DMSTAKASGTAERPIVTARVPEGAMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMG 116

Query: 100 RVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLE 159
           +     G + +                            +     PAD C  LP+  +  
Sbjct: 117 KTVAAIGGAMY----------------------------SQYRCIPADQCLVLPEGATPA 148

Query: 160 EGAMC--EPLSVGLHACRRANIGPETNVLIMG-AGPIGLVTMLGARAFGAPRIVIVDVDD 216
           +GA     PL+  L       +   + ++    A  +G +        G   + IV   +
Sbjct: 149 DGASSFVNPLTA-LGMVETMRLEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQE 207

Query: 217 YRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATR 276
            +  + K  GA ++   +       +++ +    + TG  ++FD  G  K     L+   
Sbjct: 208 -QADLLKAQGAVHV--CNAASPTFMQDLTEA--LVSTGATIAFDATGGGKLGGQILTCME 262

Query: 277 AGG 279
           A  
Sbjct: 263 AAL 265

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score =  103 bits (260), Expect = 1e-25
 Identities = 61/284 (21%), Positives = 100/284 (35%), Gaps = 64/284 (22%)

Query: 19  MAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADF 69
           M A +L    G+N L++    +P     ++ +R+KA G+   D+     +        D 
Sbjct: 4   MRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNI-------DN 56

Query: 70  VVKEPMVIGHECAGVIEKVGSEVKTLVPGDRV-ALEPGISCWRCDHCKGGRYNLCPEMKF 128
             K P+V G EC+G++E +G  VK    GDRV A                          
Sbjct: 57  PPKTPLVPGFECSGIVEALGDSVKGYEIGDRVMAFVNY---------------------- 94

Query: 129 FATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG-----LHACRRANIGPET 183
                   + A  V  P +  +K+PD++S  E A   P++       L     AN+    
Sbjct: 95  -------NAWAEVVCTPVEFVYKIPDDMSFSEAA-AFPMNFVTAYVMLF--EVANLREGM 144

Query: 184 NVLI-MGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAE 242
           +VL+    G +G               V      ++    K+       +      D  +
Sbjct: 145 SVLVHSAGGGVGQAVAQLCSTVPN-VTVFGTASTFKHEAIKDSVTHLFDRN----ADYVQ 199

Query: 243 EVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 286
           EV++I      G+D+  DC          LS  +  G   L G 
Sbjct: 200 EVKRIS---AEGVDIVLDCLC-GDNTGKGLSLLKPLGTYILYGS 239

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score =  102 bits (256), Expect = 3e-25
 Identities = 64/298 (21%), Positives = 117/298 (39%), Gaps = 49/298 (16%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
           G + +K + + +PS+   ++L++ K  G+   + ++    R   +  ++P V+G E +G 
Sbjct: 19  GYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYF----RKGIYPCEKPYVLGREASGT 74

Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           +   G  V     GD+VA                          + +       +   + 
Sbjct: 75  VVAKGKGVTNFEVGDQVA--------------------------YISNSTFAQYS--KIS 106

Query: 145 PADLCFKLPDNVSLEEGAMCEPLSV-GLHAC----RRANIGPETNVLIMG-AGPIGLVTM 198
                 KLP   S EE  +     +  L A        ++     VL+   AG +GL+  
Sbjct: 107 SQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILN 166

Query: 199 LGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 258
              +  GA  I +   D+ +L +AKE GA+ ++  S   +DI  +V K     G G+D S
Sbjct: 167 QLLKMKGAHTIAVASTDE-KLKIAKEYGAEYLINASK--EDILRQVLKFTN--GKGVDAS 221

Query: 259 FDCAGFNKTMSTALSATRAGGKVCLVGM--GHLEMTVPLTPAAAR--YLIYSFLFHFF 312
           FD  G   T   +L+A +  G     G   G +     +T  + +   L+   L+ + 
Sbjct: 222 FDSVG-KDTFEISLAALKRKGVFVSFGNASGLIP-PFSITRLSPKNITLVRPQLYGYI 277

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score =  100 bits (252), Expect = 9e-25
 Identities = 61/302 (20%), Positives = 111/302 (36%), Gaps = 57/302 (18%)

Query: 21  AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
           A+    +++ +   ++P+L   D+LV+ +A+GI   D    K ++          V G +
Sbjct: 9   AYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDW---KFIKANPINWSNGHVPGVD 65

Query: 81  CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH-GSLA 139
            AGVI KVG++V + + G RV                           + T     GS A
Sbjct: 66  GAGVIVKVGAKVDSKMLGRRV--------------------------AYHTSLKRHGSFA 99

Query: 140 NQVVHPADLCFKLPDNVSLEEGAMCEPLSVGL---HACRRANIGPETNVLIMGAGPIGLV 196
              V   D    LPDN+S E  A   P    L    A  +  +  +  VLI+G G +  +
Sbjct: 100 EFTVLNTDRVMTLPDNLSFERAA-ALPC-PLLTAWQAFEKIPLTKQREVLIVGFGAVNNL 157

Query: 197 TMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 256
                   G   +V +       ++A + G  ++       ++ ++  +           
Sbjct: 158 LTQMLNNAGY--VVDLVSASLSQALAAKRGVRHLY------REPSQVTQ--------KYF 201

Query: 257 VSFDCAGFNKTMSTALSATRAGGK-VCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFLIV 315
             FD    ++  +  + + +A G  +C+          P+ PA  R + Y  +    L  
Sbjct: 202 AIFDAVN-SQNAAALVPSLKANGHIICIQDRI----PAPIDPAFTRTISYHEIALGALHD 256

Query: 316 LG 317
            G
Sbjct: 257 FG 258

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score =  101 bits (253), Expect = 1e-24
 Identities = 66/292 (22%), Positives = 99/292 (33%), Gaps = 53/292 (18%)

Query: 6   MSQGEKEDGEEVNMAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYL 61
           M   E +     +M A       G   L     E P  GP  V+V +KA G+C  D    
Sbjct: 9   MGTLEAQTQGPGSMKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDY--- 65

Query: 62  KTLRCAD---FVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGG 118
             L         ++ P V G E AGV+     E   + PGDRV                 
Sbjct: 66  --LMTKGEYQLKMEPPFVPGIETAGVVRSAP-EGSGIKPGDRVMAFNF------------ 110

Query: 119 RYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG--LHA-CR 175
                            G  A +V          P  +   E       +      A  R
Sbjct: 111 ----------------IGGYAERVAVAPSNILPTPPQLDDAEAV-ALIANYHTMYFAYAR 153

Query: 176 RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS 234
           R  +     VL++GA G IG   +  A+  GA  I +V+         K +GAD ++ + 
Sbjct: 154 RGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTA-ATEFVKSVGADIVLPLE 212

Query: 235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 286
              +  A+ V +     G G+D+  D  G       A+    + G++ +VG 
Sbjct: 213 ---EGWAKAVREATG--GAGVDMVVDPIG-GPAFDDAVRTLASEGRLLVVGF 258

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score =  100 bits (252), Expect = 1e-24
 Identities = 66/290 (22%), Positives = 104/290 (35%), Gaps = 55/290 (18%)

Query: 31  IQPFELPSLGPYDVLVRMKAVGICGSDVH----YLKTLRCADFVVKEPMVIGHECAGVIE 86
           ++    P   P  VLV+++A G    D           +        P ++G + AG + 
Sbjct: 22  LRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPL-----PAILGMDLAGTVV 76

Query: 87  KVGSEVKTLVPGDRV-ALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHP 145
            VG EV +   GD V  L  G+                          + G+ A      
Sbjct: 77  AVGPEVDSFRVGDAVFGLTGGV------------------------GGLQGTHAQFAAVD 112

Query: 146 ADLCFKLPDNVSLEEGAMCEPLSVGLHA----CRRANIGPETNVLIM-GAGPIGLVTMLG 200
           A L    P  +++ + +   PL V + A      RA +     VLI  G G +G V +  
Sbjct: 113 ARLLASKPAALTMRQAS-VLPL-VFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQI 170

Query: 201 ARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260
           A A GA   V        L   ++LGA  I       ++  +   +     G G D+ +D
Sbjct: 171 ALARGA--RVFATARGSDLEYVRDLGATPID----ASREPEDYAAEH--TAGQGFDLVYD 222

Query: 261 CAGFNKTMSTALSATRAGGK-VCLVGMGHLEMTVPLTPAAARYLIYSFLF 309
             G    +  + SA +  G  V  +G G    T  L P + +   YS +F
Sbjct: 223 TLG-GPVLDASFSAVKRFGHVVSCLGWG----THKLAPLSFKQATYSGVF 267

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score =  100 bits (251), Expect = 2e-24
 Identities = 55/262 (20%), Positives = 92/262 (35%), Gaps = 50/262 (19%)

Query: 35  ELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADFVVKEPMVIGHECAGVIEKVG 89
            +P    + VL+++ A G+   +       Y             P   G + AGVIE VG
Sbjct: 51  AVPIPKDHQVLIKVHACGVNPVETYIRSGTY-------SRKPLLPYTPGSDVAGVIEAVG 103

Query: 90  SEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLC 149
                   GDRV                   +              G  A   +      
Sbjct: 104 DNASAFKKGDRVF-----------------TSSTI----------SGGYAEYALAADHTV 136

Query: 150 FKLPDNVSLEEGA-MCEPLSVGLHACR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGA 206
           +KLP+ +  ++GA +  P      A    A +    +VL+ GA G +GL     ARA+G 
Sbjct: 137 YKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL 196

Query: 207 PRIVIVDV-DDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFN 265
              ++     +    +  + GA  +        +  ++++K       GID+  +    N
Sbjct: 197 --KILGTAGTEEGQKIVLQNGAHEVFNHRE--VNYIDKIKKYVG--EKGIDIIIEMLA-N 249

Query: 266 KTMSTALSATRAGGKVCLVGMG 287
             +S  LS    GG+V +VG  
Sbjct: 250 VNLSKDLSLLSHGGRVIVVGSR 271

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score = 93.8 bits (234), Expect = 5e-22
 Identities = 60/281 (21%), Positives = 95/281 (33%), Gaps = 54/281 (19%)

Query: 18  NMAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCAD 68
            M    L    G + + I    LP  G  +VLVR +A+G+   D+      Y        
Sbjct: 28  EMRFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSY-------P 80

Query: 69  FVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF 128
                  ++G E +G I  VG  V     GD+V          C    GG Y        
Sbjct: 81  PPKDASPILGLELSGEIVGVGPGVSGYAVGDKV----------CGLANGGAY-------- 122

Query: 129 FATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA-MCEP-LSVGLHACRRANIGPETNVL 186
                     A   + PA      P      + A + E   +V  +  + A +    +VL
Sbjct: 123 ----------AEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVL 172

Query: 187 IM-GAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVE 245
           I  G   IG   +  ARAFGA           +    + LGA   +   +  +D A  ++
Sbjct: 173 IHGGTSGIGTTAIQLARAFGAEVYATAGSTG-KCEACERLGAKRGINYRS--EDFAAVIK 229

Query: 246 KIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 286
                 G G+D+  D  G        +++    G + ++  
Sbjct: 230 AET---GQGVDIILDMIG-AAYFERNIASLAKDGCLSIIAF 266

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score = 90.9 bits (226), Expect = 7e-21
 Identities = 58/320 (18%), Positives = 109/320 (34%), Gaps = 66/320 (20%)

Query: 19  MAAWLL----GVNTLKI-QPFELPSLG-PYDVLVRMKAVGICGSDVH----YLKTLR--- 65
             AW++        L+  Q   +P +  P +V+V++ A  +   DV+    Y  T     
Sbjct: 22  SMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMK 81

Query: 66  -----CADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY 120
                      + P+ +G + +GV+ + G +VK   PGD V                   
Sbjct: 82  RDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEV------------------- 122

Query: 121 NLCPEMKFFATPPVH-GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGL-------- 171
                  + A PP   G+L+  VV   +     P +++  + A   P  V L        
Sbjct: 123 -------WAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAA-SLPY-VALTAWSAINK 173

Query: 172 HACRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI 230
                        VLI+GA G +G   +   +A+ A   V          + ++LGAD++
Sbjct: 174 VGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDA--HVTAVCSQDASELVRKLGADDV 231

Query: 231 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE 290
           +   +    + E+++          D   D  G   T + A    +       V +    
Sbjct: 232 IDYKS--GSVEEQLKS-----LKPFDFILDNVG-GSTETWAPDFLKKWSGATYVTLVTPF 283

Query: 291 MTVPLTPAAARYLIYSFLFH 310
           +        A  ++ + +  
Sbjct: 284 LLNMDRLGIADGMLQTGVTV 303

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score = 86.4 bits (215), Expect = 1e-19
 Identities = 61/264 (23%), Positives = 97/264 (36%), Gaps = 63/264 (23%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCAD---FVVKEPMVIGHECAGVI 85
           L++     P     +V++R++AVG+  +D      L         +  P + G E  GV+
Sbjct: 13  LELVDLPEPEAEEGEVVLRVEAVGLNFADH-----LMRLGAYLTRLHPPFIPGMEVVGVV 67

Query: 86  EKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHP 145
           E           G R A                           A  P  G LA +V  P
Sbjct: 68  E-----------GRRYA---------------------------ALVP-QGGLAERVAVP 88

Query: 146 ADLCFKLPDNVSLEEGAMCEPLSVG--LHACRRANIGPETNVLIMG-AGPIGLVTMLGAR 202
                 LP+ +S EE A   P+S      A +RA   P   VL+   AG +G   +  AR
Sbjct: 89  KGALLPLPEGLSPEEAA-AFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVAR 147

Query: 203 AFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 262
           A G   +      + +L++   LGA+            AE  E+ +     G+D+  +  
Sbjct: 148 AMGLRVLAAASRPE-KLALPLALGAEEAA-------TYAEVPERAKA--WGGLDLVLEVR 197

Query: 263 GFNKTMSTALSATRAGGKVCLVGM 286
           G  K +  +L     GG++  +G 
Sbjct: 198 G--KEVEESLGLLAHGGRLVYIGA 219

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score = 86.1 bits (214), Expect = 3e-19
 Identities = 56/284 (19%), Positives = 97/284 (34%), Gaps = 58/284 (20%)

Query: 18  NMAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCAD 68
           +M A       G   L ++    PS G  +VL+++ A  +  +D+      Y        
Sbjct: 22  SMLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQY-------- 73

Query: 69  FVVK--EPMVIGHECAGVIEKVGSEVKT-LVPGDRVALEPGISCWRCDHCKGGRYNLCPE 125
                    ++G E +G + ++G   +     GD                 GG       
Sbjct: 74  -DPPPGASNILGLEASGHVAELGPGCQGHWKIGDTA----------MALLPGGGQ----- 117

Query: 126 MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA-MCEP-LSVGLHACRRANIGPET 183
                        A  V  P  L   +P+ ++L + A + E  L+         N+    
Sbjct: 118 -------------AQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGD 164

Query: 184 NVLIM-GAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAE 242
            VLI  G   +G   +   R  GA  +V       +L +A++LGA          +D +E
Sbjct: 165 YVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQK-KLQMAEKLGAAAGFNYKK--EDFSE 221

Query: 243 EVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 286
              K  K  G G+++  DC G        ++     G+  L G+
Sbjct: 222 ATLKFTK--GAGVNLILDCIG-GSYWEKNVNCLALDGRWVLYGL 262

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score = 85.5 bits (212), Expect = 4e-19
 Identities = 56/297 (18%), Positives = 97/297 (32%), Gaps = 53/297 (17%)

Query: 27  NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE 86
            +L       P+   +D+LV +KAV +   D    K  R       +  VIG++ AG++ 
Sbjct: 38  ASLLDIELPKPAPAGHDILVEVKAVSVNPVDY---KVRRSTPPDGTDWKVIGYDAAGIVS 94

Query: 87  KVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH-GSLANQVVHP 145
            VG +V    PGD V                          F+A   +  G+ A   +  
Sbjct: 95  AVGPDVTLFRPGDEV--------------------------FYAGSIIRPGTNAEFHLVD 128

Query: 146 ADLCFKLPDNVSLEEGAMCEPLSVGLHA----CRRANIGPETN-----VLIM-GAGPIGL 195
             +  + P  +   E A   PL   + A      R ++          +LI+ GAG +G 
Sbjct: 129 ERIVGRKPKTLDWAEAA-ALPL-TSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGS 186

Query: 196 VTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 255
           + +  AR      ++            K LGA +++  S   + +A EV  +        
Sbjct: 187 IAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHS---KPLAAEVAALG---LGAP 240

Query: 256 DVSFDCAGFNKTMSTALSATRAGGKVCL-VGMGHLEMTVPLTPAAARYLIYSFLFHF 311
              F     +K  +         G+ CL            +     + +       F
Sbjct: 241 AFVFSTTHTDKHAAEIADLIAPQGRFCLIDDPS----AFDIMLFKRKAVSIHHELMF 293

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score = 83.1 bits (206), Expect = 3e-18
 Identities = 63/300 (21%), Positives = 113/300 (37%), Gaps = 60/300 (20%)

Query: 27  NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE 86
           N  K    ++P    +++LV+++++ +   D       R    V K P V+G +  GV+E
Sbjct: 18  NLFKTFNLDIPEPKVHEILVKIQSISVNPVDTK----QR-LMDVSKAPRVLGFDAIGVVE 72

Query: 87  KVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA-TPPVHGSLANQVVHP 145
            VG+EV     GD V                          +++ +P  +GS A   +  
Sbjct: 73  SVGNEVTMFNQGDIV--------------------------YYSGSPDQNGSNAEYQLIN 106

Query: 146 ADLCFKLPDNVSLEE-GAMCEPLSVGLHA----CRRANIGPETN------VLIM-GAGPI 193
             L  K P N+S E+  ++  PL  G+ A         I    N      +LI+ GAG +
Sbjct: 107 ERLVAKAPKNISAEQAVSL--PL-TGITAYETLFDVFGISRNRNENEGKTLLIINGAGGV 163

Query: 194 GLVTMLGARAFGAPRIVIVDV-DDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG 252
           G +    A+A+G    VI     +  +   K++GAD ++    +L      + + +    
Sbjct: 164 GSIATQIAKAYGL--RVITTASRNETIEWTKKMGADIVLNHKESL------LNQFKTQGI 215

Query: 253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCL-VGMGHLEMTVPLTPAAARYLIYSFLFHF 311
             +D  F     +      +   +  G +   V   +      L     + L +S  F F
Sbjct: 216 ELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAFEN---DQDLNALKPKSLSFSHEFMF 272

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score = 78.1 bits (193), Expect = 2e-16
 Identities = 53/259 (20%), Positives = 87/259 (33%), Gaps = 50/259 (19%)

Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
            +P  G  D+LVR + VG+  SD++Y       D  VK P  IG E  G +  +G     
Sbjct: 47  PVPLPGDGDLLVRNRFVGVNASDINYSAGR--YDPSVKPPFDIGFEGIGEVVALGLSASA 104

Query: 95  -LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLP 153
               G  VA                                 GS A   V PA +   +P
Sbjct: 105 RYTVGQAVAYMAP-----------------------------GSFAEYTVVPASIATPVP 135

Query: 154 DNVSLEEGAMCEPL---SVGLHACRRANIGP-ETNVLIMGA-GPIG-LVTMLGARAFGAP 207
                E   +        + L       +   +  VL+  A G  G     L ++     
Sbjct: 136 SVKP-EYLTLLVSGTTAYISLK--ELGGLSEGKK-VLVTAAAGGTGQFAMQL-SKKAKCH 190

Query: 208 RIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKT 267
            I     D+ + +  K LG D  +   T  + +   ++   +    G+DV ++  G    
Sbjct: 191 VIGTCSSDE-KSAFLKSLGCDRPINYKT--EPVGTVLK---QEYPEGVDVVYESVG-GAM 243

Query: 268 MSTALSATRAGGKVCLVGM 286
              A+ A    G++ ++G 
Sbjct: 244 FDLAVDALATKGRLIVIGF 262

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 72.1 bits (177), Expect = 3e-14
 Identities = 39/179 (21%), Positives = 62/179 (34%), Gaps = 40/179 (22%)

Query: 32  QPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE 91
           +P     LG  +V + M+A G+   D   L  L     +      +G E AGV+ + G  
Sbjct: 229 EPTATAPLGDGEVRIAMRAAGVNFRDA--LIALG----MYPGVASLGSEGAGVVVETGPG 282

Query: 92  VKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFK 151
           V  L PGDRV                                +  +     V    +  +
Sbjct: 283 VTGLAPGDRVMG-----------------------------MIPKAFGPLAVADHRMVTR 313

Query: 152 LPDNVSLEEGAMCEPLSVG--LHA-CRRANIGPETNVLI-MGAGPIGLVTMLGARAFGA 206
           +P   S    A   P+      +A    A + P  ++L+   AG +G+  +  AR  GA
Sbjct: 314 IPAGWSFARAA-SVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGA 371

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330

 Score = 52.7 bits (127), Expect = 4e-08
 Identities = 55/281 (19%), Positives = 102/281 (36%), Gaps = 55/281 (19%)

Query: 28  TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF--VVKE-PMVIGHECAGV 84
           ++ ++      L    VL+++       S ++Y   L       +V+E P+++G + AG 
Sbjct: 18  SVHVKTISTEDLPKDGVLIKVAY-----SGINYKDGLAGKAGGNIVREYPLILGIDAAGT 72

Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWR--CDHCKGGRYNLCPEMKFFATPPVHGSLANQV 142
           +    S       GD V      + +                           G L+   
Sbjct: 73  VVS--SNDPRFAEGDEVIA----TSYELGVSR--------------------DGGLSEYA 106

Query: 143 VHPADLCFKLPDNVSLEE----GAMCEPLSVGLHACRRANIGPE-TNVLIMGA-GPIGLV 196
             P D    LP N+SL+E    G      ++ +H   +  + PE  +VL+ GA G +G +
Sbjct: 107 SVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGI 166

Query: 197 TMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI- 255
            +      G   +     +       K+LGA  ++          +  +   KA+     
Sbjct: 167 AVSMLNKRGYDVVAST-GNREAADYLKQLGASEVI-------SREDVYDGTLKALSKQQW 218

Query: 256 DVSFDCAGFNKTMSTALSATRAGGKVCLVGM---GHLEMTV 293
             + D  G  K +++ LS  + GG V + G+   G +  TV
Sbjct: 219 QGAVDPVG-GKQLASLLSKIQYGGSVAVSGLTGGGEVPATV 258

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328

 Score = 51.5 bits (124), Expect = 1e-07
 Identities = 54/282 (19%), Positives = 95/282 (33%), Gaps = 57/282 (20%)

Query: 28  TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF--VVKE-PMVIGHECAGV 84
           T  +Q   +  L   DVLVR+       S V+Y   L       +VK  P V G + AGV
Sbjct: 17  TAGVQTISMDDLPEGDVLVRVHY-----SSVNYKDGLASIPDGKIVKTYPFVPGIDLAGV 71

Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           +    S+      GD V      + +      G  +               G  +     
Sbjct: 72  VVS--SQHPRFREGDEVIA----TGYEI----GVTH--------------FGGYSEYARL 107

Query: 145 PADLCFKLPDNVSLEE----GAMCEPLSVGLHACRRANIGPETNVLIMGAGP--IGLVTM 198
             +    LP  ++L+E    G      ++ +H      + PE   +++      +G + +
Sbjct: 108 HGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAV 167

Query: 199 LGARAFGAPRIVIV---DVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 255
                 G             DY     + LGA  ++          + + +  + +    
Sbjct: 168 SMLAKRGYTVEASTGKAAEHDY----LRVLGAKEVL-------AREDVMAERIRPLDKQR 216

Query: 256 -DVSFDCAGFNKTMSTALSATRAGGKVCLVGM---GHLEMTV 293
              + D  G  +T++T LS  R GG V + G+     +  TV
Sbjct: 217 WAAAVDPVG-GRTLATVLSRMRYGGAVAVSGLTGGAEVPTTV 257

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 44.9 bits (106), Expect = 3e-05
 Identities = 41/266 (15%), Positives = 72/266 (27%), Gaps = 61/266 (22%)

Query: 35   ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
                    D L  +    +   DV  +         +    + G                
Sbjct: 1553 YALPASCQDRLCSVYYTSLNFRDV--MLATG----KLSPDSIPGKWLTRDCMLGMEFSGR 1606

Query: 95   LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 154
               G RV                        M           LA  V+      +++P 
Sbjct: 1607 DASGRRV------------------------MGMVPA----EGLATSVLLLQHATWEVPS 1638

Query: 155  NVSLEEGAMCEPLSV---------GLHACRRANIGPETNVLI-MGAGPIGLVTMLGARAF 204
              +LEE A     SV          L    R  + P  +VLI  G+G +G   +  A + 
Sbjct: 1639 TWTLEEAA-----SVPIVYTTAYYSLV--VRGRMQPGESVLIHSGSGGVGQAAIAIALSR 1691

Query: 205  GAPRIVIVDVD---DYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 261
            G      V       Y  +   +L          N +D + E   ++   G G+D+  + 
Sbjct: 1692 GCRVFTTVGSAEKRAYLQARFPQLDETCFA----NSRDTSFEQHVLRHTAGKGVDLVLNS 1747

Query: 262  AGFNKTMSTALSATRAGGKVCLVGMG 287
                + +  ++      G    + +G
Sbjct: 1748 LA-EEKLQASVRCLAQHG--RFLEIG 1770

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324

 Score = 44.2 bits (105), Expect = 3e-05
 Identities = 57/292 (19%), Positives = 95/292 (32%), Gaps = 57/292 (19%)

Query: 19  MAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF--VVK 72
           M A +L    G     +Q  E   L   DV V +       S ++Y   L       +++
Sbjct: 1   MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHW-----SSLNYKDALAITGKGKIIR 55

Query: 73  E-PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT 131
             PM+ G + AG +    SE      G  V L    + W      G  +           
Sbjct: 56  HFPMIPGIDFAGTVHA--SEDPRFHAGQEVLL----TGWGV----GENH----------- 94

Query: 132 PPVHGSLANQVVHPADLCFKLPDNVSLEE----GAMCEPLSVGLHACRRANIGPETNVLI 187
               G LA +     D    LP  +S       G       + + A   A I P+   ++
Sbjct: 95  ---WGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVV 151

Query: 188 MGAGP--IGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVE 245
           +      +G   +      G     +   +       K LGA+ I+    +  + AE   
Sbjct: 152 VTGASGGVGSTAVALLHKLGYQVAAVSGRESTH-GYLKSLGANRIL----SRDEFAES-- 204

Query: 246 KIQKAMGTGI-DVSFDCAGFNKTMSTALSATRAGGKVCLVGM---GHLEMTV 293
              + +   +   + D  G +K ++  L+    GG V   G+     L  TV
Sbjct: 205 ---RPLEKQLWAGAIDTVG-DKVLAKVLAQMNYGGCVAACGLAGGFALPTTV 252

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A* Length = 298

 Score = 40.2 bits (93), Expect = 6e-04
 Identities = 10/58 (17%), Positives = 27/58 (46%), Gaps = 5/58 (8%)

Query: 177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL----GADNI 230
                    + +G GP+ L  +L +  +G  R+ +V+++     +++++    G D +
Sbjct: 118 GRFRRGERAVFIGGGPLPLTGILLSHVYGM-RVNVVEIEPDIAELSRKVIEGLGVDGV 174

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	321
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.95
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.8
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	99.27
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	99.03
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.93
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.75
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.74
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.7
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.68
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.6
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	98.38
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.28
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	98.26
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	98.22
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	98.19
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	98.12
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	98.08
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	98.04
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.99
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.98
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.94
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	97.9
2b25_A	336	Hypothetical protein; structural genomics, methyl	97.87
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.81
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	97.76
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.75
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.74
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	97.71
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.7
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.66
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.58
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	97.58
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	97.55
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.55
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.46
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	97.46
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	97.45
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	97.45
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	97.44
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.43
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	97.42
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	97.39
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	97.38
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	97.36
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	97.36
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.35
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	97.34
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	97.34
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	97.33
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	97.33
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.33
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	97.33
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	97.32
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	97.32
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	97.31
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	97.31
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	97.3
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	97.3
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	97.29
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	97.28
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	97.28
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.28
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	97.27
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	97.26
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	97.25
4dqx_A	277	Probable oxidoreductase protein; structural genomi	97.25
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.25
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	97.24
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	97.24
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	97.23
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	97.23
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	97.22
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	97.22
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	97.22
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	97.2
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	97.2
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	97.2
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.19
1xhl_A	297	Short-chain dehydrogenase/reductase family member	97.17
1xq1_A	266	Putative tropinone reducatse; structural genomics,	97.17
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	97.16
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	97.16
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	97.16
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	97.16
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	97.15
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	97.15
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	97.15
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	97.14
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	97.12
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	97.12
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	97.12
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	97.12
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	97.12
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	97.12
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.11
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	97.1
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	97.09
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	97.09
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	97.09
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	97.09
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	97.09
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	97.08
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	97.08
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	97.07
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	97.07
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	97.06
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	97.05
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	97.05
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	97.05
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	97.04
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	97.04
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	97.02
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	97.02
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	97.01
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	97.01
1spx_A	278	Short-chain reductase family member (5L265); paral	97.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	96.97
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	96.97
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	96.97
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	96.97
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	96.96
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	96.95
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	96.94
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	96.94
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	96.93
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	96.93
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	96.93
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	96.93
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	96.93
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	96.93
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	96.92
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.92
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	96.91
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	96.91
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	96.89
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	96.88
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	96.88
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	96.88
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	96.87
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	96.87
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	96.87
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	96.86
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	96.85
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	96.84
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	96.83
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	96.83
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	96.83
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	96.82
3imf_A	257	Short chain dehydrogenase; structural genomics, in	96.82
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	96.82
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	96.81
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	96.81
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	96.81
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	96.8
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	96.8
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	96.8
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	96.79
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	96.79
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	96.79
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	96.78
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	96.78
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	96.78
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	96.78
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	96.77
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	96.77
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	96.76
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	96.75
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	96.75
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	96.74
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	96.74
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	96.74
1nvm_B	312	Acetaldehyde dehydrogenase (acylating), 4-hydroxy-	96.74
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	96.73
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	96.73
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	96.73
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	96.73
1xkq_A	280	Short-chain reductase family member (5D234); parra	96.72
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	96.72
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	96.72
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	96.72
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	96.72
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	96.72
3rih_A	293	Short chain dehydrogenase or reductase; structural	96.71
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	96.71
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	96.71
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	96.7
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	96.7
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	96.7
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	96.7
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	96.7
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	96.7
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	96.69
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	96.69
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	96.69
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	96.69
3cxt_A	291	Dehydrogenase with different specificities; rossma	96.68
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	96.67
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	96.67
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	96.66
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	96.66
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.66
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	96.65
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	96.65
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.65
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	96.65
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	96.64
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	96.63
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	96.62
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	96.61
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	96.61
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	96.61
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	96.6
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	96.6
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	96.59
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	96.59
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	96.59
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	96.58
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	96.58
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	96.58
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	96.56
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.56
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	96.55
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	96.55
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	96.54
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	96.54
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	96.54
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	96.53
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	96.52
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	96.52
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	96.52
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	96.51
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	96.51
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	96.51
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	96.5
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	96.49
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	96.49
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	96.48
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	96.48
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	96.48
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	96.47
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	96.45
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	96.45
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	96.45
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.44
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	96.44
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	96.44
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.43
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	96.43
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	96.43
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.42
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	96.42
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	96.4
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	96.39
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	96.39
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	96.38
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	96.38
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	96.38
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	96.37
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	96.36
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	96.35
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	96.35
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	96.34
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	96.33
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	96.33
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	96.32
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	96.32
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.32
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	96.3
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	96.3
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	96.3
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	96.29
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.28
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	96.28
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	96.27
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	96.27
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	96.25
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	96.25
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.24
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.22
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	96.2
1ixk_A	315	Methyltransferase; open beta sheet; 1.90A {Pyrococ	96.2
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	96.2
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	96.19
3e18_A	359	Oxidoreductase; dehydrogenase, NAD-binding, struct	96.18
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	96.17
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	96.17
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.16
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.15
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	96.15
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	96.14
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.14
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	96.13
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	96.1
1ej0_A	180	FTSJ; methyltransferase, adoMet, adenosyl methioni	96.1
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	96.09
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	96.08
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	96.06
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.06
1mjf_A	281	Spermidine synthase; spermidine synthetase, struct	96.05
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	96.05
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.04
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	96.04
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	96.04
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	96.04
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	96.04
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	96.03
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	96.02
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.02
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	96.02
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	96.02
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	96.01
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	96.01
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	96.0
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	95.99
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	95.97
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	95.97
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	95.94
1iy9_A	275	Spermidine synthase; rossmann fold, structural gen	95.94
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	95.94
1vl5_A	260	Unknown conserved protein BH2331; putative methylt	95.92
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	95.92
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	95.91
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	95.9
2pxx_A	215	Uncharacterized protein MGC2408; structural genomi	95.89
2i7c_A	283	Spermidine synthase; transferase, structural genom	95.89
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	95.88
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	95.88
3ajd_A	274	Putative methyltransferase MJ0026; tRNA, M5C, ross	95.88
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	95.88
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	95.87
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	95.86
1inl_A	296	Spermidine synthase; beta-barrel, rossman fold, st	95.85
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	95.85
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	95.84
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	95.83
2b2c_A	314	Spermidine synthase; beta-alpha, transferase; 2.50	95.83
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	95.82
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	95.82
3adn_A	294	Spermidine synthase; aminopropyltransferase, polya	95.82
2o07_A	304	Spermidine synthase; structural genomics, structur	95.81
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	95.8
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	95.79
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	95.78
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	95.77
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	95.75
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	95.73
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	95.73
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	95.73
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	95.73
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	95.72
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	95.7
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	95.7
3q2i_A	354	Dehydrogenase; rossmann fold, UDP-sugar binding, N	95.7
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	95.7
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	95.7
1xq6_A	253	Unknown protein; structural genomics, protein stru	95.69
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	95.68
2yxl_A	450	PH0851 protein, 450AA long hypothetical FMU protei	95.67
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	95.67
3bwc_A	304	Spermidine synthase; SAM, SGPP, structura genomics	95.65
1id1_A	153	Putative potassium channel protein; RCK domain, E.	95.64
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	95.64
3sm3_A	235	SAM-dependent methyltransferases; NESG, structural	95.63
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	95.62
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	95.62
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	95.61
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	95.6
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	95.59
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	95.58
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	95.57
1xxl_A	239	YCGJ protein; structural genomics, protein structu	95.57
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	95.57
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	95.54
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	95.54
4e4y_A	244	Short chain dehydrogenase family protein; structur	95.54
1dus_A	194	MJ0882; hypothetical protein, methanococcus jannas	95.53
1yzh_A	214	TRNA (guanine-N(7)-)-methyltransferase; alpha-beta	95.52
2pt6_A	321	Spermidine synthase; transferase, structural genom	95.52
3uwp_A	438	Histone-lysine N-methyltransferase, H3 lysine-79;	95.52
1u2z_A	433	Histone-lysine N-methyltransferase, H3 lysine-79 s	95.49
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	95.48
1sqg_A	429	SUN protein, FMU protein; rossmann-fold, mixed bet	95.46
1xj5_A	334	Spermidine synthase 1; structural genomics, protei	95.45
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	95.45
1g8a_A	227	Fibrillarin-like PRE-rRNA processing protein; rRNA	95.44
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	95.42
3g89_A	249	Ribosomal RNA small subunit methyltransferase G; 1	95.39
3m33_A	226	Uncharacterized protein; structural genomics, PSI-	95.38
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	95.37
2p35_A	259	Trans-aconitate 2-methyltransferase; SAM dependent	95.36
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	95.36
1uir_A	314	Polyamine aminopropyltransferase; spermidien synth	95.35
2fca_A	213	TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bac	95.34
3iv6_A	261	Putative Zn-dependent alcohol dehydrogenase; alpha	95.34
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	95.33
4hkt_A	331	Inositol 2-dehydrogenase; structural genomics, nys	95.32
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	95.31
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	95.31
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	95.26
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	95.26
3db2_A	354	Putative NADPH-dependent oxidoreductase; two domai	95.25
3ezy_A	344	Dehydrogenase; structural genomics, unknown functi	95.25
3qha_A	296	Putative oxidoreductase; seattle structural genomi	95.24
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	95.23
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	95.22
4had_A	350	Probable oxidoreductase protein; structural genomi	95.2
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	95.2
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	95.18
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	95.16
3hdj_A	313	Probable ornithine cyclodeaminase; APC62486, borde	95.15
4gek_A	261	TRNA (CMO5U34)-methyltransferase; structural genom	95.15
3gjy_A	317	Spermidine synthase; APC62791, structural genomics	95.15
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	95.13
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	95.11
3g5t_A	299	Trans-aconitate 3-methyltransferase; structural ge	95.11
1j4a_A	333	D-LDH, D-lactate dehydrogenase; NAD-dependent dehy	95.1
3f4k_A	257	Putative methyltransferase; structural genomics, P	95.1
3euw_A	344	MYO-inositol dehydrogenase; protein structure init	95.09
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	95.08
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	95.02
3e8s_A	227	Putative SAM dependent methyltransferase; NP_74470	95.01
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	95.01
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	94.99
4fb5_A	393	Probable oxidoreductase protein; PSI-biology, nysg	94.95
3o9z_A	312	Lipopolysaccaride biosynthesis protein WBPB; oxido	94.93
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	94.91
4gqa_A	412	NAD binding oxidoreductase; structural genomics, P	94.89
3g07_A	292	7SK snRNA methylphosphate capping enzyme; structur	94.88
3dxy_A	218	TRNA (guanine-N(7)-)-methyltransferase; rossmann f	94.86
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	94.84
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	94.84

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=2.7e-55  Score=405.94  Aligned_cols=295  Identities=38%  Similarity=0.631  Sum_probs=264.3

Q ss_pred             cchhhceeEEEccCCCeEEEEecCC--------CCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEE
Q 020768           13 DGEEVNMAAWLLGVNTLKIQPFELP--------SLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV   84 (321)
Q Consensus        13 ~~~~~~~a~~~~~~~~l~~~e~~~p--------~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~   84 (321)
                      +++++||++++.+++.++++++|.|        +|+++||||||.++++|++|++++.+...+....++|.++|||++|+
T Consensus         4 ~~~~~mka~~~~~~~~l~~~~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~E~~G~   83 (363)
T 3m6i_A            4 SASKTNIGVFTNPQHDLWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGE   83 (363)
T ss_dssp             -CCSCCEEEEECTTCCEEEEECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECCCEEEEE
T ss_pred             CCcccceeEEEeCCCcEEEEEecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcccCcceEEE
Confidence            4678899999999999999999999        99999999999999999999999886543443456799999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc
Q 020768           85 IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC  164 (321)
Q Consensus        85 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~  164 (321)
                      |+++|++|++|++||+|++.+..+|++|.+|+.+.+++|.+..+.+....+|+|+||+++++++++++|+ +++++||++
T Consensus        84 V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~-~s~~~aa~~  162 (363)
T 3m6i_A           84 VIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKIGN-MSYENGAML  162 (363)
T ss_dssp             EEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTSTTSCCSCBSEEEEEGGGEEECTT-CCHHHHHHH
T ss_pred             EEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccccCCCCCCccceeEEEEehhhEEECCC-CCHHHHHhh
Confidence            9999999999999999999999999999999999999999998877766889999999999999999999 999999988


Q ss_pred             hhhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCC---CcccHH
Q 020768          165 EPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST---NLQDIA  241 (321)
Q Consensus       165 ~~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~---~~~~~~  241 (321)
                      ++++|||++++.+++++|++|||+|+|++|++++|+||++|+++|++++++++|+++++++ ++.++++..   ...++.
T Consensus       163 ~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~~~~~~~~~~~~~~~~  241 (363)
T 3m6i_A          163 EPLSVALAGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPEVVTHKVERLSAEESA  241 (363)
T ss_dssp             HHHHHHHHHHHHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTTCEEEECCSCCHHHHH
T ss_pred             hHHHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chhcccccccccchHHHH
Confidence            8999999999889999999999999999999999999999997799999999999999999 766665532   234555


Q ss_pred             HHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehh
Q 020768          242 EEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF  311 (321)
Q Consensus       242 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~  311 (321)
                      +.++++  +.+.++|+|||++|++..++.++++|+++|+++.+|.......++...++.|++++.|++.+
T Consensus       242 ~~v~~~--t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~  309 (363)
T 3m6i_A          242 KKIVES--FGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASVREVDLQFQYRY  309 (363)
T ss_dssp             HHHHHH--TSSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCSCCCCCHHHHHHHTCEEEECCSC
T ss_pred             HHHHHH--hCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCCCccccHHHHHhcCcEEEEccCC
Confidence            555554  23678999999999987899999999999999999987777778888899999999999764

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=6.1e-55  Score=404.37  Aligned_cols=297  Identities=31%  Similarity=0.523  Sum_probs=263.6

Q ss_pred             cccccchhhceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEe
Q 020768            9 GEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV   88 (321)
Q Consensus         9 ~~~~~~~~~~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~v   88 (321)
                      .++..+|.+|||+++.+++.++++++|.|+|+++||+|||.+++||++|++++.|.+.    ..+|.++|||++|+|+++
T Consensus        15 ~~~~~~p~~mkA~v~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~----~~~p~v~G~e~~G~V~~v   90 (370)
T 4ej6_A           15 TENLYFQSMMKAVRLESVGNISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFP----STPPVTLGHEFCGIVVEA   90 (370)
T ss_dssp             ------CCEEEEEEEEETTEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTSSC----CCSSEECCCSEEEEEEEE
T ss_pred             ccccccchheEEEEEecCCceEEEEccCCCCCCCeEEEEEEEEeecHHHHHHHcCCCC----CCCCeecCcceEEEEEEE
Confidence            4556788889999999999999999999999999999999999999999999987642    567999999999999999


Q ss_pred             CCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhH
Q 020768           89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS  168 (321)
Q Consensus        89 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~  168 (321)
                      |++|++|++||+|++.+..+|+.|++|+.+++++|.+...++. ..+|+|+||++++++.++++|+++++++||+..+++
T Consensus        91 G~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~~P~~~~~~~aal~~~~~  169 (370)
T 4ej6_A           91 GSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGI-HRDGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLA  169 (370)
T ss_dssp             CTTCCSSCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGEEEECTTSCTTGGGGHHHHH
T ss_pred             CCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCccccCC-CCCCcceEEEEEchhhEEECCCCCCHHHHhhhhHHH
Confidence            9999999999999999999999999999999999999887765 478999999999999999999999999999778999


Q ss_pred             HHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHH
Q 020768          169 VGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQ  248 (321)
Q Consensus       169 ~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~  248 (321)
                      ++|++++.+++++|++|||+|+|++|++++|+|+++|+++|++++++++|.++++++|++.++++.+  .++.+.+++..
T Consensus       170 ta~~~l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~--~~~~~~i~~~~  247 (370)
T 4ej6_A          170 CCLHGVDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSA--GDVVEAIAGPV  247 (370)
T ss_dssp             HHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTS--SCHHHHHHSTT
T ss_pred             HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCC--cCHHHHHHhhh
Confidence            9999998899999999999999999999999999999988999999999999999999999998654  46666555421


Q ss_pred             HHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC--CccccchhhhccceEEEEeehhH
Q 020768          249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL--EMTVPLTPAAARYLIYSFLFHFF  312 (321)
Q Consensus       249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~k~~~i~g~~~~~  312 (321)
                      ...++++|+||||+|++..++.++++|+++|+++.+|....  ..+++...++.|++++.|++.+.
T Consensus       248 ~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~  313 (370)
T 4ej6_A          248 GLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINP  313 (370)
T ss_dssp             SSSTTCEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTTCCCCCCHHHHHHTTCEEEECCSCT
T ss_pred             hccCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCCCCccccCHHHHHhCCcEEEEeccCh
Confidence            12234899999999988899999999999999999997655  56788888999999999998654

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.9e-54  Score=396.60  Aligned_cols=296  Identities=49%  Similarity=0.824  Sum_probs=258.4

Q ss_pred             chhhceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCC
Q 020768           14 GEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (321)
Q Consensus        14 ~~~~~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~   93 (321)
                      |+++||++++.+++.++++++|.|+|+++||||||.+++||++|++.+.+.........+|.++|||++|+|+++|++|+
T Consensus         1 m~~~mka~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG~~v~   80 (352)
T 1e3j_A            1 MASDNLSAVLYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVK   80 (352)
T ss_dssp             ---CCEEEEEEETTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCC
T ss_pred             CcccCEEEEEEcCCcEEEEEecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeCCCCC
Confidence            45679999999888999999999999999999999999999999998875332222245799999999999999999999


Q ss_pred             CCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHH
Q 020768           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHA  173 (321)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~  173 (321)
                      +|++||+|++.+..+|+.|.+|+.+++++|++..+.+....+|+|+||+++++++++++|+++++++||++.++++||++
T Consensus        81 ~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~ta~~a  160 (352)
T 1e3j_A           81 HLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALLEPLSVGVHA  160 (352)
T ss_dssp             SCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHTHHHHHHHHHH
T ss_pred             CCCCCCEEEEcCcCCCCCChhhhCcCcccCCCCcccCcCCCCccceeEEEeChHHeEECcCCCCHHHHHhhchHHHHHHH
Confidence            99999999999999999999999999999999877665456899999999999999999999999999988899999999


Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHH-hC
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA-MG  252 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~-~~  252 (321)
                      ++.+++++|++|||+|+|++|++++|+|+++|++ |++++++++|.++++++|++.++++.+ ..++.+.+.+.... .+
T Consensus       161 l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~-Vi~~~~~~~~~~~~~~lGa~~~~~~~~-~~~~~~~i~~~~~~~~g  238 (352)
T 1e3j_A          161 CRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAF-VVCTARSPRRLEVAKNCGADVTLVVDP-AKEEESSIIERIRSAIG  238 (352)
T ss_dssp             HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHTTCSEEEECCT-TTSCHHHHHHHHHHHSS
T ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCE-EEEEcCCHHHHHHHHHhCCCEEEcCcc-cccHHHHHHHHhccccC
Confidence            9889999999999999999999999999999994 899999999999999999999888653 13455555544210 14


Q ss_pred             CCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehh
Q 020768          253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF  311 (321)
Q Consensus       253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~  311 (321)
                      .++|++||++|.+..++.++++|+++|+++.+|......+++...++.|++++.|++.+
T Consensus       239 ~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~  297 (352)
T 1e3j_A          239 DLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRY  297 (352)
T ss_dssp             SCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCCCCCHHHHHTTTCEEEECCSC
T ss_pred             CCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccccHHHHHhcCcEEEEeccc
Confidence            68999999999977899999999999999999976555678888899999999998754

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=4.6e-54  Score=396.66  Aligned_cols=294  Identities=48%  Similarity=0.824  Sum_probs=259.6

Q ss_pred             hhhceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768           15 EEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (321)
Q Consensus        15 ~~~~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~   94 (321)
                      +++||++++.+++.++++|+|.|+|+++||||||.++++|++|++++.+.........+|.++|||++|+|+++|++|++
T Consensus         5 ~~~mka~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~V~~   84 (356)
T 1pl8_A            5 KPNNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKH   84 (356)
T ss_dssp             CCCCEEEEEEETTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCS
T ss_pred             ccCceEEEEecCCcEEEEEccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCCCCC
Confidence            35699999998889999999999999999999999999999999988754322222357999999999999999999999


Q ss_pred             CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHHH
Q 020768           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHAC  174 (321)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l  174 (321)
                      |++||+|++.+..+|++|.+|+.+++++|.+..+++....+|+|+||++++++.++++|+++++++||++.+++++|+++
T Consensus        85 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~~~~~~ta~~al  164 (356)
T 1pl8_A           85 LKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHAC  164 (356)
T ss_dssp             CCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeccCCCCCChHHHCcCcccCCCccccCcCCCCCccccEEEeehHHEEECcCCCCHHHHHhhchHHHHHHHH
Confidence            99999999999999999999999999999998776654468999999999999999999999999999888999999999


Q ss_pred             HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCC-cccHHHHHHHHHHHhCC
Q 020768          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTN-LQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~-~~~~~~~~~~~~~~~~~  253 (321)
                      +.+++++|++|||+|+|++|++++|+|+++|+++|++++++++|.++++++|++.+++++.. ..++.+.+.+.   .+.
T Consensus       165 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~---~~~  241 (356)
T 1pl8_A          165 RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQ---LGC  241 (356)
T ss_dssp             HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHH---HTS
T ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHH---hCC
Confidence            88999999999999999999999999999999779999999999999999999999886521 13455555443   236


Q ss_pred             CccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehh
Q 020768          254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF  311 (321)
Q Consensus       254 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~  311 (321)
                      ++|+|||++|.+..++.++++|+++|+++.+|......++++..++.|++++.|++.+
T Consensus       242 g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~  299 (356)
T 1pl8_A          242 KPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRY  299 (356)
T ss_dssp             CCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEEEECCSC
T ss_pred             CCCEEEECCCChHHHHHHHHHhcCCCEEEEEecCCCCCccCHHHHHhcceEEEEeccc
Confidence            8999999999987899999999999999999976555678888899999999998754

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=5.8e-54  Score=394.82  Aligned_cols=292  Identities=29%  Similarity=0.499  Sum_probs=246.2

Q ss_pred             chhhceeEEEccCC-CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhc-cccCCcCCCCCcccccceeEEEEEeCCC
Q 020768           14 GEEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKT-LRCADFVVKEPMVIGHECAGVIEKVGSE   91 (321)
Q Consensus        14 ~~~~~~a~~~~~~~-~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g-~~~~~~~~~~p~~~G~e~vG~V~~vG~~   91 (321)
                      ||++||++++.+++ .++++|+|.|+|+++||||||.++++|++|++.+.| .++. ....+|.++|||++|+|+++|++
T Consensus         1 ~m~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~~~~~p~v~G~E~~G~V~~vG~~   79 (348)
T 2d8a_A            1 MSEKMVAIMKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQ-SRIKPPQIMGHEVAGEVVEIGPG   79 (348)
T ss_dssp             --CEEEEEEECSSSSSCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHH-HHCCSSEECCCEEEEEEEEECTT
T ss_pred             CCCcceEEEEECCCCCEEEEECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCc-ccCCCCCccCccceEEEEEECCC
Confidence            46789999999887 899999999999999999999999999999999987 3210 11457999999999999999999


Q ss_pred             CCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHH
Q 020768           92 VKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGL  171 (321)
Q Consensus        92 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~  171 (321)
                      |++|++||+|++.+..+|++|++|+.+++++|.+..+++. ..+|+|+||++++++.++++|+++++++||++++++|||
T Consensus        80 v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~ta~  158 (348)
T 2d8a_A           80 VEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAV  158 (348)
T ss_dssp             CCSCCTTCEEEECCEECCSCCC------------CEETTT-SSCCSSBSEEEEEGGGEEECCTTSCHHHHTTHHHHHHHH
T ss_pred             CCcCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCeecC-CCCCcCcceEEeChHHeEECCCCCCHHHHHhhhHHHHHH
Confidence            9999999999999999999999999999999998876653 467999999999999999999999999999888999999


Q ss_pred             HHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768          172 HACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       172 ~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      ++++.+++ +|++|||+|+|++|++++|+|+.+|+++|+++++++++.++++++|++.++++++  .++.+.+.++.  .
T Consensus       159 ~~l~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~--~~~~~~v~~~~--~  233 (348)
T 2d8a_A          159 DTVLAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFE--EDVVKEVMDIT--D  233 (348)
T ss_dssp             HHHTTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTT--SCHHHHHHHHT--T
T ss_pred             HHHHhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCC--cCHHHHHHHHc--C
Confidence            99988889 9999999999999999999999999966899999999999999999999988654  46666666542  3


Q ss_pred             CCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccc-hhhhccceEEEEeehhH
Q 020768          252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPL-TPAAARYLIYSFLFHFF  312 (321)
Q Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~k~~~i~g~~~~~  312 (321)
                      +.++|++||++|.+..++.++++++++|+++.+|......+++. ..++.|++++.|+..+.
T Consensus       234 g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~  295 (348)
T 2d8a_A          234 GNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRH  295 (348)
T ss_dssp             TSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHTTTTTCEEEECCCCC
T ss_pred             CCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCcccCchHHHHhCCcEEEEecCCC
Confidence            56899999999988889999999999999999998766667887 77889999999986543

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=5.6e-53  Score=387.87  Aligned_cols=284  Identities=27%  Similarity=0.450  Sum_probs=257.5

Q ss_pred             ceeEEEccCCCeEEEEecCCC-CCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768           18 NMAAWLLGVNTLKIQPFELPS-LGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (321)
Q Consensus        18 ~~a~~~~~~~~l~~~e~~~p~-~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~   96 (321)
                      |||+++.+++.++++|+|.|+ +++|||||||.+++||++|++.+.+...    ..+|+++|||++|+|+++|++|++|+
T Consensus         1 MkAvv~~~~g~l~v~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~~----~~~P~i~G~E~~G~V~~vG~~V~~~~   76 (346)
T 4a2c_A            1 MKSVVNDTDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGA----HYYPITLGHEFSGYIDAVGSGVDDLH   76 (346)
T ss_dssp             CEEEEECSSSCEEEEECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSCS----SSSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             CCEEEEecCCCEEEEEEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCCC----CCCCccccEEEEEEEEEECCCccccc
Confidence            899999999999999999998 5799999999999999999998887532    56799999999999999999999999


Q ss_pred             CCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHHHHH
Q 020768           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRR  176 (321)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~  176 (321)
                      +||+|.+.+..+|++|.+|..+.+++|.+..+.+. ..+|+|+||+++|+++++++|+++++++||+++++++++++++.
T Consensus        77 ~GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~~~~~~~~  155 (346)
T 4a2c_A           77 PGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGS-RRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHAFHL  155 (346)
T ss_dssp             TTCEEEECCEECCSCSHHHHTTCGGGCSSCEEBTT-TBCCSSBSEEEEEGGGEEECCTTSCGGGGGGHHHHHHHHHHHHH
T ss_pred             CCCeEEeeeccCCCCcccccCCccccCCCcccccC-CCCcccccccccchheEEECCCCCCHHHHHhchHHHHHHHHHHH
Confidence            99999999999999999999999999999887764 67899999999999999999999999999999888888888899


Q ss_pred             cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .++++|++|||+|+|++|++++|+|+++|+.++++++++++|+++++++|+++++++.+  .++.+..+++.  .+.++|
T Consensus       156 ~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~--~~~~~~~~~~~--~~~g~d  231 (346)
T 4a2c_A          156 AQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSE--MSAPQMQSVLR--ELRFNQ  231 (346)
T ss_dssp             TTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTT--SCHHHHHHHHG--GGCSSE
T ss_pred             hccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCC--CCHHHHHHhhc--ccCCcc
Confidence            99999999999999999999999999999988899999999999999999999999765  45555555543  367899


Q ss_pred             EEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCc---cccchhhhccceEEEEeeh
Q 020768          257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEM---TVPLTPAAARYLIYSFLFH  310 (321)
Q Consensus       257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~---~~~~~~~~~k~~~i~g~~~  310 (321)
                      +++|++|.+..++.++++++++|+++++|....+.   .+++..++.|++++.|++.
T Consensus       232 ~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~  288 (346)
T 4a2c_A          232 LILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWM  288 (346)
T ss_dssp             EEEECSCSHHHHHHHHHHCCTTCEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCT
T ss_pred             cccccccccchhhhhhheecCCeEEEEEeccCCCccccccCHHHHhhceeEEEEEec
Confidence            99999999999999999999999999999876653   3455668899999999865

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=8.6e-53  Score=391.17  Aligned_cols=293  Identities=24%  Similarity=0.369  Sum_probs=255.0

Q ss_pred             ccchhhceeEEEccCCC-eEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCC
Q 020768           12 EDGEEVNMAAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGS   90 (321)
Q Consensus        12 ~~~~~~~~a~~~~~~~~-l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~   90 (321)
                      +.++.+|||+++.+++. ++++|+|.|+|+++||||||.+++||++|++++.|..+.   ..+|.++|||++|+|+++|+
T Consensus         3 ~~~~~tmkA~v~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~P~v~GhE~~G~V~~vG~   79 (378)
T 3uko_A            3 QGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPE---GLFPCILGHEAAGIVESVGE   79 (378)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTCCTT---CCSSBCCCCEEEEEEEEECT
T ss_pred             cccceeeEEEEEecCCCccEEEEecCCCCCCCeEEEEEEEeecCHHHHHHhcCCCCC---CCCCccCCccceEEEEEeCC
Confidence            35678899999998764 999999999999999999999999999999999886432   46799999999999999999


Q ss_pred             CCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCcccc---cc------------------CCCCCcceeEEEecCCcE
Q 020768           91 EVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT------------------PPVHGSLANQVVHPADLC  149 (321)
Q Consensus        91 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------------------~~~~G~~~~~~~v~~~~~  149 (321)
                      +|++|++||+|++.+..+|++|++|+.+++++|.+....   +.                  ....|+|+||++++++.+
T Consensus        80 ~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~  159 (378)
T 3uko_A           80 GVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSV  159 (378)
T ss_dssp             TCCSCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEEGGGE
T ss_pred             CCCcCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEechhhe
Confidence            999999999999999999999999999999999986431   10                  112379999999999999


Q ss_pred             EECCCCCChhhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCC
Q 020768          150 FKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA  227 (321)
Q Consensus       150 ~~ip~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~  227 (321)
                      +++|+++++++||+++ ++.+||+++ +.+++++|++|||+|+|++|++++|+|+++|+++|++++.+++|+++++++|+
T Consensus       160 ~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa  239 (378)
T 3uko_A          160 AKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGV  239 (378)
T ss_dssp             EECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTC
T ss_pred             EECCCCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCC
Confidence            9999999999999876 788999987 56899999999999999999999999999999779999999999999999999


Q ss_pred             CeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccC-CEEEEEcCCCCC--ccccchhhhccceE
Q 020768          228 DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHLE--MTVPLTPAAARYLI  304 (321)
Q Consensus       228 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~k~~~  304 (321)
                      ++++++.+...++.+.++++.   ++++|+||||+|++..++.++++++++ |+++.+|.....  .+++...++ ++++
T Consensus       240 ~~vi~~~~~~~~~~~~i~~~~---~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~-~~~~  315 (378)
T 3uko_A          240 NEFVNPKDHDKPIQEVIVDLT---DGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRV  315 (378)
T ss_dssp             CEEECGGGCSSCHHHHHHHHT---TSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHH-TTCE
T ss_pred             cEEEccccCchhHHHHHHHhc---CCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCCCccccCHHHHh-cCcE
Confidence            999987654567777776653   349999999999988999999999996 999999976543  345555555 4999


Q ss_pred             EEEeehh
Q 020768          305 YSFLFHF  311 (321)
Q Consensus       305 i~g~~~~  311 (321)
                      +.|++..
T Consensus       316 i~g~~~~  322 (378)
T 3uko_A          316 WKGTAFG  322 (378)
T ss_dssp             EEECSGG
T ss_pred             EEEEEec
Confidence            9998754

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=7.8e-53  Score=391.63  Aligned_cols=308  Identities=24%  Similarity=0.399  Sum_probs=259.2

Q ss_pred             CCCCCCCCcccccchhhceeEEEccCC-CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCccccc
Q 020768            1 MGKGGMSQGEKEDGEEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH   79 (321)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~a~~~~~~~-~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~   79 (321)
                      ||.+.++.....-|.-+||++++.+++ .++++|+|.|+|+++||||||.+++||++|++++.|.++   ...+|.++||
T Consensus         1 ~~~~~~~~~~~~~~~~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~---~~~~P~v~Gh   77 (380)
T 1vj0_A            1 MGSDKIHHHHHHMMGLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDP---RVPLPIILGH   77 (380)
T ss_dssp             -------------CCEEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCT---TCCSSBCCCC
T ss_pred             CCccccchhhhhHhhhheEEEEEecCCCCeEEEEccCCCCCCCEEEEEEeEEeecccchHHhcCCCC---CCCCCcccCc
Confidence            455555555556677789999999887 899999999999999999999999999999999987542   1357999999


Q ss_pred             ceeEEEEEeCCCCC------CCCCCCEEEEcCCccCCCCcccc-CCCCCCCCCccccccC-------CCCCcceeEEEe-
Q 020768           80 ECAGVIEKVGSEVK------TLVPGDRVALEPGISCWRCDHCK-GGRYNLCPEMKFFATP-------PVHGSLANQVVH-  144 (321)
Q Consensus        80 e~vG~V~~vG~~v~------~~~~Gd~V~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-------~~~G~~~~~~~v-  144 (321)
                      |++|+|+++| +|+      +|++||+|++.+..+|++|++|+ .+++++|.+...++..       ..+|+|+||+++ 
T Consensus        78 E~~G~V~~vG-~V~~~~~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~~g~~~~~~~~~~~~G~~aey~~v~  156 (380)
T 1vj0_A           78 EGAGRVVEVN-GEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLD  156 (380)
T ss_dssp             EEEEEEEEES-SCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEEC
T ss_pred             CcEEEEEEeC-CccccccCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcceeccccccCCCCCCCccccceEEEc
Confidence            9999999999 999      99999999999999999999999 9999999987665531       357999999999 


Q ss_pred             cCCcEEECCCCCChh-hhccchhhHHHHHHHHHcC-CCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH
Q 020768          145 PADLCFKLPDNVSLE-EGAMCEPLSVGLHACRRAN-IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA  222 (321)
Q Consensus       145 ~~~~~~~ip~~~~~~-~aa~~~~~~~a~~~l~~~~-~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~  222 (321)
                      +++.++++|++++++ +|+++++++|||++++.++ +++|++|||+|+|++|++++|+|+++|+.+|++++++++|++++
T Consensus       157 ~~~~~~~iP~~l~~~~~Aa~~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~  236 (380)
T 1vj0_A          157 PETDVLKVSEKDDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLA  236 (380)
T ss_dssp             TTCCEEEECTTSCHHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH
T ss_pred             ccceEEECCCCCChHHhHhhhcHHHHHHHHHHhcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHH
Confidence            999999999999999 8888889999999998888 99999999999999999999999999954799999999999999


Q ss_pred             HHcCCCeEEecCC-CcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCC-C-Cccccchh-h
Q 020768          223 KELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-L-EMTVPLTP-A  298 (321)
Q Consensus       223 ~~~g~~~vi~~~~-~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~-~~~~~~~~-~  298 (321)
                      +++|++.++++.. ...++.+.++++.  .+.++|+|||++|.+..++.++++|+++|+++.+|... . +.+++... +
T Consensus       237 ~~lGa~~vi~~~~~~~~~~~~~v~~~~--~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~  314 (380)
T 1vj0_A          237 EEIGADLTLNRRETSVEERRKAIMDIT--HGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWL  314 (380)
T ss_dssp             HHTTCSEEEETTTSCHHHHHHHHHHHT--TTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHT
T ss_pred             HHcCCcEEEeccccCcchHHHHHHHHh--CCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCCeeEchHHHH
Confidence            9999999988641 1345555555542  24589999999998778999999999999999999765 4 56788888 8


Q ss_pred             hccceEEEEeehhHHH
Q 020768          299 AARYLIYSFLFHFFLI  314 (321)
Q Consensus       299 ~~k~~~i~g~~~~~~~  314 (321)
                      +.|++++.|++.+...
T Consensus       315 ~~~~~~i~g~~~~~~~  330 (380)
T 1vj0_A          315 VLKNATFKGIWVSDTS  330 (380)
T ss_dssp             TTTTCEEEECCCCCHH
T ss_pred             HhCCeEEEEeecCCHH
Confidence            9999999998765433

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=3.8e-52  Score=381.55  Aligned_cols=290  Identities=28%  Similarity=0.372  Sum_probs=258.6

Q ss_pred             hceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCC
Q 020768           17 VNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (321)
Q Consensus        17 ~~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~   95 (321)
                      +|||+++.++ +.++++|+|.|+|+++||||||.++++|++|+++++|.++..  ..+|.++|||++|+|+++|++|++|
T Consensus         2 ~MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~~P~v~G~E~~G~V~~vG~~v~~~   79 (340)
T 3s2e_A            2 MMKAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVK--PTLPFIPGHEGVGYVSAVGSGVSRV   79 (340)
T ss_dssp             EEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSSSC--CCSSBCCCSEEEEEEEEECSSCCSC
T ss_pred             ceEEEEEecCCCCCEEEEccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCCCC--CCCCcccCCcceEEEEEECCCCCcC
Confidence            4999999865 469999999999999999999999999999999999865322  4679999999999999999999999


Q ss_pred             CCCCEEE-EcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHH
Q 020768           96 VPGDRVA-LEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (321)
Q Consensus        96 ~~Gd~V~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~  173 (321)
                      ++||+|. ..+..+|+.|.+|+.+++++|.+....+. ..+|+|+||++++++.++++|+++++++||.++ ++.+||++
T Consensus        80 ~vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~  158 (340)
T 3s2e_A           80 KEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGY-SVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKG  158 (340)
T ss_dssp             CTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEECTTTSEECCTTSCHHHHGGGGTHHHHHHHH
T ss_pred             CCCCEEEecCCCCCCCCChHHhCcCcccCccccccCC-CCCCcceeEEEechHHEEECCCCCCHHHhhcccchhHHHHHH
Confidence            9999995 45677999999999999999998876654 578999999999999999999999999998664 77889999


Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCC
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~  253 (321)
                      ++..++++|++|||+|+|++|++++|+|+++|+ +|++++++++|.++++++|++.++++.+  .++.+.+.+   +.+ 
T Consensus       159 l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~i~~~~--~~~~~~~~~---~~g-  231 (340)
T 3s2e_A          159 LKVTDTRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVAVNARD--TDPAAWLQK---EIG-  231 (340)
T ss_dssp             HHTTTCCTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEETTT--SCHHHHHHH---HHS-
T ss_pred             HHHcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCEEEeCCC--cCHHHHHHH---hCC-
Confidence            988999999999999999999999999999999 7999999999999999999999998754  466666655   224 


Q ss_pred             CccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehhHHHhh
Q 020768          254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFLIVL  316 (321)
Q Consensus       254 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~  316 (321)
                      ++|++||++|++..++.++++|+++|+++.+|......+++...++.|++++.|++.+....+
T Consensus       232 ~~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~  294 (340)
T 3s2e_A          232 GAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRGSIVGTRSDL  294 (340)
T ss_dssp             SEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCSSEEEEEHHHHHHTTCEEEECCSCCHHHH
T ss_pred             CCCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCCCCCCCCCHHHHHhCCeEEEEEecCCHHHH
Confidence            899999999998999999999999999999998777777888889999999999987655444

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=2.3e-51  Score=380.88  Aligned_cols=288  Identities=25%  Similarity=0.376  Sum_probs=250.5

Q ss_pred             chhhceeEEEccCC-CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCC
Q 020768           14 GEEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (321)
Q Consensus        14 ~~~~~~a~~~~~~~-~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v   92 (321)
                      .|++||++++.+++ .++++|+|.|+|+++||||||.+++||++|++++.|.++    ..+|.++|||++|+|+++|++|
T Consensus         6 ~p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~----~~~P~v~GhE~~G~V~~vG~~v   81 (373)
T 1p0f_A            6 KDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP----SKFPVILGHEAVGVVESIGAGV   81 (373)
T ss_dssp             SCEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC----CCSSBCCCCCEEEEEEEECTTC
T ss_pred             CcceeEEEEEEcCCCCeeEEEeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCC----CCCCcccCcCceEEEEEECCCC
Confidence            45679999998775 699999999999999999999999999999999987542    4579999999999999999999


Q ss_pred             CCCCCCCEEEEcCCccCCCCccccCCCCCCCCCcccc---cc-----------------CCCCCcceeEEEecCCcEEEC
Q 020768           93 KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT-----------------PPVHGSLANQVVHPADLCFKL  152 (321)
Q Consensus        93 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------------~~~~G~~~~~~~v~~~~~~~i  152 (321)
                      ++|++||+|++.+..+|++|++|+.+++++|.+....   +.                 ...+|+|+||++++++.++++
T Consensus        82 ~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~i  161 (373)
T 1p0f_A           82 TCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKI  161 (373)
T ss_dssp             CSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEE
T ss_pred             CccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccceeEEEEchhhEEEC
Confidence            9999999999999999999999999999999976431   11                 013599999999999999999


Q ss_pred             CCCCChhhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeE
Q 020768          153 PDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI  230 (321)
Q Consensus       153 p~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~v  230 (321)
                      |++++++ ||+++ ++.|||+++ +.+++++|++|||+|+|++|++++|+|+++|+++|++++++++|+++++++|++++
T Consensus       162 P~~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v  240 (373)
T 1p0f_A          162 DPKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATEC  240 (373)
T ss_dssp             CTTCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEE
T ss_pred             CCCCChh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEE
Confidence            9999999 88775 788999987 56899999999999999999999999999999779999999999999999999999


Q ss_pred             EecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccC-CEEEEEcCCCC--CccccchhhhccceEEEE
Q 020768          231 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHL--EMTVPLTPAAARYLIYSF  307 (321)
Q Consensus       231 i~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~k~~~i~g  307 (321)
                      +++.+...++.+.++++.   ++++|+|||++|.+..++.++++++++ |+++.+|....  ..+++...++.|+ ++.|
T Consensus       241 i~~~~~~~~~~~~i~~~t---~gg~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g  316 (373)
T 1p0f_A          241 LNPKDYDKPIYEVICEKT---NGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGR-SLKG  316 (373)
T ss_dssp             ECGGGCSSCHHHHHHHHT---TSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTC-EEEE
T ss_pred             EecccccchHHHHHHHHh---CCCCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCCCCccccCHHHhccCc-eEEe
Confidence            887542346766666542   348999999999888999999999999 99999997653  3456666777788 9999


Q ss_pred             eeh
Q 020768          308 LFH  310 (321)
Q Consensus       308 ~~~  310 (321)
                      ++.
T Consensus       317 ~~~  319 (373)
T 1p0f_A          317 SVF  319 (373)
T ss_dssp             CSG
T ss_pred             ecc
Confidence            865

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=2.2e-51  Score=381.50  Aligned_cols=291  Identities=26%  Similarity=0.403  Sum_probs=252.9

Q ss_pred             cchhhceeEEEccCC-CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCC
Q 020768           13 DGEEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE   91 (321)
Q Consensus        13 ~~~~~~~a~~~~~~~-~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~   91 (321)
                      ..|++||++++.+++ .++++++|.|+|+++||||||.+++||++|++++.|. +   ...+|.++|||++|+|+++|++
T Consensus         4 ~~p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-~---~~~~P~v~GhE~~G~V~~vG~~   79 (376)
T 1e3i_A            4 GKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-K---KALFPVVLGHECAGIVESVGPG   79 (376)
T ss_dssp             TSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTT-S---CCCSSBCCCCEEEEEEEEECTT
T ss_pred             CCChheeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEeEEeEchhhHHHhcCC-C---CCCCCcccCccccEEEEEECCC
Confidence            345679999998775 6999999999999999999999999999999988874 2   1467999999999999999999


Q ss_pred             CCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCcc----c---cccC-----------------CCCCcceeEEEecCC
Q 020768           92 VKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK----F---FATP-----------------PVHGSLANQVVHPAD  147 (321)
Q Consensus        92 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~-----------------~~~G~~~~~~~v~~~  147 (321)
                      |++|++||+|++.+..+|++|.+|+.+++++|.+..    +   .+..                 ...|+|+||++++++
T Consensus        80 v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~  159 (376)
T 1e3i_A           80 VTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEA  159 (376)
T ss_dssp             CCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGG
T ss_pred             CccCCCCCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCCccceeEEEeccc
Confidence            999999999999999999999999999999998754    1   0110                 125999999999999


Q ss_pred             cEEECCCCCChhhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHc
Q 020768          148 LCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL  225 (321)
Q Consensus       148 ~~~~ip~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~  225 (321)
                      .++++|+++++++||+++ ++.|||+++ +.+++++|++|||+|+|++|++++|+|+++|+++|++++++++|+++++++
T Consensus       160 ~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l  239 (376)
T 1e3i_A          160 NLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL  239 (376)
T ss_dssp             GEEECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT
T ss_pred             cEEECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh
Confidence            999999999999999776 788999987 568999999999999999999999999999997799999999999999999


Q ss_pred             CCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccC-CEEEEEcCCCCCccccchhhhccceE
Q 020768          226 GADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHLEMTVPLTPAAARYLI  304 (321)
Q Consensus       226 g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~k~~~  304 (321)
                      |++.++++.+...++.+.++++.   ++++|+|||++|++..++.++++++++ |+++.+|......+++...++.|+ +
T Consensus       240 Ga~~vi~~~~~~~~~~~~v~~~~---~~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~-~  315 (376)
T 1e3i_A          240 GATDCLNPRELDKPVQDVITELT---AGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVILGR-S  315 (376)
T ss_dssp             TCSEEECGGGCSSCHHHHHHHHH---TSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHHHHHTTC-E
T ss_pred             CCcEEEccccccchHHHHHHHHh---CCCccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCCCCccccCHHHhhccC-e
Confidence            99999887542346777666653   348999999999888899999999999 999999985445567777788888 9


Q ss_pred             EEEeehh
Q 020768          305 YSFLFHF  311 (321)
Q Consensus       305 i~g~~~~  311 (321)
                      +.|++..
T Consensus       316 i~g~~~~  322 (376)
T 1e3i_A          316 INGTFFG  322 (376)
T ss_dssp             EEECSGG
T ss_pred             EEEEecC
Confidence            9998753

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.3e-52  Score=385.71  Aligned_cols=297  Identities=26%  Similarity=0.419  Sum_probs=250.1

Q ss_pred             ccccchhhceeEEEccCC-CeEEEEecCCC-CCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEE
Q 020768           10 EKEDGEEVNMAAWLLGVN-TLKIQPFELPS-LGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK   87 (321)
Q Consensus        10 ~~~~~~~~~~a~~~~~~~-~l~~~e~~~p~-~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~   87 (321)
                      ++...+++||++++.+++ .++++|+|.|+ |+++||||||.++++|++|++.+.|.++......+|.++|||++|+|++
T Consensus         8 ~~~~~~~~mka~~~~~~g~~l~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~   87 (359)
T 1h2b_A            8 SQSLGVERLKAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEE   87 (359)
T ss_dssp             ---------CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEE
T ss_pred             hhcCChhhceEEEEecCCCCcEEEEccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCceEEEEE
Confidence            334457789999998774 79999999999 9999999999999999999999987542101136799999999999999


Q ss_pred             eCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhc---cc
Q 020768           88 VGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA---MC  164 (321)
Q Consensus        88 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa---~~  164 (321)
                      +|++|++|++||+|+..+..+|++|++|+.+++++|++...++. ..+|+|+||+++++++++++|+++++++||   .+
T Consensus        88 vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~l  166 (359)
T 1h2b_A           88 VAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGL-NIDGGFAEFMRTSHRSVIKLPKDISREKLVEMAPL  166 (359)
T ss_dssp             ECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTT-TBCCSSBSEEEECGGGEEECCTTCCHHHHHHTGGG
T ss_pred             ECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCcccccc-CCCCcccceEEechHhEEECCCCCCHHHHhhccch
Confidence            99999999999999998888999999999999999998766553 568999999999999999999999999998   33


Q ss_pred             h-hhHHHHHHHHH--cCCCCCCEEEEEcCChhHHHHHHHHHHc-CCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccH
Q 020768          165 E-PLSVGLHACRR--ANIGPETNVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI  240 (321)
Q Consensus       165 ~-~~~~a~~~l~~--~~~~~g~~vlI~Gag~vG~~a~qla~~~-g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~  240 (321)
                      . ++.|||++++.  +++++|++|||+|+|++|++++|+|+++ |+ +|++++++++|+++++++|+++++++.+  . +
T Consensus       167 ~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~--~-~  242 (359)
T 1h2b_A          167 ADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPA-TVIALDVKEEKLKLAERLGADHVVDARR--D-P  242 (359)
T ss_dssp             GTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCC-EEEEEESSHHHHHHHHHTTCSEEEETTS--C-H
T ss_pred             hhhHHHHHHHHHhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEeCCHHHHHHHHHhCCCEEEeccc--h-H
Confidence            3 56689999977  8999999999999999999999999999 99 7999999999999999999999998754  3 6


Q ss_pred             HHHHHHHHHHhCCCccEEEEcCCCHH--HHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehhHHHhh
Q 020768          241 AEEVEKIQKAMGTGIDVSFDCAGFNK--TMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFLIVL  316 (321)
Q Consensus       241 ~~~~~~~~~~~~~~~d~vid~~g~~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~  316 (321)
                      .+.++++.  .+.++|++||++|++.  .++.++++  ++|+++.+|....+ +++...++.|++++.|++.+....+
T Consensus       243 ~~~v~~~~--~g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~  315 (359)
T 1h2b_A          243 VKQVMELT--RGRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGEL-RFPTIRVISSEVSFEGSLVGNYVEL  315 (359)
T ss_dssp             HHHHHHHT--TTCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSCC-CCCHHHHHHTTCEEEECCSCCHHHH
T ss_pred             HHHHHHHh--CCCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCCC-CCCHHHHHhCCcEEEEecCCCHHHH
Confidence            66666542  2458999999999976  88888887  99999999976555 7787788999999999876544433

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=2.5e-52  Score=383.16  Aligned_cols=286  Identities=31%  Similarity=0.525  Sum_probs=254.9

Q ss_pred             ceeEEEccCCC-eEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768           18 NMAAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (321)
Q Consensus        18 ~~a~~~~~~~~-l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~   96 (321)
                      ||++++.+++. ++++|+|.|+|+++||||||.++++|++|++++.|.++......+|.++|||++|+|+++|++|++|+
T Consensus         1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~   80 (343)
T 2dq4_A            1 MRALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQ   80 (343)
T ss_dssp             CEEEEECSSSSSCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEEEEEECTTCCSSC
T ss_pred             CeEEEEeCCCCcEEEEeccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEEEEEECCCCCcCC
Confidence            79999987766 99999999999999999999999999999999987542100145799999999999999999999999


Q ss_pred             CCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHHHH-
Q 020768           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACR-  175 (321)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~-  175 (321)
                      +||+|++.+..+|++|.+|+.+++++|.+...++. ..+|+|+||++++++.++++|+++++++||++++++++|++++ 
T Consensus        81 vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~ta~~~l~~  159 (343)
T 2dq4_A           81 VGDHVSLESHIVCHACPACRTGNYHVCLNTQILGV-DRDGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAVHTVYA  159 (343)
T ss_dssp             TTCEEEECCEECCSCSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGEEEECTTSCHHHHTTHHHHHHHHHHHHS
T ss_pred             CCCEEEECCCCCCCCChhhhCcCcccCCCcceecC-CCCCcceeEEEEchHHeEECCCCCCHHHHHhhhHHHHHHHHHHH
Confidence            99999999999999999999999999998876653 4679999999999999999999999999998889999999998 


Q ss_pred             HcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCc
Q 020768          176 RANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (321)
Q Consensus       176 ~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~  255 (321)
                      .+++ +|++|||+|+|++|++++|+|+.+|+++|+++++++++.++++++ ++.++++.+  .++.+.++++.   +.++
T Consensus       160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~--~~~~~~~~~~~---~~g~  232 (343)
T 2dq4_A          160 GSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLE--EDLLEVVRRVT---GSGV  232 (343)
T ss_dssp             TTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTTT--SCHHHHHHHHH---SSCE
T ss_pred             hCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcCc--cCHHHHHHHhc---CCCC
Confidence            7889 999999999999999999999999996699999999999999999 999888654  46776666652   6789


Q ss_pred             cEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccc-hhhhccceEEEEeehh
Q 020768          256 DVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPL-TPAAARYLIYSFLFHF  311 (321)
Q Consensus       256 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~k~~~i~g~~~~  311 (321)
                      |++||++|+...++.++++|+++|+++.+|......+++. ..++.|++++.|+..+
T Consensus       233 D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~  289 (343)
T 2dq4_A          233 EVLLEFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGR  289 (343)
T ss_dssp             EEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCEEECHHHHTGGGTCEEEECCSC
T ss_pred             CEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCceeCcHHHHHhCceEEEEeecC
Confidence            9999999987889999999999999999998766667887 7789999999998654

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=8.3e-52  Score=383.64  Aligned_cols=286  Identities=25%  Similarity=0.385  Sum_probs=251.3

Q ss_pred             hhceeEEEccCC-CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768           16 EVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (321)
Q Consensus        16 ~~~~a~~~~~~~-~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~   94 (321)
                      ++||++++.+++ .++++|+|.|+|+++||||||.+++||++|++++.|.++    ..+|.++|||++|+|+++|++|++
T Consensus         5 ~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~----~~~P~v~GhE~~G~V~~vG~~v~~   80 (371)
T 1f8f_A            5 KDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP----VPLPAVLGHEGSGIIEAIGPNVTE   80 (371)
T ss_dssp             EEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC----CCSSBCCCCEEEEEEEEECTTCCS
T ss_pred             ccceEEEEcCCCCCeEEEEecCCCCCCCEEEEEEEEeecCchhHHHHcCCCC----CCCCcccCcccceEEEEeCCCCCC
Confidence            469999998765 699999999999999999999999999999999987542    457999999999999999999999


Q ss_pred             CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccc----------------c------CCCCCcceeEEEecCCcEEEC
Q 020768           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA----------------T------PPVHGSLANQVVHPADLCFKL  152 (321)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~------~~~~G~~~~~~~v~~~~~~~i  152 (321)
                      |++||+|++.+ .+|++|++|+.+++++|.+...++                +      ...+|+|+||++++++.++++
T Consensus        81 ~~~GdrV~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~~~i  159 (371)
T 1f8f_A           81 LQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKV  159 (371)
T ss_dssp             CCTTCEEEECC-CCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEE
T ss_pred             CCCCCEEEecC-CCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEEechhheEEC
Confidence            99999999999 999999999999999998764211                0      013599999999999999999


Q ss_pred             CCCCChhhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeE
Q 020768          153 PDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI  230 (321)
Q Consensus       153 p~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~v  230 (321)
                      |+++++++||.++ ++.|||+++ +.+++++|++|||+|+|++|++++|+|+++|+++|++++++++|.++++++|++.+
T Consensus       160 P~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v  239 (371)
T 1f8f_A          160 TKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHV  239 (371)
T ss_dssp             CTTSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEE
T ss_pred             CCCCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEE
Confidence            9999999998776 888999998 57899999999999999999999999999999779999999999999999999999


Q ss_pred             EecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC--CccccchhhhccceEEEEe
Q 020768          231 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL--EMTVPLTPAAARYLIYSFL  308 (321)
Q Consensus       231 i~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~k~~~i~g~  308 (321)
                      +++.+  .++.+.++++.   ++++|+|||++|.+..++.++++|+++|+++.+|....  ..+++...++.|++++.|+
T Consensus       240 i~~~~--~~~~~~~~~~~---~gg~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~  314 (371)
T 1f8f_A          240 INSKT--QDPVAAIKEIT---DGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGV  314 (371)
T ss_dssp             EETTT--SCHHHHHHHHT---TSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEEC
T ss_pred             ecCCc--cCHHHHHHHhc---CCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCCCCccccCHHHHHhCCCEEEEe
Confidence            98654  46666665542   33899999999988889999999999999999997653  3567777888999999998


Q ss_pred             ehh
Q 020768          309 FHF  311 (321)
Q Consensus       309 ~~~  311 (321)
                      +..
T Consensus       315 ~~~  317 (371)
T 1f8f_A          315 VEG  317 (371)
T ss_dssp             SGG
T ss_pred             CCC
Confidence            754

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=1.2e-51  Score=378.90  Aligned_cols=291  Identities=25%  Similarity=0.390  Sum_probs=254.3

Q ss_pred             ceeEEEccCCC-eEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768           18 NMAAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (321)
Q Consensus        18 ~~a~~~~~~~~-l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~   96 (321)
                      |||+++.+++. ++++|+|.|+|+++||||||.++++|++|+++++|... .....+|.++|||++|+|+++|++|++|+
T Consensus         1 MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~~~p~i~G~e~~G~V~~vG~~v~~~~   79 (345)
T 3jv7_A            1 MKAVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAA-QYAYGLPLTLGHEGVGTVAELGEGVTGFG   79 (345)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTT-TCCSCSSEECCSEEEEEEEEECTTCCSCC
T ss_pred             CeEEEEcCCCCceEEEEecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-ccCCCCCcccCcccEEEEEEECCCCCCCC
Confidence            89999998765 99999999999999999999999999999999988643 22256799999999999999999999999


Q ss_pred             CCCEEEEcCCccCCCCccccCCCCCCCCCcccc----ccCCCCCcceeEEEec-CCcEEECCCCCChhhhccc-hhhHHH
Q 020768           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF----ATPPVHGSLANQVVHP-ADLCFKLPDNVSLEEGAMC-EPLSVG  170 (321)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~G~~~~~~~v~-~~~~~~ip~~~~~~~aa~~-~~~~~a  170 (321)
                      +||+|++.+..+|++|.+|+.+++++|.+....    .+...+|+|+||++++ ++.++++|+ +++++||.+ .++.||
T Consensus        80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~~p~-~~~~~aa~l~~~~~ta  158 (345)
T 3jv7_A           80 VGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIGD-LDPVAAAPLTDAGLTP  158 (345)
T ss_dssp             TTCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBCCSSBSEEEESCGGGEEECTT-CCHHHHGGGGTTTHHH
T ss_pred             CCCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcCCCceeeEEEEecchhceEeCCC-CCHHHhhhhhhhHHHH
Confidence            999999999999999999999999999433222    1234689999999999 999999999 999999855 488999


Q ss_pred             HHHHHHc--CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHH
Q 020768          171 LHACRRA--NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQ  248 (321)
Q Consensus       171 ~~~l~~~--~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~  248 (321)
                      |++++..  .+++|++|||+|+|++|++++|+|+++|..+|++++++++|+++++++|++.++++++   ++.+.++++.
T Consensus       159 ~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~---~~~~~v~~~t  235 (345)
T 3jv7_A          159 YHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGA---GAADAIRELT  235 (345)
T ss_dssp             HHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECST---THHHHHHHHH
T ss_pred             HHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCC---cHHHHHHHHh
Confidence            9999875  8999999999999999999999999995558999999999999999999999998643   6666666653


Q ss_pred             HHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-CccccchhhhccceEEEEeehhHHHhh
Q 020768          249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARYLIYSFLFHFFLIVL  316 (321)
Q Consensus       249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~~~~~~  316 (321)
                        .+.++|+|||++|++..++.++++|+++|+++.+|...+ ..++++ .++.|++++.|++.+....+
T Consensus       236 --~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~~  301 (345)
T 3jv7_A          236 --GGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGF-FMIPFGASVVTPYWGTRSEL  301 (345)
T ss_dssp             --GGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTCCEEEST-TTSCTTCEEECCCSCCHHHH
T ss_pred             --CCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCcCH-HHHhCCCEEEEEecCCHHHH
Confidence              356899999999998799999999999999999998766 667776 78899999999987654433

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=2.8e-51  Score=380.37  Aligned_cols=292  Identities=24%  Similarity=0.351  Sum_probs=252.8

Q ss_pred             cchhhceeEEEccCC-CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCC
Q 020768           13 DGEEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE   91 (321)
Q Consensus        13 ~~~~~~~a~~~~~~~-~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~   91 (321)
                      +.|++||++++.+++ .++++++|.|+|+++||||||.+++||++|++++.|..+.   ..+|.++|||++|+|+++|++
T Consensus         2 ~~p~~mkA~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~P~v~GhE~~G~V~~vG~~   78 (373)
T 2fzw_A            2 NEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPE---GCFPVILGHLGAGIVESVGEG   78 (373)
T ss_dssp             CCCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTT---CCSSBCCCCEEEEEEEEECTT
T ss_pred             CCccceEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCCC---CCCCccccccccEEEEEECCC
Confidence            356789999998775 6999999999999999999999999999999999875431   357999999999999999999


Q ss_pred             CCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCcccc---cc-----------------CCCCCcceeEEEecCCcEEE
Q 020768           92 VKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT-----------------PPVHGSLANQVVHPADLCFK  151 (321)
Q Consensus        92 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------------~~~~G~~~~~~~v~~~~~~~  151 (321)
                      |++|++||+|++.+..+|++|.+|+.+++++|.+....   +.                 ...+|+|+||++++++.+++
T Consensus        79 V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~  158 (373)
T 2fzw_A           79 VTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAK  158 (373)
T ss_dssp             CCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEE
T ss_pred             CCCCCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeEEEEchhheEE
Confidence            99999999999999899999999999999999875421   10                 01359999999999999999


Q ss_pred             CCCCCChhhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCe
Q 020768          152 LPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN  229 (321)
Q Consensus       152 ip~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~  229 (321)
                      +|+++++++||+++ ++.|||+++ +.+++++|++|||+|+|++|++++|+|+++|+++|++++++++|.++++++|++.
T Consensus       159 iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~  238 (373)
T 2fzw_A          159 IDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATE  238 (373)
T ss_dssp             CCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSE
T ss_pred             CCCCCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCce
Confidence            99999999999876 788999987 5689999999999999999999999999999977999999999999999999999


Q ss_pred             EEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccC-CEEEEEcCCCC--CccccchhhhccceEEE
Q 020768          230 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHL--EMTVPLTPAAARYLIYS  306 (321)
Q Consensus       230 vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~k~~~i~  306 (321)
                      ++++.+...++.+.++++.   ++++|+|||++|....++.++++|+++ |+++.+|....  ..+++...++.|+ ++.
T Consensus       239 vi~~~~~~~~~~~~v~~~~---~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~  314 (373)
T 2fzw_A          239 CINPQDFSKPIQEVLIEMT---DGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGR-TWK  314 (373)
T ss_dssp             EECGGGCSSCHHHHHHHHT---TSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTC-EEE
T ss_pred             EeccccccccHHHHHHHHh---CCCCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCCCceeeeCHHHHhcCC-EEE
Confidence            9886542345666666542   348999999999888899999999999 99999997654  3466667788888 999


Q ss_pred             Eeehh
Q 020768          307 FLFHF  311 (321)
Q Consensus       307 g~~~~  311 (321)
                      |++.+
T Consensus       315 g~~~~  319 (373)
T 2fzw_A          315 GTAFG  319 (373)
T ss_dssp             ECSGG
T ss_pred             EeccC
Confidence            98754

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=6.4e-51  Score=378.08  Aligned_cols=290  Identities=24%  Similarity=0.370  Sum_probs=252.1

Q ss_pred             chhhceeEEEccCC-CeEEEEecCCCCCCCcEEEEEeEeecccccHh-hhhccccCCcCCCCCcccccceeEEEEEeCCC
Q 020768           14 GEEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVH-YLKTLRCADFVVKEPMVIGHECAGVIEKVGSE   91 (321)
Q Consensus        14 ~~~~~~a~~~~~~~-~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~-~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~   91 (321)
                      .|++||++++.+++ .++++++|.|+|+++||||||.+++||++|++ ++.|..+    ..+|.++|||++|+|+++|++
T Consensus         5 ~~~~mka~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~----~~~P~v~GhE~~G~V~~vG~~   80 (374)
T 1cdo_A            5 KVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK----DGFPVVLGHEGAGIVESVGPG   80 (374)
T ss_dssp             SCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT----TSCSEECCCCEEEEEEEECTT
T ss_pred             CcceeEEEEEecCCCCeEEEEeeCCCCCCCEEEEEEeEEeechhhHHHHhCCCCC----CCCCcccCccceEEEEEECCC
Confidence            34679999998775 69999999999999999999999999999999 8887542    457999999999999999999


Q ss_pred             CCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCcccc---ccC-----------------CCCCcceeEEEecCCcEEE
Q 020768           92 VKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---ATP-----------------PVHGSLANQVVHPADLCFK  151 (321)
Q Consensus        92 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----------------~~~G~~~~~~~v~~~~~~~  151 (321)
                      |++|++||+|++.+..+|++|.+|+.+++++|.+....   +..                 ..+|+|+||++++++.+++
T Consensus        81 V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~  160 (374)
T 1cdo_A           81 VTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAK  160 (374)
T ss_dssp             CCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEE
T ss_pred             CccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCccceeEEEEchhheEE
Confidence            99999999999999899999999999999999876532   110                 1259999999999999999


Q ss_pred             CCCCCChhhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCe
Q 020768          152 LPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN  229 (321)
Q Consensus       152 ip~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~  229 (321)
                      +|+++++++||+++ ++.|||+++ +.+++++|++|||+|+|++|++++|+|+++|+.+|++++++++|.++++++|++.
T Consensus       161 ~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~  240 (374)
T 1cdo_A          161 IDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATD  240 (374)
T ss_dssp             CCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCE
T ss_pred             CCCCCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCce
Confidence            99999999999876 788999987 5689999999999999999999999999999977999999999999999999999


Q ss_pred             EEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccC-CEEEEEcCCCC-CccccchhhhccceEEEE
Q 020768          230 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHL-EMTVPLTPAAARYLIYSF  307 (321)
Q Consensus       230 vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g  307 (321)
                      ++++.+...++.+.++++.   ++++|++||++|.+..++.++++|+++ |+++.+|.... ..+++...++.|+ ++.|
T Consensus       241 vi~~~~~~~~~~~~~~~~~---~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~-~i~g  316 (374)
T 1cdo_A          241 FVNPNDHSEPISQVLSKMT---NGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGR-TWKG  316 (374)
T ss_dssp             EECGGGCSSCHHHHHHHHH---TSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTC-EEEE
T ss_pred             EEeccccchhHHHHHHHHh---CCCCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCCCCcccCHHHHhcCC-eEEE
Confidence            9887542346776666653   348999999999888899999999999 99999997654 4566777788888 9999


Q ss_pred             eehh
Q 020768          308 LFHF  311 (321)
Q Consensus       308 ~~~~  311 (321)
                      ++..
T Consensus       317 ~~~~  320 (374)
T 1cdo_A          317 SMFG  320 (374)
T ss_dssp             CSGG
T ss_pred             EecC
Confidence            8753

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=6.4e-51  Score=378.05  Aligned_cols=289  Identities=26%  Similarity=0.376  Sum_probs=251.2

Q ss_pred             hhhceeEEEccCC-CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCC
Q 020768           15 EEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (321)
Q Consensus        15 ~~~~~a~~~~~~~-~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~   93 (321)
                      |++||++++.+++ .++++++|.|+|+++||||||.+++||++|++++.|..+    ..+|.++|||++|+|+++|++|+
T Consensus         6 ~~~mkA~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~----~~~P~v~GhE~~G~V~~vG~~v~   81 (374)
T 2jhf_A            6 VIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLV----TPLPVIAGHEAAGIVESIGEGVT   81 (374)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSC----CCSSBCCCCSEEEEEEEECTTCC
T ss_pred             ceeEEEEEEecCCCceEEEEccCCCCCCCeEEEEEeEEeechhhHHHHcCCCC----CCCCcccCcCceEEEEEECCCCC
Confidence            4679999998775 699999999999999999999999999999999987542    23799999999999999999999


Q ss_pred             CCCCCCEEEEcCCccCCCCccccCCCCCCCCCcccc---ccC-----------------CCCCcceeEEEecCCcEEECC
Q 020768           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---ATP-----------------PVHGSLANQVVHPADLCFKLP  153 (321)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----------------~~~G~~~~~~~v~~~~~~~ip  153 (321)
                      +|++||+|++.+..+|++|++|+.+++++|.+....   +..                 ..+|+|+||++++++.++++|
T Consensus        82 ~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP  161 (374)
T 2jhf_A           82 TVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKID  161 (374)
T ss_dssp             SCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECC
T ss_pred             CCCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeEEEEchHHeEECC
Confidence            999999999999999999999999999999976532   110                 135999999999999999999


Q ss_pred             CCCChhhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEE
Q 020768          154 DNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV  231 (321)
Q Consensus       154 ~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi  231 (321)
                      +++++++||+++ ++.|||+++ +.+++++|++|||+|+|++|++++|+|+++|+++|++++++++|.++++++|++.++
T Consensus       162 ~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi  241 (374)
T 2jhf_A          162 AASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV  241 (374)
T ss_dssp             TTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEE
T ss_pred             CCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEe
Confidence            999999999876 788999987 568999999999999999999999999999997799999999999999999999998


Q ss_pred             ecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccC-CEEEEEcCCCC--CccccchhhhccceEEEEe
Q 020768          232 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHL--EMTVPLTPAAARYLIYSFL  308 (321)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~k~~~i~g~  308 (321)
                      ++.+...++.+.++++.   ++++|+|||++|.+..++.++++++++ |+++.+|....  ..+++...++.|+ ++.|+
T Consensus       242 ~~~~~~~~~~~~~~~~~---~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~  317 (374)
T 2jhf_A          242 NPQDYKKPIQEVLTEMS---NGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGR-TWKGA  317 (374)
T ss_dssp             CGGGCSSCHHHHHHHHT---TSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTC-EEEEC
T ss_pred             cccccchhHHHHHHHHh---CCCCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCccccCHHHHhcCC-eEEEe
Confidence            87542345666666542   348999999999888999999999999 99999997653  3466777788888 99998


Q ss_pred             ehh
Q 020768          309 FHF  311 (321)
Q Consensus       309 ~~~  311 (321)
                      +..
T Consensus       318 ~~~  320 (374)
T 2jhf_A          318 IFG  320 (374)
T ss_dssp             SGG
T ss_pred             ccC
Confidence            753

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=3.8e-51  Score=376.64  Aligned_cols=285  Identities=26%  Similarity=0.367  Sum_probs=250.2

Q ss_pred             ceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHh-hhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVH-YLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (321)
Q Consensus        18 ~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~-~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~   96 (321)
                      |||+++.+++.++++|+|.|+|+++||||||+++++|++|++ ++.|...    ..+|.++|||++|+|+++|++|++|+
T Consensus         1 MkA~~~~~~~~~~~~e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~----~~~p~v~G~E~~G~V~~vG~~v~~~~   76 (352)
T 3fpc_A            1 MKGFAMLSIGKVGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIG----ERHNMILGHEAVGEVVEVGSEVKDFK   76 (352)
T ss_dssp             CEEEEEEETTEEEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTC----CCSSEECCCEEEEEEEEECTTCCSCC
T ss_pred             CeEEEEccCCCceEEeCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCCC----CCCCcccCCcceEEEEEECCCCCcCC
Confidence            899999999999999999999999999999999999999999 5566542    46799999999999999999999999


Q ss_pred             CCCEEEEcCCccCCCCccccCCCCCCCCCccc--cccCCCCCcceeEEEecCC--cEEECCCCCChhhhccc-hhhHHHH
Q 020768           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKF--FATPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMC-EPLSVGL  171 (321)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~G~~~~~~~v~~~--~~~~ip~~~~~~~aa~~-~~~~~a~  171 (321)
                      +||+|++.+..+|+.|.+|+.+++++|.....  ..+...+|+|+||+++++.  .++++|+++++++||++ .+++|||
T Consensus        77 vGdrV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~  156 (352)
T 3fpc_A           77 PGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGF  156 (352)
T ss_dssp             TTCEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBCCSSBSCEEESSHHHHCEECCTTSCHHHHTTTTTHHHHHH
T ss_pred             CCCEEEEccccCCCCchhhcCCCcCCccccccccccccCCCCcccceEEeccccCeEEECCCCCCHHHHhhccchhHHHH
Confidence            99999999999999999999999988875421  1123468999999999976  99999999999999977 4889999


Q ss_pred             HHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768          172 HACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       172 ~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      ++++.+++++|++|||+|+|++|++++|+|+++|+++|++++++++|+++++++|+++++++++  .++.+.++++.  .
T Consensus       157 ~al~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~--~~~~~~v~~~t--~  232 (352)
T 3fpc_A          157 HGAELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKN--GDIVEQILKAT--D  232 (352)
T ss_dssp             HHHHHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGG--SCHHHHHHHHT--T
T ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCC--cCHHHHHHHHc--C
Confidence            9999999999999999999999999999999999977999999999999999999999988654  56777766653  3


Q ss_pred             CCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchh----hhccceEEEEeeh
Q 020768          252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTP----AAARYLIYSFLFH  310 (321)
Q Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~k~~~i~g~~~  310 (321)
                      +.++|+|||++|++..++.++++|+++|+++.+|......++++..    ++++++++.|++.
T Consensus       233 g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~  295 (352)
T 3fpc_A          233 GKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLC  295 (352)
T ss_dssp             TCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCC
T ss_pred             CCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCCCceecchhHhhhhccccEEEEeec
Confidence            6689999999999889999999999999999999776554444443    3468999999875

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=1e-51  Score=379.92  Aligned_cols=284  Identities=21%  Similarity=0.253  Sum_probs=246.6

Q ss_pred             chhhceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCC
Q 020768           14 GEEVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (321)
Q Consensus        14 ~~~~~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v   92 (321)
                      |+++||++++.++ +.++++|+|.|+|+++||||||.++++|++|++++.|....   ..+|.++|||++|+|+++|++|
T Consensus         1 M~m~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~p~i~G~E~~G~V~~vG~~v   77 (348)
T 3two_A            1 MRVQSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKE---GIYPMIPGHEIAGIIKEVGKGV   77 (348)
T ss_dssp             CCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSSC---CCSSBCCCCCEEEEEEEECTTC
T ss_pred             CceEEEEEEEccCCCCCeEEEeeCCCCCCCeEEEEEEEeeecccchhhhcCCCCC---CCCCeecCcceeEEEEEECCCC
Confidence            3467999999876 57999999999999999999999999999999999886532   4679999999999999999999


Q ss_pred             CCCCCCCEEEEcCC-ccCCCCccccCCCCCCCCCccccccC---------CCCCcceeEEEecCCcEEECCCCCChhhhc
Q 020768           93 KTLVPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFATP---------PVHGSLANQVVHPADLCFKLPDNVSLEEGA  162 (321)
Q Consensus        93 ~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa  162 (321)
                      ++|++||+|++.+. .+|++|.+|+.+++++|. ....+..         ..+|+|+||+++++++++++|+++++++||
T Consensus        78 ~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~-~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa  156 (348)
T 3two_A           78 KKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCT-KVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVA  156 (348)
T ss_dssp             CSCCTTCEEEECSEEECCSCSHHHHTTCGGGCT-TCEESSSSEEGGGTTEECCCSSBSEEEEEGGGCEECCTTSCHHHHG
T ss_pred             CCCCCCCEEEEeCCcCCCCCChhHhCCCcccCc-ccccccccccccccCCcCCccccceEEechhhEEECCCCCCHHHhh
Confidence            99999999998764 589999999999999998 3332221         124999999999999999999999999999


Q ss_pred             cch-hhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHH
Q 020768          163 MCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA  241 (321)
Q Consensus       163 ~~~-~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~  241 (321)
                      .++ .+.|||++++..++++|++|||+|+|++|++++|+|+++|+ +|++++.+++|.++++++|++.++ .  +...+ 
T Consensus       157 ~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v~-~--~~~~~-  231 (348)
T 3two_A          157 PLLCAGITTYSPLKFSKVTKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSMGVKHFY-T--DPKQC-  231 (348)
T ss_dssp             GGGTHHHHHHHHHHHTTCCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHHTTCSEEE-S--SGGGC-
T ss_pred             hhhhhHHHHHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCeec-C--CHHHH-
Confidence            665 67889999988899999999999999999999999999999 799999999999999999999987 2  11111 


Q ss_pred             HHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCC-CCcc-ccchhhh-ccceEEEEeehhHHHhh
Q 020768          242 EEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-LEMT-VPLTPAA-ARYLIYSFLFHFFLIVL  316 (321)
Q Consensus       242 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~-~~~~~~~-~k~~~i~g~~~~~~~~~  316 (321)
                                ..++|+|||++|++..++.++++|+++|+++.+|... ...+ ++...++ .|++++.|++.+.+..+
T Consensus       232 ----------~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~  299 (348)
T 3two_A          232 ----------KEELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGGIKET  299 (348)
T ss_dssp             ----------CSCEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGGCCEEEHHHHHHTCSCEEEECCSCCHHHH
T ss_pred             ----------hcCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCCcccCCHHHHHhhCCeEEEEEecCCHHHH
Confidence                      2289999999998768999999999999999999876 5555 7877777 99999999987665443

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=1.1e-50  Score=371.59  Aligned_cols=288  Identities=32%  Similarity=0.411  Sum_probs=253.8

Q ss_pred             ceeEEEccCC-CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768           18 NMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (321)
Q Consensus        18 ~~a~~~~~~~-~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~   96 (321)
                      ||++++.+++ .++++|+|.|+|+++||+|||.+++||++|++.+.|.++.  ...+|.++|||++|+|+++|++|++|+
T Consensus         1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~v~GhE~~G~V~~vG~~v~~~~   78 (339)
T 1rjw_A            1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPV--KPKLPLIPGHEGVGIVEEVGPGVTHLK   78 (339)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSS--CCCSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred             CeEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCCc--CCCCCeeccccceEEEEEECCCCCcCC
Confidence            7899998776 7999999999999999999999999999999998875431  245799999999999999999999999


Q ss_pred             CCCEEEEcCCc-cCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHHH
Q 020768           97 PGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC  174 (321)
Q Consensus        97 ~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l  174 (321)
                      +||+|++.+.. .|++|++|+.+++++|.+....+. ..+|+|+||+++++++++++|+++++++||.++ ++.|||+++
T Consensus        79 vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l  157 (339)
T 1rjw_A           79 VGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGY-SVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKAL  157 (339)
T ss_dssp             TTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHHHHHHHH
T ss_pred             CCCEEEEecCCCCCCCCchhhCcCcccCCCcceeec-CCCCcceeeEEechHHEEECCCCCCHHHhhhhhhhHHHHHHHH
Confidence            99999987654 599999999999999998776653 568999999999999999999999999988665 677899999


Q ss_pred             HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCC
Q 020768          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~  254 (321)
                      +..++++|++|||+|+|++|++++|+|+.+|+ +|+++++++++.++++++|++.++++.+  .++.+.+.++.    .+
T Consensus       158 ~~~~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~d~~~--~~~~~~~~~~~----~~  230 (339)
T 1rjw_A          158 KVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNPLK--EDAAKFMKEKV----GG  230 (339)
T ss_dssp             HHHTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECTTT--SCHHHHHHHHH----SS
T ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEecCCC--ccHHHHHHHHh----CC
Confidence            88899999999999998899999999999999 7999999999999999999999887653  46666665542    58


Q ss_pred             ccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehhHHHh
Q 020768          255 IDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFLIV  315 (321)
Q Consensus       255 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~  315 (321)
                      +|++||++|.+..++.++++|+++|+++.+|...+..+++...++.|++++.|+..+....
T Consensus       231 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~  291 (339)
T 1rjw_A          231 VHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKD  291 (339)
T ss_dssp             EEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHHH
T ss_pred             CCEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCCccCHHHHHhCCcEEEEeccCCHHH
Confidence            9999999998789999999999999999999876666777777889999999987655443

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=8.2e-51  Score=373.76  Aligned_cols=291  Identities=24%  Similarity=0.377  Sum_probs=260.3

Q ss_pred             ceeEEEcc--CCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCC
Q 020768           18 NMAAWLLG--VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (321)
Q Consensus        18 ~~a~~~~~--~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~   95 (321)
                      |||+++..  ++.++++|+|.|+|+|+||||||.+++||++|+++++|.+.    .++|.++|||++|+|+++|++|++|
T Consensus         1 MKA~v~~~~~~~~~~l~e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~~~----~~~p~i~GhE~aG~V~~vG~~V~~~   76 (348)
T 4eez_A            1 MKAAVVRHNPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFG----NKAGTVLGHEGIGIVKEIGADVSSL   76 (348)
T ss_dssp             CEEEEECSSCCSSEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTTTC----CCTTCBCCSEEEEEEEEECTTCCSC
T ss_pred             CeEEEEEcCCCCcEEEEEeECCCCCCCEEEEEEEEEEECHHHHHHhcCCCC----CCCCcccceeEEEEEEEECceeeec
Confidence            89999863  46799999999999999999999999999999999998653    4679999999999999999999999


Q ss_pred             CCCCEEEEcCCc-cCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHH
Q 020768           96 VPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (321)
Q Consensus        96 ~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~  173 (321)
                      ++||+|.+.+.. .|+.|.+|..+..++|......+. ..+|+|+||+.++++.++++|+++++++||+++ ++.|+|++
T Consensus        77 ~~GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~G~~ae~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~  155 (348)
T 4eez_A           77 QVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGY-SVDGGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKA  155 (348)
T ss_dssp             CTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGSCBCCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             ccCCeEeecccccccCccccccCCccccccccccccc-ccCCcceeeccccccceeecCCCCCHHHHhhcccceeeEEee
Confidence            999999987655 789999999999999998776554 578999999999999999999999999998765 67789999


Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCC
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~  253 (321)
                      ++.+++++|++|||+|+|++|.+++|+|+.++..+|++++++++|+++++++|++.++++.+  .++.+.+.++  +.+.
T Consensus       156 l~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~--~~~~~~v~~~--t~g~  231 (348)
T 4eez_A          156 IKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGD--VNPVDEIKKI--TGGL  231 (348)
T ss_dssp             HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-C--CCHHHHHHHH--TTSS
T ss_pred             ecccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCC--CCHHHHhhhh--cCCC
Confidence            99899999999999999999999999999876668999999999999999999999999754  5677777665  3477


Q ss_pred             CccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehhHHHhhc
Q 020768          254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFLIVLG  317 (321)
Q Consensus       254 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~  317 (321)
                      ++|.++|+++++..+..++++++++|+++.+|......+++...+++|++++.|++.++...+.
T Consensus       232 g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~gs~~~~~~~~~  295 (348)
T 4eez_A          232 GVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLA  295 (348)
T ss_dssp             CEEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSCEEEECHHHHHHSCCEEEECCSCCHHHHH
T ss_pred             CceEEEEeccCcchhheeheeecCCceEEEEeccCCCCccCHHHHHhCCeEEEEEecCCHHHHH
Confidence            8999999999999999999999999999999988777888999999999999999887655443

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=3.8e-51  Score=377.31  Aligned_cols=283  Identities=19%  Similarity=0.276  Sum_probs=249.0

Q ss_pred             ceeEEEccCCC-eEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCC---CcccccceeEEEEEeCCCCC
Q 020768           18 NMAAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE---PMVIGHECAGVIEKVGSEVK   93 (321)
Q Consensus        18 ~~a~~~~~~~~-l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~---p~~~G~e~vG~V~~vG~~v~   93 (321)
                      |||+++.+++. ++++++|.|+|+++||||||.+++||++|++++.|.++.   ..+   |.++|||++| |+++|++ +
T Consensus         1 MkA~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~~~~p~v~G~E~~G-V~~vG~~-~   75 (357)
T 2b5w_A            1 MKAIAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGG---FPEGEDHLVLGHEAVG-VVVDPND-T   75 (357)
T ss_dssp             CEEEEEETTCSSCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTT---SCTTCSEEECCSEEEE-EEEECTT-S
T ss_pred             CeEEEEeCCCCceEEEECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCC---CCCCCCCcccCceeEE-EEEECCC-C
Confidence            79999988777 999999999999999999999999999999999875421   345   8999999999 9999999 9


Q ss_pred             CCCCCCEEEEcCCcc--CCCCccccCCCCCCCCCcccc--ccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHH
Q 020768           94 TLVPGDRVALEPGIS--CWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV  169 (321)
Q Consensus        94 ~~~~Gd~V~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~  169 (321)
                      +|++||+|++.+..+  |++|++|+.+++++|.+..++  +....+|+|+||++++++.++++|++++ ++|++..+++|
T Consensus        76 ~~~vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~-~~aal~~~~~t  154 (357)
T 2b5w_A           76 ELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQA-ELGFLIEPISI  154 (357)
T ss_dssp             SCCTTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTBEECCSCBSEEEEEGGGEEECCGGGS-TTGGGHHHHHH
T ss_pred             CCCCCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccccCccCCCcceeeEEEEchHHeEECCCCcc-hhhhhhchHHH
Confidence            999999999988777  999999999999999988765  4223579999999999999999999999 77777779999


Q ss_pred             HHHHHHHcCCCCC------CEEEEEcCChhHHHH-HHHH-HHcCCCeEEEEeCChh---HHHHHHHcCCCeEEecCCCcc
Q 020768          170 GLHACRRANIGPE------TNVLIMGAGPIGLVT-MLGA-RAFGAPRIVIVDVDDY---RLSVAKELGADNIVKVSTNLQ  238 (321)
Q Consensus       170 a~~~l~~~~~~~g------~~vlI~Gag~vG~~a-~qla-~~~g~~~vv~v~~~~~---~~~~~~~~g~~~vi~~~~~~~  238 (321)
                      ||++++.+++++|      ++|||+|+|++|+++ +|+| +++|+++|++++++++   |.++++++|++.+ ++.+  .
T Consensus       155 a~~al~~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v-~~~~--~  231 (357)
T 2b5w_A          155 TEKALEHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV-DSRQ--T  231 (357)
T ss_dssp             HHHHHHHHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE-ETTT--S
T ss_pred             HHHHHHhcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc-CCCc--c
Confidence            9999988889999      999999999999999 9999 9999966999999998   9999999999988 7653  4


Q ss_pred             cHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCC-CCccccchhh----hccceEEEEeehhHH
Q 020768          239 DIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-LEMTVPLTPA----AARYLIYSFLFHFFL  313 (321)
Q Consensus       239 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~----~~k~~~i~g~~~~~~  313 (321)
                      ++.+ ++++   .+ ++|+|||++|++..++.++++++++|+++.+|... ...+++...+    +.|++++.|+..+..
T Consensus       232 ~~~~-i~~~---~g-g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  306 (357)
T 2b5w_A          232 PVED-VPDV---YE-QMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMVLHNKALVGSVNSHV  306 (357)
T ss_dssp             CGGG-HHHH---SC-CEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHTTCEEEECCCCCH
T ss_pred             CHHH-HHHh---CC-CCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCCCCceecHHHHhHHHHhCCeEEEEeccCCH
Confidence            5555 5554   24 89999999999778999999999999999999776 5567777777    899999999876543


Q ss_pred             H
Q 020768          314 I  314 (321)
Q Consensus       314 ~  314 (321)
                      .
T Consensus       307 ~  307 (357)
T 2b5w_A          307 E  307 (357)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.7e-50  Score=370.25  Aligned_cols=294  Identities=22%  Similarity=0.276  Sum_probs=256.3

Q ss_pred             chhhceeEEEccCC-CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCC
Q 020768           14 GEEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (321)
Q Consensus        14 ~~~~~~a~~~~~~~-~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v   92 (321)
                      +|.+||++++.+++ .++++++|.|+|+++||||||.+++||++|++.+.|.++.  ...+|.++|||++|+|+++|++|
T Consensus         2 ~p~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~v~G~E~~G~V~~vG~~v   79 (347)
T 2hcy_A            2 IPETQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPL--PVKLPLVGGHEGAGVVVGMGENV   79 (347)
T ss_dssp             CCSEEEEEEESSTTCCCEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSSS--CCCSSEECCCEEEEEEEEECTTC
T ss_pred             CCcccEEEEEeCCCCCCEEEEeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCCC--CCCCCcccCccceEEEEEECCCC
Confidence            57789999998776 7999999999999999999999999999999999875431  24579999999999999999999


Q ss_pred             CCCCCCCEEEEcCCc-cCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHH
Q 020768           93 KTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVG  170 (321)
Q Consensus        93 ~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a  170 (321)
                      ++|++||+|++.+.. +|++|++|+.+++++|.+....+ ...+|+|+||++++++.++++|+++++++||.++ ++.||
T Consensus        80 ~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g-~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta  158 (347)
T 2hcy_A           80 KGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSG-YTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITV  158 (347)
T ss_dssp             CSCCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEBT-TTBCCSSBSEEEEETTTSEEECTTCCHHHHGGGGTHHHHH
T ss_pred             CCCcCCCEEEEecCCCCCCCChhhhCCCcccCccccccc-cCCCCcceeEEEeccccEEECCCCCCHHHHHHHhhhHHHH
Confidence            999999999987654 59999999999999999877655 3568999999999999999999999999988665 67889


Q ss_pred             HHHHHHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHH
Q 020768          171 LHACRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       171 ~~~l~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      |++++..++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++++|++.++++.+ ..++.+.+.++..
T Consensus       159 ~~~l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~~g~~~~~d~~~-~~~~~~~~~~~~~  236 (347)
T 2hcy_A          159 YKALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRSIGGEVFIDFTK-EKDIVGAVLKATD  236 (347)
T ss_dssp             HHHHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHHTTCCEEEETTT-CSCHHHHHHHHHT
T ss_pred             HHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHHcCCceEEecCc-cHhHHHHHHHHhC
Confidence            99998889999999999999 9999999999999999 7899999999999999999998887653 2466666665432


Q ss_pred             HhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-CccccchhhhccceEEEEeehhHHHh
Q 020768          250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARYLIYSFLFHFFLIV  315 (321)
Q Consensus       250 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~~~~~  315 (321)
                        + ++|++||++|....++.++++|+++|+++.+|...+ ..+++...++.|++++.|+..+....
T Consensus       237 --~-~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~  300 (347)
T 2hcy_A          237 --G-GAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGNRAD  300 (347)
T ss_dssp             --S-CEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTTCEEEEEHHHHHHTTCEEEECCCCCHHH
T ss_pred             --C-CCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCHHHHhhCCcEEEEccCCCHHH
Confidence              4 899999999987899999999999999999997653 35677777889999999987654443

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=2.6e-50  Score=369.91  Aligned_cols=288  Identities=23%  Similarity=0.320  Sum_probs=244.7

Q ss_pred             hhhceeEEEccCC-CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCC
Q 020768           15 EEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (321)
Q Consensus        15 ~~~~~a~~~~~~~-~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~   93 (321)
                      |.+||++++.+++ .++++|+|.|+|+++||||||.++++|++|++.+.|.+.. ....+|.++|||++|+|+++|++ +
T Consensus         1 m~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~~p~i~G~E~~G~V~~vG~~-~   78 (344)
T 2h6e_A            1 MVKSKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAK-QGFRLPIILGHENAGTIVEVGEL-A   78 (344)
T ss_dssp             CEEEEBCEECSCCC-----EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCC-TTCCSSEECCCCEEEEEEEECTT-C
T ss_pred             CceeEEEEEecCCCCCeEEEeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcc-cCCCCCccccccceEEEEEECCC-C
Confidence            3479999998774 6999999999999999999999999999999999875421 11357999999999999999999 9


Q ss_pred             CCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEec-CCcEEECCCCCChhhhccch-hhHHHH
Q 020768           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHP-ADLCFKLPDNVSLEEGAMCE-PLSVGL  171 (321)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~-~~~~~~ip~~~~~~~aa~~~-~~~~a~  171 (321)
                      +|++||+|+..+..+|++|.+|+.+.+++|.+...++. ..+|+|+||++++ +++++++ +++++++||.+. ++.|||
T Consensus        79 ~~~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~-~~~G~~aey~~v~~~~~~~~i-~~l~~~~aa~l~~~~~ta~  156 (344)
T 2h6e_A           79 KVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQ-TTNGGFSEYMLVKSSRWLVKL-NSLSPVEAAPLADAGTTSM  156 (344)
T ss_dssp             CCCTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBCBTT-TBCCSSBSEEEESCGGGEEEE-SSSCHHHHGGGGTHHHHHH
T ss_pred             CCCCCCEEEECCCCCCCCChhhhCCCcccCCCcccccc-ccCCcceeeEEecCcccEEEe-CCCCHHHhhhhhhhhHHHH
Confidence            99999999888888999999999999999998766553 5689999999999 9999999 999999988554 677899


Q ss_pred             HHHHHc-----CCCCCCEEEEEcCChhHHHHHHHHHHc--CCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHH
Q 020768          172 HACRRA-----NIGPETNVLIMGAGPIGLVTMLGARAF--GAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEV  244 (321)
Q Consensus       172 ~~l~~~-----~~~~g~~vlI~Gag~vG~~a~qla~~~--g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~  244 (321)
                      ++++..     ++ +|++|||+|+|++|++++|+|+++  |+ .|++++++++|.++++++|++.++++.+. .+   .+
T Consensus       157 ~al~~~~~~~~~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~-~~---~~  230 (344)
T 2h6e_A          157 GAIRQALPFISKF-AEPVVIVNGIGGLAVYTIQILKALMKNI-TIVGISRSKKHRDFALELGADYVSEMKDA-ES---LI  230 (344)
T ss_dssp             HHHHHHHHHHTTC-SSCEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHHHTCSEEECHHHH-HH---HH
T ss_pred             HHHHhhhhcccCC-CCCEEEEECCCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHHhCCCEEeccccc-hH---HH
Confidence            999776     89 999999999999999999999999  99 69999999999999999999998875320 12   23


Q ss_pred             HHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehhHHH
Q 020768          245 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFLI  314 (321)
Q Consensus       245 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~  314 (321)
                      .++.  .+.++|+|||++|++..++.++++|+++|+++.+|....+.+++...++.|++++.|+..+...
T Consensus       231 ~~~~--~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  298 (344)
T 2h6e_A          231 NKLT--DGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLN  298 (344)
T ss_dssp             HHHH--TTCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHHHTTCEEEECCSCCHH
T ss_pred             HHhh--cCCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCCCcccCHHHHhhCCcEEEEEecCCHH
Confidence            3332  2458999999999977999999999999999999987666678888889999999998765433

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=6.3e-51  Score=376.25  Aligned_cols=288  Identities=22%  Similarity=0.331  Sum_probs=247.9

Q ss_pred             chhhceeEEEccCC-CeEEEE--ecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCC
Q 020768           14 GEEVNMAAWLLGVN-TLKIQP--FELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGS   90 (321)
Q Consensus        14 ~~~~~~a~~~~~~~-~l~~~e--~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~   90 (321)
                      +|++||++++.+++ .+++++  +|.|+|+++||||||.+++||++|++.+.|.+..   ..+|.++|||++|+|+++|+
T Consensus         3 ~p~~mka~~~~~~~~~l~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~p~v~GhE~~G~V~~vG~   79 (360)
T 1piw_A            3 YPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGN---MKMPLVVGHEIVGKVVKLGP   79 (360)
T ss_dssp             TTTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSC---CCSSEECCCCEEEEEEEECT
T ss_pred             CChheEEEEEecCCCCeeEEeccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCCC---CCCCcccCcCceEEEEEeCC
Confidence            56689999998764 688999  9999999999999999999999999999875421   35799999999999999999


Q ss_pred             CCC-CCCCCCEEEEcC-CccCCCCccccCCCCCCCCCc-cccc-----cCCCCCcceeEEEecCCcEEECCCCCChhhhc
Q 020768           91 EVK-TLVPGDRVALEP-GISCWRCDHCKGGRYNLCPEM-KFFA-----TPPVHGSLANQVVHPADLCFKLPDNVSLEEGA  162 (321)
Q Consensus        91 ~v~-~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa  162 (321)
                      +|+ +|++||+|.+.+ ..+|++|.+|+.+++++|.+. ..++     +...+|+|+||++++++.++++|+++++++||
T Consensus        80 ~v~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa  159 (360)
T 1piw_A           80 KSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAA  159 (360)
T ss_dssp             TCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTSCHHHHG
T ss_pred             CCCCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEEchhheEECCCCCCHHHhh
Confidence            999 999999997654 458999999999999999876 2221     12457999999999999999999999999988


Q ss_pred             cch-hhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHH
Q 020768          163 MCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA  241 (321)
Q Consensus       163 ~~~-~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~  241 (321)
                      .++ ++.|||++++.+++++|++|||+|+|++|++++|+|+++|+ .|++++++++|+++++++|++.++++.+. .++.
T Consensus       160 ~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~-~~~~  237 (360)
T 1piw_A          160 PLLCGGLTVYSPLVRNGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGADHYIATLEE-GDWG  237 (360)
T ss_dssp             GGGTHHHHHHHHHHHTTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEEGGGT-SCHH
T ss_pred             hhhhhHHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCCEEEcCcCc-hHHH
Confidence            665 77889999988999999999999999999999999999999 69999999999999999999999886532 1333


Q ss_pred             HHHHHHHHHhCCCccEEEEcCCC--HHHHHHHHHHcccCCEEEEEcCCCCCc-cccchhhhccceEEEEeehhHHH
Q 020768          242 EEVEKIQKAMGTGIDVSFDCAGF--NKTMSTALSATRAGGKVCLVGMGHLEM-TVPLTPAAARYLIYSFLFHFFLI  314 (321)
Q Consensus       242 ~~~~~~~~~~~~~~d~vid~~g~--~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~k~~~i~g~~~~~~~  314 (321)
                      +.+       ..++|+|||++|.  +..++.++++|+++|+++.+|.... . +++...++.|++++.|++.+...
T Consensus       238 ~~~-------~~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~  305 (360)
T 1piw_A          238 EKY-------FDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ-HEMLSLKPYGLKAVSISYSALGSIK  305 (360)
T ss_dssp             HHS-------CSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS-SCCEEECGGGCBSCEEEECCCCCHH
T ss_pred             HHh-------hcCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCC-ccccCHHHHHhCCeEEEEEecCCHH
Confidence            221       2589999999998  6788899999999999999997765 5 67777889999999998765433

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=1.2e-49  Score=368.08  Aligned_cols=295  Identities=21%  Similarity=0.205  Sum_probs=248.5

Q ss_pred             CCcccccchhhceeEEEc--cCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEE
Q 020768            7 SQGEKEDGEEVNMAAWLL--GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV   84 (321)
Q Consensus         7 ~~~~~~~~~~~~~a~~~~--~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~   84 (321)
                      +...+..|+.+|||+++.  +++.++++|+|.|+|+++||||||.+++||++|++++.|.+..  ...+|.++|||++|+
T Consensus        17 ~~~~~~~m~~~mkA~~~~~~~~~~l~~~e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~P~v~GhE~~G~   94 (363)
T 3uog_A           17 NLYFQSMMSKWMQEWSTETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGL--DLAFPFVPASDMSGV   94 (363)
T ss_dssp             ------CCCSEEEEEEBSCTTTTCCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTTC--CCCSSBCCCCEEEEE
T ss_pred             eeEEeccCchhhEEEEEccCCCCCcEEEeeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC--CCCCCcCcccceEEE
Confidence            334555677889999998  4578999999999999999999999999999999999986532  256799999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCC---ccccccCCCCCcceeEEEecCCcEEECCCCCChhhh
Q 020768           85 IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE---MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEG  161 (321)
Q Consensus        85 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~a  161 (321)
                      |+++|++|++|++||+|++.+..      .|..+. ++|.+   .....+...+|+|+||++++++.++++|+++++++|
T Consensus        95 V~~vG~~v~~~~vGDrV~~~~~~------~c~~g~-~~c~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~a  167 (363)
T 3uog_A           95 VEAVGKSVTRFRPGDRVISTFAP------GWLDGL-RPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEA  167 (363)
T ss_dssp             EEEECTTCCSCCTTCEEEECSST------TCCSSS-CCSCSSCCCCCCTTTTSCCCCBSEEEEEGGGEEECCTTSCHHHH
T ss_pred             EEEECCCCCCCCCCCEEEEeccc------cccccc-cccccccccccccCcCCCCcceeEEEechHHeEECCCCCCHHHH
Confidence            99999999999999999987644      566677 77863   222122356899999999999999999999999999


Q ss_pred             ccch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCccc
Q 020768          162 AMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQD  239 (321)
Q Consensus       162 a~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~  239 (321)
                      |+++ ++.+||+++ +.+++++|++|||+|+|++|++++|+|+.+|+ +|++++++++|.++++++|++.+++  ....+
T Consensus       168 a~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~--~~~~~  244 (363)
T 3uog_A          168 STLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFALGADHGIN--RLEED  244 (363)
T ss_dssp             HTTTTHHHHHHHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTCSEEEE--TTTSC
T ss_pred             hhcccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHHHcCCCEEEc--CCccc
Confidence            9775 677999999 67999999999999999999999999999999 7999999999999999999999988  33357


Q ss_pred             HHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC-ccccchhhhccceEEEEeehhHHHhh
Q 020768          240 IAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE-MTVPLTPAAARYLIYSFLFHFFLIVL  316 (321)
Q Consensus       240 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~k~~~i~g~~~~~~~~~  316 (321)
                      +.+.++++.  .+.++|++|||+|. ..++.++++|+++|+++.+|...+. .+++...++.|++++.|+..+....+
T Consensus       245 ~~~~v~~~~--~g~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~  319 (363)
T 3uog_A          245 WVERVYALT--GDRGADHILEIAGG-AGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRRAL  319 (363)
T ss_dssp             HHHHHHHHH--TTCCEEEEEEETTS-SCHHHHHHHEEEEEEEEEECCCSSCEECCBTTHHHHTCCEEEECCCCCHHHH
T ss_pred             HHHHHHHHh--CCCCceEEEECCCh-HHHHHHHHHhhcCCEEEEEecCCCcccCcCHHHHHhCCcEEEEEecCCHHHH
Confidence            777777653  35689999999995 6889999999999999999977553 67888889999999999987654433

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=6e-50  Score=375.05  Aligned_cols=292  Identities=25%  Similarity=0.400  Sum_probs=253.0

Q ss_pred             chhhceeEEEccCCCeEEEEecCCC-CCCCcEEEEEeEeecccccHhhhhccccCC----cCCCCCcccccceeEEEEEe
Q 020768           14 GEEVNMAAWLLGVNTLKIQPFELPS-LGPYDVLVRMKAVGICGSDVHYLKTLRCAD----FVVKEPMVIGHECAGVIEKV   88 (321)
Q Consensus        14 ~~~~~~a~~~~~~~~l~~~e~~~p~-~~~~evlVkv~a~~l~~~D~~~~~g~~~~~----~~~~~p~~~G~e~vG~V~~v   88 (321)
                      .+.+|+++++..++.++++++|.|+ |+++||||||.+++||++|++++.|...+.    ....+|.++|||++|+|+++
T Consensus        27 ~~~~m~a~~~~~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~P~i~G~E~~G~V~~v  106 (404)
T 3ip1_A           27 GKLTWLGSKVWRYPEVRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEA  106 (404)
T ss_dssp             TTBBSCGGGTEEEEEEEEEEECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSBBSCCSCBCSSEECCCEEEEEEEEE
T ss_pred             hhhhcceEEEEeCCceEEEEcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCccccccccCCCCcccCccceEEEEEE
Confidence            3445777766666689999999999 999999999999999999999988643221    11467999999999999999


Q ss_pred             CCCC------CCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCCh----
Q 020768           89 GSEV------KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSL----  158 (321)
Q Consensus        89 G~~v------~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~----  158 (321)
                      |++|      ++|++||+|++.+..+|+.|.+|+.+++++|.+...++. ..+|+|+||++++++.++++|+++++    
T Consensus       107 G~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~~~~~  185 (404)
T 3ip1_A          107 GPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGF-NVDGAFAEYVKVDAKYAWSLRELEGVYEGD  185 (404)
T ss_dssp             CTTCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGEEECGGGBTTBCTH
T ss_pred             CCCccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCccccccCC-CCCCCCcceEEechHHeEeccccccccccc
Confidence            9999      889999999999999999999999999999999877664 57899999999999999999998753    


Q ss_pred             --hhh-ccchhhHHHHHHHH-H-cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEec
Q 020768          159 --EEG-AMCEPLSVGLHACR-R-ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV  233 (321)
Q Consensus       159 --~~a-a~~~~~~~a~~~l~-~-~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~  233 (321)
                        .++ ++..++++||+++. . +++++|++|||+|+|++|++++|+|+++|+++|++++++++|+++++++|++.++++
T Consensus       186 ~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~  265 (404)
T 3ip1_A          186 RLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDP  265 (404)
T ss_dssp             HHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECT
T ss_pred             cchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcC
Confidence              334 45568999999984 3 589999999999999999999999999999889999999999999999999999986


Q ss_pred             CCCcccHHHHHHHHHHHhCCCccEEEEcCCCH-HHHHHHHHHc----ccCCEEEEEcCCCCCccccchhhhccceEEEEe
Q 020768          234 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGFN-KTMSTALSAT----RAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFL  308 (321)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l----~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~  308 (321)
                      .+  .++.+.++++.  .+.++|+||||+|++ ..+..++++|    +++|+++.+|......+++...++.|++++.|+
T Consensus       266 ~~--~~~~~~i~~~t--~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~  341 (404)
T 3ip1_A          266 TK--ENFVEAVLDYT--NGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTGEVFQVRRAQIVGS  341 (404)
T ss_dssp             TT--SCHHHHHHHHT--TTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSCCCSCEEECHHHHHHTTCEEEEC
T ss_pred             CC--CCHHHHHHHHh--CCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCCCCCCCcccHHHHhccceEEEEe
Confidence            54  56777776653  366899999999996 3677777888    999999999988777789999999999999998


Q ss_pred             eh
Q 020768          309 FH  310 (321)
Q Consensus       309 ~~  310 (321)
                      +.
T Consensus       342 ~~  343 (404)
T 3ip1_A          342 QG  343 (404)
T ss_dssp             CC
T ss_pred             cC
Confidence            84

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=1.6e-49  Score=364.61  Aligned_cols=285  Identities=29%  Similarity=0.469  Sum_probs=250.4

Q ss_pred             ceeEEEccCCC---eEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768           18 NMAAWLLGVNT---LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (321)
Q Consensus        18 ~~a~~~~~~~~---l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~   94 (321)
                      ||++++.+++.   ++++++|.|+|+++||||||.++++|++|++++.|.++.  ...+|.++|||++|+|+++|++|++
T Consensus         1 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~v~G~E~~G~V~~vG~~v~~   78 (343)
T 2eih_A            1 MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASP--KLPLPHVLGADGSGVVDAVGPGVEG   78 (343)
T ss_dssp             CEEEEECSSSSGGGEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSST--TCCSSEECCSEEEEEEEEECSSCCS
T ss_pred             CeEEEEecCCCCceEEEEecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCCC--CCCCCcccccceEEEEEEECCCCCC
Confidence            78999986653   999999999999999999999999999999999875431  1357999999999999999999999


Q ss_pred             CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhc-cchhhHHHHHH
Q 020768           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA-MCEPLSVGLHA  173 (321)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa-~~~~~~~a~~~  173 (321)
                      |++||+|++.+..+|+.|++|+.+++++|.+....|. ..+|+|+||++++++.++++|+++++++|| +..++.|||++
T Consensus        79 ~~vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~G~-~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~a  157 (343)
T 2eih_A           79 FAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGE-HRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQM  157 (343)
T ss_dssp             CCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTT-SSCCSSBSEEEEEGGGEEECCTTSCHHHHHHSHHHHHHHHHH
T ss_pred             CCCCCEEEECCCCCcccchhhccCcccccccccccCc-CCCccceeEEEeChHHeEECCCCCCHHHHhhchhhHHHHHHH
Confidence            9999999999988999999999999999998876653 457999999999999999999999999998 55689999999


Q ss_pred             HHH-cCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768          174 CRR-ANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       174 l~~-~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      ++. +++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.++++++|++.++++.+  .++.+.+.++.  .
T Consensus       158 l~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~ga~~~~d~~~--~~~~~~~~~~~--~  232 (343)
T 2eih_A          158 VVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGADETVNYTH--PDWPKEVRRLT--G  232 (343)
T ss_dssp             HTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTS--TTHHHHHHHHT--T
T ss_pred             HHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEcCCc--ccHHHHHHHHh--C
Confidence            976 69999999999999 9999999999999999 7999999999999999999998887654  35555555542  2


Q ss_pred             CCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC-ccccchhhhccceEEEEeehh
Q 020768          252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE-MTVPLTPAAARYLIYSFLFHF  311 (321)
Q Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~k~~~i~g~~~~  311 (321)
                      +.++|++||++| ...++.++++|+++|+++.+|..... .+++...++.|++++.|+..+
T Consensus       233 ~~~~d~vi~~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~  292 (343)
T 2eih_A          233 GKGADKVVDHTG-ALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMA  292 (343)
T ss_dssp             TTCEEEEEESSC-SSSHHHHHHHEEEEEEEEESSCCCSCCCCCCTTHHHHTTCEEEECCSC
T ss_pred             CCCceEEEECCC-HHHHHHHHHhhccCCEEEEEecCCCCcCccCHHHHHhCCcEEEEecCc
Confidence            458999999999 57889999999999999999976554 357888888999999998754

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=4.2e-50  Score=375.44  Aligned_cols=286  Identities=25%  Similarity=0.447  Sum_probs=246.3

Q ss_pred             hceeEEEccCCCeEEEEecCCCC-CC-----CcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCC
Q 020768           17 VNMAAWLLGVNTLKIQPFELPSL-GP-----YDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGS   90 (321)
Q Consensus        17 ~~~a~~~~~~~~l~~~e~~~p~~-~~-----~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~   90 (321)
                      +|||+++.+++.++++|+|.|+| ++     +||||||.+++||++|++++.|...    ..+|.++|||++|+|+++|+
T Consensus         2 ~MkA~~~~~~~~l~~~~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~~----~~~p~v~GhE~~G~V~~vG~   77 (398)
T 2dph_A            2 GNKSVVYHGTRDLRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFI----VPKGHVLGHEITGEVVEKGS   77 (398)
T ss_dssp             CEEEEEEEETTEEEEEEECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSSC----CCTTCBCCCCEEEEEEEECT
T ss_pred             ccEEEEEEcCCCEEEEEccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCCC----CCCCcccCCceEEEEEEECC
Confidence            59999999888999999999998 68     9999999999999999999987531    46799999999999999999


Q ss_pred             CCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCC--cc------cccc--CCCCCcceeEEEecCC--cEEECCCCCCh
Q 020768           91 EVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE--MK------FFAT--PPVHGSLANQVVHPAD--LCFKLPDNVSL  158 (321)
Q Consensus        91 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~--~~------~~~~--~~~~G~~~~~~~v~~~--~~~~ip~~~~~  158 (321)
                      +|++|++||+|++.+..+|+.|++|+.+++++|.+  ..      .++.  ...+|+|+||++++++  .++++|+++++
T Consensus        78 ~v~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~  157 (398)
T 2dph_A           78 DVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDKEQA  157 (398)
T ss_dssp             TCCSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBSSCCCSSBSEEEESSHHHHCEECSSHHHH
T ss_pred             CCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccccCCCCceeeeeEEeccccCeEEECCCCCCh
Confidence            99999999999999999999999999999999987  21      2221  1357999999999987  89999999999


Q ss_pred             hh----hccc-hhhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEec
Q 020768          159 EE----GAMC-EPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV  233 (321)
Q Consensus       159 ~~----aa~~-~~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~  233 (321)
                      ++    ||.+ .+++|||++++.+++++|++|||+|+|++|++++|+|+++|+++|++++++++|+++++++|++ ++++
T Consensus       158 ~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~i~~  236 (398)
T 2dph_A          158 MEKIKDLTLISDILPTGFHGCVSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFE-TIDL  236 (398)
T ss_dssp             HHTHHHHTTTTTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCE-EEET
T ss_pred             hhhcchhhhhcCHHHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCc-EEcC
Confidence            87    6655 4889999999889999999999999999999999999999997899999999999999999995 7776


Q ss_pred             CCCcccH-HHHHHHHHHHhCCCccEEEEcCCCHH--------------HHHHHHHHcccCCEEEEEcCCC----------
Q 020768          234 STNLQDI-AEEVEKIQKAMGTGIDVSFDCAGFNK--------------TMSTALSATRAGGKVCLVGMGH----------  288 (321)
Q Consensus       234 ~~~~~~~-~~~~~~~~~~~~~~~d~vid~~g~~~--------------~~~~~~~~l~~~G~~v~~g~~~----------  288 (321)
                      .+  .++ .+.++++.  .+.++|+|||++|+..              .++.++++|+++|+++++|...          
T Consensus       237 ~~--~~~~~~~~~~~~--~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~~~~~~~~~~~~  312 (398)
T 2dph_A          237 RN--SAPLRDQIDQIL--GKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIYVGSDPDPVNKD  312 (398)
T ss_dssp             TS--SSCHHHHHHHHH--SSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCCCSCCSSCSSHH
T ss_pred             CC--cchHHHHHHHHh--CCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEecccccccccccccc
Confidence            53  344 66666543  3458999999999752              7899999999999999999662          


Q ss_pred             ---CCccccchhhhccceEEEEeehh
Q 020768          289 ---LEMTVPLTPAAARYLIYSFLFHF  311 (321)
Q Consensus       289 ---~~~~~~~~~~~~k~~~i~g~~~~  311 (321)
                         ...++++..++.|++++.|+...
T Consensus       313 ~~~~~~~~~~~~~~~k~~~i~g~~~~  338 (398)
T 2dph_A          313 AGSGRLHLDFGKMWTKSIRIMTGMAP  338 (398)
T ss_dssp             HHTTEEEEEHHHHHHTTCEEECSSCC
T ss_pred             ccCCcccccHHHHhhcCCEEEEeccC
Confidence               23456777789999999997654

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.5e-49  Score=371.74  Aligned_cols=287  Identities=26%  Similarity=0.464  Sum_probs=244.9

Q ss_pred             hhceeEEEccCCCeEEEEecCCCCC-CCc------EEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEe
Q 020768           16 EVNMAAWLLGVNTLKIQPFELPSLG-PYD------VLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV   88 (321)
Q Consensus        16 ~~~~a~~~~~~~~l~~~e~~~p~~~-~~e------vlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~v   88 (321)
                      ++||++++.+++.++++++|.|+|+ ++|      |||||.+++||++|++++.|...    ..+|.++|||++|+|+++
T Consensus         1 ~~Mka~~~~~~~~l~~~~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~~----~~~p~v~GhE~~G~V~~v   76 (398)
T 1kol_A            1 SGNRGVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT----AQVGLVLGHEITGEVIEK   76 (398)
T ss_dssp             -CEEEEEEEETTEEEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC----CCTTCBCCCCEEEEEEEE
T ss_pred             CccEEEEEecCCceEEEEecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCCC----CCCCcccCcccEEEEEEE
Confidence            3699999998889999999999997 898      99999999999999999987532    456899999999999999


Q ss_pred             CCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCcc------cccc---CCCCCcceeEEEecCC--cEEECCCCCC
Q 020768           89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK------FFAT---PPVHGSLANQVVHPAD--LCFKLPDNVS  157 (321)
Q Consensus        89 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~---~~~~G~~~~~~~v~~~--~~~~ip~~~~  157 (321)
                      |++|++|++||+|++.+..+|++|++|+.+++++|.+..      .++.   ...+|+|+||+++++.  +++++|++++
T Consensus        77 G~~v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~~~~~P~~~~  156 (398)
T 1kol_A           77 GRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDK  156 (398)
T ss_dssp             CTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHHH
T ss_pred             CCCCCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccCCCCCceeeeEEEecchhCeEEECCCCcc
Confidence            999999999999999888899999999999999998764      1222   1357999999999987  8999999998


Q ss_pred             hhh----hccc-hhhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEe
Q 020768          158 LEE----GAMC-EPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVK  232 (321)
Q Consensus       158 ~~~----aa~~-~~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~  232 (321)
                      +.+    +|.+ .++.|||++++.+++++|++|||+|+|++|++++|+||++|+++|++++++++|+++++++|++ +++
T Consensus       157 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~i~  235 (398)
T 1kol_A          157 AMEKIRDLTCLSDILPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFE-IAD  235 (398)
T ss_dssp             HHHTHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCE-EEE
T ss_pred             hhhhcccccccccHHHHHHHHHHHcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCc-EEc
Confidence            887    4544 4789999999889999999999999999999999999999997899999999999999999997 777


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEcCCCH---------------HHHHHHHHHcccCCEEEEEcCC-CC-------
Q 020768          233 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFN---------------KTMSTALSATRAGGKVCLVGMG-HL-------  289 (321)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~---------------~~~~~~~~~l~~~G~~v~~g~~-~~-------  289 (321)
                      +.+. .++.+.++++.  .+.++|+|||++|++               ..++.++++|+++|+++.+|.. .+       
T Consensus       236 ~~~~-~~~~~~v~~~t--~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~  312 (398)
T 1kol_A          236 LSLD-TPLHEQIAALL--GEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDA  312 (398)
T ss_dssp             TTSS-SCHHHHHHHHH--SSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSH
T ss_pred             cCCc-chHHHHHHHHh--CCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEeccccCCccccccc
Confidence            6532 23666666543  356899999999975               3789999999999999999965 11       


Q ss_pred             -----CccccchhhhccceEEEEeeh
Q 020768          290 -----EMTVPLTPAAARYLIYSFLFH  310 (321)
Q Consensus       290 -----~~~~~~~~~~~k~~~i~g~~~  310 (321)
                           ...++...++.|++++.|+..
T Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~g~~~  338 (398)
T 1kol_A          313 AAKIGSLSIRFGLGWAKSHSFHTGQT  338 (398)
T ss_dssp             HHHTTCCCCCHHHHHHTTCEEEESSC
T ss_pred             ccccccccccHHHHhhcccEEEeccc
Confidence                 134566668889999998753

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=8.8e-50  Score=369.54  Aligned_cols=287  Identities=22%  Similarity=0.292  Sum_probs=241.9

Q ss_pred             hhhceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCC
Q 020768           15 EEVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (321)
Q Consensus        15 ~~~~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~   93 (321)
                      .++||+.+..++ +.++++++|.|+|+++||||||.+++||++|++++.|....   ..+|.++|||++|+|+++|++|+
T Consensus        20 ~~~~~a~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~P~v~GhE~~G~V~~vG~~V~   96 (369)
T 1uuf_A           20 GLKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAG---TVYPCVPGHEIVGRVVAVGDQVE   96 (369)
T ss_dssp             ---CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSC---CCSSBCCCCCEEEEEEEECTTCC
T ss_pred             CceEEEEEEcCCCCCcEEEEecCCCCCCCeEEEEEEEEeecHHHHHHhcCCCCC---CCCCeecccCceEEEEEECCCCC
Confidence            345899888755 68999999999999999999999999999999999875421   35799999999999999999999


Q ss_pred             CCCCCCEEEEcCCc-cCCCCccccCCCCCCCCCcc--ccc-----cCCCCCcceeEEEecCCcEEECCCC-CChhhhccc
Q 020768           94 TLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMK--FFA-----TPPVHGSLANQVVHPADLCFKLPDN-VSLEEGAMC  164 (321)
Q Consensus        94 ~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~-----~~~~~G~~~~~~~v~~~~~~~ip~~-~~~~~aa~~  164 (321)
                      +|++||+|++.+.. +|++|.+|+.+.+++|++..  +.+     +...+|+|+||+++|++.++++|++ +++++||.+
T Consensus        97 ~~~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~~~~~~~P~~~ls~~~aa~l  176 (369)
T 1uuf_A           97 KYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPL  176 (369)
T ss_dssp             SCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCSCGGGHHHHGGG
T ss_pred             CCCCCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcchhEEECCCCCCCHHHhhhh
Confidence            99999999998764 69999999999999999763  210     1235799999999999999999999 999998866


Q ss_pred             h-hhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHH
Q 020768          165 E-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEE  243 (321)
Q Consensus       165 ~-~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~  243 (321)
                      + ++.|||++++.+++++|++|||+|+|++|++++|+|+.+|+ .|++++.++++.++++++|++.++++.+  .++   
T Consensus       177 ~~~~~tA~~al~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~lGa~~vi~~~~--~~~---  250 (369)
T 1uuf_A          177 LCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEVVNSRN--ADE---  250 (369)
T ss_dssp             GTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEETTC--HHH---
T ss_pred             hhhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEecccc--HHH---
Confidence            4 77899999988899999999999999999999999999999 5999999999999999999999988643  222   


Q ss_pred             HHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCc-cccchhhhccceEEEEeehhHHH
Q 020768          244 VEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEM-TVPLTPAAARYLIYSFLFHFFLI  314 (321)
Q Consensus       244 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~k~~~i~g~~~~~~~  314 (321)
                      +.++    ..++|++||++|.+..++.++++|+++|+++.+|...... +++...++.|++++.|++.+...
T Consensus       251 ~~~~----~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  318 (369)
T 1uuf_A          251 MAAH----LKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIP  318 (369)
T ss_dssp             HHTT----TTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCCHH
T ss_pred             HHHh----hcCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCCCccccCHHHHHhCCcEEEEeecCCHH
Confidence            2222    2589999999998767899999999999999999776544 67777889999999998765443

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=2.6e-49  Score=365.04  Aligned_cols=287  Identities=23%  Similarity=0.323  Sum_probs=244.4

Q ss_pred             chhhceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCC
Q 020768           14 GEEVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (321)
Q Consensus        14 ~~~~~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v   92 (321)
                      ++++|+++...++ +.++++++|.|+|+++||||||.++++|++|++.+.|.+..   ..+|.++|||++|+|+++|++|
T Consensus         6 ~~m~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~P~v~GhE~~G~V~~vG~~v   82 (357)
T 2cf5_A            6 AERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGM---SNYPMVPGHEVVGEVVEVGSDV   82 (357)
T ss_dssp             CCCEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTTC---CCSSBCCCCEEEEEEEEECSSC
T ss_pred             CcceeEEEEEccCCCCcEEEEecCCCCCCCEEEEEEEEEeecchhhhhhcCCCCC---CCCCeecCcceeEEEEEECCCC
Confidence            3557888888764 78999999999999999999999999999999998875421   4579999999999999999999


Q ss_pred             CCCCCCCEEEEcCC-ccCCCCccccCCCCCCCCCccccc------cCCCCCcceeEEEecCCcEEECCCCCChhhhccch
Q 020768           93 KTLVPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE  165 (321)
Q Consensus        93 ~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~  165 (321)
                      ++|++||+|++.+. .+|++|.+|+.+++++|.+..+..      +...+|+|+||+++|++.++++|+++++++||.++
T Consensus        83 ~~~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~  162 (357)
T 2cf5_A           83 SKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLL  162 (357)
T ss_dssp             CSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGGEEECCSSCCHHHHTGGG
T ss_pred             CCCCCCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhhEEECcCCCCHHHhhhhh
Confidence            99999999998654 489999999999999997553321      12357999999999999999999999999988665


Q ss_pred             -hhHHHHHHHHHcCCC-CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-HcCCCeEEecCCCcccHHH
Q 020768          166 -PLSVGLHACRRANIG-PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADNIVKVSTNLQDIAE  242 (321)
Q Consensus       166 -~~~~a~~~l~~~~~~-~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~g~~~vi~~~~~~~~~~~  242 (321)
                       ++.+||++++..+++ +|++|||+|+|++|++++|+|+++|+ +|++++++++|.++++ ++|++.++++.+  .   +
T Consensus       163 ~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~--~---~  236 (357)
T 2cf5_A          163 CAGVTVYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQDLGADDYVIGSD--Q---A  236 (357)
T ss_dssp             THHHHHHHHHHHTSTTSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHTTSCCSCEEETTC--H---H
T ss_pred             hhHHHHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHcCCceeecccc--H---H
Confidence             678899999888888 99999999999999999999999999 7999999999999888 999999988653  1   2


Q ss_pred             HHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCcc-ccchhhhccceEEEEeehhHHH
Q 020768          243 EVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMT-VPLTPAAARYLIYSFLFHFFLI  314 (321)
Q Consensus       243 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~k~~~i~g~~~~~~~  314 (321)
                      .+.++    ..++|+|||++|.+..++.++++++++|+++.+|....+.. ++.. ++.|++++.|++.+...
T Consensus       237 ~~~~~----~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~  304 (357)
T 2cf5_A          237 KMSEL----ADSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPL-LMLGRKVITGSFIGSMK  304 (357)
T ss_dssp             HHHHS----TTTEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSSCCCCCHHH-HHHHTCEEEECCSCCHH
T ss_pred             HHHHh----cCCCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCCCccccCHH-HHhCccEEEEEccCCHH
Confidence            23332    24799999999986678999999999999999997655444 6666 88999999999875443

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=7.6e-49  Score=360.59  Aligned_cols=290  Identities=29%  Similarity=0.394  Sum_probs=251.6

Q ss_pred             ceeEEEccCC-CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccC-----CcCCCCCcccccceeEEEEEeCCC
Q 020768           18 NMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCA-----DFVVKEPMVIGHECAGVIEKVGSE   91 (321)
Q Consensus        18 ~~a~~~~~~~-~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~-----~~~~~~p~~~G~e~vG~V~~vG~~   91 (321)
                      ||++++.+++ .++++|+|.|+|+++||||||.++++|++|++++.|.+..     .....+|.++|||++|+|+++|++
T Consensus         1 Mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   80 (347)
T 1jvb_A            1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE   80 (347)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred             CeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEECCC
Confidence            7999998774 7999999999999999999999999999999998875431     012357999999999999999999


Q ss_pred             CCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecC-CcEEECCCCCChhhhccch-hhHH
Q 020768           92 VKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA-DLCFKLPDNVSLEEGAMCE-PLSV  169 (321)
Q Consensus        92 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~-~~~~~ip~~~~~~~aa~~~-~~~~  169 (321)
                      |++|++||+|+..+..+|++|++|+.+++++|++...++. ..+|+|+||+++|+ +.++++ +++++++||.+. ++.|
T Consensus        81 v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~-~~~G~~aey~~v~~~~~~~~i-~~~~~~~aa~l~~~~~t  158 (347)
T 1jvb_A           81 VVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVIVPHYKYMYKL-RRLNAVEAAPLTCSGIT  158 (347)
T ss_dssp             CCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTT-TBCCSSBSEEEESCGGGEEEC-SSSCHHHHGGGGTHHHH
T ss_pred             CCCCCCCCEEEeCCCCCCCCChhhhCcCcccCcccccccc-cCCCcceeEEEecCccceEEe-CCCCHHHcccchhhHHH
Confidence            9999999999888888999999999999999998876653 56799999999999 999999 999999988654 6778


Q ss_pred             HHHHHHHcCCCCCCEEEEEcC-ChhHHHHHHHHHHc-CCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHH
Q 020768          170 GLHACRRANIGPETNVLIMGA-GPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKI  247 (321)
Q Consensus       170 a~~~l~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~-g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~  247 (321)
                      ||++++++++++|++|||+|+ |++|++++|+++.. |+ +|+++++++++.++++++|++.++++.+  .++.+.+.++
T Consensus       159 a~~~l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~  235 (347)
T 1jvb_A          159 TYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRAGADYVINASM--QDPLAEIRRI  235 (347)
T ss_dssp             HHHHHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHHTCSEEEETTT--SCHHHHHHHH
T ss_pred             HHHHHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHHhCCCEEecCCC--ccHHHHHHHH
Confidence            999998899999999999999 59999999999999 99 6999999999999999999999888654  4555555544


Q ss_pred             HHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCC-CCccccchhhhccceEEEEeehhHHHh
Q 020768          248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-LEMTVPLTPAAARYLIYSFLFHFFLIV  315 (321)
Q Consensus       248 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~k~~~i~g~~~~~~~~  315 (321)
                      .  ..+++|++||++|++..++.++++|+++|+++.+|... .+ +++...++.|++++.|+..+....
T Consensus       236 ~--~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~  301 (347)
T 1jvb_A          236 T--ESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADL-HYHAPLITLSEIQFVGSLVGNQSD  301 (347)
T ss_dssp             T--TTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCC-CCCHHHHHHHTCEEEECCSCCHHH
T ss_pred             h--cCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCC-CCCHHHHHhCceEEEEEeccCHHH
Confidence            2  11489999999999778999999999999999999765 45 778778899999999987654433

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=2.8e-48  Score=359.21  Aligned_cols=285  Identities=24%  Similarity=0.317  Sum_probs=241.0

Q ss_pred             hhceeEEEcc-CCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768           16 EVNMAAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (321)
Q Consensus        16 ~~~~a~~~~~-~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~   94 (321)
                      ++|++....+ ++.++++++|.|+|+++||||||.+++||++|++.+.|.+..   ..+|.++|||++|+|+++|++|++
T Consensus        15 mk~~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~P~v~GhE~~G~V~~vG~~V~~   91 (366)
T 1yqd_A           15 VKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGF---SMYPLVPGHEIVGEVTEVGSKVKK   91 (366)
T ss_dssp             EEEEEEEECSTTCCEEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSSC---CCSSBCCCCCEEEEEEEECTTCCS
T ss_pred             eeEEEEEEcCCCCCcEEEEccCCCCCCCeEEEEEEEEeechhhHHHHcCCCCC---CCCCEecccceEEEEEEECCCCCc
Confidence            3444444443 468999999999999999999999999999999999875421   457999999999999999999999


Q ss_pred             CCCCCEEEEcCC-ccCCCCccccCCCCCCCCCccccc------cCCCCCcceeEEEecCCcEEECCCCCChhhhccch-h
Q 020768           95 LVPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-P  166 (321)
Q Consensus        95 ~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~  166 (321)
                      |++||+|++.+. .+|+.|.+|+.+++++|.+..+..      +...+|+|+||++++++.++++|+++++++||.++ +
T Consensus        92 ~~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~  171 (366)
T 1yqd_A           92 VNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCA  171 (366)
T ss_dssp             CCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGGCEECCTTSCTTTTGGGGTH
T ss_pred             CCCCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhhEEECCCCCCHHHhhhhhhh
Confidence            999999998654 489999999999999996553211      12357999999999999999999999999988665 7


Q ss_pred             hHHHHHHHHHcCCC-CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-HcCCCeEEecCCCcccHHHHH
Q 020768          167 LSVGLHACRRANIG-PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADNIVKVSTNLQDIAEEV  244 (321)
Q Consensus       167 ~~~a~~~l~~~~~~-~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~g~~~vi~~~~~~~~~~~~~  244 (321)
                      +.+||++++..+++ +|++|||+|+|++|++++|+|+.+|+ +|+++++++++.+.++ ++|++.++++.+  .   +.+
T Consensus       172 ~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~--~---~~~  245 (366)
T 1yqd_A          172 GITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGS-KVTVISTSPSKKEEALKNFGADSFLVSRD--Q---EQM  245 (366)
T ss_dssp             HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGHHHHHHTSCCSEEEETTC--H---HHH
T ss_pred             HHHHHHHHHhcCcCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCceEEeccC--H---HHH
Confidence            78899999888888 99999999999999999999999999 7999999999998877 899999888653  1   233


Q ss_pred             HHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehhHH
Q 020768          245 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFL  313 (321)
Q Consensus       245 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~  313 (321)
                      .++    ..++|+|||++|.+..++.++++++++|+++.+|......+++...++.|++++.|++.+..
T Consensus       246 ~~~----~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~  310 (366)
T 1yqd_A          246 QAA----AGTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRKIVAGSGIGGM  310 (366)
T ss_dssp             HHT----TTCEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSSCEEECHHHHHTTTCEEEECCSCCH
T ss_pred             HHh----hCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCCCCCcCHHHHHhCCcEEEEecCCCH
Confidence            332    24799999999986678999999999999999998766667787788999999999876443

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=1.2e-47  Score=364.08  Aligned_cols=298  Identities=21%  Similarity=0.221  Sum_probs=248.7

Q ss_pred             cccchhhceeEEEccCC--------------CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhh-------------c
Q 020768           11 KEDGEEVNMAAWLLGVN--------------TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK-------------T   63 (321)
Q Consensus        11 ~~~~~~~~~a~~~~~~~--------------~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~-------------g   63 (321)
                      ..++|+|||++++.+++              .++++|+|.|+|+++||||||.+++||++|++...             +
T Consensus        18 ~~~~p~tmkA~v~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~   97 (447)
T 4a0s_A           18 AAPVPDTYLALHLRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNA   97 (447)
T ss_dssp             HSCCCSEEEEEEEEGGGTTTTTTCSSCCHHHHCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHH
T ss_pred             ccCCChhheeeeeeccccccccccccCCCCCCceEEeccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhc
Confidence            45788999999999776              79999999999999999999999999999985432             1


Q ss_pred             cccC-CcCCCCC-cccccceeEEEEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeE
Q 020768           64 LRCA-DFVVKEP-MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQ  141 (321)
Q Consensus        64 ~~~~-~~~~~~p-~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~  141 (321)
                      .... .....+| .++|||++|+|+++|++|++|++||+|++.+...|+.|+.|. +..++|.+...+|....+|+|+||
T Consensus        98 ~~g~~~~~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~~~~-~~~~~c~~~~~~G~~~~~G~~aey  176 (447)
T 4a0s_A           98 RQGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATH-GDGMLGTEQRAWGFETNFGGLAEY  176 (447)
T ss_dssp             TTCGGGGGGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSGGGG-TCTTCSTTCEETTTTSSSCSSBSE
T ss_pred             ccCccccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCcccccc-cccccccccccccccCCCCceeee
Confidence            1000 0112456 699999999999999999999999999999888888887554 678999998888765557999999


Q ss_pred             EEecCCcEEECCCCCChhhhccch-hhHHHHHHHH---HcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCCh
Q 020768          142 VVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR---RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD  216 (321)
Q Consensus       142 ~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l~---~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~  216 (321)
                      +++++++++++|+++++++||+++ ++.+||+++.   .+++++|++|||+|+ |++|++++|+|++.|+ .++++++++
T Consensus       177 ~~v~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga-~vi~~~~~~  255 (447)
T 4a0s_A          177 GVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGG-IPVAVVSSA  255 (447)
T ss_dssp             EEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSH
T ss_pred             eecCHHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCH
Confidence            999999999999999999999765 7789999983   488999999999998 9999999999999999 678888999


Q ss_pred             hHHHHHHHcCCCeEEecCCCcc----------------cHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCE
Q 020768          217 YRLSVAKELGADNIVKVSTNLQ----------------DIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGK  280 (321)
Q Consensus       217 ~~~~~~~~~g~~~vi~~~~~~~----------------~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~  280 (321)
                      +|.++++++|++.++++.+.+.                .+.+.+.+   ..+.++|++||++|. ..++.++++++++|+
T Consensus       256 ~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~---~~g~g~Dvvid~~G~-~~~~~~~~~l~~~G~  331 (447)
T 4a0s_A          256 QKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVE---KAGREPDIVFEHTGR-VTFGLSVIVARRGGT  331 (447)
T ss_dssp             HHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHH---HHSSCCSEEEECSCH-HHHHHHHHHSCTTCE
T ss_pred             HHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHHHH---HhCCCceEEEECCCc-hHHHHHHHHHhcCCE
Confidence            9999999999999887543210                11233333   336789999999997 688999999999999


Q ss_pred             EEEEcCCCC-CccccchhhhccceEEEEeehhHHH
Q 020768          281 VCLVGMGHL-EMTVPLTPAAARYLIYSFLFHFFLI  314 (321)
Q Consensus       281 ~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~~~~  314 (321)
                      ++.+|...+ ...++...++.|++++.|++.+...
T Consensus       332 iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  366 (447)
T 4a0s_A          332 VVTCGSSSGYLHTFDNRYLWMKLKKIVGSHGANHE  366 (447)
T ss_dssp             EEESCCTTCSEEEEEHHHHHHTTCEEEECCSCCHH
T ss_pred             EEEEecCCCcccccCHHHHHhCCCEEEecCCCCHH
Confidence            999997654 4577888899999999999876543

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=2.3e-47  Score=362.75  Aligned_cols=299  Identities=22%  Similarity=0.196  Sum_probs=252.2

Q ss_pred             cccchhhceeEEEccC----------------CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhcccc--------
Q 020768           11 KEDGEEVNMAAWLLGV----------------NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRC--------   66 (321)
Q Consensus        11 ~~~~~~~~~a~~~~~~----------------~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~--------   66 (321)
                      ..++|++|||+++.++                +.++++++|.|+|+++||||||.+++||++|++...+...        
T Consensus        24 ~~~iP~tmkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~  103 (456)
T 3krt_A           24 ALPLPESYRAITVHKDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLER  103 (456)
T ss_dssp             HSCCCSCEEEEEEEGGGTTTTTTCCGGGCCHHHHCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHH
T ss_pred             cCCCCcceEEEEEeccccccccccccccCCCCCCcEEEEccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhh
Confidence            3468889999999865                5799999999999999999999999999999876432100        


Q ss_pred             ----CC--cCCCCC-cccccceeEEEEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcce
Q 020768           67 ----AD--FVVKEP-MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLA  139 (321)
Q Consensus        67 ----~~--~~~~~p-~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~  139 (321)
                          +.  ....+| .++|||++|+|+++|++|++|++||+|++.+. .|..|..|..+..++|.+...++....+|+|+
T Consensus       104 ~g~~~~~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~-~c~~~~~~~~~~~~~c~~~~~~G~~~~~G~~a  182 (456)
T 3krt_A          104 YGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCL-SVELESSDGHNDTMLDPEQRIWGFETNFGGLA  182 (456)
T ss_dssp             HHTSCHHHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCE-ECCCCSGGGTTSGGGCTTCEETTTTSSSCSSB
T ss_pred             ccccccccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCC-cccccccccccccccCccccccccCCCCCccc
Confidence                00  013457 69999999999999999999999999999643 68889999999999999998888766679999


Q ss_pred             eEEEecCCcEEECCCCCChhhhccch-hhHHHHHHHHH---cCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeC
Q 020768          140 NQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACRR---ANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV  214 (321)
Q Consensus       140 ~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l~~---~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~  214 (321)
                      ||+++++++++++|+++++++||+++ ++.|||+++..   +++++|++|||+|+ |++|++++|+|+++|+ .++++++
T Consensus       183 ey~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga-~vi~~~~  261 (456)
T 3krt_A          183 EIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGA-NPICVVS  261 (456)
T ss_dssp             SEEEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred             ceEEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEEC
Confidence            99999999999999999999999775 78899999843   78999999999998 9999999999999999 6777788


Q ss_pred             ChhHHHHHHHcCCCeEEecCCCcc---------------cHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCC
Q 020768          215 DDYRLSVAKELGADNIVKVSTNLQ---------------DIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGG  279 (321)
Q Consensus       215 ~~~~~~~~~~~g~~~vi~~~~~~~---------------~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G  279 (321)
                      +++|.++++++|++.++++.+.+.               ++.+.++++  +.+.++|+||||+|+ ..+..++++++++|
T Consensus       262 ~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~--t~g~g~Dvvid~~G~-~~~~~~~~~l~~~G  338 (456)
T 3krt_A          262 SPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIREL--TGGEDIDIVFEHPGR-ETFGASVFVTRKGG  338 (456)
T ss_dssp             SHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHH--HTSCCEEEEEECSCH-HHHHHHHHHEEEEE
T ss_pred             CHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHH--hCCCCCcEEEEcCCc-hhHHHHHHHhhCCc
Confidence            999999999999999998765321               122444443  235789999999997 78999999999999


Q ss_pred             EEEEEcCCCC-CccccchhhhccceEEEEeehhHHH
Q 020768          280 KVCLVGMGHL-EMTVPLTPAAARYLIYSFLFHFFLI  314 (321)
Q Consensus       280 ~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~~~~  314 (321)
                      +++.+|...+ ..+++...++.+++++.|+..+.+.
T Consensus       339 ~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  374 (456)
T 3krt_A          339 TITTCASTSGYMHEYDNRYLWMSLKRIIGSHFANYR  374 (456)
T ss_dssp             EEEESCCTTCSEEEEEHHHHHHTTCEEEECCSCCHH
T ss_pred             EEEEEecCCCcccccCHHHHHhcCeEEEEeccCCHH
Confidence            9999997654 4578888899999999999865543

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=3.1e-48  Score=358.96  Aligned_cols=280  Identities=19%  Similarity=0.307  Sum_probs=241.6

Q ss_pred             ceeEEEccCCC-eEEEEecCCCCCC-CcEEEEEeEeecccccHhhhhc--cccCCcCCCC---CcccccceeEEEEEeCC
Q 020768           18 NMAAWLLGVNT-LKIQPFELPSLGP-YDVLVRMKAVGICGSDVHYLKT--LRCADFVVKE---PMVIGHECAGVIEKVGS   90 (321)
Q Consensus        18 ~~a~~~~~~~~-l~~~e~~~p~~~~-~evlVkv~a~~l~~~D~~~~~g--~~~~~~~~~~---p~~~G~e~vG~V~~vG~   90 (321)
                      |||+++.+++. ++++++|.|+|++ +||||||.++++|++|++++.|  .++.   ..+   |.++|||++|+|++  +
T Consensus         1 MkA~~~~~~g~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~---~~~~~~p~v~G~E~~G~V~~--~   75 (366)
T 2cdc_A            1 MKAIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLST---LPKGKDFLVLGHEAIGVVEE--S   75 (366)
T ss_dssp             CEEEEECTTSCCCEEEECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC----------CCSCEECCSEEEEEECS--C
T ss_pred             CeEEEEeCCCCceEEEECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCCCC---CCcCCCCCcCCcceEEEEEe--C
Confidence            79999987766 9999999999999 9999999999999999999987  4321   345   89999999999999  6


Q ss_pred             CCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCcccc--ccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhH
Q 020768           91 EVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS  168 (321)
Q Consensus        91 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~  168 (321)
                      + ++|++||+|++.+..+|++|.+|+.+++++|.+...+  +....+|+|+||++++++.++++|++++ ++|++..+++
T Consensus        76 ~-~~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~-~~Aal~~~~~  153 (366)
T 2cdc_A           76 Y-HGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKYLVKIPKSIE-DIGILAQPLA  153 (366)
T ss_dssp             C-SSCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEEETTBEECCSCBSEEEECGGGEEEECGGGT-TTGGGHHHHH
T ss_pred             C-CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCcccCCccCCCCceeEEEEechHHeEECcCCcc-hhhhhcCcHH
Confidence            7 8999999999999899999999999999999987655  3222579999999999999999999999 8888777999


Q ss_pred             HHHHHHH-----HcCCC--C-------CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh---hHHHHHHHcCCCeEE
Q 020768          169 VGLHACR-----RANIG--P-------ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD---YRLSVAKELGADNIV  231 (321)
Q Consensus       169 ~a~~~l~-----~~~~~--~-------g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~---~~~~~~~~~g~~~vi  231 (321)
                      |||++++     .++++  +       |++|||+|+|++|++++|+|+.+|+ +|+++++++   ++.++++++|++.+ 
T Consensus       154 ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~~ga~~v-  231 (366)
T 2cdc_A          154 DIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIEETKTNYY-  231 (366)
T ss_dssp             HHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHHHTCEEE-
T ss_pred             HHHHHHHhhhhcccCccccccccccCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHHHhCCcee-
Confidence            9999997     78888  8       9999999999999999999999999 799999988   89999999999887 


Q ss_pred             ecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHH-HHHHHHcccCCEEEEEcCCCCC-ccccchh---hhccceEEE
Q 020768          232 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTM-STALSATRAGGKVCLVGMGHLE-MTVPLTP---AAARYLIYS  306 (321)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~---~~~k~~~i~  306 (321)
                      + .+   ++.+.+.+ .  . .++|++||++|.+..+ +.++++|+++|+++.+|..... .+++...   ++.|++++.
T Consensus       232 ~-~~---~~~~~~~~-~--~-~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~  303 (366)
T 2cdc_A          232 N-SS---NGYDKLKD-S--V-GKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSGSVPLDYKTLQEIVHTNKTII  303 (366)
T ss_dssp             E-CT---TCSHHHHH-H--H-CCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCSCEEEEEHHHHHHHHHTTCEEE
T ss_pred             c-hH---HHHHHHHH-h--C-CCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCCCccccChhhhHHHHhcCcEEE
Confidence            6 32   55555554 2  2 6899999999987788 9999999999999999977654 6778777   899999999


Q ss_pred             EeehhHHH
Q 020768          307 FLFHFFLI  314 (321)
Q Consensus       307 g~~~~~~~  314 (321)
                      |+..+...
T Consensus       304 g~~~~~~~  311 (366)
T 2cdc_A          304 GLVNGQKP  311 (366)
T ss_dssp             ECCCCCHH
T ss_pred             EecCCCHH
Confidence            98765433

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=2e-46  Score=343.74  Aligned_cols=269  Identities=23%  Similarity=0.293  Sum_probs=224.3

Q ss_pred             CCcccccchhhceeEEEcc---CCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeE
Q 020768            7 SQGEKEDGEEVNMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAG   83 (321)
Q Consensus         7 ~~~~~~~~~~~~~a~~~~~---~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG   83 (321)
                      ++++.+.+|.+||++++..   ++.++++|+|.|+|+++||||||.+++||++|++++.|.+..  ...+|.++|||++|
T Consensus        11 ~~~~~~~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~v~G~E~~G   88 (342)
T 4eye_A           11 TLEAQTQGPGSMKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQL--KMEPPFVPGIETAG   88 (342)
T ss_dssp             -------CCCEEEEEEECSSSGGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSSS--CCCSSBCCCSEEEE
T ss_pred             CCcccccCCcceEEEEEecCCCCceeEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC--CCCCCCccceeEEE
Confidence            4466778899999999985   456999999999999999999999999999999999886532  24679999999999


Q ss_pred             EEEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhc-
Q 020768           84 VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA-  162 (321)
Q Consensus        84 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa-  162 (321)
                      +|+++|++++ |++||+|++.                            ..+|+|+||++++++.++++|+++++++|| 
T Consensus        89 ~V~~vG~~v~-~~vGDrV~~~----------------------------~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~  139 (342)
T 4eye_A           89 VVRSAPEGSG-IKPGDRVMAF----------------------------NFIGGYAERVAVAPSNILPTPPQLDDAEAVA  139 (342)
T ss_dssp             EEEECCTTSS-CCTTCEEEEE----------------------------CSSCCSBSEEEECGGGEEECCTTSCHHHHHH
T ss_pred             EEEEECCCCC-CCCCCEEEEe----------------------------cCCCcceEEEEEcHHHeEECCCCCCHHHHHH
Confidence            9999999999 9999999875                            246999999999999999999999999986 


Q ss_pred             cchhhHHHHHHH-HHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccH
Q 020768          163 MCEPLSVGLHAC-RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI  240 (321)
Q Consensus       163 ~~~~~~~a~~~l-~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~  240 (321)
                      +..+++|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++++|++.+++++   .++
T Consensus       140 l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~v~~~~---~~~  215 (342)
T 4eye_A          140 LIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVGADIVLPLE---EGW  215 (342)
T ss_dssp             HTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEESS---TTH
T ss_pred             hhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEecCc---hhH
Confidence            456899999999 6689999999999998 9999999999999999 799999999999999999999998865   466


Q ss_pred             HHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC-ccccchhhhccceEEEEeehhHH
Q 020768          241 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE-MTVPLTPAAARYLIYSFLFHFFL  313 (321)
Q Consensus       241 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~k~~~i~g~~~~~~  313 (321)
                      .+.+.++.  .+.++|++|||+|+ ..+..++++++++|+++.+|...+. ..++...++.|++++.|+..+.+
T Consensus       216 ~~~v~~~~--~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  286 (342)
T 4eye_A          216 AKAVREAT--GGAGVDMVVDPIGG-PAFDDAVRTLASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWGEF  286 (342)
T ss_dssp             HHHHHHHT--TTSCEEEEEESCC---CHHHHHHTEEEEEEEEEC----------CCCCGGGTTCEEEECCHHHH
T ss_pred             HHHHHHHh--CCCCceEEEECCch-hHHHHHHHhhcCCCEEEEEEccCCCCCccCHHHHhhcCCEEEEEehhhh
Confidence            66666542  35589999999997 5789999999999999999976543 46778888999999999986543

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=9.3e-46  Score=340.74  Aligned_cols=266  Identities=21%  Similarity=0.242  Sum_probs=233.4

Q ss_pred             ccccchhhceeEEEcc---CCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEE
Q 020768           10 EKEDGEEVNMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE   86 (321)
Q Consensus        10 ~~~~~~~~~~a~~~~~---~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~   86 (321)
                      ...++|.+|||+++.+   ++.++++++|.|+|+++||+|||.+++||++|++.+.|.+...  ..+|.++|||++|+|+
T Consensus        21 ~~~~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~~p~i~G~E~~G~V~   98 (353)
T 4dup_A           21 QSMSLPQEMRFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPP--KDASPILGLELSGEIV   98 (353)
T ss_dssp             --CCCCSSEEEEEESSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSCCC--TTSCSSSCCEEEEEEE
T ss_pred             ecCCCChheeEEEEccCCCccceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCC--CCCCCccccccEEEEE
Confidence            4446889999999986   4569999999999999999999999999999999998865432  4568999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-h
Q 020768           87 KVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-E  165 (321)
Q Consensus        87 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~  165 (321)
                      ++|++|++|++||+|...                            ..+|+|+||++++++.++++|+++++++||.+ .
T Consensus        99 ~vG~~v~~~~vGdrV~~~----------------------------~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~  150 (353)
T 4dup_A           99 GVGPGVSGYAVGDKVCGL----------------------------ANGGAYAEYCLLPAGQILPFPKGYDAVKAAALPE  150 (353)
T ss_dssp             EECTTCCSCCTTCEEEEE----------------------------CSSCCSBSEEEEEGGGEEECCTTCCHHHHHTSHH
T ss_pred             EECCCCCCCCCCCEEEEe----------------------------cCCCceeeEEEEcHHHcEeCCCCCCHHHHhhhhh
Confidence            999999999999999875                            24699999999999999999999999999855 5


Q ss_pred             hhHHHHHHH-HHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHH
Q 020768          166 PLSVGLHAC-RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEE  243 (321)
Q Consensus       166 ~~~~a~~~l-~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~  243 (321)
                      +++|||+++ +.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.++++++|++.++++.+  .++.+.
T Consensus       151 ~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~~~~--~~~~~~  227 (353)
T 4dup_A          151 TFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERLGAKRGINYRS--EDFAAV  227 (353)
T ss_dssp             HHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTT--SCHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEeCCc--hHHHHH
Confidence            889999998 6689999999999966 9999999999999999 7999999999999999999999988654  566666


Q ss_pred             HHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC-cc-ccchhhhccceEEEEeehhH
Q 020768          244 VEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE-MT-VPLTPAAARYLIYSFLFHFF  312 (321)
Q Consensus       244 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~-~~~~~~~~k~~~i~g~~~~~  312 (321)
                      +.++.   +.++|++|||+|+ ..++.++++|+++|+++.+|...+. .. +++..++.|++++.|+..+.
T Consensus       228 ~~~~~---~~g~Dvvid~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~  294 (353)
T 4dup_A          228 IKAET---GQGVDIILDMIGA-AYFERNIASLAKDGCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGSTMRP  294 (353)
T ss_dssp             HHHHH---SSCEEEEEESCCG-GGHHHHHHTEEEEEEEEECCCTTCSEEEEEECHHHHHTTCEEEECCSTT
T ss_pred             HHHHh---CCCceEEEECCCH-HHHHHHHHHhccCCEEEEEEecCCCcccCCCHHHHHhcCceEEEEeccc
Confidence            66653   6789999999997 5889999999999999999976553 34 88888999999999998644

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=2.3e-45  Score=339.25  Aligned_cols=267  Identities=19%  Similarity=0.206  Sum_probs=227.2

Q ss_pred             cccccchhhceeEEEc------cCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCccccccee
Q 020768            9 GEKEDGEEVNMAAWLL------GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECA   82 (321)
Q Consensus         9 ~~~~~~~~~~~a~~~~------~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~v   82 (321)
                      .+..-+|++|||+++.      ++..++++|+|.|+|+++||+|||.+++||++|++++.|....   ..+|.++|||++
T Consensus        14 ~~~~~~m~~MkA~~~~~~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~p~v~G~E~~   90 (363)
T 4dvj_A           14 GTENLYFQSMKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPD---GTDWKVIGYDAA   90 (363)
T ss_dssp             -----CCCEEEEEEBSSCCCTTSTTSSEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC-----CCSBCCCCCEE
T ss_pred             cchhhhhheeEEEEEeccCCCCCCceEEEeecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCCC---CCCCCcccceeE
Confidence            3444556789999995      3577999999999999999999999999999999999886532   467999999999


Q ss_pred             EEEEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhc
Q 020768           83 GVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA  162 (321)
Q Consensus        83 G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa  162 (321)
                      |+|+++|++|++|++||+|+....                         ...+|+|+||++++++.++++|+++++++||
T Consensus        91 G~V~~vG~~v~~~~vGdrV~~~~~-------------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa  145 (363)
T 4dvj_A           91 GIVSAVGPDVTLFRPGDEVFYAGS-------------------------IIRPGTNAEFHLVDERIVGRKPKTLDWAEAA  145 (363)
T ss_dssp             EEEEEECTTCCSCCTTCEEEECCC-------------------------TTSCCSCBSEEEEEGGGCEECCTTSCHHHHH
T ss_pred             EEEEEeCCCCCCCCCCCEEEEccC-------------------------CCCCccceEEEEeCHHHeeECCCCCCHHHHH
Confidence            999999999999999999986421                         1357999999999999999999999999999


Q ss_pred             cch-hhHHHHHHH-HHcCCC-----CCCEEEEEcC-ChhHHHHHHHHHHc-CCCeEEEEeCChhHHHHHHHcCCCeEEec
Q 020768          163 MCE-PLSVGLHAC-RRANIG-----PETNVLIMGA-GPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKELGADNIVKV  233 (321)
Q Consensus       163 ~~~-~~~~a~~~l-~~~~~~-----~g~~vlI~Ga-g~vG~~a~qla~~~-g~~~vv~v~~~~~~~~~~~~~g~~~vi~~  233 (321)
                      +++ .+.+||+++ +.++++     +|++|||+|+ |++|++++|+|+++ |+ +|++++++++|.++++++|++.++++
T Consensus       146 ~l~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~-~Vi~~~~~~~~~~~~~~lGad~vi~~  224 (363)
T 4dvj_A          146 ALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDL-TVIATASRPETQEWVKSLGAHHVIDH  224 (363)
T ss_dssp             TSHHHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCS-EEEEECSSHHHHHHHHHTTCSEEECT
T ss_pred             hhhhHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHcCCCEEEeC
Confidence            775 566899998 557888     8999999995 99999999999985 66 89999999999999999999999986


Q ss_pred             CCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehhHH
Q 020768          234 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFL  313 (321)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~  313 (321)
                      .+   ++.+.++++   .+.++|+||||+|++..++.++++|+++|+++.+|.   ..++++..++.|++++.|++.+..
T Consensus       225 ~~---~~~~~v~~~---~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~---~~~~~~~~~~~k~~~i~~~~~~~~  295 (363)
T 4dvj_A          225 SK---PLAAEVAAL---GLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLIDD---PSAFDIMLFKRKAVSIHHELMFTR  295 (363)
T ss_dssp             TS---CHHHHHHTT---CSCCEEEEEECSCHHHHHHHHHHHSCTTCEEEECSC---CSSCCGGGGTTTTCEEEECCTTHH
T ss_pred             CC---CHHHHHHHh---cCCCceEEEECCCchhhHHHHHHHhcCCCEEEEECC---CCccchHHHhhccceEEEEEeecc
Confidence            53   555555543   467899999999987789999999999999999964   346788889999999999887654

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=3.1e-45  Score=334.84  Aligned_cols=261  Identities=24%  Similarity=0.321  Sum_probs=228.2

Q ss_pred             ccchhhceeEEEccCC---CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEe
Q 020768           12 EDGEEVNMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV   88 (321)
Q Consensus        12 ~~~~~~~~a~~~~~~~---~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~v   88 (321)
                      .++|++||++++.+++   .++++++|.|+|+++||||||.+++||++|++++.|.++    ..+|+++|||++|+|+++
T Consensus         3 ~~~p~~mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~----~~~P~i~G~e~~G~V~~v   78 (334)
T 3qwb_A            3 CTIPEQQKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYP----CEKPYVLGREASGTVVAK   78 (334)
T ss_dssp             --CCSEEEEEEESSSSSGGGEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHHTSSC----CCSSEECCSEEEEEEEEE
T ss_pred             CCCchheEEEEEecCCCCceeEEEeccCCCCCCCEEEEEEEEEecCHHHHHHHCCCCC----CCCCCccccceEEEEEEE
Confidence            3578889999998654   499999999999999999999999999999999887653    457999999999999999


Q ss_pred             CCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEec-CCcEEECCCCCChhh---hccc
Q 020768           89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHP-ADLCFKLPDNVSLEE---GAMC  164 (321)
Q Consensus        89 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~-~~~~~~ip~~~~~~~---aa~~  164 (321)
                      |++|++|++||+|.+.                             .+|+|+||++++ ++.++++|+++++++   ||.+
T Consensus        79 G~~v~~~~~GdrV~~~-----------------------------~~G~~aey~~v~~~~~~~~~P~~~~~~~~~~aa~~  129 (334)
T 3qwb_A           79 GKGVTNFEVGDQVAYI-----------------------------SNSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAG  129 (334)
T ss_dssp             CTTCCSCCTTCEEEEE-----------------------------CSSCSBSEEEEETTSSEEECCTTCCHHHHHHHHHH
T ss_pred             CCCCCCCCCCCEEEEe-----------------------------eCCcceEEEEecCcceEEECCCCCCHHHhhhhhhh
Confidence            9999999999999875                             359999999999 999999999999999   6543


Q ss_pred             -hhhHHHHHHHHH-cCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHH
Q 020768          165 -EPLSVGLHACRR-ANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA  241 (321)
Q Consensus       165 -~~~~~a~~~l~~-~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~  241 (321)
                       ....++|+++.. .++++|++|||+|+ |++|++++|+|+..|+ +|++++++++|.++++++|++.++++.+  .++.
T Consensus       130 ~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~~~--~~~~  206 (334)
T 3qwb_A          130 LLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKEYGAEYLINASK--EDIL  206 (334)
T ss_dssp             HHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTT--SCHH
T ss_pred             hhHHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEEeCCC--chHH
Confidence             467789998865 68999999999996 9999999999999999 7999999999999999999999988654  5666


Q ss_pred             HHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC-ccccchhhhccceEEEEeehh
Q 020768          242 EEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE-MTVPLTPAAARYLIYSFLFHF  311 (321)
Q Consensus       242 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~k~~~i~g~~~~  311 (321)
                      +.+.++.  .+.++|++|||+|+ ..++.++++|+++|+++.+|..... .+++...++.|++++.|+..+
T Consensus       207 ~~~~~~~--~~~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (334)
T 3qwb_A          207 RQVLKFT--NGKGVDASFDSVGK-DTFEISLAALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLY  274 (334)
T ss_dssp             HHHHHHT--TTSCEEEEEECCGG-GGHHHHHHHEEEEEEEEECCCTTCCCCCBCGGGGTTTTCEEECCCGG
T ss_pred             HHHHHHh--CCCCceEEEECCCh-HHHHHHHHHhccCCEEEEEcCCCCCCCCcchhhhhhCceEEEEEEec
Confidence            6666542  35689999999997 7899999999999999999976554 478888899999999987654

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=9.2e-45  Score=336.25  Aligned_cols=263  Identities=20%  Similarity=0.224  Sum_probs=219.3

Q ss_pred             chhhceeEEEccCCCeEEE-EecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCC
Q 020768           14 GEEVNMAAWLLGVNTLKIQ-PFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (321)
Q Consensus        14 ~~~~~~a~~~~~~~~l~~~-e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v   92 (321)
                      +|.+||++++.+++.++++ ++|.|+|+++||||||.+++||++|++++.+.      ..+|.++|||++|+|+++|++|
T Consensus         8 ~p~~mkA~v~~~~~~l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~------~~~p~v~G~e~~G~V~~vG~~v   81 (371)
T 3gqv_A            8 PPPQQTALTVNDHDEVTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQF------ATPWAFLGTDYAGTVVAVGSDV   81 (371)
T ss_dssp             CCSCEEEEEECTTSCEEEEEEECCCCCCTTSEEEEEEEEECCGGGGC-----------CCTTSCCCSEEEEEEEEECTTC
T ss_pred             CchhceeEEEcCCCceEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcC------CCCCccCccccEEEEEEeCCCC
Confidence            7788999999999999999 99999999999999999999999999988762      3468999999999999999999


Q ss_pred             CCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHH
Q 020768           93 KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGL  171 (321)
Q Consensus        93 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~  171 (321)
                      ++|++||+|...       |..|..+.             ..+|+|+||++++++.++++|+++++++||+++ .+.+||
T Consensus        82 ~~~~~GdrV~~~-------~~~~~~~~-------------~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~ta~  141 (371)
T 3gqv_A           82 THIQVGDRVYGA-------QNEMCPRT-------------PDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAG  141 (371)
T ss_dssp             CSCCTTCEEEEE-------CCTTCTTC-------------TTCCSSBSEEECCTTCEEECCTTCCHHHHHTSHHHHHHHH
T ss_pred             CCCCCCCEEEEe-------ccCCCCCC-------------CCCCcCcCeEEEchhheEECCCCCCHHHHhhhhhhHHHHH
Confidence            999999999754       34444332             357999999999999999999999999999775 567899


Q ss_pred             HHH-HH-cCC-----------CCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCc
Q 020768          172 HAC-RR-ANI-----------GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL  237 (321)
Q Consensus       172 ~~l-~~-~~~-----------~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~  237 (321)
                      +++ +. .++           ++|++|||+|+ |++|++++|+|+++|+ +|+++. +++|.++++++|++.++++.+  
T Consensus       142 ~~l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~~-~~~~~~~~~~lGa~~vi~~~~--  217 (371)
T 3gqv_A          142 LAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATC-SPHNFDLAKSRGAEEVFDYRA--  217 (371)
T ss_dssp             HHHHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHHTTCSEEEETTS--
T ss_pred             HHHHhhccCCCCCccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe-CHHHHHHHHHcCCcEEEECCC--
Confidence            998 45 443           89999999999 9999999999999999 677775 789999999999999998754  


Q ss_pred             ccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHc-ccCCEEEEEcCCCC------Cccccc---hhhhccceEEEE
Q 020768          238 QDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSAT-RAGGKVCLVGMGHL------EMTVPL---TPAAARYLIYSF  307 (321)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l-~~~G~~v~~g~~~~------~~~~~~---~~~~~k~~~i~g  307 (321)
                      .++.+.++++.   ++++|++|||+|++..++.++++| +++|+++.+|....      ..+++.   ..++.|++++.|
T Consensus       218 ~~~~~~v~~~t---~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~g  294 (371)
T 3gqv_A          218 PNLAQTIRTYT---KNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPA  294 (371)
T ss_dssp             TTHHHHHHHHT---TTCCCEEEESSCSHHHHHHHHHHSCTTCEEEEESSCCCC---CCSCEEEEECCGGGGGTSCBSCST
T ss_pred             chHHHHHHHHc---cCCccEEEECCCchHHHHHHHHHhhcCCCEEEEEecCccccccccccceeeeeeeeeccccccccc
Confidence            56777666652   446999999999988999999999 59999999995432      122222   247789999998


Q ss_pred             ee
Q 020768          308 LF  309 (321)
Q Consensus       308 ~~  309 (321)
                      ++
T Consensus       295 ~~  296 (371)
T 3gqv_A          295 PY  296 (371)
T ss_dssp             TT
T ss_pred             cc
Confidence            74

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=1e-44  Score=332.50  Aligned_cols=264  Identities=23%  Similarity=0.294  Sum_probs=225.7

Q ss_pred             chhhceeEEEccCCC-eEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCC
Q 020768           14 GEEVNMAAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (321)
Q Consensus        14 ~~~~~~a~~~~~~~~-l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v   92 (321)
                      +|++||++++.+++. ++++|+|.|+|+++||||||.++++|++|++++.|.... ....+|.++|||++|+|+++|++|
T Consensus         4 ~~~~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~~P~v~G~E~~G~V~~vG~~v   82 (343)
T 3gaz_A            4 TTPTMIAAVVEEANGPFVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPH-AQQPLPAILGMDLAGTVVAVGPEV   82 (343)
T ss_dssp             --CEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCGG-GCCCSSBCCCCEEEEEEEEECTTC
T ss_pred             CchhheEEEEecCCCceEEEeccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCCC-CCCCCCcccCcceEEEEEEECCCC
Confidence            467899999987765 999999999999999999999999999999999875421 124679999999999999999999


Q ss_pred             CCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHH
Q 020768           93 KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGL  171 (321)
Q Consensus        93 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~  171 (321)
                      ++|++||+|+....           +            ....+|+|+||++++++.++++|+++++++||+++ ++.|||
T Consensus        83 ~~~~vGdrV~~~~~-----------g------------~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~  139 (343)
T 3gaz_A           83 DSFRVGDAVFGLTG-----------G------------VGGLQGTHAQFAAVDARLLASKPAALTMRQASVLPLVFITAW  139 (343)
T ss_dssp             CSCCTTCEEEEECC-----------S------------STTCCCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHH
T ss_pred             CCCCCCCEEEEEeC-----------C------------CCCCCcceeeEEEecHHHeeeCCCCCCHHHHHHhhhhHHHHH
Confidence            99999999987421           1            01257999999999999999999999999998775 567899


Q ss_pred             HHH-HHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHH
Q 020768          172 HAC-RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       172 ~~l-~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      +++ +.+++++|++|||+|+ |++|++++|+|+..|+ +|+++ .++++.++++++|++. ++   ...++.+.+.++. 
T Consensus       140 ~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~lGa~~-i~---~~~~~~~~~~~~~-  212 (343)
T 3gaz_A          140 EGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRDLGATP-ID---ASREPEDYAAEHT-  212 (343)
T ss_dssp             HHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHHHTSEE-EE---TTSCHHHHHHHHH-
T ss_pred             HHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHcCCCE-ec---cCCCHHHHHHHHh-
Confidence            998 7799999999999996 9999999999999999 68888 8899999999999988 66   2356666666653 


Q ss_pred             HhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehhHH
Q 020768          250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFL  313 (321)
Q Consensus       250 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~  313 (321)
                       .+.++|++|||+|+ ..++.++++|+++|+++.+|...   .++...++.|++++.|++.+..
T Consensus       213 -~~~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~g~~~---~~~~~~~~~~~~~~~g~~~~~~  271 (343)
T 3gaz_A          213 -AGQGFDLVYDTLGG-PVLDASFSAVKRFGHVVSCLGWG---THKLAPLSFKQATYSGVFTLHT  271 (343)
T ss_dssp             -TTSCEEEEEESSCT-HHHHHHHHHEEEEEEEEESCCCS---CCCCHHHHHTTCEEEECCTTHH
T ss_pred             -cCCCceEEEECCCc-HHHHHHHHHHhcCCeEEEEcccC---ccccchhhhcCcEEEEEEeccc
Confidence             36789999999997 68899999999999999999664   4577788899999999887543

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=1.7e-44  Score=331.56  Aligned_cols=260  Identities=21%  Similarity=0.258  Sum_probs=226.4

Q ss_pred             hhceeEEEcc------CCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeC
Q 020768           16 EVNMAAWLLG------VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG   89 (321)
Q Consensus        16 ~~~~a~~~~~------~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG   89 (321)
                      ++|||+++..      ++.++++++|.|+|+++||||||.+++||++|++.+.|.     ...+|.++|||++|+|+++|
T Consensus         1 m~MkA~~~~~~G~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~-----~~~~p~i~G~e~~G~V~~vG   75 (346)
T 3fbg_A            1 MSLKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMD-----VSKAPRVLGFDAIGVVESVG   75 (346)
T ss_dssp             -CEEEEEBSSCCCGGGCCCCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHTTSC-----CSSSCBCCCCCEEEEEEEEC
T ss_pred             CCcEEEEEEeccccCCCceeEeccccCCCCCCCEEEEEEEEEEcCHHHHHHHhCC-----CCCCCcCcCCccEEEEEEeC
Confidence            3699999984      458999999999999999999999999999999988875     15679999999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhH
Q 020768           90 SEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLS  168 (321)
Q Consensus        90 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~  168 (321)
                      ++|++|++||+|+....                         ...+|+|+||++++++.++++|+++++++||+++ ++.
T Consensus        76 ~~v~~~~~GdrV~~~~~-------------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~  130 (346)
T 3fbg_A           76 NEVTMFNQGDIVYYSGS-------------------------PDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGI  130 (346)
T ss_dssp             TTCCSCCTTCEEEECCC-------------------------TTSCCSSBSEEEEEGGGEEECCSSSCHHHHTTSHHHHH
T ss_pred             CCCCcCCCCCEEEEcCC-------------------------CCCCcceeEEEEEChHHeEECCCCCCHHHhhhcchhHH
Confidence            99999999999987421                         1357999999999999999999999999999775 556


Q ss_pred             HHHHHH-HHcCCC------CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccH
Q 020768          169 VGLHAC-RRANIG------PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI  240 (321)
Q Consensus       169 ~a~~~l-~~~~~~------~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~  240 (321)
                      +||+++ +.++++      +|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++++|++.++++++   ++
T Consensus       131 ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~---~~  206 (346)
T 3fbg_A          131 TAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKKMGADIVLNHKE---SL  206 (346)
T ss_dssp             HHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHHHHHTCSEEECTTS---CH
T ss_pred             HHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEECCc---cH
Confidence            899998 468888      9999999965 9999999999999999 7999999999999999999999988653   56


Q ss_pred             HHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehhHHH
Q 020768          241 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFLI  314 (321)
Q Consensus       241 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~  314 (321)
                      .+.++++   .+.++|++|||+|++..++.++++|+++|+++.++..  ..++++..++.|++++.|++.+...
T Consensus       207 ~~~~~~~---~~~g~Dvv~d~~g~~~~~~~~~~~l~~~G~iv~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  275 (346)
T 3fbg_A          207 LNQFKTQ---GIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAF--ENDQDLNALKPKSLSFSHEFMFARP  275 (346)
T ss_dssp             HHHHHHH---TCCCEEEEEESSCHHHHHHHHHHHEEEEEEEEESSCC--SSCBCGGGGTTTTCEEEECCTTHHH
T ss_pred             HHHHHHh---CCCCccEEEECCCchHHHHHHHHHhccCCEEEEECCC--CCCCccccccccceEEEEEEEeccc
Confidence            6666554   4678999999999877889999999999999998843  3467778889999999998876543

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=1.9e-45  Score=338.19  Aligned_cols=268  Identities=18%  Similarity=0.174  Sum_probs=227.2

Q ss_pred             ccchhhceeEEEc------cCCCeEEEEe---------cCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcc
Q 020768           12 EDGEEVNMAAWLL------GVNTLKIQPF---------ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMV   76 (321)
Q Consensus        12 ~~~~~~~~a~~~~------~~~~l~~~e~---------~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~   76 (321)
                      ..+|.+|||+++.      +++.++++|+         |.|+|+++||||||.+++||++|++++.|.+..  ...+|.+
T Consensus         5 m~~p~~mka~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~~~p~v   82 (349)
T 3pi7_A            5 MTIPSEMKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQ--PRVKGRP   82 (349)
T ss_dssp             CCCCSEEEEEEECSCBSCSSCCCSCCCCSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSS--CBCTTSB
T ss_pred             CCCchhheEEEEEccccCCCcccceEEEeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCCC--CCCCCCC
Confidence            3477889999998      4677888888         999999999999999999999999999986532  2467999


Q ss_pred             cccceeEEEEEeCCCC-CCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCC
Q 020768           77 IGHECAGVIEKVGSEV-KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN  155 (321)
Q Consensus        77 ~G~e~vG~V~~vG~~v-~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~  155 (321)
                      +|||++|+|+++|++| ++|++||+|++...                         ...+|+|+||++++++.++++|++
T Consensus        83 ~G~E~~G~V~~vG~~v~~~~~vGdrV~~~~g-------------------------~~~~G~~aey~~v~~~~~~~iP~~  137 (349)
T 3pi7_A           83 AGFEGVGTIVAGGDEPYAKSLVGKRVAFATG-------------------------LSNWGSWAEYAVAEAAACIPLLDT  137 (349)
T ss_dssp             CCSEEEEEEEEECSSHHHHHHTTCEEEEECT-------------------------TSSCCSSBSEEEEEGGGEEECCTT
T ss_pred             ccceEEEEEEEECCCccCCCCCCCEEEEecc-------------------------CCCCccceeeEeechHHeEECCCC
Confidence            9999999999999999 99999999997631                         235799999999999999999999


Q ss_pred             CChhhhccch-hhHHHHHHHHHcCCCCC-CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEe
Q 020768          156 VSLEEGAMCE-PLSVGLHACRRANIGPE-TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVK  232 (321)
Q Consensus       156 ~~~~~aa~~~-~~~~a~~~l~~~~~~~g-~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~  232 (321)
                      +++++||.+. ...+||++++.++ ++| +++||+|+ |++|++++|+|+++|+ +|++++++++|.++++++|++.+++
T Consensus       138 ~~~~~aa~l~~~~~ta~~~~~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~  215 (349)
T 3pi7_A          138 VRDEDGAAMIVNPLTAIAMFDIVK-QEGEKAFVMTAGASQLCKLIIGLAKEEGF-RPIVTVRRDEQIALLKDIGAAHVLN  215 (349)
T ss_dssp             CCC--GGGSSHHHHHHHHHHHHHH-HHCCSEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHTCSEEEE
T ss_pred             CCHHHHhhccccHHHHHHHHHHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEE
Confidence            9999998553 5667887777766 667 68899865 9999999999999999 7999999999999999999999998


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCC-CCccccc-hhhhccceEEEEeeh
Q 020768          233 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-LEMTVPL-TPAAARYLIYSFLFH  310 (321)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~-~~~~~k~~~i~g~~~  310 (321)
                      +++  .++.+.++++..  +.++|++|||+|+ ..+..++++|+++|+++.+|... ....++. ..++.|++++.|+..
T Consensus       216 ~~~--~~~~~~v~~~~~--~~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~  290 (349)
T 3pi7_A          216 EKA--PDFEATLREVMK--AEQPRIFLDAVTG-PLASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHIEGFWL  290 (349)
T ss_dssp             TTS--TTHHHHHHHHHH--HHCCCEEEESSCH-HHHHHHHHHSCTTCEEEECCCSCCSCCCCSCTHHHHHSCCEEEECCH
T ss_pred             CCc--HHHHHHHHHHhc--CCCCcEEEECCCC-hhHHHHHhhhcCCCEEEEEeccCCCCCCCCchhhhhccccEEEEEEe
Confidence            654  567777776543  4689999999997 46689999999999999999654 3566777 788999999999987


Q ss_pred             hHH
Q 020768          311 FFL  313 (321)
Q Consensus       311 ~~~  313 (321)
                      +.+
T Consensus       291 ~~~  293 (349)
T 3pi7_A          291 SEW  293 (349)
T ss_dssp             HHH
T ss_pred             hhh
Confidence            653

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=6.4e-44  Score=328.14  Aligned_cols=266  Identities=22%  Similarity=0.312  Sum_probs=224.9

Q ss_pred             cccccchhhceeEEEccC---CCeEE-EEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEE
Q 020768            9 GEKEDGEEVNMAAWLLGV---NTLKI-QPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV   84 (321)
Q Consensus         9 ~~~~~~~~~~~a~~~~~~---~~l~~-~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~   84 (321)
                      ..+...+.+||++++..+   ..+++ +++|.|+|+++||+|||.++++|++|++++.|.+..  ...+|.++|||++|+
T Consensus        21 ~~m~~~~~~Mka~~~~~~g~~~~l~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~~~P~v~G~E~~G~   98 (351)
T 1yb5_A           21 QSMATGQKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSR--KPLLPYTPGSDVAGV   98 (351)
T ss_dssp             -------CEEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSC--CCCSSBCCCSCEEEE
T ss_pred             hhhccCcceEEEEEEccCCCcceeEEeeecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC--CCCCCCcCCceeEEE
Confidence            344455667999999753   46899 899999999999999999999999999998875422  145799999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc
Q 020768           85 IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC  164 (321)
Q Consensus        85 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~  164 (321)
                      |+++|++|++|++||+|++.+                           ..+|+|+||++++++.++++|+++++++||.+
T Consensus        99 V~~vG~~v~~~~vGdrV~~~~---------------------------~~~G~~aey~~v~~~~~~~~P~~l~~~~aA~l  151 (351)
T 1yb5_A           99 IEAVGDNASAFKKGDRVFTSS---------------------------TISGGYAEYALAADHTVYKLPEKLDFKQGAAI  151 (351)
T ss_dssp             EEEECTTCTTCCTTCEEEESC---------------------------CSSCSSBSEEEEEGGGEEECCTTSCHHHHTTT
T ss_pred             EEEECCCCCCCCCCCEEEEeC---------------------------CCCCcceeEEEECHHHeEECCCCCCHHHHHhh
Confidence            999999999999999998752                           13599999999999999999999999998866


Q ss_pred             h-hhHHHHHHHH-HcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHH
Q 020768          165 E-PLSVGLHACR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA  241 (321)
Q Consensus       165 ~-~~~~a~~~l~-~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~  241 (321)
                      + +++|||+++. .+++++|++|||+|+ |++|++++|+++..|+ .|+++++++++.++++++|++.++++.+  .++.
T Consensus       152 ~~~~~ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~d~~~--~~~~  228 (351)
T 1yb5_A          152 GIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFNHRE--VNYI  228 (351)
T ss_dssp             HHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTS--TTHH
T ss_pred             hhHHHHHHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHcCCCEEEeCCC--chHH
Confidence            5 8899999996 689999999999998 9999999999999999 7999999999999999999998888654  4566


Q ss_pred             HHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeeh
Q 020768          242 EEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFH  310 (321)
Q Consensus       242 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~  310 (321)
                      +.+.+..  .+.++|++|||+|+ ..+..++++++++|+++.+|.. +..+++...++.|++++.|+..
T Consensus       229 ~~~~~~~--~~~~~D~vi~~~G~-~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~~~~~~i~g~~~  293 (351)
T 1yb5_A          229 DKIKKYV--GEKGIDIIIEMLAN-VNLSKDLSLLSHGGRVIVVGSR-GTIEINPRDTMAKESSIIGVTL  293 (351)
T ss_dssp             HHHHHHH--CTTCEEEEEESCHH-HHHHHHHHHEEEEEEEEECCCC-SCEEECTHHHHTTTCEEEECCG
T ss_pred             HHHHHHc--CCCCcEEEEECCCh-HHHHHHHHhccCCCEEEEEecC-CCCccCHHHHHhCCcEEEEEEe
Confidence            6665542  35589999999996 5788999999999999999964 3456777788999999999853

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=3.3e-44  Score=330.49  Aligned_cols=266  Identities=19%  Similarity=0.241  Sum_probs=225.1

Q ss_pred             cccccchhhceeEEEccCC---CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEE
Q 020768            9 GEKEDGEEVNMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVI   85 (321)
Q Consensus         9 ~~~~~~~~~~~a~~~~~~~---~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V   85 (321)
                      .....++.+||++++.+++   .++++++|.|+|+++||+|||.+++||++|++.+.|.+...  ..+|.++|||++|+|
T Consensus        14 ~~~~~~~~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~--~~~p~v~G~E~~G~V   91 (354)
T 2j8z_A           14 GTENLYFQSMLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPP--PGASNILGLEASGHV   91 (354)
T ss_dssp             -------CEEEEEEESSCSSGGGEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCC--TTSCSSSCSEEEEEE
T ss_pred             cccccchhheeEEEEccCCCccceEEeecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCCC--CCCCcccceeeEEEE
Confidence            4566788889999998654   59999999999999999999999999999999998854321  356899999999999


Q ss_pred             EEeCCCC-CCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc
Q 020768           86 EKVGSEV-KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC  164 (321)
Q Consensus        86 ~~vG~~v-~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~  164 (321)
                      +++|++| ++|++||+|++.                            ..+|+|+||++++++.++++|+++++++||.+
T Consensus        92 ~~vG~~v~~~~~vGdrV~~~----------------------------~~~G~~aey~~v~~~~~~~iP~~ls~~~aa~l  143 (354)
T 2j8z_A           92 AELGPGCQGHWKIGDTAMAL----------------------------LPGGGQAQYVTVPEGLLMPIPEGLTLTQAAAI  143 (354)
T ss_dssp             EEECSCC--CCCTTCEEEEE----------------------------CSSCCSBSEEEEEGGGEEECCTTCCHHHHTTS
T ss_pred             EEECCCcCCCCCCCCEEEEe----------------------------cCCCcceeEEEeCHHHcEECCCCCCHHHHHhc
Confidence            9999999 999999999875                            13599999999999999999999999998765


Q ss_pred             -hhhHHHHHHH-HHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHH
Q 020768          165 -EPLSVGLHAC-RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA  241 (321)
Q Consensus       165 -~~~~~a~~~l-~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~  241 (321)
                       .+++|||+++ +.+++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++++|++.++++.+  .++.
T Consensus       144 ~~~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~  220 (354)
T 2j8z_A          144 PEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEKLGAAAGFNYKK--EDFS  220 (354)
T ss_dssp             HHHHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTCSEEEETTT--SCHH
T ss_pred             cchHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecCC--hHHH
Confidence             4889999999 5689999999999996 9999999999999999 7999999999999999999998888654  4566


Q ss_pred             HHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-Cccccc-hhhhccceEEEEeeh
Q 020768          242 EEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPL-TPAAARYLIYSFLFH  310 (321)
Q Consensus       242 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~-~~~~~k~~~i~g~~~  310 (321)
                      +.+.+..  .+.++|++|||+|+. .++.++++|+++|+++.+|...+ ..+++. ..++.|++++.|+..
T Consensus       221 ~~~~~~~--~~~~~d~vi~~~G~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~  288 (354)
T 2j8z_A          221 EATLKFT--KGAGVNLILDCIGGS-YWEKNVNCLALDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLL  288 (354)
T ss_dssp             HHHHHHT--TTSCEEEEEESSCGG-GHHHHHHHEEEEEEEEECCCTTCSCCCSCHHHHHHHTTCEEEECCS
T ss_pred             HHHHHHh--cCCCceEEEECCCch-HHHHHHHhccCCCEEEEEeccCCCccCCChhHHHHhCCCEEEEEEc
Confidence            6655542  245799999999975 78899999999999999997654 356777 778899999999865

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=1.6e-45  Score=334.15  Aligned_cols=250  Identities=23%  Similarity=0.296  Sum_probs=204.7

Q ss_pred             hhhceeEEEc-cCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCC
Q 020768           15 EEVNMAAWLL-GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (321)
Q Consensus        15 ~~~~~a~~~~-~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~   93 (321)
                      |+|||++++. +++.++++++|.|+|+++||||||.++++|++|++++.|.+..   ..+|.++|||++|+|+++|++|+
T Consensus         2 M~tMka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~   78 (315)
T 3goh_A            2 MEQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPIN---WSNGHVPGVDGAGVIVKVGAKVD   78 (315)
T ss_dssp             CCEEEEEEEETTTTEEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTTC---CCTTCCCCSEEEEEEEEECTTSC
T ss_pred             CcceEEEEEeCCCCeeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCCc---CCCCCEeeeeeEEEEEEeCCCCC
Confidence            4679999998 6889999999999999999999999999999999999886532   46799999999999999999999


Q ss_pred             CCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhcc-chhhHHHHH
Q 020768           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAM-CEPLSVGLH  172 (321)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~-~~~~~~a~~  172 (321)
                      +|++||+|+..+.                         ...+|+|+||++++++.++++|+++++++||. ..+++|||+
T Consensus        79 ~~~vGdrV~~~~~-------------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~  133 (315)
T 3goh_A           79 SKMLGRRVAYHTS-------------------------LKRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLTAWQ  133 (315)
T ss_dssp             GGGTTCEEEEECC-------------------------TTSCCSSBSEEEEETTSEEECCTTSCHHHHHTSHHHHHHHHH
T ss_pred             CCCCCCEEEEeCC-------------------------CCCCcccccEEEEcHHHhccCcCCCCHHHHhhCccHHHHHHH
Confidence            9999999998632                         13579999999999999999999999999984 458999999


Q ss_pred             HHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhC
Q 020768          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       173 ~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~  252 (321)
                      +++.+++++|++|||+|+|++|++++|+|+++|+ +|++++ +++|.++++++|++.+++  +     .+.+       +
T Consensus       134 al~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~lGa~~v~~--d-----~~~v-------~  197 (315)
T 3goh_A          134 AFEKIPLTKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKRGVRHLYR--E-----PSQV-------T  197 (315)
T ss_dssp             HHTTSCCCSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHHTEEEEES--S-----GGGC-------C
T ss_pred             HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHcCCCEEEc--C-----HHHh-------C
Confidence            9977999999999999999999999999999999 799998 899999999999998873  1     1111       6


Q ss_pred             CCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCcccc--chhhhccceEEEEee
Q 020768          253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVP--LTPAAARYLIYSFLF  309 (321)
Q Consensus       253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~--~~~~~~k~~~i~g~~  309 (321)
                      .++|++|||+|++ .+..++++|+++|+++.+|.......++  ...+.++++++.|++
T Consensus       198 ~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (315)
T 3goh_A          198 QKYFAIFDAVNSQ-NAAALVPSLKANGHIICIQDRIPAPIDPAFTRTISYHEIALGALH  255 (315)
T ss_dssp             SCEEEEECC--------TTGGGEEEEEEEEEECCC----------CCSEEEEECGGGHH
T ss_pred             CCccEEEECCCch-hHHHHHHHhcCCCEEEEEeCCCCccccchhhhcceeeEEEeeccc
Confidence            7899999999985 5588999999999999998554322222  223444555555444

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=4.1e-44  Score=331.13  Aligned_cols=267  Identities=18%  Similarity=0.213  Sum_probs=222.6

Q ss_pred             hhhceeEEEccCCC----eEEEEecCCCCC--CCcEEEEEeEeecccccHhhhhccccCCcCCCCC---------ccccc
Q 020768           15 EEVNMAAWLLGVNT----LKIQPFELPSLG--PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEP---------MVIGH   79 (321)
Q Consensus        15 ~~~~~a~~~~~~~~----l~~~e~~~p~~~--~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p---------~~~G~   79 (321)
                      |++||++++.+++.    ++++|+|.|.|+  ++||+|||.+++||++|++++.|.++..  ..+|         .++||
T Consensus         1 ~~~mka~~~~~~g~~~~~l~~~~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~~P~~~~~~~p~~i~G~   78 (364)
T 1gu7_A            1 MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSK--PAKTTGFGTTEPAAPCGN   78 (364)
T ss_dssp             CEEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCC--CCCBSTTCCSSCBEECCS
T ss_pred             CceEEEEEeccCCCchheeEEeeccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCC--CCCCccccccCcccccCc
Confidence            46799999987764    899999998887  9999999999999999999998854321  2345         89999


Q ss_pred             ceeEEEEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCC-----
Q 020768           80 ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD-----  154 (321)
Q Consensus        80 e~vG~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~-----  154 (321)
                      |++|+|+++|++|++|++||+|++.+                           ..+|+|+||++++++.++++|+     
T Consensus        79 E~~G~V~~vG~~v~~~~vGdrV~~~~---------------------------~~~G~~aey~~v~~~~~~~~P~~~~~~  131 (364)
T 1gu7_A           79 EGLFEVIKVGSNVSSLEAGDWVIPSH---------------------------VNFGTWRTHALGNDDDFIKLPNPAQSK  131 (364)
T ss_dssp             CCEEEEEEECTTCCSCCTTCEEEESS---------------------------SCCCCSBSEEEEEGGGEEEECCHHHHH
T ss_pred             eeEEEEEEeCCCCCcCCCCCEEEecC---------------------------CCCCcchheEecCHHHeEEcCCccccc
Confidence            99999999999999999999998752                           1359999999999999999998     


Q ss_pred             ------CCChhhhccch-hhHHHHHHHHH-cCCCCC-CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhH----HH
Q 020768          155 ------NVSLEEGAMCE-PLSVGLHACRR-ANIGPE-TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYR----LS  220 (321)
Q Consensus       155 ------~~~~~~aa~~~-~~~~a~~~l~~-~~~~~g-~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~----~~  220 (321)
                            ++++++||+++ ++.|||++++. +++++| ++|||+|+ |++|++++|+|+++|+ .++++.++.++    .+
T Consensus       132 ~~~~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~  210 (364)
T 1gu7_A          132 ANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPNLDEVVA  210 (364)
T ss_dssp             HTTCSCCCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCCTTHHHHHH
T ss_pred             cccccCCCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCC-EEEEEecCccccHHHHH
Confidence                  89999999876 68899999977 689999 99999998 9999999999999999 56666555443    67


Q ss_pred             HHHHcCCCeEEecCCC-cccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-Cccccchhh
Q 020768          221 VAKELGADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPA  298 (321)
Q Consensus       221 ~~~~~g~~~vi~~~~~-~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~  298 (321)
                      +++++|++.++++++. ..++.+.++++....+.++|+||||+|++.. ..++++|+++|+++.+|.... ..+++...+
T Consensus       211 ~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g~Dvvid~~G~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~  289 (364)
T 1gu7_A          211 SLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSS-TGIARKLNNNGLMLTYGGMSFQPVTIPTSLY  289 (364)
T ss_dssp             HHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHH-HHHHHTSCTTCEEEECCCCSSCCEEECHHHH
T ss_pred             HHHhcCCeEEEecCccchHHHHHHHHHHhhccCCCceEEEECCCchhH-HHHHHHhccCCEEEEecCCCCCCcccCHHHH
Confidence            7899999999886431 1456666666531136789999999997655 488999999999999997643 456777788


Q ss_pred             hccceEEEEeehhH
Q 020768          299 AARYLIYSFLFHFF  312 (321)
Q Consensus       299 ~~k~~~i~g~~~~~  312 (321)
                      +.|++++.|++.+.
T Consensus       290 ~~~~~~~~g~~~~~  303 (364)
T 1gu7_A          290 IFKNFTSAGFWVTE  303 (364)
T ss_dssp             HHSCCEEEECCHHH
T ss_pred             hhcCcEEEEEchhH
Confidence            89999999998754

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=2.1e-44  Score=327.54  Aligned_cols=258  Identities=17%  Similarity=0.171  Sum_probs=213.5

Q ss_pred             chhhceeEEEccCC---CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhcc--ccCCcCCCCCcccccceeEEEEEe
Q 020768           14 GEEVNMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTL--RCADFVVKEPMVIGHECAGVIEKV   88 (321)
Q Consensus        14 ~~~~~~a~~~~~~~---~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~--~~~~~~~~~p~~~G~e~vG~V~~v   88 (321)
                      .|++||++++.+++   .++++|+|.|+|+++||||||.++++|++|++++.|.  ........+|.++|||++|+|+++
T Consensus         3 ~m~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~v   82 (321)
T 3tqh_A            3 AMKEMKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIEL   82 (321)
T ss_dssp             --CEEEEEEESSSCSGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEE
T ss_pred             ccccceEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEe
Confidence            45689999998654   4999999999999999999999999999999998872  111112567999999999999999


Q ss_pred             CCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hh
Q 020768           89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PL  167 (321)
Q Consensus        89 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~  167 (321)
                      |++|++|++||+|+..+..                        ...+|+|+||++++++.++++|+++++++||+++ ++
T Consensus        83 G~~v~~~~~GdrV~~~~~~------------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~  138 (321)
T 3tqh_A           83 GSDVNNVNIGDKVMGIAGF------------------------PDHPCCYAEYVCASPDTIIQKLEKLSFLQAASLPTAG  138 (321)
T ss_dssp             CTTCCSCCTTCEEEEECST------------------------TTCCCCSBSEEEECGGGEEECCTTSCHHHHHHSHHHH
T ss_pred             CCCCCCCCCCCEEEEccCC------------------------CCCCCcceEEEEecHHHhccCCCCCCHHHHhhhhhHH
Confidence            9999999999999986421                        1246999999999999999999999999999775 56


Q ss_pred             HHHHHHHHHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHH
Q 020768          168 SVGLHACRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEK  246 (321)
Q Consensus       168 ~~a~~~l~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~  246 (321)
                      .|||++++.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++. ++++.++++++|++.++++.+.+ .+.+.   
T Consensus       139 ~ta~~al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~-~~~~~~~~~~lGa~~~i~~~~~~-~~~~~---  212 (321)
T 3tqh_A          139 LTALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTA-SKRNHAFLKALGAEQCINYHEED-FLLAI---  212 (321)
T ss_dssp             HHHHHHHHHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEE-CHHHHHHHHHHTCSEEEETTTSC-HHHHC---
T ss_pred             HHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEe-ccchHHHHHHcCCCEEEeCCCcc-hhhhh---
Confidence            68999998899999999999985 9999999999999999 677775 56678999999999999875431 13221   


Q ss_pred             HHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEee
Q 020768          247 IQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLF  309 (321)
Q Consensus       247 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~  309 (321)
                           -.++|++|||+|++ .+..++++|+++|+++.+|......  ....+..+++++.|++
T Consensus       213 -----~~g~D~v~d~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~--~~~~~~~~~~~~~~~~  267 (321)
T 3tqh_A          213 -----STPVDAVIDLVGGD-VGIQSIDCLKETGCIVSVPTITAGR--VIEVAKQKHRRAFGLL  267 (321)
T ss_dssp             -----CSCEEEEEESSCHH-HHHHHGGGEEEEEEEEECCSTTHHH--HHHHHHHTTCEEECCC
T ss_pred             -----ccCCCEEEECCCcH-HHHHHHHhccCCCEEEEeCCCCchh--hhhhhhhcceEEEEEe
Confidence                 25799999999975 4599999999999999998654322  2234678899999854

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=1.2e-43  Score=325.10  Aligned_cols=264  Identities=19%  Similarity=0.200  Sum_probs=221.1

Q ss_pred             chhhceeEEEccCCC----eEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeC
Q 020768           14 GEEVNMAAWLLGVNT----LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG   89 (321)
Q Consensus        14 ~~~~~~a~~~~~~~~----l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG   89 (321)
                      |+++||++++.+++.    ++++++|.|+|+++||+|||++++||++|++.+.|.+...  ..+|.++|||++|+|+++|
T Consensus         1 M~~~mka~~~~~~g~p~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~~p~i~G~E~~G~V~~vG   78 (340)
T 3gms_A            1 MSLHGKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHR--IPLPNIPGYEGVGIVENVG   78 (340)
T ss_dssp             -CCEEEEEEESSCSCHHHHEEEEEEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTTT--SCSSBCCCSCCEEEEEEEC
T ss_pred             CCcccEEEEEecCCCchheEEEEecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCCC--CCCCCcCCcceEEEEEEeC
Confidence            456899999987644    8999999999999999999999999999999998865332  4679999999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhH
Q 020768           90 SEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLS  168 (321)
Q Consensus        90 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~  168 (321)
                      ++|++|++||+|+..                            ..+|+|+||+++|++.++++|+++++++||+++ ...
T Consensus        79 ~~v~~~~vGdrV~~~----------------------------~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~l~~~~~  130 (340)
T 3gms_A           79 AFVSRELIGKRVLPL----------------------------RGEGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPL  130 (340)
T ss_dssp             TTSCGGGTTCEEEEC----------------------------SSSCSSBSEEEEEGGGEEECCTTSCHHHHTTSSHHHH
T ss_pred             CCCCCCCCCCEEEec----------------------------CCCccceeEEEcCHHHeEECCCCCCHHHHhhhcchHH
Confidence            999999999999864                            246999999999999999999999999998653 667


Q ss_pred             HHHHHH-HHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHH
Q 020768          169 VGLHAC-RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEK  246 (321)
Q Consensus       169 ~a~~~l-~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~  246 (321)
                      ++|+++ +.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.++++++|++.++++.+  .++.+.+.+
T Consensus       131 ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lga~~~~~~~~--~~~~~~~~~  207 (340)
T 3gms_A          131 TAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRLGAAYVIDTST--APLYETVME  207 (340)
T ss_dssp             HHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEETTT--SCHHHHHHH
T ss_pred             HHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhCCCcEEEeCCc--ccHHHHHHH
Confidence            788887 5689999999999998 6999999999999999 7999999999999999999999988654  566666666


Q ss_pred             HHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhh-ccceEEEEeehhHHH
Q 020768          247 IQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAA-ARYLIYSFLFHFFLI  314 (321)
Q Consensus       247 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~k~~~i~g~~~~~~~  314 (321)
                      +.  .+.++|++|||+|++ .+...+++|+++|+++.+|...+ .+++...+. .+.+++.++....+.
T Consensus       208 ~~--~~~g~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  272 (340)
T 3gms_A          208 LT--NGIGADAAIDSIGGP-DGNELAFSLRPNGHFLTIGLLSG-IQVNWAEIVTKAKVHANIFHLRHWN  272 (340)
T ss_dssp             HT--TTSCEEEEEESSCHH-HHHHHHHTEEEEEEEEECCCTTS-CCCCHHHHHHTSCCEEEECCHHHHH
T ss_pred             Hh--CCCCCcEEEECCCCh-hHHHHHHHhcCCCEEEEEeecCC-CCCCHHHhhhcccceEEEEEehhhh
Confidence            52  356899999999975 45667799999999999997644 245554443 356677666554443

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=6.6e-44  Score=328.91  Aligned_cols=267  Identities=18%  Similarity=0.198  Sum_probs=219.0

Q ss_pred             cccchhhceeEEEccCCC----eEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEE
Q 020768           11 KEDGEEVNMAAWLLGVNT----LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE   86 (321)
Q Consensus        11 ~~~~~~~~~a~~~~~~~~----l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~   86 (321)
                      ...|+.+||++++.+++.    ++++++|.|+|+++||+|||.+++||++|++.+.|.++.  ...+|.++|||++|+|+
T Consensus        20 ~~~m~~~mka~~~~~~g~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~~~P~v~G~E~~G~V~   97 (357)
T 1zsy_A           20 FQSMPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGL--LPELPAVGGNEGVAQVV   97 (357)
T ss_dssp             CCCCCCCEEEEEESSSSCHHHHEEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSSC--CCCSSEECCSCCEEEEE
T ss_pred             hhhCchhhEEEEEecCCCccceEEEeeccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCCC--CCCCCccccceEEEEEE
Confidence            346778899999987765    899999999999999999999999999999999875432  13579999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-
Q 020768           87 KVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-  165 (321)
Q Consensus        87 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-  165 (321)
                      ++|++|++|++||+|++.+.                           .+|+|+||++++++.++++|+++++++||+++ 
T Consensus        98 ~vG~~v~~~~vGdrV~~~~~---------------------------~~G~~aey~~v~~~~~~~iP~~l~~~~Aa~l~~  150 (357)
T 1zsy_A           98 AVGSNVTGLKPGDWVIPANA---------------------------GLGTWRTEAVFSEEALIQVPSDIPLQSAATLGV  150 (357)
T ss_dssp             EECTTCCSCCTTCEEEESSS---------------------------CSCCSBSEEEEEGGGEEEECSSSCHHHHHHTTS
T ss_pred             EeCCCCCCCCCCCEEEEcCC---------------------------CCccceeEEecCHHHcEECCCCCCHHHHhhhcc
Confidence            99999999999999987521                           35999999999999999999999999998775 


Q ss_pred             hhHHHHHHHHH-cCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCCh---hHHHHHHHcCCCeEEecCCCcccH
Q 020768          166 PLSVGLHACRR-ANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD---YRLSVAKELGADNIVKVSTNLQDI  240 (321)
Q Consensus       166 ~~~~a~~~l~~-~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~---~~~~~~~~~g~~~vi~~~~~~~~~  240 (321)
                      ...|||+++.. +++++|++|||+|+ |++|++++|+||.+|+++++++++++   ++.++++++|++.++++++.   .
T Consensus       151 ~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~---~  227 (357)
T 1zsy_A          151 NPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEEL---R  227 (357)
T ss_dssp             HHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHH---H
T ss_pred             cHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcc---h
Confidence            67799999854 79999999999998 99999999999999995445554433   36788999999999875321   0


Q ss_pred             HHHHHHHHHHhC-CCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCC-CCccccchhhhccceEEEEeehhH
Q 020768          241 AEEVEKIQKAMG-TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-LEMTVPLTPAAARYLIYSFLFHFF  312 (321)
Q Consensus       241 ~~~~~~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~k~~~i~g~~~~~  312 (321)
                      .+.+.++.  .+ .++|+||||+|++ ....++++++++|+++.+|... .+..++...++.|++++.|+..+.
T Consensus       228 ~~~~~~~~--~~~~~~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~  298 (357)
T 1zsy_A          228 RPEMKNFF--KDMPQPRLALNCVGGK-SSTELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQ  298 (357)
T ss_dssp             SGGGGGTT--SSSCCCSEEEESSCHH-HHHHHHTTSCTTCEEEECCCCTTCCBCCCHHHHHHSCCEEEECCHHH
T ss_pred             HHHHHHHH--hCCCCceEEEECCCcH-HHHHHHHhhCCCCEEEEEecCCCCCCCCCHHHHHhcCceEEEEEcch
Confidence            11122211  12 2699999999975 4467899999999999998543 356777778889999999997654

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=2.9e-43  Score=320.66  Aligned_cols=257  Identities=29%  Similarity=0.292  Sum_probs=223.5

Q ss_pred             ceeEEEccC---CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768           18 NMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (321)
Q Consensus        18 ~~a~~~~~~---~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~   94 (321)
                      |||+++.++   ..++++|.|.|+|+++||+|||.++++|++|++++.|.++.   ..+|.++|||++|+|+++|++|++
T Consensus         2 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~p~v~G~e~~G~V~~vG~~v~~   78 (325)
T 3jyn_A            2 AKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPA---PFLPSGLGAEGAGVVEAVGDEVTR   78 (325)
T ss_dssp             EEEEEBSSCSSGGGCEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC---SSSSBCCCCCEEEEEEEECTTCCS
T ss_pred             cEEEEEecCCCcceeEEeecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC---CCCCCCCCceeEEEEEEECCCCCC
Confidence            899999854   45999999999999999999999999999999999986532   367999999999999999999999


Q ss_pred             CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHH
Q 020768           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (321)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~  173 (321)
                      |++||+|....                           ..+|+|+||++++++.++++|+++++++||.++ ...++|++
T Consensus        79 ~~~GdrV~~~~---------------------------~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~  131 (325)
T 3jyn_A           79 FKVGDRVAYGT---------------------------GPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYL  131 (325)
T ss_dssp             CCTTCEEEESS---------------------------SSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEec---------------------------CCCccccceEEecHHHeEECCCCCCHHHHhhhhhhHHHHHHH
Confidence            99999998642                           246999999999999999999999999998554 66788888


Q ss_pred             HH-HcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768          174 CR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       174 l~-~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      +. .+++++|++|||+|+ |++|++++|+|+..|+ +|++++++++|.++++++|++.++++.+  .++.+.+.++.  .
T Consensus       132 l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~--~~~~~~~~~~~--~  206 (325)
T 3jyn_A          132 LRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKALGAWETIDYSH--EDVAKRVLELT--D  206 (325)
T ss_dssp             HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEETTT--SCHHHHHHHHT--T
T ss_pred             HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC--ccHHHHHHHHh--C
Confidence            85 479999999999996 9999999999999999 7999999999999999999999988654  56666666652  3


Q ss_pred             CCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC-ccccchhhhcc-ceEEEEeeh
Q 020768          252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE-MTVPLTPAAAR-YLIYSFLFH  310 (321)
Q Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~k-~~~i~g~~~  310 (321)
                      +.++|++|||+|+ ..+..++++|+++|+++.+|...++ .+++...++.| ++++.+...
T Consensus       207 ~~g~Dvvid~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (325)
T 3jyn_A          207 GKKCPVVYDGVGQ-DTWLTSLDSVAPRGLVVSFGNASGPVSGVNLGILAQKDSVYVTRPTL  266 (325)
T ss_dssp             TCCEEEEEESSCG-GGHHHHHTTEEEEEEEEECCCTTCCCCSCCTHHHHHTTSCEEECCCH
T ss_pred             CCCceEEEECCCh-HHHHHHHHHhcCCCEEEEEecCCCCCCCCCHHHHhhcCcEEEEeeee
Confidence            5689999999997 6889999999999999999977654 36888888877 678876554

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=1.8e-43  Score=325.04  Aligned_cols=257  Identities=22%  Similarity=0.285  Sum_probs=212.9

Q ss_pred             hhceeEEEccCC---CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCC
Q 020768           16 EVNMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (321)
Q Consensus        16 ~~~~a~~~~~~~---~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v   92 (321)
                      ++|||+++.+++   .+++++.|.|+|+++||+|||.++++|++|++.+.|.+...  ..+|+++|||++|+|+++|++|
T Consensus         2 m~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~~p~v~G~e~~G~V~~vG~~v   79 (349)
T 4a27_A            2 MEMRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNP--PKTPLVPGFECSGIVEALGDSV   79 (349)
T ss_dssp             CCEEEEEECSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSC--CCSSBCCCSEEEEEEEEECTTC
T ss_pred             ceeEEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcCCC--CCCCccccceeEEEEEEeCCCC
Confidence            579999998764   69999999999999999999999999999999999865322  5679999999999999999999


Q ss_pred             CCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHH
Q 020768           93 KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGL  171 (321)
Q Consensus        93 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~  171 (321)
                      ++|++||+|+...                            .+|+|+||++++++.++++|+++++++||.++ ++.+||
T Consensus        80 ~~~~~GdrV~~~~----------------------------~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~  131 (349)
T 4a27_A           80 KGYEIGDRVMAFV----------------------------NYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAY  131 (349)
T ss_dssp             CSCCTTCEEEEEC----------------------------SSCCSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHH
T ss_pred             CCCCCCCEEEEec----------------------------CCCcceEEEEecHHHeEECCCCCCHHHHHHHHHHHHHHH
Confidence            9999999998752                            46999999999999999999999999999775 788999


Q ss_pred             HHH-HHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHH
Q 020768          172 HAC-RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       172 ~~l-~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      +++ +.+++++|++|||+|+ |++|++++|+|+.+|..+|++++ ++++.++++ +|++.+++ .  ..++.+.++++  
T Consensus       132 ~~l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~ga~~~~~-~--~~~~~~~~~~~--  204 (349)
T 4a27_A          132 VMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-DSVTHLFD-R--NADYVQEVKRI--  204 (349)
T ss_dssp             HHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-GGSSEEEE-T--TSCHHHHHHHH--
T ss_pred             HHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-cCCcEEEc-C--CccHHHHHHHh--
Confidence            998 5589999999999999 99999999999999765788776 667888888 99999987 2  35677766664  


Q ss_pred             HhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC-----------------ccccchhhhccceEEEEeehh
Q 020768          250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE-----------------MTVPLTPAAARYLIYSFLFHF  311 (321)
Q Consensus       250 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----------------~~~~~~~~~~k~~~i~g~~~~  311 (321)
                       .+.++|++|||+|++ .++.++++|+++|+++.+|.....                 .+++...++.|++++.|+...
T Consensus       205 -~~~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~~  281 (349)
T 4a27_A          205 -SAEGVDIVLDCLCGD-NTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLL  281 (349)
T ss_dssp             -CTTCEEEEEEECC--------CTTEEEEEEEEEEC-------------------------CHHHHHHHTCEEEEECHH
T ss_pred             -cCCCceEEEECCCch-hHHHHHHHhhcCCEEEEECCCcccccccccccccccccccccccCHHHHhhcCceEEEEeeh
Confidence             367899999999985 568999999999999999965321                 235666788899999998764

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=1.3e-42  Score=320.73  Aligned_cols=262  Identities=21%  Similarity=0.260  Sum_probs=221.9

Q ss_pred             ccccchhhceeEEEccCC-----CeEE-EEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeE
Q 020768           10 EKEDGEEVNMAAWLLGVN-----TLKI-QPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAG   83 (321)
Q Consensus        10 ~~~~~~~~~~a~~~~~~~-----~l~~-~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG   83 (321)
                      ++..++.+||++++.+++     .+++ +++|.|+|+++||||||.+++||++|++++.|.+..  ...+|+++|||++|
T Consensus        16 ~~~~~~~~MkA~~~~~~g~~~~~~l~~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~~~P~i~G~E~~G   93 (362)
T 2c0c_A           16 ENLYFQSMMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDP--SVKPPFDIGFEGIG   93 (362)
T ss_dssp             HHHHHCCEEEEEEECSCCSSHHHHEEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTCT--TCCSCEECCSEEEE
T ss_pred             ccccchhhceEEEEeecCCCccceeEEEeecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCCC--CCCCCCCCCceeEE
Confidence            445677789999998753     4889 999999999999999999999999999999885432  14579999999999


Q ss_pred             EEEEeCCCCC-CCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhc
Q 020768           84 VIEKVGSEVK-TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA  162 (321)
Q Consensus        84 ~V~~vG~~v~-~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa  162 (321)
                      +|+++|++|+ +|++||+|++.                             .+|+|+||++++++.++++|+. +.+.|+
T Consensus        94 ~V~~vG~~V~~~~~vGdrV~~~-----------------------------~~G~~aey~~v~~~~~~~~P~~-~~~aaa  143 (362)
T 2c0c_A           94 EVVALGLSASARYTVGQAVAYM-----------------------------APGSFAEYTVVPASIATPVPSV-KPEYLT  143 (362)
T ss_dssp             EEEEECTTGGGTCCTTCEEEEE-----------------------------CSCCSBSEEEEEGGGCEECSSS-CHHHHT
T ss_pred             EEEEECCCccCCCCCCCEEEEc-----------------------------cCCcceeEEEEcHHHeEECCCC-chHhhc
Confidence            9999999999 99999999875                             2599999999999999999996 455555


Q ss_pred             cchhhHHHHHHHH-HcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccH
Q 020768          163 MCEPLSVGLHACR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI  240 (321)
Q Consensus       163 ~~~~~~~a~~~l~-~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~  240 (321)
                      +..++.+||+++. .+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.++++++|++.++++++  .++
T Consensus       144 l~~~~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~--~~~  220 (362)
T 2c0c_A          144 LLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKSLGCDRPINYKT--EPV  220 (362)
T ss_dssp             TTTHHHHHHHHHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTT--SCH
T ss_pred             ccchHHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHcCCcEEEecCC--hhH
Confidence            6668899999985 578999999999996 9999999999999999 7999999999999999999999988654  455


Q ss_pred             HHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCc-----------cccchhhhccceEEEEee
Q 020768          241 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEM-----------TVPLTPAAARYLIYSFLF  309 (321)
Q Consensus       241 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-----------~~~~~~~~~k~~~i~g~~  309 (321)
                      .+.+++.   .+.++|++|||+|+ ..++.++++++++|+++.+|......           .++ ..++.|++++.|++
T Consensus       221 ~~~~~~~---~~~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~g~~  295 (362)
T 2c0c_A          221 GTVLKQE---YPEGVDVVYESVGG-AMFDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLP-AKLLKKSASVQGFF  295 (362)
T ss_dssp             HHHHHHH---CTTCEEEEEECSCT-HHHHHHHHHEEEEEEEEECCCGGGTTSSSCCCCCCCTTHH-HHHHHHTCEEEECC
T ss_pred             HHHHHHh---cCCCCCEEEECCCH-HHHHHHHHHHhcCCEEEEEeCCCCcCcccccccccccccH-HHHHhhcceEEEEE
Confidence            5555543   35689999999997 68899999999999999999654311           222 45788999999987


Q ss_pred             hh
Q 020768          310 HF  311 (321)
Q Consensus       310 ~~  311 (321)
                      .+
T Consensus       296 ~~  297 (362)
T 2c0c_A          296 LN  297 (362)
T ss_dssp             GG
T ss_pred             hh
Confidence            54

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=6.6e-43  Score=318.07  Aligned_cols=257  Identities=19%  Similarity=0.183  Sum_probs=217.0

Q ss_pred             ceeEEEccCC---CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768           18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (321)
Q Consensus        18 ~~a~~~~~~~---~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~   94 (321)
                      |||+++.+++   .++++++|.|+|+++||||||.++++|++|++.+.|.++.  ...+|.++|||++|+|+++|  +++
T Consensus         1 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~v~G~E~~G~V~~~G--v~~   76 (324)
T 3nx4_A            1 MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKI--IRHFPMIPGIDFAGTVHASE--DPR   76 (324)
T ss_dssp             CEEEEEEESSSSEEEEEEECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTTC--CCSSSBCCCSEEEEEEEEES--STT
T ss_pred             CceEEEecCCCCceeeEeecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCCC--CCCCCccccceeEEEEEEeC--CCC
Confidence            8999998665   4899999999999999999999999999999999986532  25679999999999999998  688


Q ss_pred             CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHH
Q 020768           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (321)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~  173 (321)
                      |++||+|++.+.         .             .+...+|+|+||++++++.++++|+++++++||+++ .+.|||++
T Consensus        77 ~~vGdrV~~~~~---------~-------------~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a  134 (324)
T 3nx4_A           77 FHAGQEVLLTGW---------G-------------VGENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLC  134 (324)
T ss_dssp             CCTTCEEEEECT---------T-------------BTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEccc---------c-------------cCCCCCCceeeEEecCHHHcEECCCCCCHHHHHHhhhHHHHHHHH
Confidence            999999997631         0             012357999999999999999999999999999776 56778877


Q ss_pred             H---HHcCCCCCC-EEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHH
Q 020768          174 C---RRANIGPET-NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQ  248 (321)
Q Consensus       174 l---~~~~~~~g~-~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~  248 (321)
                      +   .+.++++++ +|||+|+ |++|++++|+|+++|+ +|++++++++|.++++++|+++++++++...     +++  
T Consensus       135 l~~~~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~-----~~~--  206 (324)
T 3nx4_A          135 VMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSLGANRILSRDEFAE-----SRP--  206 (324)
T ss_dssp             HHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTCSEEEEGGGSSC-----CCS--
T ss_pred             HHHhhhcccCCCCCeEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEecCCHHH-----HHh--
Confidence            6   456677743 4999998 9999999999999999 6999999999999999999999998754321     211  


Q ss_pred             HHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC-ccccchhhhccceEEEEeeh
Q 020768          249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE-MTVPLTPAAARYLIYSFLFH  310 (321)
Q Consensus       249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~k~~~i~g~~~  310 (321)
                       ..+.++|++|||+|+ ..++.++++|+++|+++.+|..... .+++...++.|++++.|+..
T Consensus       207 -~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~g~~~  267 (324)
T 3nx4_A          207 -LEKQLWAGAIDTVGD-KVLAKVLAQMNYGGCVAACGLAGGFALPTTVMPFILRNVRLQGVDS  267 (324)
T ss_dssp             -SCCCCEEEEEESSCH-HHHHHHHHTEEEEEEEEECCCTTCSEEEEESHHHHHHCCEEEECCS
T ss_pred             -hcCCCccEEEECCCc-HHHHHHHHHHhcCCEEEEEecCCCCCCCCCHHHHhhcCeEEEEEec
Confidence             234689999999997 4899999999999999999977553 57788889999999999864

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=4.7e-42  Score=313.66  Aligned_cols=260  Identities=26%  Similarity=0.328  Sum_probs=219.4

Q ss_pred             ceeEEEccC---CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768           18 NMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (321)
Q Consensus        18 ~~a~~~~~~---~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~   94 (321)
                      ||++++.++   +.++++++|.|+|+++||||||.++++|++|++++.|.+.......+|.++|||++|+|+++|++|++
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~   81 (333)
T 1wly_A            2 VMAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTD   81 (333)
T ss_dssp             CEEEEESSCSSGGGEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTCCS
T ss_pred             cEEEEEcccCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCCCC
Confidence            899998854   36999999999999999999999999999999998875411100346899999999999999999999


Q ss_pred             CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhh--hccc-hhhHHHH
Q 020768           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEE--GAMC-EPLSVGL  171 (321)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~--aa~~-~~~~~a~  171 (321)
                      |++||+|...+.                           .+|+|+||++++++.++++|+++++++  ||.+ .+++|||
T Consensus        82 ~~~GdrV~~~~~---------------------------~~G~~aey~~v~~~~~~~iP~~~~~~~~~aa~l~~~~~ta~  134 (333)
T 1wly_A           82 FTVGERVCTCLP---------------------------PLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQ  134 (333)
T ss_dssp             CCTTCEEEECSS---------------------------SCCCSBSEEEEEGGGCEECCTTCCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEecC---------------------------CCCcceeEEEecHHHcEeCCCCCChHHhCccchhhhHHHHH
Confidence            999999976421                           259999999999999999999999999  6654 5889999


Q ss_pred             HHHH-HcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHH
Q 020768          172 HACR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       172 ~~l~-~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      +++. .+++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++++|++.++++.+  .++.+.+.+.. 
T Consensus       135 ~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~g~~~~~d~~~--~~~~~~i~~~~-  210 (333)
T 1wly_A          135 YLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKLGCHHTINYST--QDFAEVVREIT-  210 (333)
T ss_dssp             HHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTT--SCHHHHHHHHH-
T ss_pred             HHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEECCC--HHHHHHHHHHh-
Confidence            9996 689999999999997 9999999999999999 7999999999999999999998887653  45666665543 


Q ss_pred             HhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-Cccccch-hhhccc--eEEEEeeh
Q 020768          250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLT-PAAARY--LIYSFLFH  310 (321)
Q Consensus       250 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~-~~~~k~--~~i~g~~~  310 (321)
                       .+.++|++|||+|+ ..++.++++++++|+++.+|...+ ..+++.. .++.|+  +++.|++.
T Consensus       211 -~~~~~d~vi~~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g~~~  273 (333)
T 1wly_A          211 -GGKGVDVVYDSIGK-DTLQKSLDCLRPRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALW  273 (333)
T ss_dssp             -TTCCEEEEEECSCT-TTHHHHHHTEEEEEEEEECCCTTCCCCCCCHHHHTTTTTSCEEECCCGG
T ss_pred             -CCCCCeEEEECCcH-HHHHHHHHhhccCCEEEEEecCCCCcCCCChhHhhhhcCCcEEEEEeeh
Confidence             35689999999998 788999999999999999997654 3567777 788899  99999854

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.3e-41  Score=309.94  Aligned_cols=257  Identities=24%  Similarity=0.255  Sum_probs=220.4

Q ss_pred             ceeEEEccC---CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768           18 NMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (321)
Q Consensus        18 ~~a~~~~~~---~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~   94 (321)
                      ||++++.++   ..++++++|.|+|+++||+|||.++++|++|++.+.|.++   ...+|.++|||++|+|+++|++|++
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~~p~v~G~E~~G~V~~vG~~v~~   78 (327)
T 1qor_A            2 ATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYP---PPSLPSGLGTEAAGIVSKVGSGVKH   78 (327)
T ss_dssp             CEEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSC---CSSSSBCCCSCEEEEEEEECTTCCS
T ss_pred             cEEEEEcCCCChhheEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCC---CCCCCCCCCceeEEEEEEECCCCCC
Confidence            899998754   4689999999999999999999999999999999987542   1357999999999999999999999


Q ss_pred             CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHHH
Q 020768           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHA  173 (321)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~~  173 (321)
                      |++||+| ..+    +                      ..+|+|+||++++++.++++|+++++++||.+ .+++|||++
T Consensus        79 ~~~GdrV-~~~----g----------------------~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a  131 (327)
T 1qor_A           79 IKAGDRV-VYA----Q----------------------SALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYL  131 (327)
T ss_dssp             CCTTCEE-EES----C----------------------CSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCEE-EEC----C----------------------CCCceeeeEEEecHHHcEECCCCCCHHHHHHhhhHHHHHHHH
Confidence            9999999 331    0                      13599999999999999999999999998754 588999999


Q ss_pred             HH-HcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768          174 CR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       174 l~-~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      +. .+++++|++|||+|+ |++|++++|+++..|+ .|+++++++++.+.++++|++.++++.+  .++.+.+.+..  .
T Consensus       132 l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~--~  206 (327)
T 1qor_A          132 LRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVINYRE--EDLVERLKEIT--G  206 (327)
T ss_dssp             HHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEETTT--SCHHHHHHHHT--T
T ss_pred             HHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEECCC--ccHHHHHHHHh--C
Confidence            96 689999999999996 9999999999999999 7999999999999999999998887653  45555555442  2


Q ss_pred             CCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC-ccccchhhhcc-ceEEEEeeh
Q 020768          252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE-MTVPLTPAAAR-YLIYSFLFH  310 (321)
Q Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~k-~~~i~g~~~  310 (321)
                      +.++|++||++| ...++.++++|+++|+++.+|...+. .+++...++.| ++++.+...
T Consensus       207 ~~~~D~vi~~~g-~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (327)
T 1qor_A          207 GKKVRVVYDSVG-RDTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSL  266 (327)
T ss_dssp             TCCEEEEEECSC-GGGHHHHHHTEEEEEEEEECCCTTCCCCCBCTHHHHHTTSCEEECCCH
T ss_pred             CCCceEEEECCc-hHHHHHHHHHhcCCCEEEEEecCCCCCCccCHHHHhhccceEEEccch
Confidence            457999999999 57899999999999999999976543 46788888888 899987643

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=7.9e-42  Score=311.50  Aligned_cols=260  Identities=20%  Similarity=0.173  Sum_probs=213.6

Q ss_pred             hhceeEEEccCC---CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCC
Q 020768           16 EVNMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (321)
Q Consensus        16 ~~~~a~~~~~~~---~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v   92 (321)
                      .+||++++.+++   .++++|+|.|+|+++||+|||.++++|++|++.+.|..+.  ...+|.++|||++|+|++.  ++
T Consensus         2 ~~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~v~G~E~~G~V~~~--~v   77 (328)
T 1xa0_A            2 SAFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKI--VKTYPFVPGIDLAGVVVSS--QH   77 (328)
T ss_dssp             CEEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSS--CCSSSBCCCSEEEEEEEEC--CS
T ss_pred             CcceEEEEecCCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCCC--CCCCCcccCcceEEEEEec--CC
Confidence            469999998765   7899999999999999999999999999999998875421  1357999999999999995  57


Q ss_pred             CCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHH
Q 020768           93 KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGL  171 (321)
Q Consensus        93 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~  171 (321)
                      ++|++||+|++.+.                     .. +...+|+|+||++++++.++++|+++++++||+++ ...++|
T Consensus        78 ~~~~vGdrV~~~~~---------------------~~-g~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~  135 (328)
T 1xa0_A           78 PRFREGDEVIATGY---------------------EI-GVTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAA  135 (328)
T ss_dssp             SSCCTTCEEEEEST---------------------TB-TTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEccc---------------------cC-CCCCCccceeEEEechHHeEECCCCCCHHHhhhhhhhHHHHH
Confidence            88999999987521                     00 11346999999999999999999999999999776 455677


Q ss_pred             HHH---HHcCCCCCC-EEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHH
Q 020768          172 HAC---RRANIGPET-NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEK  246 (321)
Q Consensus       172 ~~l---~~~~~~~g~-~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~  246 (321)
                      .++   +++++++|+ +|||+|+ |++|++++|+|+++|+ +|++++++++|.++++++|++.++++.+.  + .+.+++
T Consensus       136 ~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lGa~~~i~~~~~--~-~~~~~~  211 (328)
T 1xa0_A          136 LSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGAKEVLAREDV--M-AERIRP  211 (328)
T ss_dssp             HHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTCSEEEECC------------
T ss_pred             HHHHHHhhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCcEEEecCCc--H-HHHHHH
Confidence            665   457899997 9999998 9999999999999999 58889999999999999999999886532  1 222222


Q ss_pred             HHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-CccccchhhhccceEEEEee
Q 020768          247 IQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARYLIYSFLF  309 (321)
Q Consensus       247 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~  309 (321)
                         ..+.++|++|||+|+ ..++.++++++++|+++.+|...+ ..++++..++.|++++.|+.
T Consensus       212 ---~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~  271 (328)
T 1xa0_A          212 ---LDKQRWAAAVDPVGG-RTLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGID  271 (328)
T ss_dssp             ---CCSCCEEEEEECSTT-TTHHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEECC
T ss_pred             ---hcCCcccEEEECCcH-HHHHHHHHhhccCCEEEEEeecCCCCCCCchhhhhhcCceEEEEe
Confidence               224589999999998 588999999999999999997654 45677778889999999973

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=2.5e-42  Score=320.70  Aligned_cols=263  Identities=19%  Similarity=0.203  Sum_probs=218.9

Q ss_pred             hhhceeEEEc-cCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhcccc-------C----C--------------
Q 020768           15 EEVNMAAWLL-GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRC-------A----D--------------   68 (321)
Q Consensus        15 ~~~~~a~~~~-~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~-------~----~--------------   68 (321)
                      .++||+++.. ++..++++|+|.|+|+++||||||.++++|++|++++.|.+.       +    +              
T Consensus         5 ~~~mka~v~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~~~~   84 (379)
T 3iup_A            5 ALQLRSRIKSSGELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAMRSM   84 (379)
T ss_dssp             EEEEEEEECTTSEEEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHHHHH
T ss_pred             hhhHHHHHhcCCCCceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCcccccccc
Confidence            4568998885 446799999999999999999999999999999999987421       0    0              


Q ss_pred             -cCCCCCcccccceeEEEEEeCCCC-CCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecC
Q 020768           69 -FVVKEPMVIGHECAGVIEKVGSEV-KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA  146 (321)
Q Consensus        69 -~~~~~p~~~G~e~vG~V~~vG~~v-~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~  146 (321)
                       ....+|.++|||++|+|+++|++| ++|++||+|++.                             .+|+|+||+++++
T Consensus        85 ~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~-----------------------------~~G~~aey~~v~~  135 (379)
T 3iup_A           85 AGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAI-----------------------------GGAMYSQYRCIPA  135 (379)
T ss_dssp             GGGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEEC-----------------------------CSCCSBSEEEEEG
T ss_pred             ccccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEec-----------------------------CCCcceeEEEeCH
Confidence             013578999999999999999999 899999999875                             3599999999999


Q ss_pred             CcEEECCCCCChhhhccch-hhHHHHHHHHHcCCCCCCEEEEEc--CChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH
Q 020768          147 DLCFKLPDNVSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMG--AGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK  223 (321)
Q Consensus       147 ~~~~~ip~~~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~vlI~G--ag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~  223 (321)
                      ++++++|+++++++||.+. ...+||++++... ++|++|||+|  +|++|++++|+|+++|+ +|++++++++|.++++
T Consensus       136 ~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~-~~g~~vlV~gag~G~vG~~a~q~a~~~Ga-~Vi~~~~~~~~~~~~~  213 (379)
T 3iup_A          136 DQCLVLPEGATPADGASSFVNPLTALGMVETMR-LEGHSALVHTAAASNLGQMLNQICLKDGI-KLVNIVRKQEQADLLK  213 (379)
T ss_dssp             GGEEECCTTCCHHHHTTSSHHHHHHHHHHHHHH-HTTCSCEEESSTTSHHHHHHHHHHHHHTC-CEEEEESSHHHHHHHH
T ss_pred             HHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhc-cCCCEEEEECCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHH
Confidence            9999999999999998554 5667888887666 8999999994  49999999999999999 6889999999999999


Q ss_pred             HcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcc-----cC-----------CEEEEEcCC
Q 020768          224 ELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATR-----AG-----------GKVCLVGMG  287 (321)
Q Consensus       224 ~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~-----~~-----------G~~v~~g~~  287 (321)
                      ++|+++++++.+  .++.+.++++..  +.++|++|||+|++..++.++++++     ++           |+++.+|..
T Consensus       214 ~lGa~~~~~~~~--~~~~~~v~~~t~--~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv~~G~~  289 (379)
T 3iup_A          214 AQGAVHVCNAAS--PTFMQDLTEALV--STGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGL  289 (379)
T ss_dssp             HTTCSCEEETTS--TTHHHHHHHHHH--HHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEEECCCS
T ss_pred             hCCCcEEEeCCC--hHHHHHHHHHhc--CCCceEEEECCCchhhHHHHHHhcchhhhccccceeecccccCceEEEecCC
Confidence            999999998654  577777777643  4689999999998778888888886     33           666666654


Q ss_pred             CCCccccchhhhccceEEEEeehhHH
Q 020768          288 HLEMTVPLTPAAARYLIYSFLFHFFL  313 (321)
Q Consensus       288 ~~~~~~~~~~~~~k~~~i~g~~~~~~  313 (321)
                      . ..++++..++.|++++.|++...+
T Consensus       290 ~-~~~~~~~~~~~~~~~i~g~~~~~~  314 (379)
T 3iup_A          290 D-TSPTEFNRNFGMAWGMGGWLLFPF  314 (379)
T ss_dssp             E-EEEEEECCCSCSCEEEEECCHHHH
T ss_pred             C-CCccccccccccceEEEEEEeeee
Confidence            3 234556677889999999887554

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=1.5e-41  Score=309.87  Aligned_cols=262  Identities=20%  Similarity=0.215  Sum_probs=215.7

Q ss_pred             chhhceeEEEccCC---CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCC
Q 020768           14 GEEVNMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGS   90 (321)
Q Consensus        14 ~~~~~~a~~~~~~~---~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~   90 (321)
                      ||.+||++++.+++   .++++|+|.|+|+++||+|||.++++|++|++.+.|....  ...+|.++|||++|+|+++  
T Consensus         1 m~~~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~i~G~E~~G~V~~~--   76 (330)
T 1tt7_A            1 MSTLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNI--VREYPLILGIDAAGTVVSS--   76 (330)
T ss_dssp             -CCEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTT--CSSCSEECCSEEEEEEEEC--
T ss_pred             CCCcceEEEEecCCCCcceeEeecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCCC--cCCCCccccceEEEEEEEc--
Confidence            56789999998654   7999999999999999999999999999999998875321  1357999999999999996  


Q ss_pred             CCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHH
Q 020768           91 EVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSV  169 (321)
Q Consensus        91 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~  169 (321)
                      ++++|++||+|++.+..                     . +...+|+|+||++++++.++++|+++++++||+++ ...+
T Consensus        77 ~v~~~~vGdrV~~~~~~---------------------~-g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~t  134 (330)
T 1tt7_A           77 NDPRFAEGDEVIATSYE---------------------L-GVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFT  134 (330)
T ss_dssp             SSTTCCTTCEEEEESTT---------------------B-TTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEcccc---------------------c-CCCCCccceeEEEecHHHeEECCCCCCHHHHhhccchHHH
Confidence            56889999999875310                     0 11356999999999999999999999999999776 4556


Q ss_pred             HHHHH---HHcCCCCCC-EEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHH
Q 020768          170 GLHAC---RRANIGPET-NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEV  244 (321)
Q Consensus       170 a~~~l---~~~~~~~g~-~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~  244 (321)
                      +|.++   ++.++++|+ +|||+|+ |++|++++|+|+.+|+ .|++++++++|+++++++|++.++++++..   .+.+
T Consensus       135 a~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~---~~~~  210 (330)
T 1tt7_A          135 AALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGASEVISREDVY---DGTL  210 (330)
T ss_dssp             HHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTCSEEEEHHHHC---SSCC
T ss_pred             HHHHHHHHHhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEEECCCch---HHHH
Confidence            77665   457899997 9999998 9999999999999999 588888999999999999999988753210   0011


Q ss_pred             HHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-CccccchhhhccceEEEEee
Q 020768          245 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARYLIYSFLF  309 (321)
Q Consensus       245 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~  309 (321)
                      ++   ..+.++|++|||+|+ ..++.++++++++|+++.+|...+ ..++++..++.|++++.|+.
T Consensus       211 ~~---~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~  272 (330)
T 1tt7_A          211 KA---LSKQQWQGAVDPVGG-KQLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGID  272 (330)
T ss_dssp             CS---SCCCCEEEEEESCCT-HHHHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECC
T ss_pred             HH---hhcCCccEEEECCcH-HHHHHHHHhhcCCCEEEEEecCCCCccCcchHHHHhcCeEEEEEe
Confidence            11   124579999999998 689999999999999999997654 45677778899999999983

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=7.5e-41  Score=306.00  Aligned_cols=254  Identities=19%  Similarity=0.171  Sum_probs=217.3

Q ss_pred             hhceeEEEc-------cCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccc----eeEE
Q 020768           16 EVNMAAWLL-------GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE----CAGV   84 (321)
Q Consensus        16 ~~~~a~~~~-------~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e----~vG~   84 (321)
                      ++||++++.       +++.++++++|.|+|+++||||||.+++||++|...+.+...    ..+|.++|||    ++|+
T Consensus         6 ~~mka~v~~~~~~g~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~~----~~~p~~~G~e~g~~~~G~   81 (336)
T 4b7c_A            6 QINRQYQLAQRPSGLPGRDTFSFVETPLGEPAEGQILVKNEYLSLDPAMRGWMNDARS----YIPPVGIGEVMRALGVGK   81 (336)
T ss_dssp             CEEEEEEECSCCSSSCCTTSEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHHSCSCC----SSCCCCTTSBCCCEEEEE
T ss_pred             ccccEEEEEecCCCCCCCCceEEEeccCCCCCCCEEEEEEEEEEeCHHHHhhhhcccc----cCCCCCCCcccCCceEEE
Confidence            458999886       367899999999999999999999999999999988775321    3457777777    8999


Q ss_pred             EEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhh--c
Q 020768           85 IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEG--A  162 (321)
Q Consensus        85 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~a--a  162 (321)
                      |++  .++++|++||+|++.                               |+|+||++++++.++++|+++++.++  |
T Consensus        82 V~~--~~v~~~~vGdrV~~~-------------------------------G~~aey~~v~~~~~~~~P~~~~~~~~a~a  128 (336)
T 4b7c_A           82 VLV--SKHPGFQAGDYVNGA-------------------------------LGVQDYFIGEPKGFYKVDPSRAPLPRYLS  128 (336)
T ss_dssp             EEE--ECSTTCCTTCEEEEE-------------------------------CCSBSEEEECCTTCEEECTTTSCGGGGGT
T ss_pred             EEe--cCCCCCCCCCEEecc-------------------------------CCceEEEEechHHeEEcCCCCCchHHHhh
Confidence            999  458999999999864                               89999999999999999999976664  3


Q ss_pred             -cchhhHHHHHHH-HHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCeEEecCCCcc
Q 020768          163 -MCEPLSVGLHAC-RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVSTNLQ  238 (321)
Q Consensus       163 -~~~~~~~a~~~l-~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~vi~~~~~~~  238 (321)
                       +..++.|||+++ +.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.+.+ +++|++.++++.+  .
T Consensus       129 ~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~--~  205 (336)
T 4b7c_A          129 ALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFLVEELGFDGAIDYKN--E  205 (336)
T ss_dssp             TTSHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCCSEEEETTT--S
T ss_pred             hcccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCCEEEECCC--H
Confidence             446889999999 6789999999999999 9999999999999999 799999999999999 8999999988654  5


Q ss_pred             cHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-------CccccchhhhccceEEEEeehh
Q 020768          239 DIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-------EMTVPLTPAAARYLIYSFLFHF  311 (321)
Q Consensus       239 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-------~~~~~~~~~~~k~~~i~g~~~~  311 (321)
                      ++.+.+.++   .++++|++|||+|+ ..++.++++++++|+++.+|....       ..++++..++.|++++.|+..+
T Consensus       206 ~~~~~~~~~---~~~~~d~vi~~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~  281 (336)
T 4b7c_A          206 DLAAGLKRE---CPKGIDVFFDNVGG-EILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVM  281 (336)
T ss_dssp             CHHHHHHHH---CTTCEEEEEESSCH-HHHHHHHTTEEEEEEEEECCCGGGGC------CCTTTTHHHHTTCEEEECCGG
T ss_pred             HHHHHHHHh---cCCCceEEEECCCc-chHHHHHHHHhhCCEEEEEeecccccCCcccccchhHHHHHhCCcEEEEEEhh
Confidence            666666654   25689999999996 689999999999999999996542       1366777889999999999876


Q ss_pred             HH
Q 020768          312 FL  313 (321)
Q Consensus       312 ~~  313 (321)
                      .+
T Consensus       282 ~~  283 (336)
T 4b7c_A          282 DY  283 (336)
T ss_dssp             GG
T ss_pred             hh
Confidence            53

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=1.8e-40  Score=307.84  Aligned_cols=243  Identities=21%  Similarity=0.277  Sum_probs=203.9

Q ss_pred             ccchhhceeEEEccC---CCeEE-EEecCCCC-CCCcEEEEEeEeecccccHhhhhccccC------------CcCCCCC
Q 020768           12 EDGEEVNMAAWLLGV---NTLKI-QPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCA------------DFVVKEP   74 (321)
Q Consensus        12 ~~~~~~~~a~~~~~~---~~l~~-~e~~~p~~-~~~evlVkv~a~~l~~~D~~~~~g~~~~------------~~~~~~p   74 (321)
                      .+++.+||++++.++   ..+++ +++|.|.| +++||||||.+++||++|++++.|....            .....+|
T Consensus        16 ~~~~~~mka~~~~~~g~~~~l~~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~P   95 (375)
T 2vn8_A           16 ENLYFQSMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFP   95 (375)
T ss_dssp             --CCCCEEEEEBSSCCSGGGCEEEEEECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTCS
T ss_pred             cccCccceeEEeccCCCccceEEeccccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccCC
Confidence            456677999999865   36899 99999995 9999999999999999999998874210            1112379


Q ss_pred             cccccceeEEEEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCC
Q 020768           75 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD  154 (321)
Q Consensus        75 ~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~  154 (321)
                      .++|||++|+|+++|++|++|++||+|++.+.                         ...+|+|+||++++++.++++|+
T Consensus        96 ~v~G~E~~G~V~~vG~~V~~~~vGDrV~~~~~-------------------------~~~~G~~aey~~v~~~~~~~iP~  150 (375)
T 2vn8_A           96 LTLGRDVSGVVMECGLDVKYFKPGDEVWAAVP-------------------------PWKQGTLSEFVVVSGNEVSHKPK  150 (375)
T ss_dssp             BCCCCEEEEEEEEECTTCCSCCTTCEEEEECC-------------------------TTSCCSSBSEEEEEGGGEEECCT
T ss_pred             cccceeeeEEEEEeCCCCCCCCCCCEEEEecC-------------------------CCCCccceeEEEEcHHHeeeCCC
Confidence            99999999999999999999999999987631                         12469999999999999999999


Q ss_pred             CCChhhhccch-hhHHHHHHHH-HcC----CCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCC
Q 020768          155 NVSLEEGAMCE-PLSVGLHACR-RAN----IGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA  227 (321)
Q Consensus       155 ~~~~~~aa~~~-~~~~a~~~l~-~~~----~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~  227 (321)
                      ++++++||+++ ++.|||+++. .++    +++|++|||+|+ |++|++++|+|+..|+ +|++++ ++++.++++++|+
T Consensus       151 ~ls~~~Aa~l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga-~Vi~~~-~~~~~~~~~~lGa  228 (375)
T 2vn8_A          151 SLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDA-HVTAVC-SQDASELVRKLGA  228 (375)
T ss_dssp             TSCHHHHTTSHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHHTTC
T ss_pred             CCCHHHHhhhHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEe-ChHHHHHHHHcCC
Confidence            99999999876 5779999994 578    899999999996 9999999999999999 678777 6788999999999


Q ss_pred             CeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCH-HHHHHHHHHcccCCEEEEEcCCC
Q 020768          228 DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFN-KTMSTALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       228 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~~~  288 (321)
                      +.++++.+  .++.+.+.+     ..++|++|||+|++ ..++.++++++++|+++.+|...
T Consensus       229 ~~v~~~~~--~~~~~~~~~-----~~g~D~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~  283 (375)
T 2vn8_A          229 DDVIDYKS--GSVEEQLKS-----LKPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPF  283 (375)
T ss_dssp             SEEEETTS--SCHHHHHHT-----SCCBSEEEESSCTTHHHHGGGGBCSSSCCEEEESCCSH
T ss_pred             CEEEECCc--hHHHHHHhh-----cCCCCEEEECCCChhhhhHHHHHhhcCCcEEEEeCCCc
Confidence            99998754  355544432     35899999999986 56688899999999999999653

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=2.9e-40  Score=304.59  Aligned_cols=261  Identities=19%  Similarity=0.174  Sum_probs=216.4

Q ss_pred             cchhhceeEEE-ccC--------CCeEEEEecCCCC-CCCcEEEEEeEeecccccHhhhhccc--cCCcCCCCCcccccc
Q 020768           13 DGEEVNMAAWL-LGV--------NTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLR--CADFVVKEPMVIGHE   80 (321)
Q Consensus        13 ~~~~~~~a~~~-~~~--------~~l~~~e~~~p~~-~~~evlVkv~a~~l~~~D~~~~~g~~--~~~~~~~~p~~~G~e   80 (321)
                      ++|++||++++ ..+        +.++++|+|.|+| +++||||||.++++|++|++.+.+..  .......+|.++|||
T Consensus         4 ~~~~~mka~v~~~~~~~~g~p~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~v~G~E   83 (357)
T 2zb4_A            4 AAAMIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGG   83 (357)
T ss_dssp             --CCEEEEEEECCCCCTTSCCCGGGEEEEEEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTSBCEEE
T ss_pred             cccccceEEEEeccCCCCCCCCcCceEEEeecCCCCCCCCeEEEEEEEEecCHHHHhhccccccccccCCCCCCcccccc
Confidence            46778999999 443        5699999999999 99999999999999999988776521  011124568999999


Q ss_pred             eeEEEEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCC----
Q 020768           81 CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNV----  156 (321)
Q Consensus        81 ~vG~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~----  156 (321)
                      ++|+|++  ++|++|++||+|++.                              .|+|+||++++++.++++|+++    
T Consensus        84 ~~G~V~~--~~v~~~~vGdrV~~~------------------------------~G~~aey~~v~~~~~~~iP~~~~~~~  131 (357)
T 2zb4_A           84 GIGIIEE--SKHTNLTKGDFVTSF------------------------------YWPWQTKVILDGNSLEKVDPQLVDGH  131 (357)
T ss_dssp             EEEEEEE--ECSTTCCTTCEEEEE------------------------------EEESBSEEEEEGGGCEECCGGGGTTC
T ss_pred             EEEEEEe--cCCCCCCCCCEEEec------------------------------CCCcEEEEEEchHHceecCcccccCc
Confidence            9999999  889999999999874                              3899999999999999999999    


Q ss_pred             -ChhhhccchhhHHHHHHH-HHcCCCCC--CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH-cCCCeE
Q 020768          157 -SLEEGAMCEPLSVGLHAC-RRANIGPE--TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGADNI  230 (321)
Q Consensus       157 -~~~~aa~~~~~~~a~~~l-~~~~~~~g--~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~-~g~~~v  230 (321)
                       +++.|++..+++|||+++ +.+++++|  ++|||+|+ |++|++++|+++..|+++|+++++++++.+.+++ +|++.+
T Consensus       132 ~~~~~a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~  211 (357)
T 2zb4_A          132 LSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAA  211 (357)
T ss_dssp             GGGGGTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEE
T ss_pred             hhHHHHhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceE
Confidence             666555667899999999 67999999  99999998 9999999999999999678999999999998887 999988


Q ss_pred             EecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC-ccccc---------hhhhc
Q 020768          231 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE-MTVPL---------TPAAA  300 (321)
Q Consensus       231 i~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~---------~~~~~  300 (321)
                      +++.+  .++.+.+.+..   +.++|++|||+|+ ..++.++++|+++|+++.+|..... .+++.         ..++.
T Consensus       212 ~d~~~--~~~~~~~~~~~---~~~~d~vi~~~G~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~  285 (357)
T 2zb4_A          212 INYKK--DNVAEQLRESC---PAGVDVYFDNVGG-NISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKE  285 (357)
T ss_dssp             EETTT--SCHHHHHHHHC---TTCEEEEEESCCH-HHHHHHHHTEEEEEEEEECCCGGGTTSCCCSSCCCCHHHHHHHHH
T ss_pred             EecCc--hHHHHHHHHhc---CCCCCEEEECCCH-HHHHHHHHHhccCcEEEEECCccccccCccccccchhhhhhhhhc
Confidence            88654  45666555542   3389999999996 7899999999999999999965431 23332         45788


Q ss_pred             cceEEEEeehh
Q 020768          301 RYLIYSFLFHF  311 (321)
Q Consensus       301 k~~~i~g~~~~  311 (321)
                      |++++.|+..+
T Consensus       286 ~~~~i~g~~~~  296 (357)
T 2zb4_A          286 RNITRERFLVL  296 (357)
T ss_dssp             HTCEEEECCGG
T ss_pred             ceeEEEEeehh
Confidence            99999998764

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=1e-38  Score=287.64  Aligned_cols=240  Identities=24%  Similarity=0.323  Sum_probs=200.9

Q ss_pred             ceeEEEccCCC-eEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768           18 NMAAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (321)
Q Consensus        18 ~~a~~~~~~~~-l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~   96 (321)
                      ||++++.+++. ..++|+|.|+|+++||+|||.++++|++|++++.|.++..  ..+|.++|||++|+|+          
T Consensus         1 Mka~~~~~~g~~~~l~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~~p~i~G~e~~G~V~----------   68 (302)
T 1iz0_A            1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTR--LHPPFIPGMEVVGVVE----------   68 (302)
T ss_dssp             CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSC--CCSSBCCCCEEEEEET----------
T ss_pred             CeEEEEcCCCCchheEECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCC--CCCCCcccceEEEEEE----------
Confidence            78999987654 3467999999999999999999999999999998854321  3579999999999997          


Q ss_pred             CCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHHHHH
Q 020768           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHACR  175 (321)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~~l~  175 (321)
                       ||+|++.+                            .+|+|+||++++++.++++|+++++++||.+ .++.|||+++.
T Consensus        69 -GdrV~~~~----------------------------~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~  119 (302)
T 1iz0_A           69 -GRRYAALV----------------------------PQGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALK  119 (302)
T ss_dssp             -TEEEEEEC----------------------------SSCCSBSEEEEEGGGCEECCTTCCHHHHHTSHHHHHHHHHHHH
T ss_pred             -CcEEEEec----------------------------CCcceeeEEEEcHHHcEeCCCCCCHHHHHHhhhHHHHHHHHHH
Confidence             99998752                            3599999999999999999999999998755 48999999996


Q ss_pred             -HcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCC
Q 020768          176 -RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       176 -~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~  253 (321)
                       .+ +++|++|||+|+ |++|++++|+|+.+|+ .|+++++++++.++++++|++.++++.+. .++.+   .+     .
T Consensus       120 ~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~-~~~~~---~~-----~  188 (302)
T 1iz0_A          120 RAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAATYAEV-PERAK---AW-----G  188 (302)
T ss_dssp             HTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEEGGGH-HHHHH---HT-----T
T ss_pred             Hhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEECCcc-hhHHH---Hh-----c
Confidence             56 999999999998 9999999999999999 79999999999999999999998875320 22222   11     5


Q ss_pred             CccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC-ccccchhhhccceEEEEeehh
Q 020768          254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE-MTVPLTPAAARYLIYSFLFHF  311 (321)
Q Consensus       254 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~k~~~i~g~~~~  311 (321)
                      ++|++|| +|+ ..++.++++++++|+++.+|..... .++++..++.|++++.|+...
T Consensus       189 ~~d~vid-~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~  245 (302)
T 1iz0_A          189 GLDLVLE-VRG-KEVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLT  245 (302)
T ss_dssp             SEEEEEE-CSC-TTHHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEEECCHH
T ss_pred             CceEEEE-CCH-HHHHHHHHhhccCCEEEEEeCCCCCCCCcCHHHHHhCCCeEEEEecc
Confidence            7999999 998 6889999999999999999976543 357777889999999998754

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=7.1e-38  Score=287.25  Aligned_cols=261  Identities=16%  Similarity=0.117  Sum_probs=211.2

Q ss_pred             chhhceeEEEc-----cCC--CeEEE--EecCCC-CCCCcEEEEEeEeecccccHhhhhccccCC-cCCCCCccccccee
Q 020768           14 GEEVNMAAWLL-----GVN--TLKIQ--PFELPS-LGPYDVLVRMKAVGICGSDVHYLKTLRCAD-FVVKEPMVIGHECA   82 (321)
Q Consensus        14 ~~~~~~a~~~~-----~~~--~l~~~--e~~~p~-~~~~evlVkv~a~~l~~~D~~~~~g~~~~~-~~~~~p~~~G~e~v   82 (321)
                      |+.|||++++.     +++  .++++  ++|.|. |+++||||||.++++|+.|. ...|..... ....+|+++|||++
T Consensus         1 m~~~mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~~   79 (345)
T 2j3h_A            1 MTATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPIQ   79 (345)
T ss_dssp             CEEEEEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBCE
T ss_pred             CCccceEEEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCeee
Confidence            45678888775     345  69998  889887 89999999999999888875 444432110 00246899999999


Q ss_pred             EEEEE--eCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCc--EEECCC---C
Q 020768           83 GVIEK--VGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL--CFKLPD---N  155 (321)
Q Consensus        83 G~V~~--vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~--~~~ip~---~  155 (321)
                      |++++  +|+++++|++||+|++.                               |+|+||+++++..  ++++|+   .
T Consensus        80 G~~~~GvV~~~v~~~~vGdrV~~~-------------------------------g~~aey~~v~~~~~~~~~ip~~~~~  128 (345)
T 2j3h_A           80 GYGVSRIIESGHPDYKKGDLLWGI-------------------------------VAWEEYSVITPMTHAHFKIQHTDVP  128 (345)
T ss_dssp             EEEEEEEEEECSTTCCTTCEEEEE-------------------------------EESBSEEEECCCTTTCEEECCCSSC
T ss_pred             cceEEEEEecCCCCCCCCCEEEee-------------------------------cCceeEEEecccccceeecCCCCCC
Confidence            99999  99999999999999864                               8899999999876  999996   3


Q ss_pred             CChhhhccchhhHHHHHHH-HHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-HcCCCeEEe
Q 020768          156 VSLEEGAMCEPLSVGLHAC-RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADNIVK  232 (321)
Q Consensus       156 ~~~~~aa~~~~~~~a~~~l-~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~g~~~vi~  232 (321)
                      ++++.|++..+++|||+++ +.+++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.++++ ++|++.+++
T Consensus       129 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~~d  207 (345)
T 2j3h_A          129 LSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGC-YVVGSAGSKEKVDLLKTKFGFDDAFN  207 (345)
T ss_dssp             TTGGGTTTSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTSCCSEEEE
T ss_pred             HHHHHHhccccHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCceEEe
Confidence            5656555556889999999 5689999999999998 9999999999999999 7999999999999998 799998888


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC------CccccchhhhccceEEE
Q 020768          233 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL------EMTVPLTPAAARYLIYS  306 (321)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~k~~~i~  306 (321)
                      +.+. .++.+.+.+.   .+.++|++||++|+ ..++.++++|+++|+++.+|....      ...++...++.|++++.
T Consensus       208 ~~~~-~~~~~~~~~~---~~~~~d~vi~~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~  282 (345)
T 2j3h_A          208 YKEE-SDLTAALKRC---FPNGIDIYFENVGG-KMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQ  282 (345)
T ss_dssp             TTSC-SCSHHHHHHH---CTTCEEEEEESSCH-HHHHHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHHHHTCEEE
T ss_pred             cCCH-HHHHHHHHHH---hCCCCcEEEECCCH-HHHHHHHHHHhcCCEEEEEccccccccCCccccccHHHHhhhceeec
Confidence            6532 3555555554   24689999999997 689999999999999999996543      34567777899999999


Q ss_pred             EeehhH
Q 020768          307 FLFHFF  312 (321)
Q Consensus       307 g~~~~~  312 (321)
                      |+..+.
T Consensus       283 g~~~~~  288 (345)
T 2j3h_A          283 GFVVSD  288 (345)
T ss_dssp             ECCGGG
T ss_pred             eeeehh
Confidence            987654

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=1.1e-36  Score=277.99  Aligned_cols=252  Identities=18%  Similarity=0.166  Sum_probs=207.9

Q ss_pred             hhhceeEEEccC-------CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEE
Q 020768           15 EEVNMAAWLLGV-------NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK   87 (321)
Q Consensus        15 ~~~~~a~~~~~~-------~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~   87 (321)
                      +++||++++...       +.++++|+|.|+|+++||||||.++++|+.|... .    .  ...+|.++|||++|+|++
T Consensus         5 ~~~mka~~~~~~~~g~~~~~~l~~~e~~~P~~~~~eVlVkv~a~gi~~~~~~~-~----~--~~~~p~~~g~e~~G~Vv~   77 (333)
T 1v3u_A            5 MVKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIA-S----K--RLKEGAVMMGQQVARVVE   77 (333)
T ss_dssp             CCEEEEEEECC-----CCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHH-T----T--TCCTTSBCCCCEEEEEEE
T ss_pred             cccccEEEEeecCCCCCCccceEEEeCCCCCCCCCEEEEEEEEeccCHHHccc-c----C--cCCCCcccccceEEEEEe
Confidence            456999998752       5699999999999999999999999999988632 1    1  145688999999999999


Q ss_pred             eCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCC----CChhh--h
Q 020768           88 VGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN----VSLEE--G  161 (321)
Q Consensus        88 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~----~~~~~--a  161 (321)
                      .  ++++|++||+|++.                               |+|+||++++++.++++|++    +++++  |
T Consensus        78 ~--~v~~~~vGdrV~~~-------------------------------g~~aey~~v~~~~~~~iP~~~~~~~~~~~a~a  124 (333)
T 1v3u_A           78 S--KNSAFPAGSIVLAQ-------------------------------SGWTTHFISDGKGLEKLLTEWPDKLPLSLALG  124 (333)
T ss_dssp             E--SCTTSCTTCEEEEC-------------------------------CCSBSEEEESSTTEEECC--CCTTSCGGGGGT
T ss_pred             c--CCCCCCCCCEEEec-------------------------------CceEEEEEechHHeEEcCcccccCCCHHHHHH
Confidence            5  67899999999863                               89999999999999999997    88776  3


Q ss_pred             ccchhhHHHHHHH-HHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCccc
Q 020768          162 AMCEPLSVGLHAC-RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQD  239 (321)
Q Consensus       162 a~~~~~~~a~~~l-~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~  239 (321)
                      ++..+++|||+++ +.+++++|++|||+|+ |++|++++|+++..|+ .|+++++++++.+.++++|++.++++.+. .+
T Consensus       125 ~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~d~~~~-~~  202 (333)
T 1v3u_A          125 TIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGFDAAFNYKTV-NS  202 (333)
T ss_dssp             TTSHHHHHHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTSC-SC
T ss_pred             HhCChHHHHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCcEEEecCCH-HH
Confidence            4556889999999 5689999999999998 9999999999999999 79999999999999999999988876531 45


Q ss_pred             HHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC------Cc-cccchhhhccceEEEEeehhH
Q 020768          240 IAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL------EM-TVPLTPAAARYLIYSFLFHFF  312 (321)
Q Consensus       240 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~-~~~~~~~~~k~~~i~g~~~~~  312 (321)
                      +.+.+.+..   ++++|++||++|+ ..++.++++|+++|+++++|....      .. .++...++.|++++.|++.+.
T Consensus       203 ~~~~~~~~~---~~~~d~vi~~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~  278 (333)
T 1v3u_A          203 LEEALKKAS---PDGYDCYFDNVGG-EFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYR  278 (333)
T ss_dssp             HHHHHHHHC---TTCEEEEEESSCH-HHHHHHHTTEEEEEEEEECCCCC-------CCBCCCHHHHHHTTCEEEECCGGG
T ss_pred             HHHHHHHHh---CCCCeEEEECCCh-HHHHHHHHHHhcCCEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEEEehhh
Confidence            665555542   3589999999996 578999999999999999997643      11 235667889999999987643

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=6e-37  Score=307.65  Aligned_cols=241  Identities=21%  Similarity=0.292  Sum_probs=203.2

Q ss_pred             CCCeEEEEecC--CCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEE
Q 020768           26 VNTLKIQPFEL--PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVAL  103 (321)
Q Consensus        26 ~~~l~~~e~~~--p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~  103 (321)
                      ++.+++++.|.  |+|+++||+|||.++|||++|++++.|.+      +.|.++|||++|+|+++|++|++|++||+|..
T Consensus       221 ~~~L~~~~~~~p~~~~~~~eVlV~V~a~gin~~D~~~~~G~~------~~~~~lG~E~aG~V~~vG~~V~~~~vGDrV~~  294 (795)
T 3slk_A          221 LDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMY------PGVASLGSEGAGVVVETGPGVTGLAPGDRVMG  294 (795)
T ss_dssp             STTEEECCCHHHHSCCCSSEEEEEEEEEEECHHHHHHTTTCC------SSCCCSCCCEEEEEEEECSSCCSSCTTCEEEE
T ss_pred             ccceEEEeCCccCCCCCCCEEEEEEEEEccCHHHHHHHcCCC------CCCccccceeEEEEEEeCCCCCcCCCCCEEEE
Confidence            36789988774  57899999999999999999999988754      34668999999999999999999999999987


Q ss_pred             cCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHHH-HHcCCCC
Q 020768          104 EPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGP  181 (321)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~  181 (321)
                      .                             .+|+|+||++++++.++++|+++++++||+++ .+.|+|+++ +.+++++
T Consensus       295 ~-----------------------------~~G~~ae~~~v~~~~~~~iP~~ls~~~AA~l~~~~~Ta~~al~~~a~l~~  345 (795)
T 3slk_A          295 M-----------------------------IPKAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRP  345 (795)
T ss_dssp             C-----------------------------CSSCSSSEEEEETTSEEECCTTCCHHHHHHHHHHHHHHHCCCCCCTCCCT
T ss_pred             E-----------------------------ecCCCcCEEEeehHHEEECCCCCCHHHHHhhhHHHHHHHHHHHHHhCCCC
Confidence            5                             35999999999999999999999999999876 678899887 5689999


Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      |++|||+|+ |++|++++|+||++|+ .|+++.+++ |.++++ +|+++++++.  ..++.+.++++  +.+.|+|+|||
T Consensus       346 G~~VLI~gaaGgvG~~aiqlAk~~Ga-~V~~t~~~~-k~~~l~-lga~~v~~~~--~~~~~~~i~~~--t~g~GvDvVld  418 (795)
T 3slk_A          346 GESLLVHSAAGGVGMAAIQLARHLGA-EVYATASED-KWQAVE-LSREHLASSR--TCDFEQQFLGA--TGGRGVDVVLN  418 (795)
T ss_dssp             TCCEEEESTTBHHHHHHHHHHHHTTC-CEEEECCGG-GGGGSC-SCGGGEECSS--SSTHHHHHHHH--SCSSCCSEEEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeChH-Hhhhhh-cChhheeecC--ChhHHHHHHHH--cCCCCeEEEEE
Confidence            999999997 9999999999999999 577776555 556555 9999988754  35777777665  34779999999


Q ss_pred             cCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeeh
Q 020768          261 CAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFH  310 (321)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~  310 (321)
                      ++|+ +.++.++++|+++|+++.+|.........+... .+++++.++..
T Consensus       419 ~~gg-~~~~~~l~~l~~~Gr~v~iG~~~~~~~~~~~~~-~~~~~~~~~~l  466 (795)
T 3slk_A          419 SLAG-EFADASLRMLPRGGRFLELGKTDVRDPVEVADA-HPGVSYQAFDT  466 (795)
T ss_dssp             CCCT-TTTHHHHTSCTTCEEEEECCSTTCCCHHHHHHH-SSSEEEEECCG
T ss_pred             CCCc-HHHHHHHHHhcCCCEEEEeccccccCccccccc-CCCCEEEEeec
Confidence            9997 688999999999999999997655444444333 47888887643

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.95  E-value=2.6e-27  Score=260.30  Aligned_cols=241  Identities=16%  Similarity=0.172  Sum_probs=195.1

Q ss_pred             CCeEEEEecCCC-CC--CCcEEEEEeEeecccccHhhhhccccCCc----CCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 020768           27 NTLKIQPFELPS-LG--PYDVLVRMKAVGICGSDVHYLKTLRCADF----VVKEPMVIGHECAGVIEKVGSEVKTLVPGD   99 (321)
Q Consensus        27 ~~l~~~e~~~p~-~~--~~evlVkv~a~~l~~~D~~~~~g~~~~~~----~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd   99 (321)
                      ..+.+.+.+... +.  ++||+|||.++++|+.|+.+..|..+...    ....|.++|+|++|+|.          +||
T Consensus      1542 ~sl~~~~~~~~~~~~l~~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V~----------vGd 1611 (2512)
T 2vz8_A         1542 SSIRWVCSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRDA----------SGR 1611 (2512)
T ss_dssp             TSEEEEECTTTTCCCHHHHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEET----------TSC
T ss_pred             CceEEEecCcccccCCCCCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEEc----------cCC
Confidence            467888776543 33  78999999999999999999988653211    12346789999999882          799


Q ss_pred             EEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHHH-HHc
Q 020768          100 RVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRA  177 (321)
Q Consensus       100 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l-~~~  177 (321)
                      +|+..                            ...|+|+||++++++.++++|+++++++||+++ +++|+|+++ +.+
T Consensus      1612 rV~g~----------------------------~~~G~~Aeyv~vp~~~v~~iPd~ls~~eAA~lp~~~~TA~~al~~~a 1663 (2512)
T 2vz8_A         1612 RVMGM----------------------------VPAEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRG 1663 (2512)
T ss_dssp             CEEEE----------------------------CSSCCSBSEEECCGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTT
T ss_pred             EEEEe----------------------------ecCCceeeEEEcccceEEEeCCCCCHHHHHHhHHHHHHHHHHHHHHh
Confidence            99875                            235999999999999999999999999999887 778999998 568


Q ss_pred             CCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHhC
Q 020768          178 NIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       178 ~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~~~~  252 (321)
                      ++++|++|||+|+ |++|++++|+||++|+ .|++++.+++|.+++++    +|+++++++.+  .++.+.+.+.  +.+
T Consensus      1664 ~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga-~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~--~~~~~~i~~~--t~g 1738 (2512)
T 2vz8_A         1664 RMQPGESVLIHSGSGGVGQAAIAIALSRGC-RVFTTVGSAEKRAYLQARFPQLDETCFANSRD--TSFEQHVLRH--TAG 1738 (2512)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTCCSTTEEESSS--SHHHHHHHHT--TTS
T ss_pred             cCCCCCEEEEEeCChHHHHHHHHHHHHcCC-EEEEEeCChhhhHHHHhhcCCCCceEEecCCC--HHHHHHHHHh--cCC
Confidence            8999999999987 9999999999999999 68889899999999886    78888888643  4666665543  346


Q ss_pred             CCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC-ccccchhhhccceEEEEeehh
Q 020768          253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE-MTVPLTPAAARYLIYSFLFHF  311 (321)
Q Consensus       253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~k~~~i~g~~~~  311 (321)
                      .|+|+|||+++ .+.++.++++|+++|+++.+|..... .......++.|++++.|+...
T Consensus      1739 ~GvDvVld~~g-~~~l~~~l~~L~~~Gr~V~iG~~~~~~~~~~~~~~~~~~~~~~g~~l~ 1797 (2512)
T 2vz8_A         1739 KGVDLVLNSLA-EEKLQASVRCLAQHGRFLEIGKFDLSNNHALGMAVFLKNVTFHGILLD 1797 (2512)
T ss_dssp             CCEEEEEECCC-HHHHHHHHTTEEEEEEEEECCCHHHHTTCEEEGGGGGGCCEEEECCGG
T ss_pred             CCceEEEECCC-chHHHHHHHhcCCCcEEEEeecccccccCcccccccccCCcEEEeeHH
Confidence            78999999998 57899999999999999999954321 112223467799999998653

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.80  E-value=6e-19  Score=148.55  Aligned_cols=156  Identities=23%  Similarity=0.370  Sum_probs=117.5

Q ss_pred             CcEEECCCCCChhhhccch-hhHHHHHHHH-HcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH
Q 020768          147 DLCFKLPDNVSLEEGAMCE-PLSVGLHACR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK  223 (321)
Q Consensus       147 ~~~~~ip~~~~~~~aa~~~-~~~~a~~~l~-~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~  223 (321)
                      +.++++|+++++++||+++ ++.|||+++. .+++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++
T Consensus         2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~   80 (198)
T 1pqw_A            2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLS   80 (198)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHH
T ss_pred             CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence            5688999999999999775 8899999995 478999999999997 9999999999999998 7889999999999999


Q ss_pred             HcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC--Cccccchhhhcc
Q 020768          224 ELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL--EMTVPLTPAAAR  301 (321)
Q Consensus       224 ~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~k  301 (321)
                      ++|++.++++.+  .++.+.+.+..  .+.++|++||++|. ..++.++++|+++|+++.+|....  ..++++. ++.|
T Consensus        81 ~~g~~~~~d~~~--~~~~~~~~~~~--~~~~~D~vi~~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~  154 (198)
T 1pqw_A           81 RLGVEYVGDSRS--VDFADEILELT--DGYGVDVVLNSLAG-EAIQRGVQILAPGGRFIELGKKDVYADASLGLA-ALAK  154 (198)
T ss_dssp             TTCCSEEEETTC--STHHHHHHHHT--TTCCEEEEEECCCT-HHHHHHHHTEEEEEEEEECSCGGGTTTCEEEGG-GGTT
T ss_pred             HcCCCEEeeCCc--HHHHHHHHHHh--CCCCCeEEEECCch-HHHHHHHHHhccCCEEEEEcCCCCcCcCcCChh-HhcC
Confidence            999988877643  34555554432  24579999999985 688999999999999999997642  2345554 4579


Q ss_pred             ceEEEEee
Q 020768          302 YLIYSFLF  309 (321)
Q Consensus       302 ~~~i~g~~  309 (321)
                      ++++.++.
T Consensus       155 ~~~~~~~~  162 (198)
T 1pqw_A          155 SASFSVVD  162 (198)
T ss_dssp             TCEEEECC
T ss_pred             CcEEEEEe
Confidence            99999763

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=99.27  E-value=7e-12  Score=108.50  Aligned_cols=169  Identities=11%  Similarity=0.052  Sum_probs=114.7

Q ss_pred             CCCCCEEEEcC-------CccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhc-----
Q 020768           95 LVPGDRVALEP-------GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA-----  162 (321)
Q Consensus        95 ~~~Gd~V~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa-----  162 (321)
                      +++||+|++.+       ...|+.|.+|+.|..++|...+.     ..|...      +..+++.|+...+.+.+     
T Consensus         4 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~G~~~~~~~~g~-----~~G~~~------~~~~~~~p~~~~~~~~~~~~~~   72 (248)
T 2yvl_A            4 FKEGEYVLIRFGEKKFLRKLLPKQSLSVKKSVLKFDEVIGK-----PEGVKI------NGFEVYRPTLEEIILLGFERKT   72 (248)
T ss_dssp             CCTTCEEEEEETTEEEEEECCTTCEEEETTEEEEGGGTTTC-----CTTEEE------TTEEEECCCHHHHHHHTSCCSS
T ss_pred             CCCCCEEEEEeCCeEEEEEEcCCCEEecCCceEEHHHhcCC-----CCCCEE------EEEEEeCCCHHHHHHhcCcCCC
Confidence            89999999988       67899999999888888865421     112222      34444444433333222     


Q ss_pred             -cchhhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHc----CC-CeEEecCCC
Q 020768          163 -MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL----GA-DNIVKVSTN  236 (321)
Q Consensus       163 -~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~----g~-~~vi~~~~~  236 (321)
                       .+.+.. +.+.+....++++++||.+|+| .|..+..+++. +. .+++++.+++..+.+++.    +. +.+..... 
T Consensus        73 ~~~~~~~-~~~~~~~~~~~~~~~vldiG~G-~G~~~~~l~~~-~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~-  147 (248)
T 2yvl_A           73 QIIYPKD-SFYIALKLNLNKEKRVLEFGTG-SGALLAVLSEV-AG-EVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNV-  147 (248)
T ss_dssp             CCCCHHH-HHHHHHHTTCCTTCEEEEECCT-TSHHHHHHHHH-SS-EEEEECSCHHHHHHHHHHHHHTTCCTTEEEECS-
T ss_pred             Ccccchh-HHHHHHhcCCCCCCEEEEeCCC-ccHHHHHHHHh-CC-EEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEc-
Confidence             222333 3355677888999999999998 69999999998 55 899999999988887753    43 22211111 


Q ss_pred             cccHHHHHHHHHHHhCCCccEEEEcCCCH-HHHHHHHHHcccCCEEEEEcC
Q 020768          237 LQDIAEEVEKIQKAMGTGIDVSFDCAGFN-KTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~  286 (321)
                        +..+..     ....++|+|+...+.+ ..++.+.+.|+++|++++...
T Consensus       148 --d~~~~~-----~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  191 (248)
T 2yvl_A          148 --DFKDAE-----VPEGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLP  191 (248)
T ss_dssp             --CTTTSC-----CCTTCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred             --Chhhcc-----cCCCcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence              111100     0135799999988876 788999999999999998874

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=99.03  E-value=2.5e-12  Score=119.72  Aligned_cols=182  Identities=15%  Similarity=0.231  Sum_probs=131.7

Q ss_pred             cccccceeEEEEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCC
Q 020768           75 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD  154 (321)
Q Consensus        75 ~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~  154 (321)
                      ...|+|.++.|.++|.+++++.+|+.++.-....                   .+......|++++|+..+...++.+|+
T Consensus        75 ~~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk~-------------------~~~~~~~~G~~~~~~~~~~~~a~~~~k  135 (404)
T 1gpj_A           75 VKRGSEAVRHLFRVASGLESMMVGEQEILRQVKK-------------------AYDRAARLGTLDEALKIVFRRAINLGK  135 (404)
T ss_dssp             EEEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHH-------------------HHHHHHHHTCCCHHHHHHHHHHHHHHH
T ss_pred             eecCchHhhhheeeccCCCCCcCCcchhHHHHHH-------------------HHHHHHHcCCchHHHHHHHHHHhhhhc
Confidence            4689999999999999999999999874311000                   000001247788888888888889998


Q ss_pred             CCChhhhccchhhHHHHHHHHHcC----CCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHH-HHHHHcCCCe
Q 020768          155 NVSLEEGAMCEPLSVGLHACRRAN----IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRL-SVAKELGADN  229 (321)
Q Consensus       155 ~~~~~~aa~~~~~~~a~~~l~~~~----~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~-~~~~~~g~~~  229 (321)
                      .++...++...+.++++.+++.+.    -.+|++|+|+|+|++|.++++.++.+|++.|++++++.++. ++++++|++ 
T Consensus       136 ~v~~~~~~~~~~~s~a~~av~~a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~-  214 (404)
T 1gpj_A          136 RAREETRISEGAVSIGSAAVELAERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-  214 (404)
T ss_dssp             HHHHHSSTTCSCCSHHHHHHHHHHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-
T ss_pred             cCcchhhhcCCCccHHHHHHHHHHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-
Confidence            888777766667777887765432    25799999999999999999999999997899999998886 678889875 


Q ss_pred             EEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHH--HHHHH--c--ccCCEEEEEcCCC
Q 020768          230 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMS--TALSA--T--RAGGKVCLVGMGH  288 (321)
Q Consensus       230 vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~--~~~~~--l--~~~G~~v~~g~~~  288 (321)
                      ++++    .++.+    ..    .++|+|++|++.+..+.  ..+..  +  ++++.+++++...
T Consensus       215 ~~~~----~~l~~----~l----~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~  267 (404)
T 1gpj_A          215 AVRF----DELVD----HL----ARSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIAN  267 (404)
T ss_dssp             ECCG----GGHHH----HH----HTCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCS
T ss_pred             eecH----HhHHH----Hh----cCCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccC
Confidence            3332    12222    21    36899999998754332  34444  4  5678888888654

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.93  E-value=2.3e-09  Score=98.13  Aligned_cols=117  Identities=17%  Similarity=0.178  Sum_probs=89.1

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCe--EEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN--IVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~--vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      +++|+|+|+|++|+++++.++.+|+ .|++++++++|.+.+++++...  +++.  ...++.+   .+     .++|++|
T Consensus       167 ~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~~~~~~~~--~~~~~~~---~~-----~~~DvVI  235 (361)
T 1pjc_A          167 PGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYS--NSAEIET---AV-----AEADLLI  235 (361)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEEC--CHHHHHH---HH-----HTCSEEE
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCceeEeeeC--CHHHHHH---HH-----cCCCEEE
Confidence            4899999999999999999999999 8999999999999988776543  2321  1122221   11     2689999


Q ss_pred             EcCCCHHH------HHHHHHHcccCCEEEEEcCCCC-------CccccchhhhccceEEEEee
Q 020768          260 DCAGFNKT------MSTALSATRAGGKVCLVGMGHL-------EMTVPLTPAAARYLIYSFLF  309 (321)
Q Consensus       260 d~~g~~~~------~~~~~~~l~~~G~~v~~g~~~~-------~~~~~~~~~~~k~~~i~g~~  309 (321)
                      +|++.+..      .+..++.++++|+++.++...+       ..+++...+..+++++.|..
T Consensus       236 ~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~  298 (361)
T 1pjc_A          236 GAVLVPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVP  298 (361)
T ss_dssp             ECCCCTTSSCCCCBCHHHHTTSCTTCEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCS
T ss_pred             ECCCcCCCCCCeecCHHHHhhCCCCCEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeC
Confidence            99987542      5677899999999999996543       34566666788999998854

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.75  E-value=2.5e-08  Score=94.28  Aligned_cols=122  Identities=16%  Similarity=0.160  Sum_probs=94.0

Q ss_pred             HHHHHHHHHc--CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHH
Q 020768          168 SVGLHACRRA--NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVE  245 (321)
Q Consensus       168 ~~a~~~l~~~--~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~  245 (321)
                      .++++++++.  ...+|++|+|+|+|.+|..+++.++.+|+ +|++++.++++.+.++++|++ +++       +.+   
T Consensus       258 ~s~~~g~~r~~~~~l~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~~~~~~~A~~~Ga~-~~~-------l~e---  325 (494)
T 3ce6_A          258 HSLIDGINRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEIDPINALQAMMEGFD-VVT-------VEE---  325 (494)
T ss_dssp             HHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-ECC-------HHH---
T ss_pred             hhhhHHHHhccCCCCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCE-Eec-------HHH---
Confidence            3456666543  37899999999999999999999999999 799999999999889999985 221       111   


Q ss_pred             HHHHHhCCCccEEEEcCCCHHHHH-HHHHHcccCCEEEEEcCCCCCccccchhhhccce---EEEEe
Q 020768          246 KIQKAMGTGIDVSFDCAGFNKTMS-TALSATRAGGKVCLVGMGHLEMTVPLTPAAARYL---IYSFL  308 (321)
Q Consensus       246 ~~~~~~~~~~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~---~i~g~  308 (321)
                       +    -.++|+|++++|+...+. ..++.++++|+++.+|...  .+++...+..+.+   ++.+.
T Consensus       326 -~----l~~aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG~~~--~eId~~aL~~~aL~~~~I~~~  385 (494)
T 3ce6_A          326 -A----IGDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFD--NEIDMAGLERSGATRVNVKPQ  385 (494)
T ss_dssp             -H----GGGCSEEEECSSSSCSBCHHHHHHSCTTCEEEECSSSG--GGBCHHHHHHTTCEEEEEETT
T ss_pred             -H----HhCCCEEEECCCCHHHHHHHHHHhcCCCcEEEEeCCCC--CccCHHHHHHhhhccceEEEE
Confidence             1    136899999999877666 7889999999999999653  3567666665444   55543

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.74  E-value=3.4e-08  Score=91.14  Aligned_cols=126  Identities=20%  Similarity=0.206  Sum_probs=90.0

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeE-EecCCC-------------ccc----HHH
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI-VKVSTN-------------LQD----IAE  242 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-i~~~~~-------------~~~----~~~  242 (321)
                      ++++|+|+|+|.+|+.++++++.+|+ .|++++.++++.+.++++|++.+ ++.++.             +++    ..+
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~  249 (384)
T 1l7d_A          171 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  249 (384)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence            68999999999999999999999999 69999999999998988998654 222100             000    111


Q ss_pred             HHHHHHHHhCCCccEEEEcC---CCHH--H-HHHHHHHcccCCEEEEEcCCC-CCc--cccchhhhccceEEEEeehh
Q 020768          243 EVEKIQKAMGTGIDVSFDCA---GFNK--T-MSTALSATRAGGKVCLVGMGH-LEM--TVPLTPAAARYLIYSFLFHF  311 (321)
Q Consensus       243 ~~~~~~~~~~~~~d~vid~~---g~~~--~-~~~~~~~l~~~G~~v~~g~~~-~~~--~~~~~~~~~k~~~i~g~~~~  311 (321)
                      .+.++    -.++|+||+|+   |.+.  . ....++.+++++.++.++... +..  ..+...+..+++++.|+...
T Consensus       250 ~l~~~----~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~gg~~~~~~~~~~~~~~~v~i~g~~~~  323 (384)
T 1l7d_A          250 AVLKE----LVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNV  323 (384)
T ss_dssp             HHHHH----HTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSSTTCCTTCEEEETTEEEECCSSG
T ss_pred             HHHHH----hCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCCCCCeecccCCcEEEECCEEEEEeCCC
Confidence            13222    24699999999   5322  2 267889999999999999643 332  23445577899999998653

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.70  E-value=1.1e-07  Score=87.34  Aligned_cols=118  Identities=19%  Similarity=0.231  Sum_probs=79.9

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH-cCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      ++++|+|+|+|.+|+.+++.++.+|+ .|+++++++++.+.+++ +|.+...+..+ ..+    +.+..    .++|++|
T Consensus       165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~g~~~~~~~~~-~~~----l~~~~----~~~DvVi  234 (369)
T 2eez_A          165 APASVVILGGGTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDVFGGRVITLTAT-EAN----IKKSV----QHADLLI  234 (369)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSEEEEECC-HHH----HHHHH----HHCSEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCceEEEecCC-HHH----HHHHH----hCCCEEE
Confidence            36899999999999999999999999 79999999999887765 77763233221 122    22221    2589999


Q ss_pred             EcCCCHHH------HHHHHHHcccCCEEEEEcCCCC-------CccccchhhhccceEEEEe
Q 020768          260 DCAGFNKT------MSTALSATRAGGKVCLVGMGHL-------EMTVPLTPAAARYLIYSFL  308 (321)
Q Consensus       260 d~~g~~~~------~~~~~~~l~~~G~~v~~g~~~~-------~~~~~~~~~~~k~~~i~g~  308 (321)
                      +|++.+..      .+..++.++++|+++.++...+       +.+++...+..+++++.|.
T Consensus       235 ~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v  296 (369)
T 2eez_A          235 GAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGV  296 (369)
T ss_dssp             ECCC-------CCSCHHHHTTSCTTCEEEECC-------------------CEETTEEEECC
T ss_pred             ECCCCCccccchhHHHHHHHhhcCCCEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEee
Confidence            99996532      5678899999999999996543       2234444466788998764

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.68  E-value=9.2e-08  Score=87.99  Aligned_cols=120  Identities=13%  Similarity=0.189  Sum_probs=87.8

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH-cCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      +|++|+|+|+|.+|..+++.++.+|+ .|+++++++++.+.+++ +|.+...++.. ..+    +.++.    .++|+|+
T Consensus       167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~~~~~~~~~-~~~----l~~~l----~~aDvVi  236 (377)
T 2vhw_A          167 EPADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEFCGRIHTRYSS-AYE----LEGAV----KRADLVI  236 (377)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSSEEEECC-HHH----HHHHH----HHCSEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhcCCeeEeccCC-HHH----HHHHH----cCCCEEE
Confidence            57899999999999999999999999 79999999999888876 77763222211 112    22221    2589999


Q ss_pred             EcCCCHHH------HHHHHHHcccCCEEEEEcCCCC-------CccccchhhhccceEEEEeeh
Q 020768          260 DCAGFNKT------MSTALSATRAGGKVCLVGMGHL-------EMTVPLTPAAARYLIYSFLFH  310 (321)
Q Consensus       260 d~~g~~~~------~~~~~~~l~~~G~~v~~g~~~~-------~~~~~~~~~~~k~~~i~g~~~  310 (321)
                      +|++.+..      ....++.++++|.++.++...+       +.+++...+..+++++.++-+
T Consensus       237 ~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va~~~Ggv~e~~ep~~~~~~~~~~~~v~i~~~ph  300 (377)
T 2vhw_A          237 GAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIAIDQGGCFEGSRPTTYDHPTFAVHDTLFYCVAN  300 (377)
T ss_dssp             ECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGGGGTTCSBTTCCCBCSSSCEEEETTEEEECBTT
T ss_pred             ECCCcCCCCCcceecHHHHhcCCCCcEEEEEecCCCCccccccCCCCCCCEEEECCEEEEecCC
Confidence            99986543      5778899999999999995432       233444446678888875443

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.60  E-value=1.3e-07  Score=87.69  Aligned_cols=124  Identities=15%  Similarity=0.175  Sum_probs=87.9

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCC-------------cccH----HHH
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTN-------------LQDI----AEE  243 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~-------------~~~~----~~~  243 (321)
                      ++++|+|+|+|.+|+.++++|+.+|+ .|++++.+.++.+.++++|++.+. ++..             ..++    .+.
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~v~D~~~~~~~~~~~lGa~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~  248 (401)
T 1x13_A          171 PPAKVMVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLE-LDFKEEAGSGDGYAKVMSDAFIKAEMEL  248 (401)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCGGGHHHHHHTTCEECC-C--------CCHHHHHHSHHHHHHHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCEEEE-ecccccccccccchhhccHHHHHHHHHH
Confidence            58899999999999999999999999 799999999999989999986432 1110             0111    011


Q ss_pred             HHHHHHHhCCCccEEEEcCCCH-----HHH-HHHHHHcccCCEEEEEcCC-CCCccccc--h-hhhccceEEEEeeh
Q 020768          244 VEKIQKAMGTGIDVSFDCAGFN-----KTM-STALSATRAGGKVCLVGMG-HLEMTVPL--T-PAAARYLIYSFLFH  310 (321)
Q Consensus       244 ~~~~~~~~~~~~d~vid~~g~~-----~~~-~~~~~~l~~~G~~v~~g~~-~~~~~~~~--~-~~~~k~~~i~g~~~  310 (321)
                      +.++.    .++|+||++++.+     ..+ ...++.+++++.++.++.. ++..+.+.  . .+..+++++.|..+
T Consensus       249 l~e~~----~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~~~~~~p~~~~~gv~i~g~~~  321 (401)
T 1x13_A          249 FAAQA----KEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEYTVPGEIFTTENGVKVIGYTD  321 (401)
T ss_dssp             HHHHH----HHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTSEEECTTSCEEECCSC
T ss_pred             HHHHh----CCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCcccCCCceEEECCEEEEeeCC
Confidence            22221    3589999995322     223 5788999999999999965 33333322  2 16779999999765

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=98.38  E-value=1.4e-06  Score=76.42  Aligned_cols=188  Identities=16%  Similarity=0.108  Sum_probs=108.9

Q ss_pred             eCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCcccccc-CCCCCcceeEEEecCC--cEEECCCCCChhhhccc
Q 020768           88 VGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT-PPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMC  164 (321)
Q Consensus        88 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~G~~~~~~~v~~~--~~~~ip~~~~~~~aa~~  164 (321)
                      +|+....+++||+|++.....+..+..+..+....+....+ .. .-....+.+.+.++..  ....-|....+.++..-
T Consensus        13 ~~~~~~~~~~gd~v~i~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~i~g~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~   91 (277)
T 1o54_A           13 VGKVADTLKPGDRVLLSFEDESEFLVDLEKDKKLHTHLGII-DLNEVFEKGPGEIIRTSAGKKGYILIPSLIDEIMNMKR   91 (277)
T ss_dssp             CCCGGGCCCTTCEEEEEETTSCEEEEECCTTCEEEETTEEE-EHHHHTTSCTTCEEECTTCCEEEEECCCHHHHHHTCCC
T ss_pred             cccccCCCCCCCEEEEEECCCcEEEEEEcCCCEEecCCceE-EHHHhcCCCCCcEEEEcCCcEEEEeCCCHHHHHhhccc
Confidence            45555679999999987433333222333332211111110 00 0011234455555544  33444544333332210


Q ss_pred             ----hhhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHHHHc----CC-CeEEecC
Q 020768          165 ----EPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKEL----GA-DNIVKVS  234 (321)
Q Consensus       165 ----~~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~~~~----g~-~~vi~~~  234 (321)
                          ..-..+...+....++++++||-.|+|. |.+++.+++..+ ...+++++.+++..+.+++.    +. +.+....
T Consensus        92 ~~~~~~~~~~~~i~~~~~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~  170 (277)
T 1o54_A           92 RTQIVYPKDSSFIAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKV  170 (277)
T ss_dssp             -CCCCCHHHHHHHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEEC
T ss_pred             cCCccCHHHHHHHHHHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEE
Confidence                0111122345667889999999999977 888889999864 34899999999888877653    54 2222111


Q ss_pred             CCcccHHHHHHHHHHHhCCCccEEEEcCCCH-HHHHHHHHHcccCCEEEEEcC
Q 020768          235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFN-KTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      .   ++.+.   +   ....+|+|+.....+ ..+..+.+.|+++|++++...
T Consensus       171 ~---d~~~~---~---~~~~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  214 (277)
T 1o54_A          171 R---DISEG---F---DEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVCP  214 (277)
T ss_dssp             C---CGGGC---C---SCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred             C---CHHHc---c---cCCccCEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence            1   21111   1   134699999877765 678899999999999998763

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.28  E-value=4.3e-07  Score=71.70  Aligned_cols=108  Identities=11%  Similarity=0.062  Sum_probs=78.0

Q ss_pred             hhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHH-HHHHcCCCeEEecCCCcccHHHHH
Q 020768          166 PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEEV  244 (321)
Q Consensus       166 ~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~~  244 (321)
                      ++++++.+++.+....+++|+|+|+|.+|...++.++..|++ +.+.+++.++.+ ++++++.+. ...    .++.+.+
T Consensus         5 ~~sv~~~a~~~~~~~~~~~v~iiG~G~iG~~~a~~l~~~g~~-v~v~~r~~~~~~~~a~~~~~~~-~~~----~~~~~~~   78 (144)
T 3oj0_A            5 KVSIPSIVYDIVRKNGGNKILLVGNGMLASEIAPYFSYPQYK-VTVAGRNIDHVRAFAEKYEYEY-VLI----NDIDSLI   78 (144)
T ss_dssp             CCSHHHHHHHHHHHHCCCEEEEECCSHHHHHHGGGCCTTTCE-EEEEESCHHHHHHHHHHHTCEE-EEC----SCHHHHH
T ss_pred             cccHHHHHHHHHHhccCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcCCHHHHHHHHHHhCCce-Eee----cCHHHHh
Confidence            456677777665555699999999999999999999889985 888899988765 467788532 222    1222221


Q ss_pred             HHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCC
Q 020768          245 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       245 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  288 (321)
                              .++|+||.|++.+..+.. ...+++++.++.++.+.
T Consensus        79 --------~~~Divi~at~~~~~~~~-~~~l~~g~~vid~~~p~  113 (144)
T 3oj0_A           79 --------KNNDVIITATSSKTPIVE-ERSLMPGKLFIDLGNPP  113 (144)
T ss_dssp             --------HTCSEEEECSCCSSCSBC-GGGCCTTCEEEECCSSC
T ss_pred             --------cCCCEEEEeCCCCCcEee-HHHcCCCCEEEEccCCc
Confidence                    258999999997643222 26788999999998753

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=98.26  E-value=9.5e-06  Score=71.53  Aligned_cols=101  Identities=15%  Similarity=0.274  Sum_probs=76.0

Q ss_pred             HcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHc----CCCeEEecCCCcccHHHHHHHHHHHh
Q 020768          176 RANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL----GADNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       176 ~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~----g~~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      .+++++|++||.+|+|..++.++.+|+..|+ .|++++.+++..+.+++.    |.+.+-....+..+       +   .
T Consensus       117 la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga-~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~-------l---~  185 (298)
T 3fpf_A          117 LGRFRRGERAVFIGGGPLPLTGILLSHVYGM-RVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETV-------I---D  185 (298)
T ss_dssp             HTTCCTTCEEEEECCCSSCHHHHHHHHTTCC-EEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGG-------G---G
T ss_pred             HcCCCCcCEEEEECCCccHHHHHHHHHccCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhh-------C---C
Confidence            4788999999999999878888888888888 799999999988887753    65333222121111       1   1


Q ss_pred             CCCccEEEEcCCCH---HHHHHHHHHcccCCEEEEEcCC
Q 020768          252 GTGIDVSFDCAGFN---KTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       252 ~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      ...||+|+.....+   ..++.+.+.|++||++++....
T Consensus       186 d~~FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~~  224 (298)
T 3fpf_A          186 GLEFDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTYT  224 (298)
T ss_dssp             GCCCSEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred             CCCcCEEEECCCccCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence            36799999765543   5789999999999999987643

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=98.22  E-value=4.3e-06  Score=76.81  Aligned_cols=125  Identities=19%  Similarity=0.168  Sum_probs=87.0

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEec-------------CC-CcccH----HH
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV-------------ST-NLQDI----AE  242 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~-------------~~-~~~~~----~~  242 (321)
                      ++.+|+|+|+|.+|+.++++++.+|+ .|++.+.+.++.+.++++|++.+...             .. -..++    .+
T Consensus       189 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~  267 (405)
T 4dio_A          189 PAAKIFVMGAGVAGLQAIATARRLGA-VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA  267 (405)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence            57899999999999999999999999 79999999999999999987532110             00 00000    11


Q ss_pred             HHHHHHHHhCCCccEEEEcCCCHH------HHHHHHHHcccCCEEEEEcC-CCCCccc--cchhhhccceEEEEeeh
Q 020768          243 EVEKIQKAMGTGIDVSFDCAGFNK------TMSTALSATRAGGKVCLVGM-GHLEMTV--PLTPAAARYLIYSFLFH  310 (321)
Q Consensus       243 ~~~~~~~~~~~~~d~vid~~g~~~------~~~~~~~~l~~~G~~v~~g~-~~~~~~~--~~~~~~~k~~~i~g~~~  310 (321)
                      .+.+.    -.+.|+||.|+..+.      .-+..++.+++++.++.++. .++..+.  +-..+..+++++.|..+
T Consensus       268 ~l~e~----l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~t~~~~~~~~~GV~~~gv~n  340 (405)
T 4dio_A          268 LVAEH----IAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGGNIEGAEAGKVTEVGGVRIVGHLN  340 (405)
T ss_dssp             HHHHH----HHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTTCCTTEEEEETTEEEEECSS
T ss_pred             HHHHH----hcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCCCCccccCCCCeEEECCEEEEEeCC
Confidence            22222    246899999964321      23588899999999999985 3343332  11225568999998765

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=98.19  E-value=4.1e-07  Score=79.36  Aligned_cols=159  Identities=19%  Similarity=0.183  Sum_probs=95.8

Q ss_pred             CCccccCCCCC-----CCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhc--------cchhhHHHHHH-HHH
Q 020768          111 RCDHCKGGRYN-----LCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA--------MCEPLSVGLHA-CRR  176 (321)
Q Consensus       111 ~~~~~~~~~~~-----~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa--------~~~~~~~a~~~-l~~  176 (321)
                      .|+.|..+...     .|.+...++.  ..++|.++..++..... .|........+        ...++...+.. +..
T Consensus         4 ~Cp~C~~~~~~~~~~~~C~~~~~~~~--~~~Gy~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (269)
T 1p91_A            4 SCPLCHQPLSREKNSYICPQRHQFDM--AKEGYVNLLPVQHKRSR-DPGDSAEMMQARRAFLDAGHYQPLRDAIVAQLRE   80 (269)
T ss_dssp             BCTTTCCBCEEETTEEECTTCCEEEB--CTTSCEECSCSSSSCSC-CCSSSHHHHHHHHHHHTTTTTHHHHHHHHHHHHH
T ss_pred             cCCCCCccceeCCCEEECCCCCcCCc--CCCEEEEeecccccCCC-CCCCCHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence            58889888766     7887655443  23446665544332211 12221101101        11122111111 111


Q ss_pred             cCCCCCCEEEEEcCChhHHHHHHHHHHc-CCCeEEEEeCChhHHHHHHHcCCCe-EEecCCCcccHHHHHHHHHHHhCCC
Q 020768          177 ANIGPETNVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKELGADN-IVKVSTNLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~-g~~~vv~v~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~~~~~~~~~~~~~  254 (321)
                      .-..++.+||.+|+|. |..+..+++.. +. .+++++.+++..+.+++.+... ++..+.  .++.        .....
T Consensus        81 ~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~--~~~~--------~~~~~  148 (269)
T 1p91_A           81 RLDDKATAVLDIGCGE-GYYTHAFADALPEI-TTFGLDVSKVAIKAAAKRYPQVTFCVASS--HRLP--------FSDTS  148 (269)
T ss_dssp             HSCTTCCEEEEETCTT-STTHHHHHHTCTTS-EEEEEESCHHHHHHHHHHCTTSEEEECCT--TSCS--------BCTTC
T ss_pred             hcCCCCCEEEEECCCC-CHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHhCCCcEEEEcch--hhCC--------CCCCc
Confidence            1126789999999988 99999999986 55 7999999999999998866432 222111  1110        01356


Q ss_pred             ccEEEEcCCCHHHHHHHHHHcccCCEEEEEc
Q 020768          255 IDVSFDCAGFNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       255 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      +|+|+... ....+..+.+.|+++|++++..
T Consensus       149 fD~v~~~~-~~~~l~~~~~~L~pgG~l~~~~  178 (269)
T 1p91_A          149 MDAIIRIY-APCKAEELARVVKPGGWVITAT  178 (269)
T ss_dssp             EEEEEEES-CCCCHHHHHHHEEEEEEEEEEE
T ss_pred             eeEEEEeC-ChhhHHHHHHhcCCCcEEEEEE
Confidence            99999644 4568899999999999998875

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=98.12  E-value=1e-05  Score=73.67  Aligned_cols=127  Identities=17%  Similarity=0.199  Sum_probs=85.8

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecC---CCc--------cc-HHHHHHHHH
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS---TNL--------QD-IAEEVEKIQ  248 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~---~~~--------~~-~~~~~~~~~  248 (321)
                      ++.+|+|+|+|.+|+.+++.++.+|+ .|++.+.+.++.+.++++|++.+. .+   ...        ++ .......+.
T Consensus       183 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~lGa~~~~-l~~~~~~~~gya~~~~~~~~~~~~~~l~  260 (381)
T 3p2y_A          183 KPASALVLGVGVAGLQALATAKRLGA-KTTGYDVRPEVAEQVRSVGAQWLD-LGIDAAGEGGYARELSEAERAQQQQALE  260 (381)
T ss_dssp             CCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSGGGHHHHHHTTCEECC-CC-------------CHHHHHHHHHHHH
T ss_pred             CCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEe-ccccccccccchhhhhHHHHhhhHHHHH
Confidence            67899999999999999999999999 799999999999999999875331 10   000        00 111111221


Q ss_pred             HHhCCCccEEEEcCCCH-----H-HHHHHHHHcccCCEEEEEcCCC-CCccc--cchhhhccceEEEEeeh
Q 020768          249 KAMGTGIDVSFDCAGFN-----K-TMSTALSATRAGGKVCLVGMGH-LEMTV--PLTPAAARYLIYSFLFH  310 (321)
Q Consensus       249 ~~~~~~~d~vid~~g~~-----~-~~~~~~~~l~~~G~~v~~g~~~-~~~~~--~~~~~~~k~~~i~g~~~  310 (321)
                      +. -...|+||.++..+     . .-...++.+++++.++.++... +..+.  +-..+..+++++.|..+
T Consensus       261 e~-l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~e~t~~~~~~~~~gV~~~~v~n  330 (381)
T 3p2y_A          261 DA-ITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGGNCELTEPGRTIVHHGVTITSPLN  330 (381)
T ss_dssp             HH-HTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTCEEEETTEEEECCSC
T ss_pred             HH-HhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCCccccccCCCeEEECCEEEEeeCC
Confidence            11 25799999986332     1 2368889999999999998543 32221  11225567888877543

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=98.08  E-value=1.8e-05  Score=69.22  Aligned_cols=105  Identities=22%  Similarity=0.228  Sum_probs=74.4

Q ss_pred             HHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHHHHc-----C--CCeEEecCCCcccHHHHH
Q 020768          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKEL-----G--ADNIVKVSTNLQDIAEEV  244 (321)
Q Consensus       173 ~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~~~~-----g--~~~vi~~~~~~~~~~~~~  244 (321)
                      .+....++++++||-+|+| .|..+..+++..+ ...+++++.+++..+.+++.     |  .+.+.....+   ..+. 
T Consensus        91 i~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d---~~~~-  165 (280)
T 1i9g_A           91 IVHEGDIFPGARVLEAGAG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSD---LADS-  165 (280)
T ss_dssp             HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSC---GGGC-
T ss_pred             HHHHcCCCCCCEEEEEccc-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECc---hHhc-
Confidence            4466788999999999998 6888889998753 34799999999888877653     4  3322221111   1110 


Q ss_pred             HHHHHHhCCCccEEEEcCCCH-HHHHHHHHHcccCCEEEEEcC
Q 020768          245 EKIQKAMGTGIDVSFDCAGFN-KTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       245 ~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~  286 (321)
                          ......+|+|+.....+ ..+..+.+.|+++|+++++..
T Consensus       166 ----~~~~~~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  204 (280)
T 1i9g_A          166 ----ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVA  204 (280)
T ss_dssp             ----CCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred             ----CCCCCceeEEEECCcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence                00135699999877665 678899999999999988764

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=98.04  E-value=7.4e-05  Score=68.87  Aligned_cols=109  Identities=17%  Similarity=0.299  Sum_probs=81.1

Q ss_pred             HHHHHH--cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHH
Q 020768          171 LHACRR--ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQ  248 (321)
Q Consensus       171 ~~~l~~--~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~  248 (321)
                      +.++.+  ...-.|++++|+|.|.+|..+++.++.+|+ +|++++.++.+...+...|... .       +    +.++ 
T Consensus       207 ~~gi~rat~~~L~GktV~ViG~G~IGk~vA~~Lra~Ga-~Viv~D~dp~ra~~A~~~G~~v-~-------~----Leea-  272 (435)
T 3gvp_A          207 LDGLKRTTDMMFGGKQVVVCGYGEVGKGCCAALKAMGS-IVYVTEIDPICALQACMDGFRL-V-------K----LNEV-  272 (435)
T ss_dssp             HHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE-C-------C----HHHH-
T ss_pred             HHHHHHhhCceecCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCChhhhHHHHHcCCEe-c-------c----HHHH-
Confidence            445543  235689999999999999999999999999 6999999888777777777532 1       1    1222 


Q ss_pred             HHhCCCccEEEEcCCCHHHHH-HHHHHcccCCEEEEEcCCCCCccccchhh
Q 020768          249 KAMGTGIDVSFDCAGFNKTMS-TALSATRAGGKVCLVGMGHLEMTVPLTPA  298 (321)
Q Consensus       249 ~~~~~~~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~  298 (321)
                         -...|+++.|.|+...+. ..+..+++++.++.+|....  ++++..+
T Consensus       273 ---l~~ADIVi~atgt~~lI~~e~l~~MK~gailINvgrg~~--EId~~~L  318 (435)
T 3gvp_A          273 ---IRQVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHSNT--EIDVASL  318 (435)
T ss_dssp             ---TTTCSEEEECSSCSCSBCHHHHHHSCTTEEEEECSSTTT--TBTGGGG
T ss_pred             ---HhcCCEEEECCCCcccCCHHHHHhcCCCcEEEEecCCCc--cCCHHHH
Confidence               246899999988766665 88899999999999985543  4444433

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.99  E-value=2.1e-05  Score=62.58  Aligned_cols=100  Identities=17%  Similarity=0.181  Sum_probs=68.5

Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-HcCCCeEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      ...++++|+|+|+|.+|...++.++..|. .|+++++++++.+.++ +.|... +..+.  .+ .+.+.+   ....++|
T Consensus        15 ~~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~g~~~-~~~d~--~~-~~~l~~---~~~~~ad   86 (155)
T 2g1u_A           15 KKQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNSEFSGFT-VVGDA--AE-FETLKE---CGMEKAD   86 (155)
T ss_dssp             --CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCTTCCSEE-EESCT--TS-HHHHHT---TTGGGCS
T ss_pred             cccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHhcCCCcE-EEecC--CC-HHHHHH---cCcccCC
Confidence            34678899999999999999999999998 7889999998887776 566543 32211  12 122221   1234689


Q ss_pred             EEEEcCCCHHHHHHHHHHccc-CCEEEEEc
Q 020768          257 VSFDCAGFNKTMSTALSATRA-GGKVCLVG  285 (321)
Q Consensus       257 ~vid~~g~~~~~~~~~~~l~~-~G~~v~~g  285 (321)
                      +||.+++.+.....+...++. ++....+.
T Consensus        87 ~Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~  116 (155)
T 2g1u_A           87 MVFAFTNDDSTNFFISMNARYMFNVENVIA  116 (155)
T ss_dssp             EEEECSSCHHHHHHHHHHHHHTSCCSEEEE
T ss_pred             EEEEEeCCcHHHHHHHHHHHHHCCCCeEEE
Confidence            999999997766666666665 55433444

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.98  E-value=6.1e-05  Score=56.40  Aligned_cols=97  Identities=24%  Similarity=0.245  Sum_probs=65.3

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      .+.+|+|+|+|.+|..+++.+...|...|+++++++++.+.+...+...+. .+-.  + .+.+.+.    -.++|+||+
T Consensus         4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~-~d~~--~-~~~~~~~----~~~~d~vi~   75 (118)
T 3ic5_A            4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQ-VDAK--D-EAGLAKA----LGGFDAVIS   75 (118)
T ss_dssp             TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEE-CCTT--C-HHHHHHH----TTTCSEEEE
T ss_pred             CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEE-ecCC--C-HHHHHHH----HcCCCEEEE
Confidence            456899999999999999999999933788999999988887766654332 2211  2 1233332    247999999


Q ss_pred             cCCCHHHHHHHHHHcccCCEEEEEc
Q 020768          261 CAGFNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      +++..........+...+-.++.++
T Consensus        76 ~~~~~~~~~~~~~~~~~g~~~~~~~  100 (118)
T 3ic5_A           76 AAPFFLTPIIAKAAKAAGAHYFDLT  100 (118)
T ss_dssp             CSCGGGHHHHHHHHHHTTCEEECCC
T ss_pred             CCCchhhHHHHHHHHHhCCCEEEec
Confidence            9986544444444455555555443

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.94  E-value=8.3e-05  Score=65.74  Aligned_cols=111  Identities=15%  Similarity=0.127  Sum_probs=80.4

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      -.|++|+|+|+|.+|..+++.++.+|+ .|++.+++.++.+.++++|+.. ++.    .+    +.++    -...|+|+
T Consensus       153 l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~-~~~----~~----l~~~----l~~aDvVi  218 (293)
T 3d4o_A          153 IHGANVAVLGLGRVGMSVARKFAALGA-KVKVGARESDLLARIAEMGMEP-FHI----SK----AAQE----LRDVDVCI  218 (293)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTSEE-EEG----GG----HHHH----TTTCSEEE
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCCee-cCh----hh----HHHH----hcCCCEEE
Confidence            468999999999999999999999999 7999999988877777788653 221    12    2222    24689999


Q ss_pred             EcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEE
Q 020768          260 DCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYS  306 (321)
Q Consensus       260 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~  306 (321)
                      .+++..-.-...+..+++++.++.++.......+  .....+++.+.
T Consensus       219 ~~~p~~~i~~~~l~~mk~~~~lin~ar~~~~~~~--~~a~~~Gv~~~  263 (293)
T 3d4o_A          219 NTIPALVVTANVLAEMPSHTFVIDLASKPGGTDF--RYAEKRGIKAL  263 (293)
T ss_dssp             ECCSSCCBCHHHHHHSCTTCEEEECSSTTCSBCH--HHHHHHTCEEE
T ss_pred             ECCChHHhCHHHHHhcCCCCEEEEecCCCCCCCH--HHHHHCCCEEE
Confidence            9998532224567889999999999864333333  44445566664

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=97.90  E-value=2e-05  Score=67.84  Aligned_cols=103  Identities=22%  Similarity=0.240  Sum_probs=74.8

Q ss_pred             HHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHHHHc----CCCe-EEecCCCcccHHHHHHH
Q 020768          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKEL----GADN-IVKVSTNLQDIAEEVEK  246 (321)
Q Consensus       173 ~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~~~~----g~~~-vi~~~~~~~~~~~~~~~  246 (321)
                      .+....++++++||-.|+|. |..+..+++..+ ...+++++.+++..+.+++.    |... +.....   |+.+.   
T Consensus        85 i~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~---d~~~~---  157 (255)
T 3mb5_A           85 IVAYAGISPGDFIVEAGVGS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLK---DIYEG---  157 (255)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECS---CGGGC---
T ss_pred             HHHhhCCCCCCEEEEecCCc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEEC---chhhc---
Confidence            44667889999999999976 888889998853 44899999999888877653    5443 222211   11111   


Q ss_pred             HHHHhCCCccEEEEcCCCH-HHHHHHHHHcccCCEEEEEc
Q 020768          247 IQKAMGTGIDVSFDCAGFN-KTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       247 ~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g  285 (321)
                         .....+|+|+.....+ ..++.+.+.|+++|+++++.
T Consensus       158 ---~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  194 (255)
T 3mb5_A          158 ---IEEENVDHVILDLPQPERVVEHAAKALKPGGFFVAYT  194 (255)
T ss_dssp             ---CCCCSEEEEEECSSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             ---cCCCCcCEEEECCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence               1135699999887765 37889999999999999876

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=97.87  E-value=4.1e-05  Score=68.98  Aligned_cols=107  Identities=20%  Similarity=0.248  Sum_probs=70.1

Q ss_pred             HHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHHHcC---------------CCeEEecCCC
Q 020768          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKELG---------------ADNIVKVSTN  236 (321)
Q Consensus       173 ~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~~~g---------------~~~vi~~~~~  236 (321)
                      .++...+++|++||-+|+|. |..++.+++..|. ..+++++.+++..+.+++..               .+.+.....+
T Consensus        97 ~l~~l~~~~g~~VLDiG~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d  175 (336)
T 2b25_A           97 ILSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD  175 (336)
T ss_dssp             HHHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC
T ss_pred             HHHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECC
Confidence            44556789999999999977 8888888888764 47999999998888776521               1222111111


Q ss_pred             cccHHHHHHHHHHHhCCCccEEEEcCCCH-HHHHHHHHHcccCCEEEEEcC
Q 020768          237 LQDIAEEVEKIQKAMGTGIDVSFDCAGFN-KTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      ..+.   ...+.   ...+|+|+-....+ ..+..+.+.|+++|+++++..
T Consensus       176 ~~~~---~~~~~---~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  220 (336)
T 2b25_A          176 ISGA---TEDIK---SLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVV  220 (336)
T ss_dssp             TTCC---C----------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred             hHHc---ccccC---CCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence            1111   00111   24599999765554 357889999999999997763

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.81  E-value=0.00021  Score=63.28  Aligned_cols=112  Identities=14%  Similarity=0.100  Sum_probs=80.4

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      -.|.+++|+|+|.+|..+++.++.+|+ .|++.+++.++.+.+.++|+. .+..    .+    +.++    -...|+|+
T Consensus       155 l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~-~~~~----~~----l~~~----l~~aDvVi  220 (300)
T 2rir_A          155 IHGSQVAVLGLGRTGMTIARTFAALGA-NVKVGARSSAHLARITEMGLV-PFHT----DE----LKEH----VKDIDICI  220 (300)
T ss_dssp             STTSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCE-EEEG----GG----HHHH----STTCSEEE
T ss_pred             CCCCEEEEEcccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCe-EEch----hh----HHHH----hhCCCEEE
Confidence            468899999999999999999999999 799999998887777777764 2221    12    2222    24689999


Q ss_pred             EcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEE
Q 020768          260 DCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSF  307 (321)
Q Consensus       260 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g  307 (321)
                      .+++..-.-...+..+++++.++.++.......+  .....+++.+..
T Consensus       221 ~~~p~~~i~~~~~~~mk~g~~lin~a~g~~~~~~--~~a~~~G~~~i~  266 (300)
T 2rir_A          221 NTIPSMILNQTVLSSMTPKTLILDLASRPGGTDF--KYAEKQGIKALL  266 (300)
T ss_dssp             ECCSSCCBCHHHHTTSCTTCEEEECSSTTCSBCH--HHHHHHTCEEEE
T ss_pred             ECCChhhhCHHHHHhCCCCCEEEEEeCCCCCcCH--HHHHHCCCEEEE
Confidence            9998632224567889999999999864333334  334456666553

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=97.76  E-value=4.9e-05  Score=70.25  Aligned_cols=113  Identities=19%  Similarity=0.252  Sum_probs=86.8

Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccE
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      ..-.|.+|+|+|.|.+|..+++.++.+|+ +|++++.++.+...+...|....        +    +.++    -...|+
T Consensus       207 ~~L~GktVgIiG~G~IG~~vA~~Lka~Ga-~Viv~D~~p~~a~~A~~~G~~~~--------s----L~ea----l~~ADV  269 (436)
T 3h9u_A          207 VMIAGKTACVCGYGDVGKGCAAALRGFGA-RVVVTEVDPINALQAAMEGYQVL--------L----VEDV----VEEAHI  269 (436)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC--------C----HHHH----TTTCSE
T ss_pred             CcccCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCChhhhHHHHHhCCeec--------C----HHHH----HhhCCE
Confidence            33478999999999999999999999999 79999999888777777776321        1    2222    246899


Q ss_pred             EEEcCCCHHHHH-HHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEee
Q 020768          258 SFDCAGFNKTMS-TALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLF  309 (321)
Q Consensus       258 vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~  309 (321)
                      ++.+.++...+. ..+..++++..++.+|  .+..++|...+..+..+..++.
T Consensus       270 Vilt~gt~~iI~~e~l~~MK~gAIVINvg--Rg~vEID~~~L~~~~~~~~~ir  320 (436)
T 3h9u_A          270 FVTTTGNDDIITSEHFPRMRDDAIVCNIG--HFDTEIQVAWLKANAKERVEVK  320 (436)
T ss_dssp             EEECSSCSCSBCTTTGGGCCTTEEEEECS--SSGGGBCHHHHHHHCSEEEEEE
T ss_pred             EEECCCCcCccCHHHHhhcCCCcEEEEeC--CCCCccCHHHHHhhcCceEeec
Confidence            999988755544 6678899999988888  4566788888877666666655

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.75  E-value=8.3e-05  Score=69.74  Aligned_cols=92  Identities=15%  Similarity=0.263  Sum_probs=73.0

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      -.|++++|+|+|++|..+++.++..|+ +|++++.++++.+.+...|++ +.+.+           +    .-..+|+++
T Consensus       263 L~GKtVvVtGaGgIG~aiA~~Laa~GA-~Viv~D~~~~~a~~Aa~~g~d-v~~le-----------e----~~~~aDvVi  325 (488)
T 3ond_A          263 IAGKVAVVAGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQATMEGLQ-VLTLE-----------D----VVSEADIFV  325 (488)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-ECCGG-----------G----TTTTCSEEE
T ss_pred             ccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHhCCc-cCCHH-----------H----HHHhcCEEE
Confidence            479999999999999999999999999 788999998888777777753 21111           1    124689999


Q ss_pred             EcCCCHHHHH-HHHHHcccCCEEEEEcCCC
Q 020768          260 DCAGFNKTMS-TALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       260 d~~g~~~~~~-~~~~~l~~~G~~v~~g~~~  288 (321)
                      ++.|....+. ..+..+++++.++.+|...
T Consensus       326 ~atG~~~vl~~e~l~~mk~gaiVvNaG~~~  355 (488)
T 3ond_A          326 TTTGNKDIIMLDHMKKMKNNAIVCNIGHFD  355 (488)
T ss_dssp             ECSSCSCSBCHHHHTTSCTTEEEEESSSTT
T ss_pred             eCCCChhhhhHHHHHhcCCCeEEEEcCCCC
Confidence            9999766554 4788999999999998653

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.74  E-value=0.00013  Score=67.50  Aligned_cols=102  Identities=15%  Similarity=0.160  Sum_probs=76.5

Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccE
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      ..-.|++++|+|.|.+|..+++.++.+|+ +|++++.++.+...+...|... .+       +.    ++    -...|+
T Consensus       243 ~~L~GKTVgVIG~G~IGr~vA~~lrafGa-~Viv~d~dp~~a~~A~~~G~~v-v~-------Le----El----L~~ADI  305 (464)
T 3n58_A          243 VMMAGKVAVVCGYGDVGKGSAQSLAGAGA-RVKVTEVDPICALQAAMDGFEV-VT-------LD----DA----ASTADI  305 (464)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEE-CC-------HH----HH----GGGCSE
T ss_pred             CcccCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCcchhhHHHhcCcee-cc-------HH----HH----HhhCCE
Confidence            45689999999999999999999999999 7999988887766666667532 11       11    22    135899


Q ss_pred             EEEcCCCHHHH-HHHHHHcccCCEEEEEcCCCCCccccchhh
Q 020768          258 SFDCAGFNKTM-STALSATRAGGKVCLVGMGHLEMTVPLTPA  298 (321)
Q Consensus       258 vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~  298 (321)
                      ++.+.|+...+ ...+..+++++.++.+|-..  .++|...+
T Consensus       306 Vv~atgt~~lI~~e~l~~MK~GAILINvGRgd--vEID~~aL  345 (464)
T 3n58_A          306 VVTTTGNKDVITIDHMRKMKDMCIVGNIGHFD--NEIQVAAL  345 (464)
T ss_dssp             EEECCSSSSSBCHHHHHHSCTTEEEEECSSST--TTBTCGGG
T ss_pred             EEECCCCccccCHHHHhcCCCCeEEEEcCCCC--cccCHHHH
Confidence            99999875554 57889999999999998443  34554444

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=97.71  E-value=0.00037  Score=60.86  Aligned_cols=107  Identities=29%  Similarity=0.351  Sum_probs=75.6

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH-HHHcCCCeE-EecCC-CcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGADNI-VKVST-NLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~-~~~~g~~~v-i~~~~-~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .|+++||+|+ +++|...++.+...|+ .|+++++++++.+. ++++|.... +..+- +..+..+.+.+..+. .+++|
T Consensus        28 ~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~-~G~iD  105 (273)
T 4fgs_A           28 NAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAE-AGRID  105 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHH-HSCEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHH-cCCCC
Confidence            5889999998 9999999999999999 68888999887764 456775432 22221 223333344444333 35799


Q ss_pred             EEEEcCCCHH-------------------------HHHHHHHHcccCCEEEEEcCCCC
Q 020768          257 VSFDCAGFNK-------------------------TMSTALSATRAGGKVCLVGMGHL  289 (321)
Q Consensus       257 ~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~~  289 (321)
                      +++++.|...                         ..+.++..++.+|+++.+++..+
T Consensus       106 iLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~  163 (273)
T 4fgs_A          106 VLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAG  163 (273)
T ss_dssp             EEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGG
T ss_pred             EEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhh
Confidence            9999998631                         35566778889999999986433

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.70  E-value=0.00053  Score=55.82  Aligned_cols=96  Identities=19%  Similarity=0.225  Sum_probs=67.6

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHc-CCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHH-hCCCccEEE
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA-MGTGIDVSF  259 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~-g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~-~~~~~d~vi  259 (321)
                      +++|+|+|+|.+|...++.++.. |. .|++++.++++.+.+++.|...+.- +..  + .+.+.   +. .-.++|++|
T Consensus        39 ~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~~g~~~~~g-d~~--~-~~~l~---~~~~~~~ad~vi  110 (183)
T 3c85_A           39 HAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRSEGRNVISG-DAT--D-PDFWE---RILDTGHVKLVL  110 (183)
T ss_dssp             TCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHHTTCCEEEC-CTT--C-HHHHH---TBCSCCCCCEEE
T ss_pred             CCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHHCCCCEEEc-CCC--C-HHHHH---hccCCCCCCEEE
Confidence            67899999999999999999998 98 6889999999999888888764431 111  1 11222   12 235799999


Q ss_pred             EcCCCHHHHHHHHHHc---ccCCEEEEEc
Q 020768          260 DCAGFNKTMSTALSAT---RAGGKVCLVG  285 (321)
Q Consensus       260 d~~g~~~~~~~~~~~l---~~~G~~v~~g  285 (321)
                      .+++++.....+...+   .+..+++...
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~~~ii~~~  139 (183)
T 3c85_A          111 LAMPHHQGNQTALEQLQRRNYKGQIAAIA  139 (183)
T ss_dssp             ECCSSHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred             EeCCChHHHHHHHHHHHHHCCCCEEEEEE
Confidence            9999865544444444   4455666543

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.66  E-value=0.00057  Score=56.85  Aligned_cols=104  Identities=13%  Similarity=0.097  Sum_probs=73.5

Q ss_pred             HHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCC-eEEecCCCcccHHHHHHHH
Q 020768          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGAD-NIVKVSTNLQDIAEEVEKI  247 (321)
Q Consensus       173 ~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~-~vi~~~~~~~~~~~~~~~~  247 (321)
                      .+....++++++||-+|+|. |..++.+++. +. .|++++.+++..+.+++    +|.. .+-....+..+   .+.  
T Consensus        47 ~l~~l~~~~~~~vLDlGcG~-G~~~~~la~~-~~-~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~---~~~--  118 (204)
T 3njr_A           47 TLAALAPRRGELLWDIGGGS-GSVSVEWCLA-GG-RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPA---ALA--  118 (204)
T ss_dssp             HHHHHCCCTTCEEEEETCTT-CHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTG---GGT--
T ss_pred             HHHhcCCCCCCEEEEecCCC-CHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhh---hcc--
Confidence            45667889999999999976 8888888888 66 79999999998887654    4554 22221111111   111  


Q ss_pred             HHHhCCCccEEEEcCCCH-HHHHHHHHHcccCCEEEEEcCC
Q 020768          248 QKAMGTGIDVSFDCAGFN-KTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       248 ~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                         ....+|+|+...+.. ..++.+.+.|+++|++++....
T Consensus       119 ---~~~~~D~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~  156 (204)
T 3njr_A          119 ---DLPLPEAVFIGGGGSQALYDRLWEWLAPGTRIVANAVT  156 (204)
T ss_dssp             ---TSCCCSEEEECSCCCHHHHHHHHHHSCTTCEEEEEECS
T ss_pred             ---cCCCCCEEEECCcccHHHHHHHHHhcCCCcEEEEEecC
Confidence               124699999765542 3788999999999999987754

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.58  E-value=0.001  Score=57.46  Aligned_cols=107  Identities=17%  Similarity=0.193  Sum_probs=67.2

Q ss_pred             CCCEEEEEcC-Ch--hHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCC--CeEEecCC-CcccHHHHHHHHHHH
Q 020768          181 PETNVLIMGA-GP--IGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGA--DNIVKVST-NLQDIAEEVEKIQKA  250 (321)
Q Consensus       181 ~g~~vlI~Ga-g~--vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~--~~vi~~~~-~~~~~~~~~~~~~~~  250 (321)
                      .|+++||+|+ |.  +|...++.+...|+ .|++++++++..+.++    +++.  -..+..+- +..+..+.+.++.+.
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ   84 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence            4789999988 66  99999988888999 5777777765444333    3333  12222221 223444444444332


Q ss_pred             hCCCccEEEEcCCCHH-----------------------------HHHHHHHHcccCCEEEEEcCCCC
Q 020768          251 MGTGIDVSFDCAGFNK-----------------------------TMSTALSATRAGGKVCLVGMGHL  289 (321)
Q Consensus       251 ~~~~~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~~  289 (321)
                       .+++|+++.+.|...                             ..+.++..++++|+++.+++...
T Consensus        85 -~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~  151 (266)
T 3oig_A           85 -VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGG  151 (266)
T ss_dssp             -HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGG
T ss_pred             -hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccc
Confidence             347999999987421                             23445566677899999986433

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=97.58  E-value=0.00079  Score=55.67  Aligned_cols=106  Identities=14%  Similarity=0.186  Sum_probs=74.5

Q ss_pred             HHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHH
Q 020768          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQ  248 (321)
Q Consensus       173 ~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~  248 (321)
                      .+....++++++||-+|+|. |..++.+++......+++++.+++..+.+++    .+.+.+-....+   ..+.+.   
T Consensus        32 ~l~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d---~~~~~~---  104 (204)
T 3e05_A           32 TLSKLRLQDDLVMWDIGAGS-ASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAF---APEGLD---  104 (204)
T ss_dssp             HHHHTTCCTTCEEEEETCTT-CHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECC---TTTTCT---
T ss_pred             HHHHcCCCCCCEEEEECCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCC---hhhhhh---
Confidence            35667889999999999975 8888999998644589999999998887764    344322211111   111110   


Q ss_pred             HHhCCCccEEEEcCC---CHHHHHHHHHHcccCCEEEEEcCC
Q 020768          249 KAMGTGIDVSFDCAG---FNKTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       249 ~~~~~~~d~vid~~g---~~~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                        ....+|+|+....   -...++.+.+.|+++|++++....
T Consensus       105 --~~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~  144 (204)
T 3e05_A          105 --DLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAVT  144 (204)
T ss_dssp             --TSCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred             --cCCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEecc
Confidence              1256999998755   246788999999999999987643

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=97.55  E-value=0.00071  Score=58.29  Aligned_cols=107  Identities=18%  Similarity=0.246  Sum_probs=70.1

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCe-EEecCCC-cccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADN-IVKVSTN-LQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .|+++||+|+ +++|...++.+...|+ .|+++++++++.+.+ ++++... .+..+-. ..+..+.+.++.+. .+++|
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~id   84 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQT-LGAID   84 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHH-HSSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHH-hCCCC
Confidence            5789999998 9999999999999999 688888888776654 3455332 2222211 22333333333332 35799


Q ss_pred             EEEEcCCCH----------H---------------HHHHHHHHcccCCEEEEEcCCCC
Q 020768          257 VSFDCAGFN----------K---------------TMSTALSATRAGGKVCLVGMGHL  289 (321)
Q Consensus       257 ~vid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~~~  289 (321)
                      +++++.|..          +               ..+.++..++.+|+++.+++...
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~  142 (255)
T 4eso_A           85 LLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVAD  142 (255)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGG
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhh
Confidence            999998742          1               23444556667899999986543

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.55  E-value=0.0017  Score=50.44  Aligned_cols=97  Identities=12%  Similarity=0.062  Sum_probs=68.5

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      -.++|+|.|+|.+|...++.++..|. .|++++.++++.+.+++.|...+. -+..+   .+.+.+   .+-..+|+++-
T Consensus         6 ~~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~~g~~~i~-gd~~~---~~~l~~---a~i~~ad~vi~   77 (140)
T 3fwz_A            6 ICNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRERGVRAVL-GNAAN---EEIMQL---AHLECAKWLIL   77 (140)
T ss_dssp             CCSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEE-SCTTS---HHHHHH---TTGGGCSEEEE
T ss_pred             CCCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHcCCCEEE-CCCCC---HHHHHh---cCcccCCEEEE
Confidence            35789999999999999999999999 699999999999999888875433 22222   122222   22356899999


Q ss_pred             cCCCHHHHH---HHHHHcccCCEEEEEc
Q 020768          261 CAGFNKTMS---TALSATRAGGKVCLVG  285 (321)
Q Consensus       261 ~~g~~~~~~---~~~~~l~~~G~~v~~g  285 (321)
                      +++++..-.   ...+.+.++.+++...
T Consensus        78 ~~~~~~~n~~~~~~a~~~~~~~~iiar~  105 (140)
T 3fwz_A           78 TIPNGYEAGEIVASARAKNPDIEIIARA  105 (140)
T ss_dssp             CCSCHHHHHHHHHHHHHHCSSSEEEEEE
T ss_pred             ECCChHHHHHHHHHHHHHCCCCeEEEEE
Confidence            999864322   3345556677766554

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=97.46  E-value=0.0022  Score=56.43  Aligned_cols=107  Identities=21%  Similarity=0.173  Sum_probs=68.2

Q ss_pred             CCCCEEEEEcC-Ch--hHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCeEEecCCC-cccHHHHHHHHHHHh
Q 020768          180 GPETNVLIMGA-GP--IGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNIVKVSTN-LQDIAEEVEKIQKAM  251 (321)
Q Consensus       180 ~~g~~vlI~Ga-g~--vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~vi~~~~~-~~~~~~~~~~~~~~~  251 (321)
                      -.|+++||+|+ |+  +|...++.+...|+ .|++++++++..+.+    ++.+....+..+-. ..+..+.+.++.+. 
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-  106 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKK-  106 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHh-
Confidence            35789999988 66  99999998889999 577787775433332    33443223322222 22333334444332 


Q ss_pred             CCCccEEEEcCCCHH-----------------------------HHHHHHHHcccCCEEEEEcCCC
Q 020768          252 GTGIDVSFDCAGFNK-----------------------------TMSTALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       252 ~~~~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~  288 (321)
                      .+++|++|++.|...                             ..+.++..++.+|+++.+++..
T Consensus       107 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~  172 (293)
T 3grk_A          107 WGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYG  172 (293)
T ss_dssp             TSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGG
T ss_pred             cCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehh
Confidence            457999999988421                             2445566677789999998643

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=97.46  E-value=0.00026  Score=60.17  Aligned_cols=104  Identities=21%  Similarity=0.226  Sum_probs=73.0

Q ss_pred             HHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHH
Q 020768          172 HACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKI  247 (321)
Q Consensus       172 ~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~  247 (321)
                      ..++...++++++||-+|+| .|..+..+++..+ ..+++++.+++..+.+++    .|...+.....   +...   .+
T Consensus        82 ~~~~~l~~~~~~~vLdiG~G-~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~---d~~~---~~  153 (235)
T 1jg1_A           82 IMLEIANLKPGMNILEVGTG-SGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILG---DGSK---GF  153 (235)
T ss_dssp             HHHHHHTCCTTCCEEEECCT-TSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEES---CGGG---CC
T ss_pred             HHHHhcCCCCCCEEEEEeCC-cCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEC---Cccc---CC
Confidence            34455678899999999998 6899999999887 479999999988777764    45433221111   1100   01


Q ss_pred             HHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEc
Q 020768          248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       248 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                        ....++|+|+.+..-......+.+.|+++|++++.-
T Consensus       154 --~~~~~fD~Ii~~~~~~~~~~~~~~~L~pgG~lvi~~  189 (235)
T 1jg1_A          154 --PPKAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIPV  189 (235)
T ss_dssp             --GGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             --CCCCCccEEEECCcHHHHHHHHHHhcCCCcEEEEEE
Confidence              012459999987765556678899999999987764

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=97.45  E-value=0.00068  Score=58.10  Aligned_cols=106  Identities=18%  Similarity=0.098  Sum_probs=76.1

Q ss_pred             HHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHHHHc-----CCCeEEecCCCcccHHHHHHH
Q 020768          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKEL-----GADNIVKVSTNLQDIAEEVEK  246 (321)
Q Consensus       173 ~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~~~~-----g~~~vi~~~~~~~~~~~~~~~  246 (321)
                      .++...++++++||-.|+|. |..+..+++..+ ...+++++.+++..+.+++.     |.+.+.....   +..+.  .
T Consensus        88 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~---d~~~~--~  161 (258)
T 2pwy_A           88 MVTLLDLAPGMRVLEAGTGS-GGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLG---KLEEA--E  161 (258)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEES---CGGGC--C
T ss_pred             HHHHcCCCCCCEEEEECCCc-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEEC---chhhc--C
Confidence            45667889999999999985 888899999864 34899999999988887754     6333222111   11110  0


Q ss_pred             HHHHhCCCccEEEEcCCCH-HHHHHHHHHcccCCEEEEEcCC
Q 020768          247 IQKAMGTGIDVSFDCAGFN-KTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       247 ~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                         .....+|+|+...... ..+..+.+.|+++|+++++...
T Consensus       162 ---~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~  200 (258)
T 2pwy_A          162 ---LEEAAYDGVALDLMEPWKVLEKAALALKPDRFLVAYLPN  200 (258)
T ss_dssp             ---CCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEESC
T ss_pred             ---CCCCCcCEEEECCcCHHHHHHHHHHhCCCCCEEEEEeCC
Confidence               0124699999877765 6788999999999999988743

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=97.45  E-value=0.00069  Score=54.42  Aligned_cols=105  Identities=17%  Similarity=0.246  Sum_probs=73.8

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCC-eEEecCCCcccHHHHHHHHH
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGAD-NIVKVSTNLQDIAEEVEKIQ  248 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~-~vi~~~~~~~~~~~~~~~~~  248 (321)
                      ++...++++++||-+|+|. |..+..+++..+...+++++.+++..+.+++    .+.. .+ ....+..+   .+.   
T Consensus        18 ~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~---~~~---   89 (178)
T 3hm2_A           18 ISALAPKPHETLWDIGGGS-GSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPR---AFD---   89 (178)
T ss_dssp             HHHHCCCTTEEEEEESTTT-THHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTG---GGG---
T ss_pred             HHHhcccCCCeEEEeCCCC-CHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHh---hhh---
Confidence            4556788999999999976 8889999988754589999999988887764    3554 33 22221111   111   


Q ss_pred             HHhCCCccEEEEcCCCH--HHHHHHHHHcccCCEEEEEcCC
Q 020768          249 KAMGTGIDVSFDCAGFN--KTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       249 ~~~~~~~d~vid~~g~~--~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                       .....+|+|+....-.  ..++.+.+.|+++|++++....
T Consensus        90 -~~~~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~  129 (178)
T 3hm2_A           90 -DVPDNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVANAVT  129 (178)
T ss_dssp             -GCCSCCSEEEECC-TTCTTHHHHHHHTCCTTCEEEEEECS
T ss_pred             -ccCCCCCEEEECCcccHHHHHHHHHHhcCCCCEEEEEeec
Confidence             1126799999765432  4789999999999999987644

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=97.44  E-value=0.002  Score=54.72  Aligned_cols=81  Identities=17%  Similarity=0.257  Sum_probs=53.7

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-HcCCC-eEEecCC-CcccHHHHHHHHHHHhCCCccE
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      +.++||+|+ +++|...+..+...|+ .|++++++.++.+.+. +++.. ..+..+- +..+..+.+.++.+. .+++|+
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~g~id~   80 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGH-QVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEW-GGLPEL   80 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHH-HCSCSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHh-cCCCcE
Confidence            578999998 9999999998889999 6888888887766543 34322 1122221 223333344444332 357999


Q ss_pred             EEEcCCC
Q 020768          258 SFDCAGF  264 (321)
Q Consensus       258 vid~~g~  264 (321)
                      +|++.|.
T Consensus        81 lvnnAg~   87 (235)
T 3l6e_A           81 VLHCAGT   87 (235)
T ss_dssp             EEEECCC
T ss_pred             EEECCCC
Confidence            9999885

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=97.43  E-value=0.0032  Score=53.99  Aligned_cols=106  Identities=15%  Similarity=0.153  Sum_probs=69.9

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeE-EecCC-CcccHHHHHHHHHHHhCCCccEE
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI-VKVST-NLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-i~~~~-~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      +++|||+|+ +++|...++.+...|+ +|+.+++++++.+.+.+-+.... +..+- +..+..+.+.+..+. .+++|++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~-~g~iDiL   79 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEK-LQRIDVL   79 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHH-HSCCCEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHH-cCCCCEE
Confidence            368999998 9999999999999999 68889999888776665443322 22221 223333344444333 3579999


Q ss_pred             EEcCCCHH-------------------------HHHHHHHHc-ccCCEEEEEcCCCC
Q 020768          259 FDCAGFNK-------------------------TMSTALSAT-RAGGKVCLVGMGHL  289 (321)
Q Consensus       259 id~~g~~~-------------------------~~~~~~~~l-~~~G~~v~~g~~~~  289 (321)
                      ++++|...                         ..+.++..+ +.+|+++.+++..+
T Consensus        80 VNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~  136 (247)
T 3ged_A           80 VNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRA  136 (247)
T ss_dssp             EECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGG
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeeccc
Confidence            99987531                         123344444 56799999986543

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=97.42  E-value=0.0028  Score=54.55  Aligned_cols=107  Identities=16%  Similarity=0.207  Sum_probs=67.9

Q ss_pred             CCCEEEEEcC-C--hhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCe--EEecCC-CcccHHHHHHHHHHH
Q 020768          181 PETNVLIMGA-G--PIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN--IVKVST-NLQDIAEEVEKIQKA  250 (321)
Q Consensus       181 ~g~~vlI~Ga-g--~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~--vi~~~~-~~~~~~~~~~~~~~~  250 (321)
                      .|+++||+|+ |  ++|...++.+...|+ +|+.+++++++.+.+    ++++...  .+..+- +.++..+.+.+..+.
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKD   83 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4789999997 5  899999999999999 688888887665443    3344322  222221 223333344444332


Q ss_pred             hCCCccEEEEcCCCH--------------HH---------------HHHHHHHcccCCEEEEEcCCCC
Q 020768          251 MGTGIDVSFDCAGFN--------------KT---------------MSTALSATRAGGKVCLVGMGHL  289 (321)
Q Consensus       251 ~~~~~d~vid~~g~~--------------~~---------------~~~~~~~l~~~G~~v~~g~~~~  289 (321)
                       .+++|+++++.|..              +.               .+.....++.+|+++.+++..+
T Consensus        84 -~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~  150 (256)
T 4fs3_A           84 -VGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGG  150 (256)
T ss_dssp             -HCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGG
T ss_pred             -hCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecccc
Confidence             35799999998731              11               1233455678899999986543

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=97.39  E-value=0.0041  Score=53.24  Aligned_cols=106  Identities=14%  Similarity=0.238  Sum_probs=66.7

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-Hc----C-CCeEEecCC--C-cccHHHHHHHHHHH
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-EL----G-ADNIVKVST--N-LQDIAEEVEKIQKA  250 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~----g-~~~vi~~~~--~-~~~~~~~~~~~~~~  250 (321)
                      .|+++||+|+ +++|...++.+...|+ +|++++++.++.+.+. ++    + -...+..+-  . ..+..+.+.++.+ 
T Consensus        11 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   88 (252)
T 3f1l_A           11 NDRIILVTGASDGIGREAAMTYARYGA-TVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV-   88 (252)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH-
Confidence            5789999998 9999999999889999 6888888877655432 22    2 112222221  2 2233333344333 


Q ss_pred             hCCCccEEEEcCCCH-----------H---------------HHHHHHHHc--ccCCEEEEEcCCC
Q 020768          251 MGTGIDVSFDCAGFN-----------K---------------TMSTALSAT--RAGGKVCLVGMGH  288 (321)
Q Consensus       251 ~~~~~d~vid~~g~~-----------~---------------~~~~~~~~l--~~~G~~v~~g~~~  288 (321)
                      ..+++|++|++.|..           +               ..+.++..+  +.+|+++.+++..
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~  154 (252)
T 3f1l_A           89 NYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSV  154 (252)
T ss_dssp             HCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGG
T ss_pred             hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChh
Confidence            245799999999841           0               133444544  3468999998643

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=97.38  E-value=0.0024  Score=56.26  Aligned_cols=106  Identities=13%  Similarity=0.175  Sum_probs=67.9

Q ss_pred             CCCEEEEEcC-C--hhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCeEEecCCC-cccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-G--PIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNIVKVSTN-LQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g--~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~vi~~~~~-~~~~~~~~~~~~~~~~  252 (321)
                      .|+++||+|+ |  ++|...++.+...|+ .|++++++++..+.+    ++.+....+..+-. ..+..+.+.++.+. .
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~  106 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEE-W  106 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            4789999998 6  999999998888999 688888776543332    34454344433322 23333344444333 2


Q ss_pred             CCccEEEEcCCCHH-----------------------------HHHHHHHHcccCCEEEEEcCCC
Q 020768          253 TGIDVSFDCAGFNK-----------------------------TMSTALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       253 ~~~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~  288 (321)
                      +++|++|++.|...                             ..+.++..+..+|+++.+++..
T Consensus       107 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~  171 (296)
T 3k31_A          107 GSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYG  171 (296)
T ss_dssp             SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGG
T ss_pred             CCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehh
Confidence            57999999998421                             1334445566789999998643

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=97.36  E-value=0.00041  Score=59.40  Aligned_cols=105  Identities=18%  Similarity=0.259  Sum_probs=67.5

Q ss_pred             CCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccE
Q 020768          179 IGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       179 ~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      +-.|+++||+|+ +++|...++.+...|+ +|++++++.++.+....-.+. .+..+-.  + .+.++++.+. -+++|+
T Consensus         8 lf~GK~alVTGas~GIG~aia~~la~~Ga-~Vv~~~~~~~~~~~~~~~~~~-~~~~Dv~--~-~~~v~~~~~~-~g~iDi   81 (242)
T 4b79_A            8 IYAGQQVLVTGGSSGIGAAIAMQFAELGA-EVVALGLDADGVHAPRHPRIR-REELDIT--D-SQRLQRLFEA-LPRLDV   81 (242)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTSTTSCCCTTEE-EEECCTT--C-HHHHHHHHHH-CSCCSE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHhhhhcCCeE-EEEecCC--C-HHHHHHHHHh-cCCCCE
Confidence            346999999998 9999999999999999 688888887765432211111 1111111  1 2234444333 357999


Q ss_pred             EEEcCCCHH-----------------------HHHHHHHHcc-cCCEEEEEcCCCC
Q 020768          258 SFDCAGFNK-----------------------TMSTALSATR-AGGKVCLVGMGHL  289 (321)
Q Consensus       258 vid~~g~~~-----------------------~~~~~~~~l~-~~G~~v~~g~~~~  289 (321)
                      ++++.|-..                       ..+.++..++ .+|+++.+++..+
T Consensus        82 LVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~  137 (242)
T 4b79_A           82 LVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYS  137 (242)
T ss_dssp             EEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGG
T ss_pred             EEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccc
Confidence            999988531                       2344555664 5799999986543

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=97.36  E-value=0.00044  Score=57.42  Aligned_cols=102  Identities=18%  Similarity=0.137  Sum_probs=71.2

Q ss_pred             HHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHH
Q 020768          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQ  248 (321)
Q Consensus       173 ~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~  248 (321)
                      .++...++++++||-+|+|. |..+..+++. +. .+++++.+++..+.+++    .+...+.....   +..+..    
T Consensus        69 ~~~~l~~~~~~~vLdiG~G~-G~~~~~la~~-~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~---d~~~~~----  138 (210)
T 3lbf_A           69 MTELLELTPQSRVLEIGTGS-GYQTAILAHL-VQ-HVCSVERIKGLQWQARRRLKNLDLHNVSTRHG---DGWQGW----  138 (210)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHH-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEES---CGGGCC----
T ss_pred             HHHhcCCCCCCEEEEEcCCC-CHHHHHHHHh-CC-EEEEEecCHHHHHHHHHHHHHcCCCceEEEEC---CcccCC----
Confidence            35667889999999999974 8888888888 55 79999999988887764    35443221111   111100    


Q ss_pred             HHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEc
Q 020768          249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                       .....+|+|+....-....+.+.+.|+++|++++.-
T Consensus       139 -~~~~~~D~i~~~~~~~~~~~~~~~~L~pgG~lv~~~  174 (210)
T 3lbf_A          139 -QARAPFDAIIVTAAPPEIPTALMTQLDEGGILVLPV  174 (210)
T ss_dssp             -GGGCCEEEEEESSBCSSCCTHHHHTEEEEEEEEEEE
T ss_pred             -ccCCCccEEEEccchhhhhHHHHHhcccCcEEEEEE
Confidence             013579999997665555567899999999988764

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=97.34  E-value=0.0024  Score=55.06  Aligned_cols=107  Identities=22%  Similarity=0.315  Sum_probs=70.6

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH----HHHcCCCeEE-ecC-CCcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGADNIV-KVS-TNLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~----~~~~g~~~vi-~~~-~~~~~~~~~~~~~~~~~~~  253 (321)
                      .|+++||+|+ +++|...++.+...|+ +|+.+++++++.+.    +++.|.+... ..+ .+..+..+.+.+..+ ..+
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~-~~G   85 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDA-EGI   85 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHH-TTC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH-HCC
Confidence            5889999988 9999999999999999 68888888776543    3344544321 111 122333344444433 356


Q ss_pred             CccEEEEcCCCHH-------------------------HHHHHHHHc---ccCCEEEEEcCCCC
Q 020768          254 GIDVSFDCAGFNK-------------------------TMSTALSAT---RAGGKVCLVGMGHL  289 (321)
Q Consensus       254 ~~d~vid~~g~~~-------------------------~~~~~~~~l---~~~G~~v~~g~~~~  289 (321)
                      ++|+++++.|...                         ..+.++..+   ..+|+++.+++...
T Consensus        86 ~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~  149 (255)
T 4g81_D           86 HVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTS  149 (255)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhh
Confidence            7999999998531                         234556655   24689999986543

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=97.34  E-value=0.0022  Score=54.17  Aligned_cols=99  Identities=18%  Similarity=0.178  Sum_probs=66.3

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      .+.+|||+|+ |.+|...++.+...|. .|+++++++++.+.+...++..++..+-. ++    +.+.    -.++|+||
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~-~~----~~~~----~~~~D~vi   89 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVRNEEQGPELRERGASDIVVANLE-ED----FSHA----FASIDAVV   89 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHTTCSEEEECCTT-SC----CGGG----GTTCSEEE
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEECChHHHHHHHhCCCceEEEcccH-HH----HHHH----HcCCCEEE
Confidence            4789999999 9999999999999998 78888899888877776666233332211 11    1111    24799999


Q ss_pred             EcCCCHH-------------HHHHHHHHccc--CCEEEEEcCCCC
Q 020768          260 DCAGFNK-------------TMSTALSATRA--GGKVCLVGMGHL  289 (321)
Q Consensus       260 d~~g~~~-------------~~~~~~~~l~~--~G~~v~~g~~~~  289 (321)
                      .+.|...             ....+++.++.  .++++.++..+.
T Consensus        90 ~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~  134 (236)
T 3e8x_A           90 FAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGT  134 (236)
T ss_dssp             ECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTC
T ss_pred             ECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCC
Confidence            9998531             12233444432  379999986544

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=97.33  E-value=0.0049  Score=53.07  Aligned_cols=83  Identities=22%  Similarity=0.228  Sum_probs=54.0

Q ss_pred             CCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCCe-EEecCC-CcccHHHHHHHHHHHhC
Q 020768          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADN-IVKVST-NLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       180 ~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~  252 (321)
                      -.+.++||+|+ |++|...+..+...|+ .|++++++.++.+.+.    +.+... .+..+- +..+..+.+.++.+. .
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~  104 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAA-H  104 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHh-c
Confidence            35789999998 9999999998888999 6888888887655432    234321 222222 222333334444332 3


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      +.+|++|.++|.
T Consensus       105 g~id~lv~~Ag~  116 (262)
T 3rkr_A          105 GRCDVLVNNAGV  116 (262)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999985

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.33  E-value=0.0051  Score=53.12  Aligned_cols=107  Identities=21%  Similarity=0.201  Sum_probs=67.7

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCe-EEecCC-CcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .+.++||+|+ |++|...++.+...|+ .|+++++++++.+.+ ++++... .+..+- +.++..+.+.+..+. .+++|
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~g~iD   82 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEE-FGRLH   82 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHH-HSCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHH-cCCCc
Confidence            4678999998 9999999999999999 688888888776544 4454221 222221 222333333433332 35799


Q ss_pred             EEEEcCCCH----------H---------------HHHHHHHHcccCCEEEEEcCCCC
Q 020768          257 VSFDCAGFN----------K---------------TMSTALSATRAGGKVCLVGMGHL  289 (321)
Q Consensus       257 ~vid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~~~  289 (321)
                      ++|++.|..          +               ..+.++..++.+|+++.+++...
T Consensus        83 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  140 (263)
T 2a4k_A           83 GVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAG  140 (263)
T ss_dssp             EEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTT
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchh
Confidence            999998731          1               12334444534799999986544

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.33  E-value=0.0022  Score=49.64  Aligned_cols=78  Identities=13%  Similarity=0.165  Sum_probs=57.3

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  261 (321)
                      .++++|+|+|.+|...++.+...|. .|++++.++++.+.+++.+... +..+..+   .+.+.+   ..-.++|++|.+
T Consensus         6 ~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~~~~~-~~gd~~~---~~~l~~---~~~~~~d~vi~~   77 (141)
T 3llv_A            6 RYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDEGFDA-VIADPTD---ESFYRS---LDLEGVSAVLIT   77 (141)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEE-EECCTTC---HHHHHH---SCCTTCSEEEEC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCCcE-EECCCCC---HHHHHh---CCcccCCEEEEe
Confidence            4689999999999999999999999 6889999999998888877643 3222222   122222   223579999999


Q ss_pred             CCCHHH
Q 020768          262 AGFNKT  267 (321)
Q Consensus       262 ~g~~~~  267 (321)
                      +++...
T Consensus        78 ~~~~~~   83 (141)
T 3llv_A           78 GSDDEF   83 (141)
T ss_dssp             CSCHHH
T ss_pred             cCCHHH
Confidence            997543

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=97.33  E-value=0.0021  Score=57.31  Aligned_cols=81  Identities=12%  Similarity=0.228  Sum_probs=53.5

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCC--C-eEEecCC-CcccHHHHHHHHHHHh
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGA--D-NIVKVST-NLQDIAEEVEKIQKAM  251 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~--~-~vi~~~~-~~~~~~~~~~~~~~~~  251 (321)
                      .+.++||+|+ |++|...+..+...|+ .|++++++.++.+.+.    ..+.  . .++..+- +..++.+.+..+.+. 
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-   84 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR-   84 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh-
Confidence            4789999998 9999999999989999 6888888887655432    2232  1 1222222 223334444444332 


Q ss_pred             CCCccEEEEcCC
Q 020768          252 GTGIDVSFDCAG  263 (321)
Q Consensus       252 ~~~~d~vid~~g  263 (321)
                      .+++|++|.+.|
T Consensus        85 ~g~id~lv~nAg   96 (319)
T 3ioy_A           85 FGPVSILCNNAG   96 (319)
T ss_dssp             TCCEEEEEECCC
T ss_pred             CCCCCEEEECCC
Confidence            457999999998

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=97.32  E-value=0.0025  Score=54.85  Aligned_cols=81  Identities=22%  Similarity=0.322  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHc-----CCC-eEEecCC-CcccHHHHHHHHHHHh
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL-----GAD-NIVKVST-NLQDIAEEVEKIQKAM  251 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~-----g~~-~vi~~~~-~~~~~~~~~~~~~~~~  251 (321)
                      .++++||+|+ |++|...++.+...|+ .|++++++.++.+.+ +++     +.. ..+..+- +..+..+.+.++.+. 
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-   83 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGA-RLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDL-   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHT-
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHh-
Confidence            4678999998 9999999999988999 688888887665433 222     212 2222222 222333344444332 


Q ss_pred             CCCccEEEEcCCC
Q 020768          252 GTGIDVSFDCAGF  264 (321)
Q Consensus       252 ~~~~d~vid~~g~  264 (321)
                      .+ +|++|++.|.
T Consensus        84 ~g-id~lv~~Ag~   95 (260)
T 2z1n_A           84 GG-ADILVYSTGG   95 (260)
T ss_dssp             TC-CSEEEECCCC
T ss_pred             cC-CCEEEECCCC
Confidence            23 9999999883

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=97.32  E-value=0.0049  Score=52.97  Aligned_cols=82  Identities=23%  Similarity=0.313  Sum_probs=55.4

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCe-EEecCCC-cccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADN-IVKVSTN-LQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .++++||+|+ |++|...++.+...|+ +|++++++.++.+.+ ++++... .+..+-. .++..+.+.++.+. .+++|
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~g~id   84 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGA-TVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEH-AGGLD   84 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHH-SSSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHH-cCCCC
Confidence            4789999998 9999999999889999 688888887776544 4555432 2222222 22333344444332 45799


Q ss_pred             EEEEcCCC
Q 020768          257 VSFDCAGF  264 (321)
Q Consensus       257 ~vid~~g~  264 (321)
                      ++|.+.|.
T Consensus        85 ~lv~~Ag~   92 (259)
T 4e6p_A           85 ILVNNAAL   92 (259)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999984

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=97.31  E-value=0.00038  Score=57.61  Aligned_cols=138  Identities=15%  Similarity=0.242  Sum_probs=80.4

Q ss_pred             CcceeEEE-ecCCcEEECCCCCChhhhccchhhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeC
Q 020768          136 GSLANQVV-HPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV  214 (321)
Q Consensus       136 G~~~~~~~-v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~  214 (321)
                      -.|.+|.. .+....+.+++.+.+..+.. +........+.. .++++++||-+|+|. |..+..+++ .+...+++++.
T Consensus        16 p~w~~~~~~~~~~~~~~~~~~~~f~~~~~-~~~~~~~~~l~~-~~~~~~~vLDiG~G~-G~~~~~l~~-~~~~~v~~vD~   91 (205)
T 3grz_A           16 PEWEDYQPVFKDQEIIRLDPGLAFGTGNH-QTTQLAMLGIER-AMVKPLTVADVGTGS-GILAIAAHK-LGAKSVLATDI   91 (205)
T ss_dssp             ETTCCCCCSSTTCEEEEESCC-----CCH-HHHHHHHHHHHH-HCSSCCEEEEETCTT-SHHHHHHHH-TTCSEEEEEES
T ss_pred             ccccccccCCCCceeEEecCCcccCCCCC-ccHHHHHHHHHH-hccCCCEEEEECCCC-CHHHHHHHH-CCCCEEEEEEC
Confidence            34556655 66677788888776655431 111111222222 257889999999876 677777776 46658999999


Q ss_pred             ChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCH---HHHHHHHHHcccCCEEEEEcCC
Q 020768          215 DDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFN---KTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       215 ~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      +++..+.+++    .+...+-....   +..+       .....+|+|+....-.   ..++.+.+.|+++|++++....
T Consensus        92 s~~~~~~a~~~~~~~~~~~v~~~~~---d~~~-------~~~~~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~  161 (205)
T 3grz_A           92 SDESMTAAEENAALNGIYDIALQKT---SLLA-------DVDGKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFSGID  161 (205)
T ss_dssp             CHHHHHHHHHHHHHTTCCCCEEEES---STTT-------TCCSCEEEEEEESCHHHHHHHGGGSGGGEEEEEEEEEEEEE
T ss_pred             CHHHHHHHHHHHHHcCCCceEEEec---cccc-------cCCCCceEEEECCcHHHHHHHHHHHHHhcCCCCEEEEEecC
Confidence            9988877765    35432111111   1111       1136799999765432   1245566789999999986533

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=97.31  E-value=0.003  Score=54.49  Aligned_cols=81  Identities=16%  Similarity=0.182  Sum_probs=53.0

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhH-HHHHHHcCCCeEEecCC-CcccHHHHHHHHHHHhCCCccE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYR-LSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~-~~~~~~~g~~~vi~~~~-~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      .++++||+|+ +++|...++.+...|++ |++++++.++ .+.+++.++.. +..+- +..+..+.+.++.+. .+++|+
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~-~~~Dv~~~~~v~~~~~~~~~~-~g~iD~  102 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGHR-VIISYRTEHASVTELRQAGAVA-LYGDFSCETGIMAFIDLLKTQ-TSSLRA  102 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTCC-EEEEESSCCHHHHHHHHHTCEE-EECCTTSHHHHHHHHHHHHHH-CSCCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHhcCCeE-EECCCCCHHHHHHHHHHHHHh-cCCCCE
Confidence            4678999998 99999999998889994 7777777654 34455566433 22222 223333344444332 457999


Q ss_pred             EEEcCCC
Q 020768          258 SFDCAGF  264 (321)
Q Consensus       258 vid~~g~  264 (321)
                      +|.+.|.
T Consensus       103 lv~nAg~  109 (260)
T 3gem_A          103 VVHNASE  109 (260)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9999883

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=97.30  E-value=0.0055  Score=51.57  Aligned_cols=81  Identities=27%  Similarity=0.244  Sum_probs=52.7

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCeEEecCCC-cccHHHHHHHHHHHhCCCccEE
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~vi~~~~~-~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      +.++||+|+ |++|...+..+...|+ .|++++++.++.+.+ ++++-...+..+-. ..++.+.+.++.+. .+++|++
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~l   82 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGY-RVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEA-FGELSAL   82 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHH-HSCCCEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHH-cCCCCEE
Confidence            568999998 9999999999988998 688888887766544 34432222322222 22333333433332 2479999


Q ss_pred             EEcCCC
Q 020768          259 FDCAGF  264 (321)
Q Consensus       259 id~~g~  264 (321)
                      |.+.|.
T Consensus        83 i~~Ag~   88 (234)
T 2ehd_A           83 VNNAGV   88 (234)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999883

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=97.30  E-value=0.0051  Score=52.92  Aligned_cols=82  Identities=21%  Similarity=0.251  Sum_probs=53.6

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-HcCCC-eEEecCC-CcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .+.++||+|+ |++|...+..+...|+ .|++++++.++.+.+. ++... ..+..+- +..+..+.+.++.+. .+++|
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~-~g~iD   88 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGA-TVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDA-LGGFD   88 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHH-HTCCC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHH-cCCCC
Confidence            4789999998 9999999999989999 6888888877765443 34321 1222221 222333334443332 24799


Q ss_pred             EEEEcCCC
Q 020768          257 VSFDCAGF  264 (321)
Q Consensus       257 ~vid~~g~  264 (321)
                      ++|++.|.
T Consensus        89 ~lv~~Ag~   96 (263)
T 3ak4_A           89 LLCANAGV   96 (263)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999883

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=97.29  E-value=0.0043  Score=52.60  Aligned_cols=78  Identities=24%  Similarity=0.254  Sum_probs=52.8

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      ++++||+|+ |++|...++.+...|+ .|++++++.++  ..++++. ..+..+-.+.+..+.+.++.+. .+++|++|+
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~-~V~~~~r~~~~--~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~-~g~id~lv~   76 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGY-RVAIASRNPEE--AAQSLGA-VPLPTDLEKDDPKGLVKRALEA-LGGLHVLVH   76 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHH--HHHHHTC-EEEECCTTTSCHHHHHHHHHHH-HTSCCEEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHH--HHHhhCc-EEEecCCchHHHHHHHHHHHHH-cCCCCEEEE
Confidence            578999998 9999999999999998 68888887765  3445563 2222222224444444444332 247999999


Q ss_pred             cCCC
Q 020768          261 CAGF  264 (321)
Q Consensus       261 ~~g~  264 (321)
                      +.|.
T Consensus        77 ~Ag~   80 (239)
T 2ekp_A           77 AAAV   80 (239)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9873

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=97.28  E-value=0.0048  Score=53.16  Aligned_cols=107  Identities=20%  Similarity=0.227  Sum_probs=70.2

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCeE-EecC-CCcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNI-VKVS-TNLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~v-i~~~-~~~~~~~~~~~~~~~~~~~  253 (321)
                      .|+++||+|+ +++|...++.+...|+ +|+.+++++++.+.+    ++.|.... +..+ .+.++..+.+.+..+. .+
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~-~G   83 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFET-YS   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence            4789999998 9999999999989999 688889988775533    34564432 2222 1223444444444333 35


Q ss_pred             CccEEEEcCCCH--------------------------HHHHHHHHHc--ccCCEEEEEcCCCC
Q 020768          254 GIDVSFDCAGFN--------------------------KTMSTALSAT--RAGGKVCLVGMGHL  289 (321)
Q Consensus       254 ~~d~vid~~g~~--------------------------~~~~~~~~~l--~~~G~~v~~g~~~~  289 (321)
                      ++|+++++.|-.                          ...+.++..+  +.+|+++.+++..+
T Consensus        84 ~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g  147 (254)
T 4fn4_A           84 RIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAG  147 (254)
T ss_dssp             CCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhh
Confidence            799999998831                          0244555655  33689999986443

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=97.28  E-value=0.0029  Score=55.06  Aligned_cols=82  Identities=17%  Similarity=0.205  Sum_probs=54.3

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCC-eEEecCC-CcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .++++||+|+ +++|...+..+...|+ .|++++++.++.+.+ ++++.. ..+..+- +..+..+.+.++.+. .+++|
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g~iD  104 (272)
T 4dyv_A           27 GKKIAIVTGAGSGVGRAVAVALAGAGY-GVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEK-FGRVD  104 (272)
T ss_dssp             -CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHH-HSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHH-cCCCC
Confidence            4688999998 9999999999999999 688888888776544 455532 2222222 222333334444332 35799


Q ss_pred             EEEEcCCC
Q 020768          257 VSFDCAGF  264 (321)
Q Consensus       257 ~vid~~g~  264 (321)
                      ++|++.|.
T Consensus       105 ~lVnnAg~  112 (272)
T 4dyv_A          105 VLFNNAGT  112 (272)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999884

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=97.28  E-value=0.0054  Score=53.20  Aligned_cols=105  Identities=16%  Similarity=0.294  Sum_probs=66.6

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEe-CChhHHHH----HHHcCCCeE-EecCC-CcccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVD-VDDYRLSV----AKELGADNI-VKVST-NLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~-~~~~~~~~----~~~~g~~~v-i~~~~-~~~~~~~~~~~~~~~~~  252 (321)
                      .|+++||+|+ +++|...++.+...|+ .|++++ ++.++.+.    +++.+.... +..+- +.++..+.+.++.+. .
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~  107 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEA-L  107 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH-c
Confidence            5789999998 9999999999999999 566664 44444332    233454322 22222 223333444444333 3


Q ss_pred             CCccEEEEcCCCH-------------------------HHHHHHHHHcccCCEEEEEcCC
Q 020768          253 TGIDVSFDCAGFN-------------------------KTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       253 ~~~d~vid~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      +++|++|++.|..                         ...+.++..++.+|+++.+++.
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~  167 (271)
T 3v2g_A          108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSN  167 (271)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCG
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeCh
Confidence            4799999998841                         1245566777789999999754

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=97.27  E-value=0.0044  Score=54.05  Aligned_cols=105  Identities=21%  Similarity=0.277  Sum_probs=65.8

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhH-HH----HHHHcCCCe-EEecCC-CcccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYR-LS----VAKELGADN-IVKVST-NLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~-~~----~~~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~  252 (321)
                      .++++||+|+ |++|...++.+...|+ .|++++++.++ .+    .+++.+... .+..+- +..+..+.+.++.+. .
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~  105 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI-F  105 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            4688999998 9999999999999999 57777666543 22    233445432 222221 122333333433332 2


Q ss_pred             CCccEEEEcCCCH----------H---------------HHHHHHHHcccCCEEEEEcCC
Q 020768          253 TGIDVSFDCAGFN----------K---------------TMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       253 ~~~d~vid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      +++|++|++.|..          +               ..+.++..++.+|+++.+++.
T Consensus       106 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~  165 (283)
T 1g0o_A          106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSI  165 (283)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCG
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEech
Confidence            4799999998842          1               234556666677999999864

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=97.26  E-value=0.00066  Score=56.57  Aligned_cols=105  Identities=21%  Similarity=0.248  Sum_probs=72.8

Q ss_pred             HHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHH
Q 020768          172 HACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEK  246 (321)
Q Consensus       172 ~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~  246 (321)
                      ..++...++++++||.+|+| .|..+..+++..+. ..+++++.+++..+.+++    .+...+.....   +....   
T Consensus        68 ~~~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~---d~~~~---  140 (215)
T 2yxe_A           68 MMCELLDLKPGMKVLEIGTG-CGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVG---DGTLG---  140 (215)
T ss_dssp             HHHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEES---CGGGC---
T ss_pred             HHHHhhCCCCCCEEEEECCC-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEEC---CcccC---
Confidence            34466778999999999997 48889999998762 379999999988877764    34433221111   11100   


Q ss_pred             HHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEc
Q 020768          247 IQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       247 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      +  .....+|+|+....-....+.+.+.|+++|++++.-
T Consensus       141 ~--~~~~~fD~v~~~~~~~~~~~~~~~~L~pgG~lv~~~  177 (215)
T 2yxe_A          141 Y--EPLAPYDRIYTTAAGPKIPEPLIRQLKDGGKLLMPV  177 (215)
T ss_dssp             C--GGGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             C--CCCCCeeEEEECCchHHHHHHHHHHcCCCcEEEEEE
Confidence            0  013569999987665555578899999999988774

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=97.25  E-value=0.0046  Score=51.26  Aligned_cols=92  Identities=15%  Similarity=0.253  Sum_probs=62.7

Q ss_pred             EEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcC
Q 020768          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (321)
Q Consensus       184 ~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  262 (321)
                      +|||+|+ |.+|...++.+...|. .|+++++++++.+.+. -++. ++..+-.+.+.    ..+     .++|+||.++
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~-~~~~-~~~~D~~d~~~----~~~-----~~~d~vi~~a   69 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNAGKITQTH-KDIN-ILQKDIFDLTL----SDL-----SDQNVVVDAY   69 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCSHHHHHHC-SSSE-EEECCGGGCCH----HHH-----TTCSEEEECC
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCchhhhhcc-CCCe-EEeccccChhh----hhh-----cCCCEEEECC
Confidence            6999998 9999999999999998 6888888887766543 2333 23222222221    222     4699999999


Q ss_pred             CCH--------HHHHHHHHHcccC--CEEEEEcCC
Q 020768          263 GFN--------KTMSTALSATRAG--GKVCLVGMG  287 (321)
Q Consensus       263 g~~--------~~~~~~~~~l~~~--G~~v~~g~~  287 (321)
                      |..        .....+++.++..  ++++.+++.
T Consensus        70 g~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~  104 (221)
T 3ew7_A           70 GISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGA  104 (221)
T ss_dssp             CSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred             cCCccccchHHHHHHHHHHHHHhcCCceEEEEecc
Confidence            863        2345666676654  689988754

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=97.25  E-value=0.0057  Score=53.27  Aligned_cols=106  Identities=24%  Similarity=0.306  Sum_probs=68.2

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCeE-EecCC-CcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNI-VKVST-NLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~v-i~~~~-~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .++++||+|+ +++|...++.+...|+ .|++++++.++.+.+ ++++.... +..+- +..+..+.+.++.+. .+++|
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g~iD  103 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGA-YVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAK-WGRVD  103 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHH-HSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH-cCCCC
Confidence            4789999998 9999999999999999 688888887766544 45554322 22221 222333334444332 34799


Q ss_pred             EEEEcCCCH----------H---------------HHHHHHHHccc--CCEEEEEcCCC
Q 020768          257 VSFDCAGFN----------K---------------TMSTALSATRA--GGKVCLVGMGH  288 (321)
Q Consensus       257 ~vid~~g~~----------~---------------~~~~~~~~l~~--~G~~v~~g~~~  288 (321)
                      ++|.+.|..          +               ..+.++..+..  +|+++.+++..
T Consensus       104 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~  162 (277)
T 4dqx_A          104 VLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYT  162 (277)
T ss_dssp             EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGG
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchh
Confidence            999999831          1               13345555544  57999998643

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=97.25  E-value=0.0028  Score=54.97  Aligned_cols=106  Identities=18%  Similarity=0.224  Sum_probs=65.1

Q ss_pred             CCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEE-eCChhHHHHH----HHcCCCe-EEecCC-CcccHHHHHHHHHHHh
Q 020768          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIV-DVDDYRLSVA----KELGADN-IVKVST-NLQDIAEEVEKIQKAM  251 (321)
Q Consensus       180 ~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v-~~~~~~~~~~----~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~  251 (321)
                      ..++++||+|+ +++|...++.+...|++ |+++ .++.++.+.+    +..+... .+..+- +..+..+.+.++.+. 
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~~-Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-  102 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGFT-VVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEA-  102 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTCE-EEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-
Confidence            35789999998 99999999988889994 5554 4555444332    3344332 222222 222333334444332 


Q ss_pred             CCCccEEEEcCCCH----------H---------------HHHHHHHHcccCCEEEEEcCC
Q 020768          252 GTGIDVSFDCAGFN----------K---------------TMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       252 ~~~~d~vid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      .+++|++|+++|..          +               ..+.++..++.+|+++.+++.
T Consensus       103 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~  163 (267)
T 3u5t_A          103 FGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTS  163 (267)
T ss_dssp             HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCT
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeCh
Confidence            35799999999842          1               244566677778999999864

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=97.24  E-value=0.0048  Score=53.73  Aligned_cols=106  Identities=22%  Similarity=0.272  Sum_probs=68.3

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCC-eEEecCCC-cccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~-~vi~~~~~-~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .|+++||+|+ +++|...++.+...|+ .|++++++.++.+.+ ++++.. ..+..+-. .++..+.+.++.+. .+++|
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g~iD  105 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAA-FGGVD  105 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHH-HSSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHH-cCCCC
Confidence            4789999998 9999999999888999 688888887776544 455543 22222222 22333334444332 35799


Q ss_pred             EEEEcCCCH----------H---------------HHHHHHHHc--ccCCEEEEEcCCC
Q 020768          257 VSFDCAGFN----------K---------------TMSTALSAT--RAGGKVCLVGMGH  288 (321)
Q Consensus       257 ~vid~~g~~----------~---------------~~~~~~~~l--~~~G~~v~~g~~~  288 (321)
                      ++|++.|..          +               ..+.++..+  +.+|+++.+++..
T Consensus       106 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~  164 (277)
T 3gvc_A          106 KLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLA  164 (277)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGG
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchh
Confidence            999998852          1               133444444  4568999998643

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=97.24  E-value=0.004  Score=53.02  Aligned_cols=82  Identities=22%  Similarity=0.313  Sum_probs=54.0

Q ss_pred             CCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCeEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768          179 IGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       179 ~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      -.+++++||+|+ |++|...++.+...|+ .|++++++.++.+.+ +++.....+.. .+..+ .+.+.++.+. -+++|
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~-~D~~~-~~~~~~~~~~-~~~id   86 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALKDNYTIEV-CNLAN-KEECSNLISK-TSNLD   86 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEE-CCTTS-HHHHHHHHHT-CSCCS
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhccCccEEE-cCCCC-HHHHHHHHHh-cCCCC
Confidence            457889999998 9999999998889998 688888888776654 34443322211 11122 2233333332 25799


Q ss_pred             EEEEcCCC
Q 020768          257 VSFDCAGF  264 (321)
Q Consensus       257 ~vid~~g~  264 (321)
                      ++|.+.|.
T Consensus        87 ~li~~Ag~   94 (249)
T 3f9i_A           87 ILVCNAGI   94 (249)
T ss_dssp             EEEECCC-
T ss_pred             EEEECCCC
Confidence            99999884

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=97.23  E-value=0.005  Score=54.26  Aligned_cols=82  Identities=29%  Similarity=0.380  Sum_probs=54.1

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCCe-EEecCC-CcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      .|+++||+|+ |++|...+..+...|+ .|++++++.++.+.+.    ..+... .+..+- +..+..+.+.++.+. .+
T Consensus        30 ~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g  107 (301)
T 3tjr_A           30 DGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRL-LG  107 (301)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh-CC
Confidence            5789999998 9999999999999999 6888888887765432    234332 222222 222333334443332 35


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|+++|.
T Consensus       108 ~id~lvnnAg~  118 (301)
T 3tjr_A          108 GVDVVFSNAGI  118 (301)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999883

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=97.23  E-value=0.0038  Score=54.07  Aligned_cols=82  Identities=22%  Similarity=0.253  Sum_probs=53.3

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCCe-EEecCC-CcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      .++++||+|+ +++|...+..+...|+ .|++++++.++.+.+.    +.+... .+..+- +..+..+.+.++.+. .+
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g   80 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDT-WG   80 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence            4678999998 9999999999999999 6888888877655432    234322 121221 222333334444332 35


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|++.|.
T Consensus        81 ~iD~lVnnAG~   91 (264)
T 3tfo_A           81 RIDVLVNNAGV   91 (264)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999884

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=97.22  E-value=0.0071  Score=51.57  Aligned_cols=82  Identities=27%  Similarity=0.323  Sum_probs=52.9

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HH---cCCCe-EEecCC-CcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~---~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      .+.++||+|+ |++|...++.+...|+ .|++++++.++.+.+ ++   .+... .+..+- +..+..+.+.++.+. .+
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-~g   83 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGA-AVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEA-LG   83 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence            4688999998 9999999999999999 688888887765533 22   24332 222221 222333333333332 35


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|++.|.
T Consensus        84 ~id~lv~nAg~   94 (247)
T 2jah_A           84 GLDILVNNAGI   94 (247)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=97.22  E-value=0.0031  Score=55.40  Aligned_cols=83  Identities=14%  Similarity=0.148  Sum_probs=52.0

Q ss_pred             CCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HH---cCCCe--EEecCCCc--ccHHHHHHHHHHH
Q 020768          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGADN--IVKVSTNL--QDIAEEVEKIQKA  250 (321)
Q Consensus       180 ~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~---~g~~~--vi~~~~~~--~~~~~~~~~~~~~  250 (321)
                      ..++++||+|+ +++|..+++.+...|+ .|++++++.++.+.+ ++   .+...  .+..+-.+  ....+....+.+.
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~   88 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH   88 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence            35789999998 9999999999888999 688888887764432 22   23222  22222222  2223333333322


Q ss_pred             hCCCccEEEEcCCC
Q 020768          251 MGTGIDVSFDCAGF  264 (321)
Q Consensus       251 ~~~~~d~vid~~g~  264 (321)
                       .+++|++|.++|.
T Consensus        89 -~g~iD~lv~nAg~  101 (311)
T 3o26_A           89 -FGKLDILVNNAGV  101 (311)
T ss_dssp             -HSSCCEEEECCCC
T ss_pred             -CCCCCEEEECCcc
Confidence             3579999999984

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=97.22  E-value=0.0053  Score=53.11  Aligned_cols=106  Identities=19%  Similarity=0.303  Sum_probs=67.3

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeC-ChhHHHH----HHHcCCCeE-EecCC-CcccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV-DDYRLSV----AKELGADNI-VKVST-NLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~-~~~~~~~----~~~~g~~~v-i~~~~-~~~~~~~~~~~~~~~~~  252 (321)
                      .|+++||+|+ +++|...++.+...|+ .|++++. +.++.+.    +++.+.... +..+- +.++..+.+.++.+. .
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~   94 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAH-F   94 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            4789999998 9999999999999999 5666544 4443332    334454322 22221 222333344444333 3


Q ss_pred             CCccEEEEcCCCH----------H---------------HHHHHHHHcccCCEEEEEcCCC
Q 020768          253 TGIDVSFDCAGFN----------K---------------TMSTALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       253 ~~~d~vid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~~  288 (321)
                      +++|++|++.|..          +               ..+.++..+.++|+++.+++..
T Consensus        95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~  155 (270)
T 3is3_A           95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNT  155 (270)
T ss_dssp             SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTT
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCch
Confidence            4799999998842          1               2456667788899999998654

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=97.20  E-value=0.0032  Score=54.70  Aligned_cols=82  Identities=21%  Similarity=0.299  Sum_probs=52.4

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCC-CeE--EecCCC-cccHHHHHHHHHHHh
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGA-DNI--VKVSTN-LQDIAEEVEKIQKAM  251 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~-~~v--i~~~~~-~~~~~~~~~~~~~~~  251 (321)
                      .++++||+|+ |++|...++.+...|+ .|++++++.++.+.+    ++.+. ..+  +..+-. ..+..+.+.++.+. 
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-  108 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ-  108 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh-
Confidence            4689999998 9999999999988999 688888887665433    23332 122  222211 22333333333332 


Q ss_pred             CCCccEEEEcCCC
Q 020768          252 GTGIDVSFDCAGF  264 (321)
Q Consensus       252 ~~~~d~vid~~g~  264 (321)
                      .+++|++|.++|.
T Consensus       109 ~g~iD~vi~~Ag~  121 (279)
T 1xg5_A          109 HSGVDICINNAGL  121 (279)
T ss_dssp             HCCCSEEEECCCC
T ss_pred             CCCCCEEEECCCC
Confidence            2479999999883

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=97.20  E-value=0.0044  Score=53.66  Aligned_cols=82  Identities=26%  Similarity=0.345  Sum_probs=55.2

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH-HHHcCCCeE-EecCC-CcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGADNI-VKVST-NLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~-~~~~g~~~v-i~~~~-~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .|+++||+|+ +++|...++.+...|+ .|++++++.++.+. +++++.... +..+- +..+..+.+.++.+. .+++|
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g~iD  103 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGA-IVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAERE-MEGID  103 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHH-HTSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHH-cCCCC
Confidence            5789999998 9999999999999999 68888888777654 455665432 22221 222333333333332 35799


Q ss_pred             EEEEcCCC
Q 020768          257 VSFDCAGF  264 (321)
Q Consensus       257 ~vid~~g~  264 (321)
                      ++|++.|.
T Consensus       104 ~lvnnAg~  111 (266)
T 3grp_A          104 ILVNNAGI  111 (266)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999985

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.20  E-value=0.0065  Score=52.39  Aligned_cols=82  Identities=22%  Similarity=0.204  Sum_probs=54.1

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCCe-EEecCC-CcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      .|+++||+|+ +++|...++.+...|+ +|++++++.++.+.+.    +.+... .+..+- +..+..+.+.++.+. .+
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g   87 (264)
T 3ucx_A           10 TDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKA-YG   87 (264)
T ss_dssp             TTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-TS
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence            5789999998 9999999999999999 6888888877655432    234332 222222 222333344444332 45


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|++.|.
T Consensus        88 ~id~lv~nAg~   98 (264)
T 3ucx_A           88 RVDVVINNAFR   98 (264)
T ss_dssp             CCSEEEECCCS
T ss_pred             CCcEEEECCCC
Confidence            79999999864

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=97.19  E-value=0.0029  Score=55.31  Aligned_cols=82  Identities=18%  Similarity=0.163  Sum_probs=52.5

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-Hc---CC-C-eEEecCC-CcccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-EL---GA-D-NIVKVST-NLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~---g~-~-~vi~~~~-~~~~~~~~~~~~~~~~~  252 (321)
                      .|+++||+|+ +++|...++.+...|+ .|++++++.++.+.+. ++   +. . ..+..+- +.++..+.+.++.+. .
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~  109 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGY-SVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAE-F  109 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            5789999998 9999999999989999 6888888877655432 22   22 2 2232222 223333344444332 3


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      +++|++|++.|.
T Consensus       110 g~iD~lvnnAG~  121 (281)
T 4dry_A          110 ARLDLLVNNAGS  121 (281)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            579999999884

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.17  E-value=0.0041  Score=54.78  Aligned_cols=82  Identities=21%  Similarity=0.253  Sum_probs=52.4

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-H---HcCC---C-eEEecCC-CcccHHHHHHHHHHH
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-K---ELGA---D-NIVKVST-NLQDIAEEVEKIQKA  250 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~---~~g~---~-~vi~~~~-~~~~~~~~~~~~~~~  250 (321)
                      .+.++||+|+ |++|...++.+...|+ .|++++++.++.+.+ +   +.+.   . ..+..+- +..+..+.+.++.+.
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  103 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK  103 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence            4688999998 9999999999999999 688888887765433 2   2232   1 1222221 122333334443332


Q ss_pred             hCCCccEEEEcCCC
Q 020768          251 MGTGIDVSFDCAGF  264 (321)
Q Consensus       251 ~~~~~d~vid~~g~  264 (321)
                       .+++|++|++.|.
T Consensus       104 -~g~iD~lvnnAG~  116 (297)
T 1xhl_A          104 -FGKIDILVNNAGA  116 (297)
T ss_dssp             -HSCCCEEEECCCC
T ss_pred             -cCCCCEEEECCCc
Confidence             2479999999873

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=97.17  E-value=0.0052  Score=52.86  Aligned_cols=83  Identities=18%  Similarity=0.273  Sum_probs=52.9

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCe-EEecCCC-cccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~  253 (321)
                      .+.++||+|+ |++|...++.+...|+ .|+++++++++.+.+    ++.+... .+..+-. ..+..+.+.++.+..++
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   91 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG   91 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            4678999998 9999999999989998 688888887665432    2234332 2222211 22233333333333336


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|.+.|.
T Consensus        92 ~id~li~~Ag~  102 (266)
T 1xq1_A           92 KLDILINNLGA  102 (266)
T ss_dssp             CCSEEEEECCC
T ss_pred             CCcEEEECCCC
Confidence            79999999884

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=97.16  E-value=0.0081  Score=51.80  Aligned_cols=81  Identities=25%  Similarity=0.298  Sum_probs=52.4

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHc-----CCCe-EEecCC-CcccHHHHHHHHHHHh
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL-----GADN-IVKVST-NLQDIAEEVEKIQKAM  251 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~-----g~~~-vi~~~~-~~~~~~~~~~~~~~~~  251 (321)
                      .++++||+|+ |++|...++.+...|+ .|++++++.++.+.+ +++     +... .+..+- +.++..+.+.++.+. 
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-   89 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER-   89 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHH-
Confidence            4789999998 9999999999888999 688888887765533 222     4322 222221 222333344443332 


Q ss_pred             CCCccEEEEcCC
Q 020768          252 GTGIDVSFDCAG  263 (321)
Q Consensus       252 ~~~~d~vid~~g  263 (321)
                      .+++|++|++.|
T Consensus        90 ~g~id~lv~nAg  101 (267)
T 1iy8_A           90 FGRIDGFFNNAG  101 (267)
T ss_dssp             HSCCSEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence            347999999987

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=97.16  E-value=0.0043  Score=53.16  Aligned_cols=77  Identities=17%  Similarity=0.085  Sum_probs=51.6

Q ss_pred             CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH---HcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK---ELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      +++||+|+ |++|...++.+...|+ .|++++++.++.+.+.   +.+.+... +  +..+..+.+.++.+. .+++|++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~-~--d~~~v~~~~~~~~~~-~g~iD~l   76 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKP-M--SEQEPAELIEAVTSA-YGQVDVL   76 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEE-C--CCCSHHHHHHHHHHH-HSCCCEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCcEEE-E--CHHHHHHHHHHHHHH-hCCCCEE
Confidence            46899998 9999999999999999 6888887776654433   33443222 1  223444444444333 2579999


Q ss_pred             EEcCCC
Q 020768          259 FDCAGF  264 (321)
Q Consensus       259 id~~g~  264 (321)
                      |++.|.
T Consensus        77 v~nAg~   82 (254)
T 1zmt_A           77 VSNDIF   82 (254)
T ss_dssp             EEECCC
T ss_pred             EECCCc
Confidence            999874

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=97.16  E-value=0.0067  Score=52.41  Aligned_cols=82  Identities=23%  Similarity=0.364  Sum_probs=52.4

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH-HHHcCC--C-eEEecCC-CcccHHHHHHHHHHHhCCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGA--D-NIVKVST-NLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~-~~~~g~--~-~vi~~~~-~~~~~~~~~~~~~~~~~~~  254 (321)
                      .+.++||+|+ |++|...++.+...|+ .|++++++.++.+. .++++.  . ..+..+- +..+..+.+.++.+. .++
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   92 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAK-HGK   92 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHH-HSC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHH-cCC
Confidence            4688999998 9999999999888998 68888888766543 344432  1 1222221 122333333333322 247


Q ss_pred             ccEEEEcCCC
Q 020768          255 IDVSFDCAGF  264 (321)
Q Consensus       255 ~d~vid~~g~  264 (321)
                      +|++|.+.|.
T Consensus        93 id~li~~Ag~  102 (278)
T 2bgk_A           93 LDIMFGNVGV  102 (278)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999999873

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=97.16  E-value=0.0016  Score=53.25  Aligned_cols=103  Identities=18%  Similarity=0.241  Sum_probs=65.0

Q ss_pred             cCCCCCCEEEEEcCChhHHHHHHHHHHcCC---------CeEEEEeCChhHHHHHHHcCCCeEE-ecCCCcccHHHHHHH
Q 020768          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGA---------PRIVIVDVDDYRLSVAKELGADNIV-KVSTNLQDIAEEVEK  246 (321)
Q Consensus       177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g~---------~~vv~v~~~~~~~~~~~~~g~~~vi-~~~~~~~~~~~~~~~  246 (321)
                      ..++++++||-+|+|. |..+..+++..+.         ..+++++.++.+.     +.....+ ..+-...+..+.+.+
T Consensus        18 ~~~~~~~~vLDlGcG~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~-----~~~~~~~~~~d~~~~~~~~~~~~   91 (196)
T 2nyu_A           18 QILRPGLRVLDCGAAP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP-----LEGATFLCPADVTDPRTSQRILE   91 (196)
T ss_dssp             CCCCTTCEEEEETCCS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC-----CTTCEEECSCCTTSHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCC-CHHHHHHHHHhccccccccCCCceEEEEechhccc-----CCCCeEEEeccCCCHHHHHHHHH
Confidence            4478999999999988 9999999999874         4799999887431     1111222 111111112222222


Q ss_pred             HHHHhCCCccEEEE-----cCCCH------------HHHHHHHHHcccCCEEEEEcCC
Q 020768          247 IQKAMGTGIDVSFD-----CAGFN------------KTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       247 ~~~~~~~~~d~vid-----~~g~~------------~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      .  ..+..+|+|+.     +++..            ..+..+.+.|+++|++++.-..
T Consensus        92 ~--~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~  147 (196)
T 2nyu_A           92 V--LPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWA  147 (196)
T ss_dssp             H--SGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred             h--cCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC
Confidence            1  12347999994     33321            4577889999999999887543

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=97.15  E-value=0.0078  Score=51.54  Aligned_cols=82  Identities=21%  Similarity=0.287  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-Hc---C-------C-CeEEecCC-CcccHHHHHHH
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-EL---G-------A-DNIVKVST-NLQDIAEEVEK  246 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~---g-------~-~~vi~~~~-~~~~~~~~~~~  246 (321)
                      .+.++||+|+ |++|...+..+...|+ .|++++++.++.+.+. ++   +       . -..+..+- +..+..+.+.+
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   84 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGA-TVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQ   84 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHH
Confidence            4678999998 9999999998888998 6888888877655432 22   1       1 12222221 12233333444


Q ss_pred             HHHHhCCCc-cEEEEcCCC
Q 020768          247 IQKAMGTGI-DVSFDCAGF  264 (321)
Q Consensus       247 ~~~~~~~~~-d~vid~~g~  264 (321)
                      +.+.. +++ |++|.+.|.
T Consensus        85 ~~~~~-g~i~d~vi~~Ag~  102 (264)
T 2pd6_A           85 VQACF-SRPPSVVVSCAGI  102 (264)
T ss_dssp             HHHHH-SSCCSEEEECCCC
T ss_pred             HHHHh-CCCCeEEEECCCc
Confidence            43332 356 999999873

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=97.15  E-value=0.0065  Score=53.25  Aligned_cols=105  Identities=18%  Similarity=0.198  Sum_probs=66.2

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhH-HHH----HHHcCCCeE-EecCC-CcccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYR-LSV----AKELGADNI-VKVST-NLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~-~~~----~~~~g~~~v-i~~~~-~~~~~~~~~~~~~~~~~  252 (321)
                      .|+++||+|+ +++|...++.+...|+ .|++++++.++ .+.    .++.+.... +..+- +..+..+.+.++.+. .
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~  123 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ-L  123 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH-c
Confidence            4789999998 9999999999999999 57777666542 222    233444322 22221 222333334444333 3


Q ss_pred             CCccEEEEcCCCH--------------------------HHHHHHHHHcccCCEEEEEcCC
Q 020768          253 TGIDVSFDCAGFN--------------------------KTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       253 ~~~d~vid~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      +++|++|++.|..                          ...+.++..++.+|+++.+++.
T Consensus       124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~  184 (291)
T 3ijr_A          124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASI  184 (291)
T ss_dssp             SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCT
T ss_pred             CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEech
Confidence            5799999997731                          1234555667778999999864

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=97.15  E-value=0.0048  Score=52.72  Aligned_cols=82  Identities=20%  Similarity=0.243  Sum_probs=54.4

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCC-eEEecCC-CcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .|+++||+|+ +++|...++.+...|+ .|+++++++++.+.+ ++++.. ..+..+- +.++..+.+.++.+. .+++|
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g~iD   85 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGA-KVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDE-FGGVD   85 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHH-HCCCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHH-cCCCC
Confidence            4789999998 9999999999999999 688888888776644 334322 1222221 223333344444333 35799


Q ss_pred             EEEEcCCC
Q 020768          257 VSFDCAGF  264 (321)
Q Consensus       257 ~vid~~g~  264 (321)
                      +++++.|.
T Consensus        86 ~lv~nAg~   93 (248)
T 3op4_A           86 ILVNNAGI   93 (248)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999884

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=97.14  E-value=0.0072  Score=52.15  Aligned_cols=106  Identities=12%  Similarity=0.090  Sum_probs=67.7

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH---HHHcCCCe-EEecC-CCcccHHHHHHHHHHHhCCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV---AKELGADN-IVKVS-TNLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~---~~~~g~~~-vi~~~-~~~~~~~~~~~~~~~~~~~~  254 (321)
                      .|+++||+|+ +++|...++.+...|+ .|+++++++++.+.   +.+.+... .+..+ .+..+..+.+.+..+. .++
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~-~G~   83 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERA-IPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIAT-FGR   83 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHH-HSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHH-hCC
Confidence            4789999998 9999999998889999 67777777654433   33444332 22222 1223344444444333 357


Q ss_pred             ccEEEEcCCCH---------H---------------HHHHHHHHcc-cCCEEEEEcCCC
Q 020768          255 IDVSFDCAGFN---------K---------------TMSTALSATR-AGGKVCLVGMGH  288 (321)
Q Consensus       255 ~d~vid~~g~~---------~---------------~~~~~~~~l~-~~G~~v~~g~~~  288 (321)
                      +|+++++.|-.         +               ..+.++..++ .+|+++.+++..
T Consensus        84 iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~  142 (258)
T 4gkb_A           84 LDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKT  142 (258)
T ss_dssp             CCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTH
T ss_pred             CCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehh
Confidence            99999999852         1               2344455553 579999998643

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=97.12  E-value=0.0075  Score=51.99  Aligned_cols=82  Identities=18%  Similarity=0.209  Sum_probs=53.1

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-H----cCCCeE--EecCC-CcccHHHHHHHHHHHh
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-E----LGADNI--VKVST-NLQDIAEEVEKIQKAM  251 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~----~g~~~v--i~~~~-~~~~~~~~~~~~~~~~  251 (321)
                      .++++||+|+ +++|...++.+...|+ .|++++++.++.+.+. +    .+...+  +..+- +..+..+.+.++.+. 
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-   84 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERT-   84 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHH-
Confidence            4789999998 9999999999999999 6888888877655332 2    333212  22221 222333333443332 


Q ss_pred             CCCccEEEEcCCC
Q 020768          252 GTGIDVSFDCAGF  264 (321)
Q Consensus       252 ~~~~d~vid~~g~  264 (321)
                      .+++|++|++.|.
T Consensus        85 ~g~id~lvnnAg~   97 (265)
T 3lf2_A           85 LGCASILVNNAGQ   97 (265)
T ss_dssp             HCSCSEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            3579999999984

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=97.12  E-value=0.009  Score=51.71  Aligned_cols=82  Identities=24%  Similarity=0.253  Sum_probs=54.5

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH-HHHcCCCe-EEecCC-CcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~-~~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .|+++||+|+ +++|...++.+...|+ +|+++++++++.+. .++++... .+..+- +..+..+.+.++.+. .+++|
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~id   87 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGA-RVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDT-FGRLD   87 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHH-HSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHH-cCCCC
Confidence            4789999998 9999999999999999 68888888776554 34555432 222221 222333334444332 34799


Q ss_pred             EEEEcCCC
Q 020768          257 VSFDCAGF  264 (321)
Q Consensus       257 ~vid~~g~  264 (321)
                      +++++.|.
T Consensus        88 ~lv~nAg~   95 (271)
T 3tzq_B           88 IVDNNAAH   95 (271)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999884

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=97.12  E-value=0.0052  Score=52.84  Aligned_cols=105  Identities=18%  Similarity=0.213  Sum_probs=64.3

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEE-eCChhHHHH----HHHcCCC-eEEecCCC-cccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIV-DVDDYRLSV----AKELGAD-NIVKVSTN-LQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v-~~~~~~~~~----~~~~g~~-~vi~~~~~-~~~~~~~~~~~~~~~~  252 (321)
                      .|+++||+|+ +++|...++.+...|+ .|+++ +++.++.+.    +++.+.. ..+..+-. ..+..+.+.++.+. .
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~   84 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADK-F   84 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-h
Confidence            4789999998 9999999999999999 46655 555544332    2333432 22222222 22333344444332 3


Q ss_pred             CCccEEEEcCCCH-----------H---------------HHHHHHHHcccCCEEEEEcCC
Q 020768          253 TGIDVSFDCAGFN-----------K---------------TMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       253 ~~~d~vid~~g~~-----------~---------------~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      +++|++|.+.|..           +               ..+.++..+.++|+++.+++.
T Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~  145 (259)
T 3edm_A           85 GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQ  145 (259)
T ss_dssp             CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCH
T ss_pred             CCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCH
Confidence            5799999998742           0               233444556668899999853

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.12  E-value=0.0039  Score=53.52  Aligned_cols=81  Identities=22%  Similarity=0.243  Sum_probs=54.2

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCC-cccHHHHHHHHHHHhCCCccEE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~-~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      .++++||+|+ |++|...++.+...|+ .|+++++++++.+..++++. ..+..+-. .++..+.+.++.+. .+++|++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~-~g~iD~l   81 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGG-AFFQVDLEDERERVRFVEEAAYA-LGRVDVL   81 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHH-HSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHH-cCCCCEE
Confidence            4688999998 9999999999989998 68888887766445555542 33333222 22333334443332 3579999


Q ss_pred             EEcCCC
Q 020768          259 FDCAGF  264 (321)
Q Consensus       259 id~~g~  264 (321)
                      |++.|.
T Consensus        82 v~~Ag~   87 (256)
T 2d1y_A           82 VNNAAI   87 (256)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999874

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=97.12  E-value=0.0099  Score=50.87  Aligned_cols=81  Identities=28%  Similarity=0.353  Sum_probs=52.1

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HH---cCCCe-EEecCC-CcccHHHHHHHHHHHhCCC
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGADN-IVKVST-NLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~---~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~  254 (321)
                      ++++||+|+ |++|...++.+...|+ .|+++++++++.+.+ ++   .+... .+..+- +.++..+.+.++.+. .++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~g~   79 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKT-LGG   79 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH-TTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH-hCC
Confidence            568999998 9999999999999999 688888887665433 22   24322 222221 222333334443332 357


Q ss_pred             ccEEEEcCCC
Q 020768          255 IDVSFDCAGF  264 (321)
Q Consensus       255 ~d~vid~~g~  264 (321)
                      +|++|++.|.
T Consensus        80 id~lv~nAg~   89 (256)
T 1geg_A           80 FDVIVNNAGV   89 (256)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=97.12  E-value=0.005  Score=52.98  Aligned_cols=83  Identities=20%  Similarity=0.226  Sum_probs=51.7

Q ss_pred             CCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEE-eCChhHHHHH----HHcCCCe-EEecCC-CcccHHHHHHHHHHHh
Q 020768          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIV-DVDDYRLSVA----KELGADN-IVKVST-NLQDIAEEVEKIQKAM  251 (321)
Q Consensus       180 ~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v-~~~~~~~~~~----~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~  251 (321)
                      ..++++||+|+ |++|...++.+...|++ |+++ .++.++.+.+    ++.+... .+..+- +..+..+.+.++.+. 
T Consensus         2 ~~~k~vlVTGas~gIG~aia~~l~~~G~~-vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-   79 (258)
T 3oid_A            2 EQNKCALVTGSSRGVGKAAAIRLAENGYN-IVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDET-   79 (258)
T ss_dssp             -CCCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-
Confidence            35789999998 99999999999999994 5554 7776655433    2234332 222221 222333344444332 


Q ss_pred             CCCccEEEEcCCC
Q 020768          252 GTGIDVSFDCAGF  264 (321)
Q Consensus       252 ~~~~d~vid~~g~  264 (321)
                      .+++|++|.+.|.
T Consensus        80 ~g~id~lv~nAg~   92 (258)
T 3oid_A           80 FGRLDVFVNNAAS   92 (258)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            3579999999973

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.11  E-value=0.0015  Score=50.41  Aligned_cols=77  Identities=13%  Similarity=0.247  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      .+++|+|+|+|.+|...++.+...|. .|++++.++++.+.+++.+.. .+..+.  .+ .+.+.+.   .-.++|+++.
T Consensus         5 ~~~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~~~~-~~~~d~--~~-~~~l~~~---~~~~~d~vi~   76 (144)
T 2hmt_A            5 KNKQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATH-AVIANA--TE-ENELLSL---GIRNFEYVIV   76 (144)
T ss_dssp             -CCSEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHTTTTTCSE-EEECCT--TC-HHHHHTT---TGGGCSEEEE
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCE-EEEeCC--CC-HHHHHhc---CCCCCCEEEE
Confidence            35689999999999999999999998 577888888887766665553 232221  12 1222221   1246899999


Q ss_pred             cCCCH
Q 020768          261 CAGFN  265 (321)
Q Consensus       261 ~~g~~  265 (321)
                      +++.+
T Consensus        77 ~~~~~   81 (144)
T 2hmt_A           77 AIGAN   81 (144)
T ss_dssp             CCCSC
T ss_pred             CCCCc
Confidence            99974

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=97.10  E-value=0.0076  Score=52.21  Aligned_cols=82  Identities=18%  Similarity=0.191  Sum_probs=53.5

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCC-eEEecCC-CcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGAD-NIVKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      .++++||+|+ +++|...+..+...|+ .|++++++.++.+.+    ++.+.. ..+..+- +..+..+.+.++.+. .+
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g  104 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGA-MVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKE-FG  104 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHH-cC
Confidence            4788999998 9999999999889999 688888887665433    233432 2222222 223333344444332 35


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|++.|.
T Consensus       105 ~iD~lvnnAg~  115 (270)
T 3ftp_A          105 ALNVLVNNAGI  115 (270)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999983

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=97.09  E-value=0.0032  Score=52.80  Aligned_cols=103  Identities=16%  Similarity=0.105  Sum_probs=70.6

Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcC-----CCeEEEEeCChhHHHHHHHc----C-----CCeEEecCCCcc-cHHH
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFG-----APRIVIVDVDDYRLSVAKEL----G-----ADNIVKVSTNLQ-DIAE  242 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g-----~~~vv~v~~~~~~~~~~~~~----g-----~~~vi~~~~~~~-~~~~  242 (321)
                      .++++++||-+|+|. |..+..+++..+     ...+++++.+++..+.+++.    +     ...+.....+.. .+.+
T Consensus        77 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~  155 (227)
T 2pbf_A           77 VLKPGSRAIDVGSGS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEE  155 (227)
T ss_dssp             TSCTTCEEEEESCTT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHH
T ss_pred             hCCCCCEEEEECCCC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccc
Confidence            688999999999976 888889999876     23799999999888777643    3     222211111111 1110


Q ss_pred             HHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcC
Q 020768          243 EVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       243 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      ...     ....+|+|+....-...+..+.+.|+++|++++.-.
T Consensus       156 ~~~-----~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~~  194 (227)
T 2pbf_A          156 EKK-----ELGLFDAIHVGASASELPEILVDLLAENGKLIIPIE  194 (227)
T ss_dssp             HHH-----HHCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEEE
T ss_pred             cCc-----cCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEc
Confidence            001     135799999887766677899999999999887753

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=97.09  E-value=0.0052  Score=52.79  Aligned_cols=105  Identities=23%  Similarity=0.266  Sum_probs=64.3

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHH-cCCCeEEEEeCChhHHHHH-H---HcCCC-eEEecCCC-cccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARA-FGAPRIVIVDVDDYRLSVA-K---ELGAD-NIVKVSTN-LQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~-~g~~~vv~v~~~~~~~~~~-~---~~g~~-~vi~~~~~-~~~~~~~~~~~~~~~~  252 (321)
                      .+.++||+|+ |++|...+..+.. .|+ .|++++++.++.+.+ +   ..+.. ..+..+-. ..+..+.+.++.+. .
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~   80 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKE-Y   80 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHh-c
Confidence            5688999998 9999998888887 898 688888886654432 2   22422 22222222 22333334443332 2


Q ss_pred             CCccEEEEcCCCH----------H---------------HHHHHHHHcccCCEEEEEcCC
Q 020768          253 TGIDVSFDCAGFN----------K---------------TMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       253 ~~~d~vid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      +++|++|.++|..          +               ..+.++..++++|+++.+++.
T Consensus        81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~  140 (276)
T 1wma_A           81 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSI  140 (276)
T ss_dssp             SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCH
T ss_pred             CCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECCh
Confidence            4799999998742          1               122333445556899999853

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=97.09  E-value=0.0077  Score=51.90  Aligned_cols=106  Identities=19%  Similarity=0.171  Sum_probs=65.3

Q ss_pred             CCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCC-----C-eEEecCC-CcccHHHHHHHHHHH
Q 020768          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGA-----D-NIVKVST-NLQDIAEEVEKIQKA  250 (321)
Q Consensus       180 ~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~-----~-~vi~~~~-~~~~~~~~~~~~~~~  250 (321)
                      -.++++||+|+ |++|...++.+...|+ .|++++++.++.+.+ +++..     . ..+..+- +..+..+.+..+.+.
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH   83 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence            35789999998 9999999999999998 688888887665432 23321     1 1222221 222333334433332


Q ss_pred             hCCCccEEEEcCCCH--H---------------HHHHHHHHccc-----CCEEEEEcCC
Q 020768          251 MGTGIDVSFDCAGFN--K---------------TMSTALSATRA-----GGKVCLVGMG  287 (321)
Q Consensus       251 ~~~~~d~vid~~g~~--~---------------~~~~~~~~l~~-----~G~~v~~g~~  287 (321)
                       .+++|++|++.|..  +               ..+.++..+..     .|+++.+++.
T Consensus        84 -~g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~  141 (267)
T 2gdz_A           84 -FGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSL  141 (267)
T ss_dssp             -HSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCG
T ss_pred             -cCCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCc
Confidence             24799999999842  1               12344455543     5899999864

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=97.09  E-value=0.0056  Score=52.41  Aligned_cols=82  Identities=20%  Similarity=0.259  Sum_probs=53.7

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCe-EEecCC-CcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .++++||+|+ |++|...++.+...|+ .|++++++.++.+.+ ++++... .+..+- +.++..+.+.++.+. .+++|
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~g~id   82 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRR-LGTLN   82 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHH-HCSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHH-cCCCC
Confidence            4678999998 9999999999988999 688888887766543 4455332 222221 122333333443332 24799


Q ss_pred             EEEEcCCC
Q 020768          257 VSFDCAGF  264 (321)
Q Consensus       257 ~vid~~g~  264 (321)
                      ++|++.|.
T Consensus        83 ~lv~~Ag~   90 (253)
T 1hxh_A           83 VLVNNAGI   90 (253)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999884

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=97.09  E-value=0.005  Score=54.53  Aligned_cols=100  Identities=12%  Similarity=0.227  Sum_probs=71.3

Q ss_pred             HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHc----CCCeEEecCCCcccHHHHHHHHHHH
Q 020768          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL----GADNIVKVSTNLQDIAEEVEKIQKA  250 (321)
Q Consensus       175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~----g~~~vi~~~~~~~~~~~~~~~~~~~  250 (321)
                      +...++++++||-+|+|. |..+..+++..|. .+++++.+++..+.+++.    |...-+.+..  .+..    ++   
T Consensus        84 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~--~d~~----~~---  152 (318)
T 2fk8_A           84 DKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLL--QGWE----DF---  152 (318)
T ss_dssp             TTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEE--SCGG----GC---
T ss_pred             HhcCCCCcCEEEEEcccc-hHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE--CChH----HC---
Confidence            456788999999999976 8888899988787 799999999988887753    4322111111  1111    11   


Q ss_pred             hCCCccEEEEc-----CCC---HHHHHHHHHHcccCCEEEEEcC
Q 020768          251 MGTGIDVSFDC-----AGF---NKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       251 ~~~~~d~vid~-----~g~---~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                       ...+|+|+..     .+.   ...+..+.+.|+++|++++...
T Consensus       153 -~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  195 (318)
T 2fk8_A          153 -AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSS  195 (318)
T ss_dssp             -CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             -CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence             2579999976     432   3567888999999999988764

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=97.08  E-value=0.0065  Score=53.35  Aligned_cols=106  Identities=17%  Similarity=0.162  Sum_probs=65.7

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCCh--hHHH----HHHHcCCCeEE-ecCC-CcccHHHHHHHHHHHh
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD--YRLS----VAKELGADNIV-KVST-NLQDIAEEVEKIQKAM  251 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~--~~~~----~~~~~g~~~vi-~~~~-~~~~~~~~~~~~~~~~  251 (321)
                      .|+++||+|+ +++|...+..+...|+ .|++++++.  ++.+    .+++.+..... ..+- +..+..+.+.++.+. 
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-  125 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREA-  125 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH-
Confidence            4789999998 9999999999999999 577766552  2222    23344543222 1111 122233333333332 


Q ss_pred             CCCccEEEEcCCCH--------------------------HHHHHHHHHcccCCEEEEEcCCC
Q 020768          252 GTGIDVSFDCAGFN--------------------------KTMSTALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       252 ~~~~d~vid~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~~  288 (321)
                      .+++|++|.+.|..                          ...+.++..++.+|+++.+++..
T Consensus       126 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~  188 (294)
T 3r3s_A          126 LGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQ  188 (294)
T ss_dssp             HTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGG
T ss_pred             cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChh
Confidence            35799999998841                          12344556677789999998643

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=97.08  E-value=0.0087  Score=51.46  Aligned_cols=82  Identities=26%  Similarity=0.371  Sum_probs=52.7

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HH---cCCCe-EEecCC-CcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~---~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      .++++||+|+ |++|...++.+...|+ .|++++++.++.+.+ ++   .+... .+..+- +..+..+.+.++.+. .+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g   83 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRD-FG   83 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH-hC
Confidence            4689999998 9999999999999999 688888887665533 22   24332 222221 222333333433332 24


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|++.|.
T Consensus        84 ~id~lv~nAg~   94 (262)
T 1zem_A           84 KIDFLFNNAGY   94 (262)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=97.07  E-value=0.0075  Score=52.43  Aligned_cols=81  Identities=15%  Similarity=0.158  Sum_probs=53.0

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCe-EEecCC-CcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      .|+++||+|+ +++|...++.+...|+ +|++++++.++.+.+    ++.+... .+..+- +..+..+.+.++.+.  +
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~--g  108 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI--A  108 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH--S
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh--C
Confidence            4789999998 9999999999999999 688887776554332    2234332 222221 223334444444333  6


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|++.|.
T Consensus       109 ~iD~lvnnAg~  119 (275)
T 4imr_A          109 PVDILVINASA  119 (275)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999984

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=97.07  E-value=0.0018  Score=54.62  Aligned_cols=103  Identities=22%  Similarity=0.262  Sum_probs=70.2

Q ss_pred             cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHc----CCCe-EEecCCCcccHHHHHHHHHHHh
Q 020768          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL----GADN-IVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~----g~~~-vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      ....++++||-+|+| .|..+..+++......+++++.+++..+.+++.    |... +.....   +..+.+....  .
T Consensus        50 ~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~---d~~~~~~~~~--~  123 (233)
T 2gpy_A           50 LKMAAPARILEIGTA-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFG---DALQLGEKLE--L  123 (233)
T ss_dssp             HHHHCCSEEEEECCT-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS---CGGGSHHHHT--T
T ss_pred             HhccCCCEEEEecCC-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC---CHHHHHHhcc--c
Confidence            344678899999987 688888999987444899999999888877653    5432 222212   2211111110  1


Q ss_pred             CCCccEEEEcCCC---HHHHHHHHHHcccCCEEEEEc
Q 020768          252 GTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       252 ~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      ...+|+|+.....   ...+..+.+.|+++|+++...
T Consensus       124 ~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  160 (233)
T 2gpy_A          124 YPLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSDN  160 (233)
T ss_dssp             SCCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEET
T ss_pred             CCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence            3579999976653   456788899999999998864

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=97.06  E-value=0.0067  Score=51.55  Aligned_cols=82  Identities=18%  Similarity=0.180  Sum_probs=52.4

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCC--C-eEEecCCC-cccHHHHHHHHHHHhCCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGA--D-NIVKVSTN-LQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~--~-~vi~~~~~-~~~~~~~~~~~~~~~~~~  254 (321)
                      .+.++||+|+ |++|...++.+...|+ .|++++++.++.+.+ +++..  . ..+..+-. ..+..+.+.++.+. .++
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   82 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKA-FGP   82 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHH-HSS
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHH-hCC
Confidence            4678999998 9999999999988999 688888887665543 33331  1 22222221 22333333333322 247


Q ss_pred             ccEEEEcCCC
Q 020768          255 IDVSFDCAGF  264 (321)
Q Consensus       255 ~d~vid~~g~  264 (321)
                      +|++|.+.|.
T Consensus        83 id~li~~Ag~   92 (251)
T 1zk4_A           83 VSTLVNNAGI   92 (251)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=97.05  E-value=0.0029  Score=53.69  Aligned_cols=105  Identities=20%  Similarity=0.261  Sum_probs=70.9

Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHHHHc----CCCeEEecCCCcccHHHHHHHHHHH--
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKEL----GADNIVKVSTNLQDIAEEVEKIQKA--  250 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~~~~----g~~~vi~~~~~~~~~~~~~~~~~~~--  250 (321)
                      ...++++||-+|+| .|..+..+++..+ ...+++++.+++..+.+++.    |....+.+..  .+..+.+..+...  
T Consensus        57 ~~~~~~~VLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~--~d~~~~~~~~~~~~~  133 (239)
T 2hnk_A           57 KISGAKRIIEIGTF-TGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKL--GSALETLQVLIDSKS  133 (239)
T ss_dssp             HHHTCSEEEEECCT-TCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE--SCHHHHHHHHHHCSS
T ss_pred             HhhCcCEEEEEeCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEE--CCHHHHHHHHHhhcc
Confidence            44678899999987 4888899999874 34899999999888777653    5432111111  2333333322110  


Q ss_pred             --------h-C-CCccEEEEcCCCH---HHHHHHHHHcccCCEEEEEc
Q 020768          251 --------M-G-TGIDVSFDCAGFN---KTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       251 --------~-~-~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g  285 (321)
                              . + ..+|+|+......   ..+..+.+.|+++|.++.-.
T Consensus       134 ~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  181 (239)
T 2hnk_A          134 APSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADN  181 (239)
T ss_dssp             CCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             cccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence                    0 1 5799999876644   56788899999999999865

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=97.05  E-value=0.0018  Score=57.64  Aligned_cols=104  Identities=24%  Similarity=0.287  Sum_probs=71.8

Q ss_pred             HHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHH
Q 020768          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKI  247 (321)
Q Consensus       173 ~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~  247 (321)
                      .++...++++++||-+|+|. |..+..+++..+. ..|++++.+++..+.+++    .|...+.....   +..+...  
T Consensus        67 l~~~l~~~~~~~VLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~---d~~~~~~--  140 (317)
T 1dl5_A           67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCG---DGYYGVP--  140 (317)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES---CGGGCCG--
T ss_pred             HHHhcCCCCcCEEEEecCCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEEC---Chhhccc--
Confidence            34667889999999999976 8888888887542 369999999988887764    35443221111   1111000  


Q ss_pred             HHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEc
Q 020768          248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       248 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                         ....+|+|+....-....+.+.+.|+++|++++.-
T Consensus       141 ---~~~~fD~Iv~~~~~~~~~~~~~~~LkpgG~lvi~~  175 (317)
T 1dl5_A          141 ---EFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVPI  175 (317)
T ss_dssp             ---GGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEEB
T ss_pred             ---cCCCeEEEEEcCCHHHHHHHHHHhcCCCcEEEEEE
Confidence               13569999987665444578889999999988764

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=97.05  E-value=0.0082  Score=51.81  Aligned_cols=82  Identities=30%  Similarity=0.346  Sum_probs=54.2

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-H----cCCCe-EEecCC-CcccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-E----LGADN-IVKVST-NLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~----~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~  252 (321)
                      .|+++||+|+ +++|...++.+...|+ .|++++++.++.+.+. +    .+... .+..+- +..+..+.+.++.+. .
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~   96 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGA-RLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEA-F   96 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH-c
Confidence            4789999998 9999999999999999 6888888877655432 2    34332 222221 223344444444333 3


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      +++|++|++.|.
T Consensus        97 g~id~lv~nAg~  108 (266)
T 4egf_A           97 GGLDVLVNNAGI  108 (266)
T ss_dssp             TSCSEEEEECCC
T ss_pred             CCCCEEEECCCc
Confidence            579999999884

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=97.04  E-value=0.004  Score=54.11  Aligned_cols=82  Identities=16%  Similarity=0.101  Sum_probs=53.9

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCe-EEecCCC-cccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADN-IVKVSTN-LQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .+.++||+|+ |++|...++.+...|+ .|++++++.++.+.+ ++++... .+..+-. ..+..+.+.++.+. .+++|
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-~g~id   81 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGD-TVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLAR-YGRVD   81 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHH-HSCCS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHh-CCCCC
Confidence            4678999998 9999999999999999 688888887765544 4454322 2222222 22333334443332 34799


Q ss_pred             EEEEcCCC
Q 020768          257 VSFDCAGF  264 (321)
Q Consensus       257 ~vid~~g~  264 (321)
                      ++|.+.|.
T Consensus        82 ~lv~~Ag~   89 (281)
T 3m1a_A           82 VLVNNAGR   89 (281)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999884

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.04  E-value=0.011  Score=51.32  Aligned_cols=105  Identities=20%  Similarity=0.264  Sum_probs=65.6

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCC------------hhHHHH----HHHcCCCe-EEecCC-CcccHH
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD------------DYRLSV----AKELGADN-IVKVST-NLQDIA  241 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~------------~~~~~~----~~~~g~~~-vi~~~~-~~~~~~  241 (321)
                      .|+++||+|+ +++|...++.+...|+ .|++++++            .++.+.    ++..+... .+..+- +..+..
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   87 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVS   87 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHH
Confidence            4789999998 9999999999999999 67777765            333332    23344332 222221 222333


Q ss_pred             HHHHHHHHHhCCCccEEEEcCCCH--------H---------------HHHHHHHHcccCCEEEEEcCC
Q 020768          242 EEVEKIQKAMGTGIDVSFDCAGFN--------K---------------TMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       242 ~~~~~~~~~~~~~~d~vid~~g~~--------~---------------~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      +.+.++.+. .+++|++|++.|..        +               ..+.++..+..+|+++.+++.
T Consensus        88 ~~~~~~~~~-~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~  155 (287)
T 3pxx_A           88 RELANAVAE-FGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSV  155 (287)
T ss_dssp             HHHHHHHHH-HSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCH
T ss_pred             HHHHHHHHH-cCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccc
Confidence            334444332 34799999998841        1               233445556778999999863

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=97.02  E-value=0.005  Score=53.11  Aligned_cols=105  Identities=14%  Similarity=0.177  Sum_probs=63.1

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCCh---hHHHH-HHH---cCCCe-EEecCC-CcccHHHHHHHHHHH
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD---YRLSV-AKE---LGADN-IVKVST-NLQDIAEEVEKIQKA  250 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~---~~~~~-~~~---~g~~~-vi~~~~-~~~~~~~~~~~~~~~  250 (321)
                      .++++||+|+ +++|...++.+...|+ .|+++.++.   ++.+. .++   .+... .+..+- +.++..+.+.++.+.
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   88 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKE   88 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4789999998 9999999999988999 577765543   23222 222   23322 122221 222333334444332


Q ss_pred             hCCCccEEEEcCCCH----------H---------------HHHHHHHHcccCCEEEEEcCC
Q 020768          251 MGTGIDVSFDCAGFN----------K---------------TMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       251 ~~~~~d~vid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~  287 (321)
                       .+++|++|++.|..          +               ..+.++..++.+|+++.+++.
T Consensus        89 -~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~  149 (262)
T 3ksu_A           89 -FGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATS  149 (262)
T ss_dssp             -HCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCC
T ss_pred             -cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEech
Confidence             35799999999831          1               233444555678999999864

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=97.02  E-value=0.005  Score=52.67  Aligned_cols=99  Identities=18%  Similarity=0.245  Sum_probs=64.9

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecC-CCcccHHHHHHHHHHHhCCCccEE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~-~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      -++++||+|+ |++|...++.+...|+ .|++++++.++.+.       ..+..+ .+..+..+.+.++.+ ..+++|++
T Consensus        21 m~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~-------~~~~~d~~d~~~v~~~~~~~~~-~~g~iD~l   91 (251)
T 3orf_A           21 MSKNILVLGGSGALGAEVVKFFKSKSW-NTISIDFRENPNAD-------HSFTIKDSGEEEIKSVIEKINS-KSIKVDTF   91 (251)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCTTSS-------EEEECSCSSHHHHHHHHHHHHT-TTCCEEEE
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCcccccc-------cceEEEeCCHHHHHHHHHHHHH-HcCCCCEE
Confidence            3678999998 9999999999999999 68888887665321       111111 222333334444433 24579999


Q ss_pred             EEcCCCH-----------H---------------HHHHHHHHcccCCEEEEEcCCC
Q 020768          259 FDCAGFN-----------K---------------TMSTALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       259 id~~g~~-----------~---------------~~~~~~~~l~~~G~~v~~g~~~  288 (321)
                      |.+.|..           +               ..+.+...++++|+++.+++..
T Consensus        92 i~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~  147 (251)
T 3orf_A           92 VCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASA  147 (251)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred             EECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechh
Confidence            9999831           0               2345556677789999998643

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=97.01  E-value=0.0067  Score=54.72  Aligned_cols=104  Identities=20%  Similarity=0.190  Sum_probs=66.0

Q ss_pred             HHHcCC--CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCC---cccH--------
Q 020768          174 CRRANI--GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTN---LQDI--------  240 (321)
Q Consensus       174 l~~~~~--~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~---~~~~--------  240 (321)
                      ++..+.  -.|++|.|.|.|.+|+.+++.++.+|+ +|++.+.+.++.+++++++++.+ +.++-   ..|.        
T Consensus       165 ~~~~G~~~L~GktV~I~G~GnVG~~~A~~l~~~Ga-kVvvsD~~~~~~~~a~~~ga~~v-~~~ell~~~~DIliP~A~~~  242 (355)
T 1c1d_A          165 VAHRGLGSLDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTAV-ALEDVLSTPCDVFAPCAMGG  242 (355)
T ss_dssp             HHHTTCCCSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC-CGGGGGGCCCSEEEECSCSC
T ss_pred             HHhcCCCCCCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHhcCCEEe-ChHHhhcCccceecHhHHHh
Confidence            344443  478999999999999999999999999 67788888777677777876432 11000   0000        


Q ss_pred             ---HHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEc
Q 020768          241 ---AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       241 ---~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                         .+.+..      -+.++|+++...+.+.+.+.+.|..+|.++.-+
T Consensus       243 ~I~~~~~~~------lk~~iVie~AN~p~t~~eA~~~L~~~gIlv~Pd  284 (355)
T 1c1d_A          243 VITTEVART------LDCSVVAGAANNVIADEAASDILHARGILYAPD  284 (355)
T ss_dssp             CBCHHHHHH------CCCSEECCSCTTCBCSHHHHHHHHHTTCEECCH
T ss_pred             hcCHHHHhh------CCCCEEEECCCCCCCCHHHHHHHHhCCEEEECC
Confidence               011111      235677776666543335567777777666554

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=97.01  E-value=0.0073  Score=53.06  Aligned_cols=101  Identities=11%  Similarity=0.157  Sum_probs=72.5

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHc----CCC-eEEecCCCcccHHHHHHHHH
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL----GAD-NIVKVSTNLQDIAEEVEKIQ  248 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~----g~~-~vi~~~~~~~~~~~~~~~~~  248 (321)
                      ++...++++++||-+|+|. |..+..+++..|. .+++++.+++..+.+++.    |.. .+-....   ++.    ++ 
T Consensus        65 ~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~---d~~----~~-  134 (302)
T 3hem_A           65 LDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQ---GWE----EF-  134 (302)
T ss_dssp             HHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEEC---CGG----GC-
T ss_pred             HHHcCCCCcCEEEEeeccC-cHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC---CHH----Hc-
Confidence            4567889999999999975 8888899998886 799999999888777643    433 2211111   211    11 


Q ss_pred             HHhCCCccEEEEcCC-----C----------HHHHHHHHHHcccCCEEEEEcCC
Q 020768          249 KAMGTGIDVSFDCAG-----F----------NKTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       249 ~~~~~~~d~vid~~g-----~----------~~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                         ...+|+|+....     .          ...+..+.+.|+++|++++....
T Consensus       135 ---~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~  185 (302)
T 3hem_A          135 ---DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTIT  185 (302)
T ss_dssp             ---CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEE
T ss_pred             ---CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence               467999997432     1          25678899999999999987643

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.00  E-value=0.0092  Score=51.69  Aligned_cols=82  Identities=22%  Similarity=0.236  Sum_probs=52.0

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHc---C---CC-eEEecCC-CcccHHHHHHHHHHH
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---G---AD-NIVKVST-NLQDIAEEVEKIQKA  250 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~---g---~~-~vi~~~~-~~~~~~~~~~~~~~~  250 (321)
                      .+.++||+|+ |++|...++.+...|+ .|++++++.++.+.+ +++   .   .. ..+..+- +..+..+.+.++.+.
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   83 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence            4678999998 9999999998888998 688888887765543 333   2   11 1222221 222333333433332


Q ss_pred             hCCCccEEEEcCCC
Q 020768          251 MGTGIDVSFDCAGF  264 (321)
Q Consensus       251 ~~~~~d~vid~~g~  264 (321)
                       .+++|++|++.|.
T Consensus        84 -~g~id~lv~~Ag~   96 (278)
T 1spx_A           84 -FGKLDILVNNAGA   96 (278)
T ss_dssp             -HSCCCEEEECCC-
T ss_pred             -cCCCCEEEECCCC
Confidence             2479999999874

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=96.97  E-value=0.0046  Score=53.13  Aligned_cols=82  Identities=13%  Similarity=0.186  Sum_probs=53.0

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HH---cCCCe-EEecCC-CcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~---~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      .++++||+|+ |++|...++.+...|+ .|+++++++++.+.+ ++   .+... .+..+- +.++..+.+.++.+..++
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   86 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   86 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999998 9999999999888999 688888887765432 22   24321 122221 222333344444333226


Q ss_pred             CccEEEEcCC
Q 020768          254 GIDVSFDCAG  263 (321)
Q Consensus       254 ~~d~vid~~g  263 (321)
                      ++|++|++.|
T Consensus        87 ~id~lv~~Ag   96 (260)
T 2ae2_A           87 KLNILVNNAG   96 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999988

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=96.97  E-value=0.013  Score=50.84  Aligned_cols=83  Identities=20%  Similarity=0.181  Sum_probs=51.9

Q ss_pred             CCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeC-------------ChhHHHHH----HHcCCCeE-EecCC-Cccc
Q 020768          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV-------------DDYRLSVA----KELGADNI-VKVST-NLQD  239 (321)
Q Consensus       180 ~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~-------------~~~~~~~~----~~~g~~~v-i~~~~-~~~~  239 (321)
                      -.|+++||+|+ +++|...++.+...|+ .|+++++             +.++.+.+    ++.+.... +..+- +..+
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   91 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAA   91 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            35789999998 9999999999999999 6777765             44444332    23343322 21221 2223


Q ss_pred             HHHHHHHHHHHhCCCccEEEEcCCC
Q 020768          240 IAEEVEKIQKAMGTGIDVSFDCAGF  264 (321)
Q Consensus       240 ~~~~~~~~~~~~~~~~d~vid~~g~  264 (321)
                      ..+.+.++.+. .+++|++|++.|.
T Consensus        92 v~~~~~~~~~~-~g~id~lvnnAg~  115 (280)
T 3pgx_A           92 LRELVADGMEQ-FGRLDVVVANAGV  115 (280)
T ss_dssp             HHHHHHHHHHH-HCCCCEEEECCCC
T ss_pred             HHHHHHHHHHH-cCCCCEEEECCCC
Confidence            33334443332 3579999999884

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.97  E-value=0.0082  Score=51.09  Aligned_cols=81  Identities=26%  Similarity=0.296  Sum_probs=54.3

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCeEEecCC-CcccHHHHHHHHHHHhCCCccE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~vi~~~~-~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      .+.++||+|+ |++|...++.+...|+ .|+++++++++.+.+ +++++ ..+..+- +.++..+.+.++.+. .+++|+
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~-~g~id~   80 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGA-HPVVMDVADPASVERGFAEALAH-LGRLDG   80 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTC-EEEECCTTCHHHHHHHHHHHHHH-HSSCCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCC-EEEEecCCCHHHHHHHHHHHHHH-cCCCCE
Confidence            4678999998 9999999999999999 688888887776544 44553 2232222 222333334443332 357999


Q ss_pred             EEEcCCC
Q 020768          258 SFDCAGF  264 (321)
Q Consensus       258 vid~~g~  264 (321)
                      +|++.|.
T Consensus        81 lvn~Ag~   87 (245)
T 1uls_A           81 VVHYAGI   87 (245)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999983

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=96.97  E-value=0.006  Score=52.18  Aligned_cols=107  Identities=18%  Similarity=0.254  Sum_probs=65.6

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-Hc-----C-C-CeEEecCC-CcccHHHHHHHHHHH
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-EL-----G-A-DNIVKVST-NLQDIAEEVEKIQKA  250 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~-----g-~-~~vi~~~~-~~~~~~~~~~~~~~~  250 (321)
                      .++++||+|+ +++|...++.+...|+ +|+.++++.++.+.+. ++     + . ...+..+- +.++..+.+.++.+.
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK   84 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence            4678999998 9999999998888999 6888888887655433 22     2 1 12222222 223333344444332


Q ss_pred             hCCCccEEEEcCCCH---------H---------------HHHHHHHHc--ccCCEEEEEcCCCC
Q 020768          251 MGTGIDVSFDCAGFN---------K---------------TMSTALSAT--RAGGKVCLVGMGHL  289 (321)
Q Consensus       251 ~~~~~d~vid~~g~~---------~---------------~~~~~~~~l--~~~G~~v~~g~~~~  289 (321)
                       .+++|++|++.|..         +               ..+.++..+  +..|+++.+++...
T Consensus        85 -~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~  148 (250)
T 3nyw_A           85 -YGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAA  148 (250)
T ss_dssp             -HCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC---
T ss_pred             -cCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHh
Confidence             35799999999851         1               123334443  34689999986543

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=96.96  E-value=0.013  Score=52.79  Aligned_cols=107  Identities=24%  Similarity=0.226  Sum_probs=66.8

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhH-----------HHHHHHcCCCeE-EecCC-CcccHHHHHHH
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYR-----------LSVAKELGADNI-VKVST-NLQDIAEEVEK  246 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~-----------~~~~~~~g~~~v-i~~~~-~~~~~~~~~~~  246 (321)
                      .|+++||+|+ +++|...+..+...|+ .|+.++++.++           .+.+++.|.... +..+- +.++..+.+.+
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~  122 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGA-NIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEK  122 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCC-EEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            5789999998 9999999999888999 67777777653           233344453321 22221 22333344444


Q ss_pred             HHHHhCCCccEEEEcCCCH----------H---------------HHHHHHHHccc--CCEEEEEcCCCC
Q 020768          247 IQKAMGTGIDVSFDCAGFN----------K---------------TMSTALSATRA--GGKVCLVGMGHL  289 (321)
Q Consensus       247 ~~~~~~~~~d~vid~~g~~----------~---------------~~~~~~~~l~~--~G~~v~~g~~~~  289 (321)
                      +.+. .+++|++|++.|..          +               ..+.++..++.  +|+|+.++....
T Consensus       123 ~~~~-~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~  191 (346)
T 3kvo_A          123 AIKK-FGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLN  191 (346)
T ss_dssp             HHHH-HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCC
T ss_pred             HHHH-cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHH
Confidence            4333 24799999999841          1               23444455543  489999986543

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=96.95  E-value=0.0034  Score=53.81  Aligned_cols=81  Identities=15%  Similarity=0.143  Sum_probs=53.8

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCCe-EEecCC-CcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      .++++||+|+ +++|...++.+...|+ +|++++++.++.+.+.    +.+... .+..+- +..+..+.+.++.+.  +
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~--g   82 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH--A   82 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH--S
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh--C
Confidence            4788999998 9999999999999999 6888888877654332    234321 222221 223334444444433  6


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|++.|.
T Consensus        83 ~id~lv~nAg~   93 (252)
T 3h7a_A           83 PLEVTIFNVGA   93 (252)
T ss_dssp             CEEEEEECCCC
T ss_pred             CceEEEECCCc
Confidence            79999999984

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=96.94  E-value=0.0073  Score=52.20  Aligned_cols=101  Identities=18%  Similarity=0.137  Sum_probs=62.6

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCC-CcccHHHHHHHHHHHhCCCccEE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~-~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.++++.++     .+.-...+..+- +.++..+.+.+..+. .+++|++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~-----~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~G~iDil   82 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGA-QVLTTARARPE-----GLPEELFVEADLTTKEGCAIVAEATRQR-LGGVDVI   82 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTC-EEEEEESSCCT-----TSCTTTEEECCTTSHHHHHHHHHHHHHH-TSSCSEE
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCC-EEEEEECCchh-----CCCcEEEEEcCCCCHHHHHHHHHHHHHH-cCCCCEE
Confidence            5889999998 9999999999999999 67777776432     111111222111 223333334444332 4679999


Q ss_pred             EEcCCCH---------------------------HHHHHHHHHc--ccCCEEEEEcCCC
Q 020768          259 FDCAGFN---------------------------KTMSTALSAT--RAGGKVCLVGMGH  288 (321)
Q Consensus       259 id~~g~~---------------------------~~~~~~~~~l--~~~G~~v~~g~~~  288 (321)
                      +++.|..                           ...+.++..+  +.+|+++.+++..
T Consensus        83 VnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~  141 (261)
T 4h15_A           83 VHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQ  141 (261)
T ss_dssp             EECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred             EECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehh
Confidence            9988731                           0234445555  3368999998643

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=96.94  E-value=0.014  Score=49.72  Aligned_cols=106  Identities=21%  Similarity=0.216  Sum_probs=63.4

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCCh--hHHHHHHHc--CCC-eEEecCCC-c-ccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD--YRLSVAKEL--GAD-NIVKVSTN-L-QDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~--~~~~~~~~~--g~~-~vi~~~~~-~-~~~~~~~~~~~~~~~  252 (321)
                      .+.++||+|+ |++|...++.+...|+++|++++++.  +..+.+++.  +.. ..+..+-. . .+..+.+.++.+. .
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   82 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ-L   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH-H
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHh-c
Confidence            4678999998 99999999999999996477777665  333333332  211 12222222 1 2333444444332 2


Q ss_pred             CCccEEEEcCCCH--H---------------HHHHHHHHccc-----CCEEEEEcCC
Q 020768          253 TGIDVSFDCAGFN--K---------------TMSTALSATRA-----GGKVCLVGMG  287 (321)
Q Consensus       253 ~~~d~vid~~g~~--~---------------~~~~~~~~l~~-----~G~~v~~g~~  287 (321)
                      +++|++|.+.|..  +               ..+.++..+..     +|+++.+++.
T Consensus        83 g~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~  139 (254)
T 1sby_A           83 KTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSV  139 (254)
T ss_dssp             SCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCG
T ss_pred             CCCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECch
Confidence            4799999998831  1               23344444432     5899999864

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=96.93  E-value=0.0064  Score=52.06  Aligned_cols=82  Identities=21%  Similarity=0.268  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhH--HHHHHHcCCCeE-EecCC-CcccHHHHHHHHHHHhCCCc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYR--LSVAKELGADNI-VKVST-NLQDIAEEVEKIQKAMGTGI  255 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~--~~~~~~~g~~~v-i~~~~-~~~~~~~~~~~~~~~~~~~~  255 (321)
                      .++++||+|+ |++|...++.+...|+ .|+++++++++  .+.+++.+.... +..+- +..+..+.+.++.+. .+++
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~g~i   80 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGA-NIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAERE-FGGV   80 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHH-HSSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHH-cCCC
Confidence            3678999998 9999999999989999 67777776541  122223343322 22221 122333334433332 2479


Q ss_pred             cEEEEcCCC
Q 020768          256 DVSFDCAGF  264 (321)
Q Consensus       256 d~vid~~g~  264 (321)
                      |++|++.|.
T Consensus        81 d~lv~~Ag~   89 (255)
T 2q2v_A           81 DILVNNAGI   89 (255)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999873

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=96.93  E-value=0.011  Score=51.10  Aligned_cols=82  Identities=15%  Similarity=0.212  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC---ChhHHHHHHHHHHcCCCeEEEEeCChh---HHHHH-HHcCCCeEEecCCC-cccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVDDY---RLSVA-KELGADNIVKVSTN-LQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga---g~vG~~a~qla~~~g~~~vv~v~~~~~---~~~~~-~~~g~~~vi~~~~~-~~~~~~~~~~~~~~~~  252 (321)
                      .++++||+|+   |++|...++.+...|+ .|++++++.+   ..+.+ ++.+....+..+-. ..+..+.+.++.+. .
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~   82 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD-L   82 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH-T
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            4688999986   6999999999988998 6777777764   33323 23342223322222 22333333333332 3


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      +++|++|++.|.
T Consensus        83 g~id~lv~nAg~   94 (275)
T 2pd4_A           83 GSLDFIVHSVAF   94 (275)
T ss_dssp             SCEEEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            579999999873

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=96.93  E-value=0.0062  Score=52.81  Aligned_cols=83  Identities=16%  Similarity=0.245  Sum_probs=53.8

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-H---HcCCCe-EEecCC-CcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-K---ELGADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~---~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      .+.++||+|+ |++|...++.+...|+ .|+++++++++.+.+ +   +.+... .+..+- +..+..+.+.++.+..++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   98 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   98 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999998 9999999999999999 688888887765433 2   234332 222221 222333334444333226


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|++.|.
T Consensus        99 ~id~lv~nAg~  109 (273)
T 1ae1_A           99 KLNILVNNAGV  109 (273)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCcEEEECCCC
Confidence            79999999884

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=96.93  E-value=0.0064  Score=52.55  Aligned_cols=83  Identities=22%  Similarity=0.390  Sum_probs=51.9

Q ss_pred             CCCEEEEEcC---ChhHHHHHHHHHHcCCCeEEEEeCChhH--HHHHHHcCCC-eEEecCC-CcccHHHHHHHHHHHhC-
Q 020768          181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVDDYR--LSVAKELGAD-NIVKVST-NLQDIAEEVEKIQKAMG-  252 (321)
Q Consensus       181 ~g~~vlI~Ga---g~vG~~a~qla~~~g~~~vv~v~~~~~~--~~~~~~~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~-  252 (321)
                      .++++||+|+   +++|...++.+...|+ .|++++++.++  .+..++++.. ..+..+- +.++..+.+.++.+..+ 
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   84 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA   84 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4688999984   8999999999989999 67777777654  2333445432 1222222 22333344444433323 


Q ss_pred             -CCccEEEEcCCC
Q 020768          253 -TGIDVSFDCAGF  264 (321)
Q Consensus       253 -~~~d~vid~~g~  264 (321)
                       .++|++|++.|.
T Consensus        85 ~~~iD~lv~nAg~   97 (269)
T 2h7i_A           85 GNKLDGVVHSIGF   97 (269)
T ss_dssp             TCCEEEEEECCCC
T ss_pred             CCCceEEEECCcc
Confidence             279999999873

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.93  E-value=0.0091  Score=51.41  Aligned_cols=82  Identities=18%  Similarity=0.208  Sum_probs=53.1

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-H---HcCCCe--EEecCC-CcccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-K---ELGADN--IVKVST-NLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~---~~g~~~--vi~~~~-~~~~~~~~~~~~~~~~~  252 (321)
                      .|+++||+|+ +++|...++.+...|+ .|++++++.++.+.+ +   +.+...  .+..+- +..+..+.+.++.+. .
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~   86 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEE-F   86 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHH-h
Confidence            4789999998 9999999999999999 688888887765543 2   233122  222221 222333334443332 3


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      +++|++|++.|.
T Consensus        87 g~id~lvnnAg~   98 (262)
T 3pk0_A           87 GGIDVVCANAGV   98 (262)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            579999999883

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=96.93  E-value=0.0075  Score=51.78  Aligned_cols=82  Identities=21%  Similarity=0.225  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhH-HHH-HHHc----CCCe-EEecCC-CcccHHHHHHHHHHHh
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYR-LSV-AKEL----GADN-IVKVST-NLQDIAEEVEKIQKAM  251 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~-~~~-~~~~----g~~~-vi~~~~-~~~~~~~~~~~~~~~~  251 (321)
                      .++++||+|+ |++|...++.+...|+ .|+++++++++ .+. .+++    +... .+..+- +..+..+.+.++.+. 
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-   80 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ-   80 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHh-
Confidence            4678999998 9999999999999999 67888777665 433 2222    4332 221121 122333334433332 


Q ss_pred             CCCccEEEEcCCC
Q 020768          252 GTGIDVSFDCAGF  264 (321)
Q Consensus       252 ~~~~d~vid~~g~  264 (321)
                      .+++|++|++.|.
T Consensus        81 ~g~iD~lv~~Ag~   93 (260)
T 1x1t_A           81 MGRIDILVNNAGI   93 (260)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2479999999873

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=96.92  E-value=0.015  Score=50.41  Aligned_cols=106  Identities=19%  Similarity=0.290  Sum_probs=64.7

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCC------------hhHHHH----HHHcCCCeE-EecCC-CcccHH
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD------------DYRLSV----AKELGADNI-VKVST-NLQDIA  241 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~------------~~~~~~----~~~~g~~~v-i~~~~-~~~~~~  241 (321)
                      .|+++||+|+ +++|...++.+...|+ .|++++++            .++.+.    +++.+.... +..+- +..+..
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   90 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGA-DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLS   90 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            5789999998 9999999999999999 57777765            333332    233444322 22221 222333


Q ss_pred             HHHHHHHHHhCCCccEEEEcCCCH------H---------------HHHHHHHHcc---cCCEEEEEcCCC
Q 020768          242 EEVEKIQKAMGTGIDVSFDCAGFN------K---------------TMSTALSATR---AGGKVCLVGMGH  288 (321)
Q Consensus       242 ~~~~~~~~~~~~~~d~vid~~g~~------~---------------~~~~~~~~l~---~~G~~v~~g~~~  288 (321)
                      +.+.++.+. .+++|++|++.|-.      +               ..+.++..+.   .+|+++.+++..
T Consensus        91 ~~~~~~~~~-~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~  160 (278)
T 3sx2_A           91 AALQAGLDE-LGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSA  160 (278)
T ss_dssp             HHHHHHHHH-HCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGG
T ss_pred             HHHHHHHHH-cCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHH
Confidence            344444333 35799999998842      1               2334444443   268999998643

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.92  E-value=0.0041  Score=53.43  Aligned_cols=92  Identities=21%  Similarity=0.315  Sum_probs=58.3

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh-------------------hHHHHH----HHcCCC-eEEecCCCc
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-------------------YRLSVA----KELGAD-NIVKVSTNL  237 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~-------------------~~~~~~----~~~g~~-~vi~~~~~~  237 (321)
                      +.+|+|+|+|++|..+++.+...|...+..++.+.                   .|.+.+    +++... .+..+....
T Consensus        31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~  110 (249)
T 1jw9_B           31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL  110 (249)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred             CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccC
Confidence            46899999999999999999999998888888876                   555433    233333 222222111


Q ss_pred             ccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCC
Q 020768          238 QDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGG  279 (321)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G  279 (321)
                       + .+.+.++.    .++|+||+|+.+.+.-..+.+.+...|
T Consensus       111 -~-~~~~~~~~----~~~DvVi~~~d~~~~~~~l~~~~~~~~  146 (249)
T 1jw9_B          111 -D-DAELAALI----AEHDLVLDCTDNVAVRNQLNAGCFAAK  146 (249)
T ss_dssp             -C-HHHHHHHH----HTSSEEEECCSSHHHHHHHHHHHHHHT
T ss_pred             -C-HhHHHHHH----hCCCEEEEeCCCHHHHHHHHHHHHHcC
Confidence             1 11222322    368999999998765444444444444

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=96.91  E-value=0.011  Score=49.26  Aligned_cols=92  Identities=14%  Similarity=0.147  Sum_probs=61.4

Q ss_pred             EEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcC
Q 020768          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (321)
Q Consensus       184 ~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  262 (321)
                      +|||+|+ |.+|...+..+...|. .|++++++.++.+.+..-++.. +..+-.+.+.    ..+     .++|+||.+.
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~-~~~D~~d~~~----~~~-----~~~d~vi~~a   70 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGH-EVLAVVRDPQKAADRLGATVAT-LVKEPLVLTE----ADL-----DSVDAVVDAL   70 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHTCTTSEE-EECCGGGCCH----HHH-----TTCSEEEECC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEecccccccccCCCceE-EecccccccH----hhc-----ccCCEEEECC
Confidence            5899999 9999999999999998 7888888887766554334432 2222111221    221     4799999999


Q ss_pred             CCH----------HHHHHHHHHccc-CCEEEEEcC
Q 020768          263 GFN----------KTMSTALSATRA-GGKVCLVGM  286 (321)
Q Consensus       263 g~~----------~~~~~~~~~l~~-~G~~v~~g~  286 (321)
                      |..          .....+++.++. +++++.+++
T Consensus        71 g~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS  105 (224)
T 3h2s_A           71 SVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILG  105 (224)
T ss_dssp             CCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred             ccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEec
Confidence            862          233455666543 478888864

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=96.91  E-value=0.0024  Score=55.35  Aligned_cols=81  Identities=17%  Similarity=0.149  Sum_probs=51.9

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCC-CcccHHHHHHHHHHHhCCCccEE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~-~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      .++++||+|+ |++|...++.+...|+ .|++++++.++.+.+..-.. ..+..+- +..+..+.+.++.+. .+++|++
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~~~~~-~g~iD~l   91 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGH-PLLLLARRVERLKALNLPNT-LCAQVDVTDKYTFDTAITRAEKI-YGPADAI   91 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHTTCCTTE-EEEECCTTCHHHHHHHHHHHHHH-HCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHhhcCCc-eEEEecCCCHHHHHHHHHHHHHH-CCCCCEE
Confidence            4678999998 9999999999999999 57888888766543321111 1222221 222333334444332 3579999


Q ss_pred             EEcCCC
Q 020768          259 FDCAGF  264 (321)
Q Consensus       259 id~~g~  264 (321)
                      |++.|.
T Consensus        92 vnnAg~   97 (266)
T 3p19_A           92 VNNAGM   97 (266)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999984

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=96.89  E-value=0.0091  Score=50.78  Aligned_cols=82  Identities=23%  Similarity=0.352  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeC-ChhHHHHH----HHcCCCe-EEecCC-CcccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV-DDYRLSVA----KELGADN-IVKVST-NLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~-~~~~~~~~----~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~  252 (321)
                      .++++||+|+ |++|...++.+...|+ .|+++++ ++++.+.+    ++.+... .+..+- +..+..+.+.++.+. .
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   80 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGA-NVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDV-F   80 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            4678999998 9999999999999999 5777766 66554432    2234332 222221 222333334443332 2


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      +++|++|++.|.
T Consensus        81 g~id~lv~nAg~   92 (246)
T 2uvd_A           81 GQVDILVNNAGV   92 (246)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999884

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=96.88  E-value=0.0057  Score=50.99  Aligned_cols=98  Identities=19%  Similarity=0.132  Sum_probs=62.5

Q ss_pred             CEEEEEcC-ChhHHHHHHHHH-HcCCCeEEEEeCChh-HHHHHHHcCCC-eEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768          183 TNVLIMGA-GPIGLVTMLGAR-AFGAPRIVIVDVDDY-RLSVAKELGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~-~~g~~~vv~v~~~~~-~~~~~~~~g~~-~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      ++|||+|+ |.+|...++.+. ..|+ .|++++++++ +.+.+...+.. .++..+-  .+ .+.+.++.    .++|++
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~--~d-~~~~~~~~----~~~d~v   77 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLKTRIPPEIIDHERVTVIEGSF--QN-PGXLEQAV----TNAEVV   77 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHHHHSCHHHHTSTTEEEEECCT--TC-HHHHHHHH----TTCSEE
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCccccchhhccCCCceEEEECCC--CC-HHHHHHHH----cCCCEE
Confidence            46999998 999999988888 8998 6888888877 65544322322 2222221  12 22333332    378999


Q ss_pred             EEcCCCHHH-HHHHHHHcccC--CEEEEEcCCC
Q 020768          259 FDCAGFNKT-MSTALSATRAG--GKVCLVGMGH  288 (321)
Q Consensus       259 id~~g~~~~-~~~~~~~l~~~--G~~v~~g~~~  288 (321)
                      |.+.|..+. .+.+++.++..  ++++.++...
T Consensus        78 v~~ag~~n~~~~~~~~~~~~~~~~~iv~iSs~~  110 (221)
T 3r6d_A           78 FVGAMESGSDMASIVKALSRXNIRRVIGVSMAG  110 (221)
T ss_dssp             EESCCCCHHHHHHHHHHHHHTTCCEEEEEEETT
T ss_pred             EEcCCCCChhHHHHHHHHHhcCCCeEEEEeece
Confidence            999986211 44555555443  5899888554

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=96.88  E-value=0.014  Score=50.18  Aligned_cols=82  Identities=27%  Similarity=0.342  Sum_probs=53.0

Q ss_pred             CCCEEEEEcC-C-hhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHc---CCCe--EEecCC-CcccHHHHHHHHHHHh
Q 020768          181 PETNVLIMGA-G-PIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GADN--IVKVST-NLQDIAEEVEKIQKAM  251 (321)
Q Consensus       181 ~g~~vlI~Ga-g-~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~---g~~~--vi~~~~-~~~~~~~~~~~~~~~~  251 (321)
                      .++++||+|+ | ++|...+..+...|+ .|++++++.++.+.+ +++   +...  .+..+- +..+..+.+.++.+. 
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-   98 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEK-   98 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHH-
Confidence            4789999998 7 799999998888999 688888887765543 223   2222  222221 223333344444333 


Q ss_pred             CCCccEEEEcCCC
Q 020768          252 GTGIDVSFDCAGF  264 (321)
Q Consensus       252 ~~~~d~vid~~g~  264 (321)
                      .+++|++|.+.|-
T Consensus        99 ~g~id~li~~Ag~  111 (266)
T 3o38_A           99 AGRLDVLVNNAGL  111 (266)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             hCCCcEEEECCCc
Confidence            3479999999984

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=96.88  E-value=0.012  Score=50.08  Aligned_cols=77  Identities=19%  Similarity=0.256  Sum_probs=50.1

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCC-CcccHHHHHHHHHHHhCCCccEE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~-~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      .+.++||+|+ |++|...+..+...|+ .|++++++.+.    ++.++ ..+..+- +.++..+.+.++.+. .+++|++
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~----~~~~~-~~~~~D~~d~~~~~~~~~~~~~~-~g~id~l   78 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGA-KVTGFDQAFTQ----EQYPF-ATEVMDVADAAQVAQVCQRLLAE-TERLDAL   78 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCCCS----SCCSS-EEEECCTTCHHHHHHHHHHHHHH-CSCCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCchhh----hcCCc-eEEEcCCCCHHHHHHHHHHHHHH-cCCCCEE
Confidence            4678999998 9999999999999999 67777777553    22342 2222222 222333334443332 4579999


Q ss_pred             EEcCCC
Q 020768          259 FDCAGF  264 (321)
Q Consensus       259 id~~g~  264 (321)
                      |++.|.
T Consensus        79 v~~Ag~   84 (250)
T 2fwm_X           79 VNAAGI   84 (250)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999884

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=96.87  E-value=0.0099  Score=51.11  Aligned_cols=108  Identities=14%  Similarity=0.139  Sum_probs=67.1

Q ss_pred             CCCCCEEEEEcC---ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCeEEecCCC-cccHHHHHHHHHHH
Q 020768          179 IGPETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNIVKVSTN-LQDIAEEVEKIQKA  250 (321)
Q Consensus       179 ~~~g~~vlI~Ga---g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~vi~~~~~-~~~~~~~~~~~~~~  250 (321)
                      ...++++||+|+   +++|...++.+...|+ .|++++++.+..+.+    ++.+....+..+-. ..+..+.+.++.+.
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   89 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTH   89 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHH
Confidence            356889999974   6999999998888999 677777765443333    33443233333222 23333344444332


Q ss_pred             hCCCccEEEEcCCCH---------------H---------------HHHHHHHHcccCCEEEEEcCCC
Q 020768          251 MGTGIDVSFDCAGFN---------------K---------------TMSTALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       251 ~~~~~d~vid~~g~~---------------~---------------~~~~~~~~l~~~G~~v~~g~~~  288 (321)
                       .+++|++|.++|..               +               ..+.++..++++|+++.+++..
T Consensus        90 -~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~  156 (271)
T 3ek2_A           90 -WDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLG  156 (271)
T ss_dssp             -CSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGG
T ss_pred             -cCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccc
Confidence             45799999998731               1               1233445566689999998543

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=96.87  E-value=0.017  Score=50.22  Aligned_cols=82  Identities=18%  Similarity=0.183  Sum_probs=51.1

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCC----------------hhHHHHH----HHcCCCe-EEecCC-Cc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD----------------DYRLSVA----KELGADN-IVKVST-NL  237 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~----------------~~~~~~~----~~~g~~~-vi~~~~-~~  237 (321)
                      .|+++||+|+ +++|...++.+...|+ +|++++++                .++.+.+    +..+... .+..+- +.
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   88 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDY   88 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCH
Confidence            5789999998 9999999999999999 67777665                4443332    2233332 222221 22


Q ss_pred             ccHHHHHHHHHHHhCCCccEEEEcCCC
Q 020768          238 QDIAEEVEKIQKAMGTGIDVSFDCAGF  264 (321)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~d~vid~~g~  264 (321)
                      .+..+.+.++.+. .+++|++|++.|.
T Consensus        89 ~~v~~~~~~~~~~-~g~id~lv~nAg~  114 (286)
T 3uve_A           89 DALKAAVDSGVEQ-LGRLDIIVANAGI  114 (286)
T ss_dssp             HHHHHHHHHHHHH-HSCCCEEEECCCC
T ss_pred             HHHHHHHHHHHHH-hCCCCEEEECCcc
Confidence            2333334444333 2479999999884

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=96.87  E-value=0.018  Score=50.21  Aligned_cols=82  Identities=17%  Similarity=0.130  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCCh-hHHHHH-H----HcCCCe-EEecCCC-----cccHHHHHHHH
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD-YRLSVA-K----ELGADN-IVKVSTN-----LQDIAEEVEKI  247 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~-~~~~~~-~----~~g~~~-vi~~~~~-----~~~~~~~~~~~  247 (321)
                      .+.++||+|+ |++|...++.+...|+ .|++++++. ++.+.+ +    +.+... .+..+-.     ..+..+.+.++
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~  100 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGY-RVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSC  100 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHH
Confidence            4678999998 9999999999888999 677777776 554322 2    234322 2222211     22333333333


Q ss_pred             HHHhCCCccEEEEcCCC
Q 020768          248 QKAMGTGIDVSFDCAGF  264 (321)
Q Consensus       248 ~~~~~~~~d~vid~~g~  264 (321)
                      .+. .+++|++|++.|.
T Consensus       101 ~~~-~g~iD~lvnnAG~  116 (288)
T 2x9g_A          101 FRA-FGRCDVLVNNASA  116 (288)
T ss_dssp             HHH-HSCCCEEEECCCC
T ss_pred             HHh-cCCCCEEEECCCC
Confidence            322 3479999999873

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=96.86  E-value=0.011  Score=50.44  Aligned_cols=82  Identities=21%  Similarity=0.241  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeC-ChhHHHHH----HHcCCCe-EEecCCC-cccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV-DDYRLSVA----KELGADN-IVKVSTN-LQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~-~~~~~~~~----~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~  252 (321)
                      .+.++||+|+ |++|...++.+...|+ .|+++++ +.++.+.+    ++.+... .+..+-. ..+..+.+.++.+. .
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   83 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE-F   83 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH-c
Confidence            4678999998 9999999998888999 5777777 65554332    2234321 2222211 22333333333322 2


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      +++|++|.+.|.
T Consensus        84 g~id~li~~Ag~   95 (261)
T 1gee_A           84 GKLDVMINNAGL   95 (261)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999873

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=96.85  E-value=0.011  Score=50.77  Aligned_cols=82  Identities=15%  Similarity=0.287  Sum_probs=50.6

Q ss_pred             CCCEEEEEcC---ChhHHHHHHHHHHcCCCeEEEEeCChh---HHHHH-HHcCCCeEEecCCCc-ccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVDDY---RLSVA-KELGADNIVKVSTNL-QDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga---g~vG~~a~qla~~~g~~~vv~v~~~~~---~~~~~-~~~g~~~vi~~~~~~-~~~~~~~~~~~~~~~  252 (321)
                      .++++||+|+   |++|...++.+...|+ .|++++++++   ..+.+ ++.+....+..+-.+ .+..+.+.++.+. .
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~   84 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEA-F   84 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHH-c
Confidence            4678999986   6999999988888898 6777777764   22222 233432333322222 2333333433332 2


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      +++|++|++.|.
T Consensus        85 g~iD~lv~~Ag~   96 (261)
T 2wyu_A           85 GGLDYLVHAIAF   96 (261)
T ss_dssp             SSEEEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=96.84  E-value=0.024  Score=49.35  Aligned_cols=82  Identities=18%  Similarity=0.235  Sum_probs=50.6

Q ss_pred             CCCEEEEEcC---ChhHHHHHHHHHHcCCCeEEEEeCChh---HHHHH-HHcCCCeEEecCCC-cccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVDDY---RLSVA-KELGADNIVKVSTN-LQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga---g~vG~~a~qla~~~g~~~vv~v~~~~~---~~~~~-~~~g~~~vi~~~~~-~~~~~~~~~~~~~~~~  252 (321)
                      .|+++||+|+   |++|...++.+...|+ .|++++++.+   ..+.+ .+.+....+..+-. ..+..+.+.++.+. .
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~   97 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGA-QLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEEN-W   97 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH-T
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            4788999986   5999999998888998 6777777764   22222 23342223322222 22333333443332 3


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      +++|++|.+.|.
T Consensus        98 g~iD~lv~~Ag~  109 (285)
T 2p91_A           98 GSLDIIVHSIAY  109 (285)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            579999999873

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=96.83  E-value=0.0087  Score=51.54  Aligned_cols=82  Identities=18%  Similarity=0.235  Sum_probs=50.1

Q ss_pred             CCCEEEEEcC---ChhHHHHHHHHHHcCCCeEEEEeCCh---hHHHHH-HHcCCCeEEecCCCc-ccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVDD---YRLSVA-KELGADNIVKVSTNL-QDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga---g~vG~~a~qla~~~g~~~vv~v~~~~---~~~~~~-~~~g~~~vi~~~~~~-~~~~~~~~~~~~~~~  252 (321)
                      .++++||+|+   |++|...++.+...|+ .|++++++.   +..+.+ ++.+....+..+-.+ ++..+.+.++.+ ..
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~~   85 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGK-VW   85 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHT-TC
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHH-Hc
Confidence            4678999986   5999999999888999 577777765   223322 233433333322222 233333333332 23


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      +++|++|.+.|.
T Consensus        86 g~iD~lv~~Ag~   97 (265)
T 1qsg_A           86 PKFDGFVHSIGF   97 (265)
T ss_dssp             SSEEEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            579999999873

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=96.83  E-value=0.014  Score=50.46  Aligned_cols=82  Identities=20%  Similarity=0.233  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeC-ChhHHHH----HHHcCCCe-EEecCC-CcccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV-DDYRLSV----AKELGADN-IVKVST-NLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~-~~~~~~~----~~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~  252 (321)
                      .++++||+|+ +++|...++.+...|+ .|+++++ +.++.+.    +++.+... .+..+- +..+..+.+.++.+. .
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~-~  104 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGA-KVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIER-W  104 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH-c
Confidence            4788999998 9999999999989999 5666655 5444332    23344332 222222 222333334444333 3


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      +++|++|++.|.
T Consensus       105 g~id~lv~nAg~  116 (269)
T 4dmm_A          105 GRLDVLVNNAGI  116 (269)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            579999999875

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=96.83  E-value=0.0086  Score=50.80  Aligned_cols=82  Identities=20%  Similarity=0.245  Sum_probs=53.7

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCC--CeEEecCC--C-cccHHHHHHHHHHH
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGA--DNIVKVST--N-LQDIAEEVEKIQKA  250 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~--~~vi~~~~--~-~~~~~~~~~~~~~~  250 (321)
                      .|+++||+|+ |++|...+..+...|+ .|+.++++.++.+.+.    +.+.  ..++..+-  . ..+..+.+.++.+.
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~   91 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE   91 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence            5789999998 9999999999999999 6888888877655432    3332  22332222  2 22333333443332


Q ss_pred             hCCCccEEEEcCCC
Q 020768          251 MGTGIDVSFDCAGF  264 (321)
Q Consensus       251 ~~~~~d~vid~~g~  264 (321)
                       .+++|++|.+.|.
T Consensus        92 -~g~id~lv~nAg~  104 (247)
T 3i1j_A           92 -FGRLDGLLHNASI  104 (247)
T ss_dssp             -HSCCSEEEECCCC
T ss_pred             -CCCCCEEEECCcc
Confidence             3479999999884

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=96.82  E-value=0.025  Score=49.38  Aligned_cols=81  Identities=19%  Similarity=0.094  Sum_probs=52.7

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEe-CChhHHHHH-H----HcCCCe-EE--ecCCCcc------------
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVD-VDDYRLSVA-K----ELGADN-IV--KVSTNLQ------------  238 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~-~~~~~~~~~-~----~~g~~~-vi--~~~~~~~------------  238 (321)
                      .+.++||+|+ +++|...++.+...|+ .|++++ ++.++.+.+ +    +.+... .+  |+.+ ..            
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~   85 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN-VATAPVSGADGSAP   85 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSS-SCBCCCC----CCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCC-cccccccccccccc
Confidence            4678999998 9999999999999999 688887 777665433 2    234322 22  2222 22            


Q ss_pred             -----cHHHHHHHHHHHhCCCccEEEEcCCC
Q 020768          239 -----DIAEEVEKIQKAMGTGIDVSFDCAGF  264 (321)
Q Consensus       239 -----~~~~~~~~~~~~~~~~~d~vid~~g~  264 (321)
                           +..+.+.++.+. .+++|++|++.|.
T Consensus        86 ~~~~~~v~~~~~~~~~~-~g~iD~lvnnAg~  115 (291)
T 1e7w_A           86 VTLFTRCAELVAACYTH-WGRCDVLVNNASS  115 (291)
T ss_dssp             BCHHHHHHHHHHHHHHH-HSCCCEEEECCCC
T ss_pred             cchHHHHHHHHHHHHHh-cCCCCEEEECCCC
Confidence                 344444444332 3579999999974

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=96.82  E-value=0.0067  Score=52.04  Aligned_cols=81  Identities=28%  Similarity=0.337  Sum_probs=53.7

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-Hc---CCCe-EEecCC-CcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-EL---GADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~---g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      .++++||+|+ +++|...++.+...|+ .|++++++.++.+.+. ++   +... .+..+- +..+..+.+.++.+. .+
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g   82 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEK-FG   82 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence            4788999998 9999999999999999 6888888887766543 33   2221 222221 222333344444332 35


Q ss_pred             CccEEEEcCC
Q 020768          254 GIDVSFDCAG  263 (321)
Q Consensus       254 ~~d~vid~~g  263 (321)
                      ++|++|++.|
T Consensus        83 ~id~lv~nAg   92 (257)
T 3imf_A           83 RIDILINNAA   92 (257)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999998

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=96.82  E-value=0.021  Score=49.48  Aligned_cols=82  Identities=23%  Similarity=0.238  Sum_probs=50.9

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeC-------------ChhHHHH----HHHcCCCeE-EecCC-CcccH
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV-------------DDYRLSV----AKELGADNI-VKVST-NLQDI  240 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~-------------~~~~~~~----~~~~g~~~v-i~~~~-~~~~~  240 (321)
                      .|+++||+|+ +++|...++.+...|+ .|+++++             +.++.+.    ++..+.... +..+- +..+.
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRL   88 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            5789999998 9999999999999999 6777766             3444332    223343322 22221 22233


Q ss_pred             HHHHHHHHHHhCCCccEEEEcCCC
Q 020768          241 AEEVEKIQKAMGTGIDVSFDCAGF  264 (321)
Q Consensus       241 ~~~~~~~~~~~~~~~d~vid~~g~  264 (321)
                      .+.+.++.+. .+++|++|++.|.
T Consensus        89 ~~~~~~~~~~-~g~id~lvnnAg~  111 (277)
T 3tsc_A           89 RKVVDDGVAA-LGRLDIIVANAGV  111 (277)
T ss_dssp             HHHHHHHHHH-HSCCCEEEECCCC
T ss_pred             HHHHHHHHHH-cCCCCEEEECCCC
Confidence            3334443332 2579999999884

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=96.81  E-value=0.0089  Score=50.96  Aligned_cols=82  Identities=18%  Similarity=0.229  Sum_probs=53.5

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-H---cCCCe-EEecCC-CcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-E---LGADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~---~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      .++++||+|+ +++|...++.+...|+ .|++++++.++.+.+. +   .+... .+..+- +..+..+.+.++.+. .+
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g   85 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAE-FG   85 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence            4789999998 9999999999999999 6888888877655432 2   23221 222222 122333333443332 34


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|.+.|-
T Consensus        86 ~id~li~~Ag~   96 (253)
T 3qiv_A           86 GIDYLVNNAAI   96 (253)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999875

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=96.81  E-value=0.013  Score=50.30  Aligned_cols=76  Identities=18%  Similarity=0.214  Sum_probs=49.4

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCC-CcccHHHHHHHHHHHhCCCccEE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~-~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      .++++||+|+ |++|...++.+...|+ .|++++++.++.+.      ...+..+- +.++..+.+.++.+. .+++|++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~------~~~~~~Dl~d~~~v~~~~~~~~~~-~g~iD~l   91 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGD-KVAITYRSGEPPEG------FLAVKCDITDTEQVEQAYKEIEET-HGPVEVL   91 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTT------SEEEECCTTSHHHHHHHHHHHHHH-TCSCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHhhcc------ceEEEecCCCHHHHHHHHHHHHHH-cCCCCEE
Confidence            3678999998 9999999999999998 67777776654321      12222221 222333334443332 4579999


Q ss_pred             EEcCCC
Q 020768          259 FDCAGF  264 (321)
Q Consensus       259 id~~g~  264 (321)
                      |++.|.
T Consensus        92 v~nAg~   97 (253)
T 2nm0_A           92 IANAGV   97 (253)
T ss_dssp             EEECSC
T ss_pred             EECCCC
Confidence            998874

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=96.81  E-value=0.0099  Score=51.67  Aligned_cols=82  Identities=21%  Similarity=0.304  Sum_probs=53.4

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCC-eEEecCC-CcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGAD-NIVKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      .|+++||+|+ +++|...++.+...|+ .|++++++.++.+.+    ++.+.. ..+..+- +.++..+.+.++.+. .+
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~-~g  108 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGE-LG  108 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence            4789999998 9999999999999999 688888887664433    233322 2222222 223333444444333 24


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|++.|.
T Consensus       109 ~iD~lvnnAg~  119 (276)
T 3r1i_A          109 GIDIAVCNAGI  119 (276)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999884

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=96.80  E-value=0.0037  Score=50.55  Aligned_cols=104  Identities=16%  Similarity=0.217  Sum_probs=67.9

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHH
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      +-...++++++||=+|+|. |..+..+++. +. .|++++.+++..+.+++    .+.+.+-.......++.    .   
T Consensus        15 ~l~~~~~~~~~vLDiGcG~-G~~~~~la~~-~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~----~---   84 (185)
T 3mti_A           15 FLAEVLDDESIVVDATMGN-GNDTAFLAGL-SK-KVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLD----H---   84 (185)
T ss_dssp             HHHTTCCTTCEEEESCCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGG----G---
T ss_pred             HHHHhCCCCCEEEEEcCCC-CHHHHHHHHh-CC-EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHH----h---
Confidence            3345678999999888865 7788888887 65 79999999988777654    34433222112211111    1   


Q ss_pred             HhCCCccEEEEcCCC-----------H----HHHHHHHHHcccCCEEEEEcCC
Q 020768          250 AMGTGIDVSFDCAGF-----------N----KTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       250 ~~~~~~d~vid~~g~-----------~----~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      .....+|+|+-..+-           .    ..+..+.+.|++||+++++...
T Consensus        85 ~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~  137 (185)
T 3mti_A           85 YVREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY  137 (185)
T ss_dssp             TCCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred             hccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence            114569999865321           1    3457888999999999888654

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=96.80  E-value=0.016  Score=49.99  Aligned_cols=81  Identities=16%  Similarity=0.208  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-H---HcCC-CeEEecCCCcccHHHHHHHHHHHhCCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-K---ELGA-DNIVKVSTNLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~---~~g~-~~vi~~~~~~~~~~~~~~~~~~~~~~~  254 (321)
                      .++++||+|+ +++|...++.+...|+ .|++++++.++.+.+ +   +.+. ..+..+..+..+ .+.+.++.+. .++
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~-~~~~~~~~~~-~g~   85 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRREENVNETIKEIRAQYPDAILQPVVADLGT-EQGCQDVIEK-YPK   85 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTS-HHHHHHHHHH-CCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCC-HHHHHHHHHh-cCC
Confidence            4688999998 9999999999889999 688888887665432 2   2221 222111111112 2223333332 357


Q ss_pred             ccEEEEcCCC
Q 020768          255 IDVSFDCAGF  264 (321)
Q Consensus       255 ~d~vid~~g~  264 (321)
                      +|+++++.|.
T Consensus        86 id~lv~nAg~   95 (267)
T 3t4x_A           86 VDILINNLGI   95 (267)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=96.80  E-value=0.021  Score=49.69  Aligned_cols=83  Identities=22%  Similarity=0.263  Sum_probs=52.5

Q ss_pred             CCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeC-ChhHHHH----HHHcCCCe-EEecCC-CcccHHHHHHHHHHHh
Q 020768          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV-DDYRLSV----AKELGADN-IVKVST-NLQDIAEEVEKIQKAM  251 (321)
Q Consensus       180 ~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~-~~~~~~~----~~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~  251 (321)
                      -.++++||+|+ +++|...++.+...|+ .|+++++ +.++.+.    +++.+... .+..+- +.++..+.+.++.+. 
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-  104 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAE-  104 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHH-
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH-
Confidence            35788999998 9999999999999999 5777664 5554332    23334332 222221 233444445554433 


Q ss_pred             CCCccEEEEcCCC
Q 020768          252 GTGIDVSFDCAGF  264 (321)
Q Consensus       252 ~~~~d~vid~~g~  264 (321)
                      .+++|++|++.|.
T Consensus       105 ~g~iD~lvnnAg~  117 (280)
T 4da9_A          105 FGRIDCLVNNAGI  117 (280)
T ss_dssp             HSCCCEEEEECC-
T ss_pred             cCCCCEEEECCCc
Confidence            3479999999985

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=96.79  E-value=0.017  Score=50.33  Aligned_cols=82  Identities=22%  Similarity=0.230  Sum_probs=52.1

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhH-----------HHHHHHcCCCe-EEecCC-CcccHHHHHHH
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYR-----------LSVAKELGADN-IVKVST-NLQDIAEEVEK  246 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~-----------~~~~~~~g~~~-vi~~~~-~~~~~~~~~~~  246 (321)
                      .++++||+|+ +++|...++.+...|+ +|++++++.++           .+.+++.+... .+..+- +.++..+.+.+
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   86 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAK   86 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            4789999998 9999999999888999 68878777652           22233444322 221121 22333334444


Q ss_pred             HHHHhCCCccEEEEcCCC
Q 020768          247 IQKAMGTGIDVSFDCAGF  264 (321)
Q Consensus       247 ~~~~~~~~~d~vid~~g~  264 (321)
                      +.+. .+++|++|++.|.
T Consensus        87 ~~~~-~g~id~lvnnAg~  103 (285)
T 3sc4_A           87 TVEQ-FGGIDICVNNASA  103 (285)
T ss_dssp             HHHH-HSCCSEEEECCCC
T ss_pred             HHHH-cCCCCEEEECCCC
Confidence            4333 3479999999884

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=96.79  E-value=0.0039  Score=53.60  Aligned_cols=84  Identities=18%  Similarity=0.297  Sum_probs=53.0

Q ss_pred             CCCCEEEEEcC-ChhHHHHHHHHHHcC---CCeEEEEeCChhHHHHHHHc---CCC-eEEecCC-CcccHHHHHHHHHHH
Q 020768          180 GPETNVLIMGA-GPIGLVTMLGARAFG---APRIVIVDVDDYRLSVAKEL---GAD-NIVKVST-NLQDIAEEVEKIQKA  250 (321)
Q Consensus       180 ~~g~~vlI~Ga-g~vG~~a~qla~~~g---~~~vv~v~~~~~~~~~~~~~---g~~-~vi~~~~-~~~~~~~~~~~~~~~  250 (321)
                      -.+.++||+|+ |++|...++.+...|   . .|++++++.++.+.++++   +.. ..+..+- +.++..+.+.++.+.
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   97 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGV   97 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCc-EEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHh
Confidence            34678999998 999999999988888   6 688888876544333332   322 2222221 223444445544433


Q ss_pred             hCC-CccEEEEcCCC
Q 020768          251 MGT-GIDVSFDCAGF  264 (321)
Q Consensus       251 ~~~-~~d~vid~~g~  264 (321)
                      .+. ++|++|.++|.
T Consensus        98 ~g~~~id~li~~Ag~  112 (267)
T 1sny_A           98 TKDQGLNVLFNNAGI  112 (267)
T ss_dssp             HGGGCCSEEEECCCC
T ss_pred             cCCCCccEEEECCCc
Confidence            332 69999999883

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=96.79  E-value=0.0082  Score=51.19  Aligned_cols=82  Identities=21%  Similarity=0.283  Sum_probs=55.3

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCeEE-ecCC-CcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIV-KVST-NLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~vi-~~~~-~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .|+++||+|+ +++|...++.+...|+ .|++++++.++.+.+ ++++..... ..+- +.++..+.+.++.+. .+++|
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~id   82 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQAL-TGGID   82 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHH-HSCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHH-CCCCC
Confidence            4789999998 9999999999999999 688888888776544 456543221 1111 122333334444332 34799


Q ss_pred             EEEEcCCC
Q 020768          257 VSFDCAGF  264 (321)
Q Consensus       257 ~vid~~g~  264 (321)
                      ++|++.|.
T Consensus        83 ~lv~nAg~   90 (247)
T 3rwb_A           83 ILVNNASI   90 (247)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999984

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=96.78  E-value=0.019  Score=53.79  Aligned_cols=82  Identities=22%  Similarity=0.300  Sum_probs=53.5

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhH---HHHHHHcCCCeEEecC-CCcccHHHHHHHHHHHhCCCc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYR---LSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGI  255 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~---~~~~~~~g~~~vi~~~-~~~~~~~~~~~~~~~~~~~~~  255 (321)
                      ++.++||+|+ |++|...++.+...|+ +|+.++++...   .+..++.+... +..+ .+..+..+.+.++.+..++.+
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga-~Vvl~~r~~~~~~l~~~~~~~~~~~-~~~Dvtd~~~v~~~~~~~~~~~g~~i  289 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGA-TVVAIDVDGAAEDLKRVADKVGGTA-LTLDVTADDAVDKITAHVTEHHGGKV  289 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECGGGHHHHHHHHHHHTCEE-EECCTTSTTHHHHHHHHHHHHSTTCC
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeE-EEEecCCHHHHHHHHHHHHHHcCCCc
Confidence            5678999988 9999999988888899 67777765432   22344556543 2222 223344444555544434459


Q ss_pred             cEEEEcCCC
Q 020768          256 DVSFDCAGF  264 (321)
Q Consensus       256 d~vid~~g~  264 (321)
                      |++|.+.|.
T Consensus       290 d~lV~nAGv  298 (454)
T 3u0b_A          290 DILVNNAGI  298 (454)
T ss_dssp             SEEEECCCC
T ss_pred             eEEEECCcc
Confidence            999999885

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=96.78  E-value=0.011  Score=51.12  Aligned_cols=82  Identities=22%  Similarity=0.235  Sum_probs=53.8

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-HcCCCeEEecCCC-cccHHHHHHHHHHHhCCCccE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~g~~~vi~~~~~-~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      .++++||+|+ |++|...++.+...|+ .|+++++++++.+.+. ++.....+..+-. .++..+.+.++.+. .+++|+
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g~iD~   85 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRR-FGRLDC   85 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHH-HSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHH-cCCCCE
Confidence            4789999998 9999999999999999 6888888877765443 4432222222222 22333333333332 257999


Q ss_pred             EEEcCCC
Q 020768          258 SFDCAGF  264 (321)
Q Consensus       258 vid~~g~  264 (321)
                      +|++.|.
T Consensus        86 lv~nAg~   92 (270)
T 1yde_A           86 VVNNAGH   92 (270)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999874

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=96.78  E-value=0.0035  Score=53.86  Aligned_cols=126  Identities=18%  Similarity=0.270  Sum_probs=75.8

Q ss_pred             CcEEECCCCCChhhhccchhhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH--
Q 020768          147 DLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE--  224 (321)
Q Consensus       147 ~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~--  224 (321)
                      ...+.+++++.+...... ........+... ++++++||-+|+|. |.+++.+++ .|. .+++++.++...+.+++  
T Consensus        88 ~~~~~l~p~~~fgtg~~~-tt~~~~~~l~~~-~~~~~~VLDiGcG~-G~l~~~la~-~g~-~v~gvDi~~~~v~~a~~n~  162 (254)
T 2nxc_A           88 EIPLVIEPGMAFGTGHHE-TTRLALKALARH-LRPGDKVLDLGTGS-GVLAIAAEK-LGG-KALGVDIDPMVLPQAEANA  162 (254)
T ss_dssp             SEEEECCCC-----CCSH-HHHHHHHHHHHH-CCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCGGGHHHHHHHH
T ss_pred             ceEEEECCCccccCCCCH-HHHHHHHHHHHh-cCCCCEEEEecCCC-cHHHHHHHH-hCC-eEEEEECCHHHHHHHHHHH
Confidence            445666666554433211 111122334333 67899999999966 777777666 577 89999999988877764  


Q ss_pred             --cCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCC---HHHHHHHHHHcccCCEEEEEcCC
Q 020768          225 --LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       225 --~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                        .+..  +....  .+..+.   +   ....+|+|+.....   ...+..+.+.|+++|++++.+..
T Consensus       163 ~~~~~~--v~~~~--~d~~~~---~---~~~~fD~Vv~n~~~~~~~~~l~~~~~~LkpgG~lils~~~  220 (254)
T 2nxc_A          163 KRNGVR--PRFLE--GSLEAA---L---PFGPFDLLVANLYAELHAALAPRYREALVPGGRALLTGIL  220 (254)
T ss_dssp             HHTTCC--CEEEE--SCHHHH---G---GGCCEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             HHcCCc--EEEEE--CChhhc---C---cCCCCCEEEECCcHHHHHHHHHHHHHHcCCCCEEEEEeec
Confidence              3443  11111  222221   1   13579999975432   24577888999999999998744

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=96.78  E-value=0.0051  Score=52.22  Aligned_cols=103  Identities=24%  Similarity=0.342  Sum_probs=63.1

Q ss_pred             CCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCC-cccHHHHHHHHHHHhC-CCcc
Q 020768          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTN-LQDIAEEVEKIQKAMG-TGID  256 (321)
Q Consensus       180 ~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~-~~~~~~~~~~~~~~~~-~~~d  256 (321)
                      ..+.++||+|+ |++|...++.+...|+ .|+++++++++.+     +....+..+-. .++..+.+.++.+..+ +++|
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD   78 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVD   78 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCChhhcc-----CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence            45789999998 9999999999998998 6888877765432     10111111111 1222333333333322 5799


Q ss_pred             EEEEcCCC--------H---H---------------HHHHHHHHcccCCEEEEEcCCC
Q 020768          257 VSFDCAGF--------N---K---------------TMSTALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       257 ~vid~~g~--------~---~---------------~~~~~~~~l~~~G~~v~~g~~~  288 (321)
                      ++|++.|.        .   +               ..+.++..++.+|+++.+++..
T Consensus        79 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~  136 (241)
T 1dhr_A           79 AILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKA  136 (241)
T ss_dssp             EEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred             EEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHH
Confidence            99999883        1   0               1234445565679999998643

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=96.77  E-value=0.011  Score=51.70  Aligned_cols=82  Identities=21%  Similarity=0.276  Sum_probs=54.0

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHc---CCCe-EEecCC-CcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~---g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      .++++||+|+ +++|...++.+...|+ .|++++++.++.+.+ +++   +... .+..+- +..+..+.+.++.+. .+
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g  104 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLK-FG  104 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-hC
Confidence            4789999998 9999999999999999 688888887765543 333   3222 222222 222333344444332 35


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|.+.|.
T Consensus       105 ~iD~lVnnAg~  115 (283)
T 3v8b_A          105 HLDIVVANAGI  115 (283)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999884

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=96.77  E-value=0.012  Score=49.91  Aligned_cols=82  Identities=22%  Similarity=0.253  Sum_probs=53.6

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCe-EEecCC-CcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      .++++||+|+ |++|...++.+...|+ +|+.++++.++.+.+    ++.+... .+..+- +..+..+.+.++.+ ..+
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~   81 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKA-ENL   81 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH-TTC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH-HcC
Confidence            4678999998 9999999999889999 688888887665543    2334332 222222 22233333444433 245


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|.+.|.
T Consensus        82 ~id~li~~Ag~   92 (247)
T 3lyl_A           82 AIDILVNNAGI   92 (247)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999884

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=96.76  E-value=0.0089  Score=52.25  Aligned_cols=79  Identities=25%  Similarity=0.406  Sum_probs=53.7

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-HcCCCe-EEecCCCcccHHHHHHHHHHHhCCCccE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADN-IVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~g~~~-vi~~~~~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      .|+++||+|+ |++|...++.+...|+ .|++++++.++.+.+. +++... .+..+  -.+. +.++++.+.. +++|+
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D--l~d~-~~v~~~~~~~-~~iD~   89 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGA-TVIMAVRDTRKGEAAARTMAGQVEVRELD--LQDL-SSVRRFADGV-SGADV   89 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTSSSEEEEEECC--TTCH-HHHHHHHHTC-CCEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCeeEEEcC--CCCH-HHHHHHHHhc-CCCCE
Confidence            5789999998 9999999999999998 6888888888776554 444321 22222  1222 2344443322 57899


Q ss_pred             EEEcCCC
Q 020768          258 SFDCAGF  264 (321)
Q Consensus       258 vid~~g~  264 (321)
                      +|.++|-
T Consensus        90 lv~nAg~   96 (291)
T 3rd5_A           90 LINNAGI   96 (291)
T ss_dssp             EEECCCC
T ss_pred             EEECCcC
Confidence            9999884

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=96.75  E-value=0.016  Score=50.32  Aligned_cols=82  Identities=22%  Similarity=0.246  Sum_probs=53.1

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HH---cCCCe-EEecCC-CcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~---~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      .++++||+|+ |++|...+..+...|+ .|+++++++++.+.+ ++   .+... .+..+- +..+..+.+.++.+. .+
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g   98 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVER-YG   98 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-TC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH-hC
Confidence            4689999998 9999999999999999 688888887665432 22   34332 222221 222333334443332 35


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|++.|.
T Consensus        99 ~iD~lv~~Ag~  109 (277)
T 2rhc_B           99 PVDVLVNNAGR  109 (277)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=96.75  E-value=0.0099  Score=50.88  Aligned_cols=82  Identities=26%  Similarity=0.282  Sum_probs=53.9

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCe-EEecCC-CcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .++++||+|+ |++|...++.+...|+ .|+++++++++.+.+ ++++... .+..+- +.++..+.+.++.+. .+++|
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~iD   81 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREE-FGSVD   81 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHH-HSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHH-cCCCC
Confidence            4688999998 9999999999999999 688888887766544 4444321 222221 222333344443332 24799


Q ss_pred             EEEEcCCC
Q 020768          257 VSFDCAGF  264 (321)
Q Consensus       257 ~vid~~g~  264 (321)
                      ++|++.|.
T Consensus        82 ~lv~nAg~   89 (254)
T 1hdc_A           82 GLVNNAGI   89 (254)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.74  E-value=0.0038  Score=52.82  Aligned_cols=100  Identities=18%  Similarity=0.286  Sum_probs=62.0

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCC-cccHHHHHHHHHHHhC-CCccEE
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTN-LQDIAEEVEKIQKAMG-TGIDVS  258 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~-~~~~~~~~~~~~~~~~-~~~d~v  258 (321)
                      +.++||+|+ |++|...++.+...|+ .|+++++++++.+     +....+..+-. .++..+.+.++.+..+ +++|++
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~l   76 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQA-----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   76 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTS-----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecCccccc-----cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence            568999998 9999999999999998 6888877765532     10111111111 1222223333333222 579999


Q ss_pred             EEcCCC--------HH------------------HHHHHHHHcccCCEEEEEcCC
Q 020768          259 FDCAGF--------NK------------------TMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       259 id~~g~--------~~------------------~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      |++.|.        ..                  ..+.++..++.+|+++.+++.
T Consensus        77 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~  131 (236)
T 1ooe_A           77 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAA  131 (236)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred             EECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECch
Confidence            999983        11                  134455666667999999864

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=96.74  E-value=0.014  Score=50.34  Aligned_cols=100  Identities=16%  Similarity=0.184  Sum_probs=62.1

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCC-CcccHHHHHHHHHHHhCCCccEE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~-~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      .+.++||+|+ |++|...++.+...|+ .|+++++++++     .-.+ ..+..+- +..+..+.+.++.+. .+++|++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~-----~~~~-~~~~~Dl~~~~~v~~~~~~~~~~-~g~iD~l   78 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGS-KVIDLSIHDPG-----EAKY-DHIECDVTNPDQVKASIDHIFKE-YGSISVL   78 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSCCC-----SCSS-EEEECCTTCHHHHHHHHHHHHHH-HSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEecCccc-----CCce-EEEEecCCCHHHHHHHHHHHHHH-cCCCCEE
Confidence            4678999998 9999999999999999 67777777654     1111 2222221 222333334443332 2479999


Q ss_pred             EEcCCCH----------H---------------HHHHHHHHcc--cCCEEEEEcCCC
Q 020768          259 FDCAGFN----------K---------------TMSTALSATR--AGGKVCLVGMGH  288 (321)
Q Consensus       259 id~~g~~----------~---------------~~~~~~~~l~--~~G~~v~~g~~~  288 (321)
                      |++.|..          +               ..+.++..+.  ..|+++.+++..
T Consensus        79 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~  135 (264)
T 2dtx_A           79 VNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQ  135 (264)
T ss_dssp             EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGG
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCch
Confidence            9998831          1               1334445553  358999998643

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=96.74  E-value=0.0063  Score=52.03  Aligned_cols=101  Identities=15%  Similarity=0.197  Sum_probs=71.6

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCC--e--EEecCCCcccHHHHHHHHHH
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD--N--IVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~--~--vi~~~~~~~~~~~~~~~~~~  249 (321)
                      ++...++++.+||-+|+| .|..+..+++..+. .+++++.+++..+.+++....  .  ++..+-  .+.        .
T Consensus        48 ~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~--~~~--------~  115 (266)
T 3ujc_A           48 LSDIELNENSKVLDIGSG-LGGGCMYINEKYGA-HTHGIDICSNIVNMANERVSGNNKIIFEANDI--LTK--------E  115 (266)
T ss_dssp             TTTCCCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHTCCSCTTEEEEECCT--TTC--------C
T ss_pred             HHhcCCCCCCEEEEECCC-CCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhhcCCCeEEEECcc--ccC--------C
Confidence            355678899999999987 68888888887777 799999999999999876532  1  121111  110        0


Q ss_pred             HhCCCccEEEEcCCC--------HHHHHHHHHHcccCCEEEEEcC
Q 020768          250 AMGTGIDVSFDCAGF--------NKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       250 ~~~~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      .....+|+|+....-        ...+..+.+.|+++|++++...
T Consensus       116 ~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  160 (266)
T 3ujc_A          116 FPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDY  160 (266)
T ss_dssp             CCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             CCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence            113579999975321        2357888899999999998864

>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1

Probab=96.74  E-value=0.0057  Score=54.36  Aligned_cols=93  Identities=23%  Similarity=0.245  Sum_probs=65.1

Q ss_pred             CEEEEEcCChhHHHHHHHHHH--cCCCeEEEEeCChhH--HHHHHHcCCCeEEecCCCcccHHHHHHHHHH-HhCCCccE
Q 020768          183 TNVLIMGAGPIGLVTMLGARA--FGAPRIVIVDVDDYR--LSVAKELGADNIVKVSTNLQDIAEEVEKIQK-AMGTGIDV  257 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~--~g~~~vv~v~~~~~~--~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~-~~~~~~d~  257 (321)
                      -+|.|+|+|.+|...+..+..  -+.+.+.+++.++++  .++++++|.....      .+    ..++.+ ..+.++|+
T Consensus         5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~------~~----~e~ll~~~~~~~iDv   74 (312)
T 1nvm_B            5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY------AG----VEGLIKLPEFADIDF   74 (312)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES------SH----HHHHHHSGGGGGEEE
T ss_pred             CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCccc------CC----HHHHHhccCCCCCcE
Confidence            478999999999988888743  456556667777665  5677888875211      12    222221 11357999


Q ss_pred             EEEcCCCHHHHHHHHHHccc--CCEEEEEc
Q 020768          258 SFDCAGFNKTMSTALSATRA--GGKVCLVG  285 (321)
Q Consensus       258 vid~~g~~~~~~~~~~~l~~--~G~~v~~g  285 (321)
                      |+++++...+.+.+..+++.  |.++++..
T Consensus        75 V~~atp~~~h~~~a~~al~a~~Gk~Vi~ek  104 (312)
T 1nvm_B           75 VFDATSASAHVQNEALLRQAKPGIRLIDLT  104 (312)
T ss_dssp             EEECSCHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEECCChHHHHHHHHHHHHhCCCCEEEEcC
Confidence            99999987788888899988  88877743

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=96.73  E-value=0.012  Score=51.09  Aligned_cols=82  Identities=24%  Similarity=0.249  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHc---CCC-eEEecCCCcccHHHHHHHHHHHhCCCc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL---GAD-NIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~---g~~-~vi~~~~~~~~~~~~~~~~~~~~~~~~  255 (321)
                      .|+++||+|+ +++|...++.+...|+ .|++++++++..+.++++   +.. ..+..+-.+.+..+.+.+.... .+++
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~-~g~i  107 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGA-HVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAA-TRRV  107 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHH-HSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHh-cCCC
Confidence            4789999998 9999999999989999 677777665544444443   322 1222222222222222222121 2579


Q ss_pred             cEEEEcCCC
Q 020768          256 DVSFDCAGF  264 (321)
Q Consensus       256 d~vid~~g~  264 (321)
                      |++|++.|.
T Consensus       108 D~lv~nAg~  116 (273)
T 3uf0_A          108 DVLVNNAGI  116 (273)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEECCCC
Confidence            999999884

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=96.73  E-value=0.012  Score=50.38  Aligned_cols=82  Identities=26%  Similarity=0.255  Sum_probs=55.4

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCe-EEecCC-CcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .++++||+|+ +++|...++.+...|+ .|+.++++.++.+.+ ++++... .+..+- +..+..+.+.++.+. .+++|
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~id   85 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGA-KVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSK-FGKVD   85 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHH-HSCCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHh-cCCCC
Confidence            4689999998 9999999999999999 688888888776654 4565432 222221 222333344444333 34799


Q ss_pred             EEEEcCCC
Q 020768          257 VSFDCAGF  264 (321)
Q Consensus       257 ~vid~~g~  264 (321)
                      ++|.+.|.
T Consensus        86 ~li~~Ag~   93 (261)
T 3n74_A           86 ILVNNAGI   93 (261)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999874

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=96.73  E-value=0.0083  Score=50.25  Aligned_cols=106  Identities=19%  Similarity=0.243  Sum_probs=71.0

Q ss_pred             cCCCCCCEEEEEcCChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768          177 ANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      ....++++||-+|+| .|..++.+++..+ ...+++++.+++..+.+++    .|...-+.+..  .+..+.+.++.. .
T Consensus        65 ~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~--~d~~~~~~~~~~-~  140 (229)
T 2avd_A           65 ARLIQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRL--KPALETLDELLA-A  140 (229)
T ss_dssp             HHHTTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEE--SCHHHHHHHHHH-T
T ss_pred             HHhcCCCEEEEEcCC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEE--cCHHHHHHHHHh-c
Confidence            344678899999987 6888889998764 3489999999988877764    35422111111  233333333321 1


Q ss_pred             C--CCccEEEEcCCC---HHHHHHHHHHcccCCEEEEEcC
Q 020768          252 G--TGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       252 ~--~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      +  ..+|+|+-....   ...+..+.+.|+++|.++....
T Consensus       141 ~~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~  180 (229)
T 2avd_A          141 GEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLRV  180 (229)
T ss_dssp             TCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             CCCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEECC
Confidence            1  579998875443   2568899999999999998653

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=96.73  E-value=0.014  Score=50.20  Aligned_cols=82  Identities=29%  Similarity=0.351  Sum_probs=52.9

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHc----CCCe-EEecCC-CcccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL----GADN-IVKVST-NLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~----g~~~-vi~~~~-~~~~~~~~~~~~~~~~~  252 (321)
                      .++++||+|+ |++|...++.+...|+ .|++++++.++.+.+ +++    +... .+..+- +.++..+.+.++.+. .
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   83 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGA-HIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSS-F   83 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            4688999998 9999999999999999 688888887765433 222    4332 222221 222333333433332 2


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      +++|++|.+.|.
T Consensus        84 g~id~lv~~Ag~   95 (263)
T 3ai3_A           84 GGADILVNNAGT   95 (263)
T ss_dssp             SSCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999873

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.72  E-value=0.0066  Score=52.79  Aligned_cols=82  Identities=24%  Similarity=0.261  Sum_probs=52.4

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHc---CC---C-eEEecCC-CcccHHHHHHHHHHH
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GA---D-NIVKVST-NLQDIAEEVEKIQKA  250 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~---g~---~-~vi~~~~-~~~~~~~~~~~~~~~  250 (321)
                      .+.++||+|+ |++|...++.+...|+ .|++++++.++.+.+ +++   +.   . ..+..+- +..+..+.+.++.+.
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   83 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence            4678999998 9999999999989999 688888887765543 222   32   1 1222221 122333334443332


Q ss_pred             hCCCccEEEEcCCC
Q 020768          251 MGTGIDVSFDCAGF  264 (321)
Q Consensus       251 ~~~~~d~vid~~g~  264 (321)
                       .+++|++|++.|.
T Consensus        84 -~g~iD~lv~nAg~   96 (280)
T 1xkq_A           84 -FGKIDVLVNNAGA   96 (280)
T ss_dssp             -HSCCCEEEECCCC
T ss_pred             -cCCCCEEEECCCC
Confidence             2479999999873

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=96.72  E-value=0.023  Score=49.24  Aligned_cols=78  Identities=18%  Similarity=0.243  Sum_probs=51.8

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCe-EEecCCC-cccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADN-IVKVSTN-LQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .|+++||+|+ +++|...++.+...|+ .|++++++.++.+.+ ++++... .+..+-. ..+..+.+.++ + ..+++|
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~-~-~~~~id  105 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGL-GVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAA-N-QLGRLR  105 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHH-T-TSSEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHH-H-HhCCCC
Confidence            4788999998 9999999999989999 688888888776654 4565432 2222222 22233333333 2 235789


Q ss_pred             EEEEc
Q 020768          257 VSFDC  261 (321)
Q Consensus       257 ~vid~  261 (321)
                      ++|.+
T Consensus       106 ~lv~~  110 (281)
T 3ppi_A          106 YAVVA  110 (281)
T ss_dssp             EEEEC
T ss_pred             eEEEc
Confidence            99988

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=96.72  E-value=0.015  Score=49.15  Aligned_cols=79  Identities=28%  Similarity=0.256  Sum_probs=52.7

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      +++++||+|+ |++|...++.+...|+ .|++++++.++.+.+ +++....++..+-.  +. +.+.++.+ ..+++|++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~--~~-~~~~~~~~-~~~~id~v   80 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDLG--DW-EATERALG-SVGPVDLL   80 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTT--CH-HHHHHHHT-TCCCCCEE
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCCCEEEEeCC--CH-HHHHHHHH-HcCCCCEE
Confidence            4789999998 9999999999999999 688888887776544 34432233332222  22 23333332 23469999


Q ss_pred             EEcCCC
Q 020768          259 FDCAGF  264 (321)
Q Consensus       259 id~~g~  264 (321)
                      |++.|.
T Consensus        81 i~~Ag~   86 (244)
T 3d3w_A           81 VNNAAV   86 (244)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999883

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=96.72  E-value=0.024  Score=48.48  Aligned_cols=107  Identities=19%  Similarity=0.137  Sum_probs=64.7

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHH-HcCCCe-EEecCC-CcccHHHHHHHHHHHhCCCcc
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAK-ELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~-~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      |+++||+|+ +++|...++.+...|. ..|+.+++++++.+.+. +++... .+..+- +..+..+.+.++.+. .+++|
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~id   80 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKG-HGKID   80 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHH-HSCCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHh-cCCcc
Confidence            578999998 9999988877666642 26777888887766543 454322 222221 222333344444333 35799


Q ss_pred             EEEEcCCCH-----------H---------------HHHHHHHHc-ccCCEEEEEcCCCC
Q 020768          257 VSFDCAGFN-----------K---------------TMSTALSAT-RAGGKVCLVGMGHL  289 (321)
Q Consensus       257 ~vid~~g~~-----------~---------------~~~~~~~~l-~~~G~~v~~g~~~~  289 (321)
                      +++++.|..           +               ..+.++..+ +.+|+++.+++...
T Consensus        81 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~  140 (254)
T 3kzv_A           81 SLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDAC  140 (254)
T ss_dssp             EEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCC
T ss_pred             EEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchh
Confidence            999998851           0               123333433 34699999986544

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=96.72  E-value=0.0091  Score=51.20  Aligned_cols=82  Identities=17%  Similarity=0.170  Sum_probs=53.4

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCe-EEecCCC-cccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~  253 (321)
                      .|+++||+|+ +++|...++.+...|+ .|++++++.++.+.+    ++.+... .+..+-. ..+..+.+.++.+. .+
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g   88 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQ-FG   88 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence            4789999998 9999999998888999 688888887765543    2334332 2222222 22333334444332 35


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|++.|.
T Consensus        89 ~id~lv~nAg~   99 (256)
T 3gaf_A           89 KITVLVNNAGG   99 (256)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999884

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=96.72  E-value=0.011  Score=50.82  Aligned_cols=82  Identities=22%  Similarity=0.240  Sum_probs=53.1

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCC-eEEecCC-CcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .+.++||+|+ |++|...++.+...|+ .|++++++.++.+.+ +++... ..+..+- +..+..+.+.++.+. .+++|
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~g~iD   83 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTA-FGGLH   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHH-HSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHH-cCCCC
Confidence            4688999998 9999999998888999 688888887766543 344321 1222221 222333334443332 24799


Q ss_pred             EEEEcCCC
Q 020768          257 VSFDCAGF  264 (321)
Q Consensus       257 ~vid~~g~  264 (321)
                      ++|++.|.
T Consensus        84 ~lv~~Ag~   91 (260)
T 1nff_A           84 VLVNNAGI   91 (260)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999883

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=96.71  E-value=0.0073  Score=53.09  Aligned_cols=82  Identities=26%  Similarity=0.310  Sum_probs=53.0

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHc---CCCeE--EecCCC-cccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GADNI--VKVSTN-LQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~---g~~~v--i~~~~~-~~~~~~~~~~~~~~~~  252 (321)
                      .++++||+|+ |++|...++.+...|+ .|++++++.++.+.+ +++   +...+  +..+-. ..+..+.+.++.+. .
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~  117 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDA-F  117 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHH-c
Confidence            5789999998 9999999999999999 688888887665433 333   21122  222222 22333334444332 3


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      +++|++|++.|.
T Consensus       118 g~iD~lvnnAg~  129 (293)
T 3rih_A          118 GALDVVCANAGI  129 (293)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            579999999884

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=96.71  E-value=0.029  Score=48.50  Aligned_cols=107  Identities=20%  Similarity=0.200  Sum_probs=65.3

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhH--------HH---HHHHcCCCe-EEecCC-CcccHHHHHHH
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYR--------LS---VAKELGADN-IVKVST-NLQDIAEEVEK  246 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~--------~~---~~~~~g~~~-vi~~~~-~~~~~~~~~~~  246 (321)
                      .|+++||+|+ +++|...++.+...|+ +|+.++++.++        .+   .++..+... .+..+- +..+..+.+.+
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   83 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAA   83 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH
Confidence            4789999998 9999999999889999 67777777542        11   223334322 222221 22233333444


Q ss_pred             HHHHhCCCccEEEEcCCCH----------H---------------HHHHHHHHcc--cCCEEEEEcCCCC
Q 020768          247 IQKAMGTGIDVSFDCAGFN----------K---------------TMSTALSATR--AGGKVCLVGMGHL  289 (321)
Q Consensus       247 ~~~~~~~~~d~vid~~g~~----------~---------------~~~~~~~~l~--~~G~~v~~g~~~~  289 (321)
                      +.+. .+++|++|++.|..          +               ..+.++..+.  .+|+++.+++...
T Consensus        84 ~~~~-~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~  152 (274)
T 3e03_A           84 TVDT-FGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPS  152 (274)
T ss_dssp             HHHH-HSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCC
T ss_pred             HHHH-cCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHh
Confidence            4332 35799999999842          1               2334445453  4589999986544

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=96.71  E-value=0.013  Score=50.96  Aligned_cols=81  Identities=19%  Similarity=0.225  Sum_probs=52.0

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCC-CeEE--ecCC-CcccHHHHHHHHHHHhCCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGA-DNIV--KVST-NLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~-~~vi--~~~~-~~~~~~~~~~~~~~~~~~~  254 (321)
                      .++++||+|+ |++|...++.+...|+ .|++++++.++.+.+ +++.. ..+.  ..+- +.++..+.+.++.+. .++
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g~  105 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGA-RVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGEL-SAR  105 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHH-CSC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHh-cCC
Confidence            4689999998 9999999999999998 688888887765533 33321 0221  1111 122233333333332 457


Q ss_pred             ccEEEEcCC
Q 020768          255 IDVSFDCAG  263 (321)
Q Consensus       255 ~d~vid~~g  263 (321)
                      +|++|++.|
T Consensus       106 iD~lvnnAg  114 (276)
T 2b4q_A          106 LDILVNNAG  114 (276)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999988

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=96.70  E-value=0.0092  Score=51.88  Aligned_cols=82  Identities=27%  Similarity=0.350  Sum_probs=53.0

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCC--eE--EecCC-CcccHHHHHHHHHHH
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGAD--NI--VKVST-NLQDIAEEVEKIQKA  250 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~--~v--i~~~~-~~~~~~~~~~~~~~~  250 (321)
                      .++++||+|+ +++|...++.+...|+ .|++++++.++.+.+    ++.+..  .+  +..+- +..+..+.+.++.+.
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW   88 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            4789999998 9999999999889999 688888887765433    223321  22  21121 222333334444332


Q ss_pred             hCCCccEEEEcCCC
Q 020768          251 MGTGIDVSFDCAGF  264 (321)
Q Consensus       251 ~~~~~d~vid~~g~  264 (321)
                       .+++|++|.+.|.
T Consensus        89 -~g~id~lv~nAg~  101 (281)
T 3svt_A           89 -HGRLHGVVHCAGG  101 (281)
T ss_dssp             -HSCCCEEEECCCC
T ss_pred             -cCCCCEEEECCCc
Confidence             3579999999985

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=96.70  E-value=0.013  Score=50.95  Aligned_cols=85  Identities=18%  Similarity=0.178  Sum_probs=52.4

Q ss_pred             CCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HH---cCCCe-EEecCC-CcccHHHHHHHHHHH
Q 020768          178 NIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGADN-IVKVST-NLQDIAEEVEKIQKA  250 (321)
Q Consensus       178 ~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~---~g~~~-vi~~~~-~~~~~~~~~~~~~~~  250 (321)
                      .+..++++||+|+ +++|...+..+...|+ .|++++++.++.+.+ ++   .+... .+..+- +.++..+.+.++.+.
T Consensus        20 ~m~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   98 (279)
T 3sju_A           20 HMSRPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVER   98 (279)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3456789999998 9999999998888999 688888887765543 22   34332 222221 222333334444332


Q ss_pred             hCCCccEEEEcCCC
Q 020768          251 MGTGIDVSFDCAGF  264 (321)
Q Consensus       251 ~~~~~d~vid~~g~  264 (321)
                       .+++|++|++.|.
T Consensus        99 -~g~id~lv~nAg~  111 (279)
T 3sju_A           99 -FGPIGILVNSAGR  111 (279)
T ss_dssp             -HCSCCEEEECCCC
T ss_pred             -cCCCcEEEECCCC
Confidence             3579999999884

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=96.70  E-value=0.0032  Score=52.92  Aligned_cols=99  Identities=18%  Similarity=0.202  Sum_probs=68.3

Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcCC------CeEEEEeCChhHHHHHHHc----C-----CCeEEecCCCcccHHH
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFGA------PRIVIVDVDDYRLSVAKEL----G-----ADNIVKVSTNLQDIAE  242 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~------~~vv~v~~~~~~~~~~~~~----g-----~~~vi~~~~~~~~~~~  242 (321)
                      .++++++||-+|+|. |..+..+++..+.      ..+++++.+++..+.+++.    +     ...+.....   +..+
T Consensus        81 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~---d~~~  156 (227)
T 1r18_A           81 HLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEG---DGRK  156 (227)
T ss_dssp             TCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEES---CGGG
T ss_pred             hCCCCCEEEEECCCc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEEC---Cccc
Confidence            578999999999976 8888888887663      3799999999887776642    1     112211111   1111


Q ss_pred             HHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEc
Q 020768          243 EVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       243 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      .   +  .....+|+|+....-......+.+.|+++|++++.-
T Consensus       157 ~---~--~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~~  194 (227)
T 1r18_A          157 G---Y--PPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVPV  194 (227)
T ss_dssp             C---C--GGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             C---C--CcCCCccEEEECCchHHHHHHHHHHhcCCCEEEEEE
Confidence            0   1  012569999987776666788999999999988754

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=96.70  E-value=0.027  Score=50.20  Aligned_cols=81  Identities=19%  Similarity=0.096  Sum_probs=52.6

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEe-CChhHHHHHH-----HcCCCe-EE--ecCCCcc------------
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVD-VDDYRLSVAK-----ELGADN-IV--KVSTNLQ------------  238 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~-~~~~~~~~~~-----~~g~~~-vi--~~~~~~~------------  238 (321)
                      .+.++||+|+ +++|...++.+...|+ .|++++ ++.++.+.+.     +.+... .+  |+.+ ..            
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~-~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~  122 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN-VATAPVSGADGSAP  122 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSS-SCBCC-------CC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCC-chhccccccccccc
Confidence            4688999998 9999999999999999 677777 7776654332     234322 22  2222 22            


Q ss_pred             -----cHHHHHHHHHHHhCCCccEEEEcCCC
Q 020768          239 -----DIAEEVEKIQKAMGTGIDVSFDCAGF  264 (321)
Q Consensus       239 -----~~~~~~~~~~~~~~~~~d~vid~~g~  264 (321)
                           +..+.+.++.+. .+++|++|++.|.
T Consensus       123 ~~~~~~v~~~~~~~~~~-~g~iD~lVnnAG~  152 (328)
T 2qhx_A          123 VTLFTRCAELVAACYTH-WGRCDVLVNNASS  152 (328)
T ss_dssp             BCHHHHHHHHHHHHHHH-HSCCCEEEECCCC
T ss_pred             cccHHHHHHHHHHHHHh-cCCCCEEEECCCC
Confidence                 344444444332 3579999999874

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.70  E-value=0.0048  Score=52.25  Aligned_cols=82  Identities=18%  Similarity=0.273  Sum_probs=53.5

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcC--CCeEEEEeCChhHHHHHHHc-CCC-eEEecCCC-cccHHHHHHHHHHHhC-CC
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFG--APRIVIVDVDDYRLSVAKEL-GAD-NIVKVSTN-LQDIAEEVEKIQKAMG-TG  254 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g--~~~vv~v~~~~~~~~~~~~~-g~~-~vi~~~~~-~~~~~~~~~~~~~~~~-~~  254 (321)
                      +.++||+|+ |++|...++.+...|  . .|++++++.++.+.++++ +.. ..+..+-. .....+.+.++.+..+ .+
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~   81 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIR-HIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCC-EEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCc-EEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            578999998 999999999888889  7 788888888777666655 222 12222222 2233333343333222 27


Q ss_pred             ccEEEEcCCC
Q 020768          255 IDVSFDCAGF  264 (321)
Q Consensus       255 ~d~vid~~g~  264 (321)
                      +|++|.+.|.
T Consensus        82 id~li~~Ag~   91 (250)
T 1yo6_A           82 LSLLINNAGV   91 (250)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCcc
Confidence            9999999874

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=96.70  E-value=0.017  Score=49.27  Aligned_cols=82  Identities=21%  Similarity=0.208  Sum_probs=52.8

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCCh-hHHH-HHHHcCCCe-EEecCCC-cccHHHHHHHHHHHhCCCc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD-YRLS-VAKELGADN-IVKVSTN-LQDIAEEVEKIQKAMGTGI  255 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~-~~~~-~~~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~~~  255 (321)
                      .++++||+|+ |++|...+..+...|+ .|+++++++ ++.+ .+++.+... .+..+-. .++..+.+.++.+. .+++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~i   83 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVIST-FGRC   83 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-HSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH-cCCC
Confidence            4688999998 9999999999999999 677777776 5544 345555432 2222211 22333333333322 2579


Q ss_pred             cEEEEcCCC
Q 020768          256 DVSFDCAGF  264 (321)
Q Consensus       256 d~vid~~g~  264 (321)
                      |++|++.|.
T Consensus        84 d~lv~nAg~   92 (249)
T 2ew8_A           84 DILVNNAGI   92 (249)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=96.69  E-value=0.015  Score=50.06  Aligned_cols=105  Identities=20%  Similarity=0.256  Sum_probs=63.3

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeC-ChhHHHH----HHHcCCCe-EEecCCC-cccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV-DDYRLSV----AKELGADN-IVKVSTN-LQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~-~~~~~~~----~~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~  252 (321)
                      .+.++||+|+ |++|...+..+...|+ .|+++++ +.++.+.    +++.+... .+..+-. ..+..+.+.++.+. .
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   97 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH-F   97 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH-c
Confidence            4678999998 9999999999888998 5777766 6555432    22335432 2222211 22333333333322 2


Q ss_pred             CCccEEEEcCCCH----------H---------------HHHHHHHHcccCCEEEEEcCC
Q 020768          253 TGIDVSFDCAGFN----------K---------------TMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       253 ~~~d~vid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      +++|++|.+.|..          +               ..+.++..++.+|+++.+++.
T Consensus        98 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~  157 (274)
T 1ja9_A           98 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSI  157 (274)
T ss_dssp             SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred             CCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcCh
Confidence            4799999988731          1               122334445556899999854

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=96.69  E-value=0.01  Score=51.63  Aligned_cols=82  Identities=27%  Similarity=0.270  Sum_probs=55.3

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCeE-EecCC-CcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNI-VKVST-NLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~v-i~~~~-~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .|+++||+|+ +++|...+..+...|+ +|++++++.++.+.+ ++++.... +..+- +..+..+.+.++.+. .+++|
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~iD   81 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGA-RVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAA-FGKID   81 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHH-HSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHh-cCCCC
Confidence            4789999998 9999999999999999 688888888776654 34554322 22221 222333344444333 35799


Q ss_pred             EEEEcCCC
Q 020768          257 VSFDCAGF  264 (321)
Q Consensus       257 ~vid~~g~  264 (321)
                      ++|++.|.
T Consensus        82 ~lvnnAg~   89 (281)
T 3zv4_A           82 TLIPNAGI   89 (281)
T ss_dssp             EEECCCCC
T ss_pred             EEEECCCc
Confidence            99999884

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=96.69  E-value=0.019  Score=49.59  Aligned_cols=82  Identities=26%  Similarity=0.335  Sum_probs=53.1

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCe-EEecCCC-cccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~  253 (321)
                      .+.++||+|+ |++|...+..+...|+ .|++++++.++.+.+    ++.+... .+..+-. ..+..+.+.++.+. .+
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~g  107 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE-IG  107 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-TC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHH-CC
Confidence            4689999998 9999999999999998 688888887665433    2234332 2222222 22333333433332 35


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|.++|.
T Consensus       108 ~iD~li~~Ag~  118 (272)
T 1yb1_A          108 DVSILVNNAGV  118 (272)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCcEEEECCCc
Confidence            79999999874

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=96.69  E-value=0.033  Score=49.39  Aligned_cols=82  Identities=22%  Similarity=0.244  Sum_probs=51.1

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCC------------hhHHH----HHHHcCCCeE-EecCC-CcccHH
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD------------DYRLS----VAKELGADNI-VKVST-NLQDIA  241 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~------------~~~~~----~~~~~g~~~v-i~~~~-~~~~~~  241 (321)
                      .|+++||+|+ +++|...++.+...|+ .|++++.+            .++.+    .+++.+.... +..+- +..+..
T Consensus        45 ~gk~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~  123 (317)
T 3oec_A           45 QGKVAFITGAARGQGRTHAVRLAQDGA-DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ  123 (317)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-eEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            5789999998 9999999999999999 57777654            33332    2234454322 22221 222333


Q ss_pred             HHHHHHHHHhCCCccEEEEcCCC
Q 020768          242 EEVEKIQKAMGTGIDVSFDCAGF  264 (321)
Q Consensus       242 ~~~~~~~~~~~~~~d~vid~~g~  264 (321)
                      +.+.++.+. .+++|++|++.|.
T Consensus       124 ~~~~~~~~~-~g~iD~lVnnAg~  145 (317)
T 3oec_A          124 AVVDEALAE-FGHIDILVSNVGI  145 (317)
T ss_dssp             HHHHHHHHH-HSCCCEEEECCCC
T ss_pred             HHHHHHHHH-cCCCCEEEECCCC
Confidence            344444332 3579999999884

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=96.67  E-value=0.017  Score=49.32  Aligned_cols=78  Identities=22%  Similarity=0.297  Sum_probs=49.8

Q ss_pred             CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCe-EEecCCCcccHHHHHHHHHHH---hCCCcc
Q 020768          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADN-IVKVSTNLQDIAEEVEKIQKA---MGTGID  256 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~-vi~~~~~~~~~~~~~~~~~~~---~~~~~d  256 (321)
                      +++||+|+ |++|...++.+...|+ .|++++++.++.+.+ ++++... .+..+-.  +. +.+.++.+.   ..+++|
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~--~~-~~v~~~~~~~~~~~g~iD   76 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVR--NR-AAIEEMLASLPAEWCNID   76 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTT--CH-HHHHHHHHTSCTTTCCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCC--CH-HHHHHHHHHHHHhCCCCC
Confidence            36889998 9999999999989998 688888887776544 4454322 2222211  21 223333221   134799


Q ss_pred             EEEEcCCC
Q 020768          257 VSFDCAGF  264 (321)
Q Consensus       257 ~vid~~g~  264 (321)
                      ++|++.|.
T Consensus        77 ~lvnnAg~   84 (248)
T 3asu_A           77 ILVNNAGL   84 (248)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999873

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=96.67  E-value=0.044  Score=41.65  Aligned_cols=94  Identities=18%  Similarity=0.179  Sum_probs=59.3

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH-cCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      +.+|+|+|+|.+|...++.+...|. .|++++.++++.+.+++ ++... +.-+.  .+. +.+.+   ..-.++|+||.
T Consensus         4 ~m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~-~~~d~--~~~-~~l~~---~~~~~~d~vi~   75 (140)
T 1lss_A            4 GMYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDALV-INGDC--TKI-KTLED---AGIEDADMYIA   75 (140)
T ss_dssp             -CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSEE-EESCT--TSH-HHHHH---TTTTTCSEEEE
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHhcCcEE-EEcCC--CCH-HHHHH---cCcccCCEEEE
Confidence            3579999999999999999988898 68888998888776653 56532 22111  111 12221   12356899999


Q ss_pred             cCCCHHHHH---HHHHHcccCCEEEEE
Q 020768          261 CAGFNKTMS---TALSATRAGGKVCLV  284 (321)
Q Consensus       261 ~~g~~~~~~---~~~~~l~~~G~~v~~  284 (321)
                      +++.+..-.   ...+.+.++ +++..
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~-~ii~~  101 (140)
T 1lss_A           76 VTGKEEVNLMSSLLAKSYGIN-KTIAR  101 (140)
T ss_dssp             CCSCHHHHHHHHHHHHHTTCC-CEEEE
T ss_pred             eeCCchHHHHHHHHHHHcCCC-EEEEE
Confidence            999864322   233444443 55543

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=96.66  E-value=0.0033  Score=51.39  Aligned_cols=105  Identities=18%  Similarity=0.228  Sum_probs=70.2

Q ss_pred             HHcCCCCCCEEEEEcCChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHHHH----cCC-CeEEecCCCcccHHHHHHHHH
Q 020768          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKE----LGA-DNIVKVSTNLQDIAEEVEKIQ  248 (321)
Q Consensus       175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~~~----~g~-~~vi~~~~~~~~~~~~~~~~~  248 (321)
                      ....++++++||-+|+|. |..+..+++..+ ...+++++.+++..+.+++    .|. ..+.....+..++.       
T Consensus        16 ~~~~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-------   87 (197)
T 3eey_A           16 IKMFVKEGDTVVDATCGN-GNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMD-------   87 (197)
T ss_dssp             HHHHCCTTCEEEESCCTT-SHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGG-------
T ss_pred             HHhcCCCCCEEEEcCCCC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHh-------
Confidence            344678899999999866 788888888864 2379999999988877754    343 22221212211111       


Q ss_pred             HHhCCCccEEEEcCCC---------------HHHHHHHHHHcccCCEEEEEcCC
Q 020768          249 KAMGTGIDVSFDCAGF---------------NKTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       249 ~~~~~~~d~vid~~g~---------------~~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      ......+|+|+...+-               ...+..+.+.|+++|++++....
T Consensus        88 ~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~  141 (197)
T 3eey_A           88 KYIDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY  141 (197)
T ss_dssp             GTCCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred             hhccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence            1124579999966532               25788999999999999987644

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=96.66  E-value=0.016  Score=50.71  Aligned_cols=83  Identities=22%  Similarity=0.275  Sum_probs=50.6

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCC--CeEEEEeCChhHHHHHH-Hc-----CCCe-EEecCC-CcccHHHHHHHHHH
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGA--PRIVIVDVDDYRLSVAK-EL-----GADN-IVKVST-NLQDIAEEVEKIQK  249 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~--~~vv~v~~~~~~~~~~~-~~-----g~~~-vi~~~~-~~~~~~~~~~~~~~  249 (321)
                      .|+++||+|+ +++|...+..+...|+  ..|+.++++.++.+.+. ++     +... .+..+- +.++..+.+.++.+
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  111 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ  111 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            3689999998 9999988877766665  26888888877765443 22     3221 222221 22333333333322


Q ss_pred             HhCCCccEEEEcCCC
Q 020768          250 AMGTGIDVSFDCAGF  264 (321)
Q Consensus       250 ~~~~~~d~vid~~g~  264 (321)
                      . .+++|++|++.|.
T Consensus       112 ~-~g~iD~lVnnAG~  125 (287)
T 3rku_A          112 E-FKDIDILVNNAGK  125 (287)
T ss_dssp             G-GCSCCEEEECCCC
T ss_pred             h-cCCCCEEEECCCc
Confidence            1 3479999999883

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.66  E-value=0.0097  Score=52.71  Aligned_cols=88  Identities=19%  Similarity=0.185  Sum_probs=65.7

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      .|.+|.|+|.|.+|...++.++.+|+ .|++.+++.++ +.+.++|+...        ++.+.+        ...|+|+.
T Consensus       141 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~~--------~l~ell--------~~aDvV~l  202 (307)
T 1wwk_A          141 EGKTIGIIGFGRIGYQVAKIANALGM-NILLYDPYPNE-ERAKEVNGKFV--------DLETLL--------KESDVVTI  202 (307)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHTTCEEC--------CHHHHH--------HHCSEEEE
T ss_pred             CCceEEEEccCHHHHHHHHHHHHCCC-EEEEECCCCCh-hhHhhcCcccc--------CHHHHH--------hhCCEEEE
Confidence            46789999999999999999999999 68889888776 56677776321        222222        13799999


Q ss_pred             cCCCHH----HH-HHHHHHcccCCEEEEEcC
Q 020768          261 CAGFNK----TM-STALSATRAGGKVCLVGM  286 (321)
Q Consensus       261 ~~g~~~----~~-~~~~~~l~~~G~~v~~g~  286 (321)
                      ++....    .+ ...+..+++++.++.++.
T Consensus       203 ~~p~~~~t~~li~~~~l~~mk~ga~lin~ar  233 (307)
T 1wwk_A          203 HVPLVESTYHLINEERLKLMKKTAILINTSR  233 (307)
T ss_dssp             CCCCSTTTTTCBCHHHHHHSCTTCEEEECSC
T ss_pred             ecCCChHHhhhcCHHHHhcCCCCeEEEECCC
Confidence            887532    12 356788999999999985

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=96.65  E-value=0.021  Score=48.22  Aligned_cols=82  Identities=21%  Similarity=0.272  Sum_probs=48.8

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEE-eCChhHHHH----HHHcCCCe-EEecCCC-cccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIV-DVDDYRLSV----AKELGADN-IVKVSTN-LQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v-~~~~~~~~~----~~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~  252 (321)
                      .+.++||+|+ |++|...++.+...|+ .|+++ .+++++.+.    +++.+... .+..+-. ..+..+.+.++.+. .
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~-~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   81 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGA-NIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDA-F   81 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHH-H
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHh-c
Confidence            4678999998 9999999999999998 57666 555444332    22334332 2222211 22333333333332 2


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      +++|++|.+.|.
T Consensus        82 ~~~d~vi~~Ag~   93 (247)
T 2hq1_A           82 GRIDILVNNAGI   93 (247)
T ss_dssp             SCCCEEEECC--
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=96.65  E-value=0.01  Score=55.65  Aligned_cols=92  Identities=22%  Similarity=0.263  Sum_probs=70.1

Q ss_pred             CCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       179 ~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      .-.|.+|.|+|.|.+|..+++.++.+|+ +|++.+.+..+...+.+.|+. +.       +    +.++    -...|+|
T Consensus       254 ~l~GktVgIIG~G~IG~~vA~~l~~~G~-~Viv~d~~~~~~~~a~~~g~~-~~-------~----l~el----l~~aDiV  316 (479)
T 1v8b_A          254 LISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGFN-VV-------T----LDEI----VDKGDFF  316 (479)
T ss_dssp             CCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTCE-EC-------C----HHHH----TTTCSEE
T ss_pred             ccCCCEEEEEeeCHHHHHHHHHHHhCcC-EEEEEeCChhhHHHHHHcCCE-ec-------C----HHHH----HhcCCEE
Confidence            4578999999999999999999999999 799999988776455556652 11       1    2222    2468999


Q ss_pred             EEcCCCHHHH-HHHHHHcccCCEEEEEcCC
Q 020768          259 FDCAGFNKTM-STALSATRAGGKVCLVGMG  287 (321)
Q Consensus       259 id~~g~~~~~-~~~~~~l~~~G~~v~~g~~  287 (321)
                      +.+.++...+ ...++.++++..++.+|..
T Consensus       317 i~~~~t~~lI~~~~l~~MK~gailiNvgrg  346 (479)
T 1v8b_A          317 ITCTGNVDVIKLEHLLKMKNNAVVGNIGHF  346 (479)
T ss_dssp             EECCSSSSSBCHHHHTTCCTTCEEEECSST
T ss_pred             EECCChhhhcCHHHHhhcCCCcEEEEeCCC
Confidence            9998765544 3677889999999999843

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=96.65  E-value=0.023  Score=48.23  Aligned_cols=82  Identities=17%  Similarity=0.270  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeC-ChhHHHH----HHHcCCCeE-EecCC-CcccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV-DDYRLSV----AKELGADNI-VKVST-NLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~-~~~~~~~----~~~~g~~~v-i~~~~-~~~~~~~~~~~~~~~~~  252 (321)
                      .++++||+|+ |++|...++.+...|+ .|+++++ +.++.+.    +++.+.... +..+- +.++..+.+.++.+. .
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~   80 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGY-NVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQ-F   80 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-c
Confidence            4678999998 9999999999999999 4655544 4444332    233444322 22221 222333334444332 3


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      +++|+++.+.|.
T Consensus        81 g~id~lv~nAg~   92 (246)
T 3osu_A           81 GSLDVLVNNAGI   92 (246)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            579999999884

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=96.65  E-value=0.0038  Score=52.67  Aligned_cols=105  Identities=14%  Similarity=0.154  Sum_probs=70.2

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCC--CeEEecCCCcccHHHHHHHHHHHh
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA--DNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~--~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      ++...++++++||-+|+|. |..+..+++..|...|++++.+++..+.+++.-.  ..+.....+..+....   + . .
T Consensus        67 l~~~~~~~~~~VLDlGcG~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~---~-~-~  140 (230)
T 1fbn_A           67 LKVMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEY---A-N-I  140 (230)
T ss_dssp             CCCCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGG---T-T-T
T ss_pred             ccccCCCCCCEEEEEcccC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccc---c-c-c
Confidence            3445678899999999976 8888899998875589999999988877765321  2222111111111000   0 0 1


Q ss_pred             CCCccEEEEcCCCH---H-HHHHHHHHcccCCEEEEE
Q 020768          252 GTGIDVSFDCAGFN---K-TMSTALSATRAGGKVCLV  284 (321)
Q Consensus       252 ~~~~d~vid~~g~~---~-~~~~~~~~l~~~G~~v~~  284 (321)
                      ...+|+|+.....+   . .+..+.+.|+++|++++.
T Consensus       141 ~~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~  177 (230)
T 1fbn_A          141 VEKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             SCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CccEEEEEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence            24689999766554   3 478888999999999886

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=96.64  E-value=0.017  Score=50.05  Aligned_cols=82  Identities=24%  Similarity=0.419  Sum_probs=53.6

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCeE-EecCC-CcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNI-VKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~v-i~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      .|+++||+|+ +++|...++.+...|+ .|++++++.++.+.+    ++.+.... +..+- +..+..+.+.++.+. .+
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g  102 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQ-GI  102 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHH-TC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-CC
Confidence            4789999998 9999999999999999 688888887765433    23343322 11111 122333334444332 45


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|++.|.
T Consensus       103 ~iD~lv~nAg~  113 (271)
T 4ibo_A          103 DVDILVNNAGI  113 (271)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999884

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=96.63  E-value=0.015  Score=49.15  Aligned_cols=81  Identities=19%  Similarity=0.227  Sum_probs=49.7

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEE-EeCChhHHHHH----HHcCCCe-EEecCC-CcccHHHHHHHHHHHhCC
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVI-VDVDDYRLSVA----KELGADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~-v~~~~~~~~~~----~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      |+++||+|+ |++|...++.+...|+ .|++ ..++.++.+.+    ++.+... .+..+- +..+..+.+.++.+. .+
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g   78 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDA-WG   78 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHH-SS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHH-cC
Confidence            468999998 9999999999999999 5666 56776654432    2234321 122221 122333333433332 45


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|.+.|.
T Consensus        79 ~id~li~~Ag~   89 (244)
T 1edo_A           79 TIDVVVNNAGI   89 (244)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=96.62  E-value=0.0097  Score=51.74  Aligned_cols=99  Identities=15%  Similarity=0.159  Sum_probs=69.6

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHc----CCC-eEEecCCCcccHHHHHHHHH
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL----GAD-NIVKVSTNLQDIAEEVEKIQ  248 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~----g~~-~vi~~~~~~~~~~~~~~~~~  248 (321)
                      ++...++++.+||-+|+|. |..+..+++..|. .+++++.+++..+.+++.    |.. .+.....   ++.    ++ 
T Consensus        57 ~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~---d~~----~~-  126 (287)
T 1kpg_A           57 LGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLA---GWE----QF-  126 (287)
T ss_dssp             HTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEES---CGG----GC-
T ss_pred             HHHcCCCCcCEEEEECCcc-cHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEEC---Chh----hC-
Confidence            3456788999999999865 7788888877788 899999999888877653    322 2211111   111    11 


Q ss_pred             HHhCCCccEEEEc-----CC--C-HHHHHHHHHHcccCCEEEEEc
Q 020768          249 KAMGTGIDVSFDC-----AG--F-NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       249 ~~~~~~~d~vid~-----~g--~-~~~~~~~~~~l~~~G~~v~~g  285 (321)
                         ...+|+|+..     .+  . ...+..+.+.|+++|++++..
T Consensus       127 ---~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  168 (287)
T 1kpg_A          127 ---DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHT  168 (287)
T ss_dssp             ---CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             ---CCCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEE
Confidence               2569999975     22  1 356888999999999998865

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=96.61  E-value=0.022  Score=51.66  Aligned_cols=94  Identities=18%  Similarity=0.210  Sum_probs=64.7

Q ss_pred             CEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcC
Q 020768          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  262 (321)
                      -+|+|+|+|.+|..+++.+.. .. .|.+++.+.++.+.+++......+|.  .  + .+.+.++.    .+.|+||+|+
T Consensus        17 mkilvlGaG~vG~~~~~~L~~-~~-~v~~~~~~~~~~~~~~~~~~~~~~d~--~--d-~~~l~~~~----~~~DvVi~~~   85 (365)
T 3abi_A           17 MKVLILGAGNIGRAIAWDLKD-EF-DVYIGDVNNENLEKVKEFATPLKVDA--S--N-FDKLVEVM----KEFELVIGAL   85 (365)
T ss_dssp             CEEEEECCSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHTTTSEEEECCT--T--C-HHHHHHHH----TTCSEEEECC
T ss_pred             cEEEEECCCHHHHHHHHHHhc-CC-CeEEEEcCHHHHHHHhccCCcEEEec--C--C-HHHHHHHH----hCCCEEEEec
Confidence            379999999999998887754 34 57788899888887766432222222  1  2 22343332    4689999999


Q ss_pred             CCHHHHHHHHHHcccCCEEEEEcCC
Q 020768          263 GFNKTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       263 g~~~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      +.......+-.++..+-.++.+...
T Consensus        86 p~~~~~~v~~~~~~~g~~yvD~s~~  110 (365)
T 3abi_A           86 PGFLGFKSIKAAIKSKVDMVDVSFM  110 (365)
T ss_dssp             CGGGHHHHHHHHHHHTCEEEECCCC
T ss_pred             CCcccchHHHHHHhcCcceEeeecc
Confidence            9765666666777888888887643

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=96.61  E-value=0.0048  Score=52.37  Aligned_cols=106  Identities=14%  Similarity=0.127  Sum_probs=69.7

Q ss_pred             HHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHHHcCC--CeEEecCCCcccHHHHHHHHHH
Q 020768          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKELGA--DNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       173 ~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~~~g~--~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      +++...++||++||=+|+|. |..+..+|+..|. .+|++++.+++..+.+++.-.  ..+.....+..+...    . .
T Consensus        69 gl~~l~ikpG~~VldlG~G~-G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~----~-~  142 (233)
T 4df3_A           69 GLIELPVKEGDRILYLGIAS-GTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEK----Y-R  142 (233)
T ss_dssp             TCSCCCCCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGG----G-T
T ss_pred             chhhcCCCCCCEEEEecCcC-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccc----c-c
Confidence            34667899999999999865 7888888888764 379999999998887765321  222222111111110    0 0


Q ss_pred             HhCCCccEEEEcCCCH----HHHHHHHHHcccCCEEEEE
Q 020768          250 AMGTGIDVSFDCAGFN----KTMSTALSATRAGGKVCLV  284 (321)
Q Consensus       250 ~~~~~~d~vid~~g~~----~~~~~~~~~l~~~G~~v~~  284 (321)
                      .....+|+|+....-+    ..+..+.+.|+++|++++.
T Consensus       143 ~~~~~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~  181 (233)
T 4df3_A          143 HLVEGVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMA  181 (233)
T ss_dssp             TTCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cccceEEEEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence            1134689888655543    2566778899999998875

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=96.61  E-value=0.0078  Score=52.48  Aligned_cols=82  Identities=22%  Similarity=0.251  Sum_probs=52.8

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHc---CCCeE-EecCCC-cccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GADNI-VKVSTN-LQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~---g~~~v-i~~~~~-~~~~~~~~~~~~~~~~~  253 (321)
                      .|+++||+|+ +++|...++.+...|+ .|++++++.++.+.+ +++   +.... +..+-. ..+..+.+.++.+. .+
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g   84 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGA-KVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRR-FG   84 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence            4789999998 9999999999999999 688888888775544 333   32221 111111 22233333333332 34


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|++.|.
T Consensus        85 ~iD~lvnnAg~   95 (280)
T 3tox_A           85 GLDTAFNNAGA   95 (280)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999883

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=96.60  E-value=0.0089  Score=52.07  Aligned_cols=79  Identities=22%  Similarity=0.210  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCCeE--EecCCCc-ccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADNI--VKVSTNL-QDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~~v--i~~~~~~-~~~~~~~~~~~~~~~  252 (321)
                      .+.++||+|+ |++|...++.+...|+ .|+++++++++.+.+.    +.+...+  +..+-.+ ++..+.+.++.+. .
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~-~  104 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL-M  104 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHH-c
Confidence            4689999998 9999999999988998 6888888877665432    3343222  2222221 2233333333322 2


Q ss_pred             CCccEEEEc
Q 020768          253 TGIDVSFDC  261 (321)
Q Consensus       253 ~~~d~vid~  261 (321)
                      +++|++|.+
T Consensus       105 g~iD~li~n  113 (286)
T 1xu9_A          105 GGLDMLILN  113 (286)
T ss_dssp             TSCSEEEEC
T ss_pred             CCCCEEEEC
Confidence            479999998

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.60  E-value=0.018  Score=49.64  Aligned_cols=82  Identities=17%  Similarity=0.302  Sum_probs=53.1

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HH----cCCCe-EEecCC-CcccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE----LGADN-IVKVST-NLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~----~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~  252 (321)
                      .++++||+|+ |++|...++.+...|+ .|++++++.++.+.+ ++    .+... .+..+- +..+..+.+.++.+. .
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~   97 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK-F   97 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            4788999998 9999999999999999 688888887665432 22    25432 222221 222333334443332 2


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      +++|++|++.|.
T Consensus        98 g~iD~lvnnAg~  109 (267)
T 1vl8_A           98 GKLDTVVNAAGI  109 (267)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999884

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=96.59  E-value=0.015  Score=49.46  Aligned_cols=81  Identities=22%  Similarity=0.326  Sum_probs=53.0

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCe--EEecCCC-cccHHHHHHHHHHHhCCCc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADN--IVKVSTN-LQDIAEEVEKIQKAMGTGI  255 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~--vi~~~~~-~~~~~~~~~~~~~~~~~~~  255 (321)
                      .+.++||+|+ |++|...++.+...|+ .|++++++.++.+.+ ++++...  .+..+-. ..+..+.+.++.+  .+++
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~~i   86 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGA-RLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEA--VAPV   86 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHH--HSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHh--hCCC
Confidence            4678999998 9999999999988998 688888887765543 4444322  2222211 2223333333332  2579


Q ss_pred             cEEEEcCCC
Q 020768          256 DVSFDCAGF  264 (321)
Q Consensus       256 d~vid~~g~  264 (321)
                      |++|.+.|.
T Consensus        87 d~li~~Ag~   95 (254)
T 2wsb_A           87 SILVNSAGI   95 (254)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEECCcc
Confidence            999999874

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=96.59  E-value=0.0083  Score=51.05  Aligned_cols=79  Identities=18%  Similarity=0.339  Sum_probs=51.2

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      .++++||+|+ |++|...++.+...|+ .|++++++.++.+.+.++.-...+..+-.+.   +.+.++.+. .+++|++|
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~-~~~id~lv   79 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVTKK---KQIDQFANE-VERLDVLF   79 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTCH---HHHHHHHHH-CSCCSEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhccCceEEEeeCCCH---HHHHHHHHH-hCCCCEEE
Confidence            4688999998 9999999999999998 6888888877665433332112222222111   223333222 35799999


Q ss_pred             EcCCC
Q 020768          260 DCAGF  264 (321)
Q Consensus       260 d~~g~  264 (321)
                      ++.|.
T Consensus        80 ~~Ag~   84 (246)
T 2ag5_A           80 NVAGF   84 (246)
T ss_dssp             ECCCC
T ss_pred             ECCcc
Confidence            99883

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=96.59  E-value=0.028  Score=48.68  Aligned_cols=81  Identities=20%  Similarity=0.238  Sum_probs=53.0

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HH----cCCCe-EEecCC-CcccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE----LGADN-IVKVST-NLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~----~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~  252 (321)
                      .|+++||+|+ +++|...++.+...|+ +|++++++.++.+.+ ++    .+... .+..+- +..+..+.+.++.+. .
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~  103 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKE-F  103 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            5789999998 9999999999999999 688888887654432 22    34332 222221 222333344444333 3


Q ss_pred             CCccEEEEcCC
Q 020768          253 TGIDVSFDCAG  263 (321)
Q Consensus       253 ~~~d~vid~~g  263 (321)
                      +++|++|++.|
T Consensus       104 g~id~lv~nAg  114 (277)
T 4fc7_A          104 GRIDILINCAA  114 (277)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            57999999998

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=96.58  E-value=0.0097  Score=49.65  Aligned_cols=96  Identities=17%  Similarity=0.276  Sum_probs=60.4

Q ss_pred             CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 020768          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  261 (321)
                      .+|||+|+ |.+|...++.+...|. .|+++++++++.+.+. -++ .++..  +..+. +.+.++.    .++|+||.+
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-~~~-~~~~~--Dl~d~-~~~~~~~----~~~d~vi~~   74 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGF-EVTAVVRHPEKIKIEN-EHL-KVKKA--DVSSL-DEVCEVC----KGADAVISA   74 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTC-EEEEECSCGGGCCCCC-TTE-EEECC--CTTCH-HHHHHHH----TTCSEEEEC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC-EEEEEEcCcccchhcc-Cce-EEEEe--cCCCH-HHHHHHh----cCCCEEEEe
Confidence            58999998 9999999999999998 7888888876643211 111 12221  11222 2333332    369999999


Q ss_pred             CCCH-----------HHHHHHHHHcccC--CEEEEEcCCC
Q 020768          262 AGFN-----------KTMSTALSATRAG--GKVCLVGMGH  288 (321)
Q Consensus       262 ~g~~-----------~~~~~~~~~l~~~--G~~v~~g~~~  288 (321)
                      +|..           .....+++.++..  .+++.++...
T Consensus        75 a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~  114 (227)
T 3dhn_A           75 FNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAG  114 (227)
T ss_dssp             CCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECCST
T ss_pred             CcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChh
Confidence            9864           1233455555544  4899888643

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=96.58  E-value=0.018  Score=48.69  Aligned_cols=82  Identities=22%  Similarity=0.303  Sum_probs=52.9

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-H----cCCCe-EEecCC-CcccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-E----LGADN-IVKVST-NLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~----~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~  252 (321)
                      .+.++||+|+ |++|...++.+...|+ .|++++++.++.+.+. +    .+... .+..+- +..+..+.+.++.+. .
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   83 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGS-TVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL-V   83 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHh-c
Confidence            4678999998 9999999999888998 6888888876655332 2    34332 222221 222333334433332 3


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      +++|++|.+.|.
T Consensus        84 ~~~d~vi~~Ag~   95 (248)
T 2pnf_A           84 DGIDILVNNAGI   95 (248)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            579999999873

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=96.58  E-value=0.009  Score=51.03  Aligned_cols=104  Identities=20%  Similarity=0.245  Sum_probs=68.7

Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHhC
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~~~~  252 (321)
                      .+.++.+||-+|+|. |..++.+++.++ ...+++++.+++..+.+++    .|...-+.+..  .+..+.+..+  ...
T Consensus        60 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~--~d~~~~l~~~--~~~  134 (248)
T 3tfw_A           60 RLTQAKRILEIGTLG-GYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLRE--GPALQSLESL--GEC  134 (248)
T ss_dssp             HHHTCSEEEEECCTT-SHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEE--SCHHHHHHTC--CSC
T ss_pred             hhcCCCEEEEecCCc-hHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--cCHHHHHHhc--CCC
Confidence            446789999999865 788888898874 4489999999988887764    36542111111  2333322221  012


Q ss_pred             CCccEEEEcCCC---HHHHHHHHHHcccCCEEEEEcC
Q 020768          253 TGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       253 ~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      ..+|+|+-....   ...++.+.+.|++||.++.-..
T Consensus       135 ~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~~  171 (248)
T 3tfw_A          135 PAFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDNV  171 (248)
T ss_dssp             CCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred             CCeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence            479999943332   3468888999999999987664

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=96.56  E-value=0.025  Score=49.51  Aligned_cols=81  Identities=15%  Similarity=0.190  Sum_probs=52.5

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHc----CCCe-EEecCCC-cccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL----GADN-IVKVSTN-LQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~----g~~~-vi~~~~~-~~~~~~~~~~~~~~~~  252 (321)
                      .+.++||+|+ |++|...+..+...|+ .|++++++.++.+.+ +++    +... .+..+-. ..+..+.+.++.+. .
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~  102 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV-A  102 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH-T
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHH-c
Confidence            4678999998 9999999999999998 688888887665432 222    4322 2222211 22333333333332 4


Q ss_pred             CCccEEEEcCC
Q 020768          253 TGIDVSFDCAG  263 (321)
Q Consensus       253 ~~~d~vid~~g  263 (321)
                      +.+|++|.+.|
T Consensus       103 g~id~li~~Ag  113 (302)
T 1w6u_A          103 GHPNIVINNAA  113 (302)
T ss_dssp             CSCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            57999999988

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.56  E-value=0.031  Score=51.56  Aligned_cols=98  Identities=15%  Similarity=0.151  Sum_probs=69.8

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      .+++|+|.|.|.+|...++.++..|. .|++++.++++.+.+++.|...+.- +..+   .+.+++   .+-..+|++|-
T Consensus         3 ~~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~~g~~vi~G-Dat~---~~~L~~---agi~~A~~viv   74 (413)
T 3l9w_A            3 HGMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPDHIETLRKFGMKVFYG-DATR---MDLLES---AGAAKAEVLIN   74 (413)
T ss_dssp             -CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHTTCCCEES-CTTC---HHHHHH---TTTTTCSEEEE
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHhCCCeEEEc-CCCC---HHHHHh---cCCCccCEEEE
Confidence            45689999999999999999999999 6999999999999999988764432 2211   222332   23457899999


Q ss_pred             cCCCHHHHHH---HHHHcccCCEEEEEcC
Q 020768          261 CAGFNKTMST---ALSATRAGGKVCLVGM  286 (321)
Q Consensus       261 ~~g~~~~~~~---~~~~l~~~G~~v~~g~  286 (321)
                      +++++..-..   ..+.+.++-+++.-..
T Consensus        75 ~~~~~~~n~~i~~~ar~~~p~~~Iiara~  103 (413)
T 3l9w_A           75 AIDDPQTNLQLTEMVKEHFPHLQIIARAR  103 (413)
T ss_dssp             CCSSHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred             CCCChHHHHHHHHHHHHhCCCCeEEEEEC
Confidence            9998654333   3344556667766553

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=96.55  E-value=0.011  Score=50.72  Aligned_cols=82  Identities=21%  Similarity=0.199  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHc---CCCe-EEecCC-CcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~---g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      .++++||+|+ |++|...++.+...|+ .|++++++.++.+.+ +++   +... .+..+- +..+..+.+.++.+...+
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   82 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGA-TVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQG   82 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            4678999998 9999999999999998 688888887665433 222   4321 222221 122333333333222145


Q ss_pred             CccEEEEcCC
Q 020768          254 GIDVSFDCAG  263 (321)
Q Consensus       254 ~~d~vid~~g  263 (321)
                      ++|++|++.|
T Consensus        83 ~id~lvnnAg   92 (260)
T 2qq5_A           83 RLDVLVNNAY   92 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CceEEEECCc
Confidence            7999999994

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=96.55  E-value=0.0083  Score=52.04  Aligned_cols=103  Identities=17%  Similarity=0.204  Sum_probs=70.2

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHc-CCCeEEEEeCChhHHHHHHHc-----CCCeEEecCCCcccHHHHHHHH
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKEL-----GADNIVKVSTNLQDIAEEVEKI  247 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~-g~~~vv~v~~~~~~~~~~~~~-----g~~~vi~~~~~~~~~~~~~~~~  247 (321)
                      ++...++++++||-.|+| .|..+..+++.. ....+++++.+++..+.+++.     |.+.+.....+   +.+    .
T Consensus       103 ~~~~~~~~~~~VLD~G~G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d---~~~----~  174 (275)
T 1yb2_A          103 IMRCGLRPGMDILEVGVG-SGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSD---IAD----F  174 (275)
T ss_dssp             ---CCCCTTCEEEEECCT-TSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSC---TTT----C
T ss_pred             HHHcCCCCcCEEEEecCC-CCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECc---hhc----c
Confidence            355678999999999986 477778888873 233799999999988877653     54332222111   111    0


Q ss_pred             HHHhCCCccEEEEcCCCH-HHHHHHHHHcccCCEEEEEcC
Q 020768          248 QKAMGTGIDVSFDCAGFN-KTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       248 ~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~  286 (321)
                        .....+|+|+-....+ ..++.+.+.|+++|+++....
T Consensus       175 --~~~~~fD~Vi~~~~~~~~~l~~~~~~LkpgG~l~i~~~  212 (275)
T 1yb2_A          175 --ISDQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYLP  212 (275)
T ss_dssp             --CCSCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred             --CcCCCccEEEEcCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence              0134699999876654 568899999999999988763

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=96.54  E-value=0.013  Score=50.62  Aligned_cols=81  Identities=22%  Similarity=0.208  Sum_probs=50.1

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCe-EEecCCC-cccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~  253 (321)
                      .+.++||+|+ |++|...+..+...|+ .|++++++.++.+.+    ++.+... .+..+-. ..+..+.+.++.+. .+
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~g  110 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGA-DVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKD-FG  110 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTC-EEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHH-hC
Confidence            4688999998 9999999888888898 677777776543322    2334332 2222211 22333334433332 24


Q ss_pred             CccEEEEcCC
Q 020768          254 GIDVSFDCAG  263 (321)
Q Consensus       254 ~~d~vid~~g  263 (321)
                      .+|++|.+.|
T Consensus       111 ~id~li~~Ag  120 (279)
T 3ctm_A          111 TIDVFVANAG  120 (279)
T ss_dssp             CCSEEEECGG
T ss_pred             CCCEEEECCc
Confidence            6999999887

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=96.54  E-value=0.0083  Score=50.18  Aligned_cols=100  Identities=17%  Similarity=0.139  Sum_probs=68.4

Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHHH----cC-----CCeEEecCCCcccHHHHHHHH
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKE----LG-----ADNIVKVSTNLQDIAEEVEKI  247 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~~----~g-----~~~vi~~~~~~~~~~~~~~~~  247 (321)
                      .++++++||-+|+|. |..+..+++..|. ..+++++.+++..+.+++    .+     .+.+.....   +....   .
T Consensus        74 ~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~---d~~~~---~  146 (226)
T 1i1n_A           74 QLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVG---DGRMG---Y  146 (226)
T ss_dssp             TSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEES---CGGGC---C
T ss_pred             hCCCCCEEEEEcCCc-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEEC---CcccC---c
Confidence            478999999999875 8888888888763 279999999988887753    22     122211111   11100   0


Q ss_pred             HHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcC
Q 020768          248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       248 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                        .....+|+|+....-...+..+.+.|+++|++++.-.
T Consensus       147 --~~~~~fD~i~~~~~~~~~~~~~~~~LkpgG~lv~~~~  183 (226)
T 1i1n_A          147 --AEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPVG  183 (226)
T ss_dssp             --GGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEES
T ss_pred             --ccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEe
Confidence              0135699999877666677899999999999887643

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=96.54  E-value=0.012  Score=49.42  Aligned_cols=81  Identities=20%  Similarity=0.185  Sum_probs=51.7

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-----HcCCCeE-EecCCC-cccHHHHHHHHHHHhCC
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-----ELGADNI-VKVSTN-LQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-----~~g~~~v-i~~~~~-~~~~~~~~~~~~~~~~~  253 (321)
                      ++++||+|+ |++|...++.+...|+ .|+.++++.++.+.+.     ..+.... +..+-. ..+..+.+.++.+. .+
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~g   79 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGY-ALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLER-FG   79 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHH-HS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHh-cC
Confidence            678999998 9999999999999999 6888888877655432     3343322 222221 22233333333222 24


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|.+.|.
T Consensus        80 ~id~li~~Ag~   90 (235)
T 3l77_A           80 DVDVVVANAGL   90 (235)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999999884

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=96.53  E-value=0.024  Score=49.35  Aligned_cols=82  Identities=20%  Similarity=0.239  Sum_probs=50.9

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeC-ChhHHHHH-HHc----CCCe-EEecCC-CcccHHHHHHHHHHHh
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV-DDYRLSVA-KEL----GADN-IVKVST-NLQDIAEEVEKIQKAM  251 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~-~~~~~~~~-~~~----g~~~-vi~~~~-~~~~~~~~~~~~~~~~  251 (321)
                      .++++||+|+ +++|...++.+...|+ .|+++++ +.++.+.+ +++    +... .+..+- +..+..+.+.++.+. 
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-  101 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADR-  101 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHH-
Confidence            4689999998 9999999999999999 6777776 44443332 222    2222 121111 122333334444332 


Q ss_pred             CCCccEEEEcCCC
Q 020768          252 GTGIDVSFDCAGF  264 (321)
Q Consensus       252 ~~~~d~vid~~g~  264 (321)
                      .+++|++|++.|.
T Consensus       102 ~g~iD~lv~nAg~  114 (281)
T 3v2h_A          102 FGGADILVNNAGV  114 (281)
T ss_dssp             TSSCSEEEECCCC
T ss_pred             CCCCCEEEECCCC
Confidence            4579999999884

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=96.52  E-value=0.037  Score=47.60  Aligned_cols=83  Identities=17%  Similarity=0.262  Sum_probs=49.8

Q ss_pred             CCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEe-CChhHHHHH----HHcCCC-eEEecCC-CcccHHHHHHHHHHHh
Q 020768          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVD-VDDYRLSVA----KELGAD-NIVKVST-NLQDIAEEVEKIQKAM  251 (321)
Q Consensus       180 ~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~-~~~~~~~~~----~~~g~~-~vi~~~~-~~~~~~~~~~~~~~~~  251 (321)
                      ..++++||+|+ +++|...++.+...|+ .|++++ ++.++.+..    +..+.. ..+..+- +..+..+.+.++.+. 
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-  100 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGM-AVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLAD-  100 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH-
Confidence            45788999998 9999999999988999 566665 444443322    222322 2222222 222333334444332 


Q ss_pred             CCCccEEEEcCCC
Q 020768          252 GTGIDVSFDCAGF  264 (321)
Q Consensus       252 ~~~~d~vid~~g~  264 (321)
                      .+++|++|.+.|.
T Consensus       101 ~g~id~li~nAg~  113 (269)
T 3gk3_A          101 FGKVDVLINNAGI  113 (269)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence            2479999999884

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=96.52  E-value=0.0089  Score=50.95  Aligned_cols=77  Identities=18%  Similarity=0.227  Sum_probs=49.3

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      .++++||+|+ |++|...++.+...|+ .|++++++.++.+.+.  +  ...|+. +.++..+.+.++.+. .+++|++|
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~--~--~~~D~~-~~~~~~~~~~~~~~~-~g~id~lv   86 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLF--G--VEVDVT-DSDAVDRAFTAVEEH-QGPVEVLV   86 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSE--E--EECCTT-CHHHHHHHHHHHHHH-HSSCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHhc--C--eeccCC-CHHHHHHHHHHHHHH-cCCCCEEE
Confidence            4678999998 9999999999988998 6777777765432211  1  112222 222333334443332 35799999


Q ss_pred             EcCCC
Q 020768          260 DCAGF  264 (321)
Q Consensus       260 d~~g~  264 (321)
                      ++.|.
T Consensus        87 ~~Ag~   91 (247)
T 1uzm_A           87 SNAGL   91 (247)
T ss_dssp             EECSC
T ss_pred             ECCCC
Confidence            99884

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=96.52  E-value=0.0063  Score=51.90  Aligned_cols=109  Identities=17%  Similarity=0.202  Sum_probs=62.4

Q ss_pred             CCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEE-EeCChhHHHH-H---HHcCCCe-EEecCCC-cccHHHHHHHHHHHh
Q 020768          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVI-VDVDDYRLSV-A---KELGADN-IVKVSTN-LQDIAEEVEKIQKAM  251 (321)
Q Consensus       180 ~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~-v~~~~~~~~~-~---~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~  251 (321)
                      -.++++||+|+ +++|...++.+...|+ .|++ ..++.++.+. +   ++.+... .+..+-. ..+..+.+.++.+..
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL   83 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHh
Confidence            35789999998 9999999999999999 4555 4555544332 2   2333321 1222111 122222222222211


Q ss_pred             -----CCCccEEEEcCCCH----------H---------------HHHHHHHHcccCCEEEEEcCCCC
Q 020768          252 -----GTGIDVSFDCAGFN----------K---------------TMSTALSATRAGGKVCLVGMGHL  289 (321)
Q Consensus       252 -----~~~~d~vid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~~~  289 (321)
                           ...+|++|.+.|..          +               ..+.++..++.+|+++.+++...
T Consensus        84 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~  151 (255)
T 3icc_A           84 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT  151 (255)
T ss_dssp             HHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGG
T ss_pred             cccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhh
Confidence                 23599999998742          1               12333344556799999986533

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=96.51  E-value=0.013  Score=47.15  Aligned_cols=102  Identities=20%  Similarity=0.248  Sum_probs=69.8

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCC-CeEEecCCCcccHHHHHHHHH
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGA-DNIVKVSTNLQDIAEEVEKIQ  248 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~-~~vi~~~~~~~~~~~~~~~~~  248 (321)
                      ++...+.++++||-+|+|. |..+..+++..  ..+++++.+++..+.+++    .+. ..+....   .+..+.+.   
T Consensus        26 ~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~---~d~~~~~~---   96 (192)
T 1l3i_A           26 MCLAEPGKNDVAVDVGCGT-GGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLME---GDAPEALC---   96 (192)
T ss_dssp             HHHHCCCTTCEEEEESCTT-SHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEE---SCHHHHHT---
T ss_pred             HHhcCCCCCCEEEEECCCC-CHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEe---cCHHHhcc---
Confidence            4556788999999999876 88888888766  489999999988887765    444 2221111   22222111   


Q ss_pred             HHhCCCccEEEEcCCC---HHHHHHHHHHcccCCEEEEEcC
Q 020768          249 KAMGTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       249 ~~~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                        ....+|+|+....-   ...+..+.+.|+++|+++....
T Consensus        97 --~~~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~~  135 (192)
T 1l3i_A           97 --KIPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTAI  135 (192)
T ss_dssp             --TSCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             --cCCCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEec
Confidence              11479999976431   4577888899999999988753

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=96.51  E-value=0.013  Score=52.53  Aligned_cols=90  Identities=19%  Similarity=0.211  Sum_probs=62.6

Q ss_pred             CEEEEEcCChhHHHHHHHHH-H-cCCCeEEEEeCChhHHH-HHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          183 TNVLIMGAGPIGLVTMLGAR-A-FGAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~-~-~g~~~vv~v~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      -+|.|+|+|.+|...++.++ . .+++.+.+++.++++.+ +++++|...+..      ++.    ++.+  ...+|+|+
T Consensus         9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~------~~~----~~l~--~~~~D~V~   76 (346)
T 3cea_A            9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYT------NYK----DMID--TENIDAIF   76 (346)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEES------CHH----HHHT--TSCCSEEE
T ss_pred             ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccC------CHH----HHhc--CCCCCEEE
Confidence            47899999999998888776 4 36644556788887765 456678754332      222    2211  34799999


Q ss_pred             EcCCCHHHHHHHHHHcccCCEEEEEc
Q 020768          260 DCAGFNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       260 d~~g~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      .|++...+.+.+..+|+.|-. +++.
T Consensus        77 i~tp~~~h~~~~~~al~~G~~-v~~e  101 (346)
T 3cea_A           77 IVAPTPFHPEMTIYAMNAGLN-VFCE  101 (346)
T ss_dssp             ECSCGGGHHHHHHHHHHTTCE-EEEC
T ss_pred             EeCChHhHHHHHHHHHHCCCE-EEEc
Confidence            999988888888888887644 4454

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=96.51  E-value=0.0088  Score=49.42  Aligned_cols=99  Identities=21%  Similarity=0.170  Sum_probs=69.9

Q ss_pred             cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      ..+.++.+||-+|+|. |..+..+++. |. .+++++.+++..+.+++.+...+.....+..++         .....+|
T Consensus        42 ~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~---------~~~~~~D  109 (218)
T 3ou2_A           42 RAGNIRGDVLELASGT-GYWTRHLSGL-AD-RVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW---------TPDRQWD  109 (218)
T ss_dssp             TTTTSCSEEEEESCTT-SHHHHHHHHH-SS-EEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC---------CCSSCEE
T ss_pred             hcCCCCCeEEEECCCC-CHHHHHHHhc-CC-eEEEEeCCHHHHHHHHhcCCCCeEEEecccccC---------CCCCcee
Confidence            4478889999999865 7777777777 66 799999999999999886644332211111111         1246799


Q ss_pred             EEEEcCCC--------HHHHHHHHHHcccCCEEEEEcCC
Q 020768          257 VSFDCAGF--------NKTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       257 ~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      +|+....-        ...+..+.+.|+++|.+++....
T Consensus       110 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~  148 (218)
T 3ou2_A          110 AVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVT  148 (218)
T ss_dssp             EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred             EEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence            99974321        35678889999999999888643

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=96.50  E-value=0.019  Score=47.78  Aligned_cols=106  Identities=21%  Similarity=0.225  Sum_probs=69.3

Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHhC
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~~~~  252 (321)
                      ...++.+||=+|+| .|..++.+++... ...+++++.+++..+.+++    .|....+.+..  .+..+.+..+.....
T Consensus        55 ~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~--~d~~~~~~~~~~~~~  131 (223)
T 3duw_A           55 QIQGARNILEIGTL-GGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRT--GLALDSLQQIENEKY  131 (223)
T ss_dssp             HHHTCSEEEEECCT-TSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE--SCHHHHHHHHHHTTC
T ss_pred             HhhCCCEEEEecCC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--cCHHHHHHHHHhcCC
Confidence            34578899999986 4778888888863 2389999999988777653    45532111111  233333434332212


Q ss_pred             CCccEEEEcCCC---HHHHHHHHHHcccCCEEEEEcC
Q 020768          253 TGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       253 ~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      ..+|+|+-....   ...++.+.+.|++||.++.-..
T Consensus       132 ~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~  168 (223)
T 3duw_A          132 EPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDNV  168 (223)
T ss_dssp             CCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEESC
T ss_pred             CCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence            569999954432   3467888999999998887664

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=96.49  E-value=0.0041  Score=52.60  Aligned_cols=98  Identities=14%  Similarity=0.152  Sum_probs=61.5

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      ..+|||+|+ |.+|...++.+...| . .|+++++++++.+.+..-++. ++..+-  .+ .+.+.++.    .++|+||
T Consensus        23 mk~vlVtGatG~iG~~l~~~L~~~G~~-~V~~~~R~~~~~~~~~~~~~~-~~~~Dl--~d-~~~~~~~~----~~~D~vv   93 (236)
T 3qvo_A           23 MKNVLILGAGGQIARHVINQLADKQTI-KQTLFARQPAKIHKPYPTNSQ-IIMGDV--LN-HAALKQAM----QGQDIVY   93 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTE-EEEEEESSGGGSCSSCCTTEE-EEECCT--TC-HHHHHHHH----TTCSEEE
T ss_pred             ccEEEEEeCCcHHHHHHHHHHHhCCCc-eEEEEEcChhhhcccccCCcE-EEEecC--CC-HHHHHHHh----cCCCEEE
Confidence            357999998 999999999999899 6 688888887664322211221 222111  12 22333332    3689999


Q ss_pred             EcCCCHHH---HHHHHHHcccC--CEEEEEcCCC
Q 020768          260 DCAGFNKT---MSTALSATRAG--GKVCLVGMGH  288 (321)
Q Consensus       260 d~~g~~~~---~~~~~~~l~~~--G~~v~~g~~~  288 (321)
                      .+.+....   .+.+++.++..  ++|+.++...
T Consensus        94 ~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~  127 (236)
T 3qvo_A           94 ANLTGEDLDIQANSVIAAMKACDVKRLIFVLSLG  127 (236)
T ss_dssp             EECCSTTHHHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred             EcCCCCchhHHHHHHHHHHHHcCCCEEEEEecce
Confidence            98886432   34455555443  6899998643

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=96.49  E-value=0.024  Score=48.26  Aligned_cols=81  Identities=23%  Similarity=0.425  Sum_probs=51.8

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCe-EEecCCC-cccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~  253 (321)
                      .+.++||+|+ |++|...++.+...|+ .|++++++.++.+.+    ++.+... .+..+-. ..+..+.+.++.+. .+
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   89 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQ-EG   89 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH-cC
Confidence            4688999998 9999999999988998 688888887654432    2234322 2222211 22333333333322 24


Q ss_pred             CccEEEEcCC
Q 020768          254 GIDVSFDCAG  263 (321)
Q Consensus       254 ~~d~vid~~g  263 (321)
                      ++|++|.+.|
T Consensus        90 ~id~vi~~Ag   99 (260)
T 3awd_A           90 RVDILVACAG   99 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=96.48  E-value=0.018  Score=49.21  Aligned_cols=103  Identities=18%  Similarity=0.192  Sum_probs=66.0

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCCh--hHHHHHHHcCCCeEE-ecCCCcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD--YRLSVAKELGADNIV-KVSTNLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~--~~~~~~~~~g~~~vi-~~~~~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .|+++||+|+ +++|...++.+...|+ +|++++++.  +..+.+++.|..... ..+-.+++.   ++++.+  .+++|
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~---v~~~~~--~g~iD   81 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAPDETLDIIAKDGGNASALLIDFADPLA---AKDSFT--DAGFD   81 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTT---TTTSST--TTCCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHH---HHHHHH--hCCCC
Confidence            4889999988 9999999999999999 577777764  445566677754322 111111111   111111  35799


Q ss_pred             EEEEcCCCHH-------------------------HHHHHHHHc-c--cCCEEEEEcCCCC
Q 020768          257 VSFDCAGFNK-------------------------TMSTALSAT-R--AGGKVCLVGMGHL  289 (321)
Q Consensus       257 ~vid~~g~~~-------------------------~~~~~~~~l-~--~~G~~v~~g~~~~  289 (321)
                      +++++.|...                         ..+.++..+ +  .+|+|+.+++..+
T Consensus        82 iLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~  142 (247)
T 4hp8_A           82 ILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLS  142 (247)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG
T ss_pred             EEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhh
Confidence            9999998531                         234445544 3  3689999986433

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=96.48  E-value=0.0079  Score=50.03  Aligned_cols=96  Identities=15%  Similarity=0.160  Sum_probs=60.3

Q ss_pred             EEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcC
Q 020768          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (321)
Q Consensus       184 ~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  262 (321)
                      +|||+|+ |.+|...++.+...|. .|++++++.++.+..  .++ .++..+  ..+..+.+.+.    -.++|+||.++
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~--~~~-~~~~~D--~~d~~~~~~~~----~~~~d~vi~~a   71 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDY-QIYAGARKVEQVPQY--NNV-KAVHFD--VDWTPEEMAKQ----LHGMDAIINVS   71 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSC-EEEEEESSGGGSCCC--TTE-EEEECC--TTSCHHHHHTT----TTTCSEEEECC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCccchhhc--CCc-eEEEec--ccCCHHHHHHH----HcCCCEEEECC
Confidence            6999998 9999999999999998 688888887664322  122 222221  12212233332    24799999999


Q ss_pred             CCHH---------HHHHHHHHcccC--CEEEEEcCCCC
Q 020768          263 GFNK---------TMSTALSATRAG--GKVCLVGMGHL  289 (321)
Q Consensus       263 g~~~---------~~~~~~~~l~~~--G~~v~~g~~~~  289 (321)
                      |...         ....+++.++..  ++++.++....
T Consensus        72 g~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~  109 (219)
T 3dqp_A           72 GSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFS  109 (219)
T ss_dssp             CCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTT
T ss_pred             cCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccc
Confidence            8532         133444444443  58999886543

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=96.48  E-value=0.0065  Score=50.88  Aligned_cols=88  Identities=14%  Similarity=0.119  Sum_probs=57.9

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      .++++||+|+ +++|...++.+...|+ .|++++++.+             .|..+ .++..+.+.+    . +++|+++
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~-------------~D~~~-~~~v~~~~~~----~-g~id~lv   64 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHT-IVHVASRQTG-------------LDISD-EKSVYHYFET----I-GAFDHLI   64 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTE-EEEEESGGGT-------------CCTTC-HHHHHHHHHH----H-CSEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEecCCcc-------------cCCCC-HHHHHHHHHH----h-CCCCEEE
Confidence            4678999998 9999999998888898 6777766554             12221 1222222222    1 5689999


Q ss_pred             EcCCCH--------------------------HHHHHHHHHcccCCEEEEEcCCC
Q 020768          260 DCAGFN--------------------------KTMSTALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       260 d~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~~  288 (321)
                      .+.|..                          ...+.++..++++|+++.+++..
T Consensus        65 ~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~  119 (223)
T 3uce_A           65 VTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGML  119 (223)
T ss_dssp             ECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGG
T ss_pred             ECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchh
Confidence            988842                          02344455666789999998643

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=96.47  E-value=0.02  Score=49.01  Aligned_cols=82  Identities=23%  Similarity=0.330  Sum_probs=53.4

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHH-HHHHcCCCe-EEecCCC-cccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADN-IVKVSTN-LQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~-~~~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .+.++||+|+ |++|...++.+...|+ .|++++++.++.+ ..++++... .+..+-. .++..+.+.++.+. .+++|
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~g~id   88 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGK-FGRVD   88 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHH-HSCCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHH-CCCCC
Confidence            4689999998 9999999999999999 6777777766554 344555432 2222221 22333334443332 24799


Q ss_pred             EEEEcCCC
Q 020768          257 VSFDCAGF  264 (321)
Q Consensus       257 ~vid~~g~  264 (321)
                      ++|.+.|.
T Consensus        89 ~li~~Ag~   96 (265)
T 2o23_A           89 VAVNCAGI   96 (265)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999873

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=96.45  E-value=0.029  Score=47.29  Aligned_cols=78  Identities=26%  Similarity=0.190  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-HcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      .+.++||+|+ |++|...++.+...|+ .|++++++.++.+.+. +..-..++..+-.  + .+.+.++.+ ..+++|++
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~--~-~~~~~~~~~-~~~~id~v   80 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDLG--D-WDATEKALG-GIGPVDLL   80 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTT--C-HHHHHHHHT-TCCCCSEE
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCCcEEecCC--C-HHHHHHHHH-HcCCCCEE
Confidence            4679999998 9999999999999999 6888888877665443 3322223322222  2 223333332 23468999


Q ss_pred             EEcCC
Q 020768          259 FDCAG  263 (321)
Q Consensus       259 id~~g  263 (321)
                      |.+.|
T Consensus        81 i~~Ag   85 (244)
T 1cyd_A           81 VNNAA   85 (244)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99988

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=96.45  E-value=0.0073  Score=52.48  Aligned_cols=96  Identities=14%  Similarity=0.085  Sum_probs=60.9

Q ss_pred             EEEEEcC-ChhHHHHHHHHHHc-CCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 020768          184 NVLIMGA-GPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (321)
Q Consensus       184 ~vlI~Ga-g~vG~~a~qla~~~-g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  261 (321)
                      +|||+|+ |.+|...++.+... |. .|+++.+++++...+...++.. +..+-  .+. +.+.+.    -.++|+||.+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~-~V~~~~R~~~~~~~~~~~~v~~-~~~D~--~d~-~~l~~~----~~~~d~vi~~   72 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHID-HFHIGVRNVEKVPDDWRGKVSV-RQLDY--FNQ-ESMVEA----FKGMDTVVFI   72 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCT-TEEEEESSGGGSCGGGBTTBEE-EECCT--TCH-HHHHHH----TTTCSEEEEC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCC-cEEEEECCHHHHHHhhhCCCEE-EEcCC--CCH-HHHHHH----HhCCCEEEEe
Confidence            5899998 99999999988877 77 5777778877654333334332 22221  122 233333    2579999999


Q ss_pred             CCCH-------HHHHHHHHHcccC--CEEEEEcCCC
Q 020768          262 AGFN-------KTMSTALSATRAG--GKVCLVGMGH  288 (321)
Q Consensus       262 ~g~~-------~~~~~~~~~l~~~--G~~v~~g~~~  288 (321)
                      .+..       .....+++.++..  ++++.+++.+
T Consensus        73 a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~  108 (289)
T 3e48_A           73 PSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYA  108 (289)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred             CCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence            8852       2334556666554  4888888654

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=96.45  E-value=0.013  Score=50.71  Aligned_cols=80  Identities=18%  Similarity=0.207  Sum_probs=49.7

Q ss_pred             CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCC--C-eEEecCCCc-ccHHHHHHHHHHHhCCCcc
Q 020768          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGA--D-NIVKVSTNL-QDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~--~-~vi~~~~~~-~~~~~~~~~~~~~~~~~~d  256 (321)
                      +++||+|+ |++|...++.+...|+ .|++++++.++.+.+ +++..  . ..+..+-.+ ++..+.+.++.+ ..+++|
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~-~~g~iD   99 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGW-SLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPE-EFATLR   99 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCG-GGSSCC
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHH-HhCCCC
Confidence            78999998 9999999999999999 688888887776544 33432  1 122222111 122222222111 124689


Q ss_pred             EEEEcCCC
Q 020768          257 VSFDCAGF  264 (321)
Q Consensus       257 ~vid~~g~  264 (321)
                      ++|++.|.
T Consensus       100 ~lvnnAG~  107 (272)
T 2nwq_A          100 GLINNAGL  107 (272)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.44  E-value=0.037  Score=48.39  Aligned_cols=86  Identities=14%  Similarity=0.132  Sum_probs=62.4

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCC
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  263 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  263 (321)
                      +|.|+|+|.+|...+..+...|. .|.+.++++++.+.+.+.|...   .    .+..+.+        ...|+||.|+.
T Consensus         7 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~----~~~~~~~--------~~~D~vi~~v~   70 (299)
T 1vpd_A            7 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAET---A----STAKAIA--------EQCDVIITMLP   70 (299)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE---C----SSHHHHH--------HHCSEEEECCS
T ss_pred             eEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCee---c----CCHHHHH--------hCCCEEEEECC
Confidence            79999999999999888888898 6888899998888877766431   1    1222222        13799999999


Q ss_pred             CHHHHHHHH-------HHcccCCEEEEEc
Q 020768          264 FNKTMSTAL-------SATRAGGKVCLVG  285 (321)
Q Consensus       264 ~~~~~~~~~-------~~l~~~G~~v~~g  285 (321)
                      .+..+...+       ..++++..++.++
T Consensus        71 ~~~~~~~~~~~~~~l~~~l~~~~~vv~~s   99 (299)
T 1vpd_A           71 NSPHVKEVALGENGIIEGAKPGTVLIDMS   99 (299)
T ss_dssp             SHHHHHHHHHSTTCHHHHCCTTCEEEECS
T ss_pred             CHHHHHHHHhCcchHhhcCCCCCEEEECC
Confidence            766555554       5577777776665

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=96.44  E-value=0.018  Score=49.71  Aligned_cols=82  Identities=17%  Similarity=0.087  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeC-ChhHHHHH-HHc----CCCe-EEecCC-Cc----ccHHHHHHHH
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV-DDYRLSVA-KEL----GADN-IVKVST-NL----QDIAEEVEKI  247 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~-~~~~~~~~-~~~----g~~~-vi~~~~-~~----~~~~~~~~~~  247 (321)
                      .+.++||+|+ |++|...+..+...|+ .|+++++ +.++.+.+ +++    +... .+..+- +.    .+..+.+.++
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   88 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCS   88 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHH
Confidence            4678999998 9999999999989999 6888877 76655433 222    4322 222221 12    2333333333


Q ss_pred             HHHhCCCccEEEEcCCC
Q 020768          248 QKAMGTGIDVSFDCAGF  264 (321)
Q Consensus       248 ~~~~~~~~d~vid~~g~  264 (321)
                      .+. .+++|++|++.|.
T Consensus        89 ~~~-~g~id~lv~nAg~  104 (276)
T 1mxh_A           89 FRA-FGRCDVLVNNASA  104 (276)
T ss_dssp             HHH-HSCCCEEEECCCC
T ss_pred             HHh-cCCCCEEEECCCC
Confidence            332 3479999999883

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=96.44  E-value=0.017  Score=48.99  Aligned_cols=82  Identities=18%  Similarity=0.241  Sum_probs=52.0

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCe-EEecCCC-cccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~  253 (321)
                      .+.++||+|+ |++|...++.+...|+ .|+++++++++.+.+    ++.+... .+..+-. ..+..+.+.++.+. .+
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   87 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK-LG   87 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHh-cC
Confidence            4688999998 9999999998888998 688888887665432    2234332 2222211 22233333333222 24


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|.+.|.
T Consensus        88 ~~d~vi~~Ag~   98 (255)
T 1fmc_A           88 KVDILVNNAGG   98 (255)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.43  E-value=0.042  Score=48.30  Aligned_cols=89  Identities=15%  Similarity=0.109  Sum_probs=63.4

Q ss_pred             CEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcC
Q 020768          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  262 (321)
                      .+|.|+|+|.+|...+..+...|. .|.+.++++++.+.+.+.|......   +..+.           -...|+||.|+
T Consensus         8 ~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~~~---~~~e~-----------~~~aDvvi~~v   72 (303)
T 3g0o_A            8 FHVGIVGLGSMGMGAARSCLRAGL-STWGADLNPQACANLLAEGACGAAA---SAREF-----------AGVVDALVILV   72 (303)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEES---SSTTT-----------TTTCSEEEECC
T ss_pred             CeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCCccccC---CHHHH-----------HhcCCEEEEEC
Confidence            579999999999999988888998 6889999999999888888654111   11110           13578888888


Q ss_pred             CCHHHHHHHH-------HHcccCCEEEEEcC
Q 020768          263 GFNKTMSTAL-------SATRAGGKVCLVGM  286 (321)
Q Consensus       263 g~~~~~~~~~-------~~l~~~G~~v~~g~  286 (321)
                      ..+......+       ..++++..++..+.
T Consensus        73 p~~~~~~~v~~~~~~l~~~l~~g~ivv~~st  103 (303)
T 3g0o_A           73 VNAAQVRQVLFGEDGVAHLMKPGSAVMVSST  103 (303)
T ss_dssp             SSHHHHHHHHC--CCCGGGSCTTCEEEECSC
T ss_pred             CCHHHHHHHHhChhhHHhhCCCCCEEEecCC
Confidence            8765555554       44566666665554

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.43  E-value=0.02  Score=48.83  Aligned_cols=74  Identities=23%  Similarity=0.210  Sum_probs=49.0

Q ss_pred             CCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       180 ~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      -.+.++||+|+ |++|...++.+...|+ .|++++++++.   +++++....+ .+- ..+..+.+.+    . .++|++
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~---~~~~~~~~~~-~D~-~~~~~~~~~~----~-~~iD~l   85 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEEL---LKRSGHRYVV-CDL-RKDLDLLFEK----V-KEVDIL   85 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHH---HHHTCSEEEE-CCT-TTCHHHHHHH----S-CCCSEE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHH---HHhhCCeEEE-eeH-HHHHHHHHHH----h-cCCCEE
Confidence            45789999998 9999999999988999 68888887643   3444422222 221 2233332222    1 279999


Q ss_pred             EEcCCC
Q 020768          259 FDCAGF  264 (321)
Q Consensus       259 id~~g~  264 (321)
                      |++.|.
T Consensus        86 v~~Ag~   91 (249)
T 1o5i_A           86 VLNAGG   91 (249)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999873

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=96.43  E-value=0.021  Score=48.90  Aligned_cols=82  Identities=16%  Similarity=0.140  Sum_probs=52.4

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-H---HcCCCe-EEecCC-CcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-K---ELGADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~---~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      .++++||+|+ |++|...++.+...|+ .|++++++.++.+.+ +   +.+... .+..+- +..+..+.+.+..+. .+
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g   90 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGA-HVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNL-HG   90 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence            4789999998 9999999999999999 688888887665432 2   234332 122221 122333333333322 35


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|++.|.
T Consensus        91 ~iD~lv~~Ag~  101 (260)
T 2zat_A           91 GVDILVSNAAV  101 (260)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.42  E-value=0.044  Score=47.70  Aligned_cols=88  Identities=16%  Similarity=0.144  Sum_probs=63.0

Q ss_pred             CEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcC
Q 020768          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  262 (321)
                      .+|.|+|+|.+|...++.+...|. .|.+.++++++.+.+.+.|+...       .+..+.+.        ..|+||.|+
T Consensus         2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~~~~~~~--------~aDvvi~~v   65 (287)
T 3pef_A            2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRSPEKAEELAALGAERA-------ATPCEVVE--------SCPVTFAML   65 (287)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEEC-------SSHHHHHH--------HCSEEEECC
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec-------CCHHHHHh--------cCCEEEEEc
Confidence            478999999999999998888998 68889999999888887775321       12222221        368999999


Q ss_pred             CCHHHHHHHH-------HHcccCCEEEEEcC
Q 020768          263 GFNKTMSTAL-------SATRAGGKVCLVGM  286 (321)
Q Consensus       263 g~~~~~~~~~-------~~l~~~G~~v~~g~  286 (321)
                      ..+......+       ..++++..++..+.
T Consensus        66 p~~~~~~~v~~~~~~l~~~l~~~~~vi~~st   96 (287)
T 3pef_A           66 ADPAAAEEVCFGKHGVLEGIGEGRGYVDMST   96 (287)
T ss_dssp             SSHHHHHHHHHSTTCHHHHCCTTCEEEECSC
T ss_pred             CCHHHHHHHHcCcchHhhcCCCCCEEEeCCC
Confidence            8755544444       56677777666653

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=96.42  E-value=0.024  Score=49.25  Aligned_cols=82  Identities=17%  Similarity=0.209  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HH---cCCCe-EEecCC-CcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~---~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      .+.++||+|+ |++|...++.+...|+ .|+++++++++.+.+ ++   .+... .+..+- +.++..+.+.++.+. .+
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~-~~  120 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE-HK  120 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH-CS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHh-cC
Confidence            3678999998 9999999998888898 577787776655432 22   24332 222221 122333333333322 45


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|.+.|.
T Consensus       121 ~id~li~~Ag~  131 (285)
T 2c07_A          121 NVDILVNNAGI  131 (285)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=96.40  E-value=0.015  Score=49.72  Aligned_cols=82  Identities=20%  Similarity=0.205  Sum_probs=48.6

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH-HHHcCCC-eEEecCC-CcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~-~~~~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .++++||+|+ +++|...++.+...|+ .|+++++++++.+. .++++.. ..+..+- +.++..+.+.++.+. .+++|
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~id   83 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGA-TVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQE-FGHVH   83 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHH-HSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH-cCCCC
Confidence            4788999998 9999999999999999 67888877766543 3445432 2222222 222333344444332 34799


Q ss_pred             EEEEcCCC
Q 020768          257 VSFDCAGF  264 (321)
Q Consensus       257 ~vid~~g~  264 (321)
                      ++|++.|.
T Consensus        84 ~lv~nAg~   91 (257)
T 3tpc_A           84 GLVNCAGT   91 (257)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999884

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=96.39  E-value=0.011  Score=49.57  Aligned_cols=103  Identities=19%  Similarity=0.152  Sum_probs=70.2

Q ss_pred             HHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCC--eEEecCCCcccHHHHHHHHHHH
Q 020768          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD--NIVKVSTNLQDIAEEVEKIQKA  250 (321)
Q Consensus       173 ~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~~~~~~~~~  250 (321)
                      .++...++++++||-+|+|. |..+..+++.. . .+++++.+++..+.+++....  .+.....   +..+.   +  .
T Consensus        62 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~-~-~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~---d~~~~---~--~  130 (231)
T 1vbf_A           62 MLDELDLHKGQKVLEIGTGI-GYYTALIAEIV-D-KVVSVEINEKMYNYASKLLSYYNNIKLILG---DGTLG---Y--E  130 (231)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHS-S-EEEEEESCHHHHHHHHHHHTTCSSEEEEES---CGGGC---C--G
T ss_pred             HHHhcCCCCCCEEEEEcCCC-CHHHHHHHHHc-C-EEEEEeCCHHHHHHHHHHHhhcCCeEEEEC---Ccccc---c--c
Confidence            34567788999999999976 88888888874 4 799999999998888764221  1111111   11110   0  0


Q ss_pred             hCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcC
Q 020768          251 MGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       251 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      ....+|+|+....-......+.+.|+++|++++.-.
T Consensus       131 ~~~~fD~v~~~~~~~~~~~~~~~~L~pgG~l~~~~~  166 (231)
T 1vbf_A          131 EEKPYDRVVVWATAPTLLCKPYEQLKEGGIMILPIG  166 (231)
T ss_dssp             GGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEEC
T ss_pred             cCCCccEEEECCcHHHHHHHHHHHcCCCcEEEEEEc
Confidence            135799999876544455688899999999988753

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=96.39  E-value=0.0046  Score=52.57  Aligned_cols=77  Identities=16%  Similarity=0.167  Sum_probs=46.0

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHH--HHHH--HhCCCc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVE--KIQK--AMGTGI  255 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~--~~~~--~~~~~~  255 (321)
                      .++++||+|+ |++|...++.+.. |. .|++++++.++.+.+.+..-...+..     |..+...  ...+  ...+++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~-~v~~~~r~~~~~~~~~~~~~~~~~~~-----D~~~~~~~~~~~~~~~~~~~i   76 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DH-IVYALGRNPEHLAALAEIEGVEPIES-----DIVKEVLEEGGVDKLKNLDHV   76 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHHTSTTEEEEEC-----CHHHHHHTSSSCGGGTTCSCC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHhhcCCcceec-----ccchHHHHHHHHHHHHhcCCC
Confidence            3678999998 9999988877655 77 68888898888777665332222221     2211100  0000  012479


Q ss_pred             cEEEEcCCC
Q 020768          256 DVSFDCAGF  264 (321)
Q Consensus       256 d~vid~~g~  264 (321)
                      |++|.+.|.
T Consensus        77 d~lv~~Ag~   85 (245)
T 3e9n_A           77 DTLVHAAAV   85 (245)
T ss_dssp             SEEEECC--
T ss_pred             CEEEECCCc
Confidence            999999985

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=96.38  E-value=0.01  Score=51.30  Aligned_cols=102  Identities=20%  Similarity=0.194  Sum_probs=61.5

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      .|+++||+|+ +++|...++.+...|+ .|++++++.++.+....+    ..+.. +..+..+.+.++.+. .+++|++|
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~----~~Dv~-~~~~~~~~~~~~~~~-~g~iD~lv   99 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGA-RVAVADRAVAGIAADLHL----PGDLR-EAAYADGLPGAVAAG-LGRLDIVV   99 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECSSCCTTSCCSEEC----CCCTT-SHHHHHHHHHHHHHH-HSCCCEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHhhhcc----CcCCC-CHHHHHHHHHHHHHh-cCCCCEEE
Confidence            4789999998 9999999999989999 688887766543211111    01111 112222223333222 35799999


Q ss_pred             EcCCCH----------H---------------HHHHHHHHcc--cCCEEEEEcCCCC
Q 020768          260 DCAGFN----------K---------------TMSTALSATR--AGGKVCLVGMGHL  289 (321)
Q Consensus       260 d~~g~~----------~---------------~~~~~~~~l~--~~G~~v~~g~~~~  289 (321)
                      ++.|..          +               ..+.++..++  .+|+++.+++...
T Consensus       100 nnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~  156 (266)
T 3uxy_A          100 NNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWG  156 (266)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBT
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHh
Confidence            998842          1               1233444443  3789999986543

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=96.38  E-value=0.018  Score=51.10  Aligned_cols=88  Identities=19%  Similarity=0.211  Sum_probs=65.0

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      .|.+|.|+|.|.+|...++.++.+|+ .|++.+++.++. .++++|+..    .    ++.+.+        ...|+|+.
T Consensus       141 ~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~g~~~----~----~l~ell--------~~aDvVvl  202 (313)
T 2ekl_A          141 AGKTIGIVGFGRIGTKVGIIANAMGM-KVLAYDILDIRE-KAEKINAKA----V----SLEELL--------KNSDVISL  202 (313)
T ss_dssp             TTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSCCHH-HHHHTTCEE----C----CHHHHH--------HHCSEEEE
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCcchh-HHHhcCcee----c----CHHHHH--------hhCCEEEE
Confidence            57799999999999999999999999 688888887664 466777642    1    222222        13699999


Q ss_pred             cCCCHH----HH-HHHHHHcccCCEEEEEcC
Q 020768          261 CAGFNK----TM-STALSATRAGGKVCLVGM  286 (321)
Q Consensus       261 ~~g~~~----~~-~~~~~~l~~~G~~v~~g~  286 (321)
                      ++....    .+ ...+..+++++.++.++.
T Consensus       203 ~~P~~~~t~~li~~~~l~~mk~ga~lIn~ar  233 (313)
T 2ekl_A          203 HVTVSKDAKPIIDYPQFELMKDNVIIVNTSR  233 (313)
T ss_dssp             CCCCCTTSCCSBCHHHHHHSCTTEEEEESSC
T ss_pred             eccCChHHHHhhCHHHHhcCCCCCEEEECCC
Confidence            987532    12 456788999998888875

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=96.38  E-value=0.026  Score=48.11  Aligned_cols=84  Identities=21%  Similarity=0.228  Sum_probs=49.5

Q ss_pred             CCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEe-CChhHH----HHHHHcCCCe-EEecCC-CcccHHHHHHHHHHH
Q 020768          179 IGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVD-VDDYRL----SVAKELGADN-IVKVST-NLQDIAEEVEKIQKA  250 (321)
Q Consensus       179 ~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~-~~~~~~----~~~~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~  250 (321)
                      ..+++++||+|+ +++|...+..+...|+ .|++++ ++.++.    +.+++.+... .+..+- +.++..+.+.++.+.
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGF-RVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAE   88 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTE-EEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHh
Confidence            356788999998 9999999999888999 466554 443322    2233445332 222221 222333444444333


Q ss_pred             hCCCccEEEEcCCC
Q 020768          251 MGTGIDVSFDCAGF  264 (321)
Q Consensus       251 ~~~~~d~vid~~g~  264 (321)
                       .+++|++|.+.|.
T Consensus        89 -~g~id~lv~~Ag~  101 (256)
T 3ezl_A           89 -VGEIDVLVNNAGI  101 (256)
T ss_dssp             -TCCEEEEEECCCC
T ss_pred             -cCCCCEEEECCCC
Confidence             4579999999884

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=96.36  E-value=0.015  Score=50.29  Aligned_cols=86  Identities=20%  Similarity=0.165  Sum_probs=51.5

Q ss_pred             CCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCe-EEecCC-CcccHHHHHHHHHHH
Q 020768          178 NIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVST-NLQDIAEEVEKIQKA  250 (321)
Q Consensus       178 ~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~  250 (321)
                      .+..+.++||+|+ |++|...++.+...|+++++...++.++.+.+    ++.+... .+..+- +..+..+.+.++.+.
T Consensus        22 ~m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  101 (272)
T 4e3z_A           22 SMSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQ  101 (272)
T ss_dssp             --CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            3456789999998 99999999999999995334446666654433    2333322 222221 122333334444332


Q ss_pred             hCCCccEEEEcCCC
Q 020768          251 MGTGIDVSFDCAGF  264 (321)
Q Consensus       251 ~~~~~d~vid~~g~  264 (321)
                       .+++|++|.++|.
T Consensus       102 -~g~id~li~nAg~  114 (272)
T 4e3z_A          102 -FGRLDGLVNNAGI  114 (272)
T ss_dssp             -HSCCCEEEECCCC
T ss_pred             -CCCCCEEEECCCC
Confidence             2479999999873

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=96.35  E-value=0.031  Score=48.42  Aligned_cols=82  Identities=24%  Similarity=0.322  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCC------------hhHHH----HHHHcCCCeE-EecCC-CcccHH
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD------------DYRLS----VAKELGADNI-VKVST-NLQDIA  241 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~------------~~~~~----~~~~~g~~~v-i~~~~-~~~~~~  241 (321)
                      .|+++||+|+ +++|...++.+...|+ .|++++++            .++.+    .+++.+.... +..+- +..+..
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   87 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGA-DIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALE   87 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            4789999998 9999999999999999 57777775            33222    2334454322 22221 222333


Q ss_pred             HHHHHHHHHhCCCccEEEEcCCC
Q 020768          242 EEVEKIQKAMGTGIDVSFDCAGF  264 (321)
Q Consensus       242 ~~~~~~~~~~~~~~d~vid~~g~  264 (321)
                      +.+.++.+. .+++|++|++.|-
T Consensus        88 ~~~~~~~~~-~g~id~lv~nAg~  109 (281)
T 3s55_A           88 SFVAEAEDT-LGGIDIAITNAGI  109 (281)
T ss_dssp             HHHHHHHHH-HTCCCEEEECCCC
T ss_pred             HHHHHHHHh-cCCCCEEEECCCC
Confidence            344444332 3479999999884

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=96.35  E-value=0.014  Score=50.57  Aligned_cols=79  Identities=25%  Similarity=0.366  Sum_probs=50.6

Q ss_pred             CCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCC-CcccHHHHHHHHHHHhCCCcc
Q 020768          179 IGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       179 ~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~-~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      -..|+++||+|+ +++|...++.+...|+ .|++++++.++..     +....+..+- +..+..+.+.++.+. .+++|
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~iD   83 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALVRYGA-KVVSVSLDEKSDV-----NVSDHFKIDVTNEEEVKEAVEKTTKK-YGRID   83 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCC--CT-----TSSEEEECCTTCHHHHHHHHHHHHHH-HSCCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhcc-----CceeEEEecCCCHHHHHHHHHHHHHH-cCCCC
Confidence            456889999998 9999999999989999 6888877765431     1222222222 223333344444333 35799


Q ss_pred             EEEEcCCC
Q 020768          257 VSFDCAGF  264 (321)
Q Consensus       257 ~vid~~g~  264 (321)
                      ++|++.|.
T Consensus        84 ~lv~nAg~   91 (269)
T 3vtz_A           84 ILVNNAGI   91 (269)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999984

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=96.34  E-value=0.017  Score=54.42  Aligned_cols=92  Identities=20%  Similarity=0.248  Sum_probs=69.7

Q ss_pred             CCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       179 ~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      .-.|.+|.|+|.|.+|..+++.++.+|+ +|++.+.+..+...+...|... .       +    +.++    -...|+|
T Consensus       274 ~L~GktVgIIG~G~IG~~vA~~l~~~G~-~V~v~d~~~~~~~~a~~~G~~~-~-------~----l~el----l~~aDiV  336 (494)
T 3d64_A          274 MIAGKIAVVAGYGDVGKGCAQSLRGLGA-TVWVTEIDPICALQAAMEGYRV-V-------T----MEYA----ADKADIF  336 (494)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSCHHHHHHHHTTTCEE-C-------C----HHHH----TTTCSEE
T ss_pred             ccCCCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCChHhHHHHHHcCCEe-C-------C----HHHH----HhcCCEE
Confidence            3578999999999999999999999999 7999998887754445556531 1       1    2222    2468999


Q ss_pred             EEcCCCHHHH-HHHHHHcccCCEEEEEcCC
Q 020768          259 FDCAGFNKTM-STALSATRAGGKVCLVGMG  287 (321)
Q Consensus       259 id~~g~~~~~-~~~~~~l~~~G~~v~~g~~  287 (321)
                      +.++++...+ ...+..++++..++.+|..
T Consensus       337 i~~~~t~~lI~~~~l~~MK~gAilINvgrg  366 (494)
T 3d64_A          337 VTATGNYHVINHDHMKAMRHNAIVCNIGHF  366 (494)
T ss_dssp             EECSSSSCSBCHHHHHHCCTTEEEEECSSS
T ss_pred             EECCCcccccCHHHHhhCCCCcEEEEcCCC
Confidence            9998765444 3677899999999999853

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=96.33  E-value=0.0014  Score=55.76  Aligned_cols=99  Identities=13%  Similarity=0.117  Sum_probs=64.8

Q ss_pred             CCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCC---eEEecCCCcccHHHHHHHHHHHhCCCc
Q 020768          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD---NIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (321)
Q Consensus       179 ~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~~~~~~~~~~~~~~  255 (321)
                      ..+|.+||-+|+|. |..+..+++..+. .+++++.+++-.+.+++....   .+....   .++.+....   .....|
T Consensus        58 ~~~G~rVLdiG~G~-G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~~~~~~~~~~---~~a~~~~~~---~~~~~F  129 (236)
T 3orh_A           58 SSKGGRVLEVGFGM-AIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLK---GLWEDVAPT---LPDGHF  129 (236)
T ss_dssp             TTTCEEEEEECCTT-SHHHHHHTTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEE---SCHHHHGGG---SCTTCE
T ss_pred             ccCCCeEEEECCCc-cHHHHHHHHhCCc-EEEEEeCCHHHHHHHHHHHhhCCCceEEEe---ehHHhhccc---ccccCC
Confidence            36899999999864 7778788876665 688999999998888864422   111111   122222111   124568


Q ss_pred             cEE-EEcCCC----------HHHHHHHHHHcccCCEEEEEc
Q 020768          256 DVS-FDCAGF----------NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       256 d~v-id~~g~----------~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      |.| +|+...          ...+..+.++|+|||+++.+.
T Consensus       130 D~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~  170 (236)
T 3orh_A          130 DGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  170 (236)
T ss_dssp             EEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             ceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence            877 454432          135677889999999998875

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=96.33  E-value=0.032  Score=48.84  Aligned_cols=81  Identities=20%  Similarity=0.235  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHc--------CCCe-EEecCC-CcccHHHHHHHHH
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL--------GADN-IVKVST-NLQDIAEEVEKIQ  248 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~--------g~~~-vi~~~~-~~~~~~~~~~~~~  248 (321)
                      .+.++||+|+ |++|...++.+...|+ .|++++++.++.+.+ +++        +... .+..+- +..+..+.+.++.
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   95 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   95 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHH
Confidence            4689999998 9999999999988998 688888887665433 222        3221 222221 1223333333333


Q ss_pred             HHhCCCccEEEEcCC
Q 020768          249 KAMGTGIDVSFDCAG  263 (321)
Q Consensus       249 ~~~~~~~d~vid~~g  263 (321)
                      +. .+++|++|.++|
T Consensus        96 ~~-~g~id~li~~Ag  109 (303)
T 1yxm_A           96 DT-FGKINFLVNNGG  109 (303)
T ss_dssp             HH-HSCCCEEEECCC
T ss_pred             HH-cCCCCEEEECCC
Confidence            32 247999999998

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=96.32  E-value=0.039  Score=50.08  Aligned_cols=106  Identities=17%  Similarity=0.157  Sum_probs=70.3

Q ss_pred             HHHHHHcCC-CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC----hhH---------HHHHHHcCCCeEEecCCC
Q 020768          171 LHACRRANI-GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD----DYR---------LSVAKELGADNIVKVSTN  236 (321)
Q Consensus       171 ~~~l~~~~~-~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~----~~~---------~~~~~~~g~~~vi~~~~~  236 (321)
                      +.+++..+. -.+.+|+|.|+|..|..+++++..+|.+++++++++    .+|         .+++++....      ..
T Consensus       180 ~~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~------~~  253 (388)
T 1vl6_A          180 LNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPE------RL  253 (388)
T ss_dssp             HHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTT------CC
T ss_pred             HHHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhcc------Cc
Confidence            344444332 256799999999999999999999999889999987    544         4555554321      11


Q ss_pred             cccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC
Q 020768          237 LQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE  290 (321)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~  290 (321)
                      ..++.+.+        .++|++|-+++..-.-+..++.++++-.++.++.+.++
T Consensus       254 ~~~L~eav--------~~ADVlIG~Sap~l~t~emVk~Ma~~pIIfalSNPt~E  299 (388)
T 1vl6_A          254 SGDLETAL--------EGADFFIGVSRGNILKPEWIKKMSRKPVIFALANPVPE  299 (388)
T ss_dssp             CSCHHHHH--------TTCSEEEECSCSSCSCHHHHTTSCSSCEEEECCSSSCS
T ss_pred             hhhHHHHH--------ccCCEEEEeCCCCccCHHHHHhcCCCCEEEEcCCCCCC
Confidence            22333332        34799999988432334667778887766666655543

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=96.32  E-value=0.027  Score=48.11  Aligned_cols=81  Identities=17%  Similarity=0.234  Sum_probs=50.6

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhH--HH-HHHHc---CCCe-EEecCC-CcccHHHHHHHHHHHhC
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYR--LS-VAKEL---GADN-IVKVST-NLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~--~~-~~~~~---g~~~-vi~~~~-~~~~~~~~~~~~~~~~~  252 (321)
                      ++++||+|+ |++|...++.+...|+ .|++++++.++  .+ ..+++   +... .+..+- +..+..+.+.++.+. .
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~   79 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGF-DIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEK-L   79 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-h
Confidence            578999998 9999999998888899 67777777665  33 22332   4322 222221 122333334443332 2


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      +++|++|++.|.
T Consensus        80 g~iD~lv~nAg~   91 (258)
T 3a28_C           80 GGFDVLVNNAGI   91 (258)
T ss_dssp             TCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999884

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.32  E-value=0.046  Score=45.92  Aligned_cols=112  Identities=12%  Similarity=0.086  Sum_probs=63.4

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh-hHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-YRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      .|.+|||+|+|.+|...++.+...|+. |.+++... +..+.+.+.+--..+.-.....            .-.++|+||
T Consensus        30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~-VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~------------dL~~adLVI   96 (223)
T 3dfz_A           30 KGRSVLVVGGGTIATRRIKGFLQEGAA-ITVVAPTVSAEINEWEAKGQLRVKRKKVGEE------------DLLNVFFIV   96 (223)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHGGGCCC-EEEECSSCCHHHHHHHHTTSCEEECSCCCGG------------GSSSCSEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCE-EEEECCCCCHHHHHHHHcCCcEEEECCCCHh------------HhCCCCEEE
Confidence            478999999999999999999999995 66665443 2333332323222222111111            125699999


Q ss_pred             EcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhcc-ceEEE
Q 020768          260 DCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAAR-YLIYS  306 (321)
Q Consensus       260 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k-~~~i~  306 (321)
                      -+++.+..-..+....+ .|.++.+........+-+-..+.+ .++|-
T Consensus        97 aAT~d~~~N~~I~~~ak-~gi~VNvvD~p~~~~f~~Paiv~rg~l~ia  143 (223)
T 3dfz_A           97 VATNDQAVNKFVKQHIK-NDQLVNMASSFSDGNIQIPAQFSRGRLSLA  143 (223)
T ss_dssp             ECCCCTHHHHHHHHHSC-TTCEEEC-----CCSEECCEEEEETTEEEE
T ss_pred             ECCCCHHHHHHHHHHHh-CCCEEEEeCCcccCeEEEeeEEEeCCEEEE
Confidence            99998655445555544 888877764433333333333333 34443

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=96.30  E-value=0.037  Score=49.12  Aligned_cols=108  Identities=15%  Similarity=0.099  Sum_probs=64.6

Q ss_pred             HHHHHcCCC-CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC---hhHHHH-HHHc----CCC-eEEecCCCcccHH
Q 020768          172 HACRRANIG-PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD---DYRLSV-AKEL----GAD-NIVKVSTNLQDIA  241 (321)
Q Consensus       172 ~~l~~~~~~-~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~---~~~~~~-~~~~----g~~-~vi~~~~~~~~~~  241 (321)
                      .+++...+. .|.++||+|+|++|.+++..+...|++.|.++.++   .+|.+. ++++    +.. .++.+++    . 
T Consensus       143 ~~L~~~~~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~----~-  217 (315)
T 3tnl_A          143 RALKEAGHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIED----H-  217 (315)
T ss_dssp             HHHHHTTCCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTC----H-
T ss_pred             HHHHHcCCCccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccch----H-
Confidence            345443333 57899999999999999999999999778888888   555443 2333    221 2233321    1 


Q ss_pred             HHHHHHHHHhCCCccEEEEcCCCHHH-----HHH-HHHHcccCCEEEEEcCCC
Q 020768          242 EEVEKIQKAMGTGIDVSFDCAGFNKT-----MST-ALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       242 ~~~~~~~~~~~~~~d~vid~~g~~~~-----~~~-~~~~l~~~G~~v~~g~~~  288 (321)
                      +.+.+..    ..+|+||+|++-.-.     ... ....++++..++.+-+..
T Consensus       218 ~~l~~~l----~~aDiIINaTp~Gm~~~~~~~p~~~~~~l~~~~~V~DlvY~P  266 (315)
T 3tnl_A          218 EQLRKEI----AESVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVVYKP  266 (315)
T ss_dssp             HHHHHHH----HTCSEEEECSSTTSTTSTTCCSCCCGGGCCTTCEEEESCCSS
T ss_pred             HHHHhhh----cCCCEEEECccCCCCCCCCCCCCCcHHHcCCCCEEEEeccCC
Confidence            1122211    358999999874210     001 234566766666666543

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=96.30  E-value=0.023  Score=49.00  Aligned_cols=82  Identities=23%  Similarity=0.302  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeC-ChhHHHH----HHHcCCCe-EEecCCC-cccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV-DDYRLSV----AKELGADN-IVKVSTN-LQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~-~~~~~~~----~~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~  252 (321)
                      .++++||+|+ +++|...++.+...|+ .|+++++ +.++.+.    +++.+... ++..+-. ..+..+.+.++.+. .
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~  105 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGL-KVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQS-D  105 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh-c
Confidence            5789999998 9999999998889999 5777766 4443332    33444332 2222222 22333344444332 3


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      +++|++|.+.|.
T Consensus       106 g~id~li~nAg~  117 (271)
T 4iin_A          106 GGLSYLVNNAGV  117 (271)
T ss_dssp             SSCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            579999999884

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=96.30  E-value=0.014  Score=49.73  Aligned_cols=94  Identities=24%  Similarity=0.326  Sum_probs=58.4

Q ss_pred             CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 020768          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  261 (321)
                      +++||+|+ |++|..+++.+...|+ .|+++++++++.+.      .    +..+-.+ .+.+.++.+...+++|++|++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~------~----~~~Dl~~-~~~v~~~~~~~~~~id~lv~~   69 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDAEVIA------D----LSTAEGR-KQAIADVLAKCSKGMDGLVLC   69 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSEEC------C----TTSHHHH-HHHHHHHHTTCTTCCSEEEEC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhhcc------c----cccCCCC-HHHHHHHHHHhCCCCCEEEEC
Confidence            47899998 9999999999988999 67777777654221      1    1111111 123333332212578999999


Q ss_pred             CCCHH------------------HHHHHHHHcccC--CEEEEEcCCC
Q 020768          262 AGFNK------------------TMSTALSATRAG--GKVCLVGMGH  288 (321)
Q Consensus       262 ~g~~~------------------~~~~~~~~l~~~--G~~v~~g~~~  288 (321)
                      .|...                  ..+.++..+...  |+++.+++..
T Consensus        70 Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~  116 (257)
T 1fjh_A           70 AGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVA  116 (257)
T ss_dssp             CCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGG
T ss_pred             CCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChh
Confidence            88532                  134455555433  8999998643

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=96.29  E-value=0.024  Score=48.58  Aligned_cols=81  Identities=20%  Similarity=0.187  Sum_probs=49.6

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEE-eCChhHHHHHHHc----CCC-eEEecCC-CcccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIV-DVDDYRLSVAKEL----GAD-NIVKVST-NLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v-~~~~~~~~~~~~~----g~~-~vi~~~~-~~~~~~~~~~~~~~~~~  252 (321)
                      .++++||+|+ +++|...++.+...|+ .|+++ .++++..+.+++.    +.. ..+..+- +.++..+.+.++.+. .
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~   83 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGY-SVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSH-F   83 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHH-H
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH-h
Confidence            3578999998 9999999999989999 56665 4444444444332    221 1222221 223334444444333 2


Q ss_pred             CCccEEEEcCC
Q 020768          253 TGIDVSFDCAG  263 (321)
Q Consensus       253 ~~~d~vid~~g  263 (321)
                      +++|++|.++|
T Consensus        84 g~id~lv~~Ag   94 (264)
T 3i4f_A           84 GKIDFLINNAG   94 (264)
T ss_dssp             SCCCEEECCCC
T ss_pred             CCCCEEEECCc
Confidence            47999999999

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.28  E-value=0.018  Score=50.76  Aligned_cols=95  Identities=16%  Similarity=0.143  Sum_probs=65.1

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHH-HHHHcCCC--eEEecCCCcccHHHHHHHHHHHhCCCccE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGAD--NIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~-~~~~~g~~--~vi~~~~~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      .+.+++|+|+|++|..++..+...|+..|.+++++.+|.+ ++++++..  .+++       + +.+.+.    -..+|+
T Consensus       140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~-------~-~~~~~~----~~~aDi  207 (297)
T 2egg_A          140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFS-------L-AEAETR----LAEYDI  207 (297)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEEC-------H-HHHHHT----GGGCSE
T ss_pred             CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceee-------H-HHHHhh----hccCCE
Confidence            5789999999999999999999999877888989887754 55666652  2221       1 112221    246899


Q ss_pred             EEEcCCCHHH-----HHHHHHHcccCCEEEEEcCC
Q 020768          258 SFDCAGFNKT-----MSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       258 vid~~g~~~~-----~~~~~~~l~~~G~~v~~g~~  287 (321)
                      ||+|++....     .......++++..++.+...
T Consensus       208 vIn~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~y~  242 (297)
T 2egg_A          208 IINTTSVGMHPRVEVQPLSLERLRPGVIVSDIIYN  242 (297)
T ss_dssp             EEECSCTTCSSCCSCCSSCCTTCCTTCEEEECCCS
T ss_pred             EEECCCCCCCCCCCCCCCCHHHcCCCCEEEEcCCC
Confidence            9999986421     00112456777788888764

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=96.28  E-value=0.036  Score=48.07  Aligned_cols=83  Identities=18%  Similarity=0.214  Sum_probs=52.5

Q ss_pred             CCCCEEEEEcC-Ch--hHHHHHHHHHHcCCCeEEEEeCCh--hHHHHHH-HcCCCeEEecCCCc-ccHHHHHHHHHHHhC
Q 020768          180 GPETNVLIMGA-GP--IGLVTMLGARAFGAPRIVIVDVDD--YRLSVAK-ELGADNIVKVSTNL-QDIAEEVEKIQKAMG  252 (321)
Q Consensus       180 ~~g~~vlI~Ga-g~--vG~~a~qla~~~g~~~vv~v~~~~--~~~~~~~-~~g~~~vi~~~~~~-~~~~~~~~~~~~~~~  252 (321)
                      -.++++||+|+ |.  +|...++.+...|+ .|++++++.  ++.+.+. +.+-...+..+-.+ ++..+.+.++.+. .
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~  101 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHREGA-ELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKV-W  101 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHTTC-EEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHH-C
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHcCC-EEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHH-c
Confidence            35789999986 54  99999988888999 677777776  4444443 34433333333222 2333334444332 4


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      +.+|++|.++|.
T Consensus       102 g~id~li~nAg~  113 (280)
T 3nrc_A          102 DGLDAIVHSIAF  113 (280)
T ss_dssp             SSCCEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            579999999874

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=96.27  E-value=0.042  Score=48.18  Aligned_cols=82  Identities=21%  Similarity=0.243  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCC------------hhHHH----HHHHcCCCeE-EecCC-CcccHH
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD------------DYRLS----VAKELGADNI-VKVST-NLQDIA  241 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~------------~~~~~----~~~~~g~~~v-i~~~~-~~~~~~  241 (321)
                      .|+++||+|+ +++|...++.+...|+ .|++++++            .++.+    .+++.+.... +..+- +..+..
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  105 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ  105 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            4789999998 9999999999999999 67777665            33332    2334454322 22221 222333


Q ss_pred             HHHHHHHHHhCCCccEEEEcCCC
Q 020768          242 EEVEKIQKAMGTGIDVSFDCAGF  264 (321)
Q Consensus       242 ~~~~~~~~~~~~~~d~vid~~g~  264 (321)
                      +.+.++.+. .+++|++|++.|.
T Consensus       106 ~~~~~~~~~-~g~iD~lv~nAg~  127 (299)
T 3t7c_A          106 AAVDDGVTQ-LGRLDIVLANAAL  127 (299)
T ss_dssp             HHHHHHHHH-HSCCCEEEECCCC
T ss_pred             HHHHHHHHH-hCCCCEEEECCCC
Confidence            334443332 3579999999883

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=96.27  E-value=0.0096  Score=48.65  Aligned_cols=96  Identities=24%  Similarity=0.281  Sum_probs=59.0

Q ss_pred             CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 020768          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  261 (321)
                      .+|||+|+ |.+|...++.+...|. .|+++++++++.+.....+. .++..+-  .+. +.+.+..    .++|+||.+
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~-~~~~~D~--~~~-~~~~~~~----~~~d~vi~~   74 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPA-HVVVGDV--LQA-ADVDKTV----AGQDAVIVL   74 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCS-EEEESCT--TSH-HHHHHHH----TTCSEEEEC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeChhhcccccCCce-EEEEecC--CCH-HHHHHHH----cCCCEEEEC
Confidence            68999999 9999999999988998 68888888765432111122 2222221  122 2333332    358999999


Q ss_pred             CCCHH----------HHHHHHHHccc--CCEEEEEcCC
Q 020768          262 AGFNK----------TMSTALSATRA--GGKVCLVGMG  287 (321)
Q Consensus       262 ~g~~~----------~~~~~~~~l~~--~G~~v~~g~~  287 (321)
                      .|...          ....+++.+..  -++++.++..
T Consensus        75 a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~  112 (206)
T 1hdo_A           75 LGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSA  112 (206)
T ss_dssp             CCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred             ccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeee
Confidence            88532          23344444433  3588888754

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=96.25  E-value=0.031  Score=47.28  Aligned_cols=81  Identities=20%  Similarity=0.238  Sum_probs=51.5

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHc----CCC-eEEecCC-CcccHHHHHHHHHHHhCC
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL----GAD-NIVKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~----g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      +.++||+|+ |++|...+..+...|+ .|++++++.++.+.+ +++    +.. ..+..+- +..+..+.+.++.+. .+
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   79 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGD-RVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQ-FG   79 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH-hC
Confidence            578999998 9999999998888998 688888887765543 233    221 1222221 122333333433332 24


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|.+.|.
T Consensus        80 ~id~li~~Ag~   90 (250)
T 2cfc_A           80 AIDVLVNNAGI   90 (250)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=96.25  E-value=0.033  Score=46.97  Aligned_cols=82  Identities=22%  Similarity=0.221  Sum_probs=51.3

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCC------eEEEEeCChhHHHHHH-Hc---CCC-eEEecCCC-cccHHHHHHHHH
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAP------RIVIVDVDDYRLSVAK-EL---GAD-NIVKVSTN-LQDIAEEVEKIQ  248 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~------~vv~v~~~~~~~~~~~-~~---g~~-~vi~~~~~-~~~~~~~~~~~~  248 (321)
                      +.++||+|+ |++|...++.+...|+.      .|++++++.++.+.+. ++   +.. ..+..+-. ..+..+.+.++.
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            567999998 99999998888888874      5778888877655432 22   322 12222211 223333334433


Q ss_pred             HHhCCCccEEEEcCCC
Q 020768          249 KAMGTGIDVSFDCAGF  264 (321)
Q Consensus       249 ~~~~~~~d~vid~~g~  264 (321)
                      +. .+++|++|.+.|.
T Consensus        82 ~~-~g~id~li~~Ag~   96 (244)
T 2bd0_A           82 ER-YGHIDCLVNNAGV   96 (244)
T ss_dssp             HH-TSCCSEEEECCCC
T ss_pred             Hh-CCCCCEEEEcCCc
Confidence            32 3579999999873

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.24  E-value=0.027  Score=48.73  Aligned_cols=88  Identities=16%  Similarity=0.219  Sum_probs=62.2

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  261 (321)
                      +.+++|+|+|++|.+++..+...| ..+.++.++.+|.+.+.+++.. ...+++           +     ..+|+||+|
T Consensus       118 ~k~vlvlGaGGaaraia~~L~~~G-~~v~V~nRt~~ka~~la~~~~~-~~~~~~-----------l-----~~~DiVIna  179 (269)
T 3phh_A          118 YQNALILGAGGSAKALACELKKQG-LQVSVLNRSSRGLDFFQRLGCD-CFMEPP-----------K-----SAFDLIINA  179 (269)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSCTTHHHHHHHTCE-EESSCC-----------S-----SCCSEEEEC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHCCCe-EecHHH-----------h-----ccCCEEEEc
Confidence            889999999999999999999999 5788888888876544477743 222211           0     168999998


Q ss_pred             CCCHH----HH--HHHHHHcccCCEEEEEcCC
Q 020768          262 AGFNK----TM--STALSATRAGGKVCLVGMG  287 (321)
Q Consensus       262 ~g~~~----~~--~~~~~~l~~~G~~v~~g~~  287 (321)
                      ++...    .+  ..+...++++..++.+.+.
T Consensus       180 Tp~Gm~~~~~l~~~~l~~~l~~~~~v~D~vY~  211 (269)
T 3phh_A          180 TSASLHNELPLNKEVLKGYFKEGKLAYDLAYG  211 (269)
T ss_dssp             CTTCCCCSCSSCHHHHHHHHHHCSEEEESCCS
T ss_pred             ccCCCCCCCCCChHHHHhhCCCCCEEEEeCCC
Confidence            77531    11  2223367788888887754

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.22  E-value=0.053  Score=47.84  Aligned_cols=90  Identities=12%  Similarity=0.054  Sum_probs=64.1

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  261 (321)
                      -.+|.|+|+|.+|...++.+...|. .|.+.++++++.+.+.+.|+...       .+..+.+.        ..|+||-|
T Consensus        21 m~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~-------~~~~~~~~--------~aDvvi~~   84 (310)
T 3doj_A           21 MMEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRTLSKCDELVEHGASVC-------ESPAEVIK--------KCKYTIAM   84 (310)
T ss_dssp             SCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEEC-------SSHHHHHH--------HCSEEEEC
T ss_pred             CCEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCeEc-------CCHHHHHH--------hCCEEEEE
Confidence            3589999999999999999988998 78889999999888888775321       12222221        36899999


Q ss_pred             CCCHHHHHHHH-------HHcccCCEEEEEcCC
Q 020768          262 AGFNKTMSTAL-------SATRAGGKVCLVGMG  287 (321)
Q Consensus       262 ~g~~~~~~~~~-------~~l~~~G~~v~~g~~  287 (321)
                      ++.+..+...+       ..++++..++..+..
T Consensus        85 vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~  117 (310)
T 3doj_A           85 LSDPCAALSVVFDKGGVLEQICEGKGYIDMSTV  117 (310)
T ss_dssp             CSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCC
T ss_pred             cCCHHHHHHHHhCchhhhhccCCCCEEEECCCC
Confidence            98765555544       345666666666543

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=96.20  E-value=0.012  Score=50.44  Aligned_cols=79  Identities=19%  Similarity=0.367  Sum_probs=49.3

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCe-EEecCCC-cccHHHHHHHHHHHhCCCccE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN-IVKVSTN-LQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      .++++||+|+ +++|...++.+...|+ .|++++++.+  +..++++... .+..+-. .++..+.+....+  .+++|+
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~--~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~--~g~id~   82 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGA-QVVVLDIRGE--DVVADLGDRARFAAADVTDEAAVASALDLAET--MGTLRI   82 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCH--HHHHHTCTTEEEEECCTTCHHHHHHHHHHHHH--HSCEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCchH--HHHHhcCCceEEEECCCCCHHHHHHHHHHHHH--hCCCCE
Confidence            3678999998 9999999998888999 6777777543  3344555432 2222222 2233333333322  357999


Q ss_pred             EEEcCCC
Q 020768          258 SFDCAGF  264 (321)
Q Consensus       258 vid~~g~  264 (321)
                      +|++.|.
T Consensus        83 lv~nAg~   89 (257)
T 3tl3_A           83 VVNCAGT   89 (257)
T ss_dssp             EEECGGG
T ss_pred             EEECCCC
Confidence            9999983

>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38

Probab=96.20  E-value=0.041  Score=48.78  Aligned_cols=102  Identities=25%  Similarity=0.303  Sum_probs=67.2

Q ss_pred             HHcCCCCCCEEEEEcCChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHH
Q 020768          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      ....+++|++||=.|+|. |..++++++.++ ...|++++.++++.+.+++    +|...+.....+..++..       
T Consensus       112 ~~l~~~~g~~VLDlg~G~-G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~-------  183 (315)
T 1ixk_A          112 VALDPKPGEIVADMAAAP-GGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGE-------  183 (315)
T ss_dssp             HHHCCCTTCEEEECCSSC-SHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGG-------
T ss_pred             HHhCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhccc-------
Confidence            445778999998888754 556667777653 2479999999998887654    466443322222222110       


Q ss_pred             HhCCCccEEEE---cCCC-------------------------HHHHHHHHHHcccCCEEEEEc
Q 020768          250 AMGTGIDVSFD---CAGF-------------------------NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       250 ~~~~~~d~vid---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~g  285 (321)
                       ....||.|+-   |+|.                         ...+..+.+.|++||+++...
T Consensus       184 -~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~st  246 (315)
T 1ixk_A          184 -LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYST  246 (315)
T ss_dssp             -GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             -ccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEe
Confidence             1456999885   3332                         256788999999999998765

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=96.20  E-value=0.03  Score=50.16  Aligned_cols=87  Identities=17%  Similarity=0.242  Sum_probs=64.1

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      .|.+|.|+|.|.+|...++.++.+|. .|++.+++.++ +.+.++|+..        .++.+.+.        ..|+|+.
T Consensus       149 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~--------~~l~~~l~--------~aDvVil  210 (334)
T 2dbq_A          149 YGKTIGIIGLGRIGQAIAKRAKGFNM-RILYYSRTRKE-EVERELNAEF--------KPLEDLLR--------ESDFVVL  210 (334)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHHCCEE--------CCHHHHHH--------HCSEEEE
T ss_pred             CCCEEEEEccCHHHHHHHHHHHhCCC-EEEEECCCcch-hhHhhcCccc--------CCHHHHHh--------hCCEEEE
Confidence            46789999999999999999999998 68888888777 5666667521        12222221        3699999


Q ss_pred             cCCCHH----HH-HHHHHHcccCCEEEEEc
Q 020768          261 CAGFNK----TM-STALSATRAGGKVCLVG  285 (321)
Q Consensus       261 ~~g~~~----~~-~~~~~~l~~~G~~v~~g  285 (321)
                      ++....    .+ ...+..++++..++.++
T Consensus       211 ~vp~~~~t~~~i~~~~~~~mk~~ailIn~s  240 (334)
T 2dbq_A          211 AVPLTRETYHLINEERLKLMKKTAILINIA  240 (334)
T ss_dssp             CCCCCTTTTTCBCHHHHHHSCTTCEEEECS
T ss_pred             CCCCChHHHHhhCHHHHhcCCCCcEEEECC
Confidence            987643    12 35677889998888877

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=96.19  E-value=0.024  Score=49.98  Aligned_cols=101  Identities=18%  Similarity=0.312  Sum_probs=68.7

Q ss_pred             HHcC-CCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCC-eEEecCCCcccHHHHHHHHH
Q 020768          175 RRAN-IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGAD-NIVKVSTNLQDIAEEVEKIQ  248 (321)
Q Consensus       175 ~~~~-~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~-~vi~~~~~~~~~~~~~~~~~  248 (321)
                      +... ++++++||-+|+|. |..+..+++..+. .+++++.+++..+.+++    .|.. .+-....+..++.       
T Consensus       110 ~~l~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-------  180 (312)
T 3vc1_A          110 DHLGQAGPDDTLVDAGCGR-GGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTP-------  180 (312)
T ss_dssp             TTSCCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-------
T ss_pred             HHhccCCCCCEEEEecCCC-CHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCC-------
Confidence            3444 78999999999865 7778888887777 79999999988877664    4433 1111111111110       


Q ss_pred             HHhCCCccEEEEc-----CCCHHHHHHHHHHcccCCEEEEEc
Q 020768          249 KAMGTGIDVSFDC-----AGFNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       249 ~~~~~~~d~vid~-----~g~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                       .....+|+|+..     ..-...+..+.+.|++||++++..
T Consensus       181 -~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~  221 (312)
T 3vc1_A          181 -FDKGAVTASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTIT  221 (312)
T ss_dssp             -CCTTCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             -CCCCCEeEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEE
Confidence             013579999863     222567889999999999999876

>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}

Probab=96.18  E-value=0.027  Score=50.92  Aligned_cols=89  Identities=17%  Similarity=0.152  Sum_probs=63.6

Q ss_pred             CEEEEEcCChhHHHHHHHHHHc-CCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 020768          183 TNVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~-g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  261 (321)
                      -+|.|+|+|.+|...+..++.. +++.+.+++.++++.+.++++|+..   +    .++.+.+    .  ...+|+|+.|
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~---~----~~~~~ll----~--~~~~D~V~i~   72 (359)
T 3e18_A            6 YQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKI---Y----ESYEAVL----A--DEKVDAVLIA   72 (359)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCB---C----SCHHHHH----H--CTTCCEEEEC
T ss_pred             CcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCce---e----CCHHHHh----c--CCCCCEEEEc
Confidence            3789999999998888877766 6644455688888888777777642   2    2333222    1  3579999999


Q ss_pred             CCCHHHHHHHHHHcccCCEEEEEc
Q 020768          262 AGFNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       262 ~g~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      +....+.+.+..+|..|-. +++-
T Consensus        73 tp~~~h~~~~~~al~aGkh-Vl~E   95 (359)
T 3e18_A           73 TPNDSHKELAISALEAGKH-VVCE   95 (359)
T ss_dssp             SCGGGHHHHHHHHHHTTCE-EEEE
T ss_pred             CCcHHHHHHHHHHHHCCCC-EEee
Confidence            9998888888888886644 4454

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=96.17  E-value=0.021  Score=48.17  Aligned_cols=104  Identities=18%  Similarity=0.220  Sum_probs=69.1

Q ss_pred             CCCCCEEEEEcCChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHhC-
Q 020768          179 IGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAMG-  252 (321)
Q Consensus       179 ~~~g~~vlI~Gag~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~~~~-  252 (321)
                      ..++++||-+|+| .|..++.+++.++ ...+++++.+++..+.+++    .|....+.+..  .+..+.+.++.. .+ 
T Consensus        70 ~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~--~d~~~~l~~l~~-~~~  145 (232)
T 3cbg_A           70 LTGAKQVLEIGVF-RGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRL--GPALATLEQLTQ-GKP  145 (232)
T ss_dssp             HHTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEE--SCHHHHHHHHHT-SSS
T ss_pred             hcCCCEEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--cCHHHHHHHHHh-cCC
Confidence            4567899999987 6888899998864 2379999999988877764    35432122111  233333333321 12 


Q ss_pred             -CCccEEEEcCCC---HHHHHHHHHHcccCCEEEEEcC
Q 020768          253 -TGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       253 -~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                       ..||+||-....   ...++.+.+.|+++|.++.-..
T Consensus       146 ~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~~  183 (232)
T 3cbg_A          146 LPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDNV  183 (232)
T ss_dssp             CCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEECT
T ss_pred             CCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeCC
Confidence             579999954332   3468888999999999988653

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=96.17  E-value=0.023  Score=48.28  Aligned_cols=82  Identities=23%  Similarity=0.227  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCC-hhHHHHH-HH---cCCCe-EEecCC-CcccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD-DYRLSVA-KE---LGADN-IVKVST-NLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~-~~~~~~~-~~---~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~  252 (321)
                      .+.++||+|+ |++|...+..+...|+ .|++++++ .++.+.+ ++   .+... .+..+- +.++..+.+.++.+. .
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   83 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGA-KVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAK-F   83 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH-c
Confidence            4678999998 9999999999888999 57777776 5544332 22   24221 222221 122333334433332 2


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      +++|++|.++|.
T Consensus        84 g~id~vi~~Ag~   95 (258)
T 3afn_B           84 GGIDVLINNAGG   95 (258)
T ss_dssp             SSCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999884

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=96.16  E-value=0.063  Score=47.73  Aligned_cols=80  Identities=20%  Similarity=0.273  Sum_probs=50.1

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCC-----hhHHHHH----HHcCCCe-EEecCC-CcccHHHHHHHHHH
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD-----DYRLSVA----KELGADN-IVKVST-NLQDIAEEVEKIQK  249 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~-----~~~~~~~----~~~g~~~-vi~~~~-~~~~~~~~~~~~~~  249 (321)
                      ++++||+|+ |++|...++.+...|+ +|+++.++     .++.+.+    ++.+... .+..+- +..+..+.+.++.+
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~G~-~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~   83 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGAGH-RVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIG   83 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            578999998 9999999999999999 57766554     3333322    2334332 222221 22334444444433


Q ss_pred             HhCCCccEEEEcCC
Q 020768          250 AMGTGIDVSFDCAG  263 (321)
Q Consensus       250 ~~~~~~d~vid~~g  263 (321)
                      . .+++|++|++.|
T Consensus        84 ~-~g~iD~lVnnAG   96 (324)
T 3u9l_A           84 E-DGRIDVLIHNAG   96 (324)
T ss_dssp             H-HSCCSEEEECCC
T ss_pred             H-cCCCCEEEECCC
Confidence            3 357999999998

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.15  E-value=0.063  Score=47.61  Aligned_cols=90  Identities=14%  Similarity=0.164  Sum_probs=64.9

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  261 (321)
                      ..+|.|+|+|.+|...++.+...|. .|.+.++++++.+.+.+.|+...       .+..+.+        ...|+||.|
T Consensus        31 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~-------~~~~e~~--------~~aDvVi~~   94 (320)
T 4dll_A           31 ARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRTPARAASLAALGATIH-------EQARAAA--------RDADIVVSM   94 (320)
T ss_dssp             CSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCEEE-------SSHHHHH--------TTCSEEEEC
T ss_pred             CCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHCCCEee-------CCHHHHH--------hcCCEEEEE
Confidence            4589999999999999998888998 68889999999888877775321       1222111        357999999


Q ss_pred             CCCHHHHHHHH------HHcccCCEEEEEcCC
Q 020768          262 AGFNKTMSTAL------SATRAGGKVCLVGMG  287 (321)
Q Consensus       262 ~g~~~~~~~~~------~~l~~~G~~v~~g~~  287 (321)
                      +..+..+...+      ..++++..++..+..
T Consensus        95 vp~~~~~~~v~~~~~~~~~l~~~~~vi~~st~  126 (320)
T 4dll_A           95 LENGAVVQDVLFAQGVAAAMKPGSLFLDMASI  126 (320)
T ss_dssp             CSSHHHHHHHHTTTCHHHHCCTTCEEEECSCC
T ss_pred             CCCHHHHHHHHcchhHHhhCCCCCEEEecCCC
Confidence            99765555444      356777777776644

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=96.15  E-value=0.061  Score=45.79  Aligned_cols=105  Identities=14%  Similarity=0.165  Sum_probs=67.7

Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHh-
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAM-  251 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~~~-  251 (321)
                      ...++++||-+|+| .|..++.+++.+. ...+++++.+++..+.+++    .|...-+.+..  .+..+.+..+...+ 
T Consensus        76 ~~~~~~~VLeiG~G-~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~--gda~~~l~~l~~~~~  152 (247)
T 1sui_A           76 KLINAKNTMEIGVY-TGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFRE--GPALPVLDEMIKDEK  152 (247)
T ss_dssp             HHTTCCEEEEECCG-GGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEE--SCHHHHHHHHHHSGG
T ss_pred             HhhCcCEEEEeCCC-cCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEE--CCHHHHHHHHHhccC
Confidence            34567899999875 3778888888863 2379999999988877764    45432111111  23333333332111 


Q ss_pred             -CCCccEEEEcCCC---HHHHHHHHHHcccCCEEEEEc
Q 020768          252 -GTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       252 -~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  285 (321)
                       ...||+||-....   ...+..+.+.|++||.++.-.
T Consensus       153 ~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~  190 (247)
T 1sui_A          153 NHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDN  190 (247)
T ss_dssp             GTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred             CCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEec
Confidence             3579999864432   356788999999999998754

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=96.14  E-value=0.042  Score=46.58  Aligned_cols=101  Identities=22%  Similarity=0.264  Sum_probs=69.2

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCC-eEEecCCCcccHHHHHHHHH
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGAD-NIVKVSTNLQDIAEEVEKIQ  248 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~-~vi~~~~~~~~~~~~~~~~~  248 (321)
                      ++...++++.+||-+|+|. |..+..+++..+. .+++++.+++..+.+++    .|.. .+-....+..++       .
T Consensus        29 ~~~~~~~~~~~VLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~-------~   99 (256)
T 1nkv_A           29 GRVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY-------V   99 (256)
T ss_dssp             HHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTC-------C
T ss_pred             HHhcCCCCCCEEEEECCCC-CHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhC-------C
Confidence            4567789999999999866 7788889988887 79999999988777654    3432 121111111111       0


Q ss_pred             HHhCCCccEEEEc-----C-CCHHHHHHHHHHcccCCEEEEEc
Q 020768          249 KAMGTGIDVSFDC-----A-GFNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       249 ~~~~~~~d~vid~-----~-g~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                        ....+|+|+..     . .-...+..+.+.|++||++++..
T Consensus       100 --~~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~  140 (256)
T 1nkv_A          100 --ANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  140 (256)
T ss_dssp             --CSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             --cCCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence              13569999962     1 22456888899999999998864

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=96.13  E-value=0.027  Score=48.41  Aligned_cols=83  Identities=18%  Similarity=0.068  Sum_probs=50.0

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH----HHHcCCCe-EEecCCC-cccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~----~~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~  253 (321)
                      .++++||+|+ +++|...++.+...|++.++...++.++.+.    +++.+... ++..+-. .++..+.+.++.+. .+
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~g  103 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQ-HG  103 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-HC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH-hC
Confidence            3678999998 9999999999999999543445555544332    22333322 2222222 22333334443332 35


Q ss_pred             CccEEEEcCCC
Q 020768          254 GIDVSFDCAGF  264 (321)
Q Consensus       254 ~~d~vid~~g~  264 (321)
                      ++|++|.+.|.
T Consensus       104 ~id~li~nAg~  114 (267)
T 4iiu_A          104 AWYGVVSNAGI  114 (267)
T ss_dssp             CCSEEEECCCC
T ss_pred             CccEEEECCCC
Confidence            79999999874

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=96.10  E-value=0.028  Score=49.93  Aligned_cols=79  Identities=20%  Similarity=0.268  Sum_probs=48.0

Q ss_pred             CCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHH----HHHHH-cCCC-eEEecCCCcccHHHHHHHHHHHhC
Q 020768          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRL----SVAKE-LGAD-NIVKVSTNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       180 ~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~----~~~~~-~g~~-~vi~~~~~~~~~~~~~~~~~~~~~  252 (321)
                      ..+.+|||+|+ |.+|...++.+...|. .|++++++.++.    +.+.+ .+.. ..+..+-  .+ .+.+.++.+  .
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl--~d-~~~~~~~~~--~   76 (341)
T 3enk_A            3 STKGTILVTGGAGYIGSHTAVELLAHGY-DVVIADNLVNSKREAIARIEKITGKTPAFHETDV--SD-ERALARIFD--A   76 (341)
T ss_dssp             CSSCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCT--TC-HHHHHHHHH--H
T ss_pred             CCCcEEEEecCCcHHHHHHHHHHHHCCC-cEEEEecCCcchHHHHHHHHhhcCCCceEEEeec--CC-HHHHHHHHh--c
Confidence            34679999998 9999999999999998 677776654322    11221 2322 2222221  12 223333332  2


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      .++|+||.+.+.
T Consensus        77 ~~~d~vih~A~~   88 (341)
T 3enk_A           77 HPITAAIHFAAL   88 (341)
T ss_dssp             SCCCEEEECCCC
T ss_pred             cCCcEEEECccc
Confidence            479999999874

>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*

Probab=96.10  E-value=0.027  Score=44.40  Aligned_cols=103  Identities=14%  Similarity=0.154  Sum_probs=63.7

Q ss_pred             cCCCCCCEEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCc
Q 020768          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (321)
Q Consensus       177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~  255 (321)
                      ..++++++||-+|+|. |..+..+++..|. ..+++++.++ ..+.    .--.++..+-...+..+.+...  .....+
T Consensus        18 ~~~~~~~~vLd~G~G~-G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----~~~~~~~~d~~~~~~~~~~~~~--~~~~~~   89 (180)
T 1ej0_A           18 KLFKPGMTVVDLGAAP-GGWSQYVVTQIGGKGRIIACDLLP-MDPI----VGVDFLQGDFRDELVMKALLER--VGDSKV   89 (180)
T ss_dssp             CCCCTTCEEEEESCTT-CHHHHHHHHHHCTTCEEEEEESSC-CCCC----TTEEEEESCTTSHHHHHHHHHH--HTTCCE
T ss_pred             CCCCCCCeEEEeCCCC-CHHHHHHHHHhCCCCeEEEEECcc-cccc----CcEEEEEcccccchhhhhhhcc--CCCCce
Confidence            3478899999999976 8888888888642 3799999877 3322    1111222111111111112111  124679


Q ss_pred             cEEEEc-----CCC------------HHHHHHHHHHcccCCEEEEEcCC
Q 020768          256 DVSFDC-----AGF------------NKTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       256 d~vid~-----~g~------------~~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      |+|+..     .+.            ...+..+.+.|+++|.+++....
T Consensus        90 D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~  138 (180)
T 1ej0_A           90 QVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQ  138 (180)
T ss_dssp             EEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred             eEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence            999983     333            36678889999999999986644

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=96.09  E-value=0.033  Score=48.36  Aligned_cols=98  Identities=10%  Similarity=0.101  Sum_probs=65.6

Q ss_pred             HHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHH-HHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRL-SVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       173 ~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~-~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      +++......+.+++|+|+|+.+.+++..+...|++.+.++.++.+|. +++++++.+ . .  ..   .    .      
T Consensus       110 ~l~~~~~~~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~-~-~--~~---~----~------  172 (271)
T 1npy_A          110 LIEKYHLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYA-Y-I--NS---L----E------  172 (271)
T ss_dssp             HHHHTTCCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCE-E-E--SC---C----T------
T ss_pred             HHHHhCCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-c-c--hh---h----h------
Confidence            34444445678999999999999999999999987788888887774 455667652 1 1  10   0    0      


Q ss_pred             CCCccEEEEcCCCHHH-------HHHHHHHcccCCEEEEEcCC
Q 020768          252 GTGIDVSFDCAGFNKT-------MSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       252 ~~~~d~vid~~g~~~~-------~~~~~~~l~~~G~~v~~g~~  287 (321)
                      -..+|+||++++....       .......+.++..++.+-+.
T Consensus       173 ~~~~DivInaTp~gm~~~~~~~~~~~~~~~l~~~~~v~DlvY~  215 (271)
T 1npy_A          173 NQQADILVNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVAM  215 (271)
T ss_dssp             TCCCSEEEECSSTTCTTSTTTTSCSSCHHHHHHCSEEEECCCS
T ss_pred             cccCCEEEECCCCCccCccccCCCCCCHHHcCCCCEEEEeecC
Confidence            1358999999986421       01113456677777777653

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=96.08  E-value=0.029  Score=48.74  Aligned_cols=117  Identities=16%  Similarity=0.147  Sum_probs=72.2

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHH-HHHHcCC--CeEEecCCCcccHHHHHHHHHHHhCCCccE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGA--DNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~-~~~~~g~--~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      .+.+++|+|+|++|.+++..+...|+..|.++.++.+|.+ ++++++.  ..++.++    +       +.   ...+|+
T Consensus       119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~----~-------l~---~~~~Di  184 (272)
T 3pwz_A          119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYE----A-------LE---GQSFDI  184 (272)
T ss_dssp             TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSG----G-------GT---TCCCSE
T ss_pred             cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHH----H-------hc---ccCCCE
Confidence            5789999999999999999999999878888888887755 4556653  1222211    1       10   156899


Q ss_pred             EEEcCCCHHHH---HHHHHHcccCCEEEEEcCCCCCccccchhhhccce--EEEEeehhH
Q 020768          258 SFDCAGFNKTM---STALSATRAGGKVCLVGMGHLEMTVPLTPAAARYL--IYSFLFHFF  312 (321)
Q Consensus       258 vid~~g~~~~~---~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~--~i~g~~~~~  312 (321)
                      ||++++....-   ..-...++++..++.+-+...+.++ +...-.++.  ++-|.-|..
T Consensus       185 vInaTp~gm~~~~~~i~~~~l~~~~~V~DlvY~P~~T~l-l~~A~~~G~~~~~~Gl~ML~  243 (272)
T 3pwz_A          185 VVNATSASLTADLPPLPADVLGEAALAYELAYGKGLTPF-LRLAREQGQARLADGVGMLV  243 (272)
T ss_dssp             EEECSSGGGGTCCCCCCGGGGTTCSEEEESSCSCCSCHH-HHHHHHHSCCEEECTHHHHH
T ss_pred             EEECCCCCCCCCCCCCCHHHhCcCCEEEEeecCCCCCHH-HHHHHHCCCCEEECCHHHHH
Confidence            99998753110   0112457777777777655332222 122344453  455555443

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=96.06  E-value=0.041  Score=46.51  Aligned_cols=105  Identities=15%  Similarity=0.199  Sum_probs=68.1

Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHh-
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAM-  251 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~~~-  251 (321)
                      ...++++||-+|+|. |..++.+++.+. ...+++++.+++..+.+++    .|...-+.+..  .+..+.+..+...+ 
T Consensus        67 ~~~~~~~VLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~--gda~~~l~~l~~~~~  143 (237)
T 3c3y_A           67 KLVNAKKTIEVGVFT-GYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIE--SDAMLALDNLLQGQE  143 (237)
T ss_dssp             HHTTCCEEEEECCTT-SHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE--SCHHHHHHHHHHSTT
T ss_pred             HhhCCCEEEEeCCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--cCHHHHHHHHHhccC
Confidence            345678999998753 777788888863 3489999999988877754    45532121111  23333343332211 


Q ss_pred             -CCCccEEEEcCCC---HHHHHHHHHHcccCCEEEEEc
Q 020768          252 -GTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       252 -~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  285 (321)
                       ...||+||-....   ...++.+.+.|++||.++.-.
T Consensus       144 ~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d~  181 (237)
T 3c3y_A          144 SEGSYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYDN  181 (237)
T ss_dssp             CTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCCcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEec
Confidence             3579999965432   346788899999999998754

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.06  E-value=0.042  Score=47.99  Aligned_cols=98  Identities=17%  Similarity=0.226  Sum_probs=61.8

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHH-HHHHcCC----CeEEecCCCcccHHHHHHHHHHHhCCC
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGA----DNIVKVSTNLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~-~~~~~g~----~~vi~~~~~~~~~~~~~~~~~~~~~~~  254 (321)
                      -.+.+++|+|+|++|.+++..+...|++.|.+++++.+|.+ ++++++.    ..+...+  ..++.+.+        ..
T Consensus       125 l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~--~~~l~~~l--------~~  194 (283)
T 3jyo_A          125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVD--ARGIEDVI--------AA  194 (283)
T ss_dssp             CCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEEC--STTHHHHH--------HH
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcC--HHHHHHHH--------hc
Confidence            35789999999999999999999999977888889888765 3344431    1121111  11222222        24


Q ss_pred             ccEEEEcCCCHHH----HHHHHHHcccCCEEEEEcCC
Q 020768          255 IDVSFDCAGFNKT----MSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       255 ~d~vid~~g~~~~----~~~~~~~l~~~G~~v~~g~~  287 (321)
                      +|+||+|++..-.    .......++++..++.+-+.
T Consensus       195 ~DiVInaTp~Gm~~~~~~pi~~~~l~~~~~v~DlvY~  231 (283)
T 3jyo_A          195 ADGVVNATPMGMPAHPGTAFDVSCLTKDHWVGDVVYM  231 (283)
T ss_dssp             SSEEEECSSTTSTTSCSCSSCGGGCCTTCEEEECCCS
T ss_pred             CCEEEECCCCCCCCCCCCCCCHHHhCCCCEEEEecCC
Confidence            7999999874210    01123456777666666554

>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*

Probab=96.05  E-value=0.024  Score=49.39  Aligned_cols=96  Identities=19%  Similarity=0.234  Sum_probs=65.0

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHc-----CC---------CeEEecCCCcccHHHHHH
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL-----GA---------DNIVKVSTNLQDIAEEVE  245 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~-----g~---------~~vi~~~~~~~~~~~~~~  245 (321)
                      ..+.+||++|+|. |..+..+++. +...+++++.+++..+.+++.     +.         ..+-.. .  .|..+.+.
T Consensus        74 ~~~~~VLdiG~G~-G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~-~--~D~~~~l~  148 (281)
T 1mjf_A           74 PKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLT-I--GDGFEFIK  148 (281)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEE-E--SCHHHHHH
T ss_pred             CCCCeEEEEcCCc-CHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEE-E--CchHHHhc
Confidence            4568999998754 6666777777 766899999999999888753     21         111111 1  23222222


Q ss_pred             HHHHHhCCCccEEEEcCC----------CHHHHHHHHHHcccCCEEEEEc
Q 020768          246 KIQKAMGTGIDVSFDCAG----------FNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       246 ~~~~~~~~~~d~vid~~g----------~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      .     ...+|+|+-...          ..+.++.+.+.|+++|.++...
T Consensus       149 ~-----~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~  193 (281)
T 1mjf_A          149 N-----NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA  193 (281)
T ss_dssp             H-----CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             c-----cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence            1     467999886543          2456889999999999998863

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=96.05  E-value=0.069  Score=49.28  Aligned_cols=86  Identities=17%  Similarity=0.072  Sum_probs=50.5

Q ss_pred             cCCCCCCEEEEEcC-ChhHHH--HHHHHHHcCCCeEEEEeCChh---------------H-HHHHHHcCCCe-EEecCCC
Q 020768          177 ANIGPETNVLIMGA-GPIGLV--TMLGARAFGAPRIVIVDVDDY---------------R-LSVAKELGADN-IVKVSTN  236 (321)
Q Consensus       177 ~~~~~g~~vlI~Ga-g~vG~~--a~qla~~~g~~~vv~v~~~~~---------------~-~~~~~~~g~~~-vi~~~~~  236 (321)
                      ..+..|+++||+|+ +++|.+  .+......|+ .|++++++.+               . .+.+++.|... .+..+-.
T Consensus        55 ~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvt  133 (418)
T 4eue_A           55 IGFRGPKKVLIVGASSGFGLATRISVAFGGPEA-HTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAF  133 (418)
T ss_dssp             CCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCC-EEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred             CcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCC-EEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCC
Confidence            34577899999998 999998  4444444588 5777665422               1 22345566543 2222222


Q ss_pred             -cccHHHHHHHHHHHhCCCccEEEEcCCC
Q 020768          237 -LQDIAEEVEKIQKAMGTGIDVSFDCAGF  264 (321)
Q Consensus       237 -~~~~~~~~~~~~~~~~~~~d~vid~~g~  264 (321)
                       .++..+.+.++.+. .+++|++++++|.
T Consensus       134 d~~~v~~~v~~i~~~-~G~IDiLVnNAG~  161 (418)
T 4eue_A          134 SNETKDKVIKYIKDE-FGKIDLFVYSLAA  161 (418)
T ss_dssp             CHHHHHHHHHHHHHT-TCCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHH-cCCCCEEEECCcc
Confidence             23333344444332 4579999998775

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.04  E-value=0.044  Score=48.01  Aligned_cols=36  Identities=28%  Similarity=0.398  Sum_probs=31.4

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~  216 (321)
                      ...+|+|+|+|++|..++..+...|...+..+|.+.
T Consensus        35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~   70 (292)
T 3h8v_A           35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK   70 (292)
T ss_dssp             GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence            356999999999999999999999998888888654

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=96.04  E-value=0.028  Score=47.52  Aligned_cols=93  Identities=19%  Similarity=0.189  Sum_probs=56.2

Q ss_pred             CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 020768          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  261 (321)
                      +++||+|+ |++|...+..+...|. .|++++++.++.+.      .    +..+..+ .+.+.++.+...+++|++|.+
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~------~----~~~D~~~-~~~~~~~~~~~~~~~d~vi~~   69 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGH-TVIGIDRGQADIEA------D----LSTPGGR-ETAVAAVLDRCGGVLDGLVCC   69 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSEEC------C----TTSHHHH-HHHHHHHHHHHTTCCSEEEEC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCChhHccc------c----ccCCccc-HHHHHHHHHHcCCCccEEEEC
Confidence            37899998 9999999998888898 68888777654211      1    1111111 122333322223579999999


Q ss_pred             CCCHH------------------HHHHHHHHccc--CCEEEEEcCC
Q 020768          262 AGFNK------------------TMSTALSATRA--GGKVCLVGMG  287 (321)
Q Consensus       262 ~g~~~------------------~~~~~~~~l~~--~G~~v~~g~~  287 (321)
                      .|...                  .++.+.+.++.  .++++.+++.
T Consensus        70 Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~  115 (255)
T 2dkn_A           70 AGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSI  115 (255)
T ss_dssp             CCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCG
T ss_pred             CCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecc
Confidence            87421                  22344444433  3899999854

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=96.04  E-value=0.018  Score=51.85  Aligned_cols=90  Identities=19%  Similarity=0.236  Sum_probs=63.9

Q ss_pred             CCCEEEEEcCChhHHHHHHHHH-HcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGAR-AFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~-~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      .|.+|.|+|.|.+|...++.++ .+|. .|++.+++.++.+.+.++|+..+    .   ++.+.+.        ..|+|+
T Consensus       162 ~g~~vgIIG~G~IG~~vA~~l~~~~G~-~V~~~d~~~~~~~~~~~~g~~~~----~---~l~ell~--------~aDvVi  225 (348)
T 2w2k_A          162 RGHVLGAVGLGAIQKEIARKAVHGLGM-KLVYYDVAPADAETEKALGAERV----D---SLEELAR--------RSDCVS  225 (348)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCC-EEEEECSSCCCHHHHHHHTCEEC----S---SHHHHHH--------HCSEEE
T ss_pred             CCCEEEEEEECHHHHHHHHHHHHhcCC-EEEEECCCCcchhhHhhcCcEEe----C---CHHHHhc--------cCCEEE
Confidence            5779999999999999999999 9999 68888888776666666675321    1   2222221        369999


Q ss_pred             EcCCCHH----HH-HHHHHHcccCCEEEEEcC
Q 020768          260 DCAGFNK----TM-STALSATRAGGKVCLVGM  286 (321)
Q Consensus       260 d~~g~~~----~~-~~~~~~l~~~G~~v~~g~  286 (321)
                      .++....    .+ ...+..++++..++.++.
T Consensus       226 l~vp~~~~t~~li~~~~l~~mk~gailin~sr  257 (348)
T 2w2k_A          226 VSVPYMKLTHHLIDEAFFAAMKPGSRIVNTAR  257 (348)
T ss_dssp             ECCCCSGGGTTCBCHHHHHHSCTTEEEEECSC
T ss_pred             EeCCCChHHHHHhhHHHHhcCCCCCEEEECCC
Confidence            9887532    12 356678888887777663

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=96.04  E-value=0.011  Score=53.67  Aligned_cols=91  Identities=16%  Similarity=0.261  Sum_probs=66.5

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      .|.+|.|+|.|.+|...++.++.+|++.|++.+++.++.+.+.++|+..+       .++.    ++.    ...|+|+.
T Consensus       163 ~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~-------~~l~----ell----~~aDvV~l  227 (364)
T 2j6i_A          163 EGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRV-------ENIE----ELV----AQADIVTV  227 (364)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEEC-------SSHH----HHH----HTCSEEEE
T ss_pred             CCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEec-------CCHH----HHH----hcCCEEEE
Confidence            57899999999999999999999999438888877766667777775321       1222    221    24799999


Q ss_pred             cCCCHH----HH-HHHHHHcccCCEEEEEcC
Q 020768          261 CAGFNK----TM-STALSATRAGGKVCLVGM  286 (321)
Q Consensus       261 ~~g~~~----~~-~~~~~~l~~~G~~v~~g~  286 (321)
                      ++....    .+ ...+..+++++.++.++.
T Consensus       228 ~~P~t~~t~~li~~~~l~~mk~ga~lIn~ar  258 (364)
T 2j6i_A          228 NAPLHAGTKGLINKELLSKFKKGAWLVNTAR  258 (364)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             CCCCChHHHHHhCHHHHhhCCCCCEEEECCC
Confidence            887631    22 356788999988888884

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=96.04  E-value=0.031  Score=47.07  Aligned_cols=81  Identities=19%  Similarity=0.183  Sum_probs=49.8

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEE-eCChhHHHHH----HHcCCCe-E-EecCCC-cccHHHHHHHHHHHhC
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIV-DVDDYRLSVA----KELGADN-I-VKVSTN-LQDIAEEVEKIQKAMG  252 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v-~~~~~~~~~~----~~~g~~~-v-i~~~~~-~~~~~~~~~~~~~~~~  252 (321)
                      ++++||+|+ |++|...++.+...|+ .|+++ +++.++.+.+    ++.+... . +..+-. .++..+.+.++.+. .
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   78 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGF-ALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEV-L   78 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHH-H
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHh-c
Confidence            357999998 9999999999988998 56666 7776655432    2234332 2 222222 22333333333322 2


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      +++|++|.+.|.
T Consensus        79 ~~~d~li~~Ag~   90 (245)
T 2ph3_A           79 GGLDTLVNNAGI   90 (245)
T ss_dssp             TCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999873

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=96.03  E-value=0.039  Score=48.32  Aligned_cols=92  Identities=18%  Similarity=0.246  Sum_probs=55.8

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCC-----hhHHHHHHH---cCCCeEEecCCCcccHHHHHHHHHHHhC
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD-----DYRLSVAKE---LGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~-----~~~~~~~~~---~g~~~vi~~~~~~~~~~~~~~~~~~~~~  252 (321)
                      ..+|||+|+ |.+|...++.+...|. .|++++++     +++.+.++.   .++. ++..+-  .+. +.+.+..    
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~-~~~~D~--~d~-~~l~~~~----   74 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRPEVVSNIDKVQMLLYFKQLGAK-LIEASL--DDH-QRLVDAL----   74 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCSCCSSCHHHHHHHHHHHTTTCE-EECCCS--SCH-HHHHHHH----
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCC-cEEEEECCCcccchhHHHHHHHHHhCCeE-EEeCCC--CCH-HHHHHHH----
Confidence            457999998 9999999999888898 57777666     344444333   2332 222221  222 2333332    


Q ss_pred             CCccEEEEcCCCH------HHHHHHHHHcccCC---EEE
Q 020768          253 TGIDVSFDCAGFN------KTMSTALSATRAGG---KVC  282 (321)
Q Consensus       253 ~~~d~vid~~g~~------~~~~~~~~~l~~~G---~~v  282 (321)
                      .++|+||.+++..      .....+++.++..|   +++
T Consensus        75 ~~~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v  113 (313)
T 1qyd_A           75 KQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFL  113 (313)
T ss_dssp             TTCSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEE
T ss_pred             hCCCEEEECCccccchhhHHHHHHHHHHHHhcCCCceEE
Confidence            3699999998743      12345555554444   776

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=96.02  E-value=0.035  Score=48.42  Aligned_cols=125  Identities=10%  Similarity=-0.054  Sum_probs=73.9

Q ss_pred             HHHHcCCC-CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHH-HHHHcCC---CeEEecCCCcccHHHHHHHH
Q 020768          173 ACRRANIG-PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGA---DNIVKVSTNLQDIAEEVEKI  247 (321)
Q Consensus       173 ~l~~~~~~-~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~-~~~~~g~---~~vi~~~~~~~~~~~~~~~~  247 (321)
                      +++...+. .+.+++|+|+|++|..++..+...|+..|.++.++.++.+ ++++++.   -.+..+++           +
T Consensus       116 ~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~-----------l  184 (281)
T 3o8q_A          116 DLLAQQVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQ-----------L  184 (281)
T ss_dssp             HHHHTTCCCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG-----------C
T ss_pred             HHHHhCCCccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHH-----------h
Confidence            34443333 5789999999999999999888899877888888887755 4455542   12222111           1


Q ss_pred             HHHhCCCccEEEEcCCCHHHHHH---HHHHcccCCEEEEEcCCCCCccccchhhhccce--EEEEeehhHH
Q 020768          248 QKAMGTGIDVSFDCAGFNKTMST---ALSATRAGGKVCLVGMGHLEMTVPLTPAAARYL--IYSFLFHFFL  313 (321)
Q Consensus       248 ~~~~~~~~d~vid~~g~~~~~~~---~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~--~i~g~~~~~~  313 (321)
                          ...+|+||+|++....-+.   -...++++..++.+.+...+.++ +...-.++.  ++-|.-|...
T Consensus       185 ----~~~aDiIInaTp~gm~~~~~~l~~~~l~~~~~V~DlvY~P~~T~l-l~~A~~~G~~~~~~Gl~Mlv~  250 (281)
T 3o8q_A          185 ----KQSYDVIINSTSASLDGELPAIDPVIFSSRSVCYDMMYGKGYTVF-NQWARQHGCAQAIDGLGMLVG  250 (281)
T ss_dssp             ----CSCEEEEEECSCCCC----CSCCGGGEEEEEEEEESCCCSSCCHH-HHHHHHTTCSEEECTHHHHHH
T ss_pred             ----cCCCCEEEEcCcCCCCCCCCCCCHHHhCcCCEEEEecCCCccCHH-HHHHHHCCCCEEECcHHHHHH
Confidence                2468999999876421110   12456666666666654322222 223444554  4555555443

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.02  E-value=0.06  Score=47.70  Aligned_cols=93  Identities=20%  Similarity=0.146  Sum_probs=64.0

Q ss_pred             CEEEEEcCChhHHHHHHHHHHcCCC-eEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 020768          183 TNVLIMGAGPIGLVTMLGARAFGAP-RIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~g~~-~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  261 (321)
                      .+|.|+|+|.+|...++.++..|.. .|++.++++++.+.+.++|......  .+..+.      .    -...|+||.|
T Consensus        34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~--~~~~~~------~----~~~aDvVila  101 (314)
T 3ggo_A           34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGT--TSIAKV------E----DFSPDFVMLS  101 (314)
T ss_dssp             SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEE--SCTTGG------G----GGCCSEEEEC
T ss_pred             CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhc--CCHHHH------h----hccCCEEEEe
Confidence            6899999999999999999988873 5888999999999998888632111  111110      0    1357888888


Q ss_pred             CCCHH---HHHHHHHHcccCCEEEEEcCC
Q 020768          262 AGFNK---TMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       262 ~g~~~---~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      +....   .+..+...++++..++.++..
T Consensus       102 vp~~~~~~vl~~l~~~l~~~~iv~d~~Sv  130 (314)
T 3ggo_A          102 SPVRTFREIAKKLSYILSEDATVTDQGSV  130 (314)
T ss_dssp             SCGGGHHHHHHHHHHHSCTTCEEEECCSC
T ss_pred             CCHHHHHHHHHHHhhccCCCcEEEECCCC
Confidence            88643   233444556777777766643

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=96.02  E-value=0.053  Score=44.58  Aligned_cols=99  Identities=12%  Similarity=0.046  Sum_probs=62.8

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHc-CC---------------C--eEEecCC
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL-GA---------------D--NIVKVST  235 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~-g~---------------~--~vi~~~~  235 (321)
                      +....+.++.+||-.|+|. |..+..+++. |. .|+++|.+++-.+.+++. +.               .  ..+.-  
T Consensus        15 ~~~l~~~~~~~vLD~GCG~-G~~~~~la~~-g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--   89 (203)
T 1pjz_A           15 WSSLNVVPGARVLVPLCGK-SQDMSWLSGQ-GY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCG--   89 (203)
T ss_dssp             HHHHCCCTTCEEEETTTCC-SHHHHHHHHH-CC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEE--
T ss_pred             HHhcccCCCCEEEEeCCCC-cHhHHHHHHC-CC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEEC--
Confidence            3445678899999999864 6667777775 87 799999999998888753 21               1  11111  


Q ss_pred             CcccHHHHHHHHHHHhCCCccEEEEcCC----C----HHHHHHHHHHcccCCEEEEE
Q 020768          236 NLQDIAEEVEKIQKAMGTGIDVSFDCAG----F----NKTMSTALSATRAGGKVCLV  284 (321)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~d~vid~~g----~----~~~~~~~~~~l~~~G~~v~~  284 (321)
                      +..++..  ..     ...||+|++...    .    ...++.+.+.|++||+++++
T Consensus        90 d~~~l~~--~~-----~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~  139 (203)
T 1pjz_A           90 DFFALTA--RD-----IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLI  139 (203)
T ss_dssp             CCSSSTH--HH-----HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred             ccccCCc--cc-----CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence            1111110  00     136999997321    1    12567888999999994444

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=96.02  E-value=0.015  Score=50.38  Aligned_cols=96  Identities=15%  Similarity=0.206  Sum_probs=59.9

Q ss_pred             EEEEEcC-ChhHHHHHHHHHHc--CCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          184 NVLIMGA-GPIGLVTMLGARAF--GAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       184 ~vlI~Ga-g~vG~~a~qla~~~--g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      +|||+|+ |.+|...++.+...  |. .|++++++.++.+.+...++.. +..+-  .+. +.+.+.    -.++|+||.
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~l~~~~~~~-~~~D~--~d~-~~l~~~----~~~~d~vi~   72 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPAS-QIIAIVRNVEKASTLADQGVEV-RHGDY--NQP-ESLQKA----FAGVSKLLF   72 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTTHHHHHTTCEE-EECCT--TCH-HHHHHH----TTTCSEEEE
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCC-eEEEEEcCHHHHhHHhhcCCeE-EEecc--CCH-HHHHHH----HhcCCEEEE
Confidence            6899998 99999998888877  87 5777777776655544444432 22221  121 233333    246999999


Q ss_pred             cCCCH-------HHHHHHHHHcccC--CEEEEEcCCC
Q 020768          261 CAGFN-------KTMSTALSATRAG--GKVCLVGMGH  288 (321)
Q Consensus       261 ~~g~~-------~~~~~~~~~l~~~--G~~v~~g~~~  288 (321)
                      +.+..       .....+++.+...  ++++.+++..
T Consensus        73 ~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~  109 (287)
T 2jl1_A           73 ISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAF  109 (287)
T ss_dssp             CCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETT
T ss_pred             cCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence            98741       1233445555444  4888887543

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=96.01  E-value=0.03  Score=46.96  Aligned_cols=78  Identities=18%  Similarity=0.160  Sum_probs=50.7

Q ss_pred             CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-HcCCCe-EEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADN-IVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~g~~~-vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      +++||+|+ |++|...+..+...|+ .|++++++.++.+.+. +++... .+..+-  .+ .+.+.++.+.....+|+++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~--~~-~~~v~~~~~~~~~~~d~lv   77 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGK-ATYLTGRSESKLSTVTNCLSNNVGYRARDL--AS-HQEVEQLFEQLDSIPSTVV   77 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTCSSCCCEEECCT--TC-HHHHHHHHHSCSSCCSEEE
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhccCeEeecC--CC-HHHHHHHHHHHhhcCCEEE
Confidence            36899998 9999999999999999 5888888888776554 444221 222221  12 2234444333334459999


Q ss_pred             EcCCC
Q 020768          260 DCAGF  264 (321)
Q Consensus       260 d~~g~  264 (321)
                      .+.|.
T Consensus        78 ~~Ag~   82 (230)
T 3guy_A           78 HSAGS   82 (230)
T ss_dssp             ECCCC
T ss_pred             EeCCc
Confidence            99883

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=96.01  E-value=0.078  Score=46.93  Aligned_cols=107  Identities=13%  Similarity=0.110  Sum_probs=62.7

Q ss_pred             HHHHcCCC-CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC---hhHHHH-HHHcC----CC-eEEecCCCcccHHH
Q 020768          173 ACRRANIG-PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD---DYRLSV-AKELG----AD-NIVKVSTNLQDIAE  242 (321)
Q Consensus       173 ~l~~~~~~-~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~---~~~~~~-~~~~g----~~-~vi~~~~~~~~~~~  242 (321)
                      +++...+. .+.++||+|+|++|.+++..+...|++.|.++.++   .+|.+. +++++    .. ..+.+.    +.. 
T Consensus       138 ~L~~~~~~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~----~l~-  212 (312)
T 3t4e_A          138 AIKESGFDMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLA----DQH-  212 (312)
T ss_dssp             HHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETT----CHH-
T ss_pred             HHHhcCCCcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechH----hhh-
Confidence            34443333 57899999999999999999999999888888888   555443 33332    21 122221    110 


Q ss_pred             HHHHHHHHhCCCccEEEEcCCCHHH--HH-H---HHHHcccCCEEEEEcCCC
Q 020768          243 EVEKIQKAMGTGIDVSFDCAGFNKT--MS-T---ALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       243 ~~~~~~~~~~~~~d~vid~~g~~~~--~~-~---~~~~l~~~G~~v~~g~~~  288 (321)
                      .+.+..    ..+|+||+|++..-.  -. .   -...+.++..++.+-+..
T Consensus       213 ~~~~~l----~~~DiIINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P  260 (312)
T 3t4e_A          213 AFTEAL----ASADILTNGTKVGMKPLENESLIGDVSLLRPELLVTECVYNP  260 (312)
T ss_dssp             HHHHHH----HHCSEEEECSSTTSTTSTTCCSCCCGGGSCTTCEEEECCCSS
T ss_pred             hhHhhc----cCceEEEECCcCCCCCCCCCcccCCHHHcCCCCEEEEeccCC
Confidence            111111    247999999875310  00 0   124566666666666543

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=96.00  E-value=0.027  Score=50.76  Aligned_cols=89  Identities=19%  Similarity=0.167  Sum_probs=64.1

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      .|.+|.|+|.|.+|...++.++.+|+ .|++.+++. +.+.+.+.|+..+       .++.+.+.        ..|+|+.
T Consensus       159 ~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~~~~~g~~~~-------~~l~ell~--------~aDiV~l  221 (352)
T 3gg9_A          159 KGQTLGIFGYGKIGQLVAGYGRAFGM-NVLVWGREN-SKERARADGFAVA-------ESKDALFE--------QSDVLSV  221 (352)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSHH-HHHHHHHTTCEEC-------SSHHHHHH--------HCSEEEE
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEECCCC-CHHHHHhcCceEe-------CCHHHHHh--------hCCEEEE
Confidence            36789999999999999999999999 688887765 4455666776421       12222222        3699999


Q ss_pred             cCCCHH-H----HHHHHHHcccCCEEEEEcC
Q 020768          261 CAGFNK-T----MSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       261 ~~g~~~-~----~~~~~~~l~~~G~~v~~g~  286 (321)
                      ++.... +    -...+..++++..++.++-
T Consensus       222 ~~Plt~~t~~li~~~~l~~mk~gailIN~aR  252 (352)
T 3gg9_A          222 HLRLNDETRSIITVADLTRMKPTALFVNTSR  252 (352)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred             eccCcHHHHHhhCHHHHhhCCCCcEEEECCC
Confidence            886421 1    2366788999999999983

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=95.99  E-value=0.013  Score=53.12  Aligned_cols=48  Identities=27%  Similarity=0.324  Sum_probs=40.8

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHH-HHHHcCCC
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGAD  228 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~-~~~~~g~~  228 (321)
                      -.|.+|+|.|.|.+|..+++.+..+|+ .|++.+.+.++.+ +++++|++
T Consensus       171 L~GktV~V~G~G~VG~~~A~~L~~~Ga-kVvv~D~~~~~l~~~a~~~ga~  219 (364)
T 1leh_A          171 LEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGAD  219 (364)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCCE
T ss_pred             CCcCEEEEECchHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE
Confidence            478999999999999999999999999 5778998888766 55667754

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=95.97  E-value=0.025  Score=46.27  Aligned_cols=62  Identities=18%  Similarity=0.363  Sum_probs=40.4

Q ss_pred             EEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcC
Q 020768          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (321)
Q Consensus       184 ~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  262 (321)
                      ++||+|+ |++|...++.+. .|. .|++++++.+          ....|+.+ .+    .+.++.+.. +++|++|.+.
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~-~V~~~~r~~~----------~~~~D~~~-~~----~~~~~~~~~-~~~d~vi~~a   66 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKA-EVITAGRHSG----------DVTVDITN-ID----SIKKMYEQV-GKVDAIVSAT   66 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTS-EEEEEESSSS----------SEECCTTC-HH----HHHHHHHHH-CCEEEEEECC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCC-eEEEEecCcc----------ceeeecCC-HH----HHHHHHHHh-CCCCEEEECC
Confidence            7999998 999999998888 898 6777777654          11122221 11    222222211 4689999998


Q ss_pred             C
Q 020768          263 G  263 (321)
Q Consensus       263 g  263 (321)
                      |
T Consensus        67 g   67 (202)
T 3d7l_A           67 G   67 (202)
T ss_dssp             C
T ss_pred             C
Confidence            7

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=95.97  E-value=0.081  Score=47.81  Aligned_cols=112  Identities=16%  Similarity=0.115  Sum_probs=71.4

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  261 (321)
                      ..+|.|+|.|.+|...+..+...|. .|.+.++++++.+.+.+.|+...       .+..+.+..     -..+|+||-+
T Consensus        22 ~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~g~~~~-------~s~~e~~~~-----a~~~DvVi~~   88 (358)
T 4e21_A           22 SMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALEREGIAGA-------RSIEEFCAK-----LVKPRVVWLM   88 (358)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCBCC-------SSHHHHHHH-----SCSSCEEEEC
T ss_pred             CCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCEEe-------CCHHHHHhc-----CCCCCEEEEe
Confidence            4689999999999999998888998 78899999999888887765321       122332222     2346999999


Q ss_pred             CCCHHHHH----HHHHHcccCCEEEEEcCCCCCccccchh-hhccceEEEE
Q 020768          262 AGFNKTMS----TALSATRAGGKVCLVGMGHLEMTVPLTP-AAARYLIYSF  307 (321)
Q Consensus       262 ~g~~~~~~----~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~k~~~i~g  307 (321)
                      +..+ ...    .+...++++..++..+.........+.. +-.+++.+..
T Consensus        89 vp~~-~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vd  138 (358)
T 4e21_A           89 VPAA-VVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVD  138 (358)
T ss_dssp             SCGG-GHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEE
T ss_pred             CCHH-HHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEe
Confidence            9875 333    3334456666666666443322222222 3345555443

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=95.94  E-value=0.015  Score=52.49  Aligned_cols=90  Identities=19%  Similarity=0.234  Sum_probs=66.7

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      .|.+|.|+|.|.+|...++.++.+|+ .|++.+++..+.+.++++|+..+       .+    +.++    -...|+|+.
T Consensus       163 ~gktvGIIG~G~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~----l~el----l~~aDvV~l  226 (351)
T 3jtm_A          163 EGKTIGTVGAGRIGKLLLQRLKPFGC-NLLYHDRLQMAPELEKETGAKFV-------ED----LNEM----LPKCDVIVI  226 (351)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGCC-EEEEECSSCCCHHHHHHHCCEEC-------SC----HHHH----GGGCSEEEE
T ss_pred             cCCEEeEEEeCHHHHHHHHHHHHCCC-EEEEeCCCccCHHHHHhCCCeEc-------CC----HHHH----HhcCCEEEE
Confidence            47899999999999999999999999 68888887766777777776432       11    2222    134799999


Q ss_pred             cCCCH-H---H-HHHHHHHcccCCEEEEEcC
Q 020768          261 CAGFN-K---T-MSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       261 ~~g~~-~---~-~~~~~~~l~~~G~~v~~g~  286 (321)
                      ++... +   . -...+..++++..++.++-
T Consensus       227 ~~Plt~~t~~li~~~~l~~mk~gailIN~aR  257 (351)
T 3jtm_A          227 NMPLTEKTRGMFNKELIGKLKKGVLIVNNAR  257 (351)
T ss_dssp             CSCCCTTTTTCBSHHHHHHSCTTEEEEECSC
T ss_pred             CCCCCHHHHHhhcHHHHhcCCCCCEEEECcC
Confidence            88742 1   1 2466788999998888874

>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17

Probab=95.94  E-value=0.034  Score=48.29  Aligned_cols=97  Identities=16%  Similarity=0.122  Sum_probs=65.9

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHc------CC--CeEEecCCCcccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL------GA--DNIVKVSTNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~------g~--~~vi~~~~~~~~~~~~~~~~~~~~~  252 (321)
                      .+.+||++|+|. |..+..+++..+...+.+++-+++-.+.+++.      +.  ..+-...   .|..+.+..    ..
T Consensus        75 ~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~---~D~~~~l~~----~~  146 (275)
T 1iy9_A           75 NPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQV---DDGFMHIAK----SE  146 (275)
T ss_dssp             SCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEE---SCSHHHHHT----CC
T ss_pred             CCCEEEEECCch-HHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEE---CcHHHHHhh----CC
Confidence            568999998754 66666777766766899999999988888753      22  1111111   122222221    24


Q ss_pred             CCccEEEEcCCC----------HHHHHHHHHHcccCCEEEEEc
Q 020768          253 TGIDVSFDCAGF----------NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       253 ~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      ..+|+|+-....          .+.++.+.+.|+++|.++...
T Consensus       147 ~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~  189 (275)
T 1iy9_A          147 NQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT  189 (275)
T ss_dssp             SCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence            679999975532          368899999999999998874

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=95.94  E-value=0.022  Score=51.08  Aligned_cols=88  Identities=17%  Similarity=0.175  Sum_probs=65.8

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      .|.+|.|+|.|.+|...++.++.+|. .|++.+++.++ +.+.++|+..    .    ++    .++    -...|+|+.
T Consensus       164 ~g~tvgIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~----~----~l----~el----l~~aDvV~l  225 (335)
T 2g76_A          164 NGKTLGILGLGRIGREVATRMQSFGM-KTIGYDPIISP-EVSASFGVQQ----L----PL----EEI----WPLCDFITV  225 (335)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSSCH-HHHHHTTCEE----C----CH----HHH----GGGCSEEEE
T ss_pred             CcCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcch-hhhhhcCcee----C----CH----HHH----HhcCCEEEE
Confidence            56799999999999999999999999 68888887665 3566777642    1    11    222    135799999


Q ss_pred             cCCCHH----HH-HHHHHHcccCCEEEEEcC
Q 020768          261 CAGFNK----TM-STALSATRAGGKVCLVGM  286 (321)
Q Consensus       261 ~~g~~~----~~-~~~~~~l~~~G~~v~~g~  286 (321)
                      ++....    .+ ...+..+++++.++.++.
T Consensus       226 ~~P~t~~t~~li~~~~l~~mk~gailIN~ar  256 (335)
T 2g76_A          226 HTPLLPSTTGLLNDNTFAQCKKGVRVVNCAR  256 (335)
T ss_dssp             CCCCCTTTTTSBCHHHHTTSCTTEEEEECSC
T ss_pred             ecCCCHHHHHhhCHHHHhhCCCCcEEEECCC
Confidence            887642    12 357788999999999985

>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41

Probab=95.92  E-value=0.021  Score=48.78  Aligned_cols=100  Identities=20%  Similarity=0.233  Sum_probs=66.7

Q ss_pred             HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHc----CCCeEEecCCCcccHHHHHHHHHHH
Q 020768          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL----GADNIVKVSTNLQDIAEEVEKIQKA  250 (321)
Q Consensus       175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~----g~~~vi~~~~~~~~~~~~~~~~~~~  250 (321)
                      +....+++.+||-+|+| .|..+..+++.. . .+++++.+++..+.+++.    +...+.....+..++.        .
T Consensus        31 ~~l~~~~~~~vLDiGcG-~G~~~~~l~~~~-~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~--------~   99 (260)
T 1vl5_A           31 QIAALKGNEEVLDVATG-GGHVANAFAPFV-K-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP--------F   99 (260)
T ss_dssp             HHHTCCSCCEEEEETCT-TCHHHHHHGGGS-S-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC--------S
T ss_pred             HHhCCCCCCEEEEEeCC-CCHHHHHHHHhC-C-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCC--------C
Confidence            44567889999999987 477777777764 3 799999999888777643    4332211111111110        0


Q ss_pred             hCCCccEEEEcCCC------HHHHHHHHHHcccCCEEEEEc
Q 020768          251 MGTGIDVSFDCAGF------NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       251 ~~~~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      ....+|+|+....-      ...+..+.+.|+++|++++..
T Consensus       100 ~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~  140 (260)
T 1vl5_A          100 TDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD  140 (260)
T ss_dssp             CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence            13579999976432      357889999999999998864

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=95.92  E-value=0.021  Score=48.91  Aligned_cols=98  Identities=14%  Similarity=0.050  Sum_probs=62.8

Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH-cCC--------------------CeEEecCCC
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGA--------------------DNIVKVSTN  236 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~-~g~--------------------~~vi~~~~~  236 (321)
                      ...++.+||..|+|. |..+..+|+. |+ .|++++.+++-.+.+++ .+.                    ..+-.... 
T Consensus        65 ~~~~~~~vLD~GCG~-G~~~~~La~~-G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-  140 (252)
T 2gb4_A           65 KGQSGLRVFFPLCGK-AIEMKWFADR-GH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCC-  140 (252)
T ss_dssp             TTCCSCEEEETTCTT-CTHHHHHHHT-TC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEES-
T ss_pred             cCCCCCeEEEeCCCC-cHHHHHHHHC-CC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEEC-
Confidence            346789999999864 6667777765 88 79999999999988864 331                    11111111 


Q ss_pred             cccHHHHHHHHHHHhCCCccEEEEcCC-----C---HHHHHHHHHHcccCCEEEEEc
Q 020768          237 LQDIAEEVEKIQKAMGTGIDVSFDCAG-----F---NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~d~vid~~g-----~---~~~~~~~~~~l~~~G~~v~~g  285 (321)
                        |+.    ++.......||+|++...     .   ...++.+.+.|+|||+++++.
T Consensus       141 --D~~----~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~  191 (252)
T 2gb4_A          141 --SIF----DLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAV  191 (252)
T ss_dssp             --CTT----TGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             --ccc----cCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence              111    111111257999997432     1   235778889999999986543

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=95.91  E-value=0.064  Score=47.32  Aligned_cols=88  Identities=17%  Similarity=0.217  Sum_probs=62.1

Q ss_pred             CEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcC
Q 020768          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  262 (321)
                      .+|.|+|+|.+|...+..+...|. .|.+.++++++.+.+.+.|...   .    .+..+.+        ...|+||.|+
T Consensus        31 ~~I~iIG~G~mG~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~----~~~~~~~--------~~~DvVi~av   94 (316)
T 2uyy_A           31 KKIGFLGLGLMGSGIVSNLLKMGH-TVTVWNRTAEKCDLFIQEGARL---G----RTPAEVV--------STCDITFACV   94 (316)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSSGGGGHHHHHTTCEE---C----SCHHHHH--------HHCSEEEECC
T ss_pred             CeEEEEcccHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHcCCEE---c----CCHHHHH--------hcCCEEEEeC
Confidence            579999999999998888888898 5888888888888777766531   1    1222222        1379999999


Q ss_pred             CCHHHHHHHH-------HHcccCCEEEEEcC
Q 020768          263 GFNKTMSTAL-------SATRAGGKVCLVGM  286 (321)
Q Consensus       263 g~~~~~~~~~-------~~l~~~G~~v~~g~  286 (321)
                      ..+..+...+       ..+.++..++.++.
T Consensus        95 ~~~~~~~~v~~~~~~~~~~l~~~~~vv~~s~  125 (316)
T 2uyy_A           95 SDPKAAKDLVLGPSGVLQGIRPGKCYVDMST  125 (316)
T ss_dssp             SSHHHHHHHHHSTTCGGGGCCTTCEEEECSC
T ss_pred             CCHHHHHHHHcCchhHhhcCCCCCEEEECCC
Confidence            9766666555       34566667766653

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=95.90  E-value=0.086  Score=46.92  Aligned_cols=76  Identities=21%  Similarity=0.266  Sum_probs=47.7

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCCh----hHHHHHHHc------CCCeEEecCCCcccHHHHHHHHHH
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD----YRLSVAKEL------GADNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~----~~~~~~~~~------g~~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      .+.+|||+|+ |.+|...++.+...|. .|++++++.    +..+.++..      .--.++..+-  .+. +.+.++  
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl--~d~-~~~~~~--   97 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDI--RDL-TTCEQV--   97 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCT--TCH-HHHHHH--
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccC--CCH-HHHHHH--
Confidence            3579999998 9999999999999998 677777643    233333332      1112222221  222 233333  


Q ss_pred             HhCCCccEEEEcCCC
Q 020768          250 AMGTGIDVSFDCAGF  264 (321)
Q Consensus       250 ~~~~~~d~vid~~g~  264 (321)
                        -.++|+||.+++.
T Consensus        98 --~~~~d~Vih~A~~  110 (351)
T 3ruf_A           98 --MKGVDHVLHQAAL  110 (351)
T ss_dssp             --TTTCSEEEECCCC
T ss_pred             --hcCCCEEEECCcc
Confidence              2379999999984

>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}

Probab=95.89  E-value=0.024  Score=46.58  Aligned_cols=98  Identities=15%  Similarity=0.257  Sum_probs=66.1

Q ss_pred             CCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCC----eEEecCCCcccHHHHHHHHHHHhCCC
Q 020768          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD----NIVKVSTNLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       179 ~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~----~vi~~~~~~~~~~~~~~~~~~~~~~~  254 (321)
                      ++++.+||-+|+|. |..+..+++. |...+++++.+++..+.+++....    .++..+-  .++        ......
T Consensus        40 ~~~~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~--~~~--------~~~~~~  107 (215)
T 2pxx_A           40 LRPEDRILVLGCGN-SALSYELFLG-GFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDV--RKL--------DFPSAS  107 (215)
T ss_dssp             CCTTCCEEEETCTT-CSHHHHHHHT-TCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCT--TSC--------CSCSSC
T ss_pred             cCCCCeEEEECCCC-cHHHHHHHHc-CCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcch--hcC--------CCCCCc
Confidence            57889999999865 7777777776 444799999999999988764321    1222111  110        011356


Q ss_pred             ccEEEEcCC---------------------CHHHHHHHHHHcccCCEEEEEcCCC
Q 020768          255 IDVSFDCAG---------------------FNKTMSTALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       255 ~d~vid~~g---------------------~~~~~~~~~~~l~~~G~~v~~g~~~  288 (321)
                      +|+|+....                     ....+..+.+.|+++|++++.....
T Consensus       108 fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~  162 (215)
T 2pxx_A          108 FDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA  162 (215)
T ss_dssp             EEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred             ccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence            999996321                     1356788889999999999887543

>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*

Probab=95.89  E-value=0.09  Score=45.75  Aligned_cols=101  Identities=17%  Similarity=0.167  Sum_probs=66.1

Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHc-CC-------CeEEecCCCcccHHHHHHHHHH
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL-GA-------DNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~-g~-------~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      ...++.+||++|+|. |..+..+++..+...+++++.+++..+.+++. ..       ..+-..   ..|..+.+..   
T Consensus        75 ~~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~---~~D~~~~l~~---  147 (283)
T 2i7c_A           75 VSKEPKNVLVVGGGD-GGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVF---IEDASKFLEN---  147 (283)
T ss_dssp             TSSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEE---ESCHHHHHHH---
T ss_pred             cCCCCCeEEEEeCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEE---ECChHHHHHh---
Confidence            345678999998753 55666677765555899999999999988763 21       111111   1233332222   


Q ss_pred             HhCCCccEEEEcCCC----------HHHHHHHHHHcccCCEEEEEcC
Q 020768          250 AMGTGIDVSFDCAGF----------NKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       250 ~~~~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                       ....+|+|+-....          .+.++.+.+.|+++|.+++...
T Consensus       148 -~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~  193 (283)
T 2i7c_A          148 -VTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE  193 (283)
T ss_dssp             -CCSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred             -CCCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence             24679999863311          3678899999999999998753

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=95.88  E-value=0.12  Score=45.43  Aligned_cols=92  Identities=14%  Similarity=0.112  Sum_probs=64.2

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  261 (321)
                      ..+|.|+|.|.+|...++.+...|. .|++.++++++.+.+.+.|+...       .+..+.+.        ..|+||.+
T Consensus         9 ~~~IgiIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~~~e~~~--------~aDvVi~~   72 (306)
T 3l6d_A            9 EFDVSVIGLGAMGTIMAQVLLKQGK-RVAIWNRSPGKAAALVAAGAHLC-------ESVKAALS--------ASPATIFV   72 (306)
T ss_dssp             SCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTCEEC-------SSHHHHHH--------HSSEEEEC
T ss_pred             CCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeec-------CCHHHHHh--------cCCEEEEE
Confidence            4679999999999999988888998 58888999999888877775321       12222221        36899999


Q ss_pred             CCCHHHHHHHHH-----HcccCCEEEEEcCCCC
Q 020768          262 AGFNKTMSTALS-----ATRAGGKVCLVGMGHL  289 (321)
Q Consensus       262 ~g~~~~~~~~~~-----~l~~~G~~v~~g~~~~  289 (321)
                      +..+..+...+.     .+.++..++.++....
T Consensus        73 vp~~~~~~~v~~~~~l~~~~~g~ivid~st~~~  105 (306)
T 3l6d_A           73 LLDNHATHEVLGMPGVARALAHRTIVDYTTNAQ  105 (306)
T ss_dssp             CSSHHHHHHHHTSTTHHHHTTTCEEEECCCCCT
T ss_pred             eCCHHHHHHHhcccchhhccCCCEEEECCCCCH
Confidence            997654554442     3456666666664433

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=95.88  E-value=0.012  Score=49.96  Aligned_cols=75  Identities=17%  Similarity=0.053  Sum_probs=49.8

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEE-e--CChhHHHHH-HHc-CCCeEEecCCCcccHHHHHHHHHHHhCCCc
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIV-D--VDDYRLSVA-KEL-GADNIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v-~--~~~~~~~~~-~~~-g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~  255 (321)
                      ++++||+|+ |++|...++.+...|+ .|+++ +  ++.++.+.+ +++ +.+ +.+    ..+..+.+.++.+. .+++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~r~~~~~~~~~~~~~~~~-~~~----~~~v~~~~~~~~~~-~g~i   73 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGY-TVVCHDASFADAAERQRFESENPGTI-ALA----EQKPERLVDATLQH-GEAI   73 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHSTTEE-ECC----CCCGGGHHHHHGGG-SSCE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCcCCHHHHHHHHHHhCCCc-ccC----HHHHHHHHHHHHHH-cCCC
Confidence            468999998 9999999999999999 68877 5  777766544 444 322 222    22333334443322 3579


Q ss_pred             cEEEEcCC
Q 020768          256 DVSFDCAG  263 (321)
Q Consensus       256 d~vid~~g  263 (321)
                      |++|++.|
T Consensus        74 D~lv~~Ag   81 (244)
T 1zmo_A           74 DTIVSNDY   81 (244)
T ss_dssp             EEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A

Probab=95.88  E-value=0.053  Score=46.93  Aligned_cols=105  Identities=19%  Similarity=0.232  Sum_probs=65.3

Q ss_pred             HcCCCCCCEEEEEcCChhHHHHHHHHHHc-CCCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHH
Q 020768          176 RANIGPETNVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKA  250 (321)
Q Consensus       176 ~~~~~~g~~vlI~Gag~vG~~a~qla~~~-g~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~~  250 (321)
                      ...+++|++||=.|+|. |..+.++++.+ +...|++++.++++.+.+++    +|...+.....   |..+....+. .
T Consensus        78 ~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~---D~~~~~~~~~-~  152 (274)
T 3ajd_A           78 VLNPREDDFILDMCAAP-GGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINA---DMRKYKDYLL-K  152 (274)
T ss_dssp             HHCCCTTCEEEETTCTT-CHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES---CHHHHHHHHH-H
T ss_pred             HhCCCCcCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeC---ChHhcchhhh-h
Confidence            34678899988777643 55566677765 43589999999998877653    46543322222   2222111110 0


Q ss_pred             hCCCccEEEE---cCCC---------------------HHHHHHHHHHcccCCEEEEEc
Q 020768          251 MGTGIDVSFD---CAGF---------------------NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       251 ~~~~~d~vid---~~g~---------------------~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      ....+|.|+-   |+|.                     ...+..+.+.|++||+++...
T Consensus       153 ~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~st  211 (274)
T 3ajd_A          153 NEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYST  211 (274)
T ss_dssp             TTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence            1457998885   3331                     346778889999999998764

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=95.88  E-value=0.054  Score=49.23  Aligned_cols=85  Identities=21%  Similarity=0.225  Sum_probs=52.0

Q ss_pred             CCCCCEEEEEcC-ChhHHHH-HHHHHHcCCCeEEEEeCChh----------------HHHHHHHcCCCe-EEecCCCcc-
Q 020768          179 IGPETNVLIMGA-GPIGLVT-MLGARAFGAPRIVIVDVDDY----------------RLSVAKELGADN-IVKVSTNLQ-  238 (321)
Q Consensus       179 ~~~g~~vlI~Ga-g~vG~~a-~qla~~~g~~~vv~v~~~~~----------------~~~~~~~~g~~~-vi~~~~~~~-  238 (321)
                      ...++++||+|+ +++|+++ +.+|...|+ .++++....+                -.+.+++.|... .++.+-.+. 
T Consensus        47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA-~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e  125 (401)
T 4ggo_A           47 AKAPKNVLVLGCSNGYGLASRITAAFGYGA-ATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDE  125 (401)
T ss_dssp             SCCCCEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHH
T ss_pred             cCCCCEEEEECCCCcHHHHHHHHHHhhCCC-CEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHH
Confidence            356789999998 9999875 455556788 4666654321                124566667543 344333333 


Q ss_pred             cHHHHHHHHHHHhCCCccEEEEcCCCH
Q 020768          239 DIAEEVEKIQKAMGTGIDVSFDCAGFN  265 (321)
Q Consensus       239 ~~~~~~~~~~~~~~~~~d~vid~~g~~  265 (321)
                      ...+.+.++.+ ..+++|+++.+.+.+
T Consensus       126 ~i~~vi~~i~~-~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          126 IKAQVIEEAKK-KGIKFDLIVYSLASP  151 (401)
T ss_dssp             HHHHHHHHHHH-TTCCEEEEEECCCCS
T ss_pred             HHHHHHHHHHH-hcCCCCEEEEecccc
Confidence            33333444433 467899999988853

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=95.87  E-value=0.072  Score=48.96  Aligned_cols=98  Identities=16%  Similarity=0.151  Sum_probs=61.0

Q ss_pred             CEEEEEcCChhHHHHHHHHHHcCC--CeEEEEeCChhHHHHH-HHcCC-----CeEEecCCCcccHHHHHHHHHHHhCCC
Q 020768          183 TNVLIMGAGPIGLVTMLGARAFGA--PRIVIVDVDDYRLSVA-KELGA-----DNIVKVSTNLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~g~--~~vv~v~~~~~~~~~~-~~~g~-----~~vi~~~~~~~~~~~~~~~~~~~~~~~  254 (321)
                      .+|+|+|+|++|..+++.+...|.  ..|++++++.++.+.+ ++++.     -..+..+-.  + .+.+.++.+.  .+
T Consensus         2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~--d-~~~l~~~l~~--~~   76 (405)
T 4ina_A            2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDAD--S-IEELVALINE--VK   76 (405)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTT--C-HHHHHHHHHH--HC
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCC--C-HHHHHHHHHh--hC
Confidence            379999999999999998887773  3688888888876644 34431     122222211  1 1223333221  25


Q ss_pred             ccEEEEcCCCHHHHHHHHHHcccCCEEEEEc
Q 020768          255 IDVSFDCAGFNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       255 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      +|+||++++.......+..++..+-.++.++
T Consensus        77 ~DvVin~ag~~~~~~v~~a~l~~g~~vvD~a  107 (405)
T 4ina_A           77 PQIVLNIALPYQDLTIMEACLRTGVPYLDTA  107 (405)
T ss_dssp             CSEEEECSCGGGHHHHHHHHHHHTCCEEESS
T ss_pred             CCEEEECCCcccChHHHHHHHHhCCCEEEec
Confidence            8999999986544445556666666666553

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=95.86  E-value=0.016  Score=52.98  Aligned_cols=90  Identities=20%  Similarity=0.172  Sum_probs=65.9

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      .|.++.|+|.|.+|...++.++.+|. .|++.+++.++.+.++++|+...       .++    .++    -...|+|+.
T Consensus       190 ~gktvGIIGlG~IG~~vA~~l~a~G~-~V~~~d~~~~~~~~~~~~G~~~~-------~~l----~el----l~~aDvV~l  253 (393)
T 2nac_A          190 EAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLTWH-------ATR----EDM----YPVCDVVTL  253 (393)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCEEC-------SSH----HHH----GGGCSEEEE
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEEcCCccchhhHhhcCceec-------CCH----HHH----HhcCCEEEE
Confidence            57899999999999999999999999 68888887766666777776421       111    122    135799999


Q ss_pred             cCCCH-H---HH-HHHHHHcccCCEEEEEcC
Q 020768          261 CAGFN-K---TM-STALSATRAGGKVCLVGM  286 (321)
Q Consensus       261 ~~g~~-~---~~-~~~~~~l~~~G~~v~~g~  286 (321)
                      ++... +   .+ ...+..++++..++.++.
T Consensus       254 ~~Plt~~t~~li~~~~l~~mk~gailIN~aR  284 (393)
T 2nac_A          254 NCPLHPETEHMINDETLKLFKRGAYIVNTAR  284 (393)
T ss_dssp             CSCCCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             ecCCchHHHHHhhHHHHhhCCCCCEEEECCC
Confidence            88742 1   22 456788899888888884

>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*

Probab=95.85  E-value=0.037  Score=48.63  Aligned_cols=98  Identities=17%  Similarity=0.136  Sum_probs=63.4

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcC--------CCeEEecCCCcccHHHHHHHHHHHh
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG--------ADNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g--------~~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      ..+.+||++|+|. |..+..+++..+...+++++.+++..+.+++.-        ...+-...   .|..+.+.    ..
T Consensus        89 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~---~D~~~~l~----~~  160 (296)
T 1inl_A           89 PNPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVI---ANGAEYVR----KF  160 (296)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE---SCHHHHGG----GC
T ss_pred             CCCCEEEEEcCCc-CHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEE---CcHHHHHh----hC
Confidence            3458999998754 566667777666668999999999888877531        11111111   22222221    12


Q ss_pred             CCCccEEEEcCCC-----------HHHHHHHHHHcccCCEEEEEc
Q 020768          252 GTGIDVSFDCAGF-----------NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       252 ~~~~d~vid~~g~-----------~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      ...+|+|+-....           .+.++.+.+.|+++|.++...
T Consensus       161 ~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  205 (296)
T 1inl_A          161 KNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET  205 (296)
T ss_dssp             SSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence            4569999853321           356789999999999999874

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=95.85  E-value=0.017  Score=49.86  Aligned_cols=95  Identities=13%  Similarity=0.138  Sum_probs=57.6

Q ss_pred             EEEEEcC-ChhHHHHHHHHHHc--CCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          184 NVLIMGA-GPIGLVTMLGARAF--GAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       184 ~vlI~Ga-g~vG~~a~qla~~~--g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      +|||+|+ |.+|...++.+...  |. .|+++++++++.+.+...++.. +..+-  .+. +.+.+.    -.++|+||.
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~~~~~~~-~~~D~--~d~-~~~~~~----~~~~d~vi~   71 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPAS-QIVAIVRNPAKAQALAAQGITV-RQADY--GDE-AALTSA----LQGVEKLLL   71 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTCHHHHHTTCEE-EECCT--TCH-HHHHHH----TTTCSEEEE
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCc-eEEEEEcChHhhhhhhcCCCeE-EEcCC--CCH-HHHHHH----HhCCCEEEE
Confidence            4899999 99999999888877  87 5777777776655444445432 22221  121 223332    246899999


Q ss_pred             cCCCH-----HHHHHHHHHcccC--CEEEEEcCC
Q 020768          261 CAGFN-----KTMSTALSATRAG--GKVCLVGMG  287 (321)
Q Consensus       261 ~~g~~-----~~~~~~~~~l~~~--G~~v~~g~~  287 (321)
                      +.+..     .....+++.+...  ++++.+++.
T Consensus        72 ~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~  105 (286)
T 2zcu_A           72 ISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSLL  105 (286)
T ss_dssp             CC--------CHHHHHHHHHHHHTCCEEEEEEET
T ss_pred             eCCCCchHHHHHHHHHHHHHHHcCCCEEEEECCC
Confidence            98742     1234445554432  588888754

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=95.84  E-value=0.03  Score=49.86  Aligned_cols=89  Identities=16%  Similarity=0.074  Sum_probs=64.0

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeC-ChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV-DDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~-~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      .|.+|.|+|.|.+|...++.++.+|. .|++.++ +.++ +.+.++|+..   .    .++.+.+        ...|+|+
T Consensus       145 ~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~~g~~~---~----~~l~ell--------~~aDvVi  207 (320)
T 1gdh_A          145 DNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASS-SDEASYQATF---H----DSLDSLL--------SVSQFFS  207 (320)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCH-HHHHHHTCEE---C----SSHHHHH--------HHCSEEE
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcCh-hhhhhcCcEE---c----CCHHHHH--------hhCCEEE
Confidence            56789999999999999999999998 6888888 7665 3556677632   1    1222222        1369999


Q ss_pred             EcCCCHH----HH-HHHHHHcccCCEEEEEcC
Q 020768          260 DCAGFNK----TM-STALSATRAGGKVCLVGM  286 (321)
Q Consensus       260 d~~g~~~----~~-~~~~~~l~~~G~~v~~g~  286 (321)
                      .++....    .+ ...+..+++++.++.++.
T Consensus       208 l~~p~~~~t~~~i~~~~l~~mk~gailIn~ar  239 (320)
T 1gdh_A          208 LNAPSTPETRYFFNKATIKSLPQGAIVVNTAR  239 (320)
T ss_dssp             ECCCCCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             EeccCchHHHhhcCHHHHhhCCCCcEEEECCC
Confidence            9887532    12 346688999988888885

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=95.83  E-value=0.11  Score=43.42  Aligned_cols=104  Identities=14%  Similarity=0.201  Sum_probs=67.8

Q ss_pred             HcCCCCCCEEEEEcCChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHHHH----cCCC--eEEecCCCcccHHHHHHHHH
Q 020768          176 RANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKE----LGAD--NIVKVSTNLQDIAEEVEKIQ  248 (321)
Q Consensus       176 ~~~~~~g~~vlI~Gag~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~~~----~g~~--~vi~~~~~~~~~~~~~~~~~  248 (321)
                      ..+.+++.+||=+|+|. |..++.+|+.++ ...+++++.+++..+.+++    .|..  .+-...   .+..+.+..+ 
T Consensus        51 ~~~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~---gda~~~l~~~-  125 (221)
T 3dr5_A           51 TTNGNGSTGAIAITPAA-GLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLL---SRPLDVMSRL-  125 (221)
T ss_dssp             HSCCTTCCEEEEESTTH-HHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEEC---SCHHHHGGGS-
T ss_pred             hhCCCCCCCEEEEcCCc-hHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEE---cCHHHHHHHh-
Confidence            34445566999888754 888888998763 2379999999988777653    4544  222221   2222222111 


Q ss_pred             HHhCCCccEEEEcCCC---HHHHHHHHHHcccCCEEEEEcC
Q 020768          249 KAMGTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       249 ~~~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                        ....||+||-....   ...++.+.+.|++||.++.-..
T Consensus       126 --~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~dn~  164 (221)
T 3dr5_A          126 --ANDSYQLVFGQVSPMDLKALVDAAWPLLRRGGALVLADA  164 (221)
T ss_dssp             --CTTCEEEEEECCCTTTHHHHHHHHHHHEEEEEEEEETTT
T ss_pred             --cCCCcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEEeCC
Confidence              14679999875443   2367889999999999998553

>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17

Probab=95.83  E-value=0.055  Score=47.97  Aligned_cols=98  Identities=17%  Similarity=0.184  Sum_probs=64.6

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCC--------CeEEecCCCcccHHHHHHHHHHHh
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA--------DNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~--------~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      ..+.+||++|+|. |..+..+++..+...+++++.+++-.+.+++.-.        ..+-.. .  .|..+.+..    .
T Consensus       107 ~~~~~VLdIG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~-~--~D~~~~l~~----~  178 (314)
T 2b2c_A          107 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLF-C--GDGFEFLKN----H  178 (314)
T ss_dssp             SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEE-C--SCHHHHHHH----C
T ss_pred             CCCCEEEEEcCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEE-E--ChHHHHHHh----c
Confidence            3568999998754 6667777776655589999999999998876321        111111 1  233333322    2


Q ss_pred             CCCccEEEEcCCC----------HHHHHHHHHHcccCCEEEEEc
Q 020768          252 GTGIDVSFDCAGF----------NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       252 ~~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      ...+|+|+-....          .+.++.+.+.|+++|.+++-.
T Consensus       179 ~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~  222 (314)
T 2b2c_A          179 KNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG  222 (314)
T ss_dssp             TTCEEEEEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred             CCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence            4679999965421          356888999999999998865

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=95.82  E-value=0.049  Score=48.78  Aligned_cols=80  Identities=19%  Similarity=0.312  Sum_probs=51.2

Q ss_pred             CCCCEEEEEcC-ChhHHHHHHHHHHc-CCCeEEEEeCChhHHHHHH-HcCCCeEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768          180 GPETNVLIMGA-GPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAK-ELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       180 ~~g~~vlI~Ga-g~vG~~a~qla~~~-g~~~vv~v~~~~~~~~~~~-~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      -.+.+|||+|+ |.+|...++.+... |...|+++++++++.+.+. .+....+..+..+-.+. +.+.++    -.++|
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~-~~l~~~----~~~~D   93 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDL-ERLNYA----LEGVD   93 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCH-HHHHHH----TTTCS
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCH-HHHHHH----HhcCC
Confidence            45789999998 99999999888887 8757888888877765443 34322111111111222 233333    24799


Q ss_pred             EEEEcCCC
Q 020768          257 VSFDCAGF  264 (321)
Q Consensus       257 ~vid~~g~  264 (321)
                      +||.+++-
T Consensus        94 ~Vih~Aa~  101 (344)
T 2gn4_A           94 ICIHAAAL  101 (344)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=95.82  E-value=0.03  Score=46.60  Aligned_cols=105  Identities=18%  Similarity=0.206  Sum_probs=68.6

Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHHHH----cCCCe-EEecCCCcccHHHHHHHHHHHh
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKE----LGADN-IVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~~~----~g~~~-vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      ...++.+||=+|+|. |..++.+++.++ ...+++++.+++..+.+++    .|... +-...   .+..+.+..+....
T Consensus        61 ~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~~~~~~~~~  136 (225)
T 3tr6_A           61 KLMQAKKVIDIGTFT-GYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRL---SPAKDTLAELIHAG  136 (225)
T ss_dssp             HHHTCSEEEEECCTT-SHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE---SCHHHHHHHHHTTT
T ss_pred             HhhCCCEEEEeCCcc-hHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe---CCHHHHHHHhhhcc
Confidence            345678999999865 788888888764 4489999999988777654    35442 22111   23333333322100


Q ss_pred             -CCCccEEEEcCCC---HHHHHHHHHHcccCCEEEEEcC
Q 020768          252 -GTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       252 -~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                       ...+|+|+-....   ...++.+.+.|++||.++.-..
T Consensus       137 ~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~  175 (225)
T 3tr6_A          137 QAWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVDNV  175 (225)
T ss_dssp             CTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred             CCCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence             1579999954442   2457888899999999988653

>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*

Probab=95.81  E-value=0.044  Score=48.37  Aligned_cols=100  Identities=19%  Similarity=0.211  Sum_probs=65.1

Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcC--------CCeEEecCCCcccHHHHHHHHHH
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG--------ADNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g--------~~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      ....+.+||++|+|. |..+..+++..+...+++++.+++-.+.+++.-        ...+-...   .|..+.+..   
T Consensus        92 ~~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~---~Da~~~l~~---  164 (304)
T 2o07_A           92 SHPNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHV---GDGFEFMKQ---  164 (304)
T ss_dssp             TSSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE---SCHHHHHHT---
T ss_pred             hCCCCCEEEEECCCc-hHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEE---CcHHHHHhh---
Confidence            345678999998753 666677777655558999999999888887531        11111111   232222221   


Q ss_pred             HhCCCccEEEEcCCC----------HHHHHHHHHHcccCCEEEEEc
Q 020768          250 AMGTGIDVSFDCAGF----------NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       250 ~~~~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~g  285 (321)
                       ....+|+|+-....          .+.++.+.+.|+++|.+++-.
T Consensus       165 -~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  209 (304)
T 2o07_A          165 -NQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG  209 (304)
T ss_dssp             -CSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred             -CCCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence             24679999953332          246889999999999998765

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*

Probab=95.80  E-value=0.033  Score=48.34  Aligned_cols=84  Identities=12%  Similarity=0.027  Sum_probs=56.1

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCC
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  263 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  263 (321)
                      +|.|+|+|.+|...+..+.. |. .|.+.++++++.+.+.+.|.... .    ..+       .    -...|+||.|+.
T Consensus         3 ~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~~~~~~~~~~~~g~~~~-~----~~~-------~----~~~~D~vi~~v~   64 (289)
T 2cvz_A            3 KVAFIGLGAMGYPMAGHLAR-RF-PTLVWNRTFEKALRHQEEFGSEA-V----PLE-------R----VAEARVIFTCLP   64 (289)
T ss_dssp             CEEEECCSTTHHHHHHHHHT-TS-CEEEECSSTHHHHHHHHHHCCEE-C----CGG-------G----GGGCSEEEECCS
T ss_pred             eEEEEcccHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHHCCCccc-C----HHH-------H----HhCCCEEEEeCC
Confidence            68899999999988877777 98 58888888888777766565421 1    111       0    124799999998


Q ss_pred             CHHHHHHHH----HHcccCCEEEEEc
Q 020768          264 FNKTMSTAL----SATRAGGKVCLVG  285 (321)
Q Consensus       264 ~~~~~~~~~----~~l~~~G~~v~~g  285 (321)
                      .+......+    ..++++..++.++
T Consensus        65 ~~~~~~~v~~~l~~~l~~~~~vv~~s   90 (289)
T 2cvz_A           65 TTREVYEVAEALYPYLREGTYWVDAT   90 (289)
T ss_dssp             SHHHHHHHHHHHTTTCCTTEEEEECS
T ss_pred             ChHHHHHHHHHHHhhCCCCCEEEECC
Confidence            765455444    3445555555554

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=95.79  E-value=0.06  Score=46.86  Aligned_cols=98  Identities=18%  Similarity=0.254  Sum_probs=66.6

Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCC-eEEecCCCcccHHHHHHHHHHHhC
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGAD-NIVKVSTNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~-~vi~~~~~~~~~~~~~~~~~~~~~  252 (321)
                      .+.++.+||-+|+| .|..+..+++..|. .+++++.+++..+.+++    .|.. .+-....+..+.        ....
T Consensus        79 ~~~~~~~vLDiGcG-~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--------~~~~  148 (297)
T 2o57_A           79 VLQRQAKGLDLGAG-YGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEI--------PCED  148 (297)
T ss_dssp             CCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSC--------SSCT
T ss_pred             CCCCCCEEEEeCCC-CCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccC--------CCCC
Confidence            78899999999986 47778888888787 79999999987776654    3432 111111111110        0013


Q ss_pred             CCccEEEEcCCC------HHHHHHHHHHcccCCEEEEEc
Q 020768          253 TGIDVSFDCAGF------NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       253 ~~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      ..+|+|+....-      ...+..+.+.|+++|++++..
T Consensus       149 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~  187 (297)
T 2o57_A          149 NSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITD  187 (297)
T ss_dssp             TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEE
Confidence            568999974331      356889999999999998875

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=95.78  E-value=0.072  Score=46.35  Aligned_cols=87  Identities=13%  Similarity=0.086  Sum_probs=60.7

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCC
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  263 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  263 (321)
                      +|.|+|+|.+|...++.+...|. .|.+.++++++.+.+.+.|+...       .+..+.+.        ..|+||.|+.
T Consensus         3 ~I~iiG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~~~~~~~--------~advvi~~v~   66 (287)
T 3pdu_A            3 TYGFLGLGIMGGPMAANLVRAGF-DVTVWNRNPAKCAPLVALGARQA-------SSPAEVCA--------ACDITIAMLA   66 (287)
T ss_dssp             CEEEECCSTTHHHHHHHHHHHTC-CEEEECSSGGGGHHHHHHTCEEC-------SCHHHHHH--------HCSEEEECCS
T ss_pred             eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec-------CCHHHHHH--------cCCEEEEEcC
Confidence            68899999999988888888898 58888999999888877775321       12222221        3689999998


Q ss_pred             CHHHHHHHH-------HHcccCCEEEEEcC
Q 020768          264 FNKTMSTAL-------SATRAGGKVCLVGM  286 (321)
Q Consensus       264 ~~~~~~~~~-------~~l~~~G~~v~~g~  286 (321)
                      .+..+...+       ..++++..++..+.
T Consensus        67 ~~~~~~~v~~~~~~l~~~l~~g~~vv~~st   96 (287)
T 3pdu_A           67 DPAAAREVCFGANGVLEGIGGGRGYIDMST   96 (287)
T ss_dssp             SHHHHHHHHHSTTCGGGTCCTTCEEEECSC
T ss_pred             CHHHHHHHHcCchhhhhcccCCCEEEECCC
Confidence            764555444       34556666666554

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=95.75  E-value=0.045  Score=50.40  Aligned_cols=87  Identities=23%  Similarity=0.218  Sum_probs=54.8

Q ss_pred             cCC-CCCCEEEEEcC-ChhHHHHHHHHHH-cCCCeEEEEeCChhH----------------HHHHHHcCCCeE-EecCC-
Q 020768          177 ANI-GPETNVLIMGA-GPIGLVTMLGARA-FGAPRIVIVDVDDYR----------------LSVAKELGADNI-VKVST-  235 (321)
Q Consensus       177 ~~~-~~g~~vlI~Ga-g~vG~~a~qla~~-~g~~~vv~v~~~~~~----------------~~~~~~~g~~~v-i~~~~-  235 (321)
                      ..+ +.++++||+|+ +++|.+.+..+.. .|+ .|++++++.++                .+.+++.|.... +..+- 
T Consensus        55 ~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA-~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvt  133 (422)
T 3s8m_A           55 GVRNDGPKKVLVIGASSGYGLASRITAAFGFGA-DTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAF  133 (422)
T ss_dssp             CCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred             cccccCCCEEEEECCChHHHHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCC
Confidence            455 45778899998 9999988888888 999 57777655332                144566675432 22222 


Q ss_pred             CcccHHHHHHHHHHHhCCCccEEEEcCCC
Q 020768          236 NLQDIAEEVEKIQKAMGTGIDVSFDCAGF  264 (321)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~  264 (321)
                      +.++..+.+..+.+..++++|+++++.|.
T Consensus       134 d~~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          134 SDAARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             SHHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            22333334444444332689999999875

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=95.73  E-value=0.063  Score=46.00  Aligned_cols=102  Identities=16%  Similarity=0.202  Sum_probs=68.6

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHc----CCC-eEEecCCCcccHHHHHHHHH
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL----GAD-NIVKVSTNLQDIAEEVEKIQ  248 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~----g~~-~vi~~~~~~~~~~~~~~~~~  248 (321)
                      ++...++++.+||-+|+|. |..+..+++..+. .+++++.+++..+.+++.    |.. .+.....+..+.        
T Consensus        54 ~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--------  123 (273)
T 3bus_A           54 IALLDVRSGDRVLDVGCGI-GKPAVRLATARDV-RVTGISISRPQVNQANARATAAGLANRVTFSYADAMDL--------  123 (273)
T ss_dssp             HHHSCCCTTCEEEEESCTT-SHHHHHHHHHSCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC--------
T ss_pred             HHhcCCCCCCEEEEeCCCC-CHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccC--------
Confidence            4667888999999999865 7778888888777 799999999887776542    432 111111111110        


Q ss_pred             HHhCCCccEEEEcC-----CC-HHHHHHHHHHcccCCEEEEEc
Q 020768          249 KAMGTGIDVSFDCA-----GF-NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       249 ~~~~~~~d~vid~~-----g~-~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      ......+|+|+...     .. ...+..+.+.|+++|++++..
T Consensus       124 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~  166 (273)
T 3bus_A          124 PFEDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIAD  166 (273)
T ss_dssp             CSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             CCCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEE
Confidence            00135689998532     22 356788899999999998775

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=95.73  E-value=0.088  Score=45.01  Aligned_cols=34  Identities=32%  Similarity=0.514  Sum_probs=29.8

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~  215 (321)
                      +.+|+|+|+|++|..++..+...|...+..+|.+
T Consensus        28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d   61 (251)
T 1zud_1           28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD   61 (251)
T ss_dssp             TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred             cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4799999999999999999999999888887654

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=95.73  E-value=0.018  Score=48.54  Aligned_cols=99  Identities=18%  Similarity=0.275  Sum_probs=57.0

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCC-eEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAP-RIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~-~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      +.++||+|+ |++|...++.+...|.. .|+++++++++.+....-++. .+..+-.  +. +.+.++    -.++|++|
T Consensus        18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~-~~~~D~~--d~-~~~~~~----~~~~d~vi   89 (242)
T 2bka_A           18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVN-QEVVDFE--KL-DDYASA----FQGHDVGF   89 (242)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCE-EEECCGG--GG-GGGGGG----GSSCSEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCce-EEecCcC--CH-HHHHHH----hcCCCEEE
Confidence            678999998 99999999988888872 467777765543221111221 2221111  11 112121    13799999


Q ss_pred             EcCCCHH--------------HHHHHHHHcccC--CEEEEEcCCC
Q 020768          260 DCAGFNK--------------TMSTALSATRAG--GKVCLVGMGH  288 (321)
Q Consensus       260 d~~g~~~--------------~~~~~~~~l~~~--G~~v~~g~~~  288 (321)
                      .+.|...              ....+++.+...  ++++.+++..
T Consensus        90 ~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~  134 (242)
T 2bka_A           90 CCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKG  134 (242)
T ss_dssp             ECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             ECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCc
Confidence            9998632              122334444333  6899998653

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=95.73  E-value=0.11  Score=44.85  Aligned_cols=86  Identities=17%  Similarity=0.164  Sum_probs=58.6

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCC
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  263 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  263 (321)
                      +|.|+|+|.+|...+..+...|. .|++.++++++.+.+.+.|......  .   +..    +    . ...|+||.|+.
T Consensus         2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~--~---~~~----~----~-~~~D~vi~av~   66 (279)
T 2f1k_A            2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAG--Q---DLS----L----L-QTAKIIFLCTP   66 (279)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEE--S---CGG----G----G-TTCSEEEECSC
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhCCCCcccc--C---CHH----H----h-CCCCEEEEECC
Confidence            68899999999999998888898 6888899999888888877642111  1   110    1    1 35799999988


Q ss_pred             CHHHHHHHH----HHcccCCEEEEEc
Q 020768          264 FNKTMSTAL----SATRAGGKVCLVG  285 (321)
Q Consensus       264 ~~~~~~~~~----~~l~~~G~~v~~g  285 (321)
                      .+ .....+    ..++++..++.++
T Consensus        67 ~~-~~~~~~~~l~~~~~~~~~vv~~~   91 (279)
T 2f1k_A           67 IQ-LILPTLEKLIPHLSPTAIVTDVA   91 (279)
T ss_dssp             HH-HHHHHHHHHGGGSCTTCEEEECC
T ss_pred             HH-HHHHHHHHHHhhCCCCCEEEECC
Confidence            53 333333    3345566666654

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=95.72  E-value=0.077  Score=47.04  Aligned_cols=80  Identities=23%  Similarity=0.275  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeC---------ChhHHHH----HHHcCCCeEEecCCCcccHHHHHHH
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV---------DDYRLSV----AKELGADNIVKVSTNLQDIAEEVEK  246 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~---------~~~~~~~----~~~~g~~~vi~~~~~~~~~~~~~~~  246 (321)
                      .|.++||+|+ |++|...++.+...|+ .|++++.         +.++.+.    +++.+...+.++.+ ..+..+.+.+
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga-~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~-~~~~~~~~~~   85 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDS-VEAGEKLVKT   85 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCC-GGGHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCC-HHHHHHHHHH
Confidence            4788999998 9999999999999999 5776543         3444322    23334433445433 2344444444


Q ss_pred             HHHHhCCCccEEEEcCC
Q 020768          247 IQKAMGTGIDVSFDCAG  263 (321)
Q Consensus       247 ~~~~~~~~~d~vid~~g  263 (321)
                      +.+. .+++|++|++.|
T Consensus        86 ~~~~-~g~iD~lVnnAG  101 (319)
T 1gz6_A           86 ALDT-FGRIDVVVNNAG  101 (319)
T ss_dssp             HHHH-TSCCCEEEECCC
T ss_pred             HHHH-cCCCCEEEECCC
Confidence            4332 457999999988

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=95.70  E-value=0.083  Score=45.95  Aligned_cols=96  Identities=17%  Similarity=0.154  Sum_probs=58.2

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcC-CCeEEEEeCChhHH--HHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccE
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFG-APRIVIVDVDDYRL--SVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g-~~~vv~v~~~~~~~--~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      ..+|||+|+ |.+|...++.+...| . .|+++++++++.  +.+...++.. +..+-  .+ .+.+.+..    .++|+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~-~V~~~~R~~~~~~~~~l~~~~~~~-~~~D~--~d-~~~l~~~~----~~~d~   75 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTF-KVRVVTRNPRKKAAKELRLQGAEV-VQGDQ--DD-QVIMELAL----NGAYA   75 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSS-EEEEEESCTTSHHHHHHHHTTCEE-EECCT--TC-HHHHHHHH----TTCSE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCc-eEEEEEcCCCCHHHHHHHHCCCEE-EEecC--CC-HHHHHHHH----hcCCE
Confidence            468999999 999999998888878 7 688887776553  2333445443 22221  12 22333332    36999


Q ss_pred             EEEcCCCHH---------HHHHHHHHcccC--CEEEEEcC
Q 020768          258 SFDCAGFNK---------TMSTALSATRAG--GKVCLVGM  286 (321)
Q Consensus       258 vid~~g~~~---------~~~~~~~~l~~~--G~~v~~g~  286 (321)
                      ||.+.+...         ....+++.++..  ++++..+.
T Consensus        76 vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~  115 (299)
T 2wm3_A           76 TFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGL  115 (299)
T ss_dssp             EEECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred             EEEeCCCCccccchHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence            999987321         123444544432  57877554

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=95.70  E-value=0.017  Score=49.67  Aligned_cols=78  Identities=19%  Similarity=0.082  Sum_probs=49.3

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCC-CcccHHHHHHHHHHHhCCCccEE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~-~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      .++++||+|+ |++|...+..+...|+ .|++++++.++.+..   .+ ..+..+- +..+..+.+.++.+. .+++|++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~---~~-~~~~~Dv~d~~~v~~~~~~~~~~-~g~iD~l  100 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNY-RVVATSRSIKPSADP---DI-HTVAGDISKPETADRIVREGIER-FGRIDSL  100 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCCCCSST---TE-EEEESCTTSHHHHHHHHHHHHHH-HSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccC---ce-EEEEccCCCHHHHHHHHHHHHHH-CCCCCEE
Confidence            4689999998 9999999999989999 688887775542211   11 1122221 222333334443332 3479999


Q ss_pred             EEcCCC
Q 020768          259 FDCAGF  264 (321)
Q Consensus       259 id~~g~  264 (321)
                      |.+.|.
T Consensus       101 v~nAg~  106 (260)
T 3un1_A          101 VNNAGV  106 (260)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999874

>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*

Probab=95.70  E-value=0.089  Score=47.25  Aligned_cols=89  Identities=16%  Similarity=0.178  Sum_probs=61.2

Q ss_pred             CEEEEEcCChhHHHHHHHHHHc--CCCeEEEEeCChhHHH-HHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          183 TNVLIMGAGPIGLVTMLGARAF--GAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~--g~~~vv~v~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      -+|.|+|+|.+|...+..++..  +.+.+.+++.++++.+ +++++|+ ...      .++.+.+.      ...+|+|+
T Consensus        14 ~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~-~~~------~~~~~ll~------~~~~D~V~   80 (354)
T 3q2i_A           14 IRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGA-RGH------ASLTDMLA------QTDADIVI   80 (354)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCC-EEE------SCHHHHHH------HCCCSEEE
T ss_pred             ceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCC-cee------CCHHHHhc------CCCCCEEE
Confidence            3789999999998877777766  6644556777877755 4567786 222      13333222      25799999


Q ss_pred             EcCCCHHHHHHHHHHcccCCEEEEEc
Q 020768          260 DCAGFNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       260 d~~g~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      .|+....+.+.+..++..|-. +++.
T Consensus        81 i~tp~~~h~~~~~~al~~gk~-v~~E  105 (354)
T 3q2i_A           81 LTTPSGLHPTQSIECSEAGFH-VMTE  105 (354)
T ss_dssp             ECSCGGGHHHHHHHHHHTTCE-EEEC
T ss_pred             ECCCcHHHHHHHHHHHHCCCC-EEEe
Confidence            999988888888888877644 4454

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=95.70  E-value=0.02  Score=51.20  Aligned_cols=89  Identities=18%  Similarity=0.228  Sum_probs=65.1

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      .|.+|.|+|.|.+|...++.++.+|+ .|++.+++.++.+.+.++|+..        .++.+.+.        ..|+|+.
T Consensus       144 ~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~--------~~l~ell~--------~aDvV~l  206 (330)
T 4e5n_A          144 DNATVGFLGMGAIGLAMADRLQGWGA-TLQYHEAKALDTQTEQRLGLRQ--------VACSELFA--------SSDFILL  206 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHTTTSCC-EEEEECSSCCCHHHHHHHTEEE--------CCHHHHHH--------HCSEEEE
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCCCcHhHHHhcCcee--------CCHHHHHh--------hCCEEEE
Confidence            46799999999999999999999999 6888888875666666777521        12222221        3689999


Q ss_pred             cCCCH-H---HH-HHHHHHcccCCEEEEEcC
Q 020768          261 CAGFN-K---TM-STALSATRAGGKVCLVGM  286 (321)
Q Consensus       261 ~~g~~-~---~~-~~~~~~l~~~G~~v~~g~  286 (321)
                      ++... +   .+ ...+..++++..++.++-
T Consensus       207 ~~P~t~~t~~li~~~~l~~mk~gailIN~ar  237 (330)
T 4e5n_A          207 ALPLNADTLHLVNAELLALVRPGALLVNPCR  237 (330)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             cCCCCHHHHHHhCHHHHhhCCCCcEEEECCC
Confidence            88742 1   12 367788999999988884

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=95.70  E-value=0.068  Score=45.50  Aligned_cols=82  Identities=18%  Similarity=0.272  Sum_probs=50.0

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHH-HHHH----HcCCCe-EEecCC-CcccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRL-SVAK----ELGADN-IVKVST-NLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~-~~~~----~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~  252 (321)
                      .+.++||+|+ |++|...+..+...|+ .|++++++.++. +.++    +.+... .+..+- +.++..+.+.++... .
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~   90 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD-L   90 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHh-c
Confidence            3678999998 9999999998888998 677777754332 2222    234332 222221 122333334443322 3


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      +.+|++|.+.|.
T Consensus        91 ~~id~li~~Ag~  102 (265)
T 1h5q_A           91 GPISGLIANAGV  102 (265)
T ss_dssp             CSEEEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            579999999874

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=95.69  E-value=0.067  Score=44.94  Aligned_cols=74  Identities=18%  Similarity=0.070  Sum_probs=48.0

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHc--CCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAF--GAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~--g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      .+.+|||+|+ |.+|...++.+...  |. .|+++++++++.+.+ .-++. .+..+-  .+ .+.+.++.    .++|+
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~-~V~~~~r~~~~~~~~-~~~~~-~~~~D~--~d-~~~~~~~~----~~~d~   72 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQGKEKI-GGEAD-VFIGDI--TD-ADSINPAF----QGIDA   72 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTC-EEEEEESCHHHHHHT-TCCTT-EEECCT--TS-HHHHHHHH----TTCSE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCc-EEEEEEcCCCchhhc-CCCee-EEEecC--CC-HHHHHHHH----cCCCE
Confidence            4678999998 99999999988888  67 688888887665433 11222 222221  12 22333332    36899


Q ss_pred             EEEcCCC
Q 020768          258 SFDCAGF  264 (321)
Q Consensus       258 vid~~g~  264 (321)
                      ||.+.|.
T Consensus        73 vi~~a~~   79 (253)
T 1xq6_A           73 LVILTSA   79 (253)
T ss_dssp             EEECCCC
T ss_pred             EEEeccc
Confidence            9998873

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=95.68  E-value=0.12  Score=44.60  Aligned_cols=92  Identities=23%  Similarity=0.149  Sum_probs=62.7

Q ss_pred             CEEEEEcCChhHHHHHHHHHHcCCC-eEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCC-CccEEEE
Q 020768          183 TNVLIMGAGPIGLVTMLGARAFGAP-RIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFD  260 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~g~~-~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~-~~d~vid  260 (321)
                      .+|.|+|+|.+|...++.++..|.. .|++.++++++.+.++++|......  .   +..+.        -. ..|+||.
T Consensus         2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~--~---~~~~~--------~~~~aDvVil   68 (281)
T 2g5c_A            2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGT--T---SIAKV--------EDFSPDFVML   68 (281)
T ss_dssp             CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEE--S---CGGGG--------GGTCCSEEEE
T ss_pred             cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCccccc--C---CHHHH--------hcCCCCEEEE
Confidence            3689999999999999998888862 5888999999988888888642111  1   11110        13 6899999


Q ss_pred             cCCCHHHH---HHHHHHcccCCEEEEEcCC
Q 020768          261 CAGFNKTM---STALSATRAGGKVCLVGMG  287 (321)
Q Consensus       261 ~~g~~~~~---~~~~~~l~~~G~~v~~g~~  287 (321)
                      |+..+...   ..+...++++..++.++..
T Consensus        69 avp~~~~~~v~~~l~~~l~~~~iv~~~~~~   98 (281)
T 2g5c_A           69 SSPVRTFREIAKKLSYILSEDATVTDQGSV   98 (281)
T ss_dssp             CSCHHHHHHHHHHHHHHSCTTCEEEECCSC
T ss_pred             cCCHHHHHHHHHHHHhhCCCCcEEEECCCC
Confidence            99865332   2333456777766666543

>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}

Probab=95.67  E-value=0.06  Score=50.21  Aligned_cols=105  Identities=20%  Similarity=0.252  Sum_probs=68.6

Q ss_pred             HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHH
Q 020768          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      ....+++|++||=.|+|+ |..+.++++.++. ..+++++.++++.+.+++    +|...+.....+..++..   .+  
T Consensus       253 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~---~~--  326 (450)
T 2yxl_A          253 IVLDPKPGETVVDLAAAP-GGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPE---II--  326 (450)
T ss_dssp             HHHCCCTTCEEEESSCTT-CHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSS---SS--
T ss_pred             HhcCCCCcCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcch---hh--
Confidence            445788999999888765 6667777877643 479999999998877653    476443322222111100   00  


Q ss_pred             HhCCCccEEEE---cCCC-------------------------HHHHHHHHHHcccCCEEEEEcC
Q 020768          250 AMGTGIDVSFD---CAGF-------------------------NKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       250 ~~~~~~d~vid---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                       .+..||.|+-   |+|.                         ...+..+.+.|++||+++....
T Consensus       327 -~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tc  390 (450)
T 2yxl_A          327 -GEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTC  390 (450)
T ss_dssp             -CSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEES
T ss_pred             -ccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence             1246899986   4443                         2467888999999999987653

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=95.67  E-value=0.16  Score=42.09  Aligned_cols=76  Identities=16%  Similarity=0.077  Sum_probs=53.9

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-HcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcC
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  262 (321)
                      +|+|.|+|.+|...++.+...|. .|++++.++++.+.+. .++... +.-+..  + .+.+.+   .+-..+|+++-++
T Consensus         2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~~~~~~-i~gd~~--~-~~~l~~---a~i~~ad~vi~~~   73 (218)
T 3l4b_C            2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKKLKATI-IHGDGS--H-KEILRD---AEVSKNDVVVILT   73 (218)
T ss_dssp             CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHHSSSEE-EESCTT--S-HHHHHH---HTCCTTCEEEECC
T ss_pred             EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHcCCeE-EEcCCC--C-HHHHHh---cCcccCCEEEEec
Confidence            58899999999999999999998 5888999999887654 466543 332221  1 222322   2345799999999


Q ss_pred             CCHHH
Q 020768          263 GFNKT  267 (321)
Q Consensus       263 g~~~~  267 (321)
                      +.+..
T Consensus        74 ~~d~~   78 (218)
T 3l4b_C           74 PRDEV   78 (218)
T ss_dssp             SCHHH
T ss_pred             CCcHH
Confidence            98643

>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*

Probab=95.65  E-value=0.12  Score=45.35  Aligned_cols=101  Identities=20%  Similarity=0.106  Sum_probs=65.7

Q ss_pred             CCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcC--------CCeEEecCCCcccHHHHHHHHHHH
Q 020768          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG--------ADNIVKVSTNLQDIAEEVEKIQKA  250 (321)
Q Consensus       179 ~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g--------~~~vi~~~~~~~~~~~~~~~~~~~  250 (321)
                      ..++.+||++|+|. |..+..+++..+...+++++.+++-.+.+++.-        ...+-...   .|..+.+..   .
T Consensus        93 ~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~---~D~~~~~~~---~  165 (304)
T 3bwc_A           93 HPKPERVLIIGGGD-GGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRV---GDGLAFVRQ---T  165 (304)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE---SCHHHHHHS---S
T ss_pred             CCCCCeEEEEcCCC-CHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEE---CcHHHHHHh---c
Confidence            46678999998754 666677777655558999999998888887532        11111111   232222211   0


Q ss_pred             hCCCccEEEEcCCC----------HHHHHHHHHHcccCCEEEEEcC
Q 020768          251 MGTGIDVSFDCAGF----------NKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       251 ~~~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      ....+|+|+-....          .+.++.+.+.|+++|.+++...
T Consensus       166 ~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~  211 (304)
T 3bwc_A          166 PDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGE  211 (304)
T ss_dssp             CTTCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             cCCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence            24579999964421          3568899999999999998753

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=95.64  E-value=0.12  Score=40.17  Aligned_cols=97  Identities=12%  Similarity=0.158  Sum_probs=59.3

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC-hhHHHHHHH-c--CCCeEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD-DYRLSVAKE-L--GADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~-~~~~~~~~~-~--g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      ..++++|.|+|.+|...++.+...|. .|++++.+ +++.+.+++ +  |.. ++.-+.  .+ .+.+.+   .+-.++|
T Consensus         2 ~~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~~~~~-~i~gd~--~~-~~~l~~---a~i~~ad   73 (153)
T 1id1_A            2 RKDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNAD-VIPGDS--ND-SSVLKK---AGIDRCR   73 (153)
T ss_dssp             CCSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCE-EEESCT--TS-HHHHHH---HTTTTCS
T ss_pred             CCCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhcCCCe-EEEcCC--CC-HHHHHH---cChhhCC
Confidence            35689999999999999999999998 57778886 455544432 2  333 333221  11 222322   2235799


Q ss_pred             EEEEcCCCHHHHHH---HHHHcccCCEEEEEc
Q 020768          257 VSFDCAGFNKTMST---ALSATRAGGKVCLVG  285 (321)
Q Consensus       257 ~vid~~g~~~~~~~---~~~~l~~~G~~v~~g  285 (321)
                      +|+-+++++..-..   ..+.+.+..+++...
T Consensus        74 ~vi~~~~~d~~n~~~~~~a~~~~~~~~ii~~~  105 (153)
T 1id1_A           74 AILALSDNDADNAFVVLSAKDMSSDVKTVLAV  105 (153)
T ss_dssp             EEEECSSCHHHHHHHHHHHHHHTSSSCEEEEC
T ss_pred             EEEEecCChHHHHHHHHHHHHHCCCCEEEEEE
Confidence            99999997543222   233444555666544

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=95.64  E-value=0.11  Score=50.33  Aligned_cols=104  Identities=20%  Similarity=0.214  Sum_probs=64.7

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCCh---------hHHH----HHHHcCCCeEEecCCCcccHHHHHHH
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD---------YRLS----VAKELGADNIVKVSTNLQDIAEEVEK  246 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~---------~~~~----~~~~~g~~~vi~~~~~~~~~~~~~~~  246 (321)
                      .|+++||+|+ +++|...+..+...|+ +|++.+.+.         ++.+    .+++.|...+.+..+ ..+..+.+.+
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga-~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d-~~~~~~~v~~   84 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGA-KVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNN-VLDGDKIVET   84 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECC-----------CHHHHHHHHHHHTTCEEEEECCC-TTCHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCC-HHHHHHHHHH
Confidence            4678999998 9999999999999999 577765543         2322    223345444444433 2333444444


Q ss_pred             HHHHhCCCccEEEEcCCCH-------------------------HHHHHHHHHcc--cCCEEEEEcCC
Q 020768          247 IQKAMGTGIDVSFDCAGFN-------------------------KTMSTALSATR--AGGKVCLVGMG  287 (321)
Q Consensus       247 ~~~~~~~~~d~vid~~g~~-------------------------~~~~~~~~~l~--~~G~~v~~g~~  287 (321)
                      ..+. .+.+|++|++.|-.                         ...+.++..++  .+|+|+.+++.
T Consensus        85 ~~~~-~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~  151 (604)
T 2et6_A           85 AVKN-FGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSP  151 (604)
T ss_dssp             HHHH-HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCH
T ss_pred             HHHH-cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCH
Confidence            4332 35799999999842                         12445555553  35899999853

>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}

Probab=95.63  E-value=0.066  Score=44.46  Aligned_cols=95  Identities=14%  Similarity=0.233  Sum_probs=64.5

Q ss_pred             CCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCC-----------eEEecCCCcccHHHHHHHH
Q 020768          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD-----------NIVKVSTNLQDIAEEVEKI  247 (321)
Q Consensus       179 ~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~-----------~vi~~~~~~~~~~~~~~~~  247 (321)
                      ++++.+||-+|+|. |..+..+++. +. .+++++.+++..+.+++.-..           .++..+  ..++       
T Consensus        28 ~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d--~~~~-------   95 (235)
T 3sm3_A           28 LQEDDEILDIGCGS-GKISLELASK-GY-SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVEN--ASSL-------   95 (235)
T ss_dssp             CCTTCEEEEETCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECC--TTSC-------
T ss_pred             CCCCCeEEEECCCC-CHHHHHHHhC-CC-eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEec--cccc-------
Confidence            46889999999865 7777777776 76 799999999998888763321           111111  1110       


Q ss_pred             HHHhCCCccEEEEcCC-----CH----HHHHHHHHHcccCCEEEEEcC
Q 020768          248 QKAMGTGIDVSFDCAG-----FN----KTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       248 ~~~~~~~~d~vid~~g-----~~----~~~~~~~~~l~~~G~~v~~g~  286 (321)
                       ......+|+|+-...     ..    ..++.+.+.|+++|++++...
T Consensus        96 -~~~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  142 (235)
T 3sm3_A           96 -SFHDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEF  142 (235)
T ss_dssp             -CSCTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             -CCCCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence             001356899986321     22    478889999999999998753

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=95.62  E-value=0.052  Score=48.46  Aligned_cols=89  Identities=16%  Similarity=0.172  Sum_probs=61.6

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      .|.+|.|+|.|.+|...++.++.+|. .|++.+++.++.+.+.++|....        ++.+.+        ...|+|+.
T Consensus       154 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~--------~l~e~l--------~~aDvVi~  216 (330)
T 2gcg_A          154 TQSTVGIIGLGRIGQAIARRLKPFGV-QRFLYTGRQPRPEEAAEFQAEFV--------STPELA--------AQSDFIVV  216 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-CEEEEESSSCCHHHHHTTTCEEC--------CHHHHH--------HHCSEEEE
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcchhHHHhcCceeC--------CHHHHH--------hhCCEEEE
Confidence            36789999999999999999999999 58888877766555666654321        122222        13689999


Q ss_pred             cCCCHH----HH-HHHHHHcccCCEEEEEcC
Q 020768          261 CAGFNK----TM-STALSATRAGGKVCLVGM  286 (321)
Q Consensus       261 ~~g~~~----~~-~~~~~~l~~~G~~v~~g~  286 (321)
                      ++....    .+ ...+..++++..++.++.
T Consensus       217 ~vp~~~~t~~~i~~~~~~~mk~gailIn~sr  247 (330)
T 2gcg_A          217 ACSLTPATEGLCNKDFFQKMKETAVFINISR  247 (330)
T ss_dssp             CCCCCTTTTTCBSHHHHHHSCTTCEEEECSC
T ss_pred             eCCCChHHHHhhCHHHHhcCCCCcEEEECCC
Confidence            887531    12 356677888887777663

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=95.62  E-value=0.059  Score=45.98  Aligned_cols=82  Identities=11%  Similarity=0.131  Sum_probs=49.5

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHH---cCCCeEEEEeCChhHHHHH-HHc-----CCC-eEEecCCC-cccHHHHHHHHH
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARA---FGAPRIVIVDVDDYRLSVA-KEL-----GAD-NIVKVSTN-LQDIAEEVEKIQ  248 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~---~g~~~vv~v~~~~~~~~~~-~~~-----g~~-~vi~~~~~-~~~~~~~~~~~~  248 (321)
                      .+.++||+|+ +++|...+..+..   .|+ .|++++++.++.+.+ +++     +.. ..+..+-. .++..+.+.++.
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR   83 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCC-eEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHH
Confidence            3578899998 9999988888777   798 688888887765543 232     322 12222211 223333333332


Q ss_pred             HH-hCCCcc--EEEEcCC
Q 020768          249 KA-MGTGID--VSFDCAG  263 (321)
Q Consensus       249 ~~-~~~~~d--~vid~~g  263 (321)
                      +. ..+.+|  ++|++.|
T Consensus        84 ~~~~~g~~d~~~lvnnAg  101 (259)
T 1oaa_A           84 ELPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             HSCCCTTCCEEEEEECCC
T ss_pred             hccccccCCccEEEECCc
Confidence            20 224678  9999887

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=95.61  E-value=0.051  Score=48.17  Aligned_cols=83  Identities=24%  Similarity=0.330  Sum_probs=50.8

Q ss_pred             CCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCC----------hhHHH----HHHHcCCCeEE-ecCC-CcccHHH
Q 020768          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD----------DYRLS----VAKELGADNIV-KVST-NLQDIAE  242 (321)
Q Consensus       180 ~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~----------~~~~~----~~~~~g~~~vi-~~~~-~~~~~~~  242 (321)
                      -.|+++||+|+ +++|...+..+...|+ .|++++++          .++.+    .+++.+..... ..+- +..+..+
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  103 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAG  103 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            35789999998 9999999998888999 67777665          33322    22334432221 1111 1223333


Q ss_pred             HHHHHHHHhCCCccEEEEcCCC
Q 020768          243 EVEKIQKAMGTGIDVSFDCAGF  264 (321)
Q Consensus       243 ~~~~~~~~~~~~~d~vid~~g~  264 (321)
                      .+.++.+. .+++|++|.+.|.
T Consensus       104 ~~~~~~~~-~g~iD~lv~nAg~  124 (322)
T 3qlj_A          104 LIQTAVET-FGGLDVLVNNAGI  124 (322)
T ss_dssp             HHHHHHHH-HSCCCEEECCCCC
T ss_pred             HHHHHHHH-cCCCCEEEECCCC
Confidence            34444332 3479999999984

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=95.60  E-value=0.099  Score=48.99  Aligned_cols=95  Identities=16%  Similarity=0.168  Sum_probs=59.5

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHc-CCCeEEEEeCChhHHHHHHH-cCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKE-LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~-g~~~vv~v~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      +.+|+|+|+|++|..++..+... +. .|.+++++.++.+.+.+ .+.. .+..+-  .+.. .+.++.    .++|+||
T Consensus        23 ~k~VlIiGAGgiG~aia~~L~~~~g~-~V~v~~R~~~ka~~la~~~~~~-~~~~D~--~d~~-~l~~~l----~~~DvVI   93 (467)
T 2axq_A           23 GKNVLLLGSGFVAQPVIDTLAANDDI-NVTVACRTLANAQALAKPSGSK-AISLDV--TDDS-ALDKVL----ADNDVVI   93 (467)
T ss_dssp             CEEEEEECCSTTHHHHHHHHHTSTTE-EEEEEESSHHHHHHHHGGGTCE-EEECCT--TCHH-HHHHHH----HTSSEEE
T ss_pred             CCEEEEECChHHHHHHHHHHHhCCCC-eEEEEECCHHHHHHHHHhcCCc-EEEEec--CCHH-HHHHHH----cCCCEEE
Confidence            56899999999999998888877 56 68888888887665443 3432 222221  1221 233322    2689999


Q ss_pred             EcCCCHHHHHHHHHHcccCCEEEEEc
Q 020768          260 DCAGFNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       260 d~~g~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      +|++..........+++.+-.++...
T Consensus        94 n~tp~~~~~~v~~a~l~~g~~vvd~~  119 (467)
T 2axq_A           94 SLIPYTFHPNVVKSAIRTKTDVVTSS  119 (467)
T ss_dssp             ECSCGGGHHHHHHHHHHHTCEEEECS
T ss_pred             ECCchhhhHHHHHHHHhcCCEEEEee
Confidence            99996433333345566666666554

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=95.59  E-value=0.02  Score=49.60  Aligned_cols=95  Identities=14%  Similarity=0.161  Sum_probs=62.2

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHH-HHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      .+.+++|+|+|++|..+++.+...|. .|++++++.++.+ ++++++....++..+ ..       ++.  . +++|++|
T Consensus       118 ~~k~vlViGaGg~g~a~a~~L~~~G~-~V~v~~R~~~~~~~la~~~~~~~~~~~~~-~~-------~~~--~-~~~DivV  185 (271)
T 1nyt_A          118 PGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALS-MD-------ELE--G-HEFDLII  185 (271)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECC-SG-------GGT--T-CCCSEEE
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHhhccCCeeEec-HH-------Hhc--c-CCCCEEE
Confidence            57899999999999999999999996 7888888887754 555665311011111 01       110  1 5799999


Q ss_pred             EcCCCHHHHH---HHHHHcccCCEEEEEcCC
Q 020768          260 DCAGFNKTMS---TALSATRAGGKVCLVGMG  287 (321)
Q Consensus       260 d~~g~~~~~~---~~~~~l~~~G~~v~~g~~  287 (321)
                      ++++....-.   .-...++++..++.+...
T Consensus       186 n~t~~~~~~~~~~i~~~~l~~~~~v~D~~y~  216 (271)
T 1nyt_A          186 NATSSGISGDIPAIPSSLIHPGIYCYDMFYQ  216 (271)
T ss_dssp             ECCSCGGGTCCCCCCGGGCCTTCEEEESCCC
T ss_pred             ECCCCCCCCCCCCCCHHHcCCCCEEEEeccC
Confidence            9999753200   012346677777777754

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=95.58  E-value=0.14  Score=44.53  Aligned_cols=91  Identities=18%  Similarity=0.216  Sum_probs=60.1

Q ss_pred             CEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHc-------------CCCeE--------EecCCCcccHH
Q 020768          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL-------------GADNI--------VKVSTNLQDIA  241 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~-------------g~~~v--------i~~~~~~~~~~  241 (321)
                      ++|.|+|+|.+|...++.+...|. .|++.+.++++.+.+.+.             +....        +..   ..+  
T Consensus         5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~---~~~--   78 (283)
T 4e12_A            5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY---SDD--   78 (283)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE---ESC--
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE---eCC--
Confidence            689999999999999999999999 788899999887766543             22100        000   001  


Q ss_pred             HHHHHHHHHhCCCccEEEEcCCCH-----HHHHHHHHHcccCCEEEEEc
Q 020768          242 EEVEKIQKAMGTGIDVSFDCAGFN-----KTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       242 ~~~~~~~~~~~~~~d~vid~~g~~-----~~~~~~~~~l~~~G~~v~~g  285 (321)
                        +.+.    -...|+||+++..+     ..+..+...++++..++...
T Consensus        79 --~~~~----~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~t  121 (283)
T 4e12_A           79 --LAQA----VKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNS  121 (283)
T ss_dssp             --HHHH----TTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred             --HHHH----hccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECC
Confidence              1111    25689999999974     23445556677766655444

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=95.57  E-value=0.13  Score=49.95  Aligned_cols=104  Identities=19%  Similarity=0.227  Sum_probs=63.1

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCCh--hHHHHHHHcCCCeEEecCCCc-ccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD--YRLSVAKELGADNIVKVSTNL-QDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~--~~~~~~~~~g~~~vi~~~~~~-~~~~~~~~~~~~~~~~~~d  256 (321)
                      .|+++||+|+ +++|...++.+...|+ +|++.+...  +..+.+++.|...+.. ..+- .+..+.+.+..+. .+.+|
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga-~Vv~~~~~~~~~~~~~i~~~g~~~~~~-~~Dv~~~~~~~~~~~~~~-~G~iD  397 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGA-KVVVNDFKDATKTVDEIKAAGGEAWPD-QHDVAKDSEAIIKNVIDK-YGTID  397 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHHTTCEEEEE-CCCHHHHHHHHHHHHHHH-HSCCC
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCC-EEEEEeCccHHHHHHHHHhcCCeEEEE-EcChHHHHHHHHHHHHHh-cCCCC
Confidence            3678899998 9999999999999999 577665422  2223344455433222 1111 2222333333332 35799


Q ss_pred             EEEEcCCCH----------H---------------HHHHHHHHcc--cCCEEEEEcCC
Q 020768          257 VSFDCAGFN----------K---------------TMSTALSATR--AGGKVCLVGMG  287 (321)
Q Consensus       257 ~vid~~g~~----------~---------------~~~~~~~~l~--~~G~~v~~g~~  287 (321)
                      ++|++.|-.          +               ..+.++..+.  .+|+|+.+++.
T Consensus       398 iLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~  455 (604)
T 2et6_A          398 ILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITST  455 (604)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCh
Confidence            999998842          1               2345556663  35899999853

>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*

Probab=95.57  E-value=0.038  Score=46.59  Aligned_cols=103  Identities=18%  Similarity=0.195  Sum_probs=68.3

Q ss_pred             HHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHH
Q 020768          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQ  248 (321)
Q Consensus       173 ~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~  248 (321)
                      .++...++++.+||-+|+|. |..+..+++.. . .+++++.+++..+.+++    .+...+.....+..++.       
T Consensus        13 ~~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~-~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-------   82 (239)
T 1xxl_A           13 MIKTAECRAEHRVLDIGAGA-GHTALAFSPYV-Q-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP-------   82 (239)
T ss_dssp             HHHHHTCCTTCEEEEESCTT-SHHHHHHGGGS-S-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC-------
T ss_pred             HHHHhCcCCCCEEEEEccCc-CHHHHHHHHhC-C-EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCC-------
Confidence            34667889999999999865 77777777654 3 79999999988777654    24332211111111110       


Q ss_pred             HHhCCCccEEEEcCCC------HHHHHHHHHHcccCCEEEEEcC
Q 020768          249 KAMGTGIDVSFDCAGF------NKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       249 ~~~~~~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                       .....+|+|+....-      ...+..+.+.|+++|++++...
T Consensus        83 -~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~  125 (239)
T 1xxl_A           83 -FPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDH  125 (239)
T ss_dssp             -SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             -CCCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEc
Confidence             113569999975321      3567889999999999998753

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=95.57  E-value=0.042  Score=49.16  Aligned_cols=86  Identities=21%  Similarity=0.240  Sum_probs=60.6

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      .|.+|.|+|.|.+|...++.++.+|. .|++.+++.++ +.+.++|+..    .    ++.+.+        ...|+|+.
T Consensus       145 ~g~~vgIIG~G~iG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~----~----~l~e~l--------~~aDiVil  206 (333)
T 2d0i_A          145 YGKKVGILGMGAIGKAIARRLIPFGV-KLYYWSRHRKV-NVEKELKARY----M----DIDELL--------EKSDIVIL  206 (333)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCH-HHHHHHTEEE----C----CHHHHH--------HHCSEEEE
T ss_pred             CcCEEEEEccCHHHHHHHHHHHHCCC-EEEEECCCcch-hhhhhcCcee----c----CHHHHH--------hhCCEEEE
Confidence            46789999999999999999999998 68888888776 5555666421    1    222222        13699999


Q ss_pred             cCCCHH----HH-HHHHHHcccCCEEEEEc
Q 020768          261 CAGFNK----TM-STALSATRAGGKVCLVG  285 (321)
Q Consensus       261 ~~g~~~----~~-~~~~~~l~~~G~~v~~g  285 (321)
                      ++....    .+ ...+..++++ .++.++
T Consensus       207 ~vp~~~~t~~~i~~~~~~~mk~g-ilin~s  235 (333)
T 2d0i_A          207 ALPLTRDTYHIINEERVKKLEGK-YLVNIG  235 (333)
T ss_dssp             CCCCCTTTTTSBCHHHHHHTBTC-EEEECS
T ss_pred             cCCCChHHHHHhCHHHHhhCCCC-EEEECC
Confidence            888651    22 2456778888 776666

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=95.54  E-value=0.034  Score=48.56  Aligned_cols=92  Identities=20%  Similarity=0.241  Sum_probs=55.1

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCCh-------hHHHHHH---HcCCCeEEecCCCcccHHHHHHHHHHH
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD-------YRLSVAK---ELGADNIVKVSTNLQDIAEEVEKIQKA  250 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~-------~~~~~~~---~~g~~~vi~~~~~~~~~~~~~~~~~~~  250 (321)
                      +.+|||+|+ |.+|...++.+...|. .|++++++.       ++.+.++   ..++.. +..+-  .+ .+.+.+..  
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~-v~~D~--~d-~~~l~~~~--   74 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGN-PTYALVRKTITAANPETKEELIDNYQSLGVIL-LEGDI--ND-HETLVKAI--   74 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTC-CEEEEECCSCCSSCHHHHHHHHHHHHHTTCEE-EECCT--TC-HHHHHHHH--
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCC-cEEEEECCCcccCChHHHHHHHHHHHhCCCEE-EEeCC--CC-HHHHHHHH--
Confidence            457999999 9999999998888898 466666665       5544333   335432 22221  12 22333332  


Q ss_pred             hCCCccEEEEcCCCH--HHHHHHHHHcccC---CEEE
Q 020768          251 MGTGIDVSFDCAGFN--KTMSTALSATRAG---GKVC  282 (321)
Q Consensus       251 ~~~~~d~vid~~g~~--~~~~~~~~~l~~~---G~~v  282 (321)
                        .++|+||.+++..  .....+++.++..   .+++
T Consensus        75 --~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  109 (307)
T 2gas_A           75 --KQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFF  109 (307)
T ss_dssp             --TTCSEEEECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred             --hCCCEEEECCcccccccHHHHHHHHHhcCCceEEe
Confidence              3699999998852  2223445554433   4665

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=95.54  E-value=0.16  Score=44.20  Aligned_cols=87  Identities=16%  Similarity=0.238  Sum_probs=60.4

Q ss_pred             CEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcC
Q 020768          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  262 (321)
                      .+|.|+|+|.+|...+..+...|. .|.+.++++++.+.+.+.|...   .    .+..+.+        ...|+||.|+
T Consensus         5 ~~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~----~~~~~~~--------~~~D~vi~~v   68 (301)
T 3cky_A            5 IKIGFIGLGAMGKPMAINLLKEGV-TVYAFDLMEANVAAVVAQGAQA---C----ENNQKVA--------AASDIIFTSL   68 (301)
T ss_dssp             CEEEEECCCTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHTTTCEE---C----SSHHHHH--------HHCSEEEECC
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCee---c----CCHHHHH--------hCCCEEEEEC
Confidence            579999999999998888888888 6888888888887776655421   1    1222222        1379999999


Q ss_pred             CCHHHHHHHH-------HHcccCCEEEEEc
Q 020768          263 GFNKTMSTAL-------SATRAGGKVCLVG  285 (321)
Q Consensus       263 g~~~~~~~~~-------~~l~~~G~~v~~g  285 (321)
                      +.+..+...+       ..++++..++.++
T Consensus        69 p~~~~~~~v~~~~~~l~~~l~~~~~vv~~~   98 (301)
T 3cky_A           69 PNAGIVETVMNGPGGVLSACKAGTVIVDMS   98 (301)
T ss_dssp             SSHHHHHHHHHSTTCHHHHSCTTCEEEECC
T ss_pred             CCHHHHHHHHcCcchHhhcCCCCCEEEECC
Confidence            8765555444       3566676666655

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=95.54  E-value=0.052  Score=45.92  Aligned_cols=98  Identities=17%  Similarity=0.204  Sum_probs=57.3

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHH-cCCCeEEEEeCChh-HHHHHHHcCCCeEEecCCCc-ccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARA-FGAPRIVIVDVDDY-RLSVAKELGADNIVKVSTNL-QDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~-~g~~~vv~v~~~~~-~~~~~~~~g~~~vi~~~~~~-~~~~~~~~~~~~~~~~~~d  256 (321)
                      .++++||+|+ +++|...++.+.. .|. .|+.++++++ +.+.      ...+..+-.+ .+..+.+ +..  ...++|
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~-~v~~~~~~~~~~~~~------~~~~~~Dv~~~~~v~~~~-~~~--~~~~id   72 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNH-TVINIDIQQSFSAEN------LKFIKADLTKQQDITNVL-DII--KNVSFD   72 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTE-EEEEEESSCCCCCTT------EEEEECCTTCHHHHHHHH-HHT--TTCCEE
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCc-EEEEecccccccccc------ceEEecCcCCHHHHHHHH-HHH--HhCCCC
Confidence            4678999998 9999988876665 666 6777776654 2111      1222222221 2222222 211  135799


Q ss_pred             EEEEcCCCH----------H---------------HHHHHHHHcccCCEEEEEcCCC
Q 020768          257 VSFDCAGFN----------K---------------TMSTALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       257 ~vid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~~  288 (321)
                      ++|++.|..          +               ..+.++..+..+|+++.+++..
T Consensus        73 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~  129 (244)
T 4e4y_A           73 GIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQ  129 (244)
T ss_dssp             EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGG
T ss_pred             EEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHH
Confidence            999999852          1               1233344556678999998543

>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4

Probab=95.53  E-value=0.077  Score=42.48  Aligned_cols=102  Identities=17%  Similarity=0.252  Sum_probs=67.6

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHc----CCCe--EEecCCCcccHHHHHHHH
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL----GADN--IVKVSTNLQDIAEEVEKI  247 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~----g~~~--vi~~~~~~~~~~~~~~~~  247 (321)
                      ++....+++++||-+|+|. |..+..+++. +. .+++++.+++..+.+++.    +...  +.....+..+.   .   
T Consensus        45 ~~~~~~~~~~~vLdiG~G~-G~~~~~~~~~-~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---~---  115 (194)
T 1dus_A           45 VENVVVDKDDDILDLGCGY-GVIGIALADE-VK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN---V---  115 (194)
T ss_dssp             HHHCCCCTTCEEEEETCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT---C---
T ss_pred             HHHcccCCCCeEEEeCCCC-CHHHHHHHHc-CC-eEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcc---c---
Confidence            4556777899999998863 6677777777 65 799999999887777643    4332  21111111111   0   


Q ss_pred             HHHhCCCccEEEEcCCC-------HHHHHHHHHHcccCCEEEEEcCC
Q 020768          248 QKAMGTGIDVSFDCAGF-------NKTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       248 ~~~~~~~~d~vid~~g~-------~~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                         ....+|+|+-...-       ...+..+.+.|+++|.+++....
T Consensus       116 ---~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~  159 (194)
T 1dus_A          116 ---KDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQT  159 (194)
T ss_dssp             ---TTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred             ---ccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECC
Confidence               13569999975431       24677888999999999888744

>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53

Probab=95.52  E-value=0.079  Score=43.75  Aligned_cols=99  Identities=16%  Similarity=0.113  Sum_probs=65.1

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHhCCCc
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~  255 (321)
                      .++++||=+|+| .|..++.+++......+++++.+++..+.+++    .+.+.+.....+..++.+    .  .....+
T Consensus        40 ~~~~~vLDiGcG-~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~----~--~~~~~~  112 (214)
T 1yzh_A           40 NDNPIHVEVGSG-KGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTD----Y--FEDGEI  112 (214)
T ss_dssp             SCCCEEEEESCT-TSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGG----T--SCTTCC
T ss_pred             CCCCeEEEEccC-cCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHh----h--cCCCCC
Confidence            457788888876 47777788888744489999999988777654    344332222122112110    0  013468


Q ss_pred             cEEEEcCCC--------------HHHHHHHHHHcccCCEEEEEc
Q 020768          256 DVSFDCAGF--------------NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       256 d~vid~~g~--------------~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      |.|+-....              ...+..+.+.|+++|.+++..
T Consensus       113 D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  156 (214)
T 1yzh_A          113 DRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT  156 (214)
T ss_dssp             SEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred             CEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence            998876654              258889999999999988864

>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*

Probab=95.52  E-value=0.066  Score=47.60  Aligned_cols=98  Identities=17%  Similarity=0.178  Sum_probs=65.1

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCC--------CeEEecCCCcccHHHHHHHHHHHh
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA--------DNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~--------~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      .++.+||.+|+|. |..+..+++..+...+++++.+++..+.+++.-.        ..+-..   ..|..+.+..    .
T Consensus       115 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~---~~D~~~~l~~----~  186 (321)
T 2pt6_A          115 KEPKNVLVVGGGD-GGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVF---IEDASKFLEN----V  186 (321)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEE---ESCHHHHHHH----C
T ss_pred             CCCCEEEEEcCCc-cHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEE---EccHHHHHhh----c
Confidence            4568999998754 5666677776555589999999999998876321        111111   1233332221    2


Q ss_pred             CCCccEEEEcCCC----------HHHHHHHHHHcccCCEEEEEc
Q 020768          252 GTGIDVSFDCAGF----------NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       252 ~~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      ...+|+|+-....          .+.++.+.+.|+++|.+++..
T Consensus       187 ~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  230 (321)
T 2pt6_A          187 TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC  230 (321)
T ss_dssp             CSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence            4679999854321          467889999999999998864

>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*

Probab=95.52  E-value=0.1  Score=47.92  Aligned_cols=108  Identities=13%  Similarity=0.084  Sum_probs=69.1

Q ss_pred             HHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH-----------cCC--CeEEecCCCccc
Q 020768          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-----------LGA--DNIVKVSTNLQD  239 (321)
Q Consensus       173 ~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~-----------~g~--~~vi~~~~~~~~  239 (321)
                      .++...++++++||=+|+|. |..++++|+..++..+++++.+++-.+++++           +|.  ..+-....+..+
T Consensus       165 il~~l~l~~gd~VLDLGCGt-G~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~  243 (438)
T 3uwp_A          165 MIDEIKMTDDDLFVDLGSGV-GQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLS  243 (438)
T ss_dssp             HHHHHCCCTTCEEEEESCTT-SHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTS
T ss_pred             HHHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccC
Confidence            34667899999998888754 7788888888898779999999865555543           343  333222222112


Q ss_pred             HHHHHHHHHHHhCCCccEEEEcCC--C---HHHHHHHHHHcccCCEEEEEcCC
Q 020768          240 IAEEVEKIQKAMGTGIDVSFDCAG--F---NKTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       240 ~~~~~~~~~~~~~~~~d~vid~~g--~---~~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      ..  ....    -..+|+|+-..-  .   ...+...++.|++||+++..-..
T Consensus       244 lp--~~d~----~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE~f  290 (438)
T 3uwp_A          244 EE--WRER----IANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSKPF  290 (438)
T ss_dssp             HH--HHHH----HHTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESSCS
T ss_pred             Cc--cccc----cCCccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEeecc
Confidence            11  1110    125899985221  1   23466778899999999988543

>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31

Probab=95.49  E-value=0.11  Score=48.18  Aligned_cols=107  Identities=16%  Similarity=0.179  Sum_probs=68.9

Q ss_pred             HHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-----------HHcC--CCeEEecC-CCcc
Q 020768          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-----------KELG--ADNIVKVS-TNLQ  238 (321)
Q Consensus       173 ~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-----------~~~g--~~~vi~~~-~~~~  238 (321)
                      .++...++++++||=+|+| .|.+++.+|+..+...|++++.+++..+.+           +.+|  ...+-... +...
T Consensus       234 ml~~l~l~~g~~VLDLGCG-sG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~  312 (433)
T 1u2z_A          234 VYQQCQLKKGDTFMDLGSG-VGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFV  312 (433)
T ss_dssp             HHHHTTCCTTCEEEEESCT-TSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCST
T ss_pred             HHHhcCCCCCCEEEEeCCC-cCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccc
Confidence            3466788899999988886 488888899988876899999998765544           3456  33332211 1111


Q ss_pred             cHHHHHHHHHHHhCCCccEEEEc--CCCH---HHHHHHHHHcccCCEEEEEc
Q 020768          239 DIAEEVEKIQKAMGTGIDVSFDC--AGFN---KTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       239 ~~~~~~~~~~~~~~~~~d~vid~--~g~~---~~~~~~~~~l~~~G~~v~~g  285 (321)
                      +.. .+...    ...+|+|+-.  ...+   ..+..+.+.|++||+++..-
T Consensus       313 ~~~-~~~~~----~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~d  359 (433)
T 1u2z_A          313 DNN-RVAEL----IPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK  359 (433)
T ss_dssp             TCH-HHHHH----GGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             ccc-ccccc----cCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEee
Confidence            100 01111    2469999962  2222   23568889999999999884

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=95.48  E-value=0.11  Score=47.52  Aligned_cols=86  Identities=17%  Similarity=0.121  Sum_probs=52.9

Q ss_pred             cCC-CCCCEEEEEcC-ChhHHHHHHHHHH-cCCCeEEEEeCChhH----------------HHHHHHcCCCeE-EecCC-
Q 020768          177 ANI-GPETNVLIMGA-GPIGLVTMLGARA-FGAPRIVIVDVDDYR----------------LSVAKELGADNI-VKVST-  235 (321)
Q Consensus       177 ~~~-~~g~~vlI~Ga-g~vG~~a~qla~~-~g~~~vv~v~~~~~~----------------~~~~~~~g~~~v-i~~~~-  235 (321)
                      ..+ ..++++||+|+ +++|.+.+..+.. .|+ .|++++.+.+.                .+.+++.|.... +..+- 
T Consensus        41 ~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA-~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvt  119 (405)
T 3zu3_A           41 GPIANGPKRVLVIGASTGYGLAARITAAFGCGA-DTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAF  119 (405)
T ss_dssp             CCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred             CCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCC-EEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCC
Confidence            344 45677899998 9999988888877 899 57766554321                224455665432 22222 


Q ss_pred             CcccHHHHHHHHHHHhCCCccEEEEcCCC
Q 020768          236 NLQDIAEEVEKIQKAMGTGIDVSFDCAGF  264 (321)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~  264 (321)
                      +.++..+.+.++.+. .+++|+++++.|.
T Consensus       120 d~~~v~~~v~~i~~~-~G~IDiLVNNAG~  147 (405)
T 3zu3_A          120 SDEIKQLTIDAIKQD-LGQVDQVIYSLAS  147 (405)
T ss_dssp             SHHHHHHHHHHHHHH-TSCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHH-cCCCCEEEEcCcc
Confidence            223333444444433 4679999999875

>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A

Probab=95.46  E-value=0.072  Score=49.33  Aligned_cols=102  Identities=18%  Similarity=0.194  Sum_probs=68.0

Q ss_pred             HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCe-EEecCCCcccHHHHHHHHHH
Q 020768          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADN-IVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~-vi~~~~~~~~~~~~~~~~~~  249 (321)
                      .....++|++||=.|+|+ |..+.++++..+...+++++.++++.+.+++    +|... ++..  +..++.+   .+  
T Consensus       240 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~--D~~~~~~---~~--  311 (429)
T 1sqg_A          240 TWLAPQNGEHILDLCAAP-GGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQG--DGRYPSQ---WC--  311 (429)
T ss_dssp             HHHCCCTTCEEEEESCTT-CHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEEC--CTTCTHH---HH--
T ss_pred             HHcCCCCcCeEEEECCCc-hHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeC--chhhchh---hc--
Confidence            445678999999998865 6667777877653489999999988877653    46432 2221  1122211   11  


Q ss_pred             HhCCCccEEEE---cCCCH-------------------------HHHHHHHHHcccCCEEEEEc
Q 020768          250 AMGTGIDVSFD---CAGFN-------------------------KTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       250 ~~~~~~d~vid---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g  285 (321)
                       .+..||.|+-   |+|..                         ..+..+.+.|++||+++...
T Consensus       312 -~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvyst  374 (429)
T 1sqg_A          312 -GEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYAT  374 (429)
T ss_dssp             -TTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             -ccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence             1357999986   55421                         45778889999999998765

>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A

Probab=95.45  E-value=0.14  Score=45.71  Aligned_cols=101  Identities=23%  Similarity=0.274  Sum_probs=66.5

Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHc------CC--CeEEecCCCcccHHHHHHHHHH
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL------GA--DNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~------g~--~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      ....+.+||.+|+|. |..+..+++..+...|++++.+++..+.+++.      +.  ..+-...   .|..+.+...  
T Consensus       117 ~~~~~~~VLdIG~G~-G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~---~D~~~~l~~~--  190 (334)
T 1xj5_A          117 SIPNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI---GDGVAFLKNA--  190 (334)
T ss_dssp             TSSCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEE---SCHHHHHHTS--
T ss_pred             hCCCCCEEEEECCCc-cHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEE---CCHHHHHHhc--
Confidence            345678999998753 66677777766555899999999988888753      11  1111111   2333322211  


Q ss_pred             HhCCCccEEEEcCC----------CHHHHHHHHHHcccCCEEEEEc
Q 020768          250 AMGTGIDVSFDCAG----------FNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       250 ~~~~~~d~vid~~g----------~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                       ....+|+|+-...          ....++.+.+.|+++|.+++-.
T Consensus       191 -~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  235 (334)
T 1xj5_A          191 -AEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA  235 (334)
T ss_dssp             -CTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             -cCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence             1357999996432          2467889999999999999863

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=95.45  E-value=0.063  Score=47.73  Aligned_cols=92  Identities=16%  Similarity=0.256  Sum_probs=55.1

Q ss_pred             CCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       180 ~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      ..+.+|||+|+ |.+|...++.+...|. .|++++++.++      .++..+ ..+-  .+. +.+.++.    .++|+|
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~------~~~~~~-~~Dl--~d~-~~~~~~~----~~~d~v   81 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQGR-TVRGFDLRPSG------TGGEEV-VGSL--EDG-QALSDAI----MGVSAV   81 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTC-CEEEEESSCCS------SCCSEE-ESCT--TCH-HHHHHHH----TTCSEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCC-EEEEEeCCCCC------CCccEE-ecCc--CCH-HHHHHHH----hCCCEE
Confidence            45678999999 9999999999999998 57777777654      233332 2111  122 2233332    379999


Q ss_pred             EEcCCCHH---------------HHHHHHHHcccC--CEEEEEcC
Q 020768          259 FDCAGFNK---------------TMSTALSATRAG--GKVCLVGM  286 (321)
Q Consensus       259 id~~g~~~---------------~~~~~~~~l~~~--G~~v~~g~  286 (321)
                      |.+.+...               ....+++.+...  ++++.+++
T Consensus        82 ih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS  126 (347)
T 4id9_A           82 LHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASS  126 (347)
T ss_dssp             EECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred             EECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence            99876421               122344444433  48888875

>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A

Probab=95.44  E-value=0.059  Score=44.89  Aligned_cols=104  Identities=19%  Similarity=0.209  Sum_probs=65.5

Q ss_pred             HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHHHc-C-CCeEEecCCCcccHHHHHHHHHHHh
Q 020768          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKEL-G-ADNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~~~-g-~~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      +...++++++||-+|+|. |..+..+++..|. ..+++++.+++..+.+++. . ...+.....+..+.. ...    ..
T Consensus        67 ~~~~~~~~~~vLDlG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~----~~  140 (227)
T 1g8a_A           67 KNFPIKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPE-EYR----AL  140 (227)
T ss_dssp             CCCCCCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGG-GGT----TT
T ss_pred             HhcCCCCCCEEEEEeccC-CHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcc-hhh----cc
Confidence            334578999999999876 8888888888642 3799999999766555431 1 111111111111110 000    01


Q ss_pred             CCCccEEEEcCCCH----HHHHHHHHHcccCCEEEEE
Q 020768          252 GTGIDVSFDCAGFN----KTMSTALSATRAGGKVCLV  284 (321)
Q Consensus       252 ~~~~d~vid~~g~~----~~~~~~~~~l~~~G~~v~~  284 (321)
                      ...+|+|+-....+    ..+..+.+.|+++|++++.
T Consensus       141 ~~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  177 (227)
T 1g8a_A          141 VPKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             CCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cCCceEEEECCCCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence            34699999766543    2378889999999999887

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=95.42  E-value=0.059  Score=46.96  Aligned_cols=75  Identities=12%  Similarity=0.213  Sum_probs=49.7

Q ss_pred             CCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHc----CCCeE-EecCCCcccHHHHHHHHHHHhC
Q 020768          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL----GADNI-VKVSTNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       180 ~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~----g~~~v-i~~~~~~~~~~~~~~~~~~~~~  252 (321)
                      -.|.++||+|+ |++|..++..+...|+ .|++++++.++.+.+ +++    +...+ .+..+     .+.+.+.    -
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~-~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~-----~~~~~~~----~  186 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETAD-----DASRAEA----V  186 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCS-----HHHHHHH----T
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCC-----HHHHHHH----H
Confidence            36789999995 9999999999999999 588888887765533 333    32221 23221     1223332    2


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      ..+|++|+++|.
T Consensus       187 ~~~DvlVn~ag~  198 (287)
T 1lu9_A          187 KGAHFVFTAGAI  198 (287)
T ss_dssp             TTCSEEEECCCT
T ss_pred             HhCCEEEECCCc
Confidence            358999999973

>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*

Probab=95.39  E-value=0.076  Score=45.31  Aligned_cols=100  Identities=14%  Similarity=0.098  Sum_probs=64.9

Q ss_pred             CCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHH--HhC
Q 020768          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQK--AMG  252 (321)
Q Consensus       179 ~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~--~~~  252 (321)
                      ..++.+||=+|+|. |..++.+|+......|++++.++++.+++++    +|...+.....   +..    ++..  ...
T Consensus        78 ~~~~~~vLDiG~G~-G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~---d~~----~~~~~~~~~  149 (249)
T 3g89_A           78 WQGPLRVLDLGTGA-GFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWG---RAE----VLAREAGHR  149 (249)
T ss_dssp             CCSSCEEEEETCTT-TTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEEC---CHH----HHTTSTTTT
T ss_pred             cCCCCEEEEEcCCC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEEC---cHH----HhhcccccC
Confidence            35788888888743 5566667777654489999999998887753    56654322222   211    1211  012


Q ss_pred             CCccEEEEcCCC--HHHHHHHHHHcccCCEEEEEcC
Q 020768          253 TGIDVSFDCAGF--NKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       253 ~~~d~vid~~g~--~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      ..||+|+...-.  +..++.+.+.|+++|+++.+-.
T Consensus       150 ~~fD~I~s~a~~~~~~ll~~~~~~LkpgG~l~~~~g  185 (249)
T 3g89_A          150 EAYARAVARAVAPLCVLSELLLPFLEVGGAAVAMKG  185 (249)
T ss_dssp             TCEEEEEEESSCCHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred             CCceEEEECCcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence            579999874332  4567788899999999988653

>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}

Probab=95.38  E-value=0.028  Score=46.99  Aligned_cols=95  Identities=18%  Similarity=0.200  Sum_probs=67.3

Q ss_pred             CCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCC-eEEecCCCcccHHHHHHHHHHHh-CCCcc
Q 020768          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD-NIVKVSTNLQDIAEEVEKIQKAM-GTGID  256 (321)
Q Consensus       179 ~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~~~~~~~~~~-~~~~d  256 (321)
                      ++++.+||=+|+|. |..+..+++. +. .+++++.+++..+.+++.... .++..+-. ...        ... ...+|
T Consensus        46 ~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~-~~~--------~~~~~~~fD  113 (226)
T 3m33_A           46 LTPQTRVLEAGCGH-GPDAARFGPQ-AA-RWAAYDFSPELLKLARANAPHADVYEWNGK-GEL--------PAGLGAPFG  113 (226)
T ss_dssp             CCTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHCTTSEEEECCSC-SSC--------CTTCCCCEE
T ss_pred             CCCCCeEEEeCCCC-CHHHHHHHHc-CC-EEEEEECCHHHHHHHHHhCCCceEEEcchh-hcc--------CCcCCCCEE
Confidence            36789999999864 6677777776 66 799999999999988875322 22221110 000        011 35799


Q ss_pred             EEEEcCCCHHHHHHHHHHcccCCEEEEEc
Q 020768          257 VSFDCAGFNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      +|+....-...+..+.+.|+++|+++..+
T Consensus       114 ~v~~~~~~~~~l~~~~~~LkpgG~l~~~~  142 (226)
T 3m33_A          114 LIVSRRGPTSVILRLPELAAPDAHFLYVG  142 (226)
T ss_dssp             EEEEESCCSGGGGGHHHHEEEEEEEEEEE
T ss_pred             EEEeCCCHHHHHHHHHHHcCCCcEEEEeC
Confidence            99987666678899999999999999554

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=95.37  E-value=0.11  Score=49.32  Aligned_cols=81  Identities=22%  Similarity=0.304  Sum_probs=52.0

Q ss_pred             CCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhH----HH---HHHHcCCCeE-EecCCCcccHHHHHHHHHH
Q 020768          179 IGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYR----LS---VAKELGADNI-VKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       179 ~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~----~~---~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~  249 (321)
                      ++++.++||+|+ |++|...+..+...|+++++.+.++...    .+   .+++.|.... +..+-  .+ .+.+.++.+
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv--td-~~~v~~~~~  332 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDV--AE-RDALAALVT  332 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCS--SC-HHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCC--CC-HHHHHHHHh
Confidence            567889999998 9999999988888898767777776531    22   2334454322 21221  12 223444433


Q ss_pred             HhCCCccEEEEcCCC
Q 020768          250 AMGTGIDVSFDCAGF  264 (321)
Q Consensus       250 ~~~~~~d~vid~~g~  264 (321)
                      .  ..+|+||.+.|.
T Consensus       333 ~--~~ld~VVh~AGv  345 (511)
T 2z5l_A          333 A--YPPNAVFHTAGI  345 (511)
T ss_dssp             H--SCCSEEEECCCC
T ss_pred             c--CCCcEEEECCcc
Confidence            2  579999999884

>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}

Probab=95.36  E-value=0.057  Score=45.77  Aligned_cols=102  Identities=20%  Similarity=0.159  Sum_probs=69.1

Q ss_pred             HHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCC-eEEecCCCcccHHHHHHHHHHH
Q 020768          172 HACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD-NIVKVSTNLQDIAEEVEKIQKA  250 (321)
Q Consensus       172 ~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~~~~~~~~~  250 (321)
                      ..++.....++.+||-+|+| .|..+..+++......+++++.+++..+.+++.... .++..+.  .++       .  
T Consensus        24 ~l~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~--~~~-------~--   91 (259)
T 2p35_A           24 DLLAQVPLERVLNGYDLGCG-PGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADL--ATW-------K--   91 (259)
T ss_dssp             HHHTTCCCSCCSSEEEETCT-TTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCT--TTC-------C--
T ss_pred             HHHHhcCCCCCCEEEEecCc-CCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECCh--hhc-------C--
Confidence            34455667889999999986 477777788776333799999999999988765322 2222111  111       0  


Q ss_pred             hCCCccEEEEcCC-----C-HHHHHHHHHHcccCCEEEEEc
Q 020768          251 MGTGIDVSFDCAG-----F-NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       251 ~~~~~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      ....+|+|+....     . ...+..+.+.|+++|++++.-
T Consensus        92 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~  132 (259)
T 2p35_A           92 PAQKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQM  132 (259)
T ss_dssp             CSSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             ccCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEe
Confidence            1356999997542     2 346778889999999998764

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=95.36  E-value=0.05  Score=52.88  Aligned_cols=104  Identities=18%  Similarity=0.253  Sum_probs=58.1

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeC---------ChhHHH----HHHHcCCCeEEecCCCcccHHHHHHH
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV---------DDYRLS----VAKELGADNIVKVSTNLQDIAEEVEK  246 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~---------~~~~~~----~~~~~g~~~vi~~~~~~~~~~~~~~~  246 (321)
                      .|+++||+|+ +++|...+..+...|+ .|+++++         +.++.+    .+++.+...+.++.+ ..+..+.+.+
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d-~~~~~~~~~~   95 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAERGA-KVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNS-VIDGAKVIET   95 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEC--------------CHHHHHHHHHHTTCCEEECCCC-GGGHHHHHC-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCC-HHHHHHHHHH
Confidence            4788999998 9999999999989999 5776654         333322    234455555555433 2344444443


Q ss_pred             HHHHhCCCccEEEEcCCCH----------H---------------HHHHHHHHccc--CCEEEEEcCC
Q 020768          247 IQKAMGTGIDVSFDCAGFN----------K---------------TMSTALSATRA--GGKVCLVGMG  287 (321)
Q Consensus       247 ~~~~~~~~~d~vid~~g~~----------~---------------~~~~~~~~l~~--~G~~v~~g~~  287 (321)
                      +.+. .+.+|++|+++|..          +               ..+.++..|+.  .|+|+++++.
T Consensus        96 ~~~~-~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~  162 (613)
T 3oml_A           96 AIKA-FGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSN  162 (613)
T ss_dssp             ----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCH
T ss_pred             HHHH-CCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCH
Confidence            3322 35799999998842          1               23344455543  4899999863

>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*

Probab=95.35  E-value=0.1  Score=46.11  Aligned_cols=98  Identities=21%  Similarity=0.169  Sum_probs=64.2

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcC---------CCeEEecCCCcccHHHHHHHHHHH
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG---------ADNIVKVSTNLQDIAEEVEKIQKA  250 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g---------~~~vi~~~~~~~~~~~~~~~~~~~  250 (321)
                      ..+.+||++|+|. |..+..+++..+...+++++.+++-.+.+++.-         ...+-...   .|..+.+..    
T Consensus        76 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~---~D~~~~l~~----  147 (314)
T 1uir_A           76 PEPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVI---DDARAYLER----  147 (314)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEE---SCHHHHHHH----
T ss_pred             CCCCeEEEEcCCc-CHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEE---chHHHHHHh----
Confidence            4568999998753 556667777655558999999998888877521         11111111   233332222    


Q ss_pred             hCCCccEEEEcCC-------------CHHHHHHHHHHcccCCEEEEEc
Q 020768          251 MGTGIDVSFDCAG-------------FNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       251 ~~~~~d~vid~~g-------------~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      ....+|+|+-...             ..+.++.+.+.|+++|.+++..
T Consensus       148 ~~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  195 (314)
T 1uir_A          148 TEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT  195 (314)
T ss_dssp             CCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred             cCCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence            2567999985432             2356889999999999998864

>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53

Probab=95.34  E-value=0.16  Score=41.99  Aligned_cols=98  Identities=9%  Similarity=0.048  Sum_probs=64.5

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      ++.+||=+|+|. |..++.+|+......+++++.+++..+.+++    .+...+-....+..+    +...  .....+|
T Consensus        38 ~~~~vLDiGcG~-G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~----l~~~--~~~~~~d  110 (213)
T 2fca_A           38 DNPIHIEVGTGK-GQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADT----LTDV--FEPGEVK  110 (213)
T ss_dssp             CCCEEEEECCTT-SHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGG----HHHH--CCTTSCC
T ss_pred             CCceEEEEecCC-CHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHH----HHhh--cCcCCcC
Confidence            567777778764 7778888888644489999999988777654    455433222222222    1111  1134689


Q ss_pred             EEEEcCCC--------------HHHHHHHHHHcccCCEEEEEc
Q 020768          257 VSFDCAGF--------------NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       257 ~vid~~g~--------------~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      .|+-....              ...+..+.+.|+++|.+++..
T Consensus       111 ~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t  153 (213)
T 2fca_A          111 RVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT  153 (213)
T ss_dssp             EEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred             EEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence            88755432              357889999999999998765

>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}

Probab=95.34  E-value=0.12  Score=44.58  Aligned_cols=100  Identities=19%  Similarity=0.192  Sum_probs=65.2

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeE--EecCCCcccHHHHHHHHHHHh
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI--VKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~v--i~~~~~~~~~~~~~~~~~~~~  251 (321)
                      +....++++++||=+|+|. |..+..+++. |. .|++++.+++-.+.+++.-....  .+..+......       ...
T Consensus        38 l~~l~l~~g~~VLDlGcGt-G~~a~~La~~-g~-~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~-------~~~  107 (261)
T 3iv6_A           38 IFLENIVPGSTVAVIGAST-RFLIEKALER-GA-SVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIP-------KEL  107 (261)
T ss_dssp             HHTTTCCTTCEEEEECTTC-HHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCC-------GGG
T ss_pred             HHhcCCCCcCEEEEEeCcc-hHHHHHHHhc-CC-EEEEEECCHHHHHHHHHHHHhccceeeeeecccccc-------ccc
Confidence            4567788999999999864 7778788775 66 79999999999998886432211  11111110000       001


Q ss_pred             CCCccEEEEcCC-----C---HHHHHHHHHHcccCCEEEEE
Q 020768          252 GTGIDVSFDCAG-----F---NKTMSTALSATRAGGKVCLV  284 (321)
Q Consensus       252 ~~~~d~vid~~g-----~---~~~~~~~~~~l~~~G~~v~~  284 (321)
                      ...+|+|+-+..     .   ...+..+.+.| |+|++++-
T Consensus       108 ~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS  147 (261)
T 3iv6_A          108 AGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRAS  147 (261)
T ss_dssp             TTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred             CCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEE
Confidence            357999997532     1   12567777889 99998754

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=95.33  E-value=0.092  Score=43.70  Aligned_cols=100  Identities=20%  Similarity=0.321  Sum_probs=67.3

Q ss_pred             HcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCC-eEEecCCCcccHHHHHHHHHHH
Q 020768          176 RANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGAD-NIVKVSTNLQDIAEEVEKIQKA  250 (321)
Q Consensus       176 ~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~-~vi~~~~~~~~~~~~~~~~~~~  250 (321)
                      ...++++++||=+|+|..|..++.+++..+. .+++++.+++..+.+++    .+.. .++.-+.  ..+.    .+   
T Consensus        50 ~~~~~~~~~vLDlG~G~~G~~~~~la~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~--~~~~----~~---  119 (230)
T 3evz_A           50 KTFLRGGEVALEIGTGHTAMMALMAEKFFNC-KVTATEVDEEFFEYARRNIERNNSNVRLVKSNG--GIIK----GV---  119 (230)
T ss_dssp             HTTCCSSCEEEEECCTTTCHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHTTCCCEEEECSS--CSST----TT---
T ss_pred             HhhcCCCCEEEEcCCCHHHHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCc--hhhh----hc---
Confidence            3456789999999998668888888887655 79999999988777653    3431 2222110  0010    01   


Q ss_pred             hCCCccEEEEcCC----------------------C---HHHHHHHHHHcccCCEEEEEc
Q 020768          251 MGTGIDVSFDCAG----------------------F---NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       251 ~~~~~d~vid~~g----------------------~---~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      ....+|+|+-...                      .   ...+..+.+.|+++|+++++-
T Consensus       120 ~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  179 (230)
T 3evz_A          120 VEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYL  179 (230)
T ss_dssp             CCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             ccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEe
Confidence            1356999995421                      0   356788889999999998864

>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}

Probab=95.32  E-value=0.13  Score=45.76  Aligned_cols=87  Identities=21%  Similarity=0.244  Sum_probs=59.9

Q ss_pred             EEEEEcCChhHHHHHHHHHHc-CCCeEEEEeCChhHHH-HHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 020768          184 NVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~-g~~~vv~v~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  261 (321)
                      +|.|+|+|.+|...+..++.. +.+.+.+++.++++.+ +++++|+.    +    .++.+.+    .  ...+|+|+.|
T Consensus         5 ~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~----~----~~~~~~l----~--~~~~D~V~i~   70 (331)
T 4hkt_A            5 RFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE----V----RTIDAIE----A--AADIDAVVIC   70 (331)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE----E----CCHHHHH----H--CTTCCEEEEC
T ss_pred             EEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC----c----CCHHHHh----c--CCCCCEEEEe
Confidence            688999999998888777765 6644446777777755 45667764    1    1222222    1  3569999999


Q ss_pred             CCCHHHHHHHHHHcccCCEEEEEc
Q 020768          262 AGFNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       262 ~g~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      +....+.+.+..++..+-. +++.
T Consensus        71 tp~~~h~~~~~~al~~gk~-v~~E   93 (331)
T 4hkt_A           71 TPTDTHADLIERFARAGKA-IFCE   93 (331)
T ss_dssp             SCGGGHHHHHHHHHHTTCE-EEEC
T ss_pred             CCchhHHHHHHHHHHcCCc-EEEe
Confidence            9988888888888877644 4454

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=95.31  E-value=0.092  Score=46.59  Aligned_cols=89  Identities=21%  Similarity=0.236  Sum_probs=58.1

Q ss_pred             EEEEEcCChhHHHH-HHHHHHcCCCeEEEEeCChhHHH-HHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 020768          184 NVLIMGAGPIGLVT-MLGARAFGAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (321)
Q Consensus       184 ~vlI~Gag~vG~~a-~qla~~~g~~~vv~v~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  261 (321)
                      +|.|+|+|.+|... +..++..+.+.+.+++.++++.+ +++++|.....      .++.+    +..  ...+|+|+.+
T Consensus         2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~------~~~~~----~l~--~~~~D~V~i~   69 (332)
T 2glx_A            2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSV------TSVEE----LVG--DPDVDAVYVS   69 (332)
T ss_dssp             EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCB------SCHHH----HHT--CTTCCEEEEC
T ss_pred             eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCccc------CCHHH----Hhc--CCCCCEEEEe
Confidence            68899999999875 53333377754556777877665 45667764221      12222    211  3469999999


Q ss_pred             CCCHHHHHHHHHHcccCCEEEEEc
Q 020768          262 AGFNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       262 ~g~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      +....+.+.+..+|+.|-. +++.
T Consensus        70 tp~~~h~~~~~~al~~Gk~-v~~e   92 (332)
T 2glx_A           70 TTNELHREQTLAAIRAGKH-VLCE   92 (332)
T ss_dssp             SCGGGHHHHHHHHHHTTCE-EEEC
T ss_pred             CChhHhHHHHHHHHHCCCe-EEEe
Confidence            9988788888888877544 4444

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=95.31  E-value=0.05  Score=48.55  Aligned_cols=95  Identities=25%  Similarity=0.230  Sum_probs=56.9

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCCh----hHHHHHH---HcCCCeEEecCCCcccHHHHHHHHHHHhCC
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD----YRLSVAK---ELGADNIVKVSTNLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~----~~~~~~~---~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~  253 (321)
                      ..+|||+|+ |.+|...++.+...|. .|+++++++    ++.+.++   ..++.. +..+-  .+ .+.+.++.+  ..
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~~~l~~~~v~~-~~~Dl--~d-~~~l~~~~~--~~   82 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHR-PTYILARPGPRSPSKAKIFKALEDKGAII-VYGLI--NE-QEAMEKILK--EH   82 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTC-CEEEEECSSCCCHHHHHHHHHHHHTTCEE-EECCT--TC-HHHHHHHHH--HT
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCC-CEEEEECCCCCChhHHHHHHHHHhCCcEE-EEeec--CC-HHHHHHHHh--hC
Confidence            358999999 9999999999988998 577776654    4544333   334433 22221  12 223333322  13


Q ss_pred             CccEEEEcCCCH--HHHHHHHHHcccCC---EEEE
Q 020768          254 GIDVSFDCAGFN--KTMSTALSATRAGG---KVCL  283 (321)
Q Consensus       254 ~~d~vid~~g~~--~~~~~~~~~l~~~G---~~v~  283 (321)
                      ++|+||.+.+..  .....+++.++..|   +++.
T Consensus        83 ~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~  117 (346)
T 3i6i_A           83 EIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP  117 (346)
T ss_dssp             TCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred             CCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence            799999998852  12335555555544   5553

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=95.26  E-value=0.11  Score=46.65  Aligned_cols=89  Identities=15%  Similarity=0.104  Sum_probs=59.5

Q ss_pred             CEEEEEcCChhHH-HHHHHHHHc-CCCeEEEEeCChhHHH-HHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          183 TNVLIMGAGPIGL-VTMLGARAF-GAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       183 ~~vlI~Gag~vG~-~a~qla~~~-g~~~vv~v~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      -+|.|+|+|.+|. ..+..++.. ++..+.+++.+.++.+ +++++|+...       .++.    ++.+  ...+|+|+
T Consensus        28 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~-------~~~~----~ll~--~~~~D~V~   94 (350)
T 3rc1_A           28 IRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPV-------EGYP----ALLE--RDDVDAVY   94 (350)
T ss_dssp             EEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEE-------ESHH----HHHT--CTTCSEEE
T ss_pred             eEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCc-------CCHH----HHhc--CCCCCEEE
Confidence            4789999999997 556655555 6644456677776655 4567787543       1222    2221  35689999


Q ss_pred             EcCCCHHHHHHHHHHcccCCEEEEEc
Q 020768          260 DCAGFNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       260 d~~g~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      .|+....+.+.+..+|..|-. +++-
T Consensus        95 i~tp~~~h~~~~~~al~aGk~-Vl~E  119 (350)
T 3rc1_A           95 VPLPAVLHAEWIDRALRAGKH-VLAE  119 (350)
T ss_dssp             ECCCGGGHHHHHHHHHHTTCE-EEEE
T ss_pred             ECCCcHHHHHHHHHHHHCCCc-EEEe
Confidence            999988888888888876644 4454

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=95.26  E-value=0.062  Score=46.85  Aligned_cols=92  Identities=18%  Similarity=0.278  Sum_probs=53.9

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCC------hhHHHHHHH---cCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD------DYRLSVAKE---LGADNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~------~~~~~~~~~---~g~~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      ..+|+|+|+ |.+|...++.+...|. .|++++++      +++.+.++.   .|+. ++..+-  .+. +.+.+..   
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~-~v~~D~--~d~-~~l~~~~---   75 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGH-PTFLLVRESTASSNSEKAQLLESFKASGAN-IVHGSI--DDH-ASLVEAV---   75 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCCCCTTTTHHHHHHHHHHHTTTCE-EECCCT--TCH-HHHHHHH---
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCC-CEEEEECCcccccCHHHHHHHHHHHhCCCE-EEEecc--CCH-HHHHHHH---
Confidence            467999999 9999999999988998 46666665      334433332   3443 222221  222 2333332   


Q ss_pred             CCCccEEEEcCCCHH--HHHHHHHHcccC---CEEE
Q 020768          252 GTGIDVSFDCAGFNK--TMSTALSATRAG---GKVC  282 (321)
Q Consensus       252 ~~~~d~vid~~g~~~--~~~~~~~~l~~~---G~~v  282 (321)
                       .++|+||.+++...  ....+++.++..   .+++
T Consensus        76 -~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (308)
T 1qyc_A           76 -KNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFF  110 (308)
T ss_dssp             -HTCSEEEECCCGGGSGGGHHHHHHHHHHCCCSEEE
T ss_pred             -cCCCEEEECCcchhhhhHHHHHHHHHhcCCCceEe
Confidence             25999999988531  123444444332   4666

>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}

Probab=95.25  E-value=0.079  Score=47.58  Aligned_cols=89  Identities=10%  Similarity=0.071  Sum_probs=61.8

Q ss_pred             CEEEEEcCChhHHHHHHHHHHc-CCCeEEEEeCChhHHH-HHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          183 TNVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~-g~~~vv~v~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      -+|.|+|+|.+|...+..++.. +++.+.+++.++++.+ +++++|+..   +    .++.+.+    .  ...+|+|+.
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~---~----~~~~~~l----~--~~~~D~V~i   72 (354)
T 3db2_A            6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAG---D----ATMEALL----A--REDVEMVII   72 (354)
T ss_dssp             EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCC---C----SSHHHHH----H--CSSCCEEEE
T ss_pred             ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCC---c----CCHHHHh----c--CCCCCEEEE
Confidence            4789999999998877777766 6644556677777765 456677653   1    2222222    1  457999999


Q ss_pred             cCCCHHHHHHHHHHcccCCEEEEEc
Q 020768          261 CAGFNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      |+....+.+.+..++..|-. +++.
T Consensus        73 ~tp~~~h~~~~~~al~~gk~-vl~E   96 (354)
T 3db2_A           73 TVPNDKHAEVIEQCARSGKH-IYVE   96 (354)
T ss_dssp             CSCTTSHHHHHHHHHHTTCE-EEEE
T ss_pred             eCChHHHHHHHHHHHHcCCE-EEEc
Confidence            99998888888888877654 4444

>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}

Probab=95.25  E-value=0.097  Score=46.80  Aligned_cols=89  Identities=21%  Similarity=0.365  Sum_probs=60.0

Q ss_pred             EEEEEcCChhHHHHHHHHHHc-CCCeEEEEeCChhHHH-HHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 020768          184 NVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~-g~~~vv~v~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  261 (321)
                      +|.|+|+|.+|...+..++.. +...+.+++.++++.+ +++++|...+..      ++.+    +..  ...+|+|+.|
T Consensus         4 rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~------~~~~----ll~--~~~~D~V~i~   71 (344)
T 3ezy_A            4 RIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYK------DPHE----LIE--DPNVDAVLVC   71 (344)
T ss_dssp             EEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEES------SHHH----HHH--CTTCCEEEEC
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeC------CHHH----Hhc--CCCCCEEEEc
Confidence            688999999998876666554 5543445677777755 456778654332      2222    221  3579999999


Q ss_pred             CCCHHHHHHHHHHcccCCEEEEEc
Q 020768          262 AGFNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       262 ~g~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      +....+.+.+..++..|-. +++.
T Consensus        72 tp~~~h~~~~~~al~~gk~-v~~E   94 (344)
T 3ezy_A           72 SSTNTHSELVIACAKAKKH-VFCE   94 (344)
T ss_dssp             SCGGGHHHHHHHHHHTTCE-EEEE
T ss_pred             CCCcchHHHHHHHHhcCCe-EEEE
Confidence            9988888888888877644 4454

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=95.24  E-value=0.069  Score=46.76  Aligned_cols=88  Identities=11%  Similarity=0.133  Sum_probs=61.5

Q ss_pred             CEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcC
Q 020768          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  262 (321)
                      .+|.|+|+|.+|...++.+...|. .|.+.++++++.+.+.+.|+...       .+    ..++    -. .|+||.|+
T Consensus        16 ~~I~vIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~----~~~~----~~-aDvvi~~v   78 (296)
T 3qha_A           16 LKLGYIGLGNMGAPMATRMTEWPG-GVTVYDIRIEAMTPLAEAGATLA-------DS----VADV----AA-ADLIHITV   78 (296)
T ss_dssp             CCEEEECCSTTHHHHHHHHTTSTT-CEEEECSSTTTSHHHHHTTCEEC-------SS----HHHH----TT-SSEEEECC
T ss_pred             CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCEEc-------CC----HHHH----Hh-CCEEEEEC
Confidence            579999999999998888888898 58888999999888887775321       11    1121    23 79999999


Q ss_pred             CCHHHHH----HHHHHcccCCEEEEEcCC
Q 020768          263 GFNKTMS----TALSATRAGGKVCLVGMG  287 (321)
Q Consensus       263 g~~~~~~----~~~~~l~~~G~~v~~g~~  287 (321)
                      ..+..+.    .+...++++..++..+..
T Consensus        79 p~~~~~~~v~~~l~~~l~~g~ivv~~st~  107 (296)
T 3qha_A           79 LDDAQVREVVGELAGHAKPGTVIAIHSTI  107 (296)
T ss_dssp             SSHHHHHHHHHHHHTTCCTTCEEEECSCC
T ss_pred             CChHHHHHHHHHHHHhcCCCCEEEEeCCC
Confidence            8754433    334445666666666543

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=95.23  E-value=0.031  Score=49.78  Aligned_cols=34  Identities=15%  Similarity=0.035  Sum_probs=26.7

Q ss_pred             CCEEEEEcC-C--hhHHHHHHHHHHcCCCeEEEEeCCh
Q 020768          182 ETNVLIMGA-G--PIGLVTMLGARAFGAPRIVIVDVDD  216 (321)
Q Consensus       182 g~~vlI~Ga-g--~vG~~a~qla~~~g~~~vv~v~~~~  216 (321)
                      ++++||+|+ +  ++|...++.+...|+ .|+++..++
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~-~Vv~~~~~~   38 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNV-KIIFGIWPP   38 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEECHH
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecCc
Confidence            578999998 3  899999998889999 566555443

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=95.22  E-value=0.11  Score=46.56  Aligned_cols=92  Identities=15%  Similarity=0.096  Sum_probs=61.4

Q ss_pred             CEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcC
Q 020768          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  262 (321)
                      .+|.|+|.|.+|...+..++..|. .|++.++++++.+.+.++|+...       .+..+.+.+.    ....|+||-|+
T Consensus         9 ~kIgIIG~G~mG~slA~~L~~~G~-~V~~~dr~~~~~~~a~~~G~~~~-------~~~~e~~~~a----~~~aDlVilav   76 (341)
T 3ktd_A            9 RPVCILGLGLIGGSLLRDLHAANH-SVFGYNRSRSGAKSAVDEGFDVS-------ADLEATLQRA----AAEDALIVLAV   76 (341)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHTTCCEE-------SCHHHHHHHH----HHTTCEEEECS
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeee-------CCHHHHHHhc----ccCCCEEEEeC
Confidence            579999999999999999999998 68999999999999999987431       1222222221    12468888888


Q ss_pred             CCHHHHHHHHHH---cccCCEEEEEcCC
Q 020768          263 GFNKTMSTALSA---TRAGGKVCLVGMG  287 (321)
Q Consensus       263 g~~~~~~~~~~~---l~~~G~~v~~g~~  287 (321)
                      .. ......++.   ++++..++.++..
T Consensus        77 P~-~~~~~vl~~l~~~~~~~iv~Dv~Sv  103 (341)
T 3ktd_A           77 PM-TAIDSLLDAVHTHAPNNGFTDVVSV  103 (341)
T ss_dssp             CH-HHHHHHHHHHHHHCTTCCEEECCSC
T ss_pred             CH-HHHHHHHHHHHccCCCCEEEEcCCC
Confidence            84 333333322   2455555555543

>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}

Probab=95.20  E-value=0.11  Score=46.36  Aligned_cols=91  Identities=15%  Similarity=0.121  Sum_probs=62.6

Q ss_pred             EEEEEcCChhHHH-HHHHHHHc-CCCeEEEEeCChhHHH-HHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          184 NVLIMGAGPIGLV-TMLGARAF-GAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       184 ~vlI~Gag~vG~~-a~qla~~~-g~~~vv~v~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      ++.|+|+|.+|.. .+...+.. +++.+.+++.++++.+ +++++|...+..      ++.+    +.+  ...+|+|+-
T Consensus        25 rigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~------d~~e----ll~--~~~iDaV~I   92 (350)
T 4had_A           25 RFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFG------SYEE----MLA--SDVIDAVYI   92 (350)
T ss_dssp             EEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEES------SHHH----HHH--CSSCSEEEE
T ss_pred             EEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeC------CHHH----Hhc--CCCCCEEEE
Confidence            7999999999975 35555544 6644555677777654 567899865532      3332    222  467999999


Q ss_pred             cCCCHHHHHHHHHHcccCCEEEEEcCC
Q 020768          261 CAGFNKTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      |+....+.+.+..+|+. |+=+++--+
T Consensus        93 ~tP~~~H~~~~~~al~a-GkhVl~EKP  118 (350)
T 4had_A           93 PLPTSQHIEWSIKAADA-GKHVVCEKP  118 (350)
T ss_dssp             CSCGGGHHHHHHHHHHT-TCEEEECSC
T ss_pred             eCCCchhHHHHHHHHhc-CCEEEEeCC
Confidence            99998888888888875 455666644

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=95.20  E-value=0.058  Score=48.54  Aligned_cols=91  Identities=21%  Similarity=0.309  Sum_probs=62.8

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      .|.+|.|+|.|.+|...++.++.+|+ .|++.+++.++ +..+++|+..+       .++.+.+        ...|+|+.
T Consensus       167 ~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~~-------~~l~ell--------~~aDvV~l  229 (347)
T 1mx3_A          167 RGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLSD-GVERALGLQRV-------STLQDLL--------FHSDCVTL  229 (347)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCT-THHHHHTCEEC-------SSHHHHH--------HHCSEEEE
T ss_pred             CCCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcch-hhHhhcCCeec-------CCHHHHH--------hcCCEEEE
Confidence            46799999999999999999999999 68888776544 23456676321       1222222        13699999


Q ss_pred             cCCCHH----HH-HHHHHHcccCCEEEEEcCCC
Q 020768          261 CAGFNK----TM-STALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       261 ~~g~~~----~~-~~~~~~l~~~G~~v~~g~~~  288 (321)
                      ++....    .+ ...+..++++..++.++...
T Consensus       230 ~~P~t~~t~~li~~~~l~~mk~gailIN~arg~  262 (347)
T 1mx3_A          230 HCGLNEHNHHLINDFTVKQMRQGAFLVNTARGG  262 (347)
T ss_dssp             CCCCCTTCTTSBSHHHHTTSCTTEEEEECSCTT
T ss_pred             cCCCCHHHHHHhHHHHHhcCCCCCEEEECCCCh
Confidence            876531    22 45677888888888887443

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=95.16  E-value=0.07  Score=48.27  Aligned_cols=86  Identities=24%  Similarity=0.296  Sum_probs=62.2

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  261 (321)
                      |.+|.|+|.|.+|...++.++.+|+ .|++.+++. +.+.+.+.|+..        .++.    ++.    ...|+|+-+
T Consensus       176 gktvGIIGlG~IG~~vA~~l~~fG~-~V~~~d~~~-~~~~~~~~g~~~--------~~l~----ell----~~aDvV~l~  237 (365)
T 4hy3_A          176 GSEIGIVGFGDLGKALRRVLSGFRA-RIRVFDPWL-PRSMLEENGVEP--------ASLE----DVL----TKSDFIFVV  237 (365)
T ss_dssp             SSEEEEECCSHHHHHHHHHHTTSCC-EEEEECSSS-CHHHHHHTTCEE--------CCHH----HHH----HSCSEEEEC
T ss_pred             CCEEEEecCCcccHHHHHhhhhCCC-EEEEECCCC-CHHHHhhcCeee--------CCHH----HHH----hcCCEEEEc
Confidence            7799999999999999999999999 688888774 444556667531        1222    221    247999987


Q ss_pred             CCCHH----HH-HHHHHHcccCCEEEEEc
Q 020768          262 AGFNK----TM-STALSATRAGGKVCLVG  285 (321)
Q Consensus       262 ~g~~~----~~-~~~~~~l~~~G~~v~~g  285 (321)
                      +....    .+ ...+..+++++.++.++
T Consensus       238 ~Plt~~T~~li~~~~l~~mk~gailIN~a  266 (365)
T 4hy3_A          238 AAVTSENKRFLGAEAFSSMRRGAAFILLS  266 (365)
T ss_dssp             SCSSCC---CCCHHHHHTSCTTCEEEECS
T ss_pred             CcCCHHHHhhcCHHHHhcCCCCcEEEECc
Confidence            76421    12 46678899999999888

>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}

Probab=95.15  E-value=0.17  Score=44.79  Aligned_cols=107  Identities=17%  Similarity=0.116  Sum_probs=70.0

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHH-cCCCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHH
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARA-FGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQ  248 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~-~g~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~  248 (321)
                      .+...-+...+++|+|+|..|...+..+.. .+...|.+.+++ +..+++++    +|......      +..+.+    
T Consensus       113 a~~La~~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~-~a~~la~~l~~~~g~~~~~~------~~~eav----  181 (313)
T 3hdj_A          113 AGALARPRSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY-ASPEILERIGRRCGVPARMA------APADIA----  181 (313)
T ss_dssp             HHHHSCTTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT-CCHHHHHHHHHHHTSCEEEC------CHHHHH----
T ss_pred             HHhhccCCCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc-HHHHHHHHHHHhcCCeEEEe------CHHHHH----
Confidence            344444567899999999999888876665 577788888888 55555554    46542221      222222    


Q ss_pred             HHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-Cccccch
Q 020768          249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLT  296 (321)
Q Consensus       249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~  296 (321)
                          .+.|+|+.|++....+- -...++++..++.+|...+ ..+++..
T Consensus       182 ----~~aDIVi~aT~s~~pvl-~~~~l~~G~~V~~vGs~~p~~~El~~~  225 (313)
T 3hdj_A          182 ----AQADIVVTATRSTTPLF-AGQALRAGAFVGAIGSSLPHTRELDDE  225 (313)
T ss_dssp             ----HHCSEEEECCCCSSCSS-CGGGCCTTCEEEECCCSSTTCCCCCHH
T ss_pred             ----hhCCEEEEccCCCCccc-CHHHcCCCcEEEECCCCCCchhhcCHH
Confidence                24899999998743111 1356899999999997644 3466655

>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*

Probab=95.15  E-value=0.07  Score=45.89  Aligned_cols=97  Identities=19%  Similarity=0.230  Sum_probs=63.7

Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHc---CCCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHH
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAF---GAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKA  250 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~---g~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~~  250 (321)
                      .+++|.+||=+|+|. |..+..+++..   |+ .|++++.+++-++.+++    .+...-+.+...  +..    ++   
T Consensus        67 ~~~~~~~vLDlGcGt-G~~~~~la~~~~~~~~-~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~--D~~----~~---  135 (261)
T 4gek_A           67 FVQPGTQVYDLGCSL-GAATLSVRRNIHHDNC-KIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEG--DIR----DI---  135 (261)
T ss_dssp             HCCTTCEEEEETCTT-THHHHHHHHTCCSSSC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES--CTT----TC---
T ss_pred             hCCCCCEEEEEeCCC-CHHHHHHHHhcCCCCC-EEEEEECCHHHHHHHHHHHHhhccCceEEEeec--ccc----cc---
Confidence            378999999999854 67777788764   55 79999999988877764    343221111111  110    11   


Q ss_pred             hCCCccEEEEcCCC--------HHHHHHHHHHcccCCEEEEEc
Q 020768          251 MGTGIDVSFDCAGF--------NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       251 ~~~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      ....+|+|+-...-        ...+..+.+.|+|||++++.-
T Consensus       136 ~~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e  178 (261)
T 4gek_A          136 AIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSE  178 (261)
T ss_dssp             CCCSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEe
Confidence            12458888764321        135788999999999998864

>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}

Probab=95.15  E-value=0.15  Score=45.14  Aligned_cols=96  Identities=14%  Similarity=0.084  Sum_probs=63.7

Q ss_pred             CEEEEEcCChhHHHHHHHHHHc-CCCeEEEEeCChhHHHHHHH-cCCC---eEEecCCCcccHHHHHHHHHHHhCCCccE
Q 020768          183 TNVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKE-LGAD---NIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~-g~~~vv~v~~~~~~~~~~~~-~g~~---~vi~~~~~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      .+||++|+|. |.++..+++.. +. .+.+++.+++-.+.+++ ++..   .+-...   .|..+.+..   .....||+
T Consensus        91 ~rVLdIG~G~-G~la~~la~~~p~~-~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~---~Da~~~l~~---~~~~~fDv  162 (317)
T 3gjy_A           91 LRITHLGGGA-CTMARYFADVYPQS-RNTVVELDAELARLSREWFDIPRAPRVKIRV---DDARMVAES---FTPASRDV  162 (317)
T ss_dssp             CEEEEESCGG-GHHHHHHHHHSTTC-EEEEEESCHHHHHHHHHHSCCCCTTTEEEEE---SCHHHHHHT---CCTTCEEE
T ss_pred             CEEEEEECCc-CHHHHHHHHHCCCc-EEEEEECCHHHHHHHHHhccccCCCceEEEE---CcHHHHHhh---ccCCCCCE
Confidence            3899999754 67777888865 55 79999999999999886 4321   111111   233333222   11357999


Q ss_pred             EEEcCCC----------HHHHHHHHHHcccCCEEEEEcC
Q 020768          258 SFDCAGF----------NKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       258 vid~~g~----------~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      ||-....          .+.++.+.+.|+++|.++....
T Consensus       163 Ii~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~  201 (317)
T 3gjy_A          163 IIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG  201 (317)
T ss_dssp             EEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence            9864321          3568899999999999887653

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=95.13  E-value=0.23  Score=42.62  Aligned_cols=90  Identities=13%  Similarity=0.098  Sum_probs=62.5

Q ss_pred             CEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcC
Q 020768          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  262 (321)
                      .+|||+|+|.+|...+..+...|. .|+++++++++.+.+...++..+. .+-  .++.          -.++|+||.++
T Consensus         6 ~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~-~D~--~d~~----------~~~~d~vi~~a   71 (286)
T 3ius_A            6 GTLLSFGHGYTARVLSRALAPQGW-RIIGTSRNPDQMEAIRASGAEPLL-WPG--EEPS----------LDGVTHLLIST   71 (286)
T ss_dssp             CEEEEETCCHHHHHHHHHHGGGTC-EEEEEESCGGGHHHHHHTTEEEEE-SSS--SCCC----------CTTCCEEEECC
T ss_pred             CcEEEECCcHHHHHHHHHHHHCCC-EEEEEEcChhhhhhHhhCCCeEEE-ecc--cccc----------cCCCCEEEECC
Confidence            589999999999999999988898 688888998888777766654332 221  1211          25789999998


Q ss_pred             CCH----HHHHHHHHHccc----CCEEEEEcC
Q 020768          263 GFN----KTMSTALSATRA----GGKVCLVGM  286 (321)
Q Consensus       263 g~~----~~~~~~~~~l~~----~G~~v~~g~  286 (321)
                      +..    .....+++.++.    -.+++.++.
T Consensus        72 ~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss  103 (286)
T 3ius_A           72 APDSGGDPVLAALGDQIAARAAQFRWVGYLST  103 (286)
T ss_dssp             CCBTTBCHHHHHHHHHHHHTGGGCSEEEEEEE
T ss_pred             CccccccHHHHHHHHHHHhhcCCceEEEEeec
Confidence            742    223455555543    268888774

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=95.11  E-value=0.1  Score=45.80  Aligned_cols=75  Identities=15%  Similarity=0.163  Sum_probs=45.7

Q ss_pred             CCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccE
Q 020768          179 IGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       179 ~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      .++..+|||+|+ |.+|...++.+...|. .|++++++.++ +.   +++. .+..+-  .+ .+.+.++.+  +.++|+
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~-~~---l~~~-~~~~Dl--~d-~~~~~~~~~--~~~~d~   77 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNV-EVFGTSRNNEA-KL---PNVE-MISLDI--MD-SQRVKKVIS--DIKPDY   77 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCTTC-CC---TTEE-EEECCT--TC-HHHHHHHHH--HHCCSE
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCC-EEEEEecCCcc-cc---ceee-EEECCC--CC-HHHHHHHHH--hcCCCE
Confidence            355678999998 9999999999888898 68888777654 21   2222 222221  12 122333322  235899


Q ss_pred             EEEcCCC
Q 020768          258 SFDCAGF  264 (321)
Q Consensus       258 vid~~g~  264 (321)
                      ||.+++.
T Consensus        78 vih~A~~   84 (321)
T 2pk3_A           78 IFHLAAK   84 (321)
T ss_dssp             EEECCSC
T ss_pred             EEEcCcc
Confidence            9999874

>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}

Probab=95.11  E-value=0.14  Score=44.62  Aligned_cols=105  Identities=18%  Similarity=0.215  Sum_probs=66.7

Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHc-CCCeEEEEeCChhHHHHHHHc-----C-CCeEEecCCCcccHHHHHHHHHHH
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKEL-----G-ADNIVKVSTNLQDIAEEVEKIQKA  250 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~-g~~~vv~v~~~~~~~~~~~~~-----g-~~~vi~~~~~~~~~~~~~~~~~~~  250 (321)
                      ..+++.+||=+|+|. |..+..+++.. ....+++++.+++..+.+++.     + ...+.....+..++.  .......
T Consensus        33 ~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~~~  109 (299)
T 3g5t_A           33 HDGERKLLVDVGCGP-GTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFK--FLGADSV  109 (299)
T ss_dssp             CCSCCSEEEEETCTT-THHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCG--GGCTTTT
T ss_pred             hcCCCCEEEEECCCC-CHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCC--ccccccc
Confidence            346889999999864 88888999865 455899999999888887763     1 222211111111110  0000000


Q ss_pred             hCCCccEEEEcCCC-----HHHHHHHHHHcccCCEEEEEc
Q 020768          251 MGTGIDVSFDCAGF-----NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       251 ~~~~~d~vid~~g~-----~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      ..+.+|+|+....-     ...+..+.+.|++||.+++..
T Consensus       110 ~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i~~  149 (299)
T 3g5t_A          110 DKQKIDMITAVECAHWFDFEKFQRSAYANLRKDGTIAIWG  149 (299)
T ss_dssp             TSSCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cCCCeeEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEEEe
Confidence            01579999975431     457889999999999998854

>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*

Probab=95.10  E-value=0.088  Score=47.04  Aligned_cols=87  Identities=16%  Similarity=0.147  Sum_probs=61.4

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      .|.+|.|+|.|.+|...++.++.+|+ .|++.+++.++.  +++. +..    .   .++.+.+        ...|+|+.
T Consensus       145 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~--~~~~-~~~----~---~~l~ell--------~~aDvV~l  205 (333)
T 1j4a_A          145 RDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRNPE--LEKK-GYY----V---DSLDDLY--------KQADVISL  205 (333)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHH--HHHT-TCB----C---SCHHHHH--------HHCSEEEE
T ss_pred             CCCEEEEEccCHHHHHHHHHHHHCCC-EEEEECCCcchh--HHhh-Cee----c---CCHHHHH--------hhCCEEEE
Confidence            36789999999999999999999999 688888877654  2332 321    1   1222222        13699999


Q ss_pred             cCCCHH-H---H-HHHHHHcccCCEEEEEcC
Q 020768          261 CAGFNK-T---M-STALSATRAGGKVCLVGM  286 (321)
Q Consensus       261 ~~g~~~-~---~-~~~~~~l~~~G~~v~~g~  286 (321)
                      ++.... +   + ...+..+++++.++.++.
T Consensus       206 ~~p~~~~t~~li~~~~l~~mk~ga~lIn~ar  236 (333)
T 1j4a_A          206 HVPDVPANVHMINDESIAKMKQDVVIVNVSR  236 (333)
T ss_dssp             CSCCCGGGTTCBSHHHHHHSCTTEEEEECSC
T ss_pred             cCCCcHHHHHHHhHHHHhhCCCCcEEEECCC
Confidence            988532 1   2 356788999999988875

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=95.10  E-value=0.065  Score=45.41  Aligned_cols=99  Identities=14%  Similarity=0.264  Sum_probs=68.0

Q ss_pred             cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCe-EEecCCCcccHHHHHHHHHHHh
Q 020768          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADN-IVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~-vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      ..++++.+||-+|+|. |..+..+++..+. .+++++.+++..+.+++    .|... +.....+..++.        ..
T Consensus        42 ~~~~~~~~vLDiG~G~-G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--------~~  111 (257)
T 3f4k_A           42 NELTDDAKIADIGCGT-GGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLP--------FQ  111 (257)
T ss_dssp             CCCCTTCEEEEETCTT-SHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCS--------SC
T ss_pred             hcCCCCCeEEEeCCCC-CHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCC--------CC
Confidence            3678899999999875 8888899998876 89999999988777654    34332 111111111110        01


Q ss_pred             CCCccEEEEc-----CCCHHHHHHHHHHcccCCEEEEEc
Q 020768          252 GTGIDVSFDC-----AGFNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       252 ~~~~d~vid~-----~g~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      ...+|+|+..     ..-...+..+.+.|+++|++++..
T Consensus       112 ~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~  150 (257)
T 3f4k_A          112 NEELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSE  150 (257)
T ss_dssp             TTCEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             CCCEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEE
Confidence            3579999753     223457889999999999998875

>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}

Probab=95.09  E-value=0.086  Score=47.11  Aligned_cols=89  Identities=21%  Similarity=0.141  Sum_probs=59.9

Q ss_pred             CEEEEEcCChhHHHHHHHHHHc-CCCeEEEEeCChhHHHH-HHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          183 TNVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLSV-AKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~-g~~~vv~v~~~~~~~~~-~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      -+|.|+|+|.+|...+..++.. +.+.+.+++.++++.+. ++++|+. ..      .++.    ++.  ....+|+|+.
T Consensus         5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~-~~------~~~~----~~l--~~~~~D~V~i   71 (344)
T 3euw_A            5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAE-AV------ASPD----EVF--ARDDIDGIVI   71 (344)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCE-EE------SSHH----HHT--TCSCCCEEEE
T ss_pred             eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCc-ee------CCHH----HHh--cCCCCCEEEE
Confidence            3789999999998888777765 66444467777777554 5667732 22      1222    221  1357899999


Q ss_pred             cCCCHHHHHHHHHHcccCCEEEEEc
Q 020768          261 CAGFNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      |+....+.+.+..++..|-. +++.
T Consensus        72 ~tp~~~h~~~~~~al~~gk~-v~~E   95 (344)
T 3euw_A           72 GSPTSTHVDLITRAVERGIP-ALCE   95 (344)
T ss_dssp             CSCGGGHHHHHHHHHHTTCC-EEEC
T ss_pred             eCCchhhHHHHHHHHHcCCc-EEEE
Confidence            99988888888888876644 4444

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=95.08  E-value=0.078  Score=46.89  Aligned_cols=79  Identities=18%  Similarity=0.166  Sum_probs=47.8

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHH--HHHHHcCC-CeEEecCCCcccHHHHHHHHHHHhCCCccE
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRL--SVAKELGA-DNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~--~~~~~~g~-~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      +.+|||+|+ |.+|...++.+...|. .|++++++.++.  +.++.++. ..+..+..+-.+. +.+.++.+  +.++|+
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~--~~~~d~   78 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGY-EVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEF-SNIIRTIE--KVQPDE   78 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCH-HHHHHHHH--HHCCSE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCCcccccccHhhccccCceeEEECCCCCH-HHHHHHHH--hcCCCE
Confidence            578999999 9999999988888898 688887775442  23344431 1111111111222 22333322  125899


Q ss_pred             EEEcCCC
Q 020768          258 SFDCAGF  264 (321)
Q Consensus       258 vid~~g~  264 (321)
                      ||.+++.
T Consensus        79 vih~A~~   85 (345)
T 2z1m_A           79 VYNLAAQ   85 (345)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999884

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=95.02  E-value=0.22  Score=43.20  Aligned_cols=84  Identities=18%  Similarity=0.116  Sum_probs=57.4

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCC
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  263 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  263 (321)
                      +|.|+|+|.+|...+..+...|. .|.+.++++++.+.+.+.|+..   .    .+..+.+        ...|+||.|+.
T Consensus         2 ~i~iiG~G~mG~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~----~~~~~~~--------~~~Dvvi~~vp   65 (296)
T 2gf2_A            2 PVGFIGLGNMGNPMAKNLMKHGY-PLIIYDVFPDACKEFQDAGEQV---V----SSPADVA--------EKADRIITMLP   65 (296)
T ss_dssp             CEEEECCSTTHHHHHHHHHHTTC-CEEEECSSTHHHHHHHTTTCEE---C----SSHHHHH--------HHCSEEEECCS
T ss_pred             eEEEEeccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCee---c----CCHHHHH--------hcCCEEEEeCC
Confidence            58899999999998888888898 5888889888888777766431   1    1222221        13699999987


Q ss_pred             CHHHHHHHHH-------HcccCCEEEE
Q 020768          264 FNKTMSTALS-------ATRAGGKVCL  283 (321)
Q Consensus       264 ~~~~~~~~~~-------~l~~~G~~v~  283 (321)
                      .+......+.       .++++..++.
T Consensus        66 ~~~~~~~v~~~~~~~~~~l~~~~~vv~   92 (296)
T 2gf2_A           66 TSINAIEAYSGANGILKKVKKGSLLID   92 (296)
T ss_dssp             SHHHHHHHHHSTTSGGGTCCTTCEEEE
T ss_pred             CHHHHHHHHhCchhHHhcCCCCCEEEE
Confidence            6666666554       2345555555

>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}

Probab=95.01  E-value=0.09  Score=43.31  Aligned_cols=100  Identities=20%  Similarity=0.221  Sum_probs=66.6

Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccE
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      ...++.+||=+|+|. |..+..+++. |. .+++++.+++..+.+++.+...++..     +..+ +..........+|+
T Consensus        49 ~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~-----~~~~-~~~~~~~~~~~fD~  119 (227)
T 3e8s_A           49 LGRQPERVLDLGCGE-GWLLRALADR-GI-EAVGVDGDRTLVDAARAAGAGEVHLA-----SYAQ-LAEAKVPVGKDYDL  119 (227)
T ss_dssp             HHTCCSEEEEETCTT-CHHHHHHHTT-TC-EEEEEESCHHHHHHHHHTCSSCEEEC-----CHHH-HHTTCSCCCCCEEE
T ss_pred             hcCCCCEEEEeCCCC-CHHHHHHHHC-CC-EEEEEcCCHHHHHHHHHhcccccchh-----hHHh-hcccccccCCCccE
Confidence            345678999998854 5666666666 76 79999999999999988754333321     2111 10000111345999


Q ss_pred             EEEcCC-----CHHHHHHHHHHcccCCEEEEEcC
Q 020768          258 SFDCAG-----FNKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       258 vid~~g-----~~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      |+....     -...+..+.+.|+++|++++...
T Consensus       120 v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~  153 (227)
T 3e8s_A          120 ICANFALLHQDIIELLSAMRTLLVPGGALVIQTL  153 (227)
T ss_dssp             EEEESCCCSSCCHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             EEECchhhhhhHHHHHHHHHHHhCCCeEEEEEec
Confidence            987532     23678899999999999998764

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=95.01  E-value=0.15  Score=43.56  Aligned_cols=87  Identities=10%  Similarity=0.097  Sum_probs=57.3

Q ss_pred             CEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH-cCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 020768          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  261 (321)
                      -+|.|+|+|.+|...++.+...|.+.|.+.++++++.+.+.+ +|....-+       ..    +    .-...|+||.|
T Consensus        11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~-------~~----~----~~~~~Dvvi~a   75 (266)
T 3d1l_A           11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTD-------LA----E----VNPYAKLYIVS   75 (266)
T ss_dssp             CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESC-------GG----G----SCSCCSEEEEC
T ss_pred             CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCC-------HH----H----HhcCCCEEEEe
Confidence            479999999999988888888898547788888888776554 56532111       10    0    02358999999


Q ss_pred             CCCHHHHHHHHHH----cccCCEEEEEc
Q 020768          262 AGFNKTMSTALSA----TRAGGKVCLVG  285 (321)
Q Consensus       262 ~g~~~~~~~~~~~----l~~~G~~v~~g  285 (321)
                      +..+. ....++.    ++++..++.+.
T Consensus        76 v~~~~-~~~v~~~l~~~~~~~~ivv~~s  102 (266)
T 3d1l_A           76 LKDSA-FAELLQGIVEGKREEALMVHTA  102 (266)
T ss_dssp             CCHHH-HHHHHHHHHTTCCTTCEEEECC
T ss_pred             cCHHH-HHHHHHHHHhhcCCCcEEEECC
Confidence            99753 3444443    33555555554

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=94.99  E-value=0.095  Score=46.24  Aligned_cols=80  Identities=16%  Similarity=0.057  Sum_probs=46.0

Q ss_pred             CCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhH--HHHHHHcC--CC-eEEecCCCcccHHHHHHHHHHHhC
Q 020768          179 IGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYR--LSVAKELG--AD-NIVKVSTNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       179 ~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~--~~~~~~~g--~~-~vi~~~~~~~~~~~~~~~~~~~~~  252 (321)
                      -.++.+|||+|+ |.+|...++.+...|. .|++++++.++  .+.++.+.  .. .++..+-  .+. +.+.++.+  +
T Consensus        11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl--~d~-~~~~~~~~--~   84 (335)
T 1rpn_A           11 GSMTRSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGIEGDIQYEDGDM--ADA-CSVQRAVI--K   84 (335)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTCGGGEEEEECCT--TCH-HHHHHHHH--H
T ss_pred             cccCCeEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCCccccccchhhccccCceEEEECCC--CCH-HHHHHHHH--H
Confidence            467889999998 9999999998888898 67777776543  12233331  11 1222211  121 22333322  1


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      .++|+||.+++.
T Consensus        85 ~~~d~Vih~A~~   96 (335)
T 1rpn_A           85 AQPQEVYNLAAQ   96 (335)
T ss_dssp             HCCSEEEECCSC
T ss_pred             cCCCEEEECccc
Confidence            258999999874

>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}

Probab=94.95  E-value=0.12  Score=46.80  Aligned_cols=91  Identities=18%  Similarity=0.168  Sum_probs=58.5

Q ss_pred             CEEEEEcCChhHHHHHHHHHHc--------CCCeEEEEeCChhHHH-HHHHcCCCeEEecCCCcccHHHHHHHHHHHhCC
Q 020768          183 TNVLIMGAGPIGLVTMLGARAF--------GAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~--------g~~~vv~v~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~  253 (321)
                      =+|.|+|+|.+|...+...+.+        +++.+.+++.++++.+ +++++|...+..      ++.+.+    +  ..
T Consensus        26 irvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~------d~~ell----~--~~   93 (393)
T 4fb5_A           26 LGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATA------DWRALI----A--DP   93 (393)
T ss_dssp             CEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEES------CHHHHH----H--CT
T ss_pred             ccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecC------CHHHHh----c--CC
Confidence            3799999999997655443322        4544556677766655 567899875432      333322    2  46


Q ss_pred             CccEEEEcCCCHHHHHHHHHHcccCCEEEEEcC
Q 020768          254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       254 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      .+|+|+-|+....+.+.+..+|+. |+=+++--
T Consensus        94 ~iDaV~IatP~~~H~~~a~~al~a-GkhVl~EK  125 (393)
T 4fb5_A           94 EVDVVSVTTPNQFHAEMAIAALEA-GKHVWCEK  125 (393)
T ss_dssp             TCCEEEECSCGGGHHHHHHHHHHT-TCEEEECS
T ss_pred             CCcEEEECCChHHHHHHHHHHHhc-CCeEEEcc
Confidence            799999999988887777777775 44455553

>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*

Probab=94.93  E-value=0.11  Score=45.97  Aligned_cols=99  Identities=15%  Similarity=0.137  Sum_probs=63.8

Q ss_pred             CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 020768          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  261 (321)
                      -++.|+|+ |.+|...+...+..+...+.+++.++++....+.++......   +.+++.+.+.++.. ....+|+|+.|
T Consensus         4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~---~~~~ll~~~~~l~~-~~~~vD~V~I~   79 (312)
T 3o9z_A            4 TRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEFFT---EPEAFEAYLEDLRD-RGEGVDYLSIA   79 (312)
T ss_dssp             CEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEES---CHHHHHHHHHHHHH-TTCCCSEEEEC
T ss_pred             eEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCceeC---CHHHHHHHhhhhcc-cCCCCcEEEEC
Confidence            37899999 679988888888888865666777776644444444333321   11222222222221 25689999999


Q ss_pred             CCCHHHHHHHHHHcccCCEEEEEcC
Q 020768          262 AGFNKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       262 ~g~~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      +....+.+.+..+|+.|=. +++--
T Consensus        80 tP~~~H~~~~~~al~aGkh-Vl~EK  103 (312)
T 3o9z_A           80 SPNHLHYPQIRMALRLGAN-ALSEK  103 (312)
T ss_dssp             SCGGGHHHHHHHHHHTTCE-EEECS
T ss_pred             CCchhhHHHHHHHHHCCCe-EEEEC
Confidence            9998888888888887644 55553

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=94.91  E-value=0.22  Score=43.68  Aligned_cols=108  Identities=14%  Similarity=0.080  Sum_probs=71.8

Q ss_pred             CEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcC
Q 020768          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  262 (321)
                      ++|-++|.|.+|...+.-+...|+ .|.+-++++++.+.+.+.|+...-       +    ..++    -...|+||-|+
T Consensus         4 ~kIgfIGlG~MG~~mA~~L~~~G~-~v~v~dr~~~~~~~l~~~Ga~~a~-------s----~~e~----~~~~dvv~~~l   67 (300)
T 3obb_A            4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAAGASAAR-------S----ARDA----VQGADVVISML   67 (300)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEECS-------S----HHHH----HTTCSEEEECC
T ss_pred             CEEEEeeehHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHcCCEEcC-------C----HHHH----HhcCCceeecC
Confidence            478999999999887777777898 689999999999998888864321       1    1122    13578899888


Q ss_pred             CCHHHHHHHHH-------HcccCCEEEEEcCCCCCccccchh-hhccceEEE
Q 020768          263 GFNKTMSTALS-------ATRAGGKVCLVGMGHLEMTVPLTP-AAARYLIYS  306 (321)
Q Consensus       263 g~~~~~~~~~~-------~l~~~G~~v~~g~~~~~~~~~~~~-~~~k~~~i~  306 (321)
                      .++...+..+.       .++++..++..+...+.....+.. +-.+++.+.
T Consensus        68 ~~~~~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~l  119 (300)
T 3obb_A           68 PASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAML  119 (300)
T ss_dssp             SCHHHHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEE
T ss_pred             CchHHHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence            88777666553       345566677776554443333333 334455443

>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}

Probab=94.89  E-value=0.14  Score=47.08  Aligned_cols=91  Identities=22%  Similarity=0.209  Sum_probs=61.8

Q ss_pred             CEEEEEcCChhHHHHHHHHHHc---------CCCeEEEEeCChhHHH-HHHHcCCCeEEecCCCcccHHHHHHHHHHHhC
Q 020768          183 TNVLIMGAGPIGLVTMLGARAF---------GAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~---------g~~~vv~v~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~  252 (321)
                      =+|.|+|+|.+|...+...+..         +++.+.+++.++++.+ +++++|...+..      ++.+    +.+  .
T Consensus        27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y~------d~~~----ll~--~   94 (412)
T 4gqa_A           27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYG------DWRE----LVN--D   94 (412)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEES------SHHH----HHH--C
T ss_pred             ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEEC------CHHH----Hhc--C
Confidence            3789999999998776666543         3444555677777655 567888865532      3333    222  4


Q ss_pred             CCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcC
Q 020768          253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      ..+|+|+-|+....+.+.+..+|+.| +=+++--
T Consensus        95 ~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~EK  127 (412)
T 4gqa_A           95 PQVDVVDITSPNHLHYTMAMAAIAAG-KHVYCEK  127 (412)
T ss_dssp             TTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEES
T ss_pred             CCCCEEEECCCcHHHHHHHHHHHHcC-CCeEeec
Confidence            67999999999888888888888765 4455543

>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}

Probab=94.88  E-value=0.026  Score=49.39  Aligned_cols=45  Identities=27%  Similarity=0.338  Sum_probs=37.0

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHc
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL  225 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~  225 (321)
                      .++.+||=+|+|. |..++.+++..+...|+++|.+++-.+.+++.
T Consensus        45 ~~~~~VLDiGCG~-G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~   89 (292)
T 3g07_A           45 FRGRDVLDLGCNV-GHLTLSIACKWGPSRMVGLDIDSRLIHSARQN   89 (292)
T ss_dssp             TTTSEEEEESCTT-CHHHHHHHHHTCCSEEEEEESCHHHHHHHHHT
T ss_pred             cCCCcEEEeCCCC-CHHHHHHHHHcCCCEEEEECCCHHHHHHHHHH
Confidence            4678999999864 78888889988666899999999988888764

>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*

Probab=94.86  E-value=0.16  Score=42.34  Aligned_cols=99  Identities=15%  Similarity=0.102  Sum_probs=65.0

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      ++.+||=+|+|. |..++.+|+......+++++.+++..+.++    +.|.+.+....   .|..+.+....  ....+|
T Consensus        34 ~~~~vLDiGcG~-G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~---~Da~~~l~~~~--~~~~~d  107 (218)
T 3dxy_A           34 EAPVTLEIGFGM-GASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMC---HDAVEVLHKMI--PDNSLR  107 (218)
T ss_dssp             CCCEEEEESCTT-CHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEEC---SCHHHHHHHHS--CTTCEE
T ss_pred             CCCeEEEEeeeC-hHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEE---CCHHHHHHHHc--CCCChh
Confidence            567777778754 777788888765447999999998776654    34555433222   23333222211  245688


Q ss_pred             EEEEcCCCH--------------HHHHHHHHHcccCCEEEEEc
Q 020768          257 VSFDCAGFN--------------KTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       257 ~vid~~g~~--------------~~~~~~~~~l~~~G~~v~~g  285 (321)
                      .|+-....+              ..+..+.+.|++||.+++..
T Consensus       108 ~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t  150 (218)
T 3dxy_A          108 MVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT  150 (218)
T ss_dssp             EEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             eEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence            888653322              47889999999999988765

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=94.84  E-value=0.14  Score=45.15  Aligned_cols=34  Identities=15%  Similarity=0.175  Sum_probs=27.9

Q ss_pred             CCCEEEEEcC---ChhHHHHHHHHHHcCCCeEEEEeCC
Q 020768          181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVD  215 (321)
Q Consensus       181 ~g~~vlI~Ga---g~vG~~a~qla~~~g~~~vv~v~~~  215 (321)
                      .|+++||+|+   +++|...++.+...|+ .|++++++
T Consensus         8 ~gk~~lVTGa~~s~GIG~aia~~la~~G~-~Vv~~~r~   44 (315)
T 2o2s_A            8 RGQTAFVAGVADSHGYGWAIAKHLASAGA-RVALGTWP   44 (315)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHTTTC-EEEEEECH
T ss_pred             CCCEEEEeCCCCCCChHHHHHHHHHHCCC-EEEEEecc
Confidence            4788999985   8999999998888999 57777653

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=94.84  E-value=0.074  Score=46.73  Aligned_cols=92  Identities=14%  Similarity=0.258  Sum_probs=54.8

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCCh------hHHHHHH---HcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD------YRLSVAK---ELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~------~~~~~~~---~~g~~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      ..+|||+|+ |.+|...++.+...|. .|++++++.      ++.+.++   ..++.. +..+-  .+ .+.+.+..   
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~-v~~D~--~d-~~~l~~a~---   75 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSH-PTFIYARPLTPDSTPSSVQLREEFRSMGVTI-IEGEM--EE-HEKMVSVL---   75 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTC-CEEEEECCCCTTCCHHHHHHHHHHHHTTCEE-EECCT--TC-HHHHHHHH---
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCC-cEEEEECCcccccChHHHHHHHHhhcCCcEE-EEecC--CC-HHHHHHHH---
Confidence            357999998 9999999999888898 466666654      3443332   334432 22221  12 22343332   


Q ss_pred             CCCccEEEEcCCCH--HHHHHHHHHcccC---CEEE
Q 020768          252 GTGIDVSFDCAGFN--KTMSTALSATRAG---GKVC  282 (321)
Q Consensus       252 ~~~~d~vid~~g~~--~~~~~~~~~l~~~---G~~v  282 (321)
                       .++|+||.+++..  .....+++.+...   .+++
T Consensus        76 -~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (321)
T 3c1o_A           76 -KQVDIVISALPFPMISSQIHIINAIKAAGNIKRFL  110 (321)
T ss_dssp             -TTCSEEEECCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred             -cCCCEEEECCCccchhhHHHHHHHHHHhCCccEEe
Confidence             3699999998842  1233455554443   3666

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	321
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	7e-38
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	9e-31
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	1e-26
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	3e-26
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	1e-25
d1pl8a2	171	c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh	3e-23
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	6e-23
d1vj0a1	184	b.35.1.2 (A:2-155,A:338-367) Hypothetical protein	2e-22
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	6e-22
d1rjwa1	171	b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase	7e-22
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	1e-21
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	1e-21
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	3e-21
d1e3ja2	170	c.2.1.1 (A:143-312) Ketose reductase (sorbitol deh	9e-21
d1uufa1	179	b.35.1.2 (A:3-144,A:313-349) Hypothetical protein	1e-20
d1jqba1	177	b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon	2e-20
d1h2ba1	171	b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas	4e-20
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	1e-18
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	1e-17
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	7e-15
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	4e-14
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	6e-11
d1tt7a1	162	b.35.1.2 (A:2-127,A:295-330) Hypothetical protein	5e-10
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	1e-09
d1xa0a1	152	b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homo	2e-09
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	4e-09
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	1e-08
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	6e-08
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	1e-07
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	2e-07
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	7e-07
d1o89a1	146	b.35.1.2 (A:1-115,A:293-323) Hypothetical protein	9e-07
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	6e-06
d1qora1	147	b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductas	5e-05
d1gu7a1	175	b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu	6e-05
d1uufa2	168	c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc	3e-04
d1yb5a1	150	b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductas	6e-04
d1piwa2	168	c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase	0.001
d1iz0a1	131	b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase	0.002

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  131 bits (329), Expect = 7e-38
 Identities = 78/177 (44%), Positives = 104/177 (58%), Gaps = 2/177 (1%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL+RM +VGICGSDVHY +  R  +F+VK+PMV+
Sbjct: 8   NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVL 67

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G +EKVGS VK L PGDRVA+EPG      + CK GRYNL P + F ATPP  G+
Sbjct: 68  GHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGN 127

Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIG 194
           L     H A  C+KLPDNV         PL   L A      G    +++    P  
Sbjct: 128 LCRFYKHNAAFCYKLPDNVKPLV-THRFPLEKALEAFETFKKGLGLKIML-KCDPSD 182

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score =  112 bits (280), Expect = 9e-31
 Identities = 80/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++A L   N L+++   +P     +VL++M  VGICGSDVHY +  R ADF+VK+PMVI
Sbjct: 2   NLSAVLYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVI 61

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G + KVG  VK L  GDRVA+EPG+ C RC  CK G+YNLCP++ F ATPP  G+
Sbjct: 62  GHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGN 121

Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHACRRANIGPETNVLIMGA 190
           LA   VH AD C KLPDN ++++       L   + A   A    +  + +M +
Sbjct: 122 LARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMIS 175

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score =  101 bits (253), Expect = 1e-26
 Identities = 46/208 (22%), Positives = 82/208 (39%), Gaps = 27/208 (12%)

Query: 18  NMAAWLLGVNTLKIQPFELPSL-------GPYDVLVRMKAVGICGSDVHYLKTLRCADFV 70
           N     LG   +++Q  + P +         + V++++ +  ICGSD H ++        
Sbjct: 2   NRGVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVR----GRTT 57

Query: 71  VKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK--- 127
            +  +V+GHE  G + + G +V+ L  GD V++   ++C RC  CK     +C  +    
Sbjct: 58  AQVGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPAR 117

Query: 128 ------FFATPPVHGSLANQVVHPAD--LCFKLPDNVS-LEEGAMCEPLSVGLHACRRAN 178
                 +       G  A  V+ P       KLPD    +E+  + E + V + +   A 
Sbjct: 118 AGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVGVQVISLDDAP 177

Query: 179 IGPETNVLIMGAGPIGLVTMLGARAFGA 206
            G         AG      +   + F A
Sbjct: 178 RGYG----EFDAGVPKKFVIDPHKTFSA 201

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score =  101 bits (251), Expect = 3e-26
 Identities = 37/179 (20%), Positives = 65/179 (36%), Gaps = 16/179 (8%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L ++   +     ++V +++ A GICGSD              K P+++GHE  GV+E +
Sbjct: 21  LSLETITVAPPKAHEVRIKILASGICGSDSSV----LKEIIPSKFPVILGHEAVGVVESI 76

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL 148
           G+ V  + PGD+V       C  C  CK    N C +    A   +   + ++       
Sbjct: 77  GAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKP 136

Query: 149 CFKLPDNVSLEEGAMCEPLSVG------------LHACRRANIGPETNVLIMGAGPIGL 195
            + L    +  E  +   ++V                     I     +L  G G   +
Sbjct: 137 IYNLMGTSTFTEYTVVADIAVAKIDPKINVNFLVSTKLTLDQINKAFELLSSGQGVRSI 195

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 99.1 bits (246), Expect = 1e-25
 Identities = 37/174 (21%), Positives = 69/174 (39%), Gaps = 12/174 (6%)

Query: 27  NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE 86
              K   ++      +D+ ++++A G+CGSD+H           +K P+V+GHE  G + 
Sbjct: 19  KNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHC---AAGHWGNMKMPLVVGHEIVGKVV 75

Query: 87  KVGSEVKTLV-PGDRVAL-EPGISCWRCDHCKGGRYNLCPEMKFFATPP------VHGSL 138
           K+G +  + +  G RV +     SC  CD CK      C +     + P        G  
Sbjct: 76  KLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGY 135

Query: 139 ANQVVHPADLCFKLPDNVSLEEGAMCEP-LSVGLHACRRANIGPETNVLIMGAG 191
           AN V         +P+N+ +E   + E  +        + ++     ++     
Sbjct: 136 ANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAFERMEKGDVRYRFTLVGYDKE 189

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.9 bits (227), Expect = 3e-23
 Identities = 64/148 (43%), Positives = 93/148 (62%), Gaps = 2/148 (1%)

Query: 156 VSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD 215
           V+ EEGA+ EPLSVG+HACRR  +     VL+ GAGPIG+VT+L A+A GA ++V+ D+ 
Sbjct: 1   VTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLS 60

Query: 216 DYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSAT 275
             RLS AKE+GAD ++++S           + Q  +G   +V+ +C G   ++   + AT
Sbjct: 61  ATRLSKAKEIGADLVLQISKESPQEIARKVEGQ--LGCKPEVTIECTGAEASIQAGIYAT 118

Query: 276 RAGGKVCLVGMGHLEMTVPLTPAAARYL 303
           R+GG + LVG+G    TVPL  AA R +
Sbjct: 119 RSGGTLVLVGLGSEMTTVPLLHAAIREV 146

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 92.3 bits (228), Expect = 6e-23
 Identities = 37/182 (20%), Positives = 65/182 (35%), Gaps = 25/182 (13%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+  E+      ++ +++ A G+C +D+++L   +  D          HE AG++E V
Sbjct: 21  LVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLG---HEGAGIVESV 77

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH------------- 135
           G  V    PG++V       C  C  C+  + N C +     +P V              
Sbjct: 78  GPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRK 137

Query: 136 -------GSLANQVVHPADLCFKLPDNVSLEEGA-MCEPLSVGLHAC-RRANIGPETNVL 186
                   + +   V       K+  +V L+E      PL     A     +      VL
Sbjct: 138 VLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVL 197

Query: 187 IM 188
            +
Sbjct: 198 SL 199

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 90.3 bits (223), Expect = 2e-22
 Identities = 43/173 (24%), Positives = 69/173 (39%), Gaps = 22/173 (12%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L  + FE+  +    +LV + + G+CGSDVH     R  D  V  P+++GHE AG + +V
Sbjct: 17  LVYKEFEISDIPRGSILVEILSAGVCGSDVHM---FRGEDPRVPLPIILGHEGAGRVVEV 73

Query: 89  GSEVKTLVPGD-----RVALEPGISCWRCDHCK-GGRYNLCPEMKFF-------ATPPVH 135
             E + L          +    GI+C  C  CK      LCP  K +         P + 
Sbjct: 74  NGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLR 133

Query: 136 GSLANQ-VVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLI 187
           G  ++  V+ P     K+ + ++        PL     A           V++
Sbjct: 134 GCYSSHIVLDPETDVLKVSEKITHR-----LPLKEANKALELMESREALKVIL 181

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 88.8 bits (219), Expect = 6e-22
 Identities = 46/162 (28%), Positives = 70/162 (43%), Gaps = 6/162 (3%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L+I+  ++P  GP  VLV+++A G+C +D+H  +           P + GHE  G +  V
Sbjct: 18  LRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAE--GDWPVKPPLPFIPGHEGVGYVAAV 75

Query: 89  GSEVKTLVPGDRVALEPGISCW-RCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD 147
           GS V  +  GDRV +    +    C+HC  G   LC   +      V+G  A  V+   +
Sbjct: 76  GSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNT-GYSVNGGYAEYVLADPN 134

Query: 148 LCFKLPDNVSLEEGA-MCEPLSVGLHACRRANIGPETNVLIM 188
               LP NV         + ++  L   R   I     VL M
Sbjct: 135 YVGILPKNVKATIHPGKLDDINQILDQMRAGQIEGRI-VLEM 175

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 88.5 bits (218), Expect = 7e-22
 Identities = 52/162 (32%), Positives = 74/162 (45%), Gaps = 6/162 (3%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           LKI+  E P++   +VLVR+KA G+C +D+H            K P++ GHE  G++E+V
Sbjct: 13  LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAH--GDWPVKPKLPLIPGHEGVGIVEEV 70

Query: 89  GSEVKTLVPGDRVALEPGISCWR-CDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD 147
           G  V  L  GDRV +    S    CD+C  G+  LC   K      V G  A      AD
Sbjct: 71  GPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNA-GYSVDGGYAEYCRAAAD 129

Query: 148 LCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMG 189
              K+PDN  +E     E ++       +  I     VL + 
Sbjct: 130 YVVKIPDNTIIEV-QPLEKINEVFDRMLKGQINGRV-VLTLE 169

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 88.8 bits (219), Expect = 1e-21
 Identities = 37/173 (21%), Positives = 63/173 (36%), Gaps = 31/173 (17%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+  E+      +V +++ A  +C +D++              P+V+GHECAG++E V
Sbjct: 21  LCIEEIEVSPPKACEVRIQVIATCVCPTDINA----TDPKKKALFPVVLGHECAGIVESV 76

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV-------------- 134
           G  V    PGD+V       C RC  C     NLC +++ F  P +              
Sbjct: 77  GPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTC 136

Query: 135 ----------HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA 177
                       S +   V       ++ D   L+        ++   +   A
Sbjct: 137 KGRSIYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLV---THALPFESINDA 186

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 88.4 bits (218), Expect = 1e-21
 Identities = 34/169 (20%), Positives = 63/169 (37%), Gaps = 26/169 (15%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+  E+     ++V +++ A  +C +D +   TL  AD     P+++GH  AG++E V
Sbjct: 19  LSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPEGCFPVILGHLGAGIVESV 75

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH------------- 135
           G  V  L  GD V       C  C  C   + NLC +++      +              
Sbjct: 76  GEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKT 135

Query: 136 -------GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA 177
                   + +   V       K+   + ++E       ++      +A
Sbjct: 136 ILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFV---THNLSFDEINKA 181

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 86.9 bits (214), Expect = 3e-21
 Identities = 48/166 (28%), Positives = 71/166 (42%), Gaps = 9/166 (5%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVH-----YLKTLRCADFVVKEPMVIGHECAG 83
           L +Q   +P      VL++++A G+C SDVH     +       D  VK P+ +GHE AG
Sbjct: 13  LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72

Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
            IE+VG EV     GD VA+ P      C +C+ G  +LC   ++       G+ A  V+
Sbjct: 73  KIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVI 131

Query: 144 HPA-DLCFKLPDNVSLEEGAM-CEPLSVGLHACRRANIGPETNVLI 187
            P     +KL     +    M  E  +  +             VLI
Sbjct: 132 VPHYKYMYKLRRVKPMITKTMKLEEANEAIDNLENFKAIGRQ-VLI 176

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 85.4 bits (210), Expect = 9e-21
 Identities = 69/148 (46%), Positives = 97/148 (65%), Gaps = 1/148 (0%)

Query: 156 VSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD 215
           VSLEEGA+ EPLSVG+HACRRA +   T VL++GAGPIGLV++L A+A+GA  +      
Sbjct: 1   VSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTAR-S 59

Query: 216 DYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSAT 275
             RL VAK  GAD  + V    ++ +  +E+I+ A+G   +V+ DC+G  K ++  ++ T
Sbjct: 60  PRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINIT 119

Query: 276 RAGGKVCLVGMGHLEMTVPLTPAAARYL 303
           R GG + LVGMG   +TVPL  A AR +
Sbjct: 120 RTGGTLMLVGMGSQMVTVPLVNACAREI 147

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 85.0 bits (209), Expect = 1e-20
 Identities = 36/160 (22%), Positives = 59/160 (36%), Gaps = 13/160 (8%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L+         GP DV + +   G+C SD+H    +R        P V GHE  G +  V
Sbjct: 13  LEPMDITRREPGPNDVKIEIAYCGVCHSDLHQ---VRSEWAGTVYPCVPGHEIVGRVVAV 69

Query: 89  GSEVKTLVPGDRVALEPGISCWR-CDHCKGGRYNLCPEMKFFATPP-------VHGSLAN 140
           G +V+   PGD V +   +   + C+ C+ G  N C  M      P         G  + 
Sbjct: 70  GDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQ 129

Query: 141 QVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIG 180
           Q+V       ++       E    + ++       R ++ 
Sbjct: 130 QIVVHERYVLRIRVA--DIEMIRADQINEAYERMLRGDVK 167

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 85.0 bits (209), Expect = 2e-20
 Identities = 48/182 (26%), Positives = 68/182 (37%), Gaps = 16/182 (8%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
              +LG+N L     E P  G YD +VR  AV  C SD+H    +       ++ M++GH
Sbjct: 3   GFAMLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHT---VFEGALGDRKNMILGH 59

Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGS 137
           E  G + +VGSEVK   PGDRV +      WR    + G       M      +    G 
Sbjct: 60  EAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGV 119

Query: 138 LANQVVHPA--DLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGL 195
                           LP +V L +      +  G      A       +L+M   P  L
Sbjct: 120 FGEYFHVNDADMNLAILPKDVDLSKLVTH--VYHGFDHIEEA-------LLLMKDKPKDL 170

Query: 196 VT 197
           + 
Sbjct: 171 IK 172

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 84.0 bits (206), Expect = 4e-20
 Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 4/161 (2%)

Query: 29  LKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK 87
           L+I+  + P L G +DV+VR+   G+C +D+H ++ +       K P  +GHE  G IE+
Sbjct: 12  LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEE 71

Query: 88  VGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD 147
           V   V+ L  GD V L P ++   C  C+ G    C  ++F       G  A  +     
Sbjct: 72  VAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGF-AEFMRTSHR 130

Query: 148 LCFKLPDNVSLEEGA-MCEPLSVGLHACRRANIGPETNVLI 187
              KLP +V +E      + ++  L    +  +     VLI
Sbjct: 131 SVIKLPKDVRVEVDIHKLDEINDVLERLEKGEVLGRA-VLI 170

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 80.4 bits (197), Expect = 1e-18
 Identities = 37/197 (18%), Positives = 69/197 (35%), Gaps = 11/197 (5%)

Query: 19  MAAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           +AA         ++Q  ++      +VLV++ A G+C +D+      R   + V  P V+
Sbjct: 5   IAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIV----RDQKYPVPLPAVL 60

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G+IE +G  V  L  GD V L     C +C  C  G    C E          G+
Sbjct: 61  GHEGSGIIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEF---FGRNFSGA 116

Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRR--ANIGPETNVLIMGAGPIGL 195
            +            + ++    + +         +   +   +   +  V       I  
Sbjct: 117 DSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQLVKFYAFDEINQ 176

Query: 196 VTMLGARAFGAPRIVIV 212
             +   +      I+ +
Sbjct: 177 AAIDSRKGITLKPIIKI 193

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 78.0 bits (191), Expect = 1e-17
 Identities = 40/182 (21%), Positives = 64/182 (35%), Gaps = 32/182 (17%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H          V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHV----VSGTLVTPLPVIAGHEAAGIVESI 76

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH------------- 135
           G  V T+ PGD+V       C +C  CK    N C +                       
Sbjct: 77  GEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKP 136

Query: 136 -------GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIM 188
                   + +   V       K+    +L      +PL   +    +  I    ++L  
Sbjct: 137 IHHFLGTSTFSQYTVVDEISVAKIDAAFAL------DPLITHVLPFEK--INEGFDLLRS 188

Query: 189 GA 190
           G 
Sbjct: 189 GE 190

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 69.9 bits (170), Expect = 7e-15
 Identities = 36/153 (23%), Positives = 64/153 (41%), Gaps = 19/153 (12%)

Query: 162 AMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV 221
            + + L  G H    A +GP + V + GAGP+GL     AR  GA  +++ D++  RL+ 
Sbjct: 6   CLSDILPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAH 65

Query: 222 AKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGF---------------NK 266
           AK  G +      +    + E++  +       +D + D  GF                 
Sbjct: 66  AKAQGFEIA--DLSLDTPLHEQIAALL--GEPEVDCAVDAVGFEARGHGHEGAKHEAPAT 121

Query: 267 TMSTALSATRAGGKVCLVGMGHLEMTVPLTPAA 299
            +++ +  TR  GK+ + G+   E    +  AA
Sbjct: 122 VLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAA 154

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 67.3 bits (163), Expect = 4e-14
 Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 5/145 (3%)

Query: 156 VSLEEGAM-CEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV 214
           + LE   M  + ++ G H    A+I   ++V+++G G +GL+ + GA+  GA RI+ V  
Sbjct: 1   MPLENAVMITDMMTTGFHGAELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGS 60

Query: 215 DDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSA 274
               +  AK  GA +I     N ++   E + ++   G G+D      G ++T+S A+  
Sbjct: 61  RPICVEAAKFYGATDI----LNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKM 116

Query: 275 TRAGGKVCLVGMGHLEMTVPLTPAA 299
            + GG +  +        + +    
Sbjct: 117 VKPGGIISNINYHGSGDALLIPRVE 141

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 58.0 bits (139), Expect = 6e-11
 Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 10/138 (7%)

Query: 165 EPLSVGLH-----ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRL 219
            PL  G+            + P ++ +  GAG +GL  +L A+  GA  I+ VD+ + RL
Sbjct: 7   GPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRL 66

Query: 220 SVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGG 279
            +AK+LGA +++   T      + V  I++    G++ + +  G  + +   + A    G
Sbjct: 67  ELAKQLGATHVINSKTQ-----DPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILG 121

Query: 280 KVCLVGMGHLEMTVPLTP 297
           K+ +VG   L  T     
Sbjct: 122 KIAVVGAPQLGTTAQFDV 139

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 162

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 55.3 bits (132), Expect = 5e-10
 Identities = 23/172 (13%), Positives = 44/172 (25%), Gaps = 27/172 (15%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
              ++ ++      L    VL+++   GI   D    K            + I       
Sbjct: 14  DDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAG--- 70

Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
                                  +    +  +    +      +       G L+     
Sbjct: 71  -----------------------TVVSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASV 107

Query: 145 PADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLV 196
           P D    LP N+SL+E  + + L++           P     I+     G V
Sbjct: 108 PGDWLVPLPQNLSLKEAMVDQLLTIVDREVSL-EETPGALKDILQNRIQGRV 158

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 54.5 bits (130), Expect = 1e-09
 Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 6/127 (4%)

Query: 173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVK 232
           A   A + P +   + G G +G   ++G +A GA RI+ V     +   A ELGA   + 
Sbjct: 19  AVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECL- 77

Query: 233 VSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATRA-GGKVCLVGMGHLE 290
              N +D  + + ++       G+D + +CAG  +TM  AL +T    G   ++G+    
Sbjct: 78  ---NPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPN 134

Query: 291 MTVPLTP 297
             +PL P
Sbjct: 135 ERLPLDP 141

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 152

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 53.0 bits (126), Expect = 2e-09
 Identities = 24/177 (13%), Positives = 39/177 (22%), Gaps = 32/177 (18%)

Query: 18  NMAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE 73
              A+++       T  +Q   +  L   DVLVR+    +   D                
Sbjct: 3   AFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPF 62

Query: 74  PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPP 133
              I          V S+      GD V                                
Sbjct: 63  VPGIDLAG----VVVSSQHPRFREGDEVIATGYEIGV----------------------T 96

Query: 134 VHGSLANQVVHPADLCFKLPDNVSLEEGAM-CEPLSVGLHACRRANIGPETNVLIMG 189
             G  +       +    LP  +      +    L   L    R  +   T V+ + 
Sbjct: 97  HFGGYSEYARLHGEWLVPLPKGLERIAQEISLAELPQALKRILRGELRGRT-VVRLA 152

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 52.9 bits (126), Expect = 4e-09
 Identities = 28/134 (20%), Positives = 60/134 (44%), Gaps = 7/134 (5%)

Query: 167 LSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL 225
            S G  A  +   + P +  ++ G G +GL  ++G ++ GA RI+ +D++  +   A  +
Sbjct: 14  FSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAV 73

Query: 226 GADNIVKVSTNLQDIAEEVEKIQKAMG-TGIDVSFDCAGFNKTMSTALSATRAGGKVC-L 283
           GA   +    + +D  + + ++   M    +  +F+  G  +TM  AL++         +
Sbjct: 74  GATECI----SPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVV 129

Query: 284 VGMGHLEMTVPLTP 297
           VG+      +   P
Sbjct: 130 VGVPPSAKMLTYDP 143

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 51.9 bits (123), Expect = 1e-08
 Identities = 33/145 (22%), Positives = 60/145 (41%), Gaps = 1/145 (0%)

Query: 154 DNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVD 213
           D++ +   AMC   +                V+I GAGP+GL  ++ AR+ GA  ++++ 
Sbjct: 1   DDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIA 60

Query: 214 VDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALS 273
               RL +A+E+GAD  +       +   +   +    G G D   +  G ++ +     
Sbjct: 61  GSPNRLKLAEEIGADLTLNRRETSVEERRK-AIMDITHGRGADFILEATGDSRALLEGSE 119

Query: 274 ATRAGGKVCLVGMGHLEMTVPLTPA 298
             R GG   + G+   +  VP    
Sbjct: 120 LLRRGGFYSVAGVAVPQDPVPFKVY 144

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 49.6 bits (117), Expect = 6e-08
 Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 4/124 (3%)

Query: 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS 234
             A + P +   + G G +GL  ++G +  GA RI+ VD++  + + AKE GA   +   
Sbjct: 22  NTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQ 81

Query: 235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHLEMTV 293
              + I    E + +    G+D SF+C G  K M  AL A   G G   +VG+      +
Sbjct: 82  DFSKPI---QEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEI 138

Query: 294 PLTP 297
              P
Sbjct: 139 ATRP 142

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 48.4 bits (114), Expect = 1e-07
 Identities = 31/145 (21%), Positives = 61/145 (42%), Gaps = 11/145 (7%)

Query: 156 VSLEEGAMCEPLSV----GLHACRRA--NIGPETNVLIMGAGPIGLVTMLGARAFGAPRI 209
           +S E+     PL+        A ++A   + P   V I+G G +G + +   +      +
Sbjct: 1   ISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATV 60

Query: 210 VIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMS 269
           + +DV + +L +A+ LGAD++V    +          ++   G G++V+ D  G   T+ 
Sbjct: 61  IALDVKEEKLKLAERLGADHVVDARRDPVKQ-----VMELTRGRGVNVAMDFVGSQATVD 115

Query: 270 TALSATRAGGKVCLVGMGHLEMTVP 294
                    G++ +VG G       
Sbjct: 116 YTPYLLGRMGRLIIVGYGGELRFPT 140

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 48.0 bits (113), Expect = 2e-07
 Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 4/126 (3%)

Query: 173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVK 232
           A   A + P +   + G G +GL  ++G +  GA RI+ +D++  +   AK LGA + + 
Sbjct: 20  AINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLN 79

Query: 233 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCL-VGMGHLEM 291
                + + + + ++      G+D S DCAG  +T+  A+  T  G   C  VG    EM
Sbjct: 80  PRELDKPVQDVITELTAG---GVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEM 136

Query: 292 TVPLTP 297
           T+P   
Sbjct: 137 TIPTVD 142

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 46.5 bits (109), Expect = 7e-07
 Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 5/121 (4%)

Query: 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS 234
           + A +   +   + G G +GL  ++G +A GA RI+ VD++  + + AKE+GA   V   
Sbjct: 22  KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV--- 78

Query: 235 TNLQDIAEEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTV 293
            N QD  + ++++   M   G+D SF+  G   TM TALS  +    V ++     +   
Sbjct: 79  -NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQN 137

Query: 294 P 294
            
Sbjct: 138 L 138

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 146

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 45.6 bits (107), Expect = 9e-07
 Identities = 23/149 (15%), Positives = 39/149 (26%), Gaps = 30/149 (20%)

Query: 19  MAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEP 74
           + A LL    G     +Q  +   L   DV V +    +   D   +        +   P
Sbjct: 1   LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAIT--GKGKIIRNFP 58

Query: 75  MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 134
           M+ G + AG +              R      +                           
Sbjct: 59  MIPGIDFAGTVRT--------SEDPRFHAGQEVLLTGWGVG----------------ENH 94

Query: 135 HGSLANQVVHPADLCFKLPDNVSLEEGAM 163
            G LA Q     D    +P   + +E ++
Sbjct: 95  WGGLAEQARVKGDWLVAMPQGQAAKEISL 123

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 43.9 bits (102), Expect = 6e-06
 Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 3/123 (2%)

Query: 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS 234
             A + P +   + G G +GL  ++G  + GA RI+ VD++  +   AK  GA + V  +
Sbjct: 22  NTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPN 81

Query: 235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVP 294
            + + I    + + K    G+D S +C G    M  AL +   G  V ++        V 
Sbjct: 82  DHSEPI---SQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVA 138

Query: 295 LTP 297
             P
Sbjct: 139 TRP 141

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 40.4 bits (93), Expect = 5e-05
 Identities = 26/166 (15%), Positives = 42/166 (25%), Gaps = 33/166 (19%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
           G   L+   F        ++ V  KA+GI                    P  +G E AG+
Sbjct: 11  GPEVLQAVEFTPADPAENEIQVENKAIGIN---FIDTYIRSGLYPPPSLPSGLGTEAAGI 67

Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           + KV                            G R                   ++    
Sbjct: 68  VSKV-------------------GSGVKHIKAGDRVVYAQSALGA--------YSSVHNI 100

Query: 145 PADLCFKLPDNVSLEEG-AMCEPLSVGL--HACRRANIGPETNVLI 187
            AD    LP  + ++       PL      H    +     +++LI
Sbjct: 101 IADKAAILPAAIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLI 146

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 40.9 bits (94), Expect = 6e-05
 Identities = 18/175 (10%), Positives = 40/175 (22%), Gaps = 21/175 (12%)

Query: 26  VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVI 85
           V   +    +  +L P +V+V+     +  SD++ ++ +  +              A   
Sbjct: 18  VLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPC- 76

Query: 86  EKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHP 145
                                   +          +L        +    G+     +  
Sbjct: 77  -------------------GNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGN 117

Query: 146 ADLCFKLPDNVSLEEGAMCEPLSVGLHACR-RANIGPETNVLIMGAGPIGLVTML 199
            D   KLP+    +       L+             P   +   G         L
Sbjct: 118 DDDFIKLPNPAQSKANGKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQL 172

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 38.8 bits (89), Expect = 3e-04
 Identities = 28/132 (21%), Positives = 43/132 (32%), Gaps = 14/132 (10%)

Query: 159 EEGAMCEPLSVG----LHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV 214
           E+ A   PL           R    GP   V ++G G +G + +  A A GA  +     
Sbjct: 4   EQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTS 63

Query: 215 DDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSA 274
           +  R   AK LGAD +         +         A     D   +       +    + 
Sbjct: 64  EAKR-EAAKALGADEV---------VNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTTL 113

Query: 275 TRAGGKVCLVGM 286
            +  G + LVG 
Sbjct: 114 LKRDGTMTLVGA 125

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 150

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (85), Expect = 6e-04
 Identities = 22/104 (21%), Positives = 40/104 (38%), Gaps = 3/104 (2%)

Query: 25  GVNTLKIQP-FELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAG 83
           G   LK++    +P    + VL+++ A G+   + +          ++      G + AG
Sbjct: 13  GPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTP--GSDVAG 70

Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK 127
           VIE VG        GDRV     IS    ++     + +    +
Sbjct: 71  VIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPE 114

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.9 bits (84), Expect = 0.001
 Identities = 31/148 (20%), Positives = 54/148 (36%), Gaps = 10/148 (6%)

Query: 156 VSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVD 213
           +     A  +C  L+V      R   GP   V I+G G IG +  L ++A GA   VI  
Sbjct: 1   IPSHLAAPLLCGGLTV-YSPLVRNGCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISR 59

Query: 214 VDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALS 273
               R   A ++GAD+         +  +  EK        +  +      +   +    
Sbjct: 60  SSRKR-EDAMKMGADHY----IATLEEGDWGEKYFDTFDLIVVCASSLTDID--FNIMPK 112

Query: 274 ATRAGGKVCLVGMGHLEMTVPLTPAAAR 301
           A + GG++  + +      + L P   +
Sbjct: 113 AMKVGGRIVSISIPEQHEMLSLKPYGLK 140

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 35.6 bits (81), Expect = 0.002
 Identities = 24/162 (14%), Positives = 41/162 (25%), Gaps = 45/162 (27%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L++     P     +V++R++AVG+  +D                P + G E  GV    
Sbjct: 13  LELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRL--HPPFIPGMEVVGV---- 66

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL 148
                                                          G LA +V  P   
Sbjct: 67  ---------------------VEGRRYAALVP--------------QGGLAERVAVPKGA 91

Query: 149 CFKLPDNVSLEEGA-MCEPLSVGLHAC-RRANIGPETNVLIM 188
              LP+   +               A   R + G +  V+ +
Sbjct: 92  LLPLPEGRPVVGPVFPFAEAEAAFRALLDRGHTG-KV-VVRL 131

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	321
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	100.0
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	100.0
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	100.0
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	100.0
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	100.0
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	100.0
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	100.0
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	100.0
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	100.0
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	100.0
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	100.0
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	100.0
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	100.0
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.97
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	99.97
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.97
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.97
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.96
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.95
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.95
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.95
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.94
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.93
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.93
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.93
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.92
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.92
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.92
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.92
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.92
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.91
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.91
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.91
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.91
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.91
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.91
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.91
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.91
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.9
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.9
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.89
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.89
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.89
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.89
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.88
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.88
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.87
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.87
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.87
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.84
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.83
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.83
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.59
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.59
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.35
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	98.0
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	97.95
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	97.91
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.83
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	97.82
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.63
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	97.63
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	97.62
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	97.6
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	97.59
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	97.58
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	97.53
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	97.53
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	97.52
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	97.48
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	97.48
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.48
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	97.47
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	97.43
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.43
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	97.4
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	97.36
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	97.36
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	97.34
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	97.31
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.29
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	97.27
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	97.27
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	97.27
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.25
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	97.24
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	97.24
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	97.22
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	97.22
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.21
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	97.2
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	97.19
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	97.18
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	97.14
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	97.11
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	97.09
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	97.09
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	97.08
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	97.06
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	97.03
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	97.03
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	97.03
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	97.03
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	97.01
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	96.99
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	96.99
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	96.98
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	96.98
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	96.97
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	96.97
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	96.97
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.95
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	96.89
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	96.89
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	96.86
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	96.85
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	96.83
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.82
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	96.81
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.8
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.8
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	96.77
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	96.75
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	96.75
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	96.75
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	96.75
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	96.71
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	96.6
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	96.59
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	96.59
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	96.56
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	96.56
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.55
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	96.54
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.53
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.51
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	96.49
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	96.48
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	96.39
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	96.38
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.32
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	96.29
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	96.21
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	96.21
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.2
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	96.18
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	96.17
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	96.05
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	96.02
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	96.01
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	95.98
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.95
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	95.95
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	95.92
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	95.89
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	95.87
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	95.84
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	95.76
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	95.74
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	95.61
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	95.57
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	95.5
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	95.43
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	95.38
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	95.32
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	95.27
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	95.23
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	95.23
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	95.08
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	95.05
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	95.03
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	94.83
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	94.81
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.7
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	94.55
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	94.51
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	94.51
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	94.46
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	94.45
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	94.39
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	94.36
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	94.36
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	94.35
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	94.33
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	94.26
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	94.25
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	94.24
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	94.18
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	94.17
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.1
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	94.1
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	94.09
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	94.04
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	94.02
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	94.01
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	93.97
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	93.95
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	93.9
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	93.76
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	93.74
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	93.65
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	93.61
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	93.59
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	93.58
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	93.58
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	93.54
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	93.53
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	93.5
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	93.46
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	93.42
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	93.42
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	93.41
d1fcja_	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	93.37
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	93.33
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	93.23
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	93.22
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	93.07
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	92.82
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	92.81
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	92.81
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	92.78
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	92.66
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	92.62
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	92.59
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.57
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	92.52
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	92.5
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	92.49
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	92.4
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	92.32
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	92.3
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	92.27
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	92.25
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	92.24
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	92.17
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	92.1
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	92.09
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	91.83
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	91.73
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	91.73
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	91.7
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	91.68
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	91.61
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	91.44
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	91.42
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	91.26
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	91.21
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	91.18
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	90.99
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	90.94
d1ixka_	313	Hypothetical methyltransferase PH1374 {Archaeon Py	90.78
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	90.69
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	90.6
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	90.54
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	90.53
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	90.51
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	90.43
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	90.38
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	90.37
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	90.27
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	90.22
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	90.19
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	90.19
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	90.18
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	90.09
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	90.03
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	90.0
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	89.9
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	89.89
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	89.78
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	89.66
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	89.64
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	89.56
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	89.5
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	89.5
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	89.24
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	89.22
d1wkva1	382	O-acetylserine sulfhydrylase (Cysteine synthase) {	88.74
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.72
d1o58a_	293	O-acetylserine sulfhydrylase (Cysteine synthase) {	88.65
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	88.63
d1yzha1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Strep	88.5
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	88.45
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	88.42
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	88.39
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	88.37
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	88.26
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	88.14
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	88.02
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	87.98
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	87.93
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	87.86
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	87.77
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	87.74
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	87.7
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	87.7
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	87.64
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	87.63
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	87.53
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	87.48
d1sqga2	284	Ribosomal RNA small subunit methyltransferase B, R	87.47
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	87.42
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	87.36
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	87.17
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	87.14
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	87.08
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	87.01
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	87.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	86.98
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	86.95
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	86.91
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	86.52
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	86.5
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	86.22
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	86.04
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	85.92
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	85.81
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	85.61
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	85.53
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	85.49
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	85.39
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	85.35
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	85.35
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	85.32
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	85.28
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	85.09
d1vlma_	208	Possible histamine N-methyltransferase TM1293 {The	84.79
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	84.75
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	84.6
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	84.55
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	84.37
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	84.1
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	83.85
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	83.77
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	83.62
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	83.53
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	83.37
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	83.14
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	83.03
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	83.0
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	82.71
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	82.67
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	82.66
d1p5ja_	319	L-serine dehydratase {Human (Homo sapiens) [TaxId:	82.64
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	82.57
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	82.52
d1qopb_	390	Tryptophan synthase, beta-subunit {Salmonella typh	82.35
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	82.29
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	82.28
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	82.23
d2dula1	375	N(2),N(2)-dimethylguanosine tRNA methyltransferase	82.23
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	82.13
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	82.07
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	81.83
d1jqea_	280	Histamine methyltransferase {Human (Homo sapiens)	81.78
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	81.74
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	81.65
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	81.48
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	81.41
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	81.18
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	81.17
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	80.98
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	80.96
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	80.95
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	80.9
d1jsxa_	207	Glucose-inhibited division protein B (GidB) {Esche	80.88
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	80.83
d1xdza_	239	Glucose-inhibited division protein B (GidB) {Bacil	80.63
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	80.22
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	80.2
d2g72a1	263	Phenylethanolamine N-methyltransferase, PNMTase {H	80.2
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	80.04

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=100.00  E-value=7e-39  Score=264.76  Aligned_cols=173  Identities=46%  Similarity=0.812  Sum_probs=161.1

Q ss_pred             ceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCC
Q 020768           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (321)
Q Consensus        18 ~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~   97 (321)
                      |+|+++++++.|+++|+|.|+|+++||||||++++||++|++.+++........++|+++|||++|+|+++|+++++|++
T Consensus         2 ~maAVl~g~~~l~~~e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v~~~~~   81 (178)
T d1e3ja1           2 NLSAVLYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKK   81 (178)
T ss_dssp             CEEEEEEETTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSCCT
T ss_pred             ceEEEEEcCCcEEEEEeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCcccCCCCC
Confidence            57777888999999999999999999999999999999999999887655555678999999999999999999999999


Q ss_pred             CCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHHHHHH
Q 020768           98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHACRR  176 (321)
Q Consensus        98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~~l~~  176 (321)
                      ||+|++.+...|+.|+.|..+..++|.+..+.++...+|+|+||+++++++++++|+++++++||++ .++.|+|++++.
T Consensus        82 GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~a~~~  161 (178)
T d1e3ja1          82 GDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDAFEA  161 (178)
T ss_dssp             TCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCCCGGGEEEEEEGGGHHHHHHH
T ss_pred             CCEEEECcccccCCccccccCCccccccccceeccccccccceeeeecccceeeCCCCCCHHHHHHHHhHHHHHHHHHHH
Confidence            9999999999999999999999999999998888888999999999999999999999999998876 488899999999


Q ss_pred             cCCCCCCEEEEEcC
Q 020768          177 ANIGPETNVLIMGA  190 (321)
Q Consensus       177 ~~~~~g~~vlI~Ga  190 (321)
                      +++++|++|+|+|+
T Consensus       162 ~~~~~g~~VlVig~  175 (178)
T d1e3ja1         162 ARKKADNTIKVMIS  175 (178)
T ss_dssp             HHHCCTTCSEEEEE
T ss_pred             hCCCCCCEEEEEcc
Confidence            99999999999975

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-37  Score=256.16  Aligned_cols=174  Identities=44%  Similarity=0.761  Sum_probs=159.2

Q ss_pred             hhceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCC
Q 020768           16 EVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (321)
Q Consensus        16 ~~~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~   95 (321)
                      +.|+|+++++++.|+++|+|.|+|+++||||||.+++||++|++.+++...+....++|+++|||++|+|+++|+++++|
T Consensus         6 p~~~a~V~~gp~~l~l~evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~   85 (185)
T d1pl8a1           6 PNNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHL   85 (185)
T ss_dssp             CCCEEEEEEETTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCSC
T ss_pred             CCCEEEEEeCCCeEEEEEeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEeccceeee
Confidence            46889999999999999999999999999999999999999999998765554456789999999999999999999999


Q ss_pred             CCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHHHH
Q 020768           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACR  175 (321)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~  175 (321)
                      ++||+|++.+..+|++|.+|+.+++++|.+..+.+....+|+|+||++++.++++++|+++++++|++. ++++++++++
T Consensus        86 ~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~g~~~~~G~~aey~~~~~~~~~~lP~~~~~~~aa~~-pl~~a~~a~~  164 (185)
T d1pl8a1          86 KPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRF-PLEKALEAFE  164 (185)
T ss_dssp             CTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCGGGEEEEE-EGGGHHHHHH
T ss_pred             cccccceecceeccccchhhccchhchhccceeeecccccccceEEEEEchHHEEECCCCCCHHHHHHH-HHHHHHHHHH
Confidence            999999999999999999999999999999998888788999999999999999999999999887654 6777888888


Q ss_pred             HcCCCCCCEEEEEcCC
Q 020768          176 RANIGPETNVLIMGAG  191 (321)
Q Consensus       176 ~~~~~~g~~vlI~Gag  191 (321)
                      ..++++|++||| |+|
T Consensus       165 ~~~~~~G~~VlI-g~G  179 (185)
T d1pl8a1         165 TFKKGLGLKIML-KCD  179 (185)
T ss_dssp             HHHTTCCSEEEE-ECC
T ss_pred             HhCCCCCCEEEE-EeC
Confidence            888999999998 544

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=7.8e-35  Score=239.67  Aligned_cols=172  Identities=28%  Similarity=0.385  Sum_probs=151.5

Q ss_pred             cchhhceeEEEccCC-CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCC
Q 020768           13 DGEEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE   91 (321)
Q Consensus        13 ~~~~~~~a~~~~~~~-~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~   91 (321)
                      ++|+||||+++.+++ +++++|+|.|.|+++||||||.++++|++|++.++|.+...  ..+|+++|||++|+|+++|++
T Consensus         1 ~~P~tMkA~v~~~~g~pl~l~evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~~~--~~~P~i~GhE~~G~V~~~G~~   78 (175)
T d1llua1           1 TLPQTMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVK--PPLPFIPGHEGVGYVAAVGSG   78 (175)
T ss_dssp             CCCSEEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSSSC--CCSSBCCCSCEEEEEEEECTT
T ss_pred             CcchhcEEEEEEeCCCCCEEEEeECCCCCCCEEEEEEEEecCcccchhhhccCcccc--ccCCcCCCCcceEEEEEeCCC
Confidence            478999999999875 59999999999999999999999999999999999865422  567999999999999999999


Q ss_pred             CCCCCCCCEEEEcCCc-cCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhc-cchhhHH
Q 020768           92 VKTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA-MCEPLSV  169 (321)
Q Consensus        92 v~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa-~~~~~~~  169 (321)
                      +++|++||||.+.+.. .|+.|.+|..+.+++|.+....+. ..+|+|+||+++++++++++|++++++.++ ++.++.+
T Consensus        79 v~~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~G~-~~~gg~aey~~v~~~~~~~iPd~l~~~~a~~~~~~~~t  157 (175)
T d1llua1          79 VTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGY-SVNGGYAEYVLADPNYVGILPKNVKATIHPGKLDDINQ  157 (175)
T ss_dssp             CCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEECTTTSEECCTTCCCCEEEECGGGHHH
T ss_pred             ccccccCCEEEeccccccCCccccccCCccccccccccccc-ccccccceEEEechHHEEECCCCCChhHHHHHHhHHHH
Confidence            9999999999987644 799999999999999999887765 578999999999999999999999988766 4557778


Q ss_pred             HHHHHHHcCCCCCCEEEEE
Q 020768          170 GLHACRRANIGPETNVLIM  188 (321)
Q Consensus       170 a~~~l~~~~~~~g~~vlI~  188 (321)
                      +++.++... .+|++|||+
T Consensus       158 ~~~~~~~g~-~~G~~VLVl  175 (175)
T d1llua1         158 ILDQMRAGQ-IEGRIVLEM  175 (175)
T ss_dssp             HHHHHHTTC-CSSEEEEEC
T ss_pred             HHHHHHhCC-CCCCEEEeC
Confidence            887776554 469999984

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=100.00  E-value=7.7e-35  Score=242.90  Aligned_cols=170  Identities=22%  Similarity=0.324  Sum_probs=145.8

Q ss_pred             hhhceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCC
Q 020768           15 EEVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (321)
Q Consensus        15 ~~~~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~   93 (321)
                      |++|+|+++.+. ++|+++++|.|+|+++||||||.++++|++|++.+.|.+.    .++|+++|||++|+|+++|++|+
T Consensus         1 ~k~~~Aav~~~~g~~l~l~~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~~~----~~~P~i~GHE~~G~V~~vG~~v~   76 (194)
T d1f8fa1           1 LKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP----VPLPAVLGHEGSGIIEAIGPNVT   76 (194)
T ss_dssp             CEEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC----CCSSBCCCCEEEEEEEEECTTCC
T ss_pred             CceeEEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEEecCchHhhhhhccc----ccCCcccccceEEEeeecCccce
Confidence            468999999865 5799999999999999999999999999999999987653    56899999999999999999999


Q ss_pred             CCCCCCEEEEcCCccCCCCccccCCCCCCCCCcccc---cc-------------------CCCCCcceeEEEecCCcEEE
Q 020768           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT-------------------PPVHGSLANQVVHPADLCFK  151 (321)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~~G~~~~~~~v~~~~~~~  151 (321)
                      +|++||+|+..+ .+|++|.+|+.+.+++|++....   +.                   ....|+|+||+++++.++++
T Consensus        77 ~~~vGDrVv~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~~  155 (194)
T d1f8fa1          77 ELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVK  155 (194)
T ss_dssp             SCCTTCEEEECC-CCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEE
T ss_pred             eEccCceeeeec-ccccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEEehHHEEE
Confidence            999999996654 48999999999999999864211   11                   01248999999999999999


Q ss_pred             CCCCCChhhhccchhhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEE
Q 020768          152 LPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIV  212 (321)
Q Consensus       152 ip~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v  212 (321)
                      +|++++++++                       +++.|+|++|++++|+++.+|+++++++
T Consensus       156 ip~~i~~~~~-----------------------~~i~g~g~~g~~aiq~a~~~g~~~iiaV  193 (194)
T d1f8fa1         156 VTKDFPFDQL-----------------------VKFYAFDEINQAAIDSRKGITLKPIIKI  193 (194)
T ss_dssp             ECTTCCGGGG-----------------------EEEEEGGGHHHHHHHHHHTSCSEEEEEC
T ss_pred             CCCCCCcccE-----------------------EEEeCcHHHHHHHHHHHHHcCCCEEEEe
Confidence            9999886654                       3456779999999999999999877765

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=4.4e-35  Score=241.79  Aligned_cols=167  Identities=27%  Similarity=0.462  Sum_probs=147.1

Q ss_pred             chhhceeEEEccCC-CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCC
Q 020768           14 GEEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (321)
Q Consensus        14 ~~~~~~a~~~~~~~-~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v   92 (321)
                      |.++|||+++.+++ +|+++|++.|+|+++||||||.++|||++|+++++|.++.   .++|+++|||++|+|+++|++|
T Consensus         1 m~~k~kA~v~~~~~~pl~i~ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~~~---~~~P~vlGHE~~G~V~~vG~~v   77 (184)
T d1vj0a1           1 MGLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPR---VPLPIILGHEGAGRVVEVNGEK   77 (184)
T ss_dssp             CCEEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTT---CCSSBCCCCEEEEEEEEESSCC
T ss_pred             CCceEEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEECCCCCchhheeccCCc---cccccccceeeeeeeeEEeccc
Confidence            66789999999764 5999999999999999999999999999999999986532   4689999999999999999998


Q ss_pred             C-----CCCCCCEEEEcCCccCCCCccccCCCC-CCCCCccccccC-------CCCCcceeEEEec-CCcEEECCCCCCh
Q 020768           93 K-----TLVPGDRVALEPGISCWRCDHCKGGRY-NLCPEMKFFATP-------PVHGSLANQVVHP-ADLCFKLPDNVSL  158 (321)
Q Consensus        93 ~-----~~~~Gd~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-------~~~G~~~~~~~v~-~~~~~~ip~~~~~  158 (321)
                      +     .+++||+|++.+..+|++|.+|+.+.. ++|+++..+|..       ..+|+|+||++++ +.+++++|+++++
T Consensus        78 ~~~~~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae~~~v~~~~~v~~ip~~l~~  157 (184)
T d1vj0a1          78 RDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKITH  157 (184)
T ss_dssp             BCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTCCE
T ss_pred             cccccccccceeeeEeccccccccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcCcEEechhHcEEECCCCCCH
Confidence            6     468999999999999999999999975 679988776642       3589999999996 6899999999987


Q ss_pred             hhhccchhhHHHHHHHHHcCCCCCCEEEEE
Q 020768          159 EEGAMCEPLSVGLHACRRANIGPETNVLIM  188 (321)
Q Consensus       159 ~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~  188 (321)
                      ++     ++++|+++++.+++++|++|||+
T Consensus       158 ~~-----pl~~A~~a~~~~~~~~G~~VlI~  182 (184)
T d1vj0a1         158 RL-----PLKEANKALELMESREALKVILY  182 (184)
T ss_dssp             EE-----EGGGHHHHHHHHHHTSCSCEEEE
T ss_pred             HH-----HHHHHHHHHHHhCCCcCCEEEEe
Confidence            54     56678889999999999999997

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=100.00  E-value=1.2e-34  Score=237.24  Aligned_cols=167  Identities=29%  Similarity=0.506  Sum_probs=150.3

Q ss_pred             eeEEEccCC-CeEEEEecCCCC-CCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768           19 MAAWLLGVN-TLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (321)
Q Consensus        19 ~a~~~~~~~-~l~~~e~~~p~~-~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~   96 (321)
                      ||+++.+.+ +|+++|++.|++ +++||||||.+++||++|++.+.|.........+|+++|||++|+|+++|+++++|+
T Consensus         1 kA~~~~~~g~pl~i~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~   80 (171)
T d1h2ba1           1 KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLE   80 (171)
T ss_dssp             CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCCSCC
T ss_pred             CEEEEEeCCCCCEEEEeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCCCcCC
Confidence            688888765 599999999986 689999999999999999999988654433357899999999999999999999999


Q ss_pred             CCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhc-cchhhHHHHHHHH
Q 020768           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA-MCEPLSVGLHACR  175 (321)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa-~~~~~~~a~~~l~  175 (321)
                      +||||++.+...|++|..|+.+.+++|.+..+.+. ..+|+|+||+.+++++++++|++++++.++ ++.+++|+|++++
T Consensus        81 ~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~e~aa~~~~~~~ta~~al~  159 (171)
T d1h2ba1          81 KGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGL-NIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERLE  159 (171)
T ss_dssp             TTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTT-TBCCSSBSEEEECGGGEEECCTTCCCCEEEEEGGGHHHHHHHHH
T ss_pred             CCCEEEEcCccCCCCccccccccccccccccccee-ecccccceeeeehhhcceecCCCCCHHHHHHHHhHHHHHHHHHH
Confidence            99999999999999999999999999998877664 578999999999999999999999998666 5568999999998


Q ss_pred             HcCCCCCCEEEE
Q 020768          176 RANIGPETNVLI  187 (321)
Q Consensus       176 ~~~~~~g~~vlI  187 (321)
                      .+.+ .|++|||
T Consensus       160 ~~~~-~G~~VlI  170 (171)
T d1h2ba1         160 KGEV-LGRAVLI  170 (171)
T ss_dssp             TTCC-SSEEEEE
T ss_pred             hcCC-CCCEEEe
Confidence            8888 8999998

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=100.00  E-value=2.6e-34  Score=241.07  Aligned_cols=171  Identities=24%  Similarity=0.273  Sum_probs=149.2

Q ss_pred             hhhceeEEEccCC-CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCC
Q 020768           15 EEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (321)
Q Consensus        15 ~~~~~a~~~~~~~-~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~   93 (321)
                      ++|+||+++.+++ +++++|++.|+|+++||||||.++++|++|++.+.+....   ..+|.++|||++|+|+++|++++
T Consensus         6 ~~~~kAav~~~~~~pl~i~ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~~~---~~~p~i~GhE~~G~v~~vG~~v~   82 (199)
T d1cdoa1           6 VIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK---DGFPVVLGHEGAGIVESVGPGVT   82 (199)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT---TSCSEECCCCEEEEEEEECTTCC
T ss_pred             ceEEEEEEEecCCCCcEEEEEECCCCCCCEEEEEEEEEEEecchhhhhhhcccc---cccccccccccceEEEEEcCCCc
Confidence            4567799998764 7999999999999999999999999999999999885533   56799999999999999999999


Q ss_pred             CCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccC--------------------CCCCcceeEEEecCCcEEECC
Q 020768           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP--------------------PVHGSLANQVVHPADLCFKLP  153 (321)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~G~~~~~~~v~~~~~~~ip  153 (321)
                      +|++||||++.+..+|++|.+|+.+++++|.+.......                    ..+|+|+||+++++++++++|
T Consensus        83 ~~~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~~~~~~~iP  162 (199)
T d1cdoa1          83 EFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKID  162 (199)
T ss_dssp             SCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEECC
T ss_pred             eecCCCEEEEeeeccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEEEEEchHHEEECC
Confidence            999999999999999999999999999999764322111                    125999999999999999999


Q ss_pred             CCCChhhhccc-hhhHHHHHHHHH-cCCCCCCEEEEE
Q 020768          154 DNVSLEEGAMC-EPLSVGLHACRR-ANIGPETNVLIM  188 (321)
Q Consensus       154 ~~~~~~~aa~~-~~~~~a~~~l~~-~~~~~g~~vlI~  188 (321)
                      ++++++++|++ .++.+++.+++. ...+.|++|||+
T Consensus       163 ~~~~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         163 PSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             TTSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            99999997755 588899999965 677899999984

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=100.00  E-value=5e-34  Score=240.07  Aligned_cols=168  Identities=24%  Similarity=0.342  Sum_probs=144.8

Q ss_pred             hhhceeEEEccCC-CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCC
Q 020768           15 EEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (321)
Q Consensus        15 ~~~~~a~~~~~~~-~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~   93 (321)
                      ++||||+++.+++ +++++|+|.|+|+++||||||.+++||++|++.++|.++    ..+|+++|||++|+|+++|++|+
T Consensus         6 ~~~~KAaV~~~~g~pl~i~evp~P~p~~geVlVkv~a~gic~sD~~~~~G~~~----~~~P~v~GHE~~G~V~~vG~~V~   81 (202)
T d1e3ia1           6 VIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKK----ALFPVVLGHECAGIVESVGPGVT   81 (202)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTTSC----CCSSBCCCCEEEEEEEEECTTCC
T ss_pred             eEEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEeccccceeeeecc----cccccccccccceEEeeecCCce
Confidence            4589999999774 699999999999999999999999999999999988653    56799999999999999999999


Q ss_pred             CCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccC------------------------CCCCcceeEEEecCCcE
Q 020768           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP------------------------PVHGSLANQVVHPADLC  149 (321)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~G~~~~~~~v~~~~~  149 (321)
                      ++++||+|++.+...|+.|++|+.+.+++|.+...++..                        ..+|+|+||+++++.++
T Consensus        82 ~~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey~~v~~~~l  161 (202)
T d1e3ia1          82 NFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANL  161 (202)
T ss_dssp             SCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGE
T ss_pred             eccCCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEEEEEehhhE
Confidence            999999999999999999999999999999876544321                        12499999999999999


Q ss_pred             EECCCCCChhhhccc-hhhHHHHHHHHHcCCCCCCEEEEE
Q 020768          150 FKLPDNVSLEEGAMC-EPLSVGLHACRRANIGPETNVLIM  188 (321)
Q Consensus       150 ~~ip~~~~~~~aa~~-~~~~~a~~~l~~~~~~~g~~vlI~  188 (321)
                      +++|++++++.++.. .++.+.+.+++.  +++|++|.|+
T Consensus       162 ~~lP~~~~~~~~~~~~~~~~~~~~a~~~--~k~G~~V~vi  199 (202)
T d1e3ia1         162 ARVDDEFDLDLLVTHALPFESINDAIDL--MKEGKSIRTI  199 (202)
T ss_dssp             EECCTTSCGGGGEEEEEEGGGHHHHHHH--HHTTCCSEEE
T ss_pred             EECCCCCCHHHHHHHHHHHHHHHHHHHh--CCCCCEEEEE
Confidence            999999999876644 355666666654  4689998775

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.8e-33  Score=233.97  Aligned_cols=173  Identities=22%  Similarity=0.368  Sum_probs=150.9

Q ss_pred             cchhhceeEEEccC---CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeC
Q 020768           13 DGEEVNMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG   89 (321)
Q Consensus        13 ~~~~~~~a~~~~~~---~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG   89 (321)
                      ..|+|||+.++.++   ..+++++++.++++++||||||.++|||++|++.+.|.+..   .++|+++|||++|+|+++|
T Consensus         2 ~~P~~~ka~~~~~~~~~~~~~~~~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~~~---~~~P~i~GHE~~G~Vv~vG   78 (192)
T d1piwa1           2 SYPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGN---MKMPLVVGHEIVGKVVKLG   78 (192)
T ss_dssp             CTTTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSC---CCSSEECCCCEEEEEEEEC
T ss_pred             CCCceeEEEEEeCCCcCCcceEeeccCCCCCCCeEEEEEeeeCCCcchHHHHcCCCCC---CCCCcCcccccccchhhcc
Confidence            45789999999865   45788888877789999999999999999999999886532   5789999999999999999


Q ss_pred             CCC-CCCCCCCEEEEcCCc-cCCCCccccCCCCCCCCCccccc------cCCCCCcceeEEEecCCcEEECCCCCChhhh
Q 020768           90 SEV-KTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKLPDNVSLEEG  161 (321)
Q Consensus        90 ~~v-~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~a  161 (321)
                      +++ +.+++||||.+.+.. .|+.|.+|+.+.+++|.+....+      +...+|+|+||+++++++++++|+++++++|
T Consensus        79 ~~v~~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~Ggfaey~~v~~~~~~~iP~~l~~e~A  158 (192)
T d1piwa1          79 PKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVETL  158 (192)
T ss_dssp             TTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTCCEEEE
T ss_pred             cccccccCCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccccceeeEEEeehHHeEECCCCCCHHHH
Confidence            988 569999999887755 79999999999999998876543      3456899999999999999999999999888


Q ss_pred             ccchh-hHHHHHHHHHcCCCCCCEEEEE
Q 020768          162 AMCEP-LSVGLHACRRANIGPETNVLIM  188 (321)
Q Consensus       162 a~~~~-~~~a~~~l~~~~~~~g~~vlI~  188 (321)
                      +++.+ +.+||++++++++++|++|+|.
T Consensus       159 al~~~~~~ta~~~l~~~~vk~g~~Vvv~  186 (192)
T d1piwa1         159 PVGEAGVHEAFERMEKGDVRYRFTLVGY  186 (192)
T ss_dssp             ESSHHHHHHHHHHHHHTCCSSEEEEECC
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence            87765 6789999999999999999985

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=100.00  E-value=3.7e-33  Score=228.72  Aligned_cols=167  Identities=32%  Similarity=0.468  Sum_probs=146.5

Q ss_pred             ceeEEEccCC-CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768           18 NMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (321)
Q Consensus        18 ~~a~~~~~~~-~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~   96 (321)
                      |||+++.+.+ +|+++|+|.|+|+++||||||++++||++|++++++.....  ..+|+++|||++|+|+++|+++++++
T Consensus         1 MkA~v~~~~g~pl~i~~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~~~~--~~~p~v~GhE~~G~Vv~vG~~v~~~~   78 (171)
T d1rjwa1           1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVK--PKLPLIPGHEGVGIVEEVGPGVTHLK   78 (171)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSC--CCSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred             CeEEEEecCCCCcEEEEeECCCCCCCeEEEEEEEeeccccceeeeecccccc--cccccccCCEEEEEEEEecccccCce
Confidence            8999998764 59999999999999999999999999999999888654332  57799999999999999999999999


Q ss_pred             CCCEEEEcCCc-cCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHHHH
Q 020768           97 PGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACR  175 (321)
Q Consensus        97 ~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~  175 (321)
                      +||+|.+.+.. .|+.|..|..+..++|.+....+. ..+|+|+||+++++++++++|++++++.|+ +.+++++++.+.
T Consensus        79 vGdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~e~A~-l~~~~~~~~~~~  156 (171)
T d1rjwa1          79 VGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGY-SVDGGYAEYCRAAADYVVKIPDNTIIEVQP-LEKINEVFDRML  156 (171)
T ss_dssp             TTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGCEECCTTCCEEEEE-GGGHHHHHHHHH
T ss_pred             eeeEEeeccccccccccccccCCCccccccccccce-eccCccccceEecHHHEEECCCCCCHHHHH-HHHHHHHHHHHH
Confidence            99999987644 799999999999999998877664 578999999999999999999999986655 467788888876


Q ss_pred             HcCCCCCCEEEEEc
Q 020768          176 RANIGPETNVLIMG  189 (321)
Q Consensus       176 ~~~~~~g~~vlI~G  189 (321)
                      ++.+ +|++|||+|
T Consensus       157 ~~~~-~G~tVlViG  169 (171)
T d1rjwa1         157 KGQI-NGRVVLTLE  169 (171)
T ss_dssp             TTCC-SSEEEEECC
T ss_pred             hcCC-CCCEEEEeC
Confidence            6666 599999987

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=100.00  E-value=2.9e-33  Score=233.95  Aligned_cols=173  Identities=20%  Similarity=0.224  Sum_probs=147.7

Q ss_pred             cchhhceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCC
Q 020768           13 DGEEVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE   91 (321)
Q Consensus        13 ~~~~~~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~   91 (321)
                      +.+++|||+++.++ ++|+++|+|.|+|+++||||||+++|||++|+++++|.+..   ..+|+++|||++|+|+++|++
T Consensus         2 ~~~~~~kAav~~~~g~~l~i~evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~~~~---~~~p~v~GhE~~G~V~~vG~~   78 (197)
T d2fzwa1           2 NEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPE---GCFPVILGHLGAGIVESVGEG   78 (197)
T ss_dssp             CCCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTT---CCSSBCCCCEEEEEEEEECTT
T ss_pred             CCceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEecCCCCcHHHHcCCccc---ccccccCCcceeeEEEeecCC
Confidence            34667999999876 56999999999999999999999999999999999986533   578999999999999999999


Q ss_pred             CCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccc--------------------cCCCCCcceeEEEecCCcEEE
Q 020768           92 VKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA--------------------TPPVHGSLANQVVHPADLCFK  151 (321)
Q Consensus        92 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~G~~~~~~~v~~~~~~~  151 (321)
                      |+.+++||+|++.+..+|+.|.+|..+++++|.+.....                    +...+|+|+||+++++.++++
T Consensus        79 V~~~~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~~~~~~  158 (197)
T d2fzwa1          79 VTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAK  158 (197)
T ss_dssp             CCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEE
T ss_pred             ceecCCCCEEEEccccccccccccccCccccCccccccccccccCCccceeccCCcceecccccccceeEEEechHHEEE
Confidence            999999999999999999999999999999997642211                    111259999999999999999


Q ss_pred             CCCCCChhhhccch-hhHHHHHHHHH-cCCCCCCEEEEE
Q 020768          152 LPDNVSLEEGAMCE-PLSVGLHACRR-ANIGPETNVLIM  188 (321)
Q Consensus       152 ip~~~~~~~aa~~~-~~~~a~~~l~~-~~~~~g~~vlI~  188 (321)
                      +|++++++++|.+. ++.+++++++. ..-+.+++|||+
T Consensus       159 vp~~l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         159 IDPLIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             CCTTSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             CCCCCCHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            99999999988554 67778888754 233578888874

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=100.00  E-value=5.6e-33  Score=228.88  Aligned_cols=168  Identities=30%  Similarity=0.428  Sum_probs=144.8

Q ss_pred             ceeEEEccCC-CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccC-----CcCCCCCcccccceeEEEEEeCCC
Q 020768           18 NMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCA-----DFVVKEPMVIGHECAGVIEKVGSE   91 (321)
Q Consensus        18 ~~a~~~~~~~-~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~-----~~~~~~p~~~G~e~vG~V~~vG~~   91 (321)
                      |||+++++++ +|+++|+|.|+|+++||||||.+++||++|+++++|.+..     ....++|+++|||++|+|+++|++
T Consensus         1 MKA~~~~~~G~pl~i~dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~g~~   80 (177)
T d1jvba1           1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE   80 (177)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred             CeEEEEEeCCCCCEEEEeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEeeeccC
Confidence            8999999874 5999999999999999999999999999999999986532     122468999999999999999999


Q ss_pred             CCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCc-EEECCCCCChhhhcc-chhhHH
Q 020768           92 VKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL-CFKLPDNVSLEEGAM-CEPLSV  169 (321)
Q Consensus        92 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~-~~~ip~~~~~~~aa~-~~~~~~  169 (321)
                      +++|++||+|.+.+...|+.|.+|+.+++++|.+..+++. ..+|+|+||+++++.+ ++++|+..+.+.|+. ..++++
T Consensus        81 v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~g~-~~~G~~aey~~vp~~~~~~~~~~~~~~~~a~~~~~~~~~  159 (177)
T d1jvba1          81 VVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANE  159 (177)
T ss_dssp             CCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTT-TBCCSSBSEEEESCGGGEEECSSSCCCCEEEEEGGGHHH
T ss_pred             ccccccCceEeeeeccccccccccccccccccCCcceeee-ccccccccEEEEEhHHeEEECCCCChHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999887765 5789999999998655 556665555444443 358889


Q ss_pred             HHHHHHHcCCCCCCEEEE
Q 020768          170 GLHACRRANIGPETNVLI  187 (321)
Q Consensus       170 a~~~l~~~~~~~g~~vlI  187 (321)
                      ++++++.+++ .|++|||
T Consensus       160 a~~~~~~~~~-~G~~VlI  176 (177)
T d1jvba1         160 AIDNLENFKA-IGRQVLI  176 (177)
T ss_dssp             HHHHHHTTCC-CSEEEEE
T ss_pred             HHHHHHhhcc-cCCceEC
Confidence            9999988876 5899987

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=100.00  E-value=8.5e-36  Score=249.84  Aligned_cols=181  Identities=25%  Similarity=0.399  Sum_probs=149.5

Q ss_pred             ceeEEEccCCCeEEEEecCCCC-------CCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCC
Q 020768           18 NMAAWLLGVNTLKIQPFELPSL-------GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGS   90 (321)
Q Consensus        18 ~~a~~~~~~~~l~~~e~~~p~~-------~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~   90 (321)
                      +||+++++++.++++|+|.|++       +++||+|||.+++||++|++.++|..+    ..+|+++|||++|+|+++|+
T Consensus         2 ~kA~v~~~~~~le~~e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~~----~~~P~v~GHE~~G~Vv~vG~   77 (201)
T d1kola1           2 NRGVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT----AQVGLVLGHEITGEVIEKGR   77 (201)
T ss_dssp             EEEEEEEETTEEEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC----CCTTCBCCCCEEEEEEEECT
T ss_pred             cEEEEEeCCCceEEEEecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCcc----cccceeccceeeeeeecccc
Confidence            6999999999999999999865       469999999999999999999987643    56799999999999999999


Q ss_pred             CCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccc------c---ccCCCCCcceeEEEecC--CcEEECCCCCChh
Q 020768           91 EVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF------F---ATPPVHGSLANQVVHPA--DLCFKLPDNVSLE  159 (321)
Q Consensus        91 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~~G~~~~~~~v~~--~~~~~ip~~~~~~  159 (321)
                      +|++|++||||.+.+..+|++|++|+.++++.|.+...      +   .....+|+|+||+++|.  .+++++|++....
T Consensus        78 ~V~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~vp~~~~~l~~iPd~~~~~  157 (201)
T d1kola1          78 DVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAM  157 (201)
T ss_dssp             TCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHHHHH
T ss_pred             ccccccccceeEEeeeeeccCChhhhCCCcccccccccccccccccccCCCccccccccEEEeehHHCeEEECCCCCChH
Confidence            99999999999999999999999999999988865321      1   11256899999999985  4799999986555


Q ss_pred             hhc-cchhhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCC
Q 020768          160 EGA-MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA  206 (321)
Q Consensus       160 ~aa-~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~  206 (321)
                      +++ +..+++++++++.....+.++    +|+|++|++++|+||++|+
T Consensus       158 ~~~~~~~~~~~~~~a~~~~~~~~g~----~g~G~vG~~~i~~ak~~GA  201 (201)
T d1kola1         158 EKINIAEVVGVQVISLDDAPRGYGE----FDAGVPKKFVIDPHKTFSA  201 (201)
T ss_dssp             HTCCHHHHHTEEEECGGGHHHHHHH----HHHTCSCEEEECTTCSSCC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCCeE----EeeCHHHHHHHHHHHHcCC
Confidence            544 555666666666544433343    4889999999999999885

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.97  E-value=3e-32  Score=227.93  Aligned_cols=167  Identities=25%  Similarity=0.360  Sum_probs=140.1

Q ss_pred             hhceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768           16 EVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (321)
Q Consensus        16 ~~~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~   94 (321)
                      .||||+++.++ ++|+++|+|.|+|+++||||||.++++|++|+++++|..+    ..+|+++|||++|+|+++|+++++
T Consensus         7 ~~~KAav~~~~g~~l~i~ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~~~----~~~P~i~GHE~~G~Vv~~G~~v~~   82 (198)
T d1p0fa1           7 ITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP----SKFPVILGHEAVGVVESIGAGVTC   82 (198)
T ss_dssp             EEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC----CCSSBCCCCCEEEEEEEECTTCCS
T ss_pred             eEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEecccceeeeeccc----cccccccceeeeeeeeecCccccc
Confidence            48999999887 5799999999999999999999999999999999987653    568999999999999999999999


Q ss_pred             CCCCCEEEEcCCccCCCCccccCCCCCCCCCcccccc--------------------CCCCCcceeEEEecCCcEEECCC
Q 020768           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT--------------------PPVHGSLANQVVHPADLCFKLPD  154 (321)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~G~~~~~~~v~~~~~~~ip~  154 (321)
                      +++||+|++.+..+|++|.+|+.+.+++|.+..+.+.                    ...+|+|+||+.+++..++++|+
T Consensus        83 ~~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~faey~~v~~~~~~kip~  162 (198)
T d1p0fa1          83 VKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDP  162 (198)
T ss_dssp             CCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEECT
T ss_pred             CcCCCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccceeeEEecHHHEEECCC
Confidence            9999999999999999999999999999975443221                    11358999999999999999999


Q ss_pred             CCChhhhccch-hhHHHHHHHHHcCCCCCCEEEEEcCChhHH
Q 020768          155 NVSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGL  195 (321)
Q Consensus       155 ~~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~  195 (321)
                      +++...++... .+         ..+.++++|||.|+|++|+
T Consensus       163 ~~~~~~~~~~~~~~---------~~v~~~~~vlv~G~G~iGl  195 (198)
T d1p0fa1         163 KINVNFLVSTKLTL---------DQINKAFELLSSGQGVRSI  195 (198)
T ss_dssp             TSCGGGGEEEEECG---------GGHHHHHHHTTTSSCSEEE
T ss_pred             CCCHHHHHHhhcch---------hhcCCCCEEEEECCCcceE
Confidence            99877755332 21         1223345577888887775

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.97  E-value=1.2e-31  Score=219.89  Aligned_cols=168  Identities=29%  Similarity=0.353  Sum_probs=138.8

Q ss_pred             ceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCC
Q 020768           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (321)
Q Consensus        18 ~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~   97 (321)
                      ||++++.++++++++|+|.|.|+++||||||++++||++|++.+.+....   ..+|+++|||++|+|+++|+++++|++
T Consensus         1 MKa~v~~~~~~l~i~e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~~~~---~~~P~i~GhE~~G~V~~vG~~v~~~~v   77 (177)
T d1jqba1           1 MKGFAMLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALG---DRKNMILGHEAVGEVVEVGSEVKDFKP   77 (177)
T ss_dssp             CEEEEEEETTEEEEEECCCCCCCTTCEEEEEEEECCCHHHHHHHHHCTTC---CCSSEECCCCEEEEEEEECTTCCSCCT
T ss_pred             CeEEEEEeCCCeEEEEeeCCCCCCCEEEEEEEEEecCCCcccccccCCCC---CCCCccCcceeeEEeeecccccceecC
Confidence            89999999999999999999999999999999999999999887654332   467999999999999999999999999


Q ss_pred             CCEEEEcCCccCCCCccccCCCCCCCCCccc--cccCCCCCcceeEEEecC--CcEEECCCCCChhhhccchhhHHHHHH
Q 020768           98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKF--FATPPVHGSLANQVVHPA--DLCFKLPDNVSLEEGAMCEPLSVGLHA  173 (321)
Q Consensus        98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~G~~~~~~~v~~--~~~~~ip~~~~~~~aa~~~~~~~a~~~  173 (321)
                      ||||++.+..+|++|.+|+.+.+++|.+...  ..+...+|+|+||+++|.  .+++++|+++++.+++.....  ++..
T Consensus        78 GdrV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~G~~aEy~~vp~a~~~l~~iP~~~~~~~~~~~~~~--~~~~  155 (177)
T d1jqba1          78 GDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMNLAILPKDVDLSKLVTHVYH--GFDH  155 (177)
T ss_dssp             TCEEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBCCSSBSSEEESSHHHHCEECCTTSCGGGGEEEEEE--SGGG
T ss_pred             CCcEEEeeeeccccccchhhhhhcccccccccccccCCCChhcCeeEEEEhhhCeEEECCCCcchHHHHHHHHH--HHHH
Confidence            9999999999999999999999999987542  223457899999999996  479999999998877643221  1111


Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHH
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVT  197 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a  197 (321)
                      +       ++.++|+|+|++|+++
T Consensus       156 ~-------~~~vlv~g~gp~gl~a  172 (177)
T d1jqba1         156 I-------EEALLLMKDKPKDLIK  172 (177)
T ss_dssp             H-------HHHHHHHHHCCTTCSE
T ss_pred             h-------cCceEEECCCHHHhhe
Confidence            2       2346666776666543

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=3.8e-31  Score=217.45  Aligned_cols=158  Identities=23%  Similarity=0.355  Sum_probs=134.3

Q ss_pred             ceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (321)
Q Consensus        18 ~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~   96 (321)
                      |||+...++ ++|+++|+|.|+|+++||||||.+++||++|++.+.|....   ..+|+++|||++|+|+++|++|++++
T Consensus         1 m~a~~~~~~~~pl~i~ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~~~---~~~P~i~GhE~~G~V~~vG~~V~~~~   77 (179)
T d1uufa1           1 IKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAG---TVYPCVPGHEIVGRVVAVGDQVEKYA   77 (179)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSC---CCSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred             CeEEEEccCCCCCEEEEecCCCCCCCEEEEEEEEECCCCCcceeeeeeecc---ccccccccccccccchhhccccccCC
Confidence            789988865 57999999999999999999999999999999999986533   57799999999999999999999999


Q ss_pred             CCCEEEEcCC-ccCCCCccccCCCCCCCCCcccccc-------CCCCCcceeEEEecCCcEEECCCCCChhhhccchhhH
Q 020768           97 PGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFAT-------PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS  168 (321)
Q Consensus        97 ~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~  168 (321)
                      +||+|.+.+. .+|++|.+|+.+.+++|.++.+.+.       ...+|+|+||+++++++++++|+...  .++...++.
T Consensus        78 vGdrV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~~~~~~~ip~~~~--~~~~a~~l~  155 (179)
T d1uufa1          78 PGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRVADI--EMIRADQIN  155 (179)
T ss_dssp             TTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCCCCE--EEECGGGHH
T ss_pred             CCCEEEEcccccccCccccccCcccccCCCccccccccCCCCCcccccccceEEEechHHEEECCCCCc--ChhHhchhH
Confidence            9999988764 4899999999999999988653221       23469999999999999999996543  334456788


Q ss_pred             HHHHHHHHcCCC
Q 020768          169 VGLHACRRANIG  180 (321)
Q Consensus       169 ~a~~~l~~~~~~  180 (321)
                      ++++++.++.++
T Consensus       156 ~a~~a~~~a~v~  167 (179)
T d1uufa1         156 EAYERMLRGDVK  167 (179)
T ss_dssp             HHHHHHHTTCSS
T ss_pred             HHHHHHHHhCcc
Confidence            899998776654

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.97  E-value=8.3e-31  Score=219.48  Aligned_cols=168  Identities=23%  Similarity=0.293  Sum_probs=139.4

Q ss_pred             hhhceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCC
Q 020768           15 EEVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (321)
Q Consensus        15 ~~~~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~   93 (321)
                      ..+|||+++.++ ++|+++|+|.|+|+++||||||.++|||++|++.++|.++    .++|+++|||++|+|+++|++++
T Consensus         6 ~~k~KAavl~~~~~~l~i~ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~~~----~~~P~i~GHE~~G~Vv~vG~~v~   81 (198)
T d2jhfa1           6 VIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLV----TPLPVIAGHEAAGIVESIGEGVT   81 (198)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSC----CCSSBCCCCSEEEEEEEECTTCC
T ss_pred             ceEEEEEEEecCCCCCEEEEEECCCCCCCEEEEEEEEEecccccceeecCCcc----cccceecccceeEEEEecCcccc
Confidence            457999999765 5699999999999999999999999999999999998654    56799999999999999999999


Q ss_pred             CCCCCCEEEEcCCccCCCCccccCCCCCCCCCcccccc--------------------CCCCCcceeEEEecCCcEEECC
Q 020768           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT--------------------PPVHGSLANQVVHPADLCFKLP  153 (321)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~G~~~~~~~v~~~~~~~ip  153 (321)
                      ++++||+|++.+..+|+.|+.|+.+...+|.+......                    ...+|+|+||+++++.+++++|
T Consensus        82 ~~~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~fAEy~~v~~~~~~~~p  161 (198)
T d2jhfa1          82 TVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKID  161 (198)
T ss_dssp             SCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECC
T ss_pred             CcCCCCEEEEeeeecccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCcccCeEEeCHHHeEECC
Confidence            99999999999999999999999999999986543211                    1134899999999999999999


Q ss_pred             CCCChhhhccc-hhhHHHHHHHHHcCCCCCCEEEEE
Q 020768          154 DNVSLEEGAMC-EPLSVGLHACRRANIGPETNVLIM  188 (321)
Q Consensus       154 ~~~~~~~aa~~-~~~~~a~~~l~~~~~~~g~~vlI~  188 (321)
                      +.++++.++.. .++.....+.  ..+++|++|.|+
T Consensus       162 ~~~~~e~l~~~~~~~~~v~~g~--~~l~~G~~VaVi  195 (198)
T d2jhfa1         162 AAFALDPLITHVLPFEKINEGF--DLLRSGESIRTI  195 (198)
T ss_dssp             TTSCCGGGEEEEEEGGGHHHHH--HHHHTTCCSEEE
T ss_pred             CCCCHHHHHHHHHHHHhhhhCC--ceeeCCCEEEEE
Confidence            99988765532 2333222222  235789998875

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.6e-28  Score=196.17  Aligned_cols=143  Identities=21%  Similarity=0.314  Sum_probs=123.8

Q ss_pred             hceeEEEc---cCCCeEEE-EecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCC
Q 020768           17 VNMAAWLL---GVNTLKIQ-PFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (321)
Q Consensus        17 ~~~a~~~~---~~~~l~~~-e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v   92 (321)
                      -|||++++   +++.++++ |+|.|+|+++||||||.++++|++|++.++|.+...  ..+|.++|||++|+|+++|+++
T Consensus         2 ~MkAv~~~~~G~p~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~--~~~p~i~G~e~~G~V~~vG~~v   79 (150)
T d1yb5a1           2 LMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRK--PLLPYTPGSDVAGVIEAVGDNA   79 (150)
T ss_dssp             EEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCC--CCSSBCCCSCEEEEEEEECTTC
T ss_pred             ceeEEEEEccCCcceEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCcCcc--ccccccCccceeeeeEeeccee
Confidence            48999998   45678885 799999999999999999999999999998865432  5678999999999999999999


Q ss_pred             CCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHH
Q 020768           93 KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGL  171 (321)
Q Consensus        93 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~  171 (321)
                      ++|++||+|+..+                           ..+|+|+||+++++++++++|+++++++||.++ ...+++
T Consensus        80 ~~~~vGdrV~~~~---------------------------~~~G~~ae~~~v~~~~~~~iP~~ls~~~Aa~~~~~~~ta~  132 (150)
T d1yb5a1          80 SAFKKGDRVFTSS---------------------------TISGGYAEYALAADHTVYKLPEKLKPVIGSQYPLEKVAEA  132 (150)
T ss_dssp             TTCCTTCEEEESC---------------------------CSSCSSBSEEEEEGGGEEECCTTCCCCEEEEEEGGGHHHH
T ss_pred             eccccCccccccc---------------------------cccccccccccccccccccccCCCCHHHHHHhhhhhhheh
Confidence            9999999998753                           256999999999999999999999999998665 566777


Q ss_pred             HHH-HHcCCCCCCEEEEE
Q 020768          172 HAC-RRANIGPETNVLIM  188 (321)
Q Consensus       172 ~~l-~~~~~~~g~~vlI~  188 (321)
                      +++ ..+..+.|+++||+
T Consensus       133 ~~~~~~g~~~~G~~vliL  150 (150)
T d1yb5a1         133 HENIIHGSGATGKMILLL  150 (150)
T ss_dssp             HHHHHHSSCCSSEEEEEC
T ss_pred             hhheEEcCcccCCEEEEC
Confidence            776 56788999999984

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.95  E-value=1.9e-27  Score=194.21  Aligned_cols=156  Identities=46%  Similarity=0.724  Sum_probs=142.3

Q ss_pred             CChhhhccchhhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCC
Q 020768          156 VSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST  235 (321)
Q Consensus       156 ~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~  235 (321)
                      +|+++||+++|++|+|++++++++++|++|+|+|+|++|++++|+|+++|+ +|++++.+++|+++++++|++..++++.
T Consensus         1 VS~e~Aal~ePla~a~~a~~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~Ga-~vi~v~~~~~r~~~a~~~ga~~~~~~~~   79 (170)
T d1e3ja2           1 VSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVVDP   79 (170)
T ss_dssp             SCHHHHHTHHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEECCT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcccccchhhHhhHhhhcc-cccccchHHHHHHHHHHcCCcEEEeccc
Confidence            578999999999999999999999999999999999999999999999999 7999999999999999999999887776


Q ss_pred             CcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehhH
Q 020768          236 NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFF  312 (321)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~  312 (321)
                      ...+..+..+.+.+..+.++|++|||+|++..++.++++++++|+++++|....+.++|+..++.|+++|.|++.+.
T Consensus        80 ~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~k~i~i~gs~~~~  156 (170)
T d1e3ja2          80 AKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYC  156 (170)
T ss_dssp             TTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCCCCCHHHHHTTTCEEEECCSCS
T ss_pred             cccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCCCCCCcCHHHHHHCCCEEEEEECCH
Confidence            66666666677766668899999999999989999999999999999999887778899999999999999998653

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.2e-27  Score=194.08  Aligned_cols=154  Identities=43%  Similarity=0.729  Sum_probs=139.8

Q ss_pred             CChhhhccchhhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCC
Q 020768          156 VSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST  235 (321)
Q Consensus       156 ~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~  235 (321)
                      +|+++||+++|++|+|++++++++++|++|+|+|+|++|++++|+|+++|+++|++++.+++|+++++++|++.+++.++
T Consensus         1 vS~e~Aal~epla~a~~a~~~~~~~~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~   80 (171)
T d1pl8a2           1 VTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISK   80 (171)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCcccccccc
Confidence            47899999999999999999999999999999999999999999999999988999999999999999999999988654


Q ss_pred             CcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehh
Q 020768          236 NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF  311 (321)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~  311 (321)
                        .++.+..+.+....+.++|++|||+|++..++.++++++++|+++++|....+.++|+..+++|+++++|++.+
T Consensus        81 --~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~~~~~~~~~~~~~k~l~i~Gs~~~  154 (171)
T d1pl8a2          81 --ESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRY  154 (171)
T ss_dssp             --CCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEEEECCSC
T ss_pred             --cccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCCCCCccCHHHHHHCCcEEEEEeCC
Confidence              44555555555556789999999999999999999999999999999988778899999999999999999865

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=5.1e-27  Score=186.90  Aligned_cols=139  Identities=23%  Similarity=0.235  Sum_probs=117.6

Q ss_pred             eeEEEcc---CCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCC
Q 020768           19 MAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (321)
Q Consensus        19 ~a~~~~~---~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~   95 (321)
                      +++.+..   ++.|+++|++.|+|+++||+|||.++++|++|+++++|.+..   ..+|.++|||++|+|+++|+++++|
T Consensus         2 ~~i~~~~~G~pe~l~~~e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~~~---~~~p~~~G~e~~G~V~~vG~~v~~~   78 (147)
T d1qora1           2 TRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPP---PSLPSGLGTEAAGIVSKVGSGVKHI   78 (147)
T ss_dssp             EEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC---SSSSBCCCSCEEEEEEEECTTCCSC
T ss_pred             eEEEEcccCCCceeEEEEecCCCCCCCEEEEEEEEecccceeeeeecCCCCC---Ccceeeeccccccceeeeeeecccc
Confidence            3455553   456999999999999999999999999999999999987643   5689999999999999999999999


Q ss_pred             CCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhc--cc-hhhHHHHH
Q 020768           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MC-EPLSVGLH  172 (321)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa--~~-~~~~~a~~  172 (321)
                      ++||+|+...                           ...|+|+||+.++.+.++++|+++++++|+  .+ ...+++++
T Consensus        79 ~vGdrV~~~~---------------------------~~~G~~ae~~~v~~~~~~~~P~~~~~~~a~a~~~~~~~~~~~~  131 (147)
T d1qora1          79 KAGDRVVYAQ---------------------------SALGAYSSVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQRAH  131 (147)
T ss_dssp             CTTCEEEESC---------------------------CSSCCSBSEEEEEGGGEEECCTTSCCCCCGGGEEEGGGHHHHH
T ss_pred             cccceeeeec---------------------------cccccceeEEEEehHHeEEcCcccchHHHHHHHHHHHHHHHHH
Confidence            9999997531                           245999999999999999999999887554  33 25567777


Q ss_pred             HHHHcCCCCCCEEEE
Q 020768          173 ACRRANIGPETNVLI  187 (321)
Q Consensus       173 ~l~~~~~~~g~~vlI  187 (321)
                      ++...++++|++|||
T Consensus       132 ~l~~~~~~~G~~VLI  146 (147)
T d1qora1         132 EILESRATQGSSLLI  146 (147)
T ss_dssp             HHHHTTCCCBCCEEE
T ss_pred             HHHHhCCCCCCEEEe
Confidence            776678999999998

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.94  E-value=8.2e-27  Score=186.71  Aligned_cols=147  Identities=18%  Similarity=0.077  Sum_probs=118.4

Q ss_pred             hhhceeEEEccCC---CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCC
Q 020768           15 EEVNMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE   91 (321)
Q Consensus        15 ~~~~~a~~~~~~~---~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~   91 (321)
                      |.+|||+++.+.+   .++++++|.|+|++|||||||.+++||++|++.+.|.+..  ....|+++|+|++|+|++  .+
T Consensus         1 m~~~KA~v~~~~~~~~~~~i~~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~~~--~~~~p~v~g~e~~G~v~~--~~   76 (152)
T d1xa0a1           1 MSAFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKI--VKTYPFVPGIDLAGVVVS--SQ   76 (152)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSS--CCSSSBCCCSEEEEEEEE--CC
T ss_pred             CCceEEEEEEecCCceEEEEEEccCCCCCCCEEEEEEEEeCCChHHHHHHhhcccc--cccccceeeeeeeeeeec--cC
Confidence            5679999998543   4678999999999999999999999999999988886432  256799999999999999  66


Q ss_pred             CCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHH
Q 020768           92 VKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVG  170 (321)
Q Consensus        92 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a  170 (321)
                      ++.|++||+|......                      .+...+|+|+||+++|+++++++|++++. +||.+ .+..|+
T Consensus        77 ~~~~~~g~~v~~~~~~----------------------~~~~~~G~~aEy~~v~~~~~~~iP~~l~~-~aa~l~~a~~ta  133 (152)
T d1xa0a1          77 HPRFREGDEVIATGYE----------------------IGVTHFGGYSEYARLHGEWLVPLPKGLER-IAQEISLAELPQ  133 (152)
T ss_dssp             SSSCCTTCEEEEESTT----------------------BTTTBCCSSBSEEEECGGGCEECCTTHHH-HEEEEEGGGHHH
T ss_pred             CCccccCCEEEEecCc----------------------cccccCCCcceeeeehhhccccCCCCCCH-HHHHHHHHHHHH
Confidence            7889999999865211                      11245799999999999999999999985 55544 355566


Q ss_pred             HHHH-HHcCCCCCCEEEEEc
Q 020768          171 LHAC-RRANIGPETNVLIMG  189 (321)
Q Consensus       171 ~~~l-~~~~~~~g~~vlI~G  189 (321)
                      +.++ ...+++ |++|||+|
T Consensus       134 ~~~~~~~~~~~-G~tVL~l~  152 (152)
T d1xa0a1         134 ALKRILRGELR-GRTVVRLA  152 (152)
T ss_dssp             HHHHHHHTCCC-SEEEEECC
T ss_pred             HHHHHHhcCCC-CCEEEEcC
Confidence            6665 567775 99999975

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.93  E-value=1.1e-25  Score=184.08  Aligned_cols=152  Identities=24%  Similarity=0.347  Sum_probs=131.5

Q ss_pred             CChhhhccc-hhhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecC
Q 020768          156 VSLEEGAMC-EPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS  234 (321)
Q Consensus       156 ~~~~~aa~~-~~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~  234 (321)
                      +|+++|+++ ++++|+|++++.+++++|++|+|+|+|++|++++|+||.+|+++|++++++++|+++++++|++++++++
T Consensus         1 ip~e~A~~l~~~~~ta~~a~~~a~~~~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~~   80 (174)
T d1jqba2           1 MPLENAVMITDMMTTGFHGAELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYK   80 (174)
T ss_dssp             SCHHHHHTTTTHHHHHHHHHHHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEECGG
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhhhhhhhcccccccccccchhhhHHHHHhhCcccccccc
Confidence            478899877 6899999999999999999999999999999999999999998899999999999999999999999875


Q ss_pred             CCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchh----hhccceEEEEeeh
Q 020768          235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTP----AAARYLIYSFLFH  310 (321)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~k~~~i~g~~~  310 (321)
                      +  +++.+.+.++.  .+.++|++|||+|++..++.++++++++|+++++|..+....+++..    ...+++++.|+..
T Consensus        81 ~--~~~~~~v~~~t--~g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~  156 (174)
T d1jqba2          81 N--GHIEDQVMKLT--NGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLC  156 (174)
T ss_dssp             G--SCHHHHHHHHT--TTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSSSEEEEETTTTGGGTBCCEEEEBCC
T ss_pred             c--hhHHHHHHHHh--hccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecCCCCcCcCcHhHHHHHhCccEEEEecC
Confidence            4  56777776653  47789999999999889999999999999999999876654444332    3558899999875


Q ss_pred             h
Q 020768          311 F  311 (321)
Q Consensus       311 ~  311 (321)
                      .
T Consensus       157 ~  157 (174)
T d1jqba2         157 P  157 (174)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.93  E-value=6.9e-26  Score=176.13  Aligned_cols=129  Identities=21%  Similarity=0.229  Sum_probs=111.6

Q ss_pred             ceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (321)
Q Consensus        18 ~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~   96 (321)
                      |||+++.+. +.++++|++.|+|+++||+|||+++++|++|++.++|.+...  ..+|+++|||++|+|           
T Consensus         1 MkA~~~~~~G~~l~~~e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~~~--~~~P~v~G~E~~G~V-----------   67 (131)
T d1iz0a1           1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTR--LHPPFIPGMEVVGVV-----------   67 (131)
T ss_dssp             CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSC--CCSSBCCCCEEEEEE-----------
T ss_pred             CcEEEEccCCCCCEEEEccCCCCCCCEEEEEEEEEecccccccccccccccc--ccceeEeeeeeEEee-----------
Confidence            899999876 459999999999999999999999999999999999875432  578999999999999           


Q ss_pred             CCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHHHH
Q 020768           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR  175 (321)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l~  175 (321)
                      +||+|...                            ..+|+|+||+++++++++++|+++++++||.+. .+.|||+++.
T Consensus        68 vGd~V~~~----------------------------~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~Ta~~al~  119 (131)
T d1iz0a1          68 EGRRYAAL----------------------------VPQGGLAERVAVPKGALLPLPEGRPVVGPVFPFAEAEAAFRALL  119 (131)
T ss_dssp             TTEEEEEE----------------------------CSSCCSBSEEEEEGGGCEECCTTCCCEEEEEEGGGHHHHHHHTT
T ss_pred             ccceEEEE----------------------------eccCccceeeeeCHHHeEEccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            39999875                            246999999999999999999999999999764 7889999985


Q ss_pred             HcCCCCCCEEEEE
Q 020768          176 RANIGPETNVLIM  188 (321)
Q Consensus       176 ~~~~~~g~~vlI~  188 (321)
                      ... +.|++||++
T Consensus       120 ~~g-~~g~tvl~l  131 (131)
T d1iz0a1         120 DRG-HTGKVVVRL  131 (131)
T ss_dssp             CTT-CCBEEEEEC
T ss_pred             hcc-cCCCEEEEC
Confidence            422 569998863

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.93  E-value=1.9e-25  Score=182.12  Aligned_cols=159  Identities=24%  Similarity=0.266  Sum_probs=140.5

Q ss_pred             CChhhhccch-hhHHHHHHHHHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEec
Q 020768          156 VSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV  233 (321)
Q Consensus       156 ~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~  233 (321)
                      +++.+||.++ ...|||+++++.++++|++|+|+|+ |++|++++|+++++|...|++++.+++|.++++++|++.++++
T Consensus         1 l~~~eAA~l~c~~~Ta~~al~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~~   80 (170)
T d1jvba2           1 LNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINA   80 (170)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeecc
Confidence            4678888776 5678999999999999999999997 9999999999999998899999999999999999999999886


Q ss_pred             CCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehhHH
Q 020768          234 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFL  313 (321)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~  313 (321)
                      ++  .++.+.+++.  +.+.++|++|||+|++..++.++++++++|+++++|....+.+++...+++|+++++|++.+++
T Consensus        81 ~~--~~~~~~~~~~--~~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~i~i~Gs~~~~~  156 (170)
T d1jvba2          81 SM--QDPLAEIRRI--TESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQ  156 (170)
T ss_dssp             TT--SCHHHHHHHH--TTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCCCCCHHHHHHHTCEEEECCSCCH
T ss_pred             CC--cCHHHHHHHH--hhcccchhhhcccccchHHHhhhhhcccCCEEEEeccccCccccCHHHHHhCCcEEEEEecCCH
Confidence            53  5666666554  3467899999999999899999999999999999998888889999999999999999999887


Q ss_pred             Hhhcc
Q 020768          314 IVLGY  318 (321)
Q Consensus       314 ~~~~~  318 (321)
                      ..+..
T Consensus       157 ~d~~~  161 (170)
T d1jvba2         157 SDFLG  161 (170)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            76654

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=5.4e-25  Score=180.18  Aligned_cols=150  Identities=22%  Similarity=0.281  Sum_probs=130.7

Q ss_pred             CChhhhccch-hhHHHHHHHH-HcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEe
Q 020768          156 VSLEEGAMCE-PLSVGLHACR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVK  232 (321)
Q Consensus       156 ~~~~~aa~~~-~~~~a~~~l~-~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~  232 (321)
                      +|+++||.++ ++.|||+++. .+++++|++|||+|+ |++|++++|+|+++|+ ++++++++++|.++++++|++++++
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~vi~   79 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFN   79 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEE
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCc-ccccccccccccccccccCcccccc
Confidence            4788988665 7889999985 578999999999997 9999999999999999 6888888999999999999999998


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehhH
Q 020768          233 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFF  312 (321)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~  312 (321)
                      +++  .++.+.+++.  +.+.++|++||++|+ ..++.++++++++|+++.+|.. ++.+++...++.|+++++|++.+.
T Consensus        80 ~~~--~~~~~~i~~~--t~~~g~d~v~d~~g~-~~~~~~~~~l~~~G~iv~~G~~-~~~~~~~~~~~~k~~~i~g~~~~~  153 (174)
T d1yb5a2          80 HRE--VNYIDKIKKY--VGEKGIDIIIEMLAN-VNLSKDLSLLSHGGRVIVVGSR-GTIEINPRDTMAKESSIIGVTLFS  153 (174)
T ss_dssp             TTS--TTHHHHHHHH--HCTTCEEEEEESCHH-HHHHHHHHHEEEEEEEEECCCC-SCEEECTHHHHTTTCEEEECCGGG
T ss_pred             ccc--ccHHHHhhhh--hccCCceEEeecccH-HHHHHHHhccCCCCEEEEEecC-CCCCCCHHHHHHCCCEEEEEEecC
Confidence            654  5777777665  347889999999995 6899999999999999999964 456788888999999999998664

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.92  E-value=5.1e-25  Score=178.91  Aligned_cols=156  Identities=25%  Similarity=0.274  Sum_probs=136.1

Q ss_pred             CChhhhccch-hhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecC
Q 020768          156 VSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS  234 (321)
Q Consensus       156 ~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~  234 (321)
                      +++++||.++ +..|+|++++++++++|++|+|+|+|++|++++|+||.+|+ +|++++++++|+++++++|+++++++.
T Consensus         1 v~f~~aA~l~ca~~Ta~~al~~~~~~~g~~VlV~GaG~vG~~~~~~ak~~G~-~Vi~~~~~~~~~~~a~~~Ga~~~i~~~   79 (166)
T d1llua2           1 VEFAEIAPILCAGVTVYKGLKQTNARPGQWVAISGIGGLGHVAVQYARAMGL-HVAAIDIDDAKLELARKLGASLTVNAR   79 (166)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEETT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEeeccccHHHHHHHHHHcCC-ccceecchhhHHHhhhccCcccccccc
Confidence            4788988776 66789999999999999999999999999999999999997 799999999999999999999999865


Q ss_pred             CCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehhHHH
Q 020768          235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFLI  314 (321)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~  314 (321)
                      +  .++.+.+.+.    ..+.|.++++++++..++.++++++++|+++.+|....+.++|..++++|+++|+|++.+++.
T Consensus        80 ~--~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~Gs~~~~~~  153 (166)
T d1llua2          80 Q--EDPVEAIQRD----IGGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPGDFPTPIFDVVLKGLHIAGSIVGTRA  153 (166)
T ss_dssp             T--SCHHHHHHHH----HSSEEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHH
T ss_pred             c--hhHHHHHHHh----hcCCcccccccccchHHHHHHHHhcCCcEEEEEEecCCCccCCHHHHHhCCcEEEEEeecCHH
Confidence            4  4566555543    246777888888889999999999999999999988778899999999999999999988877


Q ss_pred             hhcc
Q 020768          315 VLGY  318 (321)
Q Consensus       315 ~~~~  318 (321)
                      ++-.
T Consensus       154 d~~e  157 (166)
T d1llua2         154 DLQE  157 (166)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6544

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.92  E-value=7.9e-25  Score=180.48  Aligned_cols=157  Identities=21%  Similarity=0.283  Sum_probs=127.9

Q ss_pred             hhhc-cchhhHHHHHHHHH-cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCC
Q 020768          159 EEGA-MCEPLSVGLHACRR-ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTN  236 (321)
Q Consensus       159 ~~aa-~~~~~~~a~~~l~~-~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~  236 (321)
                      +.+| +..+.+|||+++.+ .++++|++|||+|+|++|++++|+|+++|+.+|++++.+++|+++++++|++.++++.+ 
T Consensus         4 ~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~-   82 (182)
T d1vj0a2           4 DVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRE-   82 (182)
T ss_dssp             HHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTT-
T ss_pred             HHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECCCccchhheecccccccccccccccccccccccccccceEEEeccc-
Confidence            4444 44467899999965 78999999999999999999999999999988999999999999999999999998754 


Q ss_pred             cccHHHHHHHHHH-HhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccc--cc-hhhhccceEEEEeehhH
Q 020768          237 LQDIAEEVEKIQK-AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTV--PL-TPAAARYLIYSFLFHFF  312 (321)
Q Consensus       237 ~~~~~~~~~~~~~-~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~--~~-~~~~~k~~~i~g~~~~~  312 (321)
                       .+..+..+++.+ ..+.++|+||||+|++..++.++++++++|+++++|...+..++  +. ..+++|+++++|++.+.
T Consensus        83 -~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~l~~k~l~i~G~~~~~  161 (182)
T d1vj0a2          83 -TSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSD  161 (182)
T ss_dssp             -SCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCCC
T ss_pred             -cchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeecCCCCccccccHHHHHHCCcEEEEEEeCC
Confidence             344444333333 24678999999999988999999999999999999976554444  43 23788999999999987


Q ss_pred             HHhhc
Q 020768          313 LIVLG  317 (321)
Q Consensus       313 ~~~~~  317 (321)
                      ...+-
T Consensus       162 ~~~~~  166 (182)
T d1vj0a2         162 TSHFV  166 (182)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            66553

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.92  E-value=2.4e-24  Score=175.91  Aligned_cols=154  Identities=27%  Similarity=0.408  Sum_probs=130.0

Q ss_pred             Chhhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecC
Q 020768          157 SLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS  234 (321)
Q Consensus       157 ~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~  234 (321)
                      ++++||++. .+.|+|+++ +.+++++||+|+|+|+|++|++++|+|+++|+++|++++.+++|+++++++|+++++++.
T Consensus         2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~   81 (174)
T d1e3ia2           2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPR   81 (174)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCc
Confidence            467788776 578999997 569999999999999999999999999999999999999999999999999999999865


Q ss_pred             CCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccC-CEEEEEcCCCCCccccchhhhccceEEEEeehhHH
Q 020768          235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFL  313 (321)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~  313 (321)
                      ..+.......+.   +.++++|++|||+|.+..++.++++++++ |+++++|....+.+++..++++ +.+|+|++..++
T Consensus        82 ~~~~~~~~~~~~---~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~~~~i~~~~~~~-~k~i~Gs~~Gs~  157 (174)
T d1e3ia2          82 ELDKPVQDVITE---LTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVIL-GRSINGTFFGGW  157 (174)
T ss_dssp             GCSSCHHHHHHH---HHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHHHHHT-TCEEEECSGGGC
T ss_pred             cchhhhhhhHhh---hhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCCccccchHHHhc-cCEEEEEEeeCC
Confidence            543333333322   34789999999999999999999999996 9999999887778888777654 679999987654


Q ss_pred             H
Q 020768          314 I  314 (321)
Q Consensus       314 ~  314 (321)
                      +
T Consensus       158 ~  158 (174)
T d1e3ia2         158 K  158 (174)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.92  E-value=2.9e-24  Score=175.76  Aligned_cols=152  Identities=24%  Similarity=0.380  Sum_probs=131.9

Q ss_pred             CChhhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEec
Q 020768          156 VSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV  233 (321)
Q Consensus       156 ~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~  233 (321)
                      ++++.|+.++ .+.|+|+++ +.+++++|++|+|+|+|++|++++|+|+++|++++++++.+++|+++++++|+++++++
T Consensus         1 vP~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~   80 (174)
T d1f8fa2           1 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINS   80 (174)
T ss_dssp             SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEET
T ss_pred             CCHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeC
Confidence            3567777766 477899886 56899999999999999999999999999999888999999999999999999999986


Q ss_pred             CCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC--CccccchhhhccceEEEEeehh
Q 020768          234 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL--EMTVPLTPAAARYLIYSFLFHF  311 (321)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~k~~~i~g~~~~  311 (321)
                      ++  +++.+.++++   .++++|+||||+|++..++.+++.++++|+++++|....  ..+++..++++|+++++|+...
T Consensus        81 ~~--~~~~~~i~~~---t~gg~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~k~~~i~Gs~~g  155 (174)
T d1f8fa2          81 KT--QDPVAAIKEI---TDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEG  155 (174)
T ss_dssp             TT--SCHHHHHHHH---TTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGG
T ss_pred             CC--cCHHHHHHHH---cCCCCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecCCCcccccCHHHHHHCCCEEEEEEec
Confidence            54  5677777665   346899999999999999999999999999999997543  4678899999999999999754


Q ss_pred             H
Q 020768          312 F  312 (321)
Q Consensus       312 ~  312 (321)
                      +
T Consensus       156 ~  156 (174)
T d1f8fa2         156 S  156 (174)
T ss_dssp             G
T ss_pred             C
Confidence            4

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.91  E-value=1.6e-24  Score=176.66  Aligned_cols=147  Identities=23%  Similarity=0.337  Sum_probs=122.3

Q ss_pred             CChhhhccch-hhHHHHHHHHHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEec
Q 020768          156 VSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV  233 (321)
Q Consensus       156 ~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~  233 (321)
                      +++++||.++ ++.|||++++++++++||+|||+|+ |++|++++|+||++|+ +|++++++++|.++++++|+++++++
T Consensus         1 ls~eeAA~l~~~~~TA~~al~~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~-~vi~~~~~~~~~~~~~~lGa~~~i~~   79 (171)
T d1iz0a2           1 LSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAATY   79 (171)
T ss_dssp             CCHHHHHTSHHHHHHHHHHHHHTTCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEEG
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccchhhhhhhhccccc-ccccccccccccccccccccceeeeh
Confidence            4788988665 7889999999899999999999997 9999999999999999 68888899999999999999999986


Q ss_pred             CCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-CccccchhhhccceEEEEeehhH
Q 020768          234 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARYLIYSFLFHFF  312 (321)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~~  312 (321)
                      .+    .   ..+.  +.+.++|+|||++|.  .++.++++++++|+++.+|...+ ..+++...++.|++++.|++...
T Consensus        80 ~~----~---~~~~--~~~~g~D~v~d~~G~--~~~~~~~~l~~~G~~v~~G~~~g~~~~~~~~~~~~k~~~i~g~~~~~  148 (171)
T d1iz0a2          80 AE----V---PERA--KAWGGLDLVLEVRGK--EVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTP  148 (171)
T ss_dssp             GG----H---HHHH--HHTTSEEEEEECSCT--THHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEEECCHHH
T ss_pred             hh----h---hhhh--hccccccccccccch--hHHHHHHHHhcCCcEEEEeCCCCCCCCccHHHHHHCCcEEEEEeCcC
Confidence            42    2   2222  236789999999883  67999999999999999997654 56888999999999999998765


Q ss_pred             HH
Q 020768          313 LI  314 (321)
Q Consensus       313 ~~  314 (321)
                      +.
T Consensus       149 ~~  150 (171)
T d1iz0a2         149 LL  150 (171)
T ss_dssp             HT
T ss_pred             hh
Confidence            53

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.91  E-value=1.7e-24  Score=176.87  Aligned_cols=156  Identities=22%  Similarity=0.327  Sum_probs=132.1

Q ss_pred             hhhhccc-hhhHHHHHHHHHc--CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecC
Q 020768          158 LEEGAMC-EPLSVGLHACRRA--NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS  234 (321)
Q Consensus       158 ~~~aa~~-~~~~~a~~~l~~~--~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~  234 (321)
                      +.++|.+ .++.|+|+++++.  .+++|++|+|+|+|++|++++|+++++|+.++++++++++|+++++++|++++++++
T Consensus         6 l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~   85 (172)
T d1h2ba2           6 LVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDAR   85 (172)
T ss_dssp             HHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETT
T ss_pred             HHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecCc
Confidence            3455544 4788999999763  589999999999999999999999999998999999999999999999999999865


Q ss_pred             CCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehhHHH
Q 020768          235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFLI  314 (321)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~  314 (321)
                      +   +..+...+.  +.+.++|++|||+|+..+++.++++++++|+++++|.. .+.++|..++++|+++|+|++.+++.
T Consensus        86 ~---~~~~~~~~~--~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~-~~~~~~~~~l~~k~~~i~Gs~~~~~~  159 (172)
T d1h2ba2          86 R---DPVKQVMEL--TRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYG-GELRFPTIRVISSEVSFEGSLVGNYV  159 (172)
T ss_dssp             S---CHHHHHHHH--TTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCS-SCCCCCHHHHHHTTCEEEECCSCCHH
T ss_pred             c---cHHHHHHHh--hCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCc-ccccCCHHHHHhCCcEEEEEEecCHH
Confidence            4   333333332  34778999999999988999999999999999999964 45789999999999999999998887


Q ss_pred             hhccc
Q 020768          315 VLGYS  319 (321)
Q Consensus       315 ~~~~~  319 (321)
                      .+..+
T Consensus       160 d~~~~  164 (172)
T d1h2ba2         160 ELHEL  164 (172)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            76544

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.91  E-value=1.4e-24  Score=177.14  Aligned_cols=146  Identities=19%  Similarity=0.182  Sum_probs=122.3

Q ss_pred             CChhhhccch-hhHHHHHHHH----HcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCe
Q 020768          156 VSLEEGAMCE-PLSVGLHACR----RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN  229 (321)
Q Consensus       156 ~~~~~aa~~~-~~~~a~~~l~----~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~  229 (321)
                      +++++||.++ +..|||++++    ....++|++|||+|+ |++|.+++|+||++|+ +|+++.++++|.++++++|+++
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga-~Viat~~s~~k~~~~~~lGa~~   79 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGAKE   79 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTCSE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCC-ceEEecCchHHHHHHHhcccce
Confidence            5789999887 6679997754    367889999999988 9999999999999999 5888989999999999999999


Q ss_pred             EEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-CccccchhhhccceEEEEe
Q 020768          230 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARYLIYSFL  308 (321)
Q Consensus       230 vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~  308 (321)
                      ++++++   ++.+..   ..+.+.++|+|||++|+ ..++..+++|+++|+++.+|...+ ..++|+.+++.|++++.|+
T Consensus        80 vi~~~~---~~~~~~---~~~~~~gvD~vid~vgg-~~~~~~l~~l~~~Griv~~G~~~g~~~~~~~~~~~~k~~~i~Gv  152 (176)
T d1xa0a2          80 VLARED---VMAERI---RPLDKQRWAAAVDPVGG-RTLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGI  152 (176)
T ss_dssp             EEECC---------------CCSCCEEEEEECSTT-TTHHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEEC
T ss_pred             eeecch---hHHHHH---HHhhccCcCEEEEcCCc-hhHHHHHHHhCCCceEEEeecccCcccCCCHHHHHHCCcEEEEE
Confidence            998753   222222   23457899999999997 589999999999999999997744 5789999999999999996


Q ss_pred             e
Q 020768          309 F  309 (321)
Q Consensus       309 ~  309 (321)
                      .
T Consensus       153 ~  153 (176)
T d1xa0a2         153 D  153 (176)
T ss_dssp             C
T ss_pred             e
Confidence            4

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.91  E-value=5.4e-27  Score=192.33  Aligned_cols=158  Identities=17%  Similarity=0.131  Sum_probs=127.9

Q ss_pred             hhhceeEEEccCC------CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCc-------CCCCCcccccce
Q 020768           15 EEVNMAAWLLGVN------TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF-------VVKEPMVIGHEC   81 (321)
Q Consensus        15 ~~~~~a~~~~~~~------~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~-------~~~~p~~~G~e~   81 (321)
                      |.||||+++.+.+      .++..++|.|+|+++||||||+++++|++|+++++|.+....       ....|.++|+|+
T Consensus         1 m~t~kA~v~~~~G~p~~~l~l~~~~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~   80 (175)
T d1gu7a1           1 MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEG   80 (175)
T ss_dssp             CEEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCC
T ss_pred             CceeEEEEEccCCCcccccEEEEEECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCccccccc
Confidence            5689999998543      245568888899999999999999999999999988653211       135788999999


Q ss_pred             eEEEEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhh
Q 020768           82 AGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEG  161 (321)
Q Consensus        82 vG~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~a  161 (321)
                      +|+|++.|.++..++.||+|....                           ...|+|+||+++++++++++|++++...+
T Consensus        81 ~g~V~~~~~~~~~~~~g~~v~~~~---------------------------~~~g~~aey~~v~~~~~~~iP~~~~~~~a  133 (175)
T d1gu7a1          81 LFEVIKVGSNVSSLEAGDWVIPSH---------------------------VNFGTWRTHALGNDDDFIKLPNPAQSKAN  133 (175)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEESS---------------------------SCCCCSBSEEEEEGGGEEEECCHHHHHHT
T ss_pred             ccccccccccccccccccceeccc---------------------------cccccccceeeehhhhccCCCccchhhhh
Confidence            999999999999999999998652                           24689999999999999999998876665


Q ss_pred             ccchhhHHHHHHHH--HcCCCCCCEEEEEc-C-ChhHHHHHHH
Q 020768          162 AMCEPLSVGLHACR--RANIGPETNVLIMG-A-GPIGLVTMLG  200 (321)
Q Consensus       162 a~~~~~~~a~~~l~--~~~~~~g~~vlI~G-a-g~vG~~a~ql  200 (321)
                      +...+ .++|+++.  ..++++|++|||.| + |++|++++|+
T Consensus       134 ~~~~~-~ta~~~l~~~~~~~~~g~~vli~gaa~~gvG~~~iQ~  175 (175)
T d1gu7a1         134 GKPNG-LTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY  175 (175)
T ss_dssp             TCSCC-CCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             ccchH-HHHHHHHHHHhcCCCCCCEEEEECccchhhhheEEeC
Confidence            55433 45666653  36799999999997 4 7799887763

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.91  E-value=2.2e-23  Score=170.25  Aligned_cols=151  Identities=25%  Similarity=0.350  Sum_probs=125.5

Q ss_pred             hhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCC
Q 020768          159 EEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTN  236 (321)
Q Consensus       159 ~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~  236 (321)
                      .+||++. .+.|+|+++ +.+++++||+|+|+|+|++|++++|+|+++|+++|++++.+++|+++++++|+++++++.+.
T Consensus         3 ~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~~~   82 (174)
T d1p0fa2           3 LESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDY   82 (174)
T ss_dssp             GGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGC
T ss_pred             HHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCCCc
Confidence            4566655 688999997 56899999999999999999999999999999899999999999999999999999987664


Q ss_pred             cccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHccc-CCEEEEEcCCCCCccccchh-hhccceEEEEeehhH
Q 020768          237 LQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRA-GGKVCLVGMGHLEMTVPLTP-AAARYLIYSFLFHFF  312 (321)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~-~G~~v~~g~~~~~~~~~~~~-~~~k~~~i~g~~~~~  312 (321)
                      +....+..+.   ..++++|++||++|+...++..+..+++ +|+++++|......++++.+ ++.++++|+|++..+
T Consensus        83 d~~~~~~~~~---~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~  157 (174)
T d1p0fa2          83 DKPIYEVICE---KTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGG  157 (174)
T ss_dssp             SSCHHHHHHH---HTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTCEEEECSGGG
T ss_pred             hhHHHHHHHH---hcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCccccccCHHHHhCCCEEEEEEeCC
Confidence            4333333332   3467999999999999999999998877 59999999877666676654 455789999998644

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.91  E-value=1.9e-24  Score=175.89  Aligned_cols=154  Identities=19%  Similarity=0.199  Sum_probs=130.5

Q ss_pred             Chhhhccch-hhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCC
Q 020768          157 SLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST  235 (321)
Q Consensus       157 ~~~~aa~~~-~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~  235 (321)
                      +.+.||.+. +..|+|+++++.++++|++|+|+|+|++|++++|+||++|+ +|++++.+++|+++++++|+++++++.+
T Consensus         2 p~e~AApl~cag~Ta~~al~~~~~~~g~~vlI~GaG~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~a~~lGa~~~i~~~~   80 (168)
T d1piwa2           2 PSHLAAPLLCGGLTVYSPLVRNGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGADHYIATLE   80 (168)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHHTTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEEGGG
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEECCCCcchhHHHHhhhccc-cccccccchhHHHHhhccCCcEEeeccc
Confidence            445666554 56789999999999999999999999999999999999999 6888999999999999999999998654


Q ss_pred             CcccHHHHHHHHHHHhCCCccEEEEcCCCHH--HHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehhHH
Q 020768          236 NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNK--TMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFL  313 (321)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~  313 (321)
                      . .++.+       ....++|+++||++...  .++.++++++++|+++++|....+.++++.++++|+++|.|++.++.
T Consensus        81 ~-~~~~~-------~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~Gs~~g~~  152 (168)
T d1piwa2          81 E-GDWGE-------KYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKPYGLKAVSISYSALGSI  152 (168)
T ss_dssp             T-SCHHH-------HSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCSSCCEEECGGGCBSCEEEECCCCCH
T ss_pred             h-HHHHH-------hhhcccceEEEEecCCccchHHHHHHHhhccceEEEeccccccccccHHHHHhCCcEEEEEeeCCH
Confidence            3 23221       23568999999988643  46789999999999999998888889999999999999999998887


Q ss_pred             Hhhccc
Q 020768          314 IVLGYS  319 (321)
Q Consensus       314 ~~~~~~  319 (321)
                      .++.++
T Consensus       153 ~~~~e~  158 (168)
T d1piwa2         153 KELNQL  158 (168)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            777654

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=1.1e-23  Score=166.87  Aligned_cols=124  Identities=19%  Similarity=0.156  Sum_probs=104.8

Q ss_pred             ceeEEEccC---CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768           18 NMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (321)
Q Consensus        18 ~~a~~~~~~---~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~   94 (321)
                      |||+++.+.   ..+++++++.|+|+++||+|||.|++||+.|+....|.+..  ...+|+++|+|++|+|+++|.  +.
T Consensus         1 MkA~v~~~~~~~~~l~i~~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~~~--~~~~p~v~G~e~~G~V~~~~~--~~   76 (146)
T d1o89a1           1 LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKI--IRNFPMIPGIDFAGTVRTSED--PR   76 (146)
T ss_dssp             CEEEEEECC---CEEEEEECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCSSC--CCSSSBCCCSEEEEEEEEECS--TT
T ss_pred             CeEEEEEcCCCceEEEEEEcCCCCCCCCEEEEEEeeccCccceeeEEEeeccc--ccccceeccccccccceeecc--CC
Confidence            899999854   34889999999999999999999999999999988886532  256799999999999999766  47


Q ss_pred             CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhh
Q 020768           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL  167 (321)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~  167 (321)
                      +++||+|......                      -+...+|+|+||+++|+++++++|+++++++||++++.
T Consensus        77 ~~~g~~v~~~~~~----------------------~g~~~~G~~Aey~~v~~~~vv~lP~~ls~~eAA~l~~a  127 (146)
T d1o89a1          77 FHAGQEVLLTGWG----------------------VGENHWGGLAEQARVKGDWLVAMPQGQAAKEISLSEAP  127 (146)
T ss_dssp             CCTTCEEEEECTT----------------------BTTTBCCSSBSEEEECGGGCEECCTTSCCEEECGGGHH
T ss_pred             ccceeeEEeeccc----------------------ceecCCCcceeeeeeeeeeEEECCCCCCHHHHHHHHHH
Confidence            9999999875211                      01245799999999999999999999999999988643

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.91  E-value=3.4e-26  Score=185.04  Aligned_cols=151  Identities=21%  Similarity=0.197  Sum_probs=120.4

Q ss_pred             hhceeEEEcc---CCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCC
Q 020768           16 EVNMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (321)
Q Consensus        16 ~~~~a~~~~~---~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v   92 (321)
                      .+|||+++.+   ...+++++++.|++++|||||||+|++||++|++.+.|..+.  ....|.++|+|++|+|++  +.+
T Consensus         2 ~~~ka~~~~~~g~~~~l~~~~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~~--~~~~~~~~g~e~~G~v~~--~~~   77 (162)
T d1tt7a1           2 TLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNI--VREYPLILGIDAAGTVVS--SND   77 (162)
T ss_dssp             CEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTT--CSSCSEECCSEEEEEEEE--CSS
T ss_pred             CcEEEEEEEecCCCeEEEEEEcCCCCCCCCEEEEEEEEecccchhhheeeecccc--cccceeeeeeeccccccc--ccc
Confidence            5689999984   356999999999999999999999999999999998886532  256789999999999998  567


Q ss_pred             CCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchh-hHHHH
Q 020768           93 KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEP-LSVGL  171 (321)
Q Consensus        93 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~-~~~a~  171 (321)
                      +++++||+|......                      -+...+|+|+||+.+|+++++++|+++++++||.++. ..++|
T Consensus        78 ~~~~~g~~v~~~~~~----------------------~g~~~~G~~aey~~v~~~~l~~iP~~ls~~~Aa~~~~~~~ta~  135 (162)
T d1tt7a1          78 PRFAEGDEVIATSYE----------------------LGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVDQLLTIVDR  135 (162)
T ss_dssp             TTCCTTCEEEEESTT----------------------BTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHSCSTTSEEE
T ss_pred             cccccceeeEeeecc----------------------ceeccccccceEEEecHHHEEECCCCCCHHHHHHHHHHHHHHH
Confidence            889999999875321                      0124679999999999999999999999999987764 44566


Q ss_pred             HHHHHcCCCCCCEEEEEcC-Ch
Q 020768          172 HACRRANIGPETNVLIMGA-GP  192 (321)
Q Consensus       172 ~~l~~~~~~~g~~vlI~Ga-g~  192 (321)
                      .++.......+++|||+|+ |+
T Consensus       136 ~~~~~~~~~~~~~Vli~ga~G~  157 (162)
T d1tt7a1         136 EVSLEETPGALKDILQNRIQGR  157 (162)
T ss_dssp             EECSTTHHHHHHHTTTTCCSSE
T ss_pred             HHHHhcCCCCCCEEEEECCcce
Confidence            5443333344567787776 54

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.90  E-value=3.3e-23  Score=169.59  Aligned_cols=155  Identities=25%  Similarity=0.305  Sum_probs=127.7

Q ss_pred             Chhhhccch-hhHHHHHHHH-HcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecC
Q 020768          157 SLEEGAMCE-PLSVGLHACR-RANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS  234 (321)
Q Consensus       157 ~~~~aa~~~-~~~~a~~~l~-~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~  234 (321)
                      ++++||++. .+.|+|+++. .+++++||+|||+|+|++|++++|+|+++|+++|++++++++|+++++++|+++++++.
T Consensus         2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~   81 (176)
T d2fzwa2           2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCC
Confidence            577888776 5779999984 68999999999999999999999999999998999999999999999999999999886


Q ss_pred             CCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC--CccccchhhhccceEEEEeehhH
Q 020768          235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL--EMTVPLTPAAARYLIYSFLFHFF  312 (321)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~k~~~i~g~~~~~  312 (321)
                      +...+..+.+++   ..+.++|++||++|++..++.+..+++++|+++.++....  ....+....+.++++|+|++.++
T Consensus        82 ~~~~~~~~~~~~---~~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~  158 (176)
T d2fzwa2          82 DFSKPIQEVLIE---MTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGG  158 (176)
T ss_dssp             GCSSCHHHHHHH---HTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGG
T ss_pred             chhhHHHHHHHH---HcCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEeeccccccccccHHHHHCCCEEEEEeeeC
Confidence            655555444443   3467899999999999999999999999988888764433  23444444566899999998765


Q ss_pred             HH
Q 020768          313 LI  314 (321)
Q Consensus       313 ~~  314 (321)
                      ++
T Consensus       159 ~~  160 (176)
T d2fzwa2         159 WK  160 (176)
T ss_dssp             CC
T ss_pred             Cc
Confidence            43

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.90  E-value=2.6e-23  Score=168.86  Aligned_cols=156  Identities=28%  Similarity=0.292  Sum_probs=135.8

Q ss_pred             CChhhhccch-hhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecC
Q 020768          156 VSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS  234 (321)
Q Consensus       156 ~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~  234 (321)
                      +|+++||.++ +..|+|++++..++++|++|||+|+|++|++++|+++..|+ +|++++++++|+++++++|++.++++.
T Consensus         1 ls~eeAA~l~~~~~Ta~~al~~~~~~~g~~vlv~G~G~iG~~a~~~a~~~g~-~v~~~~~~~~r~~~~k~~Ga~~~~~~~   79 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNPL   79 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHHTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEeecccchhhhhHHHhcCCC-eEeccCCCHHHhhhhhhcCcceecccc
Confidence            5789998776 56789999999999999999999999999999999999999 799999999999999999999998865


Q ss_pred             CCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehhHHH
Q 020768          235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFLI  314 (321)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~  314 (321)
                      +  .++.+.+++..    .+.|.++++++++..++.++++++++|+++.+|....+.+++..+++.|++++.|++.++.+
T Consensus        80 ~--~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~gs~~~~~~  153 (168)
T d1rjwa2          80 K--EDAAKFMKEKV----GGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRK  153 (168)
T ss_dssp             T--SCHHHHHHHHH----SSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHH
T ss_pred             c--chhhhhccccc----CCCceEEeecCCHHHHHHHHHHhccCCceEecccccCCCCCCHHHHHHCCcEEEEEeeCCHH
Confidence            4  46666665542    45666667778889999999999999999999988888899999999999999999988777


Q ss_pred             hhcc
Q 020768          315 VLGY  318 (321)
Q Consensus       315 ~~~~  318 (321)
                      ++..
T Consensus       154 ~~~~  157 (168)
T d1rjwa2         154 DLQE  157 (168)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6654

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=1.6e-23  Score=170.31  Aligned_cols=154  Identities=18%  Similarity=0.140  Sum_probs=124.8

Q ss_pred             CChhhhccch-hhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecC
Q 020768          156 VSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS  234 (321)
Q Consensus       156 ~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~  234 (321)
                      .+++++|.+. ...|+|++++++++++|++|+|+|+|++|++++|+||++|+ .+++++.+++|+++++++|++.++++.
T Consensus         4 ~~~a~~Apl~Cag~Tay~al~~~~~~~G~~VlI~GaG~vG~~a~qlak~~Ga-~~i~~~~~~~~~~~a~~lGad~~i~~~   82 (168)
T d1uufa2           4 EQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEVVNSR   82 (168)
T ss_dssp             GGHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEETT
T ss_pred             ccHHHHHHHHhHHHHHHHHHHHhCCCCCCEEEEeccchHHHHHHHHhhcccc-cchhhccchhHHHHHhccCCcEEEECc
Confidence            3455666444 45678999999999999999999999999999999999999 566788999999999999999999865


Q ss_pred             CCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-CccccchhhhccceEEEEeehhHH
Q 020768          235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARYLIYSFLFHFFL  313 (321)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~~~  313 (321)
                      +.  +.       .....+++|++||++|++..++.++++++++|+++++|.... ...++...+++|+++|.|++.++.
T Consensus        83 ~~--~~-------~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~l~~k~~~i~Gs~~~~~  153 (168)
T d1uufa2          83 NA--DE-------MAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGI  153 (168)
T ss_dssp             CH--HH-------HHTTTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCCH
T ss_pred             hh--hH-------HHHhcCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCCCCcccccHHHHHHCCcEEEEEeecCH
Confidence            42  11       112357899999999998889999999999999999997655 356788889999999999998877


Q ss_pred             Hhhccc
Q 020768          314 IVLGYS  319 (321)
Q Consensus       314 ~~~~~~  319 (321)
                      ..+..+
T Consensus       154 ~d~~e~  159 (168)
T d1uufa2         154 PETQEM  159 (168)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            766544

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.89  E-value=3.7e-23  Score=171.35  Aligned_cols=156  Identities=16%  Similarity=0.212  Sum_probs=127.6

Q ss_pred             CChhhhccch-hhHHHHHHHHH-cCCCCCCEEEEE-cC-ChhHHHHHHHHHHcCCCeEEEEeCC----hhHHHHHHHcCC
Q 020768          156 VSLEEGAMCE-PLSVGLHACRR-ANIGPETNVLIM-GA-GPIGLVTMLGARAFGAPRIVIVDVD----DYRLSVAKELGA  227 (321)
Q Consensus       156 ~~~~~aa~~~-~~~~a~~~l~~-~~~~~g~~vlI~-Ga-g~vG~~a~qla~~~g~~~vv~v~~~----~~~~~~~~~~g~  227 (321)
                      +++++||+++ .+.|||+++.. .++++|++++|+ |+ |++|++++|+||++|++ +|++.++    +++.++++++|+
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~-vI~~v~~~~~~~~~~~~~~~lGa   79 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFN-SISVIRDRPNLDEVVASLKELGA   79 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCE-EEEEECCCTTHHHHHHHHHHHTC
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCCe-EEEEEecccccchHHhhhhhccc
Confidence            5789999776 78899999965 899999999997 66 99999999999999995 5555433    345667889999


Q ss_pred             CeEEecCC-CcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCC-CCccccchhhhccceEE
Q 020768          228 DNIVKVST-NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-LEMTVPLTPAAARYLIY  305 (321)
Q Consensus       228 ~~vi~~~~-~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~k~~~i  305 (321)
                      ++++++++ +..++.+.++++....+.++|++||++|+ ..+...+++|+++|+++.+|... .+.+++...+++|++++
T Consensus        80 d~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~l~~k~~~i  158 (189)
T d1gu7a2          80 TQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGG-KSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTS  158 (189)
T ss_dssp             SEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCH-HHHHHHHHTSCTTCEEEECCCCSSCCEEECHHHHHHSCCEE
T ss_pred             cEEEeccccchhHHHHHHHHHHhhccCCceEEEECCCc-chhhhhhhhhcCCcEEEEECCccCCCccCcHHHHHHCCcEE
Confidence            99998753 23456666777666668899999999996 67899999999999999999654 46789999999999999


Q ss_pred             EEeehhHH
Q 020768          306 SFLFHFFL  313 (321)
Q Consensus       306 ~g~~~~~~  313 (321)
                      +|++...+
T Consensus       159 ~G~~~~~~  166 (189)
T d1gu7a2         159 AGFWVTEL  166 (189)
T ss_dssp             EECCHHHH
T ss_pred             EEEEehHh
Confidence            99877543

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.89  E-value=1.2e-22  Score=166.10  Aligned_cols=154  Identities=20%  Similarity=0.315  Sum_probs=126.5

Q ss_pred             CChhhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEec
Q 020768          156 VSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV  233 (321)
Q Consensus       156 ~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~  233 (321)
                      .++++||.+. .+.|+|+++ +.+++++|++|+|+|+|++|++++|+++++|+.+|++++.+++|+++++++|+++++++
T Consensus         2 ~P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~   81 (176)
T d1d1ta2           2 APPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISP   81 (176)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECG
T ss_pred             cCHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECc
Confidence            3578888776 678999997 56899999999999999999999999999998899999999999999999999999987


Q ss_pred             CCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccC-CEEEEEcCCCCCccccchh-hhccceEEEEeehh
Q 020768          234 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHLEMTVPLTP-AAARYLIYSFLFHF  311 (321)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~-~~~k~~~i~g~~~~  311 (321)
                      .+.+ +..+.+.+.  +.+.|+|++||++|....++..+..+.++ |+++++|.+....++++.+ ++.++.+++|++..
T Consensus        82 ~~~~-~~~~~~~~~--~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G  158 (176)
T d1d1ta2          82 KDST-KPISEVLSE--MTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFG  158 (176)
T ss_dssp             GGCS-SCHHHHHHH--HHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGG
T ss_pred             cccc-hHHHHHHHH--hccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccccCCCHHHHhCCCEEEEEEEe
Confidence            6433 333334333  34789999999999988888888877665 9999999876655544432 45578999999865


Q ss_pred             H
Q 020768          312 F  312 (321)
Q Consensus       312 ~  312 (321)
                      .
T Consensus       159 ~  159 (176)
T d1d1ta2         159 G  159 (176)
T ss_dssp             G
T ss_pred             C
Confidence            4

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.89  E-value=5.7e-23  Score=169.20  Aligned_cols=145  Identities=21%  Similarity=0.206  Sum_probs=121.6

Q ss_pred             ccchhhHHHHHHHH-HcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCccc
Q 020768          162 AMCEPLSVGLHACR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQD  239 (321)
Q Consensus       162 a~~~~~~~a~~~l~-~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~  239 (321)
                      ++-.+..|||+++. .+++++||+|||+|+ |++|++++|+||..|+ +|++++++++|.++++++|+++++++++  ++
T Consensus         9 ~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~Ga~~vi~~~~--~~   85 (182)
T d1v3va2           9 TIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGFDAAFNYKT--VN   85 (182)
T ss_dssp             TTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTS--CS
T ss_pred             HHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCC-EEEEeCCCHHHHHHHHhhhhhhhccccc--cc
Confidence            44457789999995 589999999999998 9999999999999999 7999999999999999999999998654  45


Q ss_pred             HHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-------CccccchhhhccceEEEEeehhH
Q 020768          240 IAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-------EMTVPLTPAAARYLIYSFLFHFF  312 (321)
Q Consensus       240 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-------~~~~~~~~~~~k~~~i~g~~~~~  312 (321)
                      +.+.+.+.  +.+.++|+|||++|+ ++++.++++++++|+++.+|....       +..++...+++|+++++|++.+.
T Consensus        86 ~~~~~~~~--~~~~Gvd~v~D~vG~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~~  162 (182)
T d1v3va2          86 SLEEALKK--ASPDGYDCYFDNVGG-EFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYR  162 (182)
T ss_dssp             CHHHHHHH--HCTTCEEEEEESSCH-HHHHHHGGGEEEEEEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGGG
T ss_pred             HHHHHHHH--hhcCCCceeEEecCc-hhhhhhhhhccCCCeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEec
Confidence            55555443  347889999999995 799999999999999999995321       23466677999999999997754

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.88  E-value=1.6e-21  Score=159.58  Aligned_cols=153  Identities=24%  Similarity=0.284  Sum_probs=123.4

Q ss_pred             Chhhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecC
Q 020768          157 SLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS  234 (321)
Q Consensus       157 ~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~  234 (321)
                      ++++||.++ .+.|+|+++ +.+++++||+|+|+|+|++|++++|+++.+|..+|++++++++|.++++++|+++++++.
T Consensus         2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~   81 (176)
T d2jhfa2           2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecC
Confidence            577888776 578999998 568999999999999999999999999999998999999999999999999999999875


Q ss_pred             CCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEc-CCCCCc-cccchhhhccceEEEEeehhH
Q 020768          235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG-MGHLEM-TVPLTPAAARYLIYSFLFHFF  312 (321)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g-~~~~~~-~~~~~~~~~k~~~i~g~~~~~  312 (321)
                      +.+....+..+.   +.++++|++||++|.+..++.++..++++|+.+.++ ...... ..+...++.|+++++|++..+
T Consensus        82 ~~~~~~~~~~~~---~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~  158 (176)
T d2jhfa2          82 DYKKPIQEVLTE---MSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGG  158 (176)
T ss_dssp             GCSSCHHHHHHH---HTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGG
T ss_pred             CchhHHHHHHHH---HhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCCcccccccHHHHhCCCEEEEEEEeC
Confidence            544343333333   346799999999999999999999999986555555 444433 333345677999999998654

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.88  E-value=2.9e-22  Score=164.93  Aligned_cols=148  Identities=21%  Similarity=0.285  Sum_probs=121.6

Q ss_pred             hhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCC
Q 020768          159 EEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST  235 (321)
Q Consensus       159 ~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~  235 (321)
                      +|||+++ ++.|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ .++++.+++++.++++++|+++++++++
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~-~vi~~~~~~~~~~~l~~~Ga~~vi~~~~   79 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSRLGVEYVGDSRS   79 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHTTCCSEEEETTC
T ss_pred             CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccc-cceeeecccccccccccccccccccCCc
Confidence            3566554 888999998 4578999999999987 9999999999999999 6788888899999999999999998654


Q ss_pred             CcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC-ccccchhhhccceEEEEeehhH
Q 020768          236 NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE-MTVPLTPAAARYLIYSFLFHFF  312 (321)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~k~~~i~g~~~~~  312 (321)
                        +++.+.++++.  .+.++|++||++|+ ++++.++++|+++|+++.+|..... ........+.|++++.++....
T Consensus        80 --~~~~~~v~~~t--~~~g~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (183)
T d1pqwa_          80 --VDFADEILELT--DGYGVDVVLNSLAG-EAIQRGVQILAPGGRFIELGKKDVYADASLGLAALAKSASFSVVDLDL  152 (183)
T ss_dssp             --STHHHHHHHHT--TTCCEEEEEECCCT-HHHHHHHHTEEEEEEEEECSCGGGTTTCEEEGGGGTTTCEEEECCHHH
T ss_pred             --cCHHHHHHHHh--CCCCEEEEEecccc-hHHHHHHHHhcCCCEEEEEccCCCCCCcccchHHHhCCcEEEEEEccc
Confidence              57878777653  47889999999997 6899999999999999999966543 2222233456999999986544

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.87  E-value=1.4e-21  Score=162.24  Aligned_cols=144  Identities=24%  Similarity=0.425  Sum_probs=123.2

Q ss_pred             hhccchhhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCccc
Q 020768          160 EGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQD  239 (321)
Q Consensus       160 ~aa~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~  239 (321)
                      .+++..+++|+|++++++++++|++|||+|+|++|++++|+|+++|+.+|++++.+++|+++++++|+++++++.+  .+
T Consensus         4 ~~~l~d~~~ta~~a~~~a~v~~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~--~~   81 (195)
T d1kola2           4 LTCLSDILPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLD--TP   81 (195)
T ss_dssp             HGGGGTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSS--SC
T ss_pred             HHhcccHHHHHHHHHHHhCCCCCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeCCC--cC
Confidence            3456679999999999999999999999999999999999999999999999999999999999999999887543  57


Q ss_pred             HHHHHHHHHHHhCCCccEEEEcCCC---------------HHHHHHHHHHcccCCEEEEEcCCCCC-------------c
Q 020768          240 IAEEVEKIQKAMGTGIDVSFDCAGF---------------NKTMSTALSATRAGGKVCLVGMGHLE-------------M  291 (321)
Q Consensus       240 ~~~~~~~~~~~~~~~~d~vid~~g~---------------~~~~~~~~~~l~~~G~~v~~g~~~~~-------------~  291 (321)
                      +.+.+.++  +.+.++|++||++|.               +.+++.++++++++|+++++|...++             .
T Consensus        82 ~~~~i~~~--t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~~~~~~~~~~~~~~~~~  159 (195)
T d1kola2          82 LHEQIAAL--LGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSL  159 (195)
T ss_dssp             HHHHHHHH--HSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHHHTTCC
T ss_pred             HHHHHHHH--hCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecCCCcccchhhhhhcCce
Confidence            77777776  347899999999994               36899999999999999999975432             2


Q ss_pred             cccchhhhccceEEEE
Q 020768          292 TVPLTPAAARYLIYSF  307 (321)
Q Consensus       292 ~~~~~~~~~k~~~i~g  307 (321)
                      .+++..++.|+++|.+
T Consensus       160 ~~~~~~~~~k~~~i~~  175 (195)
T d1kola2         160 SIRFGLGWAKSHSFHT  175 (195)
T ss_dssp             CCCHHHHHHTTCEEEE
T ss_pred             eeeHHHHHhhcceecc
Confidence            3455557789999875

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.87  E-value=2.7e-21  Score=157.95  Aligned_cols=153  Identities=24%  Similarity=0.334  Sum_probs=126.1

Q ss_pred             Chhhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecC
Q 020768          157 SLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS  234 (321)
Q Consensus       157 ~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~  234 (321)
                      ++++||.+. .+.|+|+++ +.+++++||+|+|+|+|++|+++++++++.|..+|++++++++|+++++++|+++++++.
T Consensus         2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~   81 (175)
T d1cdoa2           2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPN   81 (175)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGG
T ss_pred             CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEecCCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCC
Confidence            578888776 678999998 568999999999999999999999999999998999999999999999999999999876


Q ss_pred             CCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCE-EEEEcCCCCCccccchhhhccceEEEEeehhH
Q 020768          235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGK-VCLVGMGHLEMTVPLTPAAARYLIYSFLFHFF  312 (321)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~-~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~  312 (321)
                      +.+ +..+...+.  +.++++|++||++|+...+..++.+++++|. ++..|.......++...++.++++|+|++...
T Consensus        82 ~~~-~~~~~~~~~--~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~i~Gs~~G~  157 (175)
T d1cdoa2          82 DHS-EPISQVLSK--MTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFGG  157 (175)
T ss_dssp             GCS-SCHHHHHHH--HHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTCEEEECSGGG
T ss_pred             Ccc-hhHHHHHHh--hccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecCCcccCccHHHHHCCcEEEEEEEeC
Confidence            543 233333333  3478999999999998888999999887754 45556665566677777788999999998655

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=6.3e-22  Score=162.35  Aligned_cols=140  Identities=22%  Similarity=0.282  Sum_probs=119.3

Q ss_pred             CChhhhccch-hhHHHHHHHHH-cCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEe
Q 020768          156 VSLEEGAMCE-PLSVGLHACRR-ANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVK  232 (321)
Q Consensus       156 ~~~~~aa~~~-~~~~a~~~l~~-~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~  232 (321)
                      +|+++||.++ +..|||+++.+ +++++||+|||+|+ |++|++++|+|+..|+ +|++++++++|.++++++|++++++
T Consensus         1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga-~Vi~~~~s~~k~~~~~~lGa~~vi~   79 (179)
T d1qora2           1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVIN   79 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCC-eEeecccchHHHHHHHhcCCeEEEE
Confidence            5789998765 67799999965 78999999999987 8899999999999999 7999999999999999999999998


Q ss_pred             cCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-Cccccchhhhcc
Q 020768          233 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAAR  301 (321)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k  301 (321)
                      +++  +++.+.++++  +++.++|+++|++|+ ++++.++.+++++|+++.+|.... ..+++...+..+
T Consensus        80 ~~~--~d~~~~v~~~--t~g~g~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~  144 (179)
T d1qora2          80 YRE--EDLVERLKEI--TGGKKVRVVYDSVGR-DTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQK  144 (179)
T ss_dssp             TTT--SCHHHHHHHH--TTTCCEEEEEECSCG-GGHHHHHHTEEEEEEEEECCCTTCCCCCBCTHHHHHT
T ss_pred             CCC--CCHHHHHHHH--hCCCCeEEEEeCccH-HHHHHHHHHHhcCCeeeecccccCCccccchhhhhcc
Confidence            654  6888888776  347889999999986 689999999999999999996544 456666555444

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.84  E-value=1.4e-20  Score=155.29  Aligned_cols=149  Identities=21%  Similarity=0.251  Sum_probs=115.0

Q ss_pred             CChhhhccchhhHHHHHHHH-HcCCCCC--CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHH-HHHHcCCCeE
Q 020768          156 VSLEEGAMCEPLSVGLHACR-RANIGPE--TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADNI  230 (321)
Q Consensus       156 ~~~~~aa~~~~~~~a~~~l~-~~~~~~g--~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~-~~~~~g~~~v  230 (321)
                      +|+.+.|+-.+..|||+++. .+++++|  ++|||+|+ |++|++++|+||.+|+++|+++++++++.. +++++|++.+
T Consensus         2 ~~~~~galg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~v   81 (187)
T d1vj1a2           2 LSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAA   81 (187)
T ss_dssp             GGGGGTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEE
T ss_pred             ccHHHHHhhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEE
Confidence            46667665557889999984 5788887  88999987 999999999999999988887777766555 5568999999


Q ss_pred             EecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC---cc-------ccchhhhc
Q 020768          231 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE---MT-------VPLTPAAA  300 (321)
Q Consensus       231 i~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~-------~~~~~~~~  300 (321)
                      +++.+  +++.+.+++.   .+.|+|+|||++|+ +.++..+++++++|+++.+|...+.   .+       .....+..
T Consensus        82 i~~~~--~~~~~~~~~~---~~~GvDvv~D~vGg-~~~~~~~~~l~~~G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~  155 (187)
T d1vj1a2          82 VNYKT--GNVAEQLREA---CPGGVDVYFDNVGG-DISNTVISQMNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKE  155 (187)
T ss_dssp             EETTS--SCHHHHHHHH---CTTCEEEEEESSCH-HHHHHHHTTEEEEEEEEEC------------CCCCCHHHHHHHHH
T ss_pred             eeccc--hhHHHHHHHH---hccCceEEEecCCc-hhHHHHhhhccccccEEEeccccccccccccCCchHHHHHHHHHh
Confidence            99764  5667666665   36789999999996 6899999999999999999964321   11       11233678


Q ss_pred             cceEEEEeeh
Q 020768          301 RYLIYSFLFH  310 (321)
Q Consensus       301 k~~~i~g~~~  310 (321)
                      |+++++|+..
T Consensus       156 k~i~~~g~~~  165 (187)
T d1vj1a2         156 RNITRERFTV  165 (187)
T ss_dssp             TTCEEEECCG
T ss_pred             cceEEEEeEe
Confidence            9999999765

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.83  E-value=2.8e-21  Score=156.15  Aligned_cols=133  Identities=19%  Similarity=0.203  Sum_probs=109.5

Q ss_pred             HHHHHHH-cCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHH
Q 020768          170 GLHACRR-ANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKI  247 (321)
Q Consensus       170 a~~~l~~-~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~  247 (321)
                      +++++.. ...+++++|||+|+ |++|++++|+||++|+ +|+++.++++|.++++++|++.++++++..   .+.   .
T Consensus        11 a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~~~~lGad~vi~~~~~~---~~~---~   83 (167)
T d1tt7a2          11 SVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGASEVISREDVY---DGT---L   83 (167)
T ss_dssp             HHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTCSEEEEHHHHC---SSC---C
T ss_pred             HHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCC-ceEEEecCHHHHHHHHhhcccceEeccchh---chh---h
Confidence            3455544 45667889999998 9999999999999999 688999999999999999999998754211   111   1


Q ss_pred             HHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-CccccchhhhccceEEEEeeh
Q 020768          248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARYLIYSFLFH  310 (321)
Q Consensus       248 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~  310 (321)
                      ....+.++|+|||++|+ .+++.++++|+++|+++.+|...+ ..++++.+++.|+++++|+.+
T Consensus        84 ~~~~~~gvd~vid~vgg-~~~~~~~~~l~~~G~iv~~G~~~g~~~~~~~~~l~~k~~~i~G~~~  146 (167)
T d1tt7a2          84 KALSKQQWQGAVDPVGG-KQLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDS  146 (167)
T ss_dssp             CSSCCCCEEEEEESCCT-HHHHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCS
T ss_pred             hcccCCCceEEEecCcH-HHHHHHHHHhccCceEEEeeccCCCcccCCHHHHHHCCcEEEEEec
Confidence            12346789999999997 689999999999999999997755 678999999999999999754

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=5.4e-21  Score=155.95  Aligned_cols=144  Identities=15%  Similarity=0.184  Sum_probs=117.4

Q ss_pred             CChhhhccch-hhHHHHHHH---HHcCC-CCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCe
Q 020768          156 VSLEEGAMCE-PLSVGLHAC---RRANI-GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN  229 (321)
Q Consensus       156 ~~~~~aa~~~-~~~~a~~~l---~~~~~-~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~  229 (321)
                      +++.+||.++ +..|||+++   +.... ..+++|||+|+ |++|++++|+||++|+ +||++.++++|.++++++|+++
T Consensus         1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga-~Via~~~~~~k~~~~~~lGad~   79 (177)
T d1o89a2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGASR   79 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTEEE
T ss_pred             CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCC-CeEEEecchhHHHHHHhhcccc
Confidence            4678888776 566888665   34444 45569999988 9999999999999999 5888889999999999999999


Q ss_pred             EEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-CccccchhhhccceEEEEe
Q 020768          230 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARYLIYSFL  308 (321)
Q Consensus       230 vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~  308 (321)
                      ++++++.+  +.+.      ......|.++|++|+ ..+...+++++++|+++.+|...+ ..++|..+++.|+++++|+
T Consensus        80 vi~~~~~~--~~~~------l~~~~~~~vvD~Vgg-~~~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~k~~~i~G~  150 (177)
T d1o89a2          80 VLPRDEFA--ESRP------LEKQVWAGAIDTVGD-KVLAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGV  150 (177)
T ss_dssp             EEEGGGSS--SCCS------SCCCCEEEEEESSCH-HHHHHHHHTEEEEEEEEECCCTTCSCCCCCSHHHHHHCCEEEEC
T ss_pred             ccccccHH--HHHH------HHhhcCCeeEEEcch-HHHHHHHHHhccccceEeecccCCccccccHHHHHHCCCeEEEE
Confidence            99976432  2211      124567999999996 689999999999999999997654 5788999999999999996


Q ss_pred             e
Q 020768          309 F  309 (321)
Q Consensus       309 ~  309 (321)
                      .
T Consensus       151 ~  151 (177)
T d1o89a2         151 D  151 (177)
T ss_dssp             C
T ss_pred             e
Confidence            4

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.59  E-value=1.9e-14  Score=112.66  Aligned_cols=131  Identities=13%  Similarity=0.017  Sum_probs=94.5

Q ss_pred             hhceeEEEcc-------CCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEe
Q 020768           16 EVNMAAWLLG-------VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV   88 (321)
Q Consensus        16 ~~~~a~~~~~-------~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~v   88 (321)
                      .+.|+.++..       +..|+++|.+.|+|++||||||+++.++++.......     +  ....-+...+++|+|++ 
T Consensus         2 ~~~k~~vl~~~P~G~P~~~~f~l~e~~ip~~~~gevLvk~~~~svDp~~R~~~~-----~--~~~g~~~~g~~vg~Vv~-   73 (147)
T d1v3va1           2 VKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIASK-----R--LKEGAVMMGQQVARVVE-   73 (147)
T ss_dssp             CEEEEEEESSCCCSSCCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHGG-----G--SCTTSBCCCCEEEEEEE-
T ss_pred             cccEEEEEccCCCCCCcccceEEEEEECCCCCCCEEEEEEEEEeEccccccccc-----c--cccCCccccceEEEEEE-
Confidence            4567777762       1349999999999999999999999999875332111     1  23334566689999998 


Q ss_pred             CCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhh-----hcc
Q 020768           89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEE-----GAM  163 (321)
Q Consensus        89 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~-----aa~  163 (321)
                       ++.++|++||+|...                               ++|+||.+++...+.++|+..+...     .+.
T Consensus        74 -S~~~~f~~GD~V~g~-------------------------------~gw~ey~v~~~~~l~kv~~~~~~~~~~~~~~~~  121 (147)
T d1v3va1          74 -SKNSAFPAGSIVLAQ-------------------------------SGWTTHFISDGKGLEKLLTEWPDKKIQYHEHVT  121 (147)
T ss_dssp             -ESCTTSCTTCEEEEC-------------------------------CCSBSEEEECSSSCEECCTTCCTTSSCCCEEEE
T ss_pred             -eCCCcccCCCEEEEc-------------------------------cCCEeEEEeccceeeEccccccccccchhhhHh
Confidence             677889999999754                               7899999999999999987754332     222


Q ss_pred             c-hhhHH-HHHHHHHcCCCCCCEEEE
Q 020768          164 C-EPLSV-GLHACRRANIGPETNVLI  187 (321)
Q Consensus       164 ~-~~~~~-a~~~l~~~~~~~g~~vlI  187 (321)
                      + ....+ ||..+ ...-+.|++|++
T Consensus       122 lG~~Gmtaay~gl-~~~~k~Getvv~  146 (147)
T d1v3va1         122 KGFENMPAAFIEM-LNGANLGKAVVT  146 (147)
T ss_dssp             ECGGGHHHHHHHH-HTTCCSSEEEEE
T ss_pred             ccccchHHHHHHh-hCCCCCCCEEEe
Confidence            2 23444 45455 333467999986

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.35  E-value=8.1e-13  Score=90.93  Aligned_cols=71  Identities=15%  Similarity=0.215  Sum_probs=60.7

Q ss_pred             CChhhhccch-hhHHHHHHH----HHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCC
Q 020768          156 VSLEEGAMCE-PLSVGLHAC----RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA  227 (321)
Q Consensus       156 ~~~~~aa~~~-~~~~a~~~l----~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~  227 (321)
                      +++++|+.++ +..|||.++    +....+++++|||+|+ |++|.+++|++|.+|+ +|+++++++++.++++++|+
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~-~Vi~~t~s~~k~~~~~~lGA   77 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGA   77 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHHCCC
Confidence            4778888776 566787765    2356789999999988 9999999999999999 68989999999999999985

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=98.00  E-value=3.6e-05  Score=64.31  Aligned_cols=105  Identities=22%  Similarity=0.235  Sum_probs=75.6

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecC-CCcccHHHHHHHHHHHhCCCccEE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~-~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      .|+++||+|+ +++|...++.+...|+ +|+.+++++++.+.+++.+...+ ..+ .+..+..+.+.+..+. .+++|++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~-~G~iDiL   80 (248)
T d2d1ya1           4 AGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGGAFF-QVDLEDERERVRFVEEAAYA-LGRVDVL   80 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTCEEE-ECCTTCHHHHHHHHHHHHHH-HSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeEE-EEeCCCHHHHHHHHHHHHHh-cCCCCeE
Confidence            6899999998 9999999999999999 68889999999888888886543 222 2223334444444333 3579999


Q ss_pred             EEcCCCH-------------------------HHHHHHHHHccc--CCEEEEEcCCC
Q 020768          259 FDCAGFN-------------------------KTMSTALSATRA--GGKVCLVGMGH  288 (321)
Q Consensus       259 id~~g~~-------------------------~~~~~~~~~l~~--~G~~v~~g~~~  288 (321)
                      |+++|..                         ...+.++..|..  +|+++.+++..
T Consensus        81 VnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~  137 (248)
T d2d1ya1          81 VNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQ  137 (248)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGG
T ss_pred             EEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccc
Confidence            9998853                         134556666644  58999998654

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=97.95  E-value=1.3e-05  Score=62.21  Aligned_cols=99  Identities=21%  Similarity=0.278  Sum_probs=72.4

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      +.-+|+|+|+|.+|+.|++.|+.+|+ .|.+.|.+.++++.++......+........    .+.+..    ...|+||.
T Consensus        31 ~pa~V~ViGaGvaG~~A~~~A~~lGA-~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~----~l~~~~----~~aDivI~  101 (168)
T d1pjca1          31 KPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNSA----EIETAV----AEADLLIG  101 (168)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCHH----HHHHHH----HTCSEEEE
T ss_pred             CCcEEEEECCChHHHHHHHHHhhCCC-EEEEEeCcHHHHHHHHHhhcccceeehhhhh----hHHHhh----ccCcEEEE
Confidence            45789999999999999999999999 7999999999999888754332222112222    232222    24799999


Q ss_pred             cCCCHH------HHHHHHHHcccCCEEEEEcCCC
Q 020768          261 CAGFNK------TMSTALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       261 ~~g~~~------~~~~~~~~l~~~G~~v~~g~~~  288 (321)
                      ++--+.      .-+..++.+++|+.++.+..-.
T Consensus       102 aalipG~~aP~lIt~~mv~~Mk~GSVIVDvaidq  135 (168)
T d1pjca1         102 AVLVPGRRAPILVPASLVEQMRTGSVIVDVAVDQ  135 (168)
T ss_dssp             CCCCTTSSCCCCBCHHHHTTSCTTCEEEETTCTT
T ss_pred             eeecCCcccCeeecHHHHhhcCCCcEEEEeecCC
Confidence            865431      2457889999999999998543

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=97.91  E-value=3.3e-05  Score=60.74  Aligned_cols=123  Identities=18%  Similarity=0.186  Sum_probs=82.3

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCc------------------ccHHH
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL------------------QDIAE  242 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~------------------~~~~~  242 (321)
                      +.-+|+|+|+|.+|+.|+..|+.+|+ .|.+.|.+.++++.+++++...+-......                  ....+
T Consensus        28 ~pa~VvViGaGvaG~~Aa~~A~~lGA-~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          28 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCcEEEEEcCcHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            35689999999999999999999999 799999999999999999875432110000                  01111


Q ss_pred             HHHHHHHHhCCCccEEEEcCCCHH------HHHHHHHHcccCCEEEEEcCC-CCCccccc--hhhhccceEEEEe
Q 020768          243 EVEKIQKAMGTGIDVSFDCAGFNK------TMSTALSATRAGGKVCLVGMG-HLEMTVPL--TPAAARYLIYSFL  308 (321)
Q Consensus       243 ~~~~~~~~~~~~~d~vid~~g~~~------~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~--~~~~~k~~~i~g~  308 (321)
                      .+.+.    -...|+||-++--+.      .-+..++.+++|+.++.++.- ++-.+..-  -.+...++++.|.
T Consensus       107 ~l~~~----l~~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvaidqGGn~Ets~~~~~~~~~gV~~~gv  177 (183)
T d1l7da1         107 AVLKE----LVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGH  177 (183)
T ss_dssp             HHHHH----HTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSSTTCCTTCEEEETTEEEECC
T ss_pred             HHHHH----HHhhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEeecCCCccccCcCCCEEEECCEEEEee
Confidence            22221    246899998764331      245788999999999999854 33222211  1145567776664

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.83  E-value=2.3e-05  Score=64.00  Aligned_cols=104  Identities=22%  Similarity=0.291  Sum_probs=73.7

Q ss_pred             HHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHH
Q 020768          172 HACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEK  246 (321)
Q Consensus       172 ~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~  246 (321)
                      +.++.+++++|++||-+|+|. |..++.+|+..|. ..|++++.+++..+.+++    .+.+.+.....+..+   .   
T Consensus        66 ~~l~~l~l~~g~~VLdiG~Gt-G~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~---~---  138 (213)
T d1dl5a1          66 LFMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYY---G---  138 (213)
T ss_dssp             HHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG---C---
T ss_pred             HHHHhhhccccceEEEecCcc-chhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHH---c---
Confidence            346788999999999999876 8888889998763 269999999887777653    455443322211111   0   


Q ss_pred             HHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEE
Q 020768          247 IQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV  284 (321)
Q Consensus       247 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  284 (321)
                      +  .....||+|+.+.+-....+.+++.|++||+++..
T Consensus       139 ~--~~~~~fD~I~~~~~~~~~p~~l~~~LkpGG~lv~p  174 (213)
T d1dl5a1         139 V--PEFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  174 (213)
T ss_dssp             C--GGGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEE
T ss_pred             c--ccccchhhhhhhccHHHhHHHHHHhcCCCcEEEEE
Confidence            0  11356999998776555557889999999999874

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.82  E-value=1.7e-05  Score=64.85  Aligned_cols=104  Identities=19%  Similarity=0.223  Sum_probs=75.2

Q ss_pred             HHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCeEEecCCCcccHHHHHHH
Q 020768          171 LHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNIVKVSTNLQDIAEEVEK  246 (321)
Q Consensus       171 ~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~vi~~~~~~~~~~~~~~~  246 (321)
                      ...++.+++++|++||.+|+|. |+.++.+++..|. .|++++.+++-.+.+    +++|.+.+.....+..+   -   
T Consensus        68 a~ml~~L~l~~g~~VLeIGsGs-GY~taila~l~g~-~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~---g---  139 (215)
T d1jg1a_          68 AIMLEIANLKPGMNILEVGTGS-GWNAALISEIVKT-DVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSK---G---  139 (215)
T ss_dssp             HHHHHHHTCCTTCCEEEECCTT-SHHHHHHHHHHCS-CEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG---C---
T ss_pred             HHHHHhhccCccceEEEecCCC-ChhHHHHHHhhCc-eeEEEeccHHHHHHHHHHHHHcCCceeEEEECcccc---C---
Confidence            3456788999999999999754 8888888888785 689999987655444    46787765543322111   0   


Q ss_pred             HHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEE
Q 020768          247 IQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV  284 (321)
Q Consensus       247 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  284 (321)
                      +  .....||.++-+.+-...-+.+++.|++||+++..
T Consensus       140 ~--~~~~pfD~Iiv~~a~~~ip~~l~~qL~~gGrLv~p  175 (215)
T d1jg1a_         140 F--PPKAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIP  175 (215)
T ss_dssp             C--GGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             C--cccCcceeEEeecccccCCHHHHHhcCCCCEEEEE
Confidence            0  11467999998777666667889999999999874

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.63  E-value=0.00017  Score=56.25  Aligned_cols=100  Identities=9%  Similarity=0.083  Sum_probs=67.7

Q ss_pred             HHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCeEEecCCCcccHHHHHHHHHHH
Q 020768          172 HACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVSTNLQDIAEEVEKIQKA  250 (321)
Q Consensus       172 ~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~~~~~  250 (321)
                      ..++...+.++.+|+|+|+|+.+.+++..++..|++.+.++.++.+|.+.+ +.++...+....                
T Consensus         7 ~~l~~~~~~~~~~vlIlGaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~~~~~----------------   70 (167)
T d1npya1           7 KLIEKYHLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLE----------------   70 (167)
T ss_dssp             HHHHHTTCCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCT----------------
T ss_pred             HHHHHcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhhhccc----------------
Confidence            346677777889999999999999999999999998899999998887655 456654321110                


Q ss_pred             hCCCccEEEEcCCCH-----HH--HHHHHHHcccCCEEEEEcCCC
Q 020768          251 MGTGIDVSFDCAGFN-----KT--MSTALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       251 ~~~~~d~vid~~g~~-----~~--~~~~~~~l~~~G~~v~~g~~~  288 (321)
                       ...+|++|+|++-.     +.  +..-...+.+...++.+-...
T Consensus        71 -~~~~DliINaTpiGm~~~~~~~~l~~~~~~~~~~~~v~D~vY~P  114 (167)
T d1npya1          71 -NQQADILVNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVAMP  114 (167)
T ss_dssp             -TCCCSEEEECSSTTCTTSTTTTSCSSCHHHHHHCSEEEECCCSS
T ss_pred             -ccchhhheeccccCCccccccccccccHhhcCCcceEEEEeecc
Confidence             24589999987621     10  011123355566666665443

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.63  E-value=0.00031  Score=58.80  Aligned_cols=108  Identities=16%  Similarity=0.179  Sum_probs=68.3

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-H---HcCCCe-EEecCC-CcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-K---ELGADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~---~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      .|+++||+|+ +++|...++.+...|+ +|+.+++++++.+.+ +   +.+... .+..+- +..+..+.+.+..+..++
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   85 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG   85 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCC
Confidence            4889999998 9999999999999999 688888988776543 2   333322 121221 223334444444444456


Q ss_pred             CccEEEEcCCCHH-------------------------HHHHHHHHc--ccCCEEEEEcCCCC
Q 020768          254 GIDVSFDCAGFNK-------------------------TMSTALSAT--RAGGKVCLVGMGHL  289 (321)
Q Consensus       254 ~~d~vid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~~  289 (321)
                      .+|+++++.|...                         ..+.++..+  +.+|+++.+++...
T Consensus        86 ~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~  148 (259)
T d1xq1a_          86 KLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAG  148 (259)
T ss_dssp             CCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----
T ss_pred             CcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccc
Confidence            7999999998642                         234555555  34589999986543

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=97.62  E-value=0.00041  Score=58.02  Aligned_cols=108  Identities=13%  Similarity=0.129  Sum_probs=70.8

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCe-EEecCC-CcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      .|+++||+|+ +++|...++.+...|+ .|+.+++++++.+.+    ++.|... .+..+- +..+..+.+.++.+..+.
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   85 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   85 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence            5889999998 9999999999999999 688888988776543    2334322 222221 223333344444443455


Q ss_pred             CccEEEEcCCCHH-------------------------HHHHHHHHc--ccCCEEEEEcCCCC
Q 020768          254 GIDVSFDCAGFNK-------------------------TMSTALSAT--RAGGKVCLVGMGHL  289 (321)
Q Consensus       254 ~~d~vid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~~  289 (321)
                      .+|+++++.|...                         ..+.++..+  ..+|+++.+++...
T Consensus        86 ~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~  148 (259)
T d2ae2a_          86 KLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSG  148 (259)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGG
T ss_pred             CceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccc
Confidence            7999999988531                         234555555  44689999986433

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=0.00045  Score=57.44  Aligned_cols=105  Identities=21%  Similarity=0.208  Sum_probs=71.1

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH-cCCCeEEecCC-CcccHHHHHHHHHHHhCCCccE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vi~~~~-~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      .|+++||+|+ +++|...++.+...|+ .|+.+++++++.+.+.+ ++-...+..+- +.++..+.+.+..+. .+++|+
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~-~g~iDi   82 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRR-FGRLDC   82 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHH-HSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHh-cCCCCE
Confidence            5889999998 9999999999999999 68889999888776654 44322222221 223334444444333 357999


Q ss_pred             EEEcCCCH--------------------------HHHHHHHHHccc-CCEEEEEcCC
Q 020768          258 SFDCAGFN--------------------------KTMSTALSATRA-GGKVCLVGMG  287 (321)
Q Consensus       258 vid~~g~~--------------------------~~~~~~~~~l~~-~G~~v~~g~~  287 (321)
                      ++++.|..                          ...+.++..++. +|+++.+++.
T Consensus        83 lVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~  139 (250)
T d1ydea1          83 VVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSL  139 (250)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCH
T ss_pred             EEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccc
Confidence            99998842                          124455555544 5899999854

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=97.59  E-value=0.00013  Score=59.74  Aligned_cols=101  Identities=20%  Similarity=0.214  Sum_probs=71.3

Q ss_pred             HHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcC--CCeEEecC-CCcccHHHHHHHHH
Q 020768          172 HACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG--ADNIVKVS-TNLQDIAEEVEKIQ  248 (321)
Q Consensus       172 ~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g--~~~vi~~~-~~~~~~~~~~~~~~  248 (321)
                      ..++.+.+++|++||-+|+| .|+.++.+++.. . .|++++.+++..+.+++.-  ...+.... +....+.       
T Consensus        61 ~ml~~L~l~~g~~VLdIG~G-sGy~ta~La~l~-~-~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~~g~~-------  130 (224)
T d1vbfa_          61 FMLDELDLHKGQKVLEIGTG-IGYYTALIAEIV-D-KVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYE-------  130 (224)
T ss_dssp             HHHHHTTCCTTCEEEEECCT-TSHHHHHHHHHS-S-EEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCG-------
T ss_pred             HHHHHhhhcccceEEEecCC-CCHHHHHHHHHh-c-ccccccccHHHHHHHHHHHhcccccccccCchhhcch-------
Confidence            35678899999999999986 478888888864 3 7999999999888887632  22221111 1111111       


Q ss_pred             HHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEE
Q 020768          249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV  284 (321)
Q Consensus       249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  284 (321)
                        ....||.++-+.+-+...+.+++.|++||+++..
T Consensus       131 --~~~pfD~Iiv~~a~~~ip~~l~~qLk~GGrLV~p  164 (224)
T d1vbfa_         131 --EEKPYDRVVVWATAPTLLCKPYEQLKEGGIMILP  164 (224)
T ss_dssp             --GGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             --hhhhHHHHHhhcchhhhhHHHHHhcCCCCEEEEE
Confidence              1356999998766666667888999999999886

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=97.58  E-value=0.00049  Score=56.92  Aligned_cols=105  Identities=21%  Similarity=0.275  Sum_probs=71.9

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCe-EEecC-CCcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADN-IVKVS-TNLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~-vi~~~-~~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .|+++||+|+ +++|...++.+...|+ +|+.+++++++.+.+ ++++... .+..+ .+.++..+.+.++.+. .+++|
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~iD   80 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGA-KVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAE-FGEVD   80 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHH-TCSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcc-cCCcc
Confidence            4789999998 9999999999999999 688888998876654 4566432 12222 1223344444444433 46899


Q ss_pred             EEEEcCCCHH-------------------------HHHHHHHHc--ccCCEEEEEcCC
Q 020768          257 VSFDCAGFNK-------------------------TMSTALSAT--RAGGKVCLVGMG  287 (321)
Q Consensus       257 ~vid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~  287 (321)
                      +++++.|...                         ..+.++..+  +.+|+++.+++.
T Consensus        81 ilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~  138 (243)
T d1q7ba_          81 ILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSV  138 (243)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCH
T ss_pred             eehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecch
Confidence            9999987641                         355666666  346999999864

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.53  E-value=0.00054  Score=57.02  Aligned_cols=107  Identities=17%  Similarity=0.211  Sum_probs=73.2

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCeEEe-cCC-CcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVK-VST-NLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~vi~-~~~-~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .|+++||+|+ +++|...++.+...|+ +|+.+++++++.+.+ ++++...... .+- +..+..+.+.+..+. .+++|
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-~g~iD   82 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRR-LGTLN   82 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHH-HCSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHH-hCCCC
Confidence            5789999998 9999999999999999 688888988876644 5677554322 211 223333344444332 36799


Q ss_pred             EEEEcCCCHH-------------------------HHHHHHHHcc-cCCEEEEEcCCCC
Q 020768          257 VSFDCAGFNK-------------------------TMSTALSATR-AGGKVCLVGMGHL  289 (321)
Q Consensus       257 ~vid~~g~~~-------------------------~~~~~~~~l~-~~G~~v~~g~~~~  289 (321)
                      +++++.|...                         ..+.++..|+ .+|+++.+++...
T Consensus        83 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~  141 (253)
T d1hxha_          83 VLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSS  141 (253)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGG
T ss_pred             eEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhh
Confidence            9999998531                         2445566664 5799999986543

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=97.53  E-value=0.0001  Score=61.48  Aligned_cols=102  Identities=18%  Similarity=0.199  Sum_probs=69.6

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHHH----cC-CCeEEecCCCcccHHHHHHHH
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKE----LG-ADNIVKVSTNLQDIAEEVEKI  247 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~~----~g-~~~vi~~~~~~~~~~~~~~~~  247 (321)
                      +.+++++||++||=.|+|. |.++..+|++.|. ..|++++.+++..+.+++    ++ ...+-....   |..+.    
T Consensus        78 i~~l~i~pG~rVLEiG~Gs-G~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~---Di~~~----  149 (250)
T d1yb2a1          78 IMRCGLRPGMDILEVGVGS-GNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRS---DIADF----  149 (250)
T ss_dssp             ---CCCCTTCEEEEECCTT-SHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECS---CTTTC----
T ss_pred             HHHcCCCCcCEEEEeeeeC-cHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEe---eeecc----
Confidence            4678999999999998865 6777788887653 379999999998888764    22 333322221   21111    


Q ss_pred             HHHhCCCccEEEEcCCCH-HHHHHHHHHcccCCEEEEEc
Q 020768          248 QKAMGTGIDVSFDCAGFN-KTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       248 ~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g  285 (321)
                        .....||.|+-....+ ..+..+.+.|++||+++++.
T Consensus       150 --~~~~~fD~V~ld~p~p~~~l~~~~~~LKpGG~lv~~~  186 (250)
T d1yb2a1         150 --ISDQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYL  186 (250)
T ss_dssp             --CCSCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred             --cccceeeeeeecCCchHHHHHHHHHhcCCCceEEEEe
Confidence              1135689888655553 57789999999999999875

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.52  E-value=0.0012  Score=54.60  Aligned_cols=110  Identities=24%  Similarity=0.279  Sum_probs=72.3

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCe-EEecCCCc-ccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVSTNL-QDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-vi~~~~~~-~~~~~~~~~~~~~~~~  253 (321)
                      .|+++||+|+ +++|...+..+...|+ +|+.++++.++.+.+    ++.|... .+..+-.+ ++..+.++++.+. .+
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~-~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~-~g   83 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE-IG   83 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-TC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH-cC
Confidence            5899999998 9999999998889999 688899998876543    3455432 22222222 2333344444332 45


Q ss_pred             CccEEEEcCCCHH-------------------------HHHHHHHHccc--CCEEEEEcCCCCCcc
Q 020768          254 GIDVSFDCAGFNK-------------------------TMSTALSATRA--GGKVCLVGMGHLEMT  292 (321)
Q Consensus       254 ~~d~vid~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~~~~~~  292 (321)
                      .+|++++++|...                         ..+.++..+..  .|+++.+++..+...
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~  149 (244)
T d1yb1a_          84 DVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVS  149 (244)
T ss_dssp             CCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCC
T ss_pred             CCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCC
Confidence            7999999999751                         24455565544  478999987655433

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.48  E-value=0.0014  Score=54.30  Aligned_cols=105  Identities=17%  Similarity=0.279  Sum_probs=70.6

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH-----HHHcCCCeE-EecC-CCcccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-----AKELGADNI-VKVS-TNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~-----~~~~g~~~v-i~~~-~~~~~~~~~~~~~~~~~~  252 (321)
                      .|+++||+|+ +++|...++.+...|+ .|+.++++.++.+.     .++.|.... +..+ .+..+..+.+.+..+. .
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~-~   81 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK-F   81 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHH-c
Confidence            4789999998 9999999999999999 68888888776442     344565432 2222 1223444444444333 3


Q ss_pred             CCccEEEEcCCCH-------------------------HHHHHHHHHcc--cCCEEEEEcCC
Q 020768          253 TGIDVSFDCAGFN-------------------------KTMSTALSATR--AGGKVCLVGMG  287 (321)
Q Consensus       253 ~~~d~vid~~g~~-------------------------~~~~~~~~~l~--~~G~~v~~g~~  287 (321)
                      +++|++|+++|..                         ...+.++..+.  .+|+++.+++.
T Consensus        82 g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~  143 (251)
T d1vl8a_          82 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSL  143 (251)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCG
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccc
Confidence            5799999999863                         13556667774  45899999753

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.48  E-value=0.00011  Score=60.26  Aligned_cols=104  Identities=17%  Similarity=0.140  Sum_probs=70.1

Q ss_pred             HHHHHc--CCCCCCEEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHHH----cCC-----CeEEecCCCccc
Q 020768          172 HACRRA--NIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKE----LGA-----DNIVKVSTNLQD  239 (321)
Q Consensus       172 ~~l~~~--~~~~g~~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~~----~g~-----~~vi~~~~~~~~  239 (321)
                      ..++..  .+++|++||-+|+|. |+.++.+|+..|. ..|++++.+++-.+.+++    .+.     ..+.....   |
T Consensus        65 ~~le~L~~~l~~g~~VLdiG~Gs-Gy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~g---D  140 (224)
T d1i1na_          65 YALELLFDQLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVG---D  140 (224)
T ss_dssp             HHHHHTTTTSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEES---C
T ss_pred             HHHHHHhhccCCCCeEEEecCCC-CHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEe---e
Confidence            445654  789999999999865 7888888887653 379999999887776542    222     11111111   1


Q ss_pred             HHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEE
Q 020768          240 IAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV  284 (321)
Q Consensus       240 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  284 (321)
                      ....   +  .....||.|+.+..-....+.+++.|++||+++..
T Consensus       141 ~~~~---~--~~~~~fD~I~~~~~~~~ip~~l~~~LkpGG~LV~p  180 (224)
T d1i1na_         141 GRMG---Y--AEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILP  180 (224)
T ss_dssp             GGGC---C--GGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             cccc---c--chhhhhhhhhhhcchhhcCHHHHhhcCCCcEEEEE
Confidence            0000   0  11357999998777666677899999999999884

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.48  E-value=0.0016  Score=50.03  Aligned_cols=96  Identities=17%  Similarity=0.279  Sum_probs=65.7

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHH-HHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      -.+.++||+|+|.+|.+.++.+...|++.+.++.++.+|.+ +++++|.. .+.+    .++.+.+        ..+|+|
T Consensus        22 l~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~----~~~~~~l--------~~~Div   88 (159)
T d1gpja2          22 LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRF----DELVDHL--------ARSDVV   88 (159)
T ss_dssp             CTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCG----GGHHHHH--------HTCSEE
T ss_pred             cccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-cccc----hhHHHHh--------ccCCEE
Confidence            46789999999999999999999999988888888877654 67788854 3332    2332222        358999


Q ss_pred             EEcCCCHH------HHHHHHHHcccCC--EEEEEcCCC
Q 020768          259 FDCAGFNK------TMSTALSATRAGG--KVCLVGMGH  288 (321)
Q Consensus       259 id~~g~~~------~~~~~~~~l~~~G--~~v~~g~~~  288 (321)
                      |.|++.+.      .++..++.-+.+.  .++.++.+.
T Consensus        89 i~atss~~~ii~~~~i~~~~~~r~~~~~~~iiDlavPr  126 (159)
T d1gpja2          89 VSATAAPHPVIHVDDVREALRKRDRRSPILIIDIANPR  126 (159)
T ss_dssp             EECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCSSC
T ss_pred             EEecCCCCccccHhhhHHHHHhcccCCCeEEEeecCCC
Confidence            99998753      2333333323333  566777553

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.47  E-value=0.00052  Score=57.61  Aligned_cols=108  Identities=18%  Similarity=0.140  Sum_probs=67.9

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH-----cCCCe-EEecCCCcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-----LGADN-IVKVSTNLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~-----~g~~~-vi~~~~~~~~~~~~~~~~~~~~~~  253 (321)
                      .|+++||+|+ +++|...+..+...|+ .|+.++++.++.+.+.+     .+... .+..+....+..+...+......+
T Consensus        13 ~GK~alITGassGIG~aiA~~la~~G~-~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          13 QGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            5899999999 9999999999999999 78999999888765432     23222 222222222222222222222246


Q ss_pred             CccEEEEcCCCHH-------------------------HHHHHHHHc-ccCCEEEEEcCCCC
Q 020768          254 GIDVSFDCAGFNK-------------------------TMSTALSAT-RAGGKVCLVGMGHL  289 (321)
Q Consensus       254 ~~d~vid~~g~~~-------------------------~~~~~~~~l-~~~G~~v~~g~~~~  289 (321)
                      .+|+++.+.|...                         ..+.++..+ +.+|+++.+++..+
T Consensus        92 ~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~  153 (269)
T d1xu9a_          92 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAG  153 (269)
T ss_dssp             SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGG
T ss_pred             CccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchh
Confidence            7899998877531                         233444444 35789999986544

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=97.43  E-value=0.00084  Score=55.85  Aligned_cols=107  Identities=25%  Similarity=0.295  Sum_probs=71.4

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCe-EEecC-CCcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADN-IVKVS-TNLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~-vi~~~-~~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .|+++||+|+ +++|...++.+...|+ .|+.+++++++.+.+ ++++... .+..+ .+.++..+.+.++.+. .+++|
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~iD   81 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREE-FGSVD   81 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHH-HSCCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHH-cCCcc
Confidence            5889999998 9999999999999999 688888888776654 5666432 22222 1233444444444333 35799


Q ss_pred             EEEEcCCCHH-------------------------HHHHHHHHc--ccCCEEEEEcCCCC
Q 020768          257 VSFDCAGFNK-------------------------TMSTALSAT--RAGGKVCLVGMGHL  289 (321)
Q Consensus       257 ~vid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~~  289 (321)
                      ++|+++|...                         ..+.++..+  +.+|+++.+++...
T Consensus        82 ilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~  141 (254)
T d1hdca_          82 GLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAG  141 (254)
T ss_dssp             EEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             EEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchh
Confidence            9999988541                         234445543  34699999986543

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.43  E-value=0.00066  Score=56.09  Aligned_cols=82  Identities=24%  Similarity=0.322  Sum_probs=58.9

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-HcCCCeEEecC-CCcccHHHHHHHHHHHhCCCccE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~g~~~vi~~~-~~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      .|+++||+|+ +++|...++.+...|+ .|+.+++++++.+.+. ++++..+ ..+ .+.++..+.+.+..+.. +++|+
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~~-g~iDi   80 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPV-VMDVADPASVERGFAEALAHL-GRLDG   80 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEEE-ECCTTCHHHHHHHHHHHHHHH-SSCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCeEE-EEecCCHHHHHHHHHHHHHhc-CCceE
Confidence            4789999998 9999999999999999 6888999988877654 5665433 222 23334444455544433 57999


Q ss_pred             EEEcCCCH
Q 020768          258 SFDCAGFN  265 (321)
Q Consensus       258 vid~~g~~  265 (321)
                      +|+++|..
T Consensus        81 lVnnAG~~   88 (242)
T d1ulsa_          81 VVHYAGIT   88 (242)
T ss_dssp             EEECCCCC
T ss_pred             EEECCccc
Confidence            99998853

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=97.40  E-value=0.00055  Score=57.02  Aligned_cols=107  Identities=22%  Similarity=0.230  Sum_probs=65.0

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH---HH-cCCCeE--E--ecCCCcccHHHHHHHHHHHh
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA---KE-LGADNI--V--KVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~---~~-~g~~~v--i--~~~~~~~~~~~~~~~~~~~~  251 (321)
                      .|+++||+|+ +++|...+..+...|++.++..++.+ +.+.+   +. .+-..+  +  +...+..+..+.+.++.+..
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   82 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVE-NPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSC-CHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcc-cHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc
Confidence            4889999998 99999999999999996445444433 33322   22 232222  2  22212223444455554443


Q ss_pred             CCCccEEEEcCCCHH-----------------HHHHHHHHcc-----cCCEEEEEcCCCC
Q 020768          252 GTGIDVSFDCAGFNK-----------------TMSTALSATR-----AGGKVCLVGMGHL  289 (321)
Q Consensus       252 ~~~~d~vid~~g~~~-----------------~~~~~~~~l~-----~~G~~v~~g~~~~  289 (321)
                       +++|++++++|..+                 ..+.++..+.     ++|+++.+++..+
T Consensus        83 -g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~  141 (254)
T d1sbya1          83 -KTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTG  141 (254)
T ss_dssp             -SCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred             -CCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhh
Confidence             47999999999642                 2344555552     3588999875443

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.36  E-value=0.0016  Score=54.08  Aligned_cols=83  Identities=22%  Similarity=0.330  Sum_probs=56.6

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCC-eEE--ecC-CCcccHHHHHHHHHHHh
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGAD-NIV--KVS-TNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~-~vi--~~~-~~~~~~~~~~~~~~~~~  251 (321)
                      .|+++||+|+ +++|...+..+...|+ .|+.+++++++.+.+    ++.+.. .++  ..+ .+.++..+.+..+.+. 
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~-   86 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ-   86 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHh-
Confidence            4789999998 9999999999999999 688888988876643    333322 322  112 2234444444444443 


Q ss_pred             CCCccEEEEcCCCH
Q 020768          252 GTGIDVSFDCAGFN  265 (321)
Q Consensus       252 ~~~~d~vid~~g~~  265 (321)
                      .+++|++|++.|..
T Consensus        87 ~g~iD~lVnnAg~~  100 (257)
T d1xg5a_          87 HSGVDICINNAGLA  100 (257)
T ss_dssp             HCCCSEEEECCCCC
T ss_pred             cCCCCEEEeccccc
Confidence            36799999999864

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=97.36  E-value=0.0017  Score=54.06  Aligned_cols=105  Identities=23%  Similarity=0.324  Sum_probs=70.0

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCeE-EecC-CCcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNI-VKVS-TNLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~v-i~~~-~~~~~~~~~~~~~~~~~~~  253 (321)
                      .|+++||+|+ +++|...+..+...|+ .|+.+++++++.+.+    ++.|.+.. +..+ .+..+..+.+.+..+. .+
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g   81 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRD-FG   81 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-hC
Confidence            5889999998 9999999999999999 688899998776644    33454322 2222 1223444444444333 35


Q ss_pred             CccEEEEcCCCHH--------------------------HHHHHHHHc--ccCCEEEEEcCC
Q 020768          254 GIDVSFDCAGFNK--------------------------TMSTALSAT--RAGGKVCLVGMG  287 (321)
Q Consensus       254 ~~d~vid~~g~~~--------------------------~~~~~~~~l--~~~G~~v~~g~~  287 (321)
                      ++|+++++.|...                          ..+.++..+  +.+|+++.+++.
T Consensus        82 ~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~  143 (260)
T d1zema1          82 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASM  143 (260)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCH
T ss_pred             CCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeech
Confidence            7999999988431                          244455544  567999999854

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=0.0015  Score=54.14  Aligned_cols=105  Identities=19%  Similarity=0.191  Sum_probs=69.0

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcC----CCeE--E--ecCCCcccHHHHHHHHHHH
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELG----ADNI--V--KVSTNLQDIAEEVEKIQKA  250 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g----~~~v--i--~~~~~~~~~~~~~~~~~~~  250 (321)
                      .|+++||+|+ +++|.+.++.+...|+ .|+.++++.++.+.+ +++.    ...+  +  |.. +.++..+.+.+..+.
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~   79 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVA-DQQQLRDTFRKVVDH   79 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTT-SHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecC-CHHHHHHHHHHHHHH
Confidence            4889999998 9999999999999999 688889998776544 3332    1112  1  222 223344444444333


Q ss_pred             hCCCccEEEEcCCCHH-----------------HHHHHHHHccc-----CCEEEEEcCCC
Q 020768          251 MGTGIDVSFDCAGFNK-----------------TMSTALSATRA-----GGKVCLVGMGH  288 (321)
Q Consensus       251 ~~~~~d~vid~~g~~~-----------------~~~~~~~~l~~-----~G~~v~~g~~~  288 (321)
                       .+++|+++++.|...                 ....++..+.+     +|+++.+++..
T Consensus        80 -~G~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~  138 (254)
T d2gdza1          80 -FGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLA  138 (254)
T ss_dssp             -HSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGG
T ss_pred             -cCCcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHh
Confidence             357999999998641                 23344455533     48899998643

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=97.31  E-value=0.0016  Score=53.90  Aligned_cols=83  Identities=19%  Similarity=0.197  Sum_probs=56.3

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCC-Ce--EEecCC-CcccHHHHHHHHHHHhCCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGA-DN--IVKVST-NLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~-~~--vi~~~~-~~~~~~~~~~~~~~~~~~~  254 (321)
                      .|+++||+|+ +++|...++.+...|+ .|+.+++++++.+.+ ++++. ..  .+..+- +..+..+.+.+..+. .++
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~G~   82 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKA-FGP   82 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHH-HSS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHH-hCC
Confidence            4789999998 9999999999999999 688888888877654 34442 11  222222 223333344444333 357


Q ss_pred             ccEEEEcCCCH
Q 020768          255 IDVSFDCAGFN  265 (321)
Q Consensus       255 ~d~vid~~g~~  265 (321)
                      +|+++++.|..
T Consensus        83 iDiLVnnAg~~   93 (251)
T d1zk4a1          83 VSTLVNNAGIA   93 (251)
T ss_dssp             CCEEEECCCCC
T ss_pred             ceEEEeccccc
Confidence            99999998864

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.29  E-value=0.0013  Score=54.73  Aligned_cols=84  Identities=15%  Similarity=0.208  Sum_probs=58.1

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH----HHHcCCCe-EEecCCC-cccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~----~~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~  253 (321)
                      .|+++||+|+ +++|...++.+...|+ +|+.+++++++.+.    +++.+... .+..+-. .++..+.+.++.+..++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g   83 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   83 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            5899999998 9999999999999999 68889898866543    34455443 2222222 23333344444444456


Q ss_pred             CccEEEEcCCCH
Q 020768          254 GIDVSFDCAGFN  265 (321)
Q Consensus       254 ~~d~vid~~g~~  265 (321)
                      .+|+++++.|..
T Consensus        84 ~idilinnag~~   95 (258)
T d1ae1a_          84 KLNILVNNAGVV   95 (258)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CcEEEecccccc
Confidence            799999988864

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.27  E-value=0.0011  Score=56.16  Aligned_cols=100  Identities=12%  Similarity=0.176  Sum_probs=69.7

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCeEEecCCCcccHHHHHHHHHH
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      ++++++++|++||=+|+|- |-++..+|+..|+ .|++++.+++..+++    ++.|....+.....  ++.        
T Consensus        54 ~~~l~l~~G~~VLDiGCG~-G~~~~~~a~~~g~-~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~--d~~--------  121 (291)
T d1kpia_          54 LDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQ--GWE--------  121 (291)
T ss_dssp             HHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHSCCSSCEEEEEC--CGG--------
T ss_pred             HHhcCCCCCCEEEEecCcc-hHHHHHHHHhcCc-ceeeccchHHHHHHHHHHHHhhccchhhhhhhh--ccc--------
Confidence            4778999999999999854 3457788999999 789999998875554    45565433322111  110        


Q ss_pred             HhCCCccEEEE-----cCCC----------HHHHHHHHHHcccCCEEEEEc
Q 020768          250 AMGTGIDVSFD-----CAGF----------NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       250 ~~~~~~d~vid-----~~g~----------~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      ...+.||.|+.     .+++          +..++.+.++|+|||++++-.
T Consensus       122 ~~~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l~~  172 (291)
T d1kpia_         122 EFDEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT  172 (291)
T ss_dssp             GCCCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred             ccccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEEEE
Confidence            11467998875     3332          256888999999999998654

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.27  E-value=0.0013  Score=54.51  Aligned_cols=106  Identities=16%  Similarity=0.250  Sum_probs=67.3

Q ss_pred             CCCEEEEEcC-C--hhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCeEEecCCC-cccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-G--PIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNIVKVSTN-LQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g--~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~vi~~~~~-~~~~~~~~~~~~~~~~  252 (321)
                      .|+++||+|+ |  ++|.+.++.+...|+ .|+.++++++..+.+    +..+....+..+-. ..+..+.+.+..+. .
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~   84 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEA-F   84 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHh-c
Confidence            5889999998 5  799999999989999 577777776544333    33444444433322 23333334444333 3


Q ss_pred             CCccEEEEcCCCHH-----------------------------HHHHHHHHcccCCEEEEEcCCC
Q 020768          253 TGIDVSFDCAGFNK-----------------------------TMSTALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       253 ~~~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~  288 (321)
                      +++|+++++.|...                             ..+.+...++++|+++.+++..
T Consensus        85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~  149 (256)
T d1ulua_          85 GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYA  149 (256)
T ss_dssp             SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGG
T ss_pred             CCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehH
Confidence            57999999887410                             1223445567789999987543

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.27  E-value=0.0021  Score=53.16  Aligned_cols=106  Identities=14%  Similarity=0.156  Sum_probs=69.4

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCeE-EecCC-CcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNI-VKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~v-i~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      .++.+||+|+ +++|...+..+...|+ .|+.+++++++.+.+    ++.|.... +..+- +.++..+.+.+..+ ..+
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~-~~g   86 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILT-EHK   86 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH-HCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH-hcC
Confidence            3678899998 9999999998888999 688888988776543    34454322 22221 22333444444433 256


Q ss_pred             CccEEEEcCCCHH-------------------------HHHHHHHHc--ccCCEEEEEcCCC
Q 020768          254 GIDVSFDCAGFNK-------------------------TMSTALSAT--RAGGKVCLVGMGH  288 (321)
Q Consensus       254 ~~d~vid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~  288 (321)
                      ++|+++++.|...                         ..+.++..+  ..+|+++.+++..
T Consensus        87 ~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~  148 (251)
T d2c07a1          87 NVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIV  148 (251)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTH
T ss_pred             CceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHH
Confidence            8999999988641                         234455555  4469999998643

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.25  E-value=0.0032  Score=45.16  Aligned_cols=93  Identities=14%  Similarity=0.031  Sum_probs=63.3

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh--hHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD--YRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~--~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      .|.+|||.|+|.+|..-++.+...|+ .+++++...  +-.+++++-+. ..+.......+            -.++++|
T Consensus        11 ~~k~vlVvG~G~va~~ka~~ll~~ga-~v~v~~~~~~~~~~~~~~~~~i-~~~~~~~~~~d------------l~~~~lv   76 (113)
T d1pjqa1          11 RDRDCLIVGGGDVAERKARLLLEAGA-RLTVNALTFIPQFTVWANEGML-TLVEGPFDETL------------LDSCWLA   76 (113)
T ss_dssp             BTCEEEEECCSHHHHHHHHHHHHTTB-EEEEEESSCCHHHHHHHTTTSC-EEEESSCCGGG------------GTTCSEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeccCChHHHHHHhcCCc-eeeccCCCHHH------------hCCCcEE
Confidence            47899999999999999999999999 455554443  22333333222 22221111111            2468999


Q ss_pred             EEcCCCHHHHHHHHHHcccCCEEEEEcCC
Q 020768          259 FDCAGFNKTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       259 id~~g~~~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      +-+++....-..+....++.|.++.+.-.
T Consensus        77 ~~at~d~~~n~~i~~~a~~~~ilVNv~D~  105 (113)
T d1pjqa1          77 IAATDDDTVNQRVSDAAESRRIFCNVVDA  105 (113)
T ss_dssp             EECCSCHHHHHHHHHHHHHTTCEEEETTC
T ss_pred             eecCCCHHHHHHHHHHHHHcCCEEEeCCC
Confidence            99999876666888899999999987743

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.24  E-value=0.00083  Score=55.16  Aligned_cols=102  Identities=23%  Similarity=0.282  Sum_probs=64.5

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHH-HHHHHHH-hCCCccE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEE-VEKIQKA-MGTGIDV  257 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~-~~~~~~~-~~~~~d~  257 (321)
                      .|++|||+|+ +++|...++.+...|+ .|+.++.++++..     .............+..+. ...+.+. ...++|+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~-~V~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~   74 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   74 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCccccc-----cccceeecccCcHHHHHHHHHHHHHHhCCCCceE
Confidence            4789999998 9999999999999999 6887776654321     111111111111111111 2222222 2456999


Q ss_pred             EEEcCCCH--------------------------HHHHHHHHHcccCCEEEEEcCCC
Q 020768          258 SFDCAGFN--------------------------KTMSTALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       258 vid~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~~  288 (321)
                      +|+++|..                          ...+.++..++++|+++.+++..
T Consensus        75 lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~  131 (236)
T d1dhra_          75 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKA  131 (236)
T ss_dssp             EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred             EEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHH
Confidence            99998842                          12445667789999999998654

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=97.24  E-value=0.0035  Score=51.69  Aligned_cols=107  Identities=17%  Similarity=0.179  Sum_probs=69.5

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhH--HHHHHHcCCCeE-EecC-CCcccHHHHHHHHHHHhCCCc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYR--LSVAKELGADNI-VKVS-TNLQDIAEEVEKIQKAMGTGI  255 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~--~~~~~~~g~~~v-i~~~-~~~~~~~~~~~~~~~~~~~~~  255 (321)
                      .|+++||+|+ +++|...++.+...|+ +|+.+++++++  .+.++++|.... +..+ .+..+..+.+.+..+. .+++
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~-~G~i   81 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVIST-FGRC   81 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-HSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHH-cCCC
Confidence            4789999998 9999999999999999 67777776533  345567775432 2222 1223333444444333 3579


Q ss_pred             cEEEEcCCCHH-------------------------HHHHHHHHcc--cCCEEEEEcCCCC
Q 020768          256 DVSFDCAGFNK-------------------------TMSTALSATR--AGGKVCLVGMGHL  289 (321)
Q Consensus       256 d~vid~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~  289 (321)
                      |++++++|...                         ..+.++..+.  .+|+++.+++...
T Consensus        82 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~  142 (247)
T d2ew8a1          82 DILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTY  142 (247)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             CEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchh
Confidence            99999988631                         2445555553  3589999986543

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.22  E-value=0.003  Score=52.78  Aligned_cols=105  Identities=20%  Similarity=0.258  Sum_probs=71.1

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCC-hhHHH----HHHHcCCCeEE-ecCC-CcccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD-DYRLS----VAKELGADNIV-KVST-NLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~-~~~~~----~~~~~g~~~vi-~~~~-~~~~~~~~~~~~~~~~~  252 (321)
                      .|+++||+|+ +++|.+.++.+...|+ .|+.++++ +++.+    .+++.|.+... ..+- +.++..+.+.++.+. .
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~-~   94 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI-F   94 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHH-h
Confidence            3789999998 9999999999999999 56666555 44333    34456654432 2222 223444445544443 3


Q ss_pred             CCccEEEEcCCCHH-------------------------HHHHHHHHcccCCEEEEEcCC
Q 020768          253 TGIDVSFDCAGFNK-------------------------TMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       253 ~~~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      +++|+++.+.|...                         ..+.++..|..+|+++.++..
T Consensus        95 g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~  154 (272)
T d1g0oa_          95 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSI  154 (272)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCG
T ss_pred             CCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccc
Confidence            57999999988641                         366777888999999998753

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=0.0011  Score=55.62  Aligned_cols=103  Identities=25%  Similarity=0.337  Sum_probs=65.8

Q ss_pred             CCEE-EEEcC-ChhHHHHHH-HHHHcCCCeEEEEeCChhHHHHH----HHcCCC-eEEecCCC-cccHHHHHHHHHHHhC
Q 020768          182 ETNV-LIMGA-GPIGLVTML-GARAFGAPRIVIVDVDDYRLSVA----KELGAD-NIVKVSTN-LQDIAEEVEKIQKAMG  252 (321)
Q Consensus       182 g~~v-lI~Ga-g~vG~~a~q-la~~~g~~~vv~v~~~~~~~~~~----~~~g~~-~vi~~~~~-~~~~~~~~~~~~~~~~  252 (321)
                      |.+| ||+|+ +++|+.+++ |++..|. .|+.++++.++.+.+    ++.+.. ..+..+-. .++..+...++.+. .
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~-~   79 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKE-Y   79 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHh-c
Confidence            6677 67798 999998776 5555677 788888998876543    333432 22222222 22333333444333 3


Q ss_pred             CCccEEEEcCCCH-------------------------HHHHHHHHHcccCCEEEEEcC
Q 020768          253 TGIDVSFDCAGFN-------------------------KTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       253 ~~~d~vid~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      +++|++|++.|-.                         ...+.++..|++.|+++.+++
T Consensus        80 g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS  138 (275)
T d1wmaa1          80 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSS  138 (275)
T ss_dssp             SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred             CCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc
Confidence            5799999999852                         124556677788999999985

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=0.00057  Score=56.58  Aligned_cols=80  Identities=18%  Similarity=0.315  Sum_probs=56.5

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      .|+++||+|+ +++|...++.+...|+ .|+.+++++++.+.+.+.........+....+   ....... .-.++|+++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~---~~~~~~~-~~~~id~lV   79 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVTKKK---QIDQFAN-EVERLDVLF   79 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTCHH---HHHHHHH-HCSCCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhccCCceeeeeccccc---ccccccc-ccccceeEE
Confidence            5789999998 9999999999999999 68889999888776655433333333322223   3333322 246799999


Q ss_pred             EcCCCH
Q 020768          260 DCAGFN  265 (321)
Q Consensus       260 d~~g~~  265 (321)
                      ++.|..
T Consensus        80 n~ag~~   85 (245)
T d2ag5a1          80 NVAGFV   85 (245)
T ss_dssp             ECCCCC
T ss_pred             eccccc
Confidence            998864

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=97.20  E-value=0.0038  Score=51.78  Aligned_cols=106  Identities=25%  Similarity=0.284  Sum_probs=69.3

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCC-CeEE----ecCCCcccHHHHHHHHHHH
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGA-DNIV----KVSTNLQDIAEEVEKIQKA  250 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~-~~vi----~~~~~~~~~~~~~~~~~~~  250 (321)
                      .|+++||+|+ +++|...++.+...|+ .|+.+++++++.+.+.    +.+. ..++    |.. +.++..+.+.+..+.
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt-~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVS-DEAQVEAYVTATTER   80 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTT-SHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCC-CHHHHHHHHHHHHHH
Confidence            4789999998 9999999999999999 6888999987765432    2222 2222    222 233444444444333


Q ss_pred             hCCCccEEEEcCCCH--------------------------HHHHHHHHHc--ccCCEEEEEcCCCC
Q 020768          251 MGTGIDVSFDCAGFN--------------------------KTMSTALSAT--RAGGKVCLVGMGHL  289 (321)
Q Consensus       251 ~~~~~d~vid~~g~~--------------------------~~~~~~~~~l--~~~G~~v~~g~~~~  289 (321)
                       .+++|+++++.|..                          ...+.++..+  +.+|+++.+++...
T Consensus        81 -~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~  146 (258)
T d1iy8a_          81 -FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGG  146 (258)
T ss_dssp             -HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGG
T ss_pred             -hCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhh
Confidence             35799999998732                          1234455554  35699999986543

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.19  E-value=0.0011  Score=55.19  Aligned_cols=105  Identities=20%  Similarity=0.265  Sum_probs=70.3

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHH----HHHHcCCCeE-EecCC-CcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS----VAKELGADNI-VKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~----~~~~~g~~~v-i~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      .|+++||+|+ +++|...++.+...|+++++...+++++.+    .+++.|.+.. +..+- +..+..+.+.+..+. .+
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~-~g   83 (259)
T d1ja9a_           5 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH-FG   83 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHH-cC
Confidence            5899999998 999999999999999954444455555433    3445665432 22222 223334444444433 35


Q ss_pred             CccEEEEcCCCH-------------------------HHHHHHHHHcccCCEEEEEcC
Q 020768          254 GIDVSFDCAGFN-------------------------KTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       254 ~~d~vid~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      ++|+++++.|..                         ...+.++..++.+|.++.+..
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s  141 (259)
T d1ja9a_          84 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSS  141 (259)
T ss_dssp             CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             CCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccc
Confidence            699999999864                         146677788888898888864

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.18  E-value=0.0014  Score=54.01  Aligned_cols=104  Identities=22%  Similarity=0.156  Sum_probs=70.5

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++....+..+-.+.   +.++++.+. -+++|++
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~---~~v~~~~~~-~g~iDil   80 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDLGDW---EATERALGS-VGPVDLL   80 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCH---HHHHHHHTT-CCCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCCCH---HHHHHHHHH-hCCceEE
Confidence            6899999998 9999999999999999 688899998887654 4555433333332222   234444332 3579999


Q ss_pred             EEcCCCHH-------------------------HHHHHHH-Hcc--cCCEEEEEcCCCC
Q 020768          259 FDCAGFNK-------------------------TMSTALS-ATR--AGGKVCLVGMGHL  289 (321)
Q Consensus       259 id~~g~~~-------------------------~~~~~~~-~l~--~~G~~v~~g~~~~  289 (321)
                      +++.|...                         ..+.++. +++  .+|+++.+++...
T Consensus        81 VnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~  139 (244)
T d1pr9a_          81 VNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCS  139 (244)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG
T ss_pred             EeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccc
Confidence            99988641                         2344555 333  4689999986433

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=97.14  E-value=0.0064  Score=49.78  Aligned_cols=107  Identities=21%  Similarity=0.214  Sum_probs=73.4

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCeE-EecCC-CcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNI-VKVST-NLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~v-i~~~~-~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .|+++||+|+ +++|...++-+...|+ +|+.+.++.++.+.+ ++++.+.. +..+- +.++..+.+.++.+. .+++|
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~-~g~iD   81 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEE-FGRLH   81 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHH-HSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHH-hCCcc
Confidence            5889999998 9999999999999999 688888888876654 56775432 21121 223333334444332 35799


Q ss_pred             EEEEcCCCHH-------------------------HHHHHHHHcccCCEEEEEcCCCC
Q 020768          257 VSFDCAGFNK-------------------------TMSTALSATRAGGKVCLVGMGHL  289 (321)
Q Consensus       257 ~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~~  289 (321)
                      +.|++.|...                         ..+.++..+..++.++..+....
T Consensus        82 iLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~  139 (241)
T d2a4ka1          82 GVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAG  139 (241)
T ss_dssp             EEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTT
T ss_pred             Eeccccccccccchhhhhccccccccccccccccccccccccccccccceeecccccc
Confidence            9999887531                         24566677888888887775543

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.11  E-value=0.00037  Score=55.46  Aligned_cols=75  Identities=13%  Similarity=0.241  Sum_probs=52.2

Q ss_pred             CCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-Hc----CCC-eEEecCCCcccHHHHHHHHHHHhC
Q 020768          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-EL----GAD-NIVKVSTNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       180 ~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~----g~~-~vi~~~~~~~~~~~~~~~~~~~~~  252 (321)
                      =.|++++|+|+ |++|..+++.+...|+ +|+.++++.++.+.+. ++    ... ...+..    + .+.++++    -
T Consensus        21 l~gK~vlItGasgGIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~----~-~~~~~~~----~   90 (191)
T d1luaa1          21 VKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETA----D-DASRAEA----V   90 (191)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECC----S-HHHHHHH----T
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHhhcc-chhhcccchHHHHHHHHHHHhccchhhhhhhcc----c-HHHHHHH----h
Confidence            37899999998 9999999999999999 6888999987765443 22    222 222222    1 2233332    3


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      +++|++|++.|.
T Consensus        91 ~~iDilin~Ag~  102 (191)
T d1luaa1          91 KGAHFVFTAGAI  102 (191)
T ss_dssp             TTCSEEEECCCT
T ss_pred             cCcCeeeecCcc
Confidence            579999999874

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=97.09  E-value=0.0023  Score=54.10  Aligned_cols=83  Identities=16%  Similarity=0.169  Sum_probs=54.9

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH-----HHHcCCCe-EEecCCCcccH-HHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-----AKELGADN-IVKVSTNLQDI-AEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~-----~~~~g~~~-vi~~~~~~~~~-~~~~~~~~~~~~  252 (321)
                      .|+++||+|+ +++|.+.+..+...|+ +|+.+++++++.+.     ..+.|... .+..+-.+.+- .+..... ....
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga-~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~-~~~~  101 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSEL-IKVA  101 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHH-HHHT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhh-hhhc
Confidence            4789999998 9999999999999999 68888888776442     23345432 23222222222 2222232 2336


Q ss_pred             CCccEEEEcCCCH
Q 020768          253 TGIDVSFDCAGFN  265 (321)
Q Consensus       253 ~~~d~vid~~g~~  265 (321)
                      +++|+++++.|..
T Consensus       102 g~iDilvnnAg~~  114 (294)
T d1w6ua_         102 GHPNIVINNAAGN  114 (294)
T ss_dssp             CSCSEEEECCCCC
T ss_pred             cccchhhhhhhhc
Confidence            7899999998854

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.09  E-value=0.00053  Score=57.00  Aligned_cols=100  Identities=14%  Similarity=0.125  Sum_probs=66.1

Q ss_pred             EEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcC----CCeEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG----ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       184 ~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g----~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      ++||+|+ +++|...+..+...|+ +|++++++.++.+.++..+    ...+.    +..+..+.+.+..+. .+++|++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~dv~----~~~~~~~~~~~~~~~-~G~iDiL   75 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKPM----SEQEPAELIEAVTSA-YGQVDVL   75 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEEC----CCCSHHHHHHHHHHH-HSCCCEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhhhCcEEEeccC----CHHHHHHHHHHHHHH-cCCCCEE
Confidence            6899998 9999999999999999 6888888877766555432    22222    223444445554443 3579999


Q ss_pred             EEcCCCH-H-------------------------HHHHHHHHcc--cCCEEEEEcCCCC
Q 020768          259 FDCAGFN-K-------------------------TMSTALSATR--AGGKVCLVGMGHL  289 (321)
Q Consensus       259 id~~g~~-~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~  289 (321)
                      |++.|.. .                         ..+.++..|+  .+|+++.+++...
T Consensus        76 VnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~  134 (252)
T d1zmta1          76 VSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATP  134 (252)
T ss_dssp             EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTT
T ss_pred             EECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccc
Confidence            9876632 0                         2334555553  3699999986544

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.08  E-value=0.0021  Score=52.94  Aligned_cols=79  Identities=25%  Similarity=0.196  Sum_probs=55.5

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      .|+++||+|+ +++|...++.+...|+ +|+.+++++++.+.+ ++++....+..+-.+.   +.+++..+. -+++|++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~---~~v~~~~~~-~g~iDil   78 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDLGDW---DATEKALGG-IGPVDLL   78 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCH---HHHHHHHTT-CCCCSEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCCCH---HHHHHHHHH-cCCCeEE
Confidence            4899999998 9999999999999999 688888888776644 4555433333322222   234444332 3579999


Q ss_pred             EEcCCC
Q 020768          259 FDCAGF  264 (321)
Q Consensus       259 id~~g~  264 (321)
                      +++.|.
T Consensus        79 VnnAg~   84 (242)
T d1cyda_          79 VNNAAL   84 (242)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999885

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=97.06  E-value=0.0018  Score=53.84  Aligned_cols=83  Identities=23%  Similarity=0.250  Sum_probs=58.1

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHH-HHHHcCCCeEE-ecC-CCcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADNIV-KVS-TNLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~-~~~~~g~~~vi-~~~-~~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .|+++||+|+ +++|...++.+...|+ +|+.++++.++.+ .++++|..... ..+ .+.++..+.+.+..+. .+++|
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~-~g~iD   81 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGA-RVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDR-WGSID   81 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTE-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHH-HSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHH-hCCcc
Confidence            4788999998 9999999999999999 6888888887766 45678765322 211 1223344444444333 35799


Q ss_pred             EEEEcCCCH
Q 020768          257 VSFDCAGFN  265 (321)
Q Consensus       257 ~vid~~g~~  265 (321)
                      +++++.|..
T Consensus        82 ilVnnAg~~   90 (256)
T d1k2wa_          82 ILVNNAALF   90 (256)
T ss_dssp             EEEECCCCC
T ss_pred             EEEeecccc
Confidence            999998853

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.03  E-value=0.00086  Score=54.65  Aligned_cols=105  Identities=20%  Similarity=0.255  Sum_probs=66.9

Q ss_pred             HHHHHc--CCCCCCEEEEEcCChhHHHHHHHHHH---cCC---CeEEEEeCChhHHHHHHH---------cCCCeEEecC
Q 020768          172 HACRRA--NIGPETNVLIMGAGPIGLVTMLGARA---FGA---PRIVIVDVDDYRLSVAKE---------LGADNIVKVS  234 (321)
Q Consensus       172 ~~l~~~--~~~~g~~vlI~Gag~vG~~a~qla~~---~g~---~~vv~v~~~~~~~~~~~~---------~g~~~vi~~~  234 (321)
                      +.++..  .+++|++||.+|+|. |+.++.+++.   .|.   .+|++++.+++-.+.+++         ++...+....
T Consensus        69 ~~l~~L~~~l~~g~~VLeIGtGs-GY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~  147 (223)
T d1r18a_          69 FALEYLRDHLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVE  147 (223)
T ss_dssp             HHHHHTTTTCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred             HHHHHHhhccCCCCeEEEecCCC-CHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEe
Confidence            345544  789999999998743 5555555554   443   269999999876666543         1222332221


Q ss_pred             CC-cccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEE-EcC
Q 020768          235 TN-LQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCL-VGM  286 (321)
Q Consensus       235 ~~-~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~-~g~  286 (321)
                      .+ ...+         .....||.|+-+.+-+..-+..++.|++||+++. +|.
T Consensus       148 ~d~~~~~---------~~~~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV~pvg~  192 (223)
T d1r18a_         148 GDGRKGY---------PPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVPVGP  192 (223)
T ss_dssp             SCGGGCC---------GGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEESC
T ss_pred             ccccccc---------ccccceeeEEEEeechhchHHHHHhcCCCcEEEEEEec
Confidence            11 1111         0135799998877766666788999999999987 453

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.03  E-value=0.0021  Score=52.98  Aligned_cols=107  Identities=18%  Similarity=0.176  Sum_probs=71.6

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCeE-EecCC-CcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNI-VKVST-NLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~v-i~~~~-~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .|+++||+|+ +++|...++.+...|+ +|+.+++++++.+.+ ++++-... +..+- +.++..+.++++.+. .+++|
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~id   82 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTA-FGGLH   82 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHH-HSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHH-hCCCe
Confidence            5789999998 9999999999999999 688899998887654 45653222 21211 223344444454443 35699


Q ss_pred             EEEEcCCCHH-------------------------HHHHHHHHc--ccCCEEEEEcCCCC
Q 020768          257 VSFDCAGFNK-------------------------TMSTALSAT--RAGGKVCLVGMGHL  289 (321)
Q Consensus       257 ~vid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~~  289 (321)
                      +++++.|...                         ..+.++..+  +.+|+++.+++...
T Consensus        83 ilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~  142 (244)
T d1nffa_          83 VLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEG  142 (244)
T ss_dssp             EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             EEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccc
Confidence            9999998641                         233444554  34689999986543

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=97.03  E-value=0.0013  Score=55.14  Aligned_cols=106  Identities=18%  Similarity=0.227  Sum_probs=74.6

Q ss_pred             HHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHH
Q 020768          171 LHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVE  245 (321)
Q Consensus       171 ~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~  245 (321)
                      .+.+..++++||++||=.|+|. |.+++.+|+..+. ..|++++.+++..+.++    ++|....+.....  +..+   
T Consensus        93 ~~Ii~~l~i~pG~~VLDiG~Gs-G~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~--d~~~---  166 (266)
T d1o54a_          93 SFIAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVR--DISE---  166 (266)
T ss_dssp             HHHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECC--CGGG---
T ss_pred             HHHHHhhCCCCCCEEEECCCCC-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEec--cccc---
Confidence            3356789999999999999866 7778888988753 27999999998877765    4554322221111  1110   


Q ss_pred             HHHHHhCCCccEEEEcCCCH-HHHHHHHHHcccCCEEEEEc
Q 020768          246 KIQKAMGTGIDVSFDCAGFN-KTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       246 ~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g  285 (321)
                         ......+|.|+--...+ ..++.+.++|+|||+++.+.
T Consensus       167 ---~~~~~~~D~V~~d~p~p~~~l~~~~~~LKpGG~lv~~~  204 (266)
T d1o54a_         167 ---GFDEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVC  204 (266)
T ss_dssp             ---CCSCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred             ---cccccceeeeEecCCCHHHHHHHHHhhcCCCCEEEEEe
Confidence               01235688888777764 57889999999999999875

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.03  E-value=0.0016  Score=54.92  Aligned_cols=99  Identities=12%  Similarity=0.233  Sum_probs=67.8

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHH
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      ++++++++|++||=+|+|. |..+..+++..|+ .|++++.+++..+++++    .|....+....  .++.    +   
T Consensus        45 ~~~l~l~~g~~VLDiGCG~-G~~a~~~a~~~g~-~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~--~d~~----~---  113 (280)
T d2fk8a1          45 LDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLL--QGWE----D---  113 (280)
T ss_dssp             HTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEE--SCGG----G---
T ss_pred             HHHcCCCCCCEEEEecCCc-hHHHHHHHHhCce-eEEEecchHHHHHHHHHHHHhhccccchhhhh--hhhh----h---
Confidence            4678999999999999864 3456778888898 79999999988777654    34432221111  1111    1   


Q ss_pred             HhCCCccEEEE-----cCCC---HHHHHHHHHHcccCCEEEEE
Q 020768          250 AMGTGIDVSFD-----CAGF---NKTMSTALSATRAGGKVCLV  284 (321)
Q Consensus       250 ~~~~~~d~vid-----~~g~---~~~~~~~~~~l~~~G~~v~~  284 (321)
                       ....+|.|+.     .++.   +..++.+.+.|+|+|++++-
T Consensus       114 -~~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~i~  155 (280)
T d2fk8a1         114 -FAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQ  155 (280)
T ss_dssp             -CCCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEE
T ss_pred             -hccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCCceEEEE
Confidence             1457888864     3332   24688899999999999874

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=97.01  E-value=0.0034  Score=52.10  Aligned_cols=107  Identities=19%  Similarity=0.244  Sum_probs=67.3

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCCh-hHHHHH-----HHcCCCeEE-ecC-CCcccHHHHHHHHHHHh
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD-YRLSVA-----KELGADNIV-KVS-TNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~-~~~~~~-----~~~g~~~vi-~~~-~~~~~~~~~~~~~~~~~  251 (321)
                      .|+++||+|+ +++|...++.+...|+ +|+.+++++ ++.+.+     ++.|..... ..+ .+.++..+.+.+..+. 
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~-   80 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ-   80 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH-
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH-
Confidence            5789999998 9999999999999999 687777753 333322     234544322 111 1223334444444333 


Q ss_pred             CCCccEEEEcCCCHH-------------------------HHHHHHHHccc--CCEEEEEcCCCC
Q 020768          252 GTGIDVSFDCAGFNK-------------------------TMSTALSATRA--GGKVCLVGMGHL  289 (321)
Q Consensus       252 ~~~~d~vid~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~~~  289 (321)
                      .+++|++|+++|...                         ..+.++..+..  +|+++.+++..+
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~  145 (260)
T d1x1ta1          81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHG  145 (260)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             hCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccc
Confidence            357999999988541                         24455666543  589999986433

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=96.99  E-value=0.0028  Score=52.91  Aligned_cols=105  Identities=21%  Similarity=0.294  Sum_probs=69.6

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCC---eEEecC-CCcccHHHHHHHHHHHhCCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGAD---NIVKVS-TNLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~---~vi~~~-~~~~~~~~~~~~~~~~~~~~  254 (321)
                      .|+++||+|+ +++|...++.+...|+ +|+.+++++++.+.+ ++++..   ..+..+ .+.++..+.+.++.+. .+.
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~   82 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAK-HGK   82 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHH-HSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHH-cCC
Confidence            5889999998 9999999999999999 688888988877654 445432   122222 1223444444444433 357


Q ss_pred             ccEEEEcCCCH---------------------------HHHHHHHHHc--ccCCEEEEEcCC
Q 020768          255 IDVSFDCAGFN---------------------------KTMSTALSAT--RAGGKVCLVGMG  287 (321)
Q Consensus       255 ~d~vid~~g~~---------------------------~~~~~~~~~l--~~~G~~v~~g~~  287 (321)
                      +|+++++.|..                           ...+.++..+  +.+|+++.+++.
T Consensus        83 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~  144 (268)
T d2bgka1          83 LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASI  144 (268)
T ss_dssp             CCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCG
T ss_pred             cceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccc
Confidence            99999998742                           1244566665  345788888743

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.99  E-value=0.0038  Score=52.66  Aligned_cols=100  Identities=15%  Similarity=0.161  Sum_probs=68.8

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHH
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      ++++++++|++||=+|+|- |..++.+|+..|+ .|.+++.+++..+++++    .|...-+....  .++.    +   
T Consensus        55 ~~~l~l~~G~~VLDiGCG~-G~~a~~~a~~~g~-~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~--~d~~----~---  123 (285)
T d1kpga_          55 LGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLL--AGWE----Q---  123 (285)
T ss_dssp             HTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEE--SCGG----G---
T ss_pred             HHHcCCCCCCEEEEecCcc-hHHHHHHHhcCCc-ceEEEeccHHHHHHHHHHHHhhhhhhhhHHHH--hhhh----c---
Confidence            3678999999999999854 6778889999999 79999999988777654    33222111111  1211    1   


Q ss_pred             HhCCCccEEEE-----cCCC---HHHHHHHHHHcccCCEEEEEc
Q 020768          250 AMGTGIDVSFD-----CAGF---NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       250 ~~~~~~d~vid-----~~g~---~~~~~~~~~~l~~~G~~v~~g  285 (321)
                       ....+|.++.     .++.   ...+..+.++|+|+|++++-.
T Consensus       124 -~~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l~~  166 (285)
T d1kpga_         124 -FDEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHT  166 (285)
T ss_dssp             -CCCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             -ccccccceeeehhhhhcCchhHHHHHHHHHhhcCCCCcEEEEE
Confidence             1456888775     3332   246788899999999998644

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.98  E-value=0.0018  Score=54.03  Aligned_cols=105  Identities=22%  Similarity=0.241  Sum_probs=72.9

Q ss_pred             HHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHHH----c-C--CCeEEecCCCcccHHHH
Q 020768          172 HACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKE----L-G--ADNIVKVSTNLQDIAEE  243 (321)
Q Consensus       172 ~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~~----~-g--~~~vi~~~~~~~~~~~~  243 (321)
                      ..+..++++||++||=.|+|. |.+++.+|+..|. ..|++++.+++..+.+++    + +  .+.+.....   |..+ 
T Consensus        87 ~Ii~~l~i~PG~~VLE~G~Gs-G~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~---d~~~-  161 (264)
T d1i9ga_          87 QIVHEGDIFPGARVLEAGAGS-GALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVS---DLAD-  161 (264)
T ss_dssp             HHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECS---CGGG-
T ss_pred             HHHHHhCCCCCCEEEecCcCC-cHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEec---cccc-
Confidence            345779999999999888755 7888888998764 279999999998888764    2 1  233322211   1111 


Q ss_pred             HHHHHHHhCCCccEEEEcCCCH-HHHHHHHHHcccCCEEEEEc
Q 020768          244 VEKIQKAMGTGIDVSFDCAGFN-KTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       244 ~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g  285 (321)
                         . ......+|.||-...++ ..+..+.+.|+++|+++++-
T Consensus       162 ---~-~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpGG~lv~~~  200 (264)
T d1i9ga_         162 ---S-ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYV  200 (264)
T ss_dssp             ---C-CCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             ---c-cccCCCcceEEEecCCHHHHHHHHHhccCCCCEEEEEe
Confidence               0 01145689877666653 56788999999999998875

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.98  E-value=0.0014  Score=53.64  Aligned_cols=101  Identities=19%  Similarity=0.270  Sum_probs=62.8

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHH-HHHHHHHH-hCCCccEE
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAE-EVEKIQKA-MGTGIDVS  258 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~-~~~~~~~~-~~~~~d~v  258 (321)
                      +.+|||+|+ +++|.+.++.+...|+ .|+.+++++++...     ....+..+....+..+ ........ ..+++|++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~-~V~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~l   75 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQAD-----SNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   75 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTSS-----EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCchhccc-----ccceeccccCchhHHHHHHHHHHHHhcCCCeeEE
Confidence            357899998 9999999999999999 68888877653211     1111111111111111 11122111 35679999


Q ss_pred             EEcCCCH--------------------------HHHHHHHHHcccCCEEEEEcCCC
Q 020768          259 FDCAGFN--------------------------KTMSTALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       259 id~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~~  288 (321)
                      |+++|..                          ...+.++..++++|+++.++...
T Consensus        76 innAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~  131 (235)
T d1ooea_          76 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAA  131 (235)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred             EECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHH
Confidence            9998842                          12456677888999999998543

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.97  E-value=0.006  Score=51.80  Aligned_cols=104  Identities=20%  Similarity=0.274  Sum_probs=67.1

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCC---------hhHHH-HH---HHcCCCeEEecCCCcccHHHHHHH
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD---------DYRLS-VA---KELGADNIVKVSTNLQDIAEEVEK  246 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~---------~~~~~-~~---~~~g~~~vi~~~~~~~~~~~~~~~  246 (321)
                      .|+++||+|+ +++|...++.+...|+ .|++.+.+         .++.+ ..   ...+.....+..+ ..+..+.+.+
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga-~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~v~~   83 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDS-VEAGEKLVKT   83 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCC-GGGHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccch-HHHHHHHHHH
Confidence            4789999998 9999999999999999 57776543         22222 22   2334444444432 2344444554


Q ss_pred             HHHHhCCCccEEEEcCCCHH-------------------------HHHHHHHHcc--cCCEEEEEcCC
Q 020768          247 IQKAMGTGIDVSFDCAGFNK-------------------------TMSTALSATR--AGGKVCLVGMG  287 (321)
Q Consensus       247 ~~~~~~~~~d~vid~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~  287 (321)
                      ..+. .+++|++|++.|...                         ..+.++..++  .+|+|+.+++.
T Consensus        84 ~~~~-~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~  150 (302)
T d1gz6a_          84 ALDT-FGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASA  150 (302)
T ss_dssp             HHHH-TSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCH
T ss_pred             HHHH-cCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCCh
Confidence            4433 567999999988541                         3455666663  45899999864

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.97  E-value=0.0014  Score=56.36  Aligned_cols=107  Identities=20%  Similarity=0.253  Sum_probs=69.7

Q ss_pred             HHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCC-eEEEEeCChhHHHHHHH----cC-----------CCeEEecCC
Q 020768          172 HACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAP-RIVIVDVDDYRLSVAKE----LG-----------ADNIVKVST  235 (321)
Q Consensus       172 ~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~-~vv~v~~~~~~~~~~~~----~g-----------~~~vi~~~~  235 (321)
                      +.+..++++||++||=.|+|. |.+++.+|++.|.+ .|++++.+++..+.+++    ++           .+.+-....
T Consensus        89 ~Il~~l~i~pG~rVLE~GtGs-G~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~  167 (324)
T d2b25a1          89 MILSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHK  167 (324)
T ss_dssp             HHHHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEES
T ss_pred             HHHHHhCCCCCCEEEEecccc-cHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEec
Confidence            345778999999999888865 88888999987643 79999999988887764    11           122211111


Q ss_pred             CcccHHHHHHHHHHHhCCCccEEEEcCCCH-HHHHHHHHHcccCCEEEEEc
Q 020768          236 NLQDIAEEVEKIQKAMGTGIDVSFDCAGFN-KTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g  285 (321)
                      +-.++..   .+   ....+|.||--...+ ..+..+.+.|++||+++++-
T Consensus       168 di~~~~~---~~---~~~~fD~V~LD~p~P~~~l~~~~~~LKpGG~lv~~~  212 (324)
T d2b25a1         168 DISGATE---DI---KSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYV  212 (324)
T ss_dssp             CTTCCC-------------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEE
T ss_pred             chhhccc---cc---CCCCcceEeecCcCHHHHHHHHHHhccCCCEEEEEe
Confidence            1111111   11   124588887555543 47889999999999999875

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.97  E-value=0.0061  Score=46.86  Aligned_cols=98  Identities=12%  Similarity=0.039  Sum_probs=65.9

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  261 (321)
                      +++|+|+|+|.+|..+++.+...|. .|++++++.++.+.+.+-.....+..... .. .......    -...|.++.+
T Consensus         2 ~K~IliiGaG~~G~~~a~~L~~~g~-~V~v~dr~~~~a~~l~~~~~~~~~~~~~~-~~-~~~~~~~----i~~~~~~i~~   74 (182)
T d1e5qa1           2 TKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPISLDV-ND-DAALDAE----VAKHDLVISL   74 (182)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESCHHHHHHHHTTCTTEEEEECCT-TC-HHHHHHH----HTTSSEEEEC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECChHHHHHHHhcccccccccccc-cc-hhhhHhh----hhccceeEee
Confidence            5799999999999999999999999 69999999998887665333232222211 11 2222222    1357888888


Q ss_pred             CCCHHHHHHHHHHcccCCEEEEEcC
Q 020768          262 AGFNKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       262 ~g~~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      ............++..+..++....
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~   99 (182)
T d1e5qa1          75 IPYTFHATVIKSAIRQKKHVVTTSY   99 (182)
T ss_dssp             SCGGGHHHHHHHHHHHTCEEECSSC
T ss_pred             ccchhhhHHHHHHHhhccceeeccc
Confidence            8776565566666676777766654

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.95  E-value=0.0041  Score=47.67  Aligned_cols=87  Identities=18%  Similarity=0.136  Sum_probs=58.4

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCC-CeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcC
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA-DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~-~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  262 (321)
                      +|.|+|+|.+|...+..++..|. .|++.++++++.+.+++.|. +...+.   . +      .     -...|+||-|+
T Consensus         2 kI~iIG~G~mG~~lA~~l~~~g~-~V~~~d~~~~~~~~a~~~~~~~~~~~~---~-~------~-----~~~~DiIilav   65 (165)
T d2f1ka2           2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQD---L-S------L-----LQTAKIIFLCT   65 (165)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEESC---G-G------G-----GTTCSEEEECS
T ss_pred             EEEEEeecHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHhhccceeeee---c-c------c-----ccccccccccC
Confidence            58899999999988888888998 68899999999999998885 333221   0 0      0     13567888777


Q ss_pred             CCHH---HHHHHHHHcccCCEEEEEcC
Q 020768          263 GFNK---TMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       263 g~~~---~~~~~~~~l~~~G~~v~~g~  286 (321)
                      ..+.   .++.+...++++..++.++.
T Consensus        66 p~~~~~~vl~~l~~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          66 PIQLILPTLEKLIPHLSPTAIVTDVAS   92 (165)
T ss_dssp             CHHHHHHHHHHHGGGSCTTCEEEECCS
T ss_pred             cHhhhhhhhhhhhhhcccccceeeccc
Confidence            6432   23333344455555555543

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=96.89  E-value=0.0033  Score=49.17  Aligned_cols=102  Identities=10%  Similarity=0.019  Sum_probs=66.8

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcC-CCeEE---------e------cCCCc
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG-ADNIV---------K------VSTNL  237 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g-~~~vi---------~------~~~~~  237 (321)
                      +....+.||.+||..|+|. |..+..+|+ .|+ .|+++|.+++-.+.+++.- .....         .      +..+.
T Consensus        13 ~~~l~~~~~~rvLd~GCG~-G~~a~~la~-~G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~   89 (201)
T d1pjza_          13 WSSLNVVPGARVLVPLCGK-SQDMSWLSG-QGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF   89 (201)
T ss_dssp             HHHHCCCTTCEEEETTTCC-SHHHHHHHH-HCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC
T ss_pred             HHHcCCCCCCEEEEecCcC-CHHHHHHHH-cCC-ceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccc
Confidence            3456789999999999865 678888887 488 7999999999999887632 11110         0      00000


Q ss_pred             ccHHHHHHHHHHHhCCCccEEEEcCCC--------HHHHHHHHHHcccCCEEEEEc
Q 020768          238 QDIAEEVEKIQKAMGTGIDVSFDCAGF--------NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      .++...       ....+|+|++...-        ...++.+.+.|+++|++++..
T Consensus        90 ~~l~~~-------~~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~~  138 (201)
T d1pjza_          90 FALTAR-------DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT  138 (201)
T ss_dssp             SSSTHH-------HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred             cccccc-------cccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEEEEE
Confidence            011000       12457998884331        245778889999999987654

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.89  E-value=0.0024  Score=53.01  Aligned_cols=83  Identities=18%  Similarity=0.245  Sum_probs=56.0

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH----HHHcCCCeE-EecCC-CcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGADNI-VKVST-NLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~----~~~~g~~~v-i~~~~-~~~~~~~~~~~~~~~~~~  253 (321)
                      .|+++||+|+ +++|...++.+...|+ .|+.+++++++.+.    +++.|.... +..+- +.++..+.+.+..+. .+
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~-~g   87 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK-LG   87 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence            5889999998 9999999999999999 68888888876554    344554432 22221 222333334444333 35


Q ss_pred             CccEEEEcCCCH
Q 020768          254 GIDVSFDCAGFN  265 (321)
Q Consensus       254 ~~d~vid~~g~~  265 (321)
                      ++|+++++.|..
T Consensus        88 ~iDilvnnAG~~   99 (255)
T d1fmca_          88 KVDILVNNAGGG   99 (255)
T ss_dssp             SCCEEEECCCCC
T ss_pred             CCCEeeeCCcCC
Confidence            799999998864

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.86  E-value=0.0016  Score=53.87  Aligned_cols=83  Identities=17%  Similarity=0.215  Sum_probs=55.2

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCC-eEEEEeCChhHHHHHHHcCCCe--EEecCC-CcccHHHHHHHHHHHh-CCCc
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAP-RIVIVDVDDYRLSVAKELGADN--IVKVST-NLQDIAEEVEKIQKAM-GTGI  255 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~-~vv~v~~~~~~~~~~~~~g~~~--vi~~~~-~~~~~~~~~~~~~~~~-~~~~  255 (321)
                      .++|||+|+ +++|...++.+...|+. .|+.+.++.++.+.+++.....  ++..+- +.++..+...++.+.. ..++
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i   82 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence            478999999 99999999888888864 5777888888887777654332  222222 2223333344443332 3469


Q ss_pred             cEEEEcCCC
Q 020768          256 DVSFDCAGF  264 (321)
Q Consensus       256 d~vid~~g~  264 (321)
                      |++++++|.
T Consensus        83 dilinnAG~   91 (250)
T d1yo6a1          83 SLLINNAGV   91 (250)
T ss_dssp             CEEEECCCC
T ss_pred             EEEEEcCcc
Confidence            999999984

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=96.85  E-value=0.0056  Score=50.62  Aligned_cols=83  Identities=20%  Similarity=0.239  Sum_probs=55.5

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCeE-EecC-CCcccHHHHHHHHHHHhCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNI-VKVS-TNLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~v-i~~~-~~~~~~~~~~~~~~~~~~~  253 (321)
                      .|+.+||+|+ +++|.+.+..+...|+ .|+.+++++++.+.+    ++.|.... +..+ .+.++..+.+.+..+. .+
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~-~g   78 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVER-YG   78 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-TC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH-hC
Confidence            3677899998 9999999999999999 688888987765543    34554432 2211 1223344444444332 46


Q ss_pred             CccEEEEcCCCH
Q 020768          254 GIDVSFDCAGFN  265 (321)
Q Consensus       254 ~~d~vid~~g~~  265 (321)
                      ++|++|+++|..
T Consensus        79 ~iDilVnnAG~~   90 (257)
T d2rhca1          79 PVDVLVNNAGRP   90 (257)
T ss_dssp             SCSEEEECCCCC
T ss_pred             CCCEEEeccccc
Confidence            799999998864

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=96.83  E-value=0.0027  Score=53.30  Aligned_cols=81  Identities=22%  Similarity=0.265  Sum_probs=56.3

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCeE-EecC-CCcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNI-VKVS-TNLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~v-i~~~-~~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .|+++||+|+ +++|...++.+...|+ .|+.+++++++.+.+ ++++.... +..+ .+.++..+.+.+..+. .+.+|
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-~g~id   81 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGA-KVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVAR-FGKID   81 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHH-HSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHH-hCCcc
Confidence            4899999998 9999999999999999 688899998887644 45664322 2111 1223333444444332 35799


Q ss_pred             EEEEcCC
Q 020768          257 VSFDCAG  263 (321)
Q Consensus       257 ~vid~~g  263 (321)
                      +++++.|
T Consensus        82 ilvnnAG   88 (276)
T d1bdba_          82 TLIPNAG   88 (276)
T ss_dssp             EEECCCC
T ss_pred             ccccccc
Confidence            9999987

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.82  E-value=0.01  Score=45.89  Aligned_cols=93  Identities=17%  Similarity=0.094  Sum_probs=61.6

Q ss_pred             CEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEE--------ecCCCcccHHHHHHHHHHHhCCC
Q 020768          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV--------KVSTNLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi--------~~~~~~~~~~~~~~~~~~~~~~~  254 (321)
                      .++.|+|+|.+|++.+..+...|. .|.+.++++++.+.+++.+.....        .......+..+.        -..
T Consensus         2 k~iaIiGaG~~G~~~A~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~--------~~~   72 (184)
T d1bg6a2           2 KTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLA--------VKD   72 (184)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHH--------HTT
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhH--------hcC
Confidence            689999999999999999999999 688999999999888876632110        000001122221        146


Q ss_pred             ccEEEEcCCCHH---HHHHHHHHcccCCEEEEE
Q 020768          255 IDVSFDCAGFNK---TMSTALSATRAGGKVCLV  284 (321)
Q Consensus       255 ~d~vid~~g~~~---~~~~~~~~l~~~G~~v~~  284 (321)
                      .|++|-++....   .++.+...+.++..++..
T Consensus        73 aD~iii~v~~~~~~~~~~~i~~~l~~~~~iv~~  105 (184)
T d1bg6a2          73 ADVILIVVPAIHHASIAANIASYISEGQLIILN  105 (184)
T ss_dssp             CSEEEECSCGGGHHHHHHHHGGGCCTTCEEEES
T ss_pred             CCEEEEEEchhHHHHHHHHhhhccCCCCEEEEe
Confidence            899999998753   233344555666655443

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.81  E-value=0.0041  Score=52.06  Aligned_cols=82  Identities=22%  Similarity=0.251  Sum_probs=55.1

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCC--eE--EecC-CCcccHHHHHHHHHHH
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGAD--NI--VKVS-TNLQDIAEEVEKIQKA  250 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~--~v--i~~~-~~~~~~~~~~~~~~~~  250 (321)
                      .|+++||+|+ +++|...++.+...|+ +|+.+++++++.+.+    ++.+..  .+  +..+ .+..+..+.+.+..+.
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK   81 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            4889999998 9999999999999999 688889998776543    334432  22  2222 1223334444444433


Q ss_pred             hCCCccEEEEcCCC
Q 020768          251 MGTGIDVSFDCAGF  264 (321)
Q Consensus       251 ~~~~~d~vid~~g~  264 (321)
                       .+.+|+++++.|.
T Consensus        82 -~G~iDilVnnAG~   94 (274)
T d1xhla_          82 -FGKIDILVNNAGA   94 (274)
T ss_dssp             -HSCCCEEEECCCC
T ss_pred             -cCCceEEEeeccc
Confidence             3579999999874

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.80  E-value=0.0046  Score=47.80  Aligned_cols=129  Identities=16%  Similarity=0.079  Sum_probs=74.3

Q ss_pred             HHHHHcC-CCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCC-eEEecCCCcccHHHHHHHHH
Q 020768          172 HACRRAN-IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGAD-NIVKVSTNLQDIAEEVEKIQ  248 (321)
Q Consensus       172 ~~l~~~~-~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~-~vi~~~~~~~~~~~~~~~~~  248 (321)
                      ++++..+ ...|++|||+|+|+.+.+++..+..+|. .+.++.++.+|.+.+ +.+... .+......  +         
T Consensus         7 ~~l~~~~~~~~~k~vlIlGaGGaarai~~al~~~g~-~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~--~---------   74 (170)
T d1nyta1           7 SDLERLSFIRPGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALSMD--E---------   74 (170)
T ss_dssp             HHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECCSG--G---------
T ss_pred             HHHHHcCCCCCCCEEEEECCcHHHHHHHHHhcccce-EEEeccchHHHHHHHHHHHhhcccccccccc--c---------
Confidence            3455444 3578999999999999999999999998 588888888876654 444321 11111110  0         


Q ss_pred             HHhCCCccEEEEcCCCHHH---HHHHHHHcccCCEEEEEcCCCCCccccchhhhccce--EEEEeehhHHH
Q 020768          249 KAMGTGIDVSFDCAGFNKT---MSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYL--IYSFLFHFFLI  314 (321)
Q Consensus       249 ~~~~~~~d~vid~~g~~~~---~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~--~i~g~~~~~~~  314 (321)
                       .....+|++|+|+.-.-.   ...-.+.++++..++.+-+...+.+ =+.....++.  ++-|.-|...+
T Consensus        75 -~~~~~~dliIN~Tp~G~~~~~~~~~~~~~~~~~~v~D~vY~P~~T~-ll~~A~~~G~~~~i~Gl~MLi~Q  143 (170)
T d1nyta1          75 -LEGHEFDLIINATSSGISGDIPAIPSSLIHPGIYCYDMFYQKGKTP-FLAWCEQRGSKRNADGLGMLVAQ  143 (170)
T ss_dssp             -GTTCCCSEEEECCSCGGGTCCCCCCGGGCCTTCEEEESCCCSSCCH-HHHHHHHTTCCEEECTHHHHHHH
T ss_pred             -ccccccceeecccccCcccCCCCCcHHHhccCcEEEEeecCCCCCH-HHHHHHHcCCCcccCCHHHHHHH
Confidence             113568999999865311   0111345666666666554432221 1222334443  34466665443

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.80  E-value=0.011  Score=45.07  Aligned_cols=108  Identities=12%  Similarity=0.060  Sum_probs=72.9

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCC
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  263 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  263 (321)
                      +|.|+|.|.+|...+.-+...|+ .|++.++++++.+.+++.+....       .+..+..        ...|++|-|+.
T Consensus         2 kIgiIGlG~MG~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~~-------~~~~e~~--------~~~d~ii~~v~   65 (161)
T d1vpda2           2 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAETA-------STAKAIA--------EQCDVIITMLP   65 (161)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC-------SSHHHHH--------HHCSEEEECCS
T ss_pred             EEEEEehhHHHHHHHHHHHHCCC-eEEEEeCCcchhHHHHHhhhhhc-------ccHHHHH--------hCCCeEEEEcC
Confidence            58899999999998888888899 68999999999998888776421       1112222        23689999988


Q ss_pred             CHHHHHHH-------HHHcccCCEEEEEcCCCCCccccchh-hhccceEEEE
Q 020768          264 FNKTMSTA-------LSATRAGGKVCLVGMGHLEMTVPLTP-AAARYLIYSF  307 (321)
Q Consensus       264 ~~~~~~~~-------~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~k~~~i~g  307 (321)
                      ++...+..       ...++++..++..+...+........ +..+++++..
T Consensus        66 ~~~~v~~v~~~~~~~~~~~~~g~iiid~sT~~p~~~~~~~~~~~~~g~~~vd  117 (161)
T d1vpda2          66 NSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLD  117 (161)
T ss_dssp             SHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred             CHHHHHHHHhCCcchhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCceec
Confidence            77665554       34556777777777655444344433 3444555543

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=96.77  E-value=0.0094  Score=48.73  Aligned_cols=105  Identities=17%  Similarity=0.182  Sum_probs=66.7

Q ss_pred             EEEEEcC-ChhHHHHHHHHHHcCCC------eEEEEeCChhHHHHHH----HcCCCe-EEecCC-CcccHHHHHHHHHHH
Q 020768          184 NVLIMGA-GPIGLVTMLGARAFGAP------RIVIVDVDDYRLSVAK----ELGADN-IVKVST-NLQDIAEEVEKIQKA  250 (321)
Q Consensus       184 ~vlI~Ga-g~vG~~a~qla~~~g~~------~vv~v~~~~~~~~~~~----~~g~~~-vi~~~~-~~~~~~~~~~~~~~~  250 (321)
                      .|||+|+ +++|...+..+...|++      .++.++++.++.+.+.    +.|... .+..+- +.++..+.+.++.+.
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER   82 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4688998 99999999888888885      3777888887765442    334322 222221 223333444444333


Q ss_pred             hCCCccEEEEcCCCHH-------------------------HHHHHHHHcc--cCCEEEEEcCCCC
Q 020768          251 MGTGIDVSFDCAGFNK-------------------------TMSTALSATR--AGGKVCLVGMGHL  289 (321)
Q Consensus       251 ~~~~~d~vid~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~  289 (321)
                       .+++|+++++.|...                         ..+.++..++  .+|+++.+++...
T Consensus        83 -~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~  147 (240)
T d2bd0a1          83 -YGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAA  147 (240)
T ss_dssp             -TSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             -cCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhh
Confidence             467999999988631                         2455666663  4689999986543

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.75  E-value=0.0029  Score=52.91  Aligned_cols=82  Identities=23%  Similarity=0.267  Sum_probs=55.0

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCC--eE--EecCC-CcccHHHHHHHHHHH
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGAD--NI--VKVST-NLQDIAEEVEKIQKA  250 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~--~v--i~~~~-~~~~~~~~~~~~~~~  250 (321)
                      .|+++||+|+ +++|...+..+...|+ .|+.+++++++.+.+.    +.+..  .+  +..+- +..+..+.+.+..+.
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~   82 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   82 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            4788999998 9999999999999999 6888999988766443    23321  12  22221 223333444444333


Q ss_pred             hCCCccEEEEcCCC
Q 020768          251 MGTGIDVSFDCAGF  264 (321)
Q Consensus       251 ~~~~~d~vid~~g~  264 (321)
                       .+++|++++++|.
T Consensus        83 -~g~iDilvnnAG~   95 (272)
T d1xkqa_          83 -FGKIDVLVNNAGA   95 (272)
T ss_dssp             -HSCCCEEEECCCC
T ss_pred             -hCCceEEEeCCcc
Confidence             3579999999875

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.75  E-value=0.0056  Score=51.87  Aligned_cols=83  Identities=20%  Similarity=0.238  Sum_probs=54.7

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHc--------CCCeE-EecCC-CcccHHHHHHHHH
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL--------GADNI-VKVST-NLQDIAEEVEKIQ  248 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~--------g~~~v-i~~~~-~~~~~~~~~~~~~  248 (321)
                      .|+++||+|+ +++|...++.+...|+ .|++++++.++.+.+ +++        +.... +..+- +.++..+.+.+..
T Consensus        11 ~gKvalITGas~GIG~aia~~la~~Ga-~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   89 (297)
T d1yxma1          11 QGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   89 (297)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHH
Confidence            5889999998 9999999999999999 688888988776533 222        22211 11111 2233344444443


Q ss_pred             HHhCCCccEEEEcCCCH
Q 020768          249 KAMGTGIDVSFDCAGFN  265 (321)
Q Consensus       249 ~~~~~~~d~vid~~g~~  265 (321)
                      +. .+++|++|++.|..
T Consensus        90 ~~-~G~iDiLVnnAg~~  105 (297)
T d1yxma1          90 DT-FGKINFLVNNGGGQ  105 (297)
T ss_dssp             HH-HSCCCEEEECCCCC
T ss_pred             HH-hCCeEEEEeecccc
Confidence            33 35799999998853

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=96.75  E-value=0.0042  Score=51.51  Aligned_cols=82  Identities=20%  Similarity=0.270  Sum_probs=54.8

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHH-----HHHHcCCCeE-EecCC-CcccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-----VAKELGADNI-VKVST-NLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~-----~~~~~g~~~v-i~~~~-~~~~~~~~~~~~~~~~~  252 (321)
                      .|+++||+|+ +++|...++.+...|+ .|+.++++.++.+     +.++.|.... +..+- +.++..+.+.+..+. .
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~-~   85 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD-L   85 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH-h
Confidence            4789999998 9999999999999999 6888888766543     2344565432 22221 223334444444333 4


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      +++|+++++.|.
T Consensus        86 g~iDilVnnAg~   97 (260)
T d1h5qa_          86 GPISGLIANAGV   97 (260)
T ss_dssp             CSEEEEEECCCC
T ss_pred             CCCcEecccccc
Confidence            689999999874

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=96.75  E-value=0.0072  Score=49.57  Aligned_cols=103  Identities=17%  Similarity=0.200  Sum_probs=64.6

Q ss_pred             EEEEEcC-ChhHHHHHHHHHHcCCCeEEEE-eCChhHHHH----HHHcCCCe-EEecCC-CcccHHHHHHHHHHHhCCCc
Q 020768          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIV-DVDDYRLSV----AKELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI  255 (321)
Q Consensus       184 ~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v-~~~~~~~~~----~~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~~  255 (321)
                      .+||+|+ +++|...++.+...|+ +|+.. .+++++.+.    +++.|... .+..+- +.++..+.+.+..+. .+++
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~i   80 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDA-WGTI   80 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHH-SSCC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHH-cCCC
Confidence            5788888 9999999999999999 45554 455554443    33455432 122221 223333344444333 4679


Q ss_pred             cEEEEcCCCHH-------------------------HHHHHHHHc--ccCCEEEEEcCCC
Q 020768          256 DVSFDCAGFNK-------------------------TMSTALSAT--RAGGKVCLVGMGH  288 (321)
Q Consensus       256 d~vid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~  288 (321)
                      |+++++.|...                         ..+.++..+  +.+|+++.+++..
T Consensus        81 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~  140 (244)
T d1edoa_          81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVV  140 (244)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTH
T ss_pred             CccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChh
Confidence            99999988641                         345566666  4579999998653

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=96.71  E-value=0.0043  Score=51.57  Aligned_cols=83  Identities=22%  Similarity=0.232  Sum_probs=53.6

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChh-HH----HHHHHcCCCeE-EecCC-CcccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY-RL----SVAKELGADNI-VKVST-NLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~-~~----~~~~~~g~~~v-i~~~~-~~~~~~~~~~~~~~~~~  252 (321)
                      .|+++||+|+ +++|...++.+...|+ +|+.++++.+ +.    +.+++.|.+.. +..+- +..+..+.+.+..+. .
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~-~   83 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE-F   83 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-h
Confidence            4789999998 9999999999999999 6777777643 32    23445664322 22221 223333344444333 3


Q ss_pred             CCccEEEEcCCCH
Q 020768          253 TGIDVSFDCAGFN  265 (321)
Q Consensus       253 ~~~d~vid~~g~~  265 (321)
                      +++|+++++.|..
T Consensus        84 G~iDiLVnnAG~~   96 (261)
T d1geea_          84 GKLDVMINNAGLE   96 (261)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCCCEeeccceec
Confidence            5799999998864

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.60  E-value=0.0045  Score=51.49  Aligned_cols=82  Identities=22%  Similarity=0.231  Sum_probs=54.0

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCC--eE--EecCC-CcccHHHHHHHHHHH
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGAD--NI--VKVST-NLQDIAEEVEKIQKA  250 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~--~v--i~~~~-~~~~~~~~~~~~~~~  250 (321)
                      .|+.+||+|+ +++|...++.+...|+ .|+.+++++++.+.+.    +.+..  .+  +..+- +..+..+.+.+..+.
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   82 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            5788999998 9999999999999999 6888899987765432    33322  12  21121 223333344444332


Q ss_pred             hCCCccEEEEcCCC
Q 020768          251 MGTGIDVSFDCAGF  264 (321)
Q Consensus       251 ~~~~~d~vid~~g~  264 (321)
                       .+++|+++++.|.
T Consensus        83 -~g~iDilvnnAG~   95 (264)
T d1spxa_          83 -FGKLDILVNNAGA   95 (264)
T ss_dssp             -HSCCCEEEECCC-
T ss_pred             -hCCCCEeeccccc
Confidence             3679999999874

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.59  E-value=0.012  Score=43.11  Aligned_cols=75  Identities=20%  Similarity=0.272  Sum_probs=54.5

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH-cCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcC
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  262 (321)
                      +|+|.|+|.+|...++.+...|. .|++++.++++.+.+++ ++.. ++.-+..+   .+.+++   .+-..+|.++-++
T Consensus         2 ~IvI~G~G~~G~~la~~L~~~g~-~v~vid~d~~~~~~~~~~~~~~-vi~Gd~~~---~~~l~~---~~i~~a~~vv~~t   73 (132)
T d1lssa_           2 YIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDAL-VINGDCTK---IKTLED---AGIEDADMYIAVT   73 (132)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSE-EEESCTTS---HHHHHH---TTTTTCSEEEECC
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-CcceecCChhhhhhhhhhhhhh-hccCcccc---hhhhhh---cChhhhhhhcccC
Confidence            68999999999999999999998 69999999999887764 5654 33322222   222322   2345789999998


Q ss_pred             CCHH
Q 020768          263 GFNK  266 (321)
Q Consensus       263 g~~~  266 (321)
                      .+++
T Consensus        74 ~~d~   77 (132)
T d1lssa_          74 GKEE   77 (132)
T ss_dssp             SCHH
T ss_pred             CcHH
Confidence            8753

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.59  E-value=0.0064  Score=49.51  Aligned_cols=74  Identities=22%  Similarity=0.217  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      .|+++||+|+ +++|...++.+...|+ .|+.+++++++.   ++.+...+. .+- ..+..    .+.+. -+.+|+++
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga-~V~~~~r~~~~l---~~~~~~~~~-~Dv-~~~~~----~~~~~-~g~iD~lV   71 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEELL---KRSGHRYVV-CDL-RKDLD----LLFEK-VKEVDILV   71 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHH---HHTCSEEEE-CCT-TTCHH----HHHHH-SCCCSEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHH---HhcCCcEEE-cch-HHHHH----HHHHH-hCCCcEEE
Confidence            4789999998 9999999999999999 688888877654   455543322 111 12222    22222 35799999


Q ss_pred             EcCCCH
Q 020768          260 DCAGFN  265 (321)
Q Consensus       260 d~~g~~  265 (321)
                      +++|..
T Consensus        72 nnAG~~   77 (234)
T d1o5ia_          72 LNAGGP   77 (234)
T ss_dssp             ECCCCC
T ss_pred             eccccc
Confidence            998854

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=96.56  E-value=0.011  Score=48.81  Aligned_cols=80  Identities=28%  Similarity=0.362  Sum_probs=52.8

Q ss_pred             EEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCeE-EecCC-CcccHHHHHHHHHHHhCCCcc
Q 020768          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNI-VKVST-NLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       184 ~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~v-i~~~~-~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .+||+|+ +++|...+..+...|+ .|+.+++++++.+.+    ++.|.... +..+- +.++..+.+.+..+. .+++|
T Consensus         3 ValITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~iD   80 (255)
T d1gega_           3 VALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKT-LGGFD   80 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH-TTCCC
T ss_pred             EEEEcCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH-hCCcc
Confidence            3588998 9999999999889999 688889998776543    34554332 22221 223333344444332 46799


Q ss_pred             EEEEcCCCH
Q 020768          257 VSFDCAGFN  265 (321)
Q Consensus       257 ~vid~~g~~  265 (321)
                      ++++++|..
T Consensus        81 ilVnnAG~~   89 (255)
T d1gega_          81 VIVNNAGVA   89 (255)
T ss_dssp             EEEECCCCC
T ss_pred             EEEeccccc
Confidence            999998753

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=96.56  E-value=0.0041  Score=50.95  Aligned_cols=101  Identities=26%  Similarity=0.300  Sum_probs=68.8

Q ss_pred             HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHH
Q 020768          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKA  250 (321)
Q Consensus       175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~~  250 (321)
                      +.++++||++||=+|+|. |..+..+++..|+ .|++++.+++-.+.+++    .|...-+.+...  +..+    +  .
T Consensus        27 ~~~~l~pg~~VLDiGCG~-G~~~~~la~~~~~-~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~--d~~~----~--~   96 (245)
T d1nkva_          27 RVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHN--DAAG----Y--V   96 (245)
T ss_dssp             HHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES--CCTT----C--C
T ss_pred             HHcCCCCCCEEEEEcCCC-CHHHHHHHHhcCC-EEEEEecccchhhHHHHHHHHhhccccchhhhh--HHhh----c--c
Confidence            678999999999899854 4567778888887 79999999887776554    465421111111  1111    1  1


Q ss_pred             hCCCccEEEEc-----C-CCHHHHHHHHHHcccCCEEEEEc
Q 020768          251 MGTGIDVSFDC-----A-GFNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       251 ~~~~~d~vid~-----~-g~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      ..+.||+|+-.     . .-...+..+.+.|+|||+++..-
T Consensus        97 ~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i~~  137 (245)
T d1nkva_          97 ANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  137 (245)
T ss_dssp             CSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             ccCceeEEEEEehhhccCCHHHHHHHHHHHcCcCcEEEEEe
Confidence            24679998852     1 12467888999999999988753

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.55  E-value=0.025  Score=42.42  Aligned_cols=83  Identities=23%  Similarity=0.286  Sum_probs=57.0

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-HcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcC
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  262 (321)
                      +|.++|+|.+|.+.++-+...|...+++.++++++.+.+. ++|....-+.    +.            -...|+||-|+
T Consensus         2 kI~fIG~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~~~~----~~------------v~~~Div~lav   65 (152)
T d1yqga2           2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATL----PE------------LHSDDVLILAV   65 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSC----CC------------CCTTSEEEECS
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhccccccccc----cc------------ccccceEEEec
Confidence            5888999999998777444445448999999998887665 5675432111    11            12469999988


Q ss_pred             CCHHHHHHHHHHcccCCEEEE
Q 020768          263 GFNKTMSTALSATRAGGKVCL  283 (321)
Q Consensus       263 g~~~~~~~~~~~l~~~G~~v~  283 (321)
                      - +..+...++-+++.++++.
T Consensus        66 k-P~~~~~v~~~l~~~~~~vi   85 (152)
T d1yqga2          66 K-PQDMEAACKNIRTNGALVL   85 (152)
T ss_dssp             C-HHHHHHHHTTCCCTTCEEE
T ss_pred             C-HHHHHHhHHHHhhcccEEe
Confidence            7 6677787777777666543

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.54  E-value=0.0016  Score=51.93  Aligned_cols=96  Identities=26%  Similarity=0.315  Sum_probs=62.8

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      .++|+|+|+ |.+|...+..+...|. .|.++.+++++.......++. ++.-+  ..+.. .+.+..    .++|+||.
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~-~~~gD--~~d~~-~l~~al----~~~d~vi~   73 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPAH-VVVGD--VLQAA-DVDKTV----AGQDAVIV   73 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCSE-EEESC--TTSHH-HHHHHH----TTCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEEcChhhcccccccccc-ccccc--ccchh-hHHHHh----cCCCEEEE
Confidence            478999999 9999999998888998 688888888875543333443 33322  22322 233321    46899999


Q ss_pred             cCCCH----------HHHHHHHHHcccCC--EEEEEcC
Q 020768          261 CAGFN----------KTMSTALSATRAGG--KVCLVGM  286 (321)
Q Consensus       261 ~~g~~----------~~~~~~~~~l~~~G--~~v~~g~  286 (321)
                      ++|..          .....+++.++..|  +++.++.
T Consensus        74 ~~g~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss  111 (205)
T d1hdoa_          74 LLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS  111 (205)
T ss_dssp             CCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             EeccCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEee
Confidence            99853          12335566665554  7888764

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.53  E-value=0.02  Score=43.77  Aligned_cols=45  Identities=33%  Similarity=0.387  Sum_probs=39.4

Q ss_pred             CEEEEEcCChhHHHHHHHHHHcCCC-eEEEEeCChhHHHHHHHcCC
Q 020768          183 TNVLIMGAGPIGLVTMLGARAFGAP-RIVIVDVDDYRLSVAKELGA  227 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~g~~-~vv~v~~~~~~~~~~~~~g~  227 (321)
                      ++|+|+|+|.+|...+.-++..|.. .|++.+.+++.++.+++.+.
T Consensus         2 k~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~   47 (171)
T d2g5ca2           2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGI   47 (171)
T ss_dssp             CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTS
T ss_pred             CEEEEEccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhc
Confidence            3699999999999999888888853 68899999999999999885

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.51  E-value=0.012  Score=44.78  Aligned_cols=103  Identities=16%  Similarity=0.241  Sum_probs=74.9

Q ss_pred             cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      ..+-.|++++|.|-|-+|.-.++.++.+|+ +|++++.++-+.-.+..-|... ..           +.+.    -...|
T Consensus        19 ~~~l~Gk~v~V~GyG~iG~g~A~~~rg~G~-~V~v~e~dp~~al~A~~dG~~v-~~-----------~~~a----~~~ad   81 (163)
T d1li4a1          19 DVMIAGKVAVVAGYGDVGKGCAQALRGFGA-RVIITEIDPINALQAAMEGYEV-TT-----------MDEA----CQEGN   81 (163)
T ss_dssp             CCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE-CC-----------HHHH----TTTCS
T ss_pred             CceecCCEEEEeccccccHHHHHHHHhCCC-eeEeeecccchhHHhhcCceEe-ee-----------hhhh----hhhcc
Confidence            345689999999999999999999999999 7999999886655555445432 11           1111    24579


Q ss_pred             EEEEcCCCHH-HHHHHHHHcccCCEEEEEcCCCCCccccchhh
Q 020768          257 VSFDCAGFNK-TMSTALSATRAGGKVCLVGMGHLEMTVPLTPA  298 (321)
Q Consensus       257 ~vid~~g~~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~  298 (321)
                      +++-++|+.. .-..-++.|+++..+..+|...  .++|+..|
T Consensus        82 ivvtaTGn~~vI~~eh~~~MKdgaIL~N~Ghfd--~EId~~~L  122 (163)
T d1li4a1          82 IFVTTTGCIDIILGRHFEQMKDDAIVCNIGHFD--VEIDVKWL  122 (163)
T ss_dssp             EEEECSSCSCSBCHHHHTTCCTTEEEEECSSST--TSBCHHHH
T ss_pred             EEEecCCCccchhHHHHHhccCCeEEEEecccc--ceecHHHH
Confidence            9999999854 3347788999998888888554  35555444

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=96.49  E-value=0.0069  Score=47.30  Aligned_cols=110  Identities=14%  Similarity=0.139  Sum_probs=67.2

Q ss_pred             HHHHHcCC-CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHH----HHHcC--CCe---EEecCCCcccHH
Q 020768          172 HACRRANI-GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELG--ADN---IVKVSTNLQDIA  241 (321)
Q Consensus       172 ~~l~~~~~-~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~----~~~~g--~~~---vi~~~~~~~~~~  241 (321)
                      ++++..+. -.+.+|+|+|+|+.+.+++..+...|.+.+.++.+++++.+.    +++++  ...   ..++.    +..
T Consensus         7 ~~l~~~~~~l~~k~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~   82 (182)
T d1vi2a1           7 RAIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLA----DQQ   82 (182)
T ss_dssp             HHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETT----CHH
T ss_pred             HHHHHcCCCcCCCEEEEECCcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecc----ccc
Confidence            34554443 257899999999999999999999999889898888765443    33332  111   12221    222


Q ss_pred             HHHHHHHHHhCCCccEEEEcCCCHH------HHHHHHHHcccCCEEEEEcCCCCC
Q 020768          242 EEVEKIQKAMGTGIDVSFDCAGFNK------TMSTALSATRAGGKVCLVGMGHLE  290 (321)
Q Consensus       242 ~~~~~~~~~~~~~~d~vid~~g~~~------~~~~~~~~l~~~G~~v~~g~~~~~  290 (321)
                      +....+     ..+|++|+|++-..      .+..-...++++..++.+-+...+
T Consensus        83 ~~~~~~-----~~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~Y~p~~  132 (182)
T d1vi2a1          83 AFAEAL-----ASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHM  132 (182)
T ss_dssp             HHHHHH-----HTCSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECCCSSSS
T ss_pred             chhhhh-----cccceeccccCCccccccchhhhhHHHhhhcchhhHHhhcCccc
Confidence            211111     35899999987321      111123567788888888754433

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.48  E-value=0.00091  Score=55.02  Aligned_cols=102  Identities=16%  Similarity=0.172  Sum_probs=65.6

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      .|+++||+|+ +++|...++.+...|+ .|+.+++++++.+.+..    ...|.. +.++..+.+.++.+. .+++|+++
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~----~~~Dv~-~~~~v~~~~~~~~~~-~g~iDiLV   78 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLFG----VEVDVT-DSDAVDRAFTAVEEH-QGPVEVLV   78 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSEE----EECCTT-CHHHHHHHHHHHHHH-HSSCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCcchhcCceE----EEEecC-CHHHHHHHHHHHHHh-cCCceEEE
Confidence            5789999998 9999999999999999 68888887765432211    112222 223344444444443 35799999


Q ss_pred             EcCCCHH-------------------------HHHHHHHHc--ccCCEEEEEcCCCC
Q 020768          260 DCAGFNK-------------------------TMSTALSAT--RAGGKVCLVGMGHL  289 (321)
Q Consensus       260 d~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~~  289 (321)
                      +++|...                         ..+.++..+  +.+|+++.+++...
T Consensus        79 nnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~  135 (237)
T d1uzma1          79 SNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSG  135 (237)
T ss_dssp             EECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC
T ss_pred             eeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhh
Confidence            9988531                         233444444  34469999986544

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=96.39  E-value=0.016  Score=47.48  Aligned_cols=82  Identities=16%  Similarity=0.214  Sum_probs=51.1

Q ss_pred             CCCEEEEEcC-C--hhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCeEEecCCCc-ccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-G--PIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNIVKVSTNL-QDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g--~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~vi~~~~~~-~~~~~~~~~~~~~~~  252 (321)
                      .|+++||+|+ +  ++|...+..+...|+ .|+.+.++++..+.+    ...+.......+..+ .+..+...+.. ...
T Consensus         4 ~gK~~lITGass~~GIG~aiA~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~   81 (258)
T d1qsga_           4 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELG-KVW   81 (258)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHH-TTC
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhh-hcc
Confidence            5899999988 6  788988888889999 577777776554433    344444443322222 22222222222 235


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      ..+|+.+++.+.
T Consensus        82 ~~~d~~v~~a~~   93 (258)
T d1qsga_          82 PKFDGFVHSIGF   93 (258)
T ss_dssp             SSEEEEEECCCC
T ss_pred             cccceEEEeecc
Confidence            678999988755

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=96.38  E-value=0.0061  Score=49.43  Aligned_cols=94  Identities=21%  Similarity=0.291  Sum_probs=67.7

Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccE
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      .+.++.+||=+|+| .|..+..+++ .|. .|++++.+++..+.+++.+....+..+..  ++.        .....+|+
T Consensus        39 ~~~~~~~vLDiGcG-~G~~~~~l~~-~~~-~v~giD~s~~~l~~a~~~~~~~~~~~~~~--~l~--------~~~~~fD~  105 (246)
T d2avna1          39 YLKNPCRVLDLGGG-TGKWSLFLQE-RGF-EVVLVDPSKEMLEVAREKGVKNVVEAKAE--DLP--------FPSGAFEA  105 (246)
T ss_dssp             HCCSCCEEEEETCT-TCHHHHHHHT-TTC-EEEEEESCHHHHHHHHHHTCSCEEECCTT--SCC--------SCTTCEEE
T ss_pred             hcCCCCEEEEECCC-Cchhcccccc-cce-EEEEeeccccccccccccccccccccccc--ccc--------cccccccc
Confidence            34578899888987 4888888876 477 79999999999999998877665543221  110        11357999


Q ss_pred             EEEcCC------C-HHHHHHHHHHcccCCEEEEE
Q 020768          258 SFDCAG------F-NKTMSTALSATRAGGKVCLV  284 (321)
Q Consensus       258 vid~~g------~-~~~~~~~~~~l~~~G~~v~~  284 (321)
                      |+....      + ...+..+.++|++||.+++.
T Consensus       106 ii~~~~~~~~~~d~~~~l~~i~r~Lk~gG~~ii~  139 (246)
T d2avna1         106 VLALGDVLSYVENKDKAFSEIRRVLVPDGLLIAT  139 (246)
T ss_dssp             EEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             eeeecchhhhhhhHHHHHHHHHhhcCcCcEEEEE
Confidence            986433      2 23577888999999988764

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.32  E-value=0.0072  Score=44.42  Aligned_cols=94  Identities=12%  Similarity=0.180  Sum_probs=62.5

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCC
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  263 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  263 (321)
                      +++|.|.|.+|...++.+...|. .|++++.++++.+.+++.+...++ -+..+.+.   +.+.   +-..+|.++-+++
T Consensus         2 ~~iIiG~G~~G~~la~~L~~~g~-~vvvid~d~~~~~~~~~~~~~~~~-gd~~~~~~---l~~a---~i~~a~~vi~~~~   73 (134)
T d2hmva1           2 QFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATHAVI-ANATEENE---LLSL---GIRNFEYVIVAIG   73 (134)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHHTTTTCSEEEE-CCTTCTTH---HHHH---TGGGCSEEEECCC
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-eEEEecCcHHHHHHHHHhCCccee-eecccchh---hhcc---CCccccEEEEEcC
Confidence            57888999999999999999999 689999999999999888765433 23222232   2222   2245799988888


Q ss_pred             CHHHHHH---HHHHcccCCEEEEEc
Q 020768          264 FNKTMST---ALSATRAGGKVCLVG  285 (321)
Q Consensus       264 ~~~~~~~---~~~~l~~~G~~v~~g  285 (321)
                      ++..-..   ....+.+..+++...
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~iiar~   98 (134)
T d2hmva1          74 ANIQASTLTTLLLKELDIPNIWVKA   98 (134)
T ss_dssp             SCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred             chHHhHHHHHHHHHHcCCCcEEeec
Confidence            6433222   222334445655443

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=96.29  E-value=0.0067  Score=50.12  Aligned_cols=97  Identities=20%  Similarity=0.254  Sum_probs=64.6

Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHhCC
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~~~~~  253 (321)
                      ..++|++||=+|+|. |.+++.+++ .|. +|++++.+++..+.+++    .|....+..    .+..+    .  ....
T Consensus       117 ~~~~g~~VLDiGcGs-G~l~i~aa~-~g~-~V~gvDis~~av~~A~~na~~n~~~~~~~~----~d~~~----~--~~~~  183 (254)
T d2nxca1         117 HLRPGDKVLDLGTGS-GVLAIAAEK-LGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLE----GSLEA----A--LPFG  183 (254)
T ss_dssp             HCCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEE----SCHHH----H--GGGC
T ss_pred             hcCccCEEEEcccch-hHHHHHHHh-cCC-EEEEEECChHHHHHHHHHHHHcCCceeEEe----ccccc----c--cccc
Confidence            357999999999864 666665554 687 69999999988877663    454332211    12221    1  1135


Q ss_pred             CccEEEEcCCCH---HHHHHHHHHcccCCEEEEEcCC
Q 020768          254 GIDVSFDCAGFN---KTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       254 ~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      .+|+|+......   ..++.+.+.|+|||++++.|..
T Consensus       184 ~fD~V~ani~~~~l~~l~~~~~~~LkpGG~lilSgil  220 (254)
T d2nxca1         184 PFDLLVANLYAELHAALAPRYREALVPGGRALLTGIL  220 (254)
T ss_dssp             CEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             ccchhhhccccccHHHHHHHHHHhcCCCcEEEEEecc
Confidence            799999755432   3456777999999999987754

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.21  E-value=0.0021  Score=52.32  Aligned_cols=108  Identities=12%  Similarity=-0.005  Sum_probs=67.5

Q ss_pred             HcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCC-CeEE------------ecCCCcccHH-
Q 020768          176 RANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA-DNIV------------KVSTNLQDIA-  241 (321)
Q Consensus       176 ~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~-~~vi------------~~~~~~~~~~-  241 (321)
                      ...+.++.+||..|||. |..+..+|+ .|+ .|+++|.+++..+.+++... ....            ......-++. 
T Consensus        40 ~l~~~~~~rvLd~GCG~-G~~a~~LA~-~G~-~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  116 (229)
T d2bzga1          40 FLKGKSGLRVFFPLCGK-AVEMKWFAD-RGH-SVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYC  116 (229)
T ss_dssp             HHTTCCSCEEEETTCTT-CTHHHHHHH-TTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEE
T ss_pred             hcCCCCCCEEEEeCCCC-cHHHHHHHh-CCC-cEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEE
Confidence            35678999999999966 777777776 688 79999999999988765322 1110            0000000000 


Q ss_pred             HHHHHHHHHhCCCccEEEEcCCC--------HHHHHHHHHHcccCCEEEEEcC
Q 020768          242 EEVEKIQKAMGTGIDVSFDCAGF--------NKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       242 ~~~~~~~~~~~~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      ..+.++.......+|+|+++.--        ...+..+.++|+|+|++++...
T Consensus       117 ~d~~~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~~  169 (229)
T d2bzga1         117 CSIFDLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQYLLCVL  169 (229)
T ss_dssp             SCGGGGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             cchhhccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcceEEEEEc
Confidence            00111111124568999986421        2456788999999999877763

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=96.21  E-value=0.019  Score=47.45  Aligned_cols=82  Identities=15%  Similarity=0.174  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-C--hhHHHHHHHHHHcCCCeEEEEeCChhHHHH----HHHcCCCeEEecCC-CcccHHHHHHHHHHHhC
Q 020768          181 PETNVLIMGA-G--PIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGADNIVKVST-NLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       181 ~g~~vlI~Ga-g--~vG~~a~qla~~~g~~~vv~v~~~~~~~~~----~~~~g~~~vi~~~~-~~~~~~~~~~~~~~~~~  252 (321)
                      .|+++||+|+ |  ++|.+.++.+...|+ .|+.++++++..+.    ..+.+...+...+. ...+..+.+.+..+ .-
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga-~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~   81 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKK-DL   81 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH-HT
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHH-Hc
Confidence            4899999987 5  799999999999999 67778777543222    23333333332222 22333334444433 24


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      +.+|+++.+.|.
T Consensus        82 g~id~lV~nag~   93 (274)
T d2pd4a1          82 GSLDFIVHSVAF   93 (274)
T ss_dssp             SCEEEEEECCCC
T ss_pred             CCCCeEEeeccc
Confidence            679999998885

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.20  E-value=0.015  Score=46.07  Aligned_cols=106  Identities=24%  Similarity=0.294  Sum_probs=72.7

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      .|.+|+|.|.|.+|..+++++...|+ ++++++.+.++.+....+|.+.+ ..    +++          ....+|+.+=
T Consensus        26 ~gk~v~IqG~G~VG~~~A~~L~~~Ga-kvvv~d~d~~~~~~~~~~g~~~~-~~----~~~----------~~~~~DI~iP   89 (201)
T d1c1da1          26 DGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTAV-AL----EDV----------LSTPCDVFAP   89 (201)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC-CG----GGG----------GGCCCSEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEecchHHHHHHHHhhccccc-Cc----ccc----------ccccceeeec
Confidence            67899999999999999999999998 78999999999998888887542 11    111          2357899987


Q ss_pred             cCCCHHHHHHHHHHcccCCEEEEEcCCCCCcccc-ch-hhhccceEE
Q 020768          261 CAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVP-LT-PAAARYLIY  305 (321)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~-~~~~k~~~i  305 (321)
                      |..+...=....+.++  .+++ ++..+.+...+ .. .|..|++.+
T Consensus        90 cA~~~~I~~~~a~~i~--ak~i-~e~AN~p~~~~~~~~~L~~rgI~~  133 (201)
T d1c1da1          90 CAMGGVITTEVARTLD--CSVV-AGAANNVIADEAASDILHARGILY  133 (201)
T ss_dssp             CSCSCCBCHHHHHHCC--CSEE-CCSCTTCBCSHHHHHHHHHTTCEE
T ss_pred             ccccccccHHHHhhhh--hhee-eccCCCCcchhhHHHHhcccceEE
Confidence            7765433334455553  3444 45444433332 22 367777765

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.18  E-value=0.04  Score=46.99  Aligned_cols=105  Identities=15%  Similarity=0.174  Sum_probs=68.0

Q ss_pred             HHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHc-----------CC--Ce--EEecCCC
Q 020768          172 HACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL-----------GA--DN--IVKVSTN  236 (321)
Q Consensus       172 ~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~-----------g~--~~--vi~~~~~  236 (321)
                      ..++..+++++++||=+|+|. |..+.++|+..++..+++++.+++..+++++.           |.  ..  ++.-+-.
T Consensus       142 ~~~~~~~l~~~~~vlD~GcG~-G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~~  220 (328)
T d1nw3a_         142 QMIDEIKMTDDDLFVDLGSGV-GQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFL  220 (328)
T ss_dssp             HHHHHSCCCTTCEEEEETCTT-SHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCTT
T ss_pred             HHHHHcCCCCCCEEEEcCCCC-CHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECccc
Confidence            446788999999999888754 88888999999988899999998877665432           21  11  2221111


Q ss_pred             cccHHHHHHHHHHHhCCCccEEEEcCC--CH---HHHHHHHHHcccCCEEEEEc
Q 020768          237 LQDIAEEVEKIQKAMGTGIDVSFDCAG--FN---KTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~d~vid~~g--~~---~~~~~~~~~l~~~G~~v~~g  285 (321)
                      ..++.+   .+     ..+|+|+-..-  .+   ..+...++.|++||+++..-
T Consensus       221 ~~~~~~---~~-----~~advi~~~~~~f~~~~~~~l~e~~r~LKpGg~iv~~~  266 (328)
T d1nw3a_         221 SEEWRE---RI-----ANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK  266 (328)
T ss_dssp             SHHHHH---HH-----HHCSEEEECCTTTCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             cccccc---cc-----CcceEEEEcceecchHHHHHHHHHHHhCCCCcEEEEec
Confidence            112221   11     12578774222  12   34567788899999998764

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=96.17  E-value=0.0058  Score=49.21  Aligned_cols=102  Identities=20%  Similarity=0.188  Sum_probs=67.9

Q ss_pred             HHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHH
Q 020768          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQ  248 (321)
Q Consensus       173 ~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~  248 (321)
                      .++.+.++++++||=+|+| .|..+..+++. |. .+++++.+++-.+.++    +.+.+.+-....+..++       .
T Consensus         7 ll~~~~l~~~~rVLDiGcG-~G~~~~~l~~~-~~-~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l-------~   76 (231)
T d1vl5a_           7 LMQIAALKGNEEVLDVATG-GGHVANAFAPF-VK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQM-------P   76 (231)
T ss_dssp             HHHHHTCCSCCEEEEETCT-TCHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CC-------C
T ss_pred             HHHhcCCCCcCEEEEeccc-CcHHHHHHHHh-CC-EEEEEECCHHHHhhhhhcccccccccccccccccccc-------c
Confidence            3577899999999999986 46666666654 65 7999999988776654    34544332111111111       0


Q ss_pred             HHhCCCccEEEEcCC-----C-HHHHHHHHHHcccCCEEEEEc
Q 020768          249 KAMGTGIDVSFDCAG-----F-NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       249 ~~~~~~~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~g  285 (321)
                       ...+.+|+|+-.-.     + ...+..+.++|+|||++++.-
T Consensus        77 -~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~  118 (231)
T d1vl5a_          77 -FTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD  118 (231)
T ss_dssp             -SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             -ccccccccccccccccccCCHHHHHHHHHHhcCCCcEEEEEe
Confidence             01356899986422     2 246789999999999999864

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.05  E-value=0.0011  Score=54.11  Aligned_cols=98  Identities=12%  Similarity=0.104  Sum_probs=62.9

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCC---eEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD---NIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .+|.+||-+|+|. |..+..+++..+. .+++++.+++-.+.+++....   .+....   .+.......   .....+|
T Consensus        52 ~~g~~VLdIGcG~-G~~a~~~a~~~~~-~v~~id~s~~~~~~a~~~~~~~~~~~~~~~---~~~~~~~~~---~~~~~fD  123 (229)
T d1zx0a1          52 SKGGRVLEVGFGM-AIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLK---GLWEDVAPT---LPDGHFD  123 (229)
T ss_dssp             TTCEEEEEECCTT-SHHHHHHHTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEE---SCHHHHGGG---SCTTCEE
T ss_pred             cCCCeEEEeeccc-hHHHHHHHHcCCC-eEEEeCCCHHHHHHHHHHhhhccccccccc---ccccccccc---ccccccc
Confidence            6789999999854 6777788876655 689999999999988764321   111111   122211111   1235688


Q ss_pred             EEE-EcCCCH----------HHHHHHHHHcccCCEEEEEc
Q 020768          257 VSF-DCAGFN----------KTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       257 ~vi-d~~g~~----------~~~~~~~~~l~~~G~~v~~g  285 (321)
                      .++ |.....          ..+..+.+.|+|||+++...
T Consensus       124 ~i~fD~~~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~~~  163 (229)
T d1zx0a1         124 GILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  163 (229)
T ss_dssp             EEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             ceeecccccccccccccCHHHHHHHHHHHcCCCcEEEEEe
Confidence            774 544332          24567889999999998753

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=96.02  E-value=0.015  Score=47.01  Aligned_cols=101  Identities=20%  Similarity=0.198  Sum_probs=66.8

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHH
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      ++.+.++||++||=+|+|. |..+..+++. +. .++++|-+++-.+.++    +.+.+.+.....+..++.        
T Consensus         9 ~~~~~~~~~~rILDiGcGt-G~~~~~la~~-~~-~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~--------   77 (234)
T d1xxla_           9 IKTAECRAEHRVLDIGAGA-GHTALAFSPY-VQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP--------   77 (234)
T ss_dssp             HHHHTCCTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC--------
T ss_pred             HHHhCCCCCCEEEEeCCcC-cHHHHHHHHh-CC-eEEEEeCChhhhhhhhhhhccccccccccccccccccc--------
Confidence            3678999999999999855 6677777764 55 7999999987766554    344443222111111110        


Q ss_pred             HhCCCccEEEEcCC-----C-HHHHHHHHHHcccCCEEEEEc
Q 020768          250 AMGTGIDVSFDCAG-----F-NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       250 ~~~~~~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      ...+.||+|+..-.     + ...++.+.+.|+|+|++++.-
T Consensus        78 ~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~~~~~~  119 (234)
T d1xxla_          78 FPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVD  119 (234)
T ss_dssp             SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccccccceeeeeceeecccCHHHHHHHHHHeeCCCcEEEEEE
Confidence            01356999886322     1 356889999999999988863

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.01  E-value=0.038  Score=41.89  Aligned_cols=108  Identities=15%  Similarity=0.103  Sum_probs=66.1

Q ss_pred             CEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcC
Q 020768          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  262 (321)
                      .+|.++|.|.+|...+.-+...|+ .|.+.++++++.+.+.+.+.....       +..+    .    -...|+++.|+
T Consensus         2 ~kIg~IGlG~MG~~iA~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~-------~~~e----~----~~~~diii~~v   65 (162)
T d3cuma2           2 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAAGASAAR-------SARD----A----VQGADVVISML   65 (162)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEECS-------SHHH----H----HTSCSEEEECC
T ss_pred             CEEEEEEEHHHHHHHHHHHHHCCC-eEEEEECchhhhhhhhhhhccccc-------hhhh----h----ccccCeeeecc
Confidence            468899999999987777777898 689999999999888887754321       1111    1    13457777777


Q ss_pred             CCHHHHHHH-------HHHcccCCEEEEEcCCCCCccccchh-hhccceEEE
Q 020768          263 GFNKTMSTA-------LSATRAGGKVCLVGMGHLEMTVPLTP-AAARYLIYS  306 (321)
Q Consensus       263 g~~~~~~~~-------~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~k~~~i~  306 (321)
                      .........       ...+.++-.++..+...++....... +..+++.+.
T Consensus        66 ~~~~~~~~v~~~~~~~~~~l~~g~iiid~st~~p~~~~~~~~~~~~~gi~~~  117 (162)
T d3cuma2          66 PASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAML  117 (162)
T ss_dssp             SCHHHHHHHHHSTTCHHHHSCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred             cchhhHHHHHhccccccccCCCCCEEEECCCCCHHHHHHHHHHHHHCCCcEE
Confidence            765544433       23455555666555544433333333 233444444

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.98  E-value=0.06  Score=47.23  Aligned_cols=110  Identities=15%  Similarity=0.148  Sum_probs=70.8

Q ss_pred             HHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHc-----------CC--C-eEEecCC
Q 020768          170 GLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL-----------GA--D-NIVKVST  235 (321)
Q Consensus       170 a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~-----------g~--~-~vi~~~~  235 (321)
                      ....++..++++|+++|=+|+| .|..++++|+..|+..+++++-++...+++++.           +.  . .......
T Consensus       205 i~~Il~~l~Lkpgd~fLDLGCG-~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~~  283 (406)
T d1u2za_         205 LSDVYQQCQLKKGDTFMDLGSG-VGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKK  283 (406)
T ss_dssp             HHHHHHHTTCCTTCEEEEESCT-TSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESS
T ss_pred             HHHHHHHhCCCCCCEEEeCCCC-CcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeeee
Confidence            4456788999999998877875 489999999999987899999998877776542           11  1 1111111


Q ss_pred             CcccHHHHHHHHHHHhCCCccEEEEcCC--C---HHHHHHHHHHcccCCEEEEEc
Q 020768          236 NLQDIAEEVEKIQKAMGTGIDVSFDCAG--F---NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~d~vid~~g--~---~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      ...+. +.....    -..+|+++-...  .   ...+..+++.|++||+++..-
T Consensus       284 ~f~~~-~~~d~~----~~~adVV~inn~~f~~~l~~~L~ei~r~LKPGGrIVs~~  333 (406)
T d1u2za_         284 SFVDN-NRVAEL----IPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK  333 (406)
T ss_dssp             CSTTC-HHHHHH----GGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             chhhc-cccccc----cccceEEEEecccCchHHHHHHHHHHHhcCCCcEEEEec
Confidence            11110 111111    235788875321  1   235678889999999998853

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.95  E-value=0.029  Score=43.17  Aligned_cols=105  Identities=17%  Similarity=0.153  Sum_probs=65.8

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEE-eCC-hhHHHHHHHcCCCeEEecCCCcccHHHHHH----HHHHHhCCCccE
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIV-DVD-DYRLSVAKELGADNIVKVSTNLQDIAEEVE----KIQKAMGTGIDV  257 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v-~~~-~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~----~~~~~~~~~~d~  257 (321)
                      +|.|.|-|-+|...++.+....--.++++ +.+ .+....+.+++.+......+....+.+.-.    .+.. ...++|+
T Consensus         4 rIaINGfGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~vDv   82 (172)
T d2czca2           4 KVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLND-LLEKVDI   82 (172)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHH-HHTTCSE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhh-hhccCCE
Confidence            68899999999988887765432134444 333 345566777776654321111111111000    0000 0137999


Q ss_pred             EEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC
Q 020768          258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHL  289 (321)
Q Consensus       258 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  289 (321)
                      |+||+|.-...+.+-..+..|-+.+..+.+..
T Consensus        83 ViEcTG~f~~~~~~~~hl~~G~k~Vi~s~~~~  114 (172)
T d2czca2          83 IVDATPGGIGAKNKPLYEKAGVKAIFQGGEKA  114 (172)
T ss_dssp             EEECCSTTHHHHHHHHHHHHTCEEEECTTSCG
T ss_pred             EEECCCCCCCHHHHHHHHHcCCCEEEECCCCc
Confidence            99999998888888899999999999886544

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=95.95  E-value=0.013  Score=44.49  Aligned_cols=102  Identities=20%  Similarity=0.217  Sum_probs=75.3

Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccE
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      -+-.|++++|.|=|-+|.-+++-++.+|+ +|++++.++-+.-.+..-|.. +..           +.+.    -...|+
T Consensus        19 ~~laGk~vvV~GYG~vGrG~A~~~rg~Ga-~V~V~E~DPi~alqA~mdGf~-v~~-----------~~~a----~~~aDi   81 (163)
T d1v8ba1          19 FLISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGFN-VVT-----------LDEI----VDKGDF   81 (163)
T ss_dssp             CCCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTCE-ECC-----------HHHH----TTTCSE
T ss_pred             ceecCCEEEEecccccchhHHHHHHhCCC-EEEEEecCchhhHHHHhcCCc-cCc-----------hhHc----cccCcE
Confidence            45689999999999999999999999999 799999998665444443432 221           1121    245799


Q ss_pred             EEEcCCCHHH-HHHHHHHcccCCEEEEEcCCCCCccccchhh
Q 020768          258 SFDCAGFNKT-MSTALSATRAGGKVCLVGMGHLEMTVPLTPA  298 (321)
Q Consensus       258 vid~~g~~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~  298 (321)
                      ++-++|+.+. -..-++.++++..+...|-..  .++|+..+
T Consensus        82 ~vTaTGn~~vI~~~h~~~MKdgaIl~N~GHfd--~EIdv~~L  121 (163)
T d1v8ba1          82 FITCTGNVDVIKLEHLLKMKNNAVVGNIGHFD--DEIQVNEL  121 (163)
T ss_dssp             EEECCSSSSSBCHHHHTTCCTTCEEEECSSTT--TSBCHHHH
T ss_pred             EEEcCCCCccccHHHHHHhhCCeEEEeccccc--hhhhhHHH
Confidence            9999999654 446689999999999998544  45555443

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.92  E-value=0.0073  Score=49.03  Aligned_cols=103  Identities=16%  Similarity=0.145  Sum_probs=68.0

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHHHc----CCCeEEecCCCcccHHHHHHHHH
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKEL----GADNIVKVSTNLQDIAEEVEKIQ  248 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~~~----g~~~vi~~~~~~~~~~~~~~~~~  248 (321)
                      ++...++||++||=+|+|. |..+..+++..|. ..|++++.+++..+.+++.    +....+..+....+      .+.
T Consensus        66 l~~l~i~pG~~VLDlGaGs-G~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~------~~~  138 (227)
T d1g8aa_          66 LKNFPIKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPE------EYR  138 (227)
T ss_dssp             CCCCCCCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGG------GGT
T ss_pred             ccccccCCCCEEEEeccCC-CHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCcc------ccc
Confidence            4567899999999999865 7788888888753 3799999999887776543    22222222221111      000


Q ss_pred             HHhCCCccEEEEcCCCH----HHHHHHHHHcccCCEEEEE
Q 020768          249 KAMGTGIDVSFDCAGFN----KTMSTALSATRAGGKVCLV  284 (321)
Q Consensus       249 ~~~~~~~d~vid~~g~~----~~~~~~~~~l~~~G~~v~~  284 (321)
                       .....+|+++......    ..+..+.+.|+++|++++.
T Consensus       139 -~~~~~vD~i~~d~~~~~~~~~~l~~~~~~LkpgG~lvi~  177 (227)
T d1g8aa_         139 -ALVPKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             -TTCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             -ccccceEEEEEEccccchHHHHHHHHHHhcccCCeEEEE
Confidence             0134578888655432    2477888999999998875

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=95.89  E-value=0.076  Score=39.71  Aligned_cols=98  Identities=21%  Similarity=0.227  Sum_probs=66.7

Q ss_pred             CEEEEEcC-ChhHHHHHHHHHHc--CCCeEEEEeCChh---HHHHHHHcCCCeEEecCCCcccH---------------H
Q 020768          183 TNVLIMGA-GPIGLVTMLGARAF--GAPRIVIVDVDDY---RLSVAKELGADNIVKVSTNLQDI---------------A  241 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~~~--g~~~vv~v~~~~~---~~~~~~~~g~~~vi~~~~~~~~~---------------~  241 (321)
                      .+|.|+|+ |.+|..++++.+..  .+ .|++......   -.+.+++|.+..+...+....+.               .
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~~~~~l~~~~~~~~~~v~~g~   81 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRY-QVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGA   81 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGE-EEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSEEEESH
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCc-EEEEEEeCCCHHHHHHHHHhhccccceeccHHHHHHHHHHhhhcccccccCc
Confidence            68999999 99999999999976  45 4665554432   34456789998876543321111               1


Q ss_pred             HHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEE
Q 020768          242 EEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV  284 (321)
Q Consensus       242 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  284 (321)
                      +.+.++   ....+|+++.+..+-..+...+.+++.+-++.+.
T Consensus        82 ~~l~~~---~~~~~D~vv~Ai~G~~GL~~tl~ai~~gk~iaLA  121 (150)
T d1r0ka2          82 DALVEA---AMMGADWTMAAIIGCAGLKATLAAIRKGKTVALA  121 (150)
T ss_dssp             HHHHHH---HTSCCSEEEECCCSGGGHHHHHHHHHTTSEEEEC
T ss_pred             cchhee---cccccceeeeecCchhHHHHHHHHHhcCCEEEEe
Confidence            112221   2346899999988888889999999988775443

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=95.87  E-value=0.022  Score=44.33  Aligned_cols=101  Identities=19%  Similarity=0.248  Sum_probs=66.0

Q ss_pred             HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCC-eEEecCCCcccHHHHHHHHHH
Q 020768          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGAD-NIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~-~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      ....+++|++||=+|+|. |..++.+|+. +. .|++++.+++..+.++    ++|.. .+-...   .+..+..     
T Consensus        27 ~~l~~~~g~~VLDiGcGs-G~~s~~lA~~-~~-~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~---gda~~~~-----   95 (186)
T d1l3ia_          27 CLAEPGKNDVAVDVGCGT-GGVTLELAGR-VR-RVYAIDRNPEAISTTEMNLQRHGLGDNVTLME---GDAPEAL-----   95 (186)
T ss_dssp             HHHCCCTTCEEEEESCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEE---SCHHHHH-----
T ss_pred             HhcCCCCCCEEEEEECCe-Eccccccccc-ce-EEEEecCCHHHHHHHHHHHHHcCCCcceEEEE---Cchhhcc-----
Confidence            557889999999888743 4445556654 33 7999999998877765    46653 332221   1222221     


Q ss_pred             HhCCCccEEEEcCCC---HHHHHHHHHHcccCCEEEEEcC
Q 020768          250 AMGTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       250 ~~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      .....+|.|+-..+.   .+.++.+.+.|+++|+++....
T Consensus        96 ~~~~~~D~v~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~  135 (186)
T d1l3ia_          96 CKIPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTAI  135 (186)
T ss_dssp             TTSCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             cccCCcCEEEEeCccccchHHHHHHHHHhCcCCEEEEEee
Confidence            124678988865433   3467788899999999887653

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=95.84  E-value=0.029  Score=43.15  Aligned_cols=128  Identities=18%  Similarity=0.096  Sum_probs=72.6

Q ss_pred             HHHHcC-CCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCC-CeEEecCCCcccHHHHHHHHHH
Q 020768          173 ACRRAN-IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGA-DNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       173 ~l~~~~-~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~-~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      +++..+ ..++.+|+|+|+|+.+.+++..+...+ ..+.++.++.++.+.+ +.++. ..+.......            
T Consensus         8 ~l~~~~~~~~~k~vlIlGaGGaarai~~aL~~~~-~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~------------   74 (171)
T d1p77a1           8 DLQRLNWLRPNQHVLILGAGGATKGVLLPLLQAQ-QNIVLANRTFSKTKELAERFQPYGNIQAVSMDS------------   74 (171)
T ss_dssp             HHHHTTCCCTTCEEEEECCSHHHHTTHHHHHHTT-CEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG------------
T ss_pred             HHHHcCCCCCCCEEEEECCcHHHHHHHHHHcccC-ceeeeccchHHHHHHHHHHHhhccccchhhhcc------------
Confidence            344433 347889999999999999988887655 5788888998876654 44442 1121111110            


Q ss_pred             HhCCCccEEEEcCCCHH---HHHHHHHHcccCCEEEEEcCCCCCccccchhhhccce-EEE-EeehhHH
Q 020768          250 AMGTGIDVSFDCAGFNK---TMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYL-IYS-FLFHFFL  313 (321)
Q Consensus       250 ~~~~~~d~vid~~g~~~---~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~-~i~-g~~~~~~  313 (321)
                      ..-..+|++|+|++...   ........++++..++.+-...+..+.=+...-.++. ++. |.-|...
T Consensus        75 ~~~~~~diiIN~tp~g~~~~~~~~~~~~~~~~~~~~D~vy~~p~~T~~l~~A~~~g~~~v~~Gl~Ml~~  143 (171)
T d1p77a1          75 IPLQTYDLVINATSAGLSGGTASVDAEILKLGSAFYDMQYAKGTDTPFIALCKSLGLTNVSDGFGMLVA  143 (171)
T ss_dssp             CCCSCCSEEEECCCC-------CCCHHHHHHCSCEEESCCCTTSCCHHHHHHHHTTCCCEECSHHHHHH
T ss_pred             ccccccceeeecccccccccccchhhhhhcccceeeeeeccCcccHHHHHHHHHcCCCcccCcHHHHHH
Confidence            01356899999988631   1112234456677777776543322211222333454 455 6555433

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.76  E-value=0.017  Score=47.14  Aligned_cols=81  Identities=17%  Similarity=0.269  Sum_probs=49.4

Q ss_pred             CEEEEEcC-ChhHHHHHHHHH---HcCCCeEEEEeCChhHHHHHHH---cCCC-eEEecCC-CcccHHHHHHHHHHH-hC
Q 020768          183 TNVLIMGA-GPIGLVTMLGAR---AFGAPRIVIVDVDDYRLSVAKE---LGAD-NIVKVST-NLQDIAEEVEKIQKA-MG  252 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~---~~g~~~vv~v~~~~~~~~~~~~---~g~~-~vi~~~~-~~~~~~~~~~~~~~~-~~  252 (321)
                      ++|||+|+ +++|...++.+.   ..|+ .|+.+.+++++.+.+++   .+.. .++..+- +.++..+....+... ..
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            57999999 999998876553   3577 68888888876554432   2222 2232222 223344444443322 24


Q ss_pred             CCccEEEEcCCC
Q 020768          253 TGIDVSFDCAGF  264 (321)
Q Consensus       253 ~~~d~vid~~g~  264 (321)
                      +++|+++++.|.
T Consensus        82 ~~iDiLvnNAg~   93 (248)
T d1snya_          82 QGLNVLFNNAGI   93 (248)
T ss_dssp             GCCSEEEECCCC
T ss_pred             CCcceEEeeccc
Confidence            679999999874

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.74  E-value=0.013  Score=46.81  Aligned_cols=103  Identities=14%  Similarity=0.063  Sum_probs=65.5

Q ss_pred             HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHH
Q 020768          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKA  250 (321)
Q Consensus       175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~~  250 (321)
                      ....++||++||=+|+|. |..+..+++..+...|++++-+++..+.+++    .+-...+..+......      . ..
T Consensus        50 ~~l~lkpg~~VLDlGcG~-G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~------~-~~  121 (209)
T d1nt2a_          50 HRLKLRGDERVLYLGAAS-GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWK------Y-SG  121 (209)
T ss_dssp             CCCCCCSSCEEEEETCTT-SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGG------T-TT
T ss_pred             ccCCCCCCCEEEEeCCcC-CHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCccc------c-cc
Confidence            347899999999999855 5677778887765589999999988776543    3322222211111110      0 00


Q ss_pred             hCCCccEEEEcCCCH----HHHHHHHHHcccCCEEEEEc
Q 020768          251 MGTGIDVSFDCAGFN----KTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       251 ~~~~~d~vid~~g~~----~~~~~~~~~l~~~G~~v~~g  285 (321)
                      ....+|+++....-.    ..+..+.+.|+++|+++..-
T Consensus       122 ~~~~vd~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  160 (209)
T d1nt2a_         122 IVEKVDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIMV  160 (209)
T ss_dssp             TCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccceEEEEEecccChhhHHHHHHHHHHHhccCCeEEEEE
Confidence            123467776644321    24677889999999998763

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=95.61  E-value=0.011  Score=40.60  Aligned_cols=35  Identities=29%  Similarity=0.267  Sum_probs=30.5

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~  216 (321)
                      .|++|+|+|.|..|+.+++++...|+ .|.+.+.+.
T Consensus         4 ~~K~v~ViGlG~sG~s~a~~L~~~g~-~v~~~D~~~   38 (93)
T d2jfga1           4 QGKNVVIIGLGLTGLSCVDFFLARGV-TPRVMDTRM   38 (93)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHHHTTC-CCEEEESSS
T ss_pred             CCCEEEEEeECHHHHHHHHHHHHCCC-EEEEeeCCc
Confidence            47899999999999999999999999 577777654

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=95.57  E-value=0.036  Score=46.04  Aligned_cols=101  Identities=16%  Similarity=0.186  Sum_probs=67.4

Q ss_pred             HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCe-EEecCCCcccHHHHHHHHHH
Q 020768          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADN-IVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~-vi~~~~~~~~~~~~~~~~~~  249 (321)
                      ....+.+|++||=+|+|. |..+..+++..|+ .|++++.++...+.+++    .|... +-....+..++       . 
T Consensus        61 ~~~~l~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l-------~-  130 (282)
T d2o57a1          61 MTGVLQRQAKGLDLGAGY-GGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEI-------P-  130 (282)
T ss_dssp             HTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSC-------S-
T ss_pred             HhcCCCCCCEEEEeCCCC-cHHHhhhhccCCc-EEEEEeccchhhhhhhcccccccccccccccccccccc-------c-
Confidence            447899999999999863 6677788888888 79999999887666653    44432 21111111111       0 


Q ss_pred             HhCCCccEEEEcC-----CC-HHHHHHHHHHcccCCEEEEEc
Q 020768          250 AMGTGIDVSFDCA-----GF-NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       250 ~~~~~~d~vid~~-----g~-~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      ...+.||+|+-.-     .+ ...+..+.++|+|||++++..
T Consensus       131 ~~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~~~~  172 (282)
T d2o57a1         131 CEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITD  172 (282)
T ss_dssp             SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccccccchhhccchhhhccCHHHHHHHHHHhcCCCcEEEEEE
Confidence            0135689998632     22 246789999999999998875

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.50  E-value=0.052  Score=45.26  Aligned_cols=103  Identities=20%  Similarity=0.218  Sum_probs=57.2

Q ss_pred             EEEEEcC-ChhHHHHHHHHHHcCCCeEEE--EeCChhHH----HHHHHcCC---C-eEEecCCCcccHHHHHHHHHH-Hh
Q 020768          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVI--VDVDDYRL----SVAKELGA---D-NIVKVSTNLQDIAEEVEKIQK-AM  251 (321)
Q Consensus       184 ~vlI~Ga-g~vG~~a~qla~~~g~~~vv~--v~~~~~~~----~~~~~~g~---~-~vi~~~~~~~~~~~~~~~~~~-~~  251 (321)
                      .|||+|+ +++|...+..+...|++.+.+  +.++.++.    +.++++..   . ..+..+-.  +.. .+.++.+ ..
T Consensus         4 VvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~--~~~-~~~~~~~~~~   80 (285)
T d1jtva_           4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVR--DSK-SVAAARERVT   80 (285)
T ss_dssp             EEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTT--CHH-HHHHHHHTCT
T ss_pred             EEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEecccc--chH-hhhhhhhhcc
Confidence            3567798 999999999888889863332  33333322    23344332   2 12222221  222 2222222 22


Q ss_pred             CCCccEEEEcCCCHH-------------------------HHHHHHHHc--ccCCEEEEEcCCCC
Q 020768          252 GTGIDVSFDCAGFNK-------------------------TMSTALSAT--RAGGKVCLVGMGHL  289 (321)
Q Consensus       252 ~~~~d~vid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~~  289 (321)
                      .+.+|+++++.|...                         ..+.++..|  +.+|+++.+++..+
T Consensus        81 ~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g  145 (285)
T d1jtva_          81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGG  145 (285)
T ss_dssp             TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGG
T ss_pred             ccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhh
Confidence            467999999887541                         244555555  33689999986433

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=95.43  E-value=0.042  Score=44.94  Aligned_cols=38  Identities=26%  Similarity=0.392  Sum_probs=32.5

Q ss_pred             CCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCC
Q 020768          178 NIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD  215 (321)
Q Consensus       178 ~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~  215 (321)
                      ..+|+.++||+|+ +++|...+..+...|+++++.+.++
T Consensus         5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~   43 (259)
T d2fr1a1           5 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRS   43 (259)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESS
T ss_pred             ccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence            4688999999998 9999999999988999767777665

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.38  E-value=0.046  Score=42.27  Aligned_cols=93  Identities=13%  Similarity=0.026  Sum_probs=60.5

Q ss_pred             EEEEEcCChhHHHHHHHHHHc-CCCeEEEEeCChhHHH-HHHHcCCCe-EEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          184 NVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLS-VAKELGADN-IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~-g~~~vv~v~~~~~~~~-~~~~~g~~~-vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      ++.|+|+|.+|...++.++.. +++.+.+.+.+.++.+ ++++++... ...+    .++.    ++.+  ...+|+|+-
T Consensus         3 ki~iIG~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~----~~~~----~ll~--~~~iD~v~I   72 (184)
T d1ydwa1           3 RIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIH----GSYE----SLLE--DPEIDALYV   72 (184)
T ss_dssp             EEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEE----SSHH----HHHH--CTTCCEEEE
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeec----CcHH----Hhhh--ccccceeee
Confidence            578999999999888888776 5533334566766644 456677532 1111    1222    2222  457999999


Q ss_pred             cCCCHHHHHHHHHHcccCCEEEEEcCC
Q 020768          261 CAGFNKTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      ++....+++.+..++..+ .=+++.-+
T Consensus        73 ~tp~~~h~~~~~~~l~~g-~~v~~EKP   98 (184)
T d1ydwa1          73 PLPTSLHVEWAIKAAEKG-KHILLEKP   98 (184)
T ss_dssp             CCCGGGHHHHHHHHHTTT-CEEEECSS
T ss_pred             cccchhhcchhhhhhhcc-ceeecccc
Confidence            999888888888888865 44455533

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.32  E-value=0.02  Score=46.44  Aligned_cols=103  Identities=13%  Similarity=0.077  Sum_probs=65.4

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcC----CCeEEecCCCcccHHHHHHHHHH
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG----ADNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g----~~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      ++...++||++||=+|||. |..+..+|+......|++++-+++..+.+++.-    ....+..+..  ....    +..
T Consensus        67 l~~l~ikpG~~VLDlGcGs-G~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~--~~~~----~~~  139 (230)
T d1g8sa_          67 LKVMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDAN--KPQE----YAN  139 (230)
T ss_dssp             CCCCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTT--CGGG----GTT
T ss_pred             HHhCCCCCCCEEEEeCEEc-CHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeec--cCcc----ccc
Confidence            4567899999999999854 677777787654448999999998888776542    1122222211  1111    000


Q ss_pred             HhCCCccEEEEcCCCH----HHHHHHHHHcccCCEEEEE
Q 020768          250 AMGTGIDVSFDCAGFN----KTMSTALSATRAGGKVCLV  284 (321)
Q Consensus       250 ~~~~~~d~vid~~g~~----~~~~~~~~~l~~~G~~v~~  284 (321)
                       ....+|+++....-.    ..+..+.+.|+++|.+++.
T Consensus       140 -~~~~v~~i~~~~~~~~~~~~~l~~~~r~LKpgG~~~i~  177 (230)
T d1g8sa_         140 -IVEKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             -TCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             -ccceeEEeeccccchHHHHHHHHHHHHhcccCceEEEE
Confidence             122355666654421    2466778899999998876

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.27  E-value=0.054  Score=43.92  Aligned_cols=47  Identities=28%  Similarity=0.336  Sum_probs=38.7

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHH-HHHHcCCC
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGAD  228 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~-~~~~~g~~  228 (321)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+ .+++++..
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~   52 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNN   52 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCC
Confidence            5889999998 9999999999999999 6888888876665 44567654

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=95.23  E-value=0.048  Score=44.53  Aligned_cols=79  Identities=15%  Similarity=0.107  Sum_probs=46.8

Q ss_pred             EEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHH--HHHH----HcCCCeEEec-C-CCcccHHHHHHH----HHHH
Q 020768          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRL--SVAK----ELGADNIVKV-S-TNLQDIAEEVEK----IQKA  250 (321)
Q Consensus       184 ~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~--~~~~----~~g~~~vi~~-~-~~~~~~~~~~~~----~~~~  250 (321)
                      +.||+|+ +++|.+.+..+...|+ .|+.++++.++.  +.++    ..+....... . ....+..+.+.+    ..+.
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            4688898 9999999999999999 677777775432  2222    2233332211 1 111122222222    2222


Q ss_pred             hCCCccEEEEcCCC
Q 020768          251 MGTGIDVSFDCAGF  264 (321)
Q Consensus       251 ~~~~~d~vid~~g~  264 (321)
                       .+.+|++++++|.
T Consensus        82 -~g~iDilvnnAG~   94 (266)
T d1mxha_          82 -FGRCDVLVNNASA   94 (266)
T ss_dssp             -HSCCCEEEECCCC
T ss_pred             -hCCCCEEEECCcc
Confidence             3579999999883

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.23  E-value=0.055  Score=42.72  Aligned_cols=94  Identities=15%  Similarity=0.179  Sum_probs=61.7

Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCe-EEecCCCcccHHHHHHHHHHHhC
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADN-IVKVSTNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~-vi~~~~~~~~~~~~~~~~~~~~~  252 (321)
                      .++++++||=+|||. |..+..+++. |. .++++|.+++..+.+++    .+... .+..  +..++.        ...
T Consensus        34 ~l~~~~~ILDiGcG~-G~~~~~la~~-~~-~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~--d~~~l~--------~~~  100 (226)
T d1ve3a1          34 YMKKRGKVLDLACGV-GGFSFLLEDY-GF-EVVGVDISEDMIRKAREYAKSRESNVEFIVG--DARKLS--------FED  100 (226)
T ss_dssp             SCCSCCEEEEETCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEEC--CTTSCC--------SCT
T ss_pred             hcCCCCEEEEECCCc-chhhhhHhhh-hc-ccccccccccchhhhhhhhcccccccccccc--cccccc--------ccC
Confidence            457889999999865 6677788764 76 79999999988877654    33322 2221  111110        113


Q ss_pred             CCccEEEEcCCC-----H---HHHHHHHHHcccCCEEEEE
Q 020768          253 TGIDVSFDCAGF-----N---KTMSTALSATRAGGKVCLV  284 (321)
Q Consensus       253 ~~~d~vid~~g~-----~---~~~~~~~~~l~~~G~~v~~  284 (321)
                      ..+|+|+-...-     .   ..+..+.+.|+|||++++.
T Consensus       101 ~~fD~I~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~lii~  140 (226)
T d1ve3a1         101 KTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMY  140 (226)
T ss_dssp             TCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cCceEEEEecchhhCChhHHHHHHHHHHHHcCcCcEEEEE
Confidence            568998864331     1   2577889999999998764

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=95.08  E-value=0.1  Score=39.30  Aligned_cols=95  Identities=20%  Similarity=0.262  Sum_probs=57.5

Q ss_pred             CEEEEEcCChhHH-HHHHHHHHcCCCeEEEE-eCCh--hHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768          183 TNVLIMGAGPIGL-VTMLGARAFGAPRIVIV-DVDD--YRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       183 ~~vlI~Gag~vG~-~a~qla~~~g~~~vv~v-~~~~--~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      =++.|+|+|.+|. ..+++++....-.++++ +++.  ....+++++|......      . .+.+.+.  ....++|+|
T Consensus         5 irvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~~------~-~d~l~~~--~~~~~iDiV   75 (157)
T d1nvmb1           5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYA------G-VEGLIKL--PEFADIDFV   75 (157)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESS------H-HHHHHHS--GGGGGEEEE
T ss_pred             cEEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCccccc------c-eeeeeec--ccccccCEE
Confidence            3789999999986 56778776644345554 4443  3456788888764211      1 1122111  113469999


Q ss_pred             EEcCCCHHHHHHH--HHHcccCCEEEEEcC
Q 020768          259 FDCAGFNKTMSTA--LSATRAGGKVCLVGM  286 (321)
Q Consensus       259 id~~g~~~~~~~~--~~~l~~~G~~v~~g~  286 (321)
                      |+++....+.+..  .+.++.|-.++....
T Consensus        76 f~ATpag~h~~~~~~~~aa~~G~~VID~s~  105 (157)
T d1nvmb1          76 FDATSASAHVQNEALLRQAKPGIRLIDLTP  105 (157)
T ss_dssp             EECSCHHHHHHHHHHHHHHCTTCEEEECST
T ss_pred             EEcCCchhHHHhHHHHHHHHcCCEEEEccc
Confidence            9998865565544  445666666666653

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.05  E-value=0.064  Score=43.85  Aligned_cols=82  Identities=15%  Similarity=0.111  Sum_probs=47.3

Q ss_pred             CCCEEEEEcC-ChhHHHHHH-HHHH--cCCCeEEEEeCChhHHHHHH-Hc---CC-CeE--EecCC-CcccHHHHHHHHH
Q 020768          181 PETNVLIMGA-GPIGLVTML-GARA--FGAPRIVIVDVDDYRLSVAK-EL---GA-DNI--VKVST-NLQDIAEEVEKIQ  248 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~q-la~~--~g~~~vv~v~~~~~~~~~~~-~~---g~-~~v--i~~~~-~~~~~~~~~~~~~  248 (321)
                      .|+.++|+|+ +++|...++ ||+.  .|+ .|+.+++++++.+.+. ++   +. ..+  +..+- +.++..+.+..+.
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~   83 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR   83 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCC-EEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            3667788898 999987765 4553  588 7888889988776542 22   22 222  22221 2222233333333


Q ss_pred             HH---hCCCccEEEEcCC
Q 020768          249 KA---MGTGIDVSFDCAG  263 (321)
Q Consensus       249 ~~---~~~~~d~vid~~g  263 (321)
                      +.   .+...|+++++.|
T Consensus        84 ~~~~~~~~~~~~lvnnag  101 (259)
T d1oaaa_          84 ELPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             HSCCCTTCCEEEEEECCC
T ss_pred             HhhhhccCceEEEEeccc
Confidence            32   2345788998766

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.03  E-value=0.065  Score=45.55  Aligned_cols=106  Identities=23%  Similarity=0.232  Sum_probs=66.5

Q ss_pred             cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHhC
Q 020768          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~~~~  252 (321)
                      ..+++|++||=.++| .|..++.+|+ .|+..|++++.+++..+.+++    .|....+...  ..|..+.+..+.. .+
T Consensus       141 ~~~~~g~~VLDl~~g-~G~~si~~a~-~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~--~~d~~~~~~~~~~-~~  215 (324)
T d2as0a2         141 KWVQPGDRVLDVFTY-TGGFAIHAAI-AGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFI--VGSAFEEMEKLQK-KG  215 (324)
T ss_dssp             GGCCTTCEEEETTCT-TTHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEE--ESCHHHHHHHHHH-TT
T ss_pred             hhcCCCCeeecccCc-ccchhhhhhh-cCCcEEEeecCCHHHHHHHHHHHHHcCCCccceee--echhhhhhHHHHh-cc
Confidence            345789999877652 2333334443 477789999999998887653    4543211111  1344444444432 35


Q ss_pred             CCccEEEEcCCC---------------HHHHHHHHHHcccCCEEEEEcCC
Q 020768          253 TGIDVSFDCAGF---------------NKTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       253 ~~~d~vid~~g~---------------~~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      ..||+|+--...               .+.+..++++|++||.++.+.-+
T Consensus       216 ~~fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s~s  265 (324)
T d2as0a2         216 EKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS  265 (324)
T ss_dssp             CCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred             CCCCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeCC
Confidence            679999863332               12567788999999999988744

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=94.83  E-value=0.082  Score=41.47  Aligned_cols=86  Identities=19%  Similarity=0.178  Sum_probs=57.0

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      .|.+|.|+|.|.+|...+++++.+|+ .|++.+...+....  ..+..    .    .++.+.+.        ..|+++.
T Consensus        42 ~gk~vgIiG~G~IG~~va~~l~~fg~-~V~~~d~~~~~~~~--~~~~~----~----~~l~~~l~--------~sDii~~  102 (197)
T d1j4aa1          42 RDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRNPELE--KKGYY----V----DSLDDLYK--------QADVISL  102 (197)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHHHH--HTTCB----C----SCHHHHHH--------HCSEEEE
T ss_pred             cCCeEEEecccccchhHHHhHhhhcc-cccccCcccccccc--cceee----e----cccccccc--------ccccccc
Confidence            37799999999999999999999999 68888765443322  11211    1    12222222        2688888


Q ss_pred             cCCCH-H---HH-HHHHHHcccCCEEEEEc
Q 020768          261 CAGFN-K---TM-STALSATRAGGKVCLVG  285 (321)
Q Consensus       261 ~~g~~-~---~~-~~~~~~l~~~G~~v~~g  285 (321)
                      +..-. +   .+ ...++.++++..++.++
T Consensus       103 ~~plt~~T~~li~~~~l~~mk~~a~lIN~s  132 (197)
T d1j4aa1         103 HVPDVPANVHMINDESIAKMKQDVVIVNVS  132 (197)
T ss_dssp             CSCCCGGGTTCBSHHHHHHSCTTEEEEECS
T ss_pred             cCCccccccccccHHHHhhhCCccEEEecC
Confidence            76532 1   12 36678888888888877

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=94.81  E-value=0.079  Score=43.27  Aligned_cols=85  Identities=22%  Similarity=0.395  Sum_probs=52.5

Q ss_pred             CCCCCEEEEEcC-C--hhHHHHHHHHHHcCCCeEEEEeCChhHH-H-HHHHcCCCe-EEecCC-CcccHHHHHHHHHHHh
Q 020768          179 IGPETNVLIMGA-G--PIGLVTMLGARAFGAPRIVIVDVDDYRL-S-VAKELGADN-IVKVST-NLQDIAEEVEKIQKAM  251 (321)
Q Consensus       179 ~~~g~~vlI~Ga-g--~vG~~a~qla~~~g~~~vv~v~~~~~~~-~-~~~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~  251 (321)
                      +=.|+++||+|+ |  ++|...++-+...|+ .|+.+.++.++. + ..++++... .+..+- ...+..+....+.+..
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga-~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~   81 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAI   81 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhcc
Confidence            346899999995 4  599999998999999 577777776654 3 334566432 222221 1223333333333222


Q ss_pred             --CCCccEEEEcCCC
Q 020768          252 --GTGIDVSFDCAGF  264 (321)
Q Consensus       252 --~~~~d~vid~~g~  264 (321)
                        .+.+|+++.+.|.
T Consensus        82 ~~~~~ld~~i~~ag~   96 (268)
T d2h7ma1          82 GAGNKLDGVVHSIGF   96 (268)
T ss_dssp             CTTCCEEEEEECCCC
T ss_pred             ccCCCcceeeecccc
Confidence              3568999999873

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=94.70  E-value=0.19  Score=38.34  Aligned_cols=100  Identities=18%  Similarity=0.203  Sum_probs=63.1

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEE-eCC-hhHHHHHHHcCCCeEEecCCCcccHHH-------HHHHHHHHhCCC
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIV-DVD-DYRLSVAKELGADNIVKVSTNLQDIAE-------EVEKIQKAMGTG  254 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v-~~~-~~~~~~~~~~g~~~vi~~~~~~~~~~~-------~~~~~~~~~~~~  254 (321)
                      +|.|.|-|-+|.+.++.+...+--.++++ +.+ ......+..++.+......+....+.+       ....+    ..+
T Consensus         3 ~VgINGfGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~----~~~   78 (171)
T d1cf2o1           3 AVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDM----LDE   78 (171)
T ss_dssp             EEEEECCSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHH----HHT
T ss_pred             EEEEEcCcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHh----hcC
Confidence            68899999999999998876653245544 333 344556667776543322211111110       01111    136


Q ss_pred             ccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCC
Q 020768          255 IDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       255 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      +|+|+||+|.-...+.+-..+..+-+.+..+.+
T Consensus        79 vDvViEcTG~f~~~~~~~~hl~~G~K~vi~~~~  111 (171)
T d1cf2o1          79 ADIVIDCTPEGIGAKNLKMYKEKGIKAIFQGGE  111 (171)
T ss_dssp             CSEEEECCSTTHHHHHHHHHHHTTCEEEECTTS
T ss_pred             CCEEEEccCCCCCHHHHHHHHHcCCCEEEECCC
Confidence            999999999987778888889888887777654

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=94.55  E-value=0.012  Score=44.63  Aligned_cols=93  Identities=9%  Similarity=0.038  Sum_probs=54.8

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCC
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  263 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  263 (321)
                      +|+|+|+|.+|.+....+...|. .|..+++++++.+.....+............+..+.   .     ..+|++|-++-
T Consensus         2 kI~IiGaG~iG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----~~~D~iii~vk   72 (167)
T d1ks9a2           2 KITVLGCGALGQLWLTALCKQGH-EVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDF---L-----ATSDLLLVTLK   72 (167)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHH---H-----HTCSEEEECSC
T ss_pred             EEEEECcCHHHHHHHHHHHHCCC-ceEEEEcCHHHhhhhccccCCccccccccccchhhh---h-----cccceEEEeec
Confidence            68999999999988888888898 677777776554433322321100000000111111   1     35899999998


Q ss_pred             CHHH---HHHHHHHcccCCEEEEEc
Q 020768          264 FNKT---MSTALSATRAGGKVCLVG  285 (321)
Q Consensus       264 ~~~~---~~~~~~~l~~~G~~v~~g  285 (321)
                      ...+   ++.+...++++..++.+.
T Consensus        73 a~~~~~~~~~l~~~~~~~~~Iv~~q   97 (167)
T d1ks9a2          73 AWQVSDAVKSLASTLPVTTPILLIH   97 (167)
T ss_dssp             GGGHHHHHHHHHTTSCTTSCEEEEC
T ss_pred             ccchHHHHHhhccccCcccEEeecc
Confidence            7533   333444556666666654

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=94.51  E-value=0.16  Score=38.80  Aligned_cols=44  Identities=11%  Similarity=0.158  Sum_probs=37.1

Q ss_pred             CEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCC
Q 020768          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA  227 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~  227 (321)
                      .+|-++|.|.+|...+.-+...|+ .|++.+++++|.+.+.+.++
T Consensus         3 ~nIg~IGlG~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~   46 (176)
T d2pgda2           3 ADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTVSKVDDFLANEA   46 (176)
T ss_dssp             BSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSTHHHHHHHHTTT
T ss_pred             CcEEEEeEhHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHhcc
Confidence            468899999999988888888899 58899999999888776554

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.51  E-value=0.11  Score=38.68  Aligned_cols=85  Identities=12%  Similarity=0.144  Sum_probs=61.0

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcC
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  262 (321)
                      +|.++|+|.+|.+.+.-....|. .+++.+++.++.+.+ +++|....-       +..+.+        ...|+||-|+
T Consensus         2 kIg~IG~G~mG~al~~~l~~~~~-~i~v~~r~~~~~~~l~~~~g~~~~~-------~~~~~~--------~~~dvIilav   65 (152)
T d2ahra2           2 KIGIIGVGKMASAIIKGLKQTPH-ELIISGSSLERSKEIAEQLALPYAM-------SHQDLI--------DQVDLVILGI   65 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHTTSSC-EEEEECSSHHHHHHHHHHHTCCBCS-------SHHHHH--------HTCSEEEECS
T ss_pred             EEEEEeccHHHHHHHHHHHhCCC-eEEEEcChHHhHHhhccccceeeec-------hhhhhh--------hccceeeeec
Confidence            57889999999988776666676 688888888876655 677865321       111111        2479999999


Q ss_pred             CCHHHHHHHHHHcccCCEEEEEc
Q 020768          263 GFNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       263 g~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      - ++.+...++.++++..++.+.
T Consensus        66 k-p~~~~~vl~~l~~~~~iis~~   87 (152)
T d2ahra2          66 K-PQLFETVLKPLHFKQPIISMA   87 (152)
T ss_dssp             C-GGGHHHHHTTSCCCSCEEECC
T ss_pred             c-hHhHHHHhhhcccceeEeccc
Confidence            7 567788888888887777654

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=94.46  E-value=0.058  Score=45.77  Aligned_cols=101  Identities=17%  Similarity=0.123  Sum_probs=63.0

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHHhCCCc
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~  255 (321)
                      .+|++||=.++|. |..++++|+  |+..|++++.+++..+.++    ..|.+.+-...   .+..+.++.+.. .+..|
T Consensus       144 ~~g~rVLDl~~gt-G~~s~~~a~--g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~---~d~~~~~~~~~~-~~~~f  216 (318)
T d1wxxa2         144 FRGERALDVFSYA-GGFALHLAL--GFREVVAVDSSAEALRRAEENARLNGLGNVRVLE---ANAFDLLRRLEK-EGERF  216 (318)
T ss_dssp             CCEEEEEEETCTT-THHHHHHHH--HEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEE---SCHHHHHHHHHH-TTCCE
T ss_pred             hCCCeeeccCCCC-cHHHHHHHh--cCCcEEeecchHHHHHHHHHHHHHcCCCCcceee---ccHHHHhhhhHh-hhcCC
Confidence            4689998886632 223344554  3447999999999888775    35555332221   234444444432 35679


Q ss_pred             cEEEEcCCC---------------HHHHHHHHHHcccCCEEEEEcCC
Q 020768          256 DVSFDCAGF---------------NKTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       256 d~vid~~g~---------------~~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      |+|+--...               .+.+..++++|+|||.++...-+
T Consensus       217 D~Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~scs  263 (318)
T d1wxxa2         217 DLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS  263 (318)
T ss_dssp             EEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             CEEEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence            998853321               02466788899999999887744

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=94.45  E-value=0.037  Score=43.10  Aligned_cols=40  Identities=18%  Similarity=0.322  Sum_probs=33.7

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA  222 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~  222 (321)
                      =++|.|+|+|.+|...+.++...|+ .|+..+.+++..+.+
T Consensus         4 I~~vaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~~   43 (186)
T d1wdka3           4 VKQAAVLGAGIMGGGIAYQSASKGT-PILMKDINEHGIEQG   43 (186)
T ss_dssp             CSSEEEECCHHHHHHHHHHHHHTTC-CEEEECSSHHHHHHH
T ss_pred             CCEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHhhh
Confidence            3679999999999998888888999 588999998776544

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=94.39  E-value=0.06  Score=43.37  Aligned_cols=109  Identities=20%  Similarity=0.161  Sum_probs=70.0

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-HcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      -.|.+|+|.|-|.+|..+++++...|+ ++++++.+..+.+.+. ..|... +..    .+          .....+|+.
T Consensus        37 l~g~~v~IqG~GnVG~~~a~~L~~~Ga-kvv~~d~~~~~~~~~~~~~g~~~-~~~----~~----------~~~~~cDIl  100 (230)
T d1leha1          37 LEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGADA-VAP----NA----------IYGVTCDIF  100 (230)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCCEE-CCG----GG----------TTTCCCSEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEeecccHHHHHHHHHhcCCcc-cCC----cc----------cccccccEe
Confidence            368899999999999999999999999 7888888888876554 466543 221    11          114578999


Q ss_pred             EEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccc-hhhhccceEEE
Q 020768          259 FDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPL-TPAAARYLIYS  306 (321)
Q Consensus       259 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~k~~~i~  306 (321)
                      +=|.-+...=+.....++  .+++.=+..++..+... ..|..|+|.+.
T Consensus       101 ~PcA~~~~I~~~~~~~l~--ak~Ive~ANn~~t~~ea~~~L~~rGI~~i  147 (230)
T d1leha1         101 APCALGAVLNDFTIPQLK--AKVIAGSADNQLKDPRHGKYLHELGIVYA  147 (230)
T ss_dssp             EECSCSCCBSTTHHHHCC--CSEECCSCSCCBSSHHHHHHHHHHTCEEC
T ss_pred             cccccccccChHHhhccC--ccEEEecccCCCCCchHHHHHHhhCcEEE
Confidence            888776433334444454  34443344355433333 22677777553

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.36  E-value=0.092  Score=42.26  Aligned_cols=95  Identities=21%  Similarity=0.233  Sum_probs=64.1

Q ss_pred             HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHc----CCCe-EEecCCCcccHHHHHHHHHH
Q 020768          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL----GADN-IVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~----g~~~-vi~~~~~~~~~~~~~~~~~~  249 (321)
                      +....+++.+||=+|+|. |..+..+++ .|+ .+++++.+++-.+.+++.    +... ++.  .+..+       +  
T Consensus        35 ~~~~~~~~~~iLDiGcGt-G~~~~~l~~-~~~-~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~--~d~~~-------l--  100 (251)
T d1wzna1          35 KEDAKREVRRVLDLACGT-GIPTLELAE-RGY-EVVGLDLHEEMLRVARRKAKERNLKIEFLQ--GDVLE-------I--  100 (251)
T ss_dssp             HHTCSSCCCEEEEETCTT-CHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEE--SCGGG-------C--
T ss_pred             HHhcCCCCCEEEEeCCCC-Cccchhhcc-cce-EEEEEeeccccccccccccccccccchhee--hhhhh-------c--
Confidence            445667788999999976 777777776 577 799999999888877643    3321 222  11111       1  


Q ss_pred             HhCCCccEEEEcCCC---------HHHHHHHHHHcccCCEEEE
Q 020768          250 AMGTGIDVSFDCAGF---------NKTMSTALSATRAGGKVCL  283 (321)
Q Consensus       250 ~~~~~~d~vid~~g~---------~~~~~~~~~~l~~~G~~v~  283 (321)
                      .....+|+|+...+.         ...++.+.+.|++||.++.
T Consensus       101 ~~~~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~LkpgG~lii  143 (251)
T d1wzna1         101 AFKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT  143 (251)
T ss_dssp             CCCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             ccccccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCCcEEEE
Confidence            114579998875322         1357788999999999876

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.36  E-value=0.12  Score=43.07  Aligned_cols=99  Identities=19%  Similarity=0.196  Sum_probs=65.4

Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCC---------C-eEEecCCCcccHHHHHHHH
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA---------D-NIVKVSTNLQDIAEEVEKI  247 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~---------~-~vi~~~~~~~~~~~~~~~~  247 (321)
                      .....++|||+|+|. |..+-.+++..+...+.+++-+++-.+.++++-.         . .++.     .|..+.++  
T Consensus        75 ~~~~pk~vLiiGgG~-G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~-----~Da~~~l~--  146 (285)
T d2o07a1          75 SHPNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHV-----GDGFEFMK--  146 (285)
T ss_dssp             TSSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE-----SCHHHHHH--
T ss_pred             hCcCcCeEEEeCCCc-hHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEE-----ccHHHHHh--
Confidence            334568999998654 4555566777677789999999999988877431         1 1111     23333333  


Q ss_pred             HHHhCCCccEEEEcCCCH----------HHHHHHHHHcccCCEEEEEcC
Q 020768          248 QKAMGTGIDVSFDCAGFN----------KTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       248 ~~~~~~~~d~vid~~g~~----------~~~~~~~~~l~~~G~~v~~g~  286 (321)
                        .....+|+||--...+          +.++.+-+.|+++|.++.-+.
T Consensus       147 --~~~~~yDvIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~~  193 (285)
T d2o07a1         147 --QNQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGE  193 (285)
T ss_dssp             --TCSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEEE
T ss_pred             --cCCCCCCEEEEcCCCCCCcccccccHHHHHHHHHhcCCCCeEEEecc
Confidence              2356799988543322          357888899999999988653

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=94.35  E-value=0.12  Score=43.56  Aligned_cols=103  Identities=17%  Similarity=0.129  Sum_probs=66.0

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCC--eEEecC---CCcccHHHHHHHHHHHhCCC
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD--NIVKVS---TNLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~--~vi~~~---~~~~~~~~~~~~~~~~~~~~  254 (321)
                      ...++|||+|+|. |..+-.+++......|.+++-+++-.+.++++-..  ...+..   -...|..+.+++    ....
T Consensus       105 ~~pk~VLIiGgG~-G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~Da~~~l~~----~~~~  179 (312)
T d2b2ca1         105 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKN----HKNE  179 (312)
T ss_dssp             SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHH----CTTC
T ss_pred             CCCCeEEEeCCCc-hHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEchHHHHHHh----CCCC
Confidence            3457999998754 44455677777766899999999999999885321  000000   001244444432    3567


Q ss_pred             ccEEEEcCCCH----------HHHHHHHHHcccCCEEEEEcCC
Q 020768          255 IDVSFDCAGFN----------KTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       255 ~d~vid~~g~~----------~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      +|+||--...+          +.++.+.+.|+++|.++.-+..
T Consensus       180 yDvII~D~~dp~~~~~~L~t~eFy~~~~~~L~~~Gi~v~q~~s  222 (312)
T d2b2ca1         180 FDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGES  222 (312)
T ss_dssp             EEEEEECCC-------------HHHHHHHHEEEEEEEEEECCC
T ss_pred             CCEEEEcCCCCCCcchhhhhHHHHHHHHhhcCCCcEEEEecCC
Confidence            99999543322          3477888999999999987643

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=94.33  E-value=0.51  Score=38.87  Aligned_cols=112  Identities=14%  Similarity=0.138  Sum_probs=72.3

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeC--ChhHHHHHHHcCCCeEEecCCC---------------
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV--DDYRLSVAKELGADNIVKVSTN---------------  236 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~--~~~~~~~~~~~g~~~vi~~~~~---------------  236 (321)
                      .+...++++.+|+...+|..|++++..++.+|.+.+|++..  ++.|.+.++.+|++.++.....               
T Consensus        52 ~~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~~~~~~a~~~~~~~~~~  131 (292)
T d2bhsa1          52 EKRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANR  131 (292)
T ss_dssp             HHTTSCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHH
T ss_pred             HHhCCcCCCceeeeecccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHHHhCCCcceeecccchHHHHHHHhhcccc
Confidence            34556666776666677999999999999999976666653  4678888999999755432110               


Q ss_pred             -----------cccHHH----HHHHHHHHhCCCccEEEEcCCCHHHHHH---HHHHcccCCEEEEEc
Q 020768          237 -----------LQDIAE----EVEKIQKAMGTGIDVSFDCAGFNKTMST---ALSATRAGGKVCLVG  285 (321)
Q Consensus       237 -----------~~~~~~----~~~~~~~~~~~~~d~vid~~g~~~~~~~---~~~~l~~~G~~v~~g  285 (321)
                                 ..++..    ...++.+..+..+|.++-++|+..++.-   .++...+..+++.+-
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~~~i~~Ve  198 (292)
T d2bhsa1         132 GEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQ  198 (292)
T ss_dssp             TSSEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEE
T ss_pred             ccccccCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhhhhhhhhccCcceEEEec
Confidence                       000101    1123333345568999999888666554   444456677776664

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.26  E-value=0.064  Score=45.16  Aligned_cols=96  Identities=20%  Similarity=0.297  Sum_probs=55.6

Q ss_pred             cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHH---HHHHcCCC-eEEecCCCcccHHHHHHHHHHHhC
Q 020768          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS---VAKELGAD-NIVKVSTNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~---~~~~~g~~-~vi~~~~~~~~~~~~~~~~~~~~~  252 (321)
                      ..+.+|++||-+|+| .|.+++.+|+ .|++.|++++.++.-..   ..++.+.. .+.....+..++       . ...
T Consensus        31 ~~~~~~~~VLDiGcG-~G~lsl~aa~-~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l-------~-~~~  100 (311)
T d2fyta1          31 PHIFKDKVVLDVGCG-TGILSMFAAK-AGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEV-------H-LPV  100 (311)
T ss_dssp             GGGTTTCEEEEETCT-TSHHHHHHHH-TTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTS-------C-CSC
T ss_pred             cccCCcCEEEEECCC-CCHHHHHHHH-cCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHh-------c-Ccc
Confidence            466789999999986 4666666665 47778999998875432   23344432 222221211111       0 113


Q ss_pred             CCccEEEEcC-----CCHHH----HHHHHHHcccCCEEE
Q 020768          253 TGIDVSFDCA-----GFNKT----MSTALSATRAGGKVC  282 (321)
Q Consensus       253 ~~~d~vid~~-----g~~~~----~~~~~~~l~~~G~~v  282 (321)
                      ..+|+|+...     .....    +...-+.|+|+|+++
T Consensus       101 ~~~D~Ivse~~~~~~~~e~~~~~~~~a~~~~Lkp~G~ii  139 (311)
T d2fyta1         101 EKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY  139 (311)
T ss_dssp             SCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred             ccceEEEEeeeeeecccccccHHHHHHHHhcCCCCcEEe
Confidence            5789998521     11122    333346799999875

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.25  E-value=0.36  Score=41.19  Aligned_cols=113  Identities=18%  Similarity=0.257  Sum_probs=75.0

Q ss_pred             HHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC--hhHHHHHHHcCCCeEEecCC---------------
Q 020768          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD--DYRLSVAKELGADNIVKVST---------------  235 (321)
Q Consensus       173 ~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~--~~~~~~~~~~g~~~vi~~~~---------------  235 (321)
                      +.+...+++++.|+...+|..|.+.+..|+.+|.+.++++...  ++|.+.++.+|++.+.....               
T Consensus        88 a~~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~~~GA~vv~v~~~~~~~~~~~~~~~~~~  167 (355)
T d1jbqa_          88 AERDGTLKPGDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWR  167 (355)
T ss_dssp             HHHHTCSCTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHH
T ss_pred             HHHcCCcccCceEEEecccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHHhcCCeEEEecccccchhhhhhhhHHHH
Confidence            3455667777877766779999999999999999766666443  67888999999976542110               


Q ss_pred             ---------------CcccHH----HHHHHHHHHhCCCccEEEEcCCCHHHHHHHH---HHcccCCEEEEEc
Q 020768          236 ---------------NLQDIA----EEVEKIQKAMGTGIDVSFDCAGFNKTMSTAL---SATRAGGKVCLVG  285 (321)
Q Consensus       236 ---------------~~~~~~----~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~---~~l~~~G~~v~~g  285 (321)
                                     ...+..    ....++.+..+..+|.++-++|+..++..+.   +...++-+++.+.
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~~kii~ve  239 (355)
T d1jbqa_         168 LKNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVD  239 (355)
T ss_dssp             HHHHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             HHHhccccccccccCcccchhhhcccchhhhhhhcCCCCCeeEecccCCchHHHHHHHHhhcCCcceEEeec
Confidence                           000011    0123333344556899999999876665444   4445677877765

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.24  E-value=0.14  Score=42.60  Aligned_cols=99  Identities=21%  Similarity=0.226  Sum_probs=66.3

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCC---------CeEEecCCCcccHHHHHHHHHHH
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA---------DNIVKVSTNLQDIAEEVEKIQKA  250 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~---------~~vi~~~~~~~~~~~~~~~~~~~  250 (321)
                      ...++|||+|+|. |..+-.+++..+...+.+++-+++-.+.++++-.         ..-+..    .|..+.+++   .
T Consensus        79 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~----~Da~~~l~~---~  150 (290)
T d1xj5a_          79 PNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI----GDGVAFLKN---A  150 (290)
T ss_dssp             SCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEE----SCHHHHHHT---S
T ss_pred             CCCcceEEecCCc-hHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEE----ccHHHHHhh---c
Confidence            4557999998644 4555577777777789999999999998887531         111111    233333332   2


Q ss_pred             hCCCccEEEEcCCC----------HHHHHHHHHHcccCCEEEEEcC
Q 020768          251 MGTGIDVSFDCAGF----------NKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       251 ~~~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      ....+|+||--...          .+.++.+.+.|+++|.++.-..
T Consensus       151 ~~~~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~~  196 (290)
T d1xj5a_         151 AEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAE  196 (290)
T ss_dssp             CTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECC
T ss_pred             cccCccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCCcEEEEecC
Confidence            24579987753332          3568899999999999988763

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.18  E-value=0.064  Score=39.00  Aligned_cols=95  Identities=14%  Similarity=0.134  Sum_probs=57.6

Q ss_pred             EEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcC
Q 020768          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (321)
Q Consensus       184 ~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  262 (321)
                      +|.|+|+ |-+|....+++...+...+..++.+...                    .            -..+|++||.+
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~--------------------~------------~~~~DVvIDFS   49 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE--------------------E------------LDSPDVVIDFS   49 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE--------------------E------------CSCCSEEEECS
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH--------------------H------------hccCCEEEEec
Confidence            5899998 9999999999999888544444422110                    0            13467888876


Q ss_pred             CCHHHHHHHHHHcccCCEEEEEcCCCCC-ccccchhhhccceEEEEeehh
Q 020768          263 GFNKTMSTALSATRAGGKVCLVGMGHLE-MTVPLTPAAARYLIYSFLFHF  311 (321)
Q Consensus       263 g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~k~~~i~g~~~~  311 (321)
                      . ++.+...++.+..++.=+.+|.++-. .....-.-..|.+-+.++..+
T Consensus        50 ~-p~~~~~~l~~~~~~~~p~ViGTTG~~~~~~~~i~~~ak~~pv~~a~N~   98 (128)
T d1vm6a3          50 S-PEALPKTVDLCKKYRAGLVLGTTALKEEHLQMLRELSKEVPVVQAYSR   98 (128)
T ss_dssp             C-GGGHHHHHHHHHHHTCEEEECCCSCCHHHHHHHHHHTTTSEEEECSCT
T ss_pred             C-HHHHHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHhhCCEEeeecc
Confidence            6 35555555555555665667766432 223322233466666665443

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=94.17  E-value=0.13  Score=35.27  Aligned_cols=51  Identities=16%  Similarity=0.104  Sum_probs=40.2

Q ss_pred             CCCCCEEEEEcCChhHHHH-HHHHHHcCCCeEEEEeCC-hhHHHHHHHcCCCeE
Q 020768          179 IGPETNVLIMGAGPIGLVT-MLGARAFGAPRIVIVDVD-DYRLSVAKELGADNI  230 (321)
Q Consensus       179 ~~~g~~vlI~Gag~vG~~a-~qla~~~g~~~vv~v~~~-~~~~~~~~~~g~~~v  230 (321)
                      ++..+++.++|.|++|+.+ +++++..|+ .|.+.|.. ....+.+++.|+...
T Consensus         5 ~~~~~~ihfiGigG~GMs~LA~~L~~~G~-~VsGSD~~~~~~~~~L~~~Gi~v~   57 (96)
T d1p3da1           5 MRRVQQIHFIGIGGAGMSGIAEILLNEGY-QISGSDIADGVVTQRLAQAGAKIY   57 (96)
T ss_dssp             CTTCCEEEEETTTSTTHHHHHHHHHHHTC-EEEEEESCCSHHHHHHHHTTCEEE
T ss_pred             chhCCEEEEEEECHHHHHHHHHHHHhCCC-EEEEEeCCCChhhhHHHHCCCeEE
Confidence            5667899999999999887 799999999 78888875 345566677887643

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.10  E-value=0.025  Score=43.82  Aligned_cols=36  Identities=19%  Similarity=0.362  Sum_probs=30.7

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~  216 (321)
                      .+++|+|+|+|+.|+.++..++..|++.|.+++.++
T Consensus         3 ~~~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           3 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCCEEEEECChHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            368999999999999999999999996576776654

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=94.10  E-value=0.067  Score=45.21  Aligned_cols=96  Identities=23%  Similarity=0.208  Sum_probs=64.7

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcC------C----C-eEEecCCCcccHHHHHHHHH
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG------A----D-NIVKVSTNLQDIAEEVEKIQ  248 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g------~----~-~vi~~~~~~~~~~~~~~~~~  248 (321)
                      ...++|||+|+|. |..+-.+++......|.+++-+++-.+.++++-      +    . .++.     .|..+.+++  
T Consensus        76 ~~pk~VLiiG~G~-G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~-----~Da~~~l~~--  147 (312)
T d1uira_          76 PEPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVI-----DDARAYLER--  147 (312)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEE-----SCHHHHHHH--
T ss_pred             CCcceEEEeCCCc-hHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEE-----chHHHHhhh--
Confidence            4568999998754 555666777766668999999999888887642      1    0 1221     344444433  


Q ss_pred             HHhCCCccEEEEcC----C---------CHHHHHHHHHHcccCCEEEEEc
Q 020768          249 KAMGTGIDVSFDCA----G---------FNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       249 ~~~~~~~d~vid~~----g---------~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                        ....+|+||--.    +         +.+.++.+.+.|+++|.++.-.
T Consensus       148 --~~~~yDvIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~Gvlv~~~  195 (312)
T d1uira_         148 --TEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT  195 (312)
T ss_dssp             --CCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred             --cCCcccEEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCCceEEEec
Confidence              367799987432    2         1246788999999999987654

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.09  E-value=0.11  Score=40.91  Aligned_cols=73  Identities=16%  Similarity=0.064  Sum_probs=45.5

Q ss_pred             CEEEEEcC-ChhHHHHHHHHHHcCCC-eEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          183 TNVLIMGA-GPIGLVTMLGARAFGAP-RIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~~~g~~-~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      .+|||+|+ |.+|...+..+...|.. .++...+++++.+.+.. +... +..+.  .+.. .+.+..    .++|.|+.
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~-~~~~-~~~d~--~~~~-~~~~~~----~~~d~vi~   74 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG-EADV-FIGDI--TDAD-SINPAF----QGIDALVI   74 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC-CTTE-EECCT--TSHH-HHHHHH----TTCSEEEE
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC-CcEE-EEeee--cccc-cccccc----ccceeeEE
Confidence            58999998 99999999999988864 35556677666543322 2332 22221  2222 222221    46899999


Q ss_pred             cCCC
Q 020768          261 CAGF  264 (321)
Q Consensus       261 ~~g~  264 (321)
                      +.+.
T Consensus        75 ~a~~   78 (252)
T d2q46a1          75 LTSA   78 (252)
T ss_dssp             CCCC
T ss_pred             EEee
Confidence            8764

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=94.04  E-value=0.098  Score=43.81  Aligned_cols=75  Identities=23%  Similarity=0.247  Sum_probs=44.9

Q ss_pred             EEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeC--C---hhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccE
Q 020768          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV--D---DYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       184 ~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~--~---~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      +|||+|+ |-+|...+..+...|. .|++++.  .   .++.+.+...+--.++..+-.  +. +.+.++.+  +.++|+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~-~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~--~~-~~l~~~~~--~~~~d~   75 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGI-DLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIR--NK-NDVTRLIT--KYMPDS   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTT--CH-HHHHHHHH--HHCCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCCcccchhHHHHhhccCCcEEEEcccC--CH-HHHHHHHH--hcCCce
Confidence            7999999 9999999998888898 5777752  1   123334444432233332222  21 12333222  346899


Q ss_pred             EEEcCCC
Q 020768          258 SFDCAGF  264 (321)
Q Consensus       258 vid~~g~  264 (321)
                      ||.+.+.
T Consensus        76 Vih~aa~   82 (338)
T d1orra_          76 CFHLAGQ   82 (338)
T ss_dssp             EEECCCC
T ss_pred             EEeeccc
Confidence            9998763

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=94.02  E-value=0.24  Score=37.87  Aligned_cols=91  Identities=13%  Similarity=0.101  Sum_probs=59.5

Q ss_pred             EEEEEcCChhHHH-HHHHHHHcCCC-eEE-EEeCChhHHHH-HHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          184 NVLIMGAGPIGLV-TMLGARAFGAP-RIV-IVDVDDYRLSV-AKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       184 ~vlI~Gag~vG~~-a~qla~~~g~~-~vv-~v~~~~~~~~~-~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      ++.|+|+|.+|.- .+...+..+.. .++ ++++++++.+. +++++...+..      ++.+    +.+  ...+|+|+
T Consensus         5 rigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~------~~~e----ll~--~~~id~v~   72 (181)
T d1zh8a1           5 RLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFD------SYEE----LLE--SGLVDAVD   72 (181)
T ss_dssp             EEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEES------CHHH----HHH--SSCCSEEE
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceee------eeec----ccc--ccccceee
Confidence            6889999999864 56666654432 344 55677766554 56677665432      3332    222  46799999


Q ss_pred             EcCCCHHHHHHHHHHcccCCEEEEEcCC
Q 020768          260 DCAGFNKTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       260 d~~g~~~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      -|+....+++.+..++..+ .=+++--+
T Consensus        73 I~tp~~~h~~~~~~al~~g-k~V~~EKP   99 (181)
T d1zh8a1          73 LTLPVELNLPFIEKALRKG-VHVICEKP   99 (181)
T ss_dssp             ECCCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred             ccccccccccccccccccc-hhhhcCCC
Confidence            9999888888888888865 44555543

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=94.01  E-value=0.11  Score=41.97  Aligned_cols=33  Identities=24%  Similarity=0.446  Sum_probs=29.9

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeC
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV  214 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~  214 (321)
                      ..+|+|+|+|++|..++..+...|...+..+|.
T Consensus        30 ~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~   62 (247)
T d1jw9b_          30 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDF   62 (247)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECC
T ss_pred             CCCEEEECCCHHHHHHHHHHHHcCCCeEEEECC
Confidence            469999999999999999999999998998873

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=93.97  E-value=0.056  Score=46.03  Aligned_cols=46  Identities=17%  Similarity=0.145  Sum_probs=37.0

Q ss_pred             cCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH
Q 020768          177 ANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK  223 (321)
Q Consensus       177 ~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~  223 (321)
                      .-+.+|++|||+|+ |-+|...+..+...|. .|+++.++.++.+.++
T Consensus         6 ~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~-~V~~~vR~~~~~~~~~   52 (342)
T d1y1pa1           6 AVLPEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQ   52 (342)
T ss_dssp             CSSCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHH
T ss_pred             CCCCCcCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCchhHHHHH
Confidence            34678999999998 9999999988888898 6777777776665543

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=93.95  E-value=0.074  Score=40.33  Aligned_cols=90  Identities=14%  Similarity=0.134  Sum_probs=59.1

Q ss_pred             EEEEEcCChhHHH-HHHHHHHcCCCeEEEEeCChhHHHH-HHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 020768          184 NVLIMGAGPIGLV-TMLGARAFGAPRIVIVDVDDYRLSV-AKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (321)
Q Consensus       184 ~vlI~Gag~vG~~-a~qla~~~g~~~vv~v~~~~~~~~~-~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  261 (321)
                      +|.|+|+|.+|.- .+...+..+.-.+++++.++++.+. +++++......      ++.+    +.   ...+|+|+-|
T Consensus         3 rvgiiG~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~------~~~~----ll---~~~iD~V~I~   69 (167)
T d1xeaa1           3 KIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCT------DYRD----VL---QYGVDAVMIH   69 (167)
T ss_dssp             EEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCS------STTG----GG---GGCCSEEEEC
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccccc------cHHH----hc---ccccceeccc
Confidence            6889999999854 5666655533256677888776664 45677654321      1111    11   1358999999


Q ss_pred             CCCHHHHHHHHHHcccCCEEEEEcCC
Q 020768          262 AGFNKTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       262 ~g~~~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      +....+.+.+..++..|=. +++--+
T Consensus        70 tp~~~H~~~~~~al~~gk~-V~~EKP   94 (167)
T d1xeaa1          70 AATDVHSTLAAFFLHLGIP-TFVDKP   94 (167)
T ss_dssp             SCGGGHHHHHHHHHHTTCC-EEEESC
T ss_pred             ccccccccccccccccccc-cccCCC
Confidence            9988888888888886643 555543

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=93.90  E-value=0.23  Score=40.95  Aligned_cols=94  Identities=19%  Similarity=0.223  Sum_probs=61.1

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcC-CC---------------eEEecCCCcccHHHH
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG-AD---------------NIVKVSTNLQDIAEE  243 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g-~~---------------~vi~~~~~~~~~~~~  243 (321)
                      ...++|||+|+|. |..+-.+++. ....+.+++-+++-.+.++++- ..               .++.     .|..+.
T Consensus        71 ~~p~~vLiiG~G~-G~~~~~~l~~-~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~-----~Da~~~  143 (276)
T d1mjfa_          71 PKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTI-----GDGFEF  143 (276)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEE-----SCHHHH
T ss_pred             CCCceEEEecCCc-hHHHHHHHHh-CCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEE-----ChHHHH
Confidence            4568999998754 3333444554 4457899999999999888643 11               1221     233444


Q ss_pred             HHHHHHHhCCCccEEEEcCCC----------HHHHHHHHHHcccCCEEEEEc
Q 020768          244 VEKIQKAMGTGIDVSFDCAGF----------NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       244 ~~~~~~~~~~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      +++     ...+|+||--...          .+.++.+.+.|+++|.++.-+
T Consensus       144 l~~-----~~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~Gv~v~q~  190 (276)
T d1mjfa_         144 IKN-----NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA  190 (276)
T ss_dssp             HHH-----CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             Hhc-----cCCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCCceEEEec
Confidence            432     4679998753322          246888999999999988765

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.76  E-value=0.098  Score=45.22  Aligned_cols=31  Identities=29%  Similarity=0.446  Sum_probs=27.2

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEe
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVD  213 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~  213 (321)
                      |.+|||+|+ |-+|...+..+...|. .|+++|
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~-~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNY-EVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEe
Confidence            689999999 9999999999999998 688886

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=93.74  E-value=0.35  Score=37.83  Aligned_cols=95  Identities=9%  Similarity=0.061  Sum_probs=64.0

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHH----HHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~----~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      .||=+|+|. |..++.+|+..--..+++++.+......    +++.+.+.+.....+..++.    +.  .....+|.|+
T Consensus        32 lvLeIGcG~-G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~Da~~l~----~~--~~~~~~d~v~  104 (204)
T d2fcaa1          32 IHIEVGTGK-GQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLT----DV--FEPGEVKRVY  104 (204)
T ss_dssp             EEEEECCTT-SHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHH----HH--CCTTSCCEEE
T ss_pred             eEEEEEecC-cHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhcccchhhhh----cc--cCchhhhccc
Confidence            445567755 8888889998755589999999876654    44677776544333322221    11  1245688887


Q ss_pred             EcCCCH--------------HHHHHHHHHcccCCEEEEEc
Q 020768          260 DCAGFN--------------KTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       260 d~~g~~--------------~~~~~~~~~l~~~G~~v~~g  285 (321)
                      -....+              ..+..+.+.|+|||.+.+..
T Consensus       105 i~fp~P~~k~~h~k~Rl~~~~~l~~~~r~LkpgG~l~i~T  144 (204)
T d2fcaa1         105 LNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT  144 (204)
T ss_dssp             EESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred             cccccccchhhhcchhhhHHHHHHHHHHhCCCCcEEEEEE
Confidence            655443              57889999999999998864

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=93.65  E-value=0.11  Score=42.67  Aligned_cols=36  Identities=19%  Similarity=0.216  Sum_probs=26.4

Q ss_pred             EEEEEcC-ChhHHHHHHHHHHcCCCeEEEE-eCChhHHH
Q 020768          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIV-DVDDYRLS  220 (321)
Q Consensus       184 ~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v-~~~~~~~~  220 (321)
                      .+||+|+ +++|...++.+...|++ |+.+ .+++++.+
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga~-V~i~~~~~~~~~~   41 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGYA-VCLHYHRSAAEAN   41 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCE-EEEEeCCCHHHHH
Confidence            3577888 99999999999999995 5554 44444433

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=93.61  E-value=0.17  Score=39.15  Aligned_cols=100  Identities=16%  Similarity=0.231  Sum_probs=62.1

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCC--eEEecCCCcccHHHHHHHH
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGAD--NIVKVSTNLQDIAEEVEKI  247 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~--~vi~~~~~~~~~~~~~~~~  247 (321)
                      ++...+.++++||=+|+|. |..++.+++ .+. .+.+++.++...+.+++    .+..  .+-....   ++.+.    
T Consensus        45 i~~l~~~~~~~VLDiGcG~-G~~~~~la~-~~~-~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~---d~~~~----  114 (194)
T d1dusa_          45 VENVVVDKDDDILDLGCGY-GVIGIALAD-EVK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVHS---DLYEN----  114 (194)
T ss_dssp             HHHCCCCTTCEEEEETCTT-SHHHHHHGG-GSS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEEC---STTTT----
T ss_pred             HHhCCcCCCCeEEEEeecC-ChhHHHHHh-hcc-ccceeeeccccchhHHHHHHHhCCccceEEEEEc---chhhh----
Confidence            3667788999999998743 455555665 344 79999999888777753    3332  1211111   11110    


Q ss_pred             HHHhCCCccEEEEcCC---CH----HHHHHHHHHcccCCEEEEEc
Q 020768          248 QKAMGTGIDVSFDCAG---FN----KTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       248 ~~~~~~~~d~vid~~g---~~----~~~~~~~~~l~~~G~~v~~g  285 (321)
                        .....+|+|+-...   ..    ..++.+.+.|+++|+++++-
T Consensus       115 --~~~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  157 (194)
T d1dusa_         115 --VKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVI  157 (194)
T ss_dssp             --CTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             --hccCCceEEEEcccEEecchhhhhHHHHHHHhcCcCcEEEEEE
Confidence              11457999996321   22    34677889999999987653

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=93.59  E-value=0.92  Score=33.49  Aligned_cols=99  Identities=20%  Similarity=0.194  Sum_probs=65.1

Q ss_pred             CEEEEEcC-ChhHHHHHHHHHHc--CCCeEEEEeCCh--hH-HHHHHHcCCCeEEecCCCcc-cHHH-------------
Q 020768          183 TNVLIMGA-GPIGLVTMLGARAF--GAPRIVIVDVDD--YR-LSVAKELGADNIVKVSTNLQ-DIAE-------------  242 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~~~--g~~~vv~v~~~~--~~-~~~~~~~g~~~vi~~~~~~~-~~~~-------------  242 (321)
                      ++|.|+|+ |.+|..++.+.+..  .+ +|++.....  ++ .+.+++|.+..+...++... .+..             
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~   80 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHF-RVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLS   80 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTE-EEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEE
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCc-EEEEEEecCcHHHHHHHHHHHhhcccccccHHHHHHHHHHhhhhcccccccc
Confidence            36899999 99999999999987  35 455554433  22 34567899888776432211 1111             


Q ss_pred             ---HHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEE
Q 020768          243 ---EVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV  284 (321)
Q Consensus       243 ---~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  284 (321)
                         .+.++  .....+|+|+.+..+-..+...+..++.+=++.+.
T Consensus        81 g~~~l~~~--~~~~~~D~vi~AI~G~aGL~~t~~aik~gk~iaLA  123 (151)
T d1q0qa2          81 GQQAACDM--AALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLA  123 (151)
T ss_dssp             SHHHHHHH--HTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEEC
T ss_pred             ChHHHHHH--hcCCCCCEEEEecCcccHHHHHHHHHhcCCeEEEE
Confidence               11111  11346899999998888889999999887665443

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=93.58  E-value=0.08  Score=43.56  Aligned_cols=95  Identities=19%  Similarity=0.129  Sum_probs=64.7

Q ss_pred             CCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeE-EecCCCcccHHHHHHHHHHHhCCCccE
Q 020768          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI-VKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (321)
Q Consensus       179 ~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~~~~~~~d~  257 (321)
                      ..++.+||=+|+|. |..+..+++...-..++++|.+++..+.+++...... +.-+.  .++        ......+|+
T Consensus        82 ~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~d~--~~l--------~~~~~sfD~  150 (268)
T d1p91a_          82 DDKATAVLDIGCGE-GYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASS--HRL--------PFSDTSMDA  150 (268)
T ss_dssp             CTTCCEEEEETCTT-STTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCT--TSC--------SBCTTCEEE
T ss_pred             CCCCCEEEEeCCCC-cHHHHHHHHHCCCCEEEEecchHhhhhhhhcccccccceeeeh--hhc--------cCCCCCEEE
Confidence            45677888888854 5666677776533379999999999998877543322 21111  111        011456999


Q ss_pred             EEEcCCCHHHHHHHHHHcccCCEEEEEc
Q 020768          258 SFDCAGFNKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       258 vid~~g~~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      |+.... +..++.+.+.|+|||.++...
T Consensus       151 v~~~~~-~~~~~e~~rvLkpgG~l~~~~  177 (268)
T d1p91a_         151 IIRIYA-PCKAEELARVVKPGGWVITAT  177 (268)
T ss_dssp             EEEESC-CCCHHHHHHHEEEEEEEEEEE
T ss_pred             EeecCC-HHHHHHHHHHhCCCcEEEEEe
Confidence            997544 567899999999999998875

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=93.58  E-value=0.17  Score=42.71  Aligned_cols=73  Identities=27%  Similarity=0.349  Sum_probs=43.3

Q ss_pred             EEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeC----ChhHHHHHHHc---CCCeEEecCCCcccHHHHHHHHHHHhCCCc
Q 020768          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV----DDYRLSVAKEL---GADNIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (321)
Q Consensus       184 ~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~----~~~~~~~~~~~---g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~  255 (321)
                      +|||+|+ |-+|...+..+...|. .|+++++    ........+.+   ++.. +..+  -.+.. .+.+..+  ..++
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~D--l~d~~-~l~~~~~--~~~~   74 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGH-DVIILDNLCNSKRSVLPVIERLGGKHPTF-VEGD--IRNEA-LMTEILH--DHAI   74 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCTTHHHHHHHHHTSCCEE-EECC--TTCHH-HHHHHHH--HTTC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcchhhHHHHHhhcCCCCEE-EEee--cCCHH-HHHHHHh--ccCC
Confidence            6999999 9999999999999998 5777753    22222322222   2322 2222  12222 2333222  2579


Q ss_pred             cEEEEcCC
Q 020768          256 DVSFDCAG  263 (321)
Q Consensus       256 d~vid~~g  263 (321)
                      |+||.+++
T Consensus        75 d~ViHlAa   82 (338)
T d1udca_          75 DTVIHFAG   82 (338)
T ss_dssp             SEEEECCS
T ss_pred             CEEEECCC
Confidence            99999875

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=93.54  E-value=0.06  Score=44.26  Aligned_cols=98  Identities=18%  Similarity=0.225  Sum_probs=61.3

Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCe-EEecCCCcccHHHHHHHHHHHhC
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADN-IVKVSTNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~-vi~~~~~~~~~~~~~~~~~~~~~  252 (321)
                      .+++|++||-.+|| +|..++.+|+. |...|++++.+++..+++++    .|.+. +..+..+..++         ...
T Consensus       104 ~~~~g~~VlD~~aG-~G~~~l~~a~~-~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~~~---------~~~  172 (260)
T d2frna1         104 VAKPDELVVDMFAG-IGHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDF---------PGE  172 (260)
T ss_dssp             HCCTTCEEEETTCT-TTTTHHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTC---------CCC
T ss_pred             hcCCccEEEECcce-EcHHHHHHHHh-CCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchHHh---------ccC
Confidence            35899999988762 24444555665 44479999999988887753    35543 32222221111         113


Q ss_pred             CCccEEEE-cC-CCHHHHHHHHHHcccCCEEEEEcC
Q 020768          253 TGIDVSFD-CA-GFNKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       253 ~~~d~vid-~~-g~~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      ..+|.|+- .. .+.+.+..+++.+++||.+..+..
T Consensus       173 ~~~D~Ii~~~p~~~~~~l~~a~~~l~~gG~lh~~~~  208 (260)
T d2frna1         173 NIADRILMGYVVRTHEFIPKALSIAKDGAIIHYHNT  208 (260)
T ss_dssp             SCEEEEEECCCSSGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred             CCCCEEEECCCCchHHHHHHHHhhcCCCCEEEEEec
Confidence            45886654 22 334677889999999999876654

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.53  E-value=0.49  Score=34.86  Aligned_cols=39  Identities=23%  Similarity=0.469  Sum_probs=31.6

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhH
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYR  218 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~  218 (321)
                      ..+.+|.|+|+|.+|..+++.+...+. ..++.+|.++++
T Consensus         4 ~~~~KI~IiGaG~vG~~~a~~l~~~~l~~el~L~Di~~~~   43 (148)
T d1ldna1           4 NGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESK   43 (148)
T ss_dssp             TTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             CCCCeEEEECcCHHHHHHHHHHHhcCCCceEEEEeecccc
Confidence            456789999999999988888887765 458888888766

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.50  E-value=0.17  Score=42.21  Aligned_cols=97  Identities=20%  Similarity=0.188  Sum_probs=64.7

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCC-------C---eEEecCCCcccHHHHHHHHHH
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA-------D---NIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~-------~---~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      ...++|||+|+|. |..+-.+++..+...|.+++-+++-.+.++++-.       +   .++.     .|..+.++    
T Consensus        88 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~-----~Da~~~l~----  157 (295)
T d1inla_          88 PNPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVI-----ANGAEYVR----  157 (295)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE-----SCHHHHGG----
T ss_pred             CCCceEEEecCCc-hHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEh-----hhHHHHHh----
Confidence            3458999998744 4445567777777789999999998888877431       1   1221     23333333    


Q ss_pred             HhCCCccEEEEcCC-----------CHHHHHHHHHHcccCCEEEEEcC
Q 020768          250 AMGTGIDVSFDCAG-----------FNKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       250 ~~~~~~d~vid~~g-----------~~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      .....+|+||--..           +.+.++.+.+.|+++|.++.-..
T Consensus       158 ~~~~~yDvIi~D~~dp~~~~~~~L~t~efy~~~~~~L~~~Gi~v~q~~  205 (295)
T d1inla_         158 KFKNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE  205 (295)
T ss_dssp             GCSSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred             cCCCCCCEEEEcCCCCCcCchhhhccHHHHHHHHhhcCCCcEEEEecC
Confidence            23567999884322           12468889999999999988653

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=93.46  E-value=0.15  Score=41.21  Aligned_cols=34  Identities=32%  Similarity=0.375  Sum_probs=28.4

Q ss_pred             CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChh
Q 020768          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY  217 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~  217 (321)
                      +.|||+|+ +++|.+.++.+...|+ +|+.++++++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga-~V~~~~~~~~   36 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDA   36 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECChH
Confidence            35788998 9999999999999999 6888877653

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=93.42  E-value=0.55  Score=37.34  Aligned_cols=106  Identities=14%  Similarity=0.186  Sum_probs=71.4

Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHH--
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKA--  250 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~~--  250 (321)
                      +....++||-+|. ..|+.++.+|+++. -..++.++.+++..+.++    +.|...-+....  .+..+.+.++...  
T Consensus        56 ~~~~~k~iLEiGT-~~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~--g~a~~~L~~l~~~~~  132 (227)
T d1susa1          56 KLINAKNTMEIGV-YTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFRE--GPALPVLDEMIKDEK  132 (227)
T ss_dssp             HHHTCCEEEEECC-GGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEE--SCHHHHHHHHHHCGG
T ss_pred             HhcCCCcEEEecc-hhhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeee--hHHHHHHHHHHhccc
Confidence            3345689999885 45888888888763 237999999998877665    456654333222  3445555555432  


Q ss_pred             hCCCccEEEEcCCCH---HHHHHHHHHcccCCEEEEEcC
Q 020768          251 MGTGIDVSFDCAGFN---KTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       251 ~~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      ..+.||+||--....   ..++.+++.|++||.++.=..
T Consensus       133 ~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~gGiii~DNv  171 (227)
T d1susa1         133 NHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDNT  171 (227)
T ss_dssp             GTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEETT
T ss_pred             cCCceeEEEeccchhhhHHHHHHHHhhcCCCcEEEEccC
Confidence            245699988643332   467899999999999888664

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=93.42  E-value=0.12  Score=42.65  Aligned_cols=97  Identities=18%  Similarity=0.142  Sum_probs=66.4

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcC-----C--C---eEEecCCCcccHHHHHHHHHH
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG-----A--D---NIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g-----~--~---~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      ...++|||+|+|. |..+..+++..+...+.+++-+++-.+.++++-     +  +   .++.     .|..+.+++   
T Consensus        74 ~~p~~vLiiGgG~-G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~-----~D~~~~l~~---  144 (274)
T d1iy9a_          74 PNPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQV-----DDGFMHIAK---  144 (274)
T ss_dssp             SSCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEE-----SCSHHHHHT---
T ss_pred             CCcceEEecCCCC-cHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEe-----chHHHHHhh---
Confidence            4568999998654 555566677777778999999999988887753     1  1   1221     233333432   


Q ss_pred             HhCCCccEEEEcCC----------CHHHHHHHHHHcccCCEEEEEcC
Q 020768          250 AMGTGIDVSFDCAG----------FNKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       250 ~~~~~~d~vid~~g----------~~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                       ....+|+||--..          +.+.++.+.+.|+++|.++.-..
T Consensus       145 -~~~~yDvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~Gv~v~q~~  190 (274)
T d1iy9a_         145 -SENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTD  190 (274)
T ss_dssp             -CCSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECC
T ss_pred             -cCCCCCEEEEcCCCCCCcchhhccHHHHHHHHhhcCCCceEEEecC
Confidence             3567999975432          23568899999999999988653

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=93.41  E-value=0.15  Score=39.67  Aligned_cols=88  Identities=17%  Similarity=0.092  Sum_probs=54.8

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  261 (321)
                      |.++.|+|.|.+|...+++++.+|. .+++.+............+...   .    .++.+.+.        ..|+|..+
T Consensus        47 g~tvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~~~~---~----~~l~~ll~--------~sD~v~l~  110 (191)
T d1gdha1          47 NKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASSSDEASYQATF---H----DSLDSLLS--------VSQFFSLN  110 (191)
T ss_dssp             TCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCHHHHHHHTCEE---C----SSHHHHHH--------HCSEEEEC
T ss_pred             ccceEEeecccchHHHHHHHHhhcc-ccccccccccccchhhcccccc---c----CCHHHHHh--------hCCeEEec
Confidence            7899999999999999999999999 6888776544333322222211   1    12222221        24777665


Q ss_pred             CCC-HHH---H-HHHHHHcccCCEEEEEc
Q 020768          262 AGF-NKT---M-STALSATRAGGKVCLVG  285 (321)
Q Consensus       262 ~g~-~~~---~-~~~~~~l~~~G~~v~~g  285 (321)
                      ..- +++   + ...++.++++..++.++
T Consensus       111 ~plt~~T~~li~~~~l~~mk~~a~lIN~s  139 (191)
T d1gdha1         111 APSTPETRYFFNKATIKSLPQGAIVVNTA  139 (191)
T ss_dssp             CCCCTTTTTCBSHHHHTTSCTTEEEEECS
T ss_pred             CCCCchHhheecHHHhhCcCCccEEEecC
Confidence            533 211   1 25667777777777776

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

Probab=93.37  E-value=1  Score=36.96  Aligned_cols=106  Identities=17%  Similarity=0.177  Sum_probs=68.7

Q ss_pred             HHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC--hhHHHHHHHcCCCeEEecCC-------------
Q 020768          171 LHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD--DYRLSVAKELGADNIVKVST-------------  235 (321)
Q Consensus       171 ~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~--~~~~~~~~~~g~~~vi~~~~-------------  235 (321)
                      .++++...++++.+|...++|..|.+++..++.+|.+.++++..+  +.+...++.+|++.+.....             
T Consensus        50 ~~a~~~g~~~~~~~vv~assGn~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~ga~v~~~~~~~~~~~~~~~~~~~  129 (302)
T d1fcja_          50 WDAEKRGVLKPGVELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEI  129 (302)
T ss_dssp             HHHHHHTCCCTTCEEEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHH
T ss_pred             HHHHHcCCCCCCceEEEeccccchhHHHHHHHHhccCCceEEeecCcHHHHHHHHHhccceEEeccccccchhhhHHHHH
Confidence            344566677888877766779999999999999999877776543  56777888888875432110             


Q ss_pred             ------------CcccH---H---H-HHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcc
Q 020768          236 ------------NLQDI---A---E-EVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATR  276 (321)
Q Consensus       236 ------------~~~~~---~---~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~  276 (321)
                                  ...+.   .   . ...++.+..+..+|++|-++|+..++.-+...++
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~ti~~Ei~e~~~~~~d~vv~~vG~GG~~~Gi~~~lk  189 (302)
T d1fcja_         130 VASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIK  189 (302)
T ss_dssp             HHTSTTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHH
T ss_pred             HhhhccceeccccccccchhHHHHhHHHHHHHHhcCCCCCEEEEcCCCccccccceeeee
Confidence                        00000   0   0 1123333445568999999998766665555443

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=93.33  E-value=0.55  Score=39.06  Aligned_cols=104  Identities=15%  Similarity=0.130  Sum_probs=68.2

Q ss_pred             HHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC--hhHHHHHHHcCCCeEEecCCCc-------------
Q 020768          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD--DYRLSVAKELGADNIVKVSTNL-------------  237 (321)
Q Consensus       173 ~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~--~~~~~~~~~~g~~~vi~~~~~~-------------  237 (321)
                      +.+...+.++++|+...+|..|.+++..++.+|.+.+|++..+  ..|...++.+|+..+.......             
T Consensus        52 a~~~g~~~~~~~vv~~SsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~vv~~~~~~~~~~~~~~~~~~~~  131 (310)
T d1y7la1          52 AEKDGTLTKGKEIVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVA  131 (310)
T ss_dssp             HHHTTSSCTTCEEEESCCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHH
T ss_pred             HHHcCCCCCCceeeeecCCCchHHHHHHHHHhhccccccchhhhhhhhhhhHHHhCCceEeccCccccchhhHHHHHHHH
Confidence            3345566788777666779999999999999999877777544  5677788899987664311100             


Q ss_pred             ------------cc---HH---H-HHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcc
Q 020768          238 ------------QD---IA---E-EVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATR  276 (321)
Q Consensus       238 ------------~~---~~---~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~  276 (321)
                                  .+   ..   + ...++.+..+..+|.++-++|+..++.-....++
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~a~Ei~~~~~~~~d~vv~~~G~Gg~~~G~~~~lk  189 (310)
T d1y7la1         132 SDPSRYVMLKQFENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIK  189 (310)
T ss_dssp             HCTTTEECCCTTTCTHHHHHHHHTHHHHHHHHTTTCEEEEEEECSSSHHHHHHHHHHH
T ss_pred             hhcCccccCCCCcchhhHHHhhhhHHHHHHHhcCCCCCEEEecCcCCcchhHHHHHHH
Confidence                        00   00   0 1122333345568999999988777766666554

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=93.23  E-value=0.13  Score=39.92  Aligned_cols=94  Identities=18%  Similarity=0.250  Sum_probs=60.3

Q ss_pred             CCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHHhCCC
Q 020768          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       179 ~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~  254 (321)
                      +++ .+||=+|+| .|..+..+++ .|. .|++++-+++.++.++    +.+.+.+.....+..++         .....
T Consensus        29 ~~~-grvLDiGcG-~G~~~~~la~-~g~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~---------~~~~~   95 (198)
T d2i6ga1          29 VAP-GRTLDLGCG-NGRNSLYLAA-NGY-DVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTL---------TFDGE   95 (198)
T ss_dssp             SCS-CEEEEETCT-TSHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTC---------CCCCC
T ss_pred             CCC-CcEEEECCC-CCHHHHHHHH-Hhh-hhccccCcHHHHHHHHHHhhhccccchhhhheecccc---------ccccc
Confidence            344 489989986 6888887776 477 7999999998777654    34554321110110000         01356


Q ss_pred             ccEEEEcC-----CC---HHHHHHHHHHcccCCEEEEEc
Q 020768          255 IDVSFDCA-----GF---NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       255 ~d~vid~~-----g~---~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      ||+|+...     ..   ...+..+.++|+++|.+++..
T Consensus        96 fD~I~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~  134 (198)
T d2i6ga1          96 YDFILSTVVMMFLEAQTIPGLIANMQRCTKPGGYNLIVA  134 (198)
T ss_dssp             EEEEEEESCGGGSCTTHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             ccEEEEeeeeecCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            89998632     11   136778888999999988875

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.22  E-value=0.032  Score=46.59  Aligned_cols=102  Identities=18%  Similarity=0.177  Sum_probs=61.0

Q ss_pred             cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHc----CCCeEE-ecCCCcccHHHHHHHHHHHh
Q 020768          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL----GADNIV-KVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~----g~~~vi-~~~~~~~~~~~~~~~~~~~~  251 (321)
                      .+.+++.+||=+|+|. |..++.+++. |+ .|++++.+++-++.+++.    +..... ...-...++...-..  ...
T Consensus        52 l~~~~~~~vLD~GcG~-G~~~~~la~~-g~-~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  126 (292)
T d1xvaa_          52 LRQHGCHRVLDVACGT-GVDSIMLVEE-GF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKD--VPA  126 (292)
T ss_dssp             HHHTTCCEEEESSCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHH--SCC
T ss_pred             hhhcCCCEEEEecCCC-cHHHHHHHHc-CC-eeeeccCchHHHHHHHHHHHhcccccccceeeeeeccccccccc--cCC
Confidence            3345678998888854 6677777775 77 799999999887777542    211000 000000111111111  112


Q ss_pred             CCCccEEEEcCCC--------------HHHHHHHHHHcccCCEEEE
Q 020768          252 GTGIDVSFDCAGF--------------NKTMSTALSATRAGGKVCL  283 (321)
Q Consensus       252 ~~~~d~vid~~g~--------------~~~~~~~~~~l~~~G~~v~  283 (321)
                      ...+|.|+.....              ...++.+.+.|+|||.+++
T Consensus       127 ~~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~  172 (292)
T d1xvaa_         127 GDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI  172 (292)
T ss_dssp             TTCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred             CCCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEEE
Confidence            4578999864321              1268899999999999876

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.07  E-value=0.12  Score=43.52  Aligned_cols=95  Identities=15%  Similarity=0.234  Sum_probs=55.6

Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHH---HHHHHcCCCe-EEecCCCcccHHHHHHHHHHHhCC
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRL---SVAKELGADN-IVKVSTNLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~---~~~~~~g~~~-vi~~~~~~~~~~~~~~~~~~~~~~  253 (321)
                      .+.+|++||-+|+|. |.+++.+|+ .|++.|++++.++.-.   +.++..+... +.....+..++        .....
T Consensus        30 ~~~~~~~VLDiGcG~-G~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~~~~~--------~~~~~   99 (316)
T d1oria_          30 HLFKDKVVLDVGSGT-GILCMFAAK-AGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEV--------ELPVE   99 (316)
T ss_dssp             HHHTTCEEEEETCTT-SHHHHHHHH-TTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTC--------CCSSS
T ss_pred             ccCCcCEEEEEecCC-cHHHHHHHH-hCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEeccHHHc--------ccccc
Confidence            456899999999864 666666565 6877899999876422   2233445432 22211111111        01135


Q ss_pred             CccEEEEcCCC---------HHHHHHHHHHcccCCEEE
Q 020768          254 GIDVSFDCAGF---------NKTMSTALSATRAGGKVC  282 (321)
Q Consensus       254 ~~d~vid~~g~---------~~~~~~~~~~l~~~G~~v  282 (321)
                      .+|+++.....         +..+...-+.|+++|+++
T Consensus       100 ~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~G~ii  137 (316)
T d1oria_         100 KVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIF  137 (316)
T ss_dssp             CEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             eeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCCeEEE
Confidence            68998752221         134556668999999875

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=92.82  E-value=0.37  Score=40.46  Aligned_cols=103  Identities=13%  Similarity=0.054  Sum_probs=65.8

Q ss_pred             cCCCCCCEEEEEcC--ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCC--CeEEecCCCcccHHHHHHHHH
Q 020768          177 ANIGPETNVLIMGA--GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGA--DNIVKVSTNLQDIAEEVEKIQ  248 (321)
Q Consensus       177 ~~~~~g~~vlI~Ga--g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~--~~vi~~~~~~~~~~~~~~~~~  248 (321)
                      ..+.+|++||=..+  |+.++.+    ...|+..|+.++.+++..+.+++    .|.  +.+-..   ..|..+.++.+.
T Consensus       140 ~~~~~g~~VLdlf~~~G~~sl~a----a~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i---~~d~~~~l~~~~  212 (317)
T d2b78a2         140 NGSAAGKTVLNLFSYTAAFSVAA----AMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLV---VMDVFDYFKYAR  212 (317)
T ss_dssp             HTTTBTCEEEEETCTTTHHHHHH----HHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEE---ESCHHHHHHHHH
T ss_pred             HHhhCCCceeecCCCCcHHHHHH----HhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEE---EccHHHHHHHHH
Confidence            35578999998744  6666432    24677789999999988887763    233  222111   134445555443


Q ss_pred             HHhCCCccEEEEcCCC---------------HHHHHHHHHHcccCCEEEEEcCC
Q 020768          249 KAMGTGIDVSFDCAGF---------------NKTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       249 ~~~~~~~d~vid~~g~---------------~~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      . .+..||+||--.+.               .+.+..++++|++||.++...-+
T Consensus       213 ~-~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pgG~l~~~scs  265 (317)
T d2b78a2         213 R-HHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNA  265 (317)
T ss_dssp             H-TTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             h-hcCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence            3 25679999863331               13677888999999999887643

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=92.81  E-value=0.41  Score=36.23  Aligned_cols=43  Identities=16%  Similarity=0.206  Sum_probs=36.2

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCC
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA  227 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~  227 (321)
                      +|-|+|.|.+|...+.-+...|+ .|.+.++++++.+.+.+.+.
T Consensus         3 kIGvIGlG~MG~~ma~~L~~~G~-~V~~~dr~~~~~~~l~~~~~   45 (178)
T d1pgja2           3 DVGVVGLGVMGANLALNIAEKGF-KVAVFNRTYSKSEEFMKANA   45 (178)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTT
T ss_pred             EEEEEeehHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCC
Confidence            47889999999988888888899 58899999999887766554

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=92.81  E-value=0.17  Score=39.35  Aligned_cols=88  Identities=20%  Similarity=0.286  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      .|.++.|+|.|.+|...++.++.+|+ .|++.+....+. .....+....       .++.+.++        ..|+|.-
T Consensus        48 ~gktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~-~~~~~~~~~~-------~~l~~ll~--------~sD~i~~  110 (193)
T d1mx3a1          48 RGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLSDG-VERALGLQRV-------STLQDLLF--------HSDCVTL  110 (193)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCTT-HHHHHTCEEC-------SSHHHHHH--------HCSEEEE
T ss_pred             eCceEEEeccccccccceeeeecccc-ceeeccCccccc-chhhhccccc-------cchhhccc--------cCCEEEE
Confidence            47899999999999999999999999 688877654332 2223333211       11222111        2466666


Q ss_pred             cCCCH-HH---H-HHHHHHcccCCEEEEEc
Q 020768          261 CAGFN-KT---M-STALSATRAGGKVCLVG  285 (321)
Q Consensus       261 ~~g~~-~~---~-~~~~~~l~~~G~~v~~g  285 (321)
                      +..-. ++   + ...++.++++..++.++
T Consensus       111 ~~plt~~T~~li~~~~l~~mk~~a~lIN~s  140 (193)
T d1mx3a1         111 HCGLNEHNHHLINDFTVKQMRQGAFLVNTA  140 (193)
T ss_dssp             CCCCCTTCTTSBSHHHHTTSCTTEEEEECS
T ss_pred             eecccccchhhhhHHHHhccCCCCeEEecC
Confidence            55432 11   1 24567777777777776

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.78  E-value=0.23  Score=38.27  Aligned_cols=87  Identities=22%  Similarity=0.210  Sum_probs=57.6

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      .|.++.|+|.|.+|...+++++.+|. .|++.++...+... ...+...        .++.+.++        ..|+|+-
T Consensus        43 ~~k~vgiiG~G~IG~~va~~~~~fg~-~v~~~d~~~~~~~~-~~~~~~~--------~~l~ell~--------~sDiv~~  104 (184)
T d1ygya1          43 FGKTVGVVGLGRIGQLVAQRIAAFGA-YVVAYDPYVSPARA-AQLGIEL--------LSLDDLLA--------RADFISV  104 (184)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCHHHH-HHHTCEE--------CCHHHHHH--------HCSEEEE
T ss_pred             cceeeeeccccchhHHHHHHhhhccc-eEEeecCCCChhHH-hhcCcee--------ccHHHHHh--------hCCEEEE
Confidence            46789999999999999999999999 68888776544333 2333321        12222221        2578877


Q ss_pred             cCCCH-HH---H-HHHHHHcccCCEEEEEc
Q 020768          261 CAGFN-KT---M-STALSATRAGGKVCLVG  285 (321)
Q Consensus       261 ~~g~~-~~---~-~~~~~~l~~~G~~v~~g  285 (321)
                      +..-. ++   + ...++.++++..++.++
T Consensus       105 ~~Plt~~T~~lin~~~l~~mk~~a~lIN~s  134 (184)
T d1ygya1         105 HLPKTPETAGLIDKEALAKTKPGVIIVNAA  134 (184)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTTEEEEECS
T ss_pred             cCCCCchhhhhhhHHHHhhhCCCceEEEec
Confidence            65532 21   2 26677888888888877

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=92.66  E-value=0.12  Score=40.03  Aligned_cols=89  Identities=20%  Similarity=0.159  Sum_probs=55.4

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      .+.++.|+|.|.+|...++.++.+|. .|+..+.........+..+.....       +    +.++    -...|+|.-
T Consensus        43 ~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~~~~~~-------~----l~~~----l~~sD~v~~  106 (188)
T d2naca1          43 EAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLTWHA-------T----REDM----YPVCDVVTL  106 (188)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCEECS-------S----HHHH----GGGCSEEEE
T ss_pred             cccceeeccccccchhhhhhhhccCc-eEEEEeeccccccccccccccccC-------C----HHHH----HHhccchhh
Confidence            47799999999999999999999999 688887765444444444432211       1    1111    123566665


Q ss_pred             cCCCHH-----HHHHHHHHcccCCEEEEEc
Q 020768          261 CAGFNK-----TMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       261 ~~g~~~-----~~~~~~~~l~~~G~~v~~g  285 (321)
                      +..-..     .=...++.++++..++.++
T Consensus       107 ~~plt~~T~~li~~~~l~~mk~ga~lIN~a  136 (188)
T d2naca1         107 NCPLHPETEHMINDETLKLFKRGAYIVNTA  136 (188)
T ss_dssp             CSCCCTTTTTCBSHHHHTTSCTTEEEEECS
T ss_pred             cccccccchhhhHHHHHHhCCCCCEEEecC
Confidence            444221     1235566666666666665

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.62  E-value=0.076  Score=42.50  Aligned_cols=74  Identities=22%  Similarity=0.360  Sum_probs=44.3

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHHHcCCCeE-EecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKELGADNI-VKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      +.+|||+|+ |.+|...++.+...|. ..|.++.+++.+......-..... .|+.    +.    .++... -.++|++
T Consensus        14 ~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~----~~----~~~~~~-~~~~d~v   84 (232)
T d2bkaa1          14 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFE----KL----DDYASA-FQGHDVG   84 (232)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGG----GG----GGGGGG-GSSCSEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeeccc----cc----cccccc-ccccccc
Confidence            468999999 9999999998887775 368887776533221111112211 1111    11    111111 3579999


Q ss_pred             EEcCCC
Q 020768          259 FDCAGF  264 (321)
Q Consensus       259 id~~g~  264 (321)
                      +.|+|.
T Consensus        85 i~~~~~   90 (232)
T d2bkaa1          85 FCCLGT   90 (232)
T ss_dssp             EECCCC
T ss_pred             cccccc
Confidence            999886

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=92.59  E-value=0.064  Score=45.60  Aligned_cols=78  Identities=14%  Similarity=0.075  Sum_probs=47.5

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHH-HHHHHcCC---CeEEecCCCcccHHHHHHHHHHHhCCCc
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRL-SVAKELGA---DNIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~-~~~~~~g~---~~vi~~~~~~~~~~~~~~~~~~~~~~~~  255 (321)
                      .+.+|||+|+ |-+|...++.+...|. .|++++++..+. .+.+....   -..+..+-  .+.. .+.++.+  ...+
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl--~d~~-~l~~~~~--~~~~   80 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPTVPSLFETARVADGMQSEIGDI--RDQN-KLLESIR--EFQP   80 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCSSSSCHHHHTTTTTTSEEEECCT--TCHH-HHHHHHH--HHCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCCccHHHHhhhhcccCCeEEEeec--cChH-hhhhhhh--hchh
Confidence            4789999998 9999999999999999 688887765432 22222221   11222111  1222 2222222  3467


Q ss_pred             cEEEEcCCC
Q 020768          256 DVSFDCAGF  264 (321)
Q Consensus       256 d~vid~~g~  264 (321)
                      |+++.+++.
T Consensus        81 ~~v~~~aa~   89 (356)
T d1rkxa_          81 EIVFHMAAQ   89 (356)
T ss_dssp             SEEEECCSC
T ss_pred             hhhhhhhcc
Confidence            899998874

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=92.57  E-value=0.83  Score=34.77  Aligned_cols=99  Identities=18%  Similarity=0.131  Sum_probs=57.7

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEE-eCCh-hHHHHHHHcCCCeEEecCCCcccHHH-------HHHHHHHHhCCC
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIV-DVDD-YRLSVAKELGADNIVKVSTNLQDIAE-------EVEKIQKAMGTG  254 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v-~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~~-------~~~~~~~~~~~~  254 (321)
                      +|.|.|-|-+|...++.+....--.++++ +.++ .....+...+.......+ ....+.+       .+...    ..+
T Consensus         3 KVaINGfGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~g~~~~~----~~~   77 (178)
T d1b7go1           3 NVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQ-SIKKFEESGIPVAGTVEDL----IKT   77 (178)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGG-GHHHHHTTTCCCCCCHHHH----HHH
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCc-cceeccccceecCCchhhh----hhc
Confidence            68899999999999999887643245555 3333 333344444433221111 0000000       01111    125


Q ss_pred             ccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCC
Q 020768          255 IDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       255 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      +|+||||+|.....+.+-..++.+-+++..+..
T Consensus        78 vDiViecTG~f~~~e~a~~hl~~G~KvIi~~~~  110 (178)
T d1b7go1          78 SDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGE  110 (178)
T ss_dssp             CSEEEECCSTTHHHHHHHHHHHTTCEEEECTTS
T ss_pred             CCEEEECCCCcCCHHHHHHHHHcCCEEEEECCC
Confidence            899999999877777777888777677766543

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=92.52  E-value=0.2  Score=35.49  Aligned_cols=42  Identities=17%  Similarity=0.219  Sum_probs=34.8

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~  216 (321)
                      ++.....++++++|.|+|.+|+-.++.++.+|. .+..+...+
T Consensus        14 ~~~l~~~~~~~vvVvGgG~ig~E~A~~l~~~g~-~vt~i~~~~   55 (121)
T d1mo9a2          14 VEELDYEPGSTVVVVGGSKTAVEYGCFFNATGR-RTVMLVRTE   55 (121)
T ss_dssp             HHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred             HHHHhhCCCCEEEEECCCHHHHHHHHHHHhcch-hheEeeccc
Confidence            455677889999999999999999999999998 566666544

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=92.50  E-value=0.061  Score=43.94  Aligned_cols=33  Identities=21%  Similarity=0.484  Sum_probs=29.4

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~  215 (321)
                      +++|+|+|+|..|+.|+..++..|. .|.+++.+
T Consensus         1 ~KkV~IIGaG~aGL~aA~~La~~G~-~V~vlE~~   33 (373)
T d1seza1           1 AKRVAVIGAGVSGLAAAYKLKIHGL-NVTVFEAE   33 (373)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTSC-EEEEECSS
T ss_pred             CCEEEEECcCHHHHHHHHHHHhCCC-CEEEEeCC
Confidence            5789999999999999999999999 68888754

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=92.49  E-value=0.44  Score=40.08  Aligned_cols=35  Identities=14%  Similarity=0.026  Sum_probs=27.1

Q ss_pred             CCEEEEEcC---ChhHHHHHHHHHHcCCCeEEEEeCChh
Q 020768          182 ETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVDDY  217 (321)
Q Consensus       182 g~~vlI~Ga---g~vG~~a~qla~~~g~~~vv~v~~~~~  217 (321)
                      ++..||+|+   .++|...++.+...|+ .|+.+..+.+
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA-~V~i~~~~~~   39 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNV-KIIFGIWPPV   39 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEECGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCC-EEEEEeCchh
Confidence            466789995   3899999999999999 5666655544

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=92.40  E-value=0.1  Score=36.80  Aligned_cols=38  Identities=24%  Similarity=0.532  Sum_probs=31.7

Q ss_pred             CCCC-CEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChh
Q 020768          179 IGPE-TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDY  217 (321)
Q Consensus       179 ~~~g-~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~  217 (321)
                      +.++ .+|.|+|+|-+|.+.++-|+.+|+ .+++.+.+++
T Consensus         7 ~~~~~~kigIlGgGQL~rMla~aA~~lG~-~v~v~d~~~~   45 (111)
T d1kjqa2           7 LRPAATRVMLLGSGELGKEVAIECQRLGV-EVIAVDRYAD   45 (111)
T ss_dssp             TSTTCCEEEEESCSHHHHHHHHHHHTTTC-EEEEEESSTT
T ss_pred             CCCCCCEEEEEeCCHHHHHHHHHHHHCCC-EEEEEcCCCC
Confidence            3444 469999999999999999999999 6788877654

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=92.32  E-value=1.2  Score=35.89  Aligned_cols=40  Identities=18%  Similarity=0.193  Sum_probs=31.0

Q ss_pred             HHHHcCC-CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEe
Q 020768          173 ACRRANI-GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVD  213 (321)
Q Consensus       173 ~l~~~~~-~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~  213 (321)
                      +++.... -.|.+|+|.|-|.+|..+++++...|+ ++++++
T Consensus        26 ~~~~~~~~l~g~~v~IQGfGnVG~~~a~~L~e~Ga-kvvavs   66 (255)
T d1bgva1          26 VMKHENDTLVGKTVALAGFGNVAWGAAKKLAELGA-KAVTLS   66 (255)
T ss_dssp             HHHHTTCCSTTCEEEECCSSHHHHHHHHHHHHHTC-EEEEEE
T ss_pred             HHHhCCCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEe
Confidence            3444333 367899999999999999999999999 565553

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.30  E-value=1.1  Score=32.71  Aligned_cols=96  Identities=20%  Similarity=0.258  Sum_probs=57.7

Q ss_pred             EEEEEcC-ChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHHHcCCCeEEecC--CCcccHHHHHHHHHHHhCCCccEEE
Q 020768          184 NVLIMGA-GPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKELGADNIVKVS--TNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       184 ~vlI~Ga-g~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~~~g~~~vi~~~--~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      +|.|+|| |.+|..++.++...+. +.++.++.++.+.+.+.-...+......  ....+..+.   +     .+.|+|+
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~---~-----~~aDivV   73 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDC---L-----KGCDVVV   73 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHH---H-----TTCSEEE
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEcCCChHHH---h-----CCCCEEE
Confidence            6889997 9999999999988876 5688888876554433222222111100  011222221   1     5689999


Q ss_pred             EcCCCHH---------------HHHHHHHH---cccCCEEEEEcCC
Q 020768          260 DCAGFNK---------------TMSTALSA---TRAGGKVCLVGMG  287 (321)
Q Consensus       260 d~~g~~~---------------~~~~~~~~---l~~~G~~v~~g~~  287 (321)
                      -+.|.+.               .++...+.   -++++.++.++.+
T Consensus        74 itag~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvtNP  119 (144)
T d1mlda1          74 IPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNP  119 (144)
T ss_dssp             ECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSC
T ss_pred             ECCCcCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEecCc
Confidence            9988531               22222222   2778898888744

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=92.27  E-value=0.23  Score=39.27  Aligned_cols=97  Identities=14%  Similarity=0.166  Sum_probs=61.5

Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHH---cCCCeEEEEeCChhHHHHHHHc----CCCeEEecCCCcccHHHHHHHHHHH
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARA---FGAPRIVIVDVDDYRLSVAKEL----GADNIVKVSTNLQDIAEEVEKIQKA  250 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~---~g~~~vv~v~~~~~~~~~~~~~----g~~~vi~~~~~~~~~~~~~~~~~~~  250 (321)
                      .++++.+||=+|+|. |..+..+++.   .++ .++++|.+++-++.+++.    +....+.....  +..    +   .
T Consensus        36 ~~~~~~~vLDlGCGt-G~~~~~l~~~~~~~~~-~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~--d~~----~---~  104 (225)
T d1im8a_          36 FVTADSNVYDLGCSR-GAATLSARRNINQPNV-KIIGIDNSQPMVERCRQHIAAYHSEIPVEILCN--DIR----H---V  104 (225)
T ss_dssp             HCCTTCEEEEESCTT-CHHHHHHHHTCCCSSC-EEEEECSCHHHHHHHHHHHHTSCCSSCEEEECS--CTT----T---C
T ss_pred             hcCCCCEEEEeccch-hhHHHHHHHhhcCCCC-ceEEeCCCHHHHHHHHHHhHhhcccchhhhccc--hhh----c---c
Confidence            368899999999854 5566666664   455 799999999988887652    32221111111  110    0   1


Q ss_pred             hCCCccEEEEcCCC--------HHHHHHHHHHcccCCEEEEEc
Q 020768          251 MGTGIDVSFDCAGF--------NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       251 ~~~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      ....+|+++-...-        ...++.+.+.|+|+|.+++.-
T Consensus       105 ~~~~~d~i~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~li~~~  147 (225)
T d1im8a_         105 EIKNASMVILNFTLQFLPPEDRIALLTKIYEGLNPNGVLVLSE  147 (225)
T ss_dssp             CCCSEEEEEEESCGGGSCGGGHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccccceeeEEeeeccccChhhHHHHHHHHHHhCCCCceeeccc
Confidence            12456766653221        146889999999999999875

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=92.25  E-value=0.083  Score=42.60  Aligned_cols=34  Identities=18%  Similarity=0.312  Sum_probs=29.9

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~  215 (321)
                      ..++|+|+|+|..|++++..+...|. .|++++.+
T Consensus         3 ~~~kV~IiGaG~aGl~~A~~L~~~G~-~v~v~Er~   36 (265)
T d2voua1           3 TTDRIAVVGGSISGLTAALMLRDAGV-DVDVYERS   36 (265)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred             CCCcEEEECcCHHHHHHHHHHHHCCC-CEEEEeCC
Confidence            35789999999999999999999999 68888764

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.24  E-value=0.15  Score=39.63  Aligned_cols=40  Identities=30%  Similarity=0.397  Sum_probs=34.4

Q ss_pred             CEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH
Q 020768          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK  223 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~  223 (321)
                      ++|.|+|+|.+|...++++...|+ .|+..+.+++..+.++
T Consensus         5 kkvaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~a~   44 (192)
T d1f0ya2           5 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQTEDILAKSK   44 (192)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHH
T ss_pred             EEEEEECcCHHHHHHHHHHHhCCC-cEEEEECChHHHHHHH
Confidence            589999999999999999999999 7999999987655443

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=92.17  E-value=0.15  Score=40.62  Aligned_cols=92  Identities=24%  Similarity=0.242  Sum_probs=57.8

Q ss_pred             EEEEEcCChhHHH-HHHHHHHc-CCCeEEEEeCChhHHH-HHHHcCCCe--EEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768          184 NVLIMGAGPIGLV-TMLGARAF-GAPRIVIVDVDDYRLS-VAKELGADN--IVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       184 ~vlI~Gag~vG~~-a~qla~~~-g~~~vv~v~~~~~~~~-~~~~~g~~~--vi~~~~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      +|.|+|+|.+|.. .+...+.. +++.+.++++++++.+ +++++|...  +..++    ++.    ++.  ....+|+|
T Consensus        35 riaiIG~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~----d~~----ell--~~~~iD~V  104 (221)
T d1h6da1          35 GYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYS----NFD----KIA--KDPKIDAV  104 (221)
T ss_dssp             EEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSS----SGG----GGG--GCTTCCEE
T ss_pred             EEEEEcCcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccC----chh----hhc--ccccceee
Confidence            6889999999863 44443433 6644556677777755 556787642  22222    121    111  14578999


Q ss_pred             EEcCCCHHHHHHHHHHcccCCEEEEEcC
Q 020768          259 FDCAGFNKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       259 id~~g~~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      +-++....+.+.+..++..| .=+++--
T Consensus       105 ~I~tp~~~H~~~~~~al~~g-k~v~~EK  131 (221)
T d1h6da1         105 YIILPNSLHAEFAIRAFKAG-KHVMCEK  131 (221)
T ss_dssp             EECSCGGGHHHHHHHHHHTT-CEEEECS
T ss_pred             eeccchhhhhhHHHHhhhcc-hhhhcCC
Confidence            99999888888888888755 4455553

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=92.09  E-value=0.099  Score=40.30  Aligned_cols=37  Identities=30%  Similarity=0.537  Sum_probs=31.9

Q ss_pred             CCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh
Q 020768          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (321)
Q Consensus       179 ~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~  216 (321)
                      ...+++|+|+|+|+.|+.|+..+...|. .|...+.++
T Consensus        40 ~~~~k~V~IIGaGPAGL~AA~~la~~G~-~Vtl~E~~~   76 (179)
T d1ps9a3          40 AVQKKNLAVVGAGPAGLAFAINAAARGH-QVTLFDAHS   76 (179)
T ss_dssp             CSSCCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSS
T ss_pred             CCCCcEEEEECccHHHHHHHHHHHhhcc-ceEEEeccC
Confidence            3456899999999999999999999999 688887654

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.83  E-value=1.2  Score=37.09  Aligned_cols=113  Identities=23%  Similarity=0.202  Sum_probs=71.7

Q ss_pred             HHHHcCCCCCCEEEEE-cCChhHHHHHHHHHHcCCCeEEEEeCC--hhHHHHHHHcCCCeEEecCC--------------
Q 020768          173 ACRRANIGPETNVLIM-GAGPIGLVTMLGARAFGAPRIVIVDVD--DYRLSVAKELGADNIVKVST--------------  235 (321)
Q Consensus       173 ~l~~~~~~~g~~vlI~-Gag~vG~~a~qla~~~g~~~vv~v~~~--~~~~~~~~~~g~~~vi~~~~--------------  235 (321)
                      +.+...++++...+|. .+|..|.+.+..++.+|.+.++++..+  +.|.+.++.+|++.+.....              
T Consensus        55 a~~~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~k~~~i~~~Ga~vi~~~~~~~~~~~~~~~~~~~  134 (320)
T d1z7wa1          55 AEKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEIL  134 (320)
T ss_dssp             HHHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHH
T ss_pred             HHHcCCCCCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhhhhhhhhhhhhccCcceEEeeccccccccchhHHHHH
Confidence            3445566677666665 559999999999999999766666443  67888899999875532110              


Q ss_pred             -------------CcccHH----HHHHHHHHHhCCCccEEEEcCCCHHHHHHHH---HHcccCCEEEEEc
Q 020768          236 -------------NLQDIA----EEVEKIQKAMGTGIDVSFDCAGFNKTMSTAL---SATRAGGKVCLVG  285 (321)
Q Consensus       236 -------------~~~~~~----~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~---~~l~~~G~~v~~g  285 (321)
                                   +..++.    ....++.++....+|.++-++|+..++.-+.   +...+.-+++-+-
T Consensus       135 ~~~~~~~~~~~~~~~~n~~~g~~t~~~EI~~q~~~~~D~vv~~vGgGg~~~Gi~~~~k~~~~~~~~igve  204 (320)
T d1z7wa1         135 AKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVE  204 (320)
T ss_dssp             HHCTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             HhCCCceecccccccchHHHhhhhHHHHHHHhccCCCCEEEeCCCCCcccchhhhhhhhhhcceeeeccc
Confidence                         000011    1122333344567899999999876655444   4455666766553

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.73  E-value=0.24  Score=36.59  Aligned_cols=32  Identities=22%  Similarity=0.603  Sum_probs=27.8

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEe
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVD  213 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~  213 (321)
                      .|.++||+|+|.+|..-+..+...|+ .|.+++
T Consensus        12 ~gkrvLViGgG~va~~ka~~Ll~~GA-~VtVva   43 (150)
T d1kyqa1          12 KDKRILLIGGGEVGLTRLYKLMPTGC-KLTLVS   43 (150)
T ss_dssp             TTCEEEEEEESHHHHHHHHHHGGGTC-EEEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEe
Confidence            58899999999999999999999999 565553

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=91.73  E-value=1.1  Score=32.81  Aligned_cols=97  Identities=11%  Similarity=0.110  Sum_probs=58.4

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhH-HHHHHH---cCCCeEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYR-LSVAKE---LGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~-~~~~~~---~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      +-++++|.|.|.+|...++.+...|.+ +++++.++++ .+.+++   .|.. ++.-+.  .+ .+.+++   .+-..+|
T Consensus         2 ~knHiII~G~g~~g~~l~~~L~~~~~~-v~vId~d~~~~~~~~~~~~~~~~~-vi~Gd~--~d-~~~L~~---a~i~~a~   73 (153)
T d1id1a_           2 RKDHFIVCGHSILAINTILQLNQRGQN-VTVISNLPEDDIKQLEQRLGDNAD-VIPGDS--ND-SSVLKK---AGIDRCR   73 (153)
T ss_dssp             CCSCEEEECCSHHHHHHHHHHHHTTCC-EEEEECCCHHHHHHHHHHHCTTCE-EEESCT--TS-HHHHHH---HTTTTCS
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCC-EEEEeccchhHHHHHHHhhcCCcE-EEEccC--cc-hHHHHH---hccccCC
Confidence            346899999999999999999999984 7777777654 233333   3443 332221  12 223333   2345689


Q ss_pred             EEEEcCCCHHH-HH--HHHHHcccCCEEEEEc
Q 020768          257 VSFDCAGFNKT-MS--TALSATRAGGKVCLVG  285 (321)
Q Consensus       257 ~vid~~g~~~~-~~--~~~~~l~~~G~~v~~g  285 (321)
                      .++-+++++.. ..  ...+-+.+.-+++...
T Consensus        74 ~vi~~~~~d~~n~~~~~~~r~~~~~~~iia~~  105 (153)
T d1id1a_          74 AILALSDNDADNAFVVLSAKDMSSDVKTVLAV  105 (153)
T ss_dssp             EEEECSSCHHHHHHHHHHHHHHTSSSCEEEEC
T ss_pred             EEEEccccHHHHHHHHHHHHHhCCCCceEEEE
Confidence            99999887542 11  2223455565655544

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.70  E-value=0.61  Score=36.85  Aligned_cols=108  Identities=19%  Similarity=0.216  Sum_probs=70.7

Q ss_pred             cCCCCCCEEEEEcCChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768          177 ANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      .+....++||=+|. ..|+.++.+|+.+. -..+++++.+++..+.++    +.|....+....  .+..+.+.++....
T Consensus        55 ~~~~~~k~vLEiGt-~~GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~--Gda~e~l~~~~~~~  131 (219)
T d2avda1          55 ARLIQAKKALDLGT-FTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRL--KPALETLDELLAAG  131 (219)
T ss_dssp             HHHTTCCEEEEECC-TTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEE--SCHHHHHHHHHHTT
T ss_pred             HHccCCCeEEEEec-hhhHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEEEE--eehhhcchhhhhhc
Confidence            44456789999986 34777888888753 237999999998866655    456544333222  34445554443322


Q ss_pred             -CCCccEEEEcCCCH---HHHHHHHHHcccCCEEEEEcCC
Q 020768          252 -GTGIDVSFDCAGFN---KTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       252 -~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                       ...+|+||--....   ..++.+++.|++||.++.=...
T Consensus       132 ~~~~fD~ifiD~dk~~y~~~~~~~~~lL~~GGvii~Dn~l  171 (219)
T d2avda1         132 EAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLRVL  171 (219)
T ss_dssp             CTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEECCS
T ss_pred             ccCCccEEEEeCCHHHHHHHHHHHHHHhcCCcEEEEeCCc
Confidence             34689888654432   3578999999999999886643

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.68  E-value=0.47  Score=39.91  Aligned_cols=31  Identities=32%  Similarity=0.375  Sum_probs=25.8

Q ss_pred             CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeC
Q 020768          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV  214 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~  214 (321)
                      +.|||+|+ |-+|...+..+...|. .|++++.
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~-~V~~~d~   33 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGY-DCVVADN   33 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-eEEEEEC
Confidence            46899999 9999999988888898 5777753

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=91.61  E-value=0.72  Score=30.75  Aligned_cols=47  Identities=19%  Similarity=0.345  Sum_probs=36.6

Q ss_pred             CEEEEEcCChhHHHH-HHHHHHcCCCeEEEEeCCh-hHHHHHHHcCCCeE
Q 020768          183 TNVLIMGAGPIGLVT-MLGARAFGAPRIVIVDVDD-YRLSVAKELGADNI  230 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a-~qla~~~g~~~vv~v~~~~-~~~~~~~~~g~~~v  230 (321)
                      .+|-++|-|++|+.+ +++++..|+ .|.+.|..+ +..+.++++|+...
T Consensus         2 ~~ihfiGIgG~GMs~LA~~L~~~G~-~VsGSD~~~~~~t~~L~~~Gi~i~   50 (89)
T d1j6ua1           2 MKIHFVGIGGIGMSAVALHEFSNGN-DVYGSNIEETERTAYLRKLGIPIF   50 (89)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTCCEE
T ss_pred             cEEEEEeECHHHHHHHHHHHHhCCC-eEEEEeCCCChhHHHHHHCCCeEE
Confidence            357777999999866 588889999 799988775 55667889998653

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=91.44  E-value=0.48  Score=35.34  Aligned_cols=87  Identities=10%  Similarity=0.035  Sum_probs=56.6

Q ss_pred             EEEEEcCChhHHH-HHHHHHHc-CCCeEEEEeCChhHH-HHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          184 NVLIMGAGPIGLV-TMLGARAF-GAPRIVIVDVDDYRL-SVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       184 ~vlI~Gag~vG~~-a~qla~~~-g~~~vv~v~~~~~~~-~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      +|.|+|+|.+|.- .+...+.. +++.+.+++.+.++. +++++++...   + +   +    ..++.    ..+|+|+.
T Consensus         3 ri~iIG~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~---~-~---~----~~~l~----~~~D~V~I   67 (164)
T d1tlta1           3 RIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPY---A-D---S----LSSLA----ASCDAVFV   67 (164)
T ss_dssp             EEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCB---C-S---S----HHHHH----TTCSEEEE
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccc---c-c---c----chhhh----hhcccccc
Confidence            5889999999864 56666654 664444566666554 4556787652   1 1   1    11221    35899999


Q ss_pred             cCCCHHHHHHHHHHcccCCEEEEEcC
Q 020768          261 CAGFNKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      |+....+++.+..+|..+=. +++--
T Consensus        68 ~tp~~~h~~~~~~al~~gk~-V~~EK   92 (164)
T d1tlta1          68 HSSTASHFDVVSTLLNAGVH-VCVDK   92 (164)
T ss_dssp             CSCTTHHHHHHHHHHHTTCE-EEEES
T ss_pred             cccchhccccccccccccce-eeccc
Confidence            99988888888888877644 55543

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=91.42  E-value=0.45  Score=38.01  Aligned_cols=95  Identities=7%  Similarity=0.039  Sum_probs=59.1

Q ss_pred             CEEEEEcCCh----hHHHHHHHHHHc--CCCeEEEEeCChhHHH-HHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCc
Q 020768          183 TNVLIMGAGP----IGLVTMLGARAF--GAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (321)
Q Consensus       183 ~~vlI~Gag~----vG~~a~qla~~~--g~~~vv~v~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~  255 (321)
                      =+|.|+|+|.    ++...+...+..  +++.+.+.+.+.++.+ ++++++......++    ++.+    +.+  ...+
T Consensus        17 irvgiIG~G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~~~~~~~~~~~~~~----~~~~----l~~--~~~i   86 (237)
T d2nvwa1          17 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFD----SLES----FAQ--YKDI   86 (237)
T ss_dssp             EEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEES----CHHH----HHH--CTTC
T ss_pred             eEEEEEecCccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHHHHhcccccceeec----chhh----ccc--cccc
Confidence            3789999865    344444444443  4543445667666644 56778865433332    2222    222  4679


Q ss_pred             cEEEEcCCCHHHHHHHHHHcccC-----CEEEEEcCC
Q 020768          256 DVSFDCAGFNKTMSTALSATRAG-----GKVCLVGMG  287 (321)
Q Consensus       256 d~vid~~g~~~~~~~~~~~l~~~-----G~~v~~g~~  287 (321)
                      |+|+.|+....+++.+..+|..|     +.=+++--+
T Consensus        87 D~V~i~tp~~~h~~~~~~al~aG~~~~~~k~V~~EKP  123 (237)
T d2nvwa1          87 DMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWA  123 (237)
T ss_dssp             SEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESS
T ss_pred             ceeeccCCCcchhhHHHHHHHhcccccCCceEEEecc
Confidence            99999999888888888888754     455666644

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=91.26  E-value=0.38  Score=39.25  Aligned_cols=32  Identities=28%  Similarity=0.434  Sum_probs=26.5

Q ss_pred             CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCC
Q 020768          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD  215 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~  215 (321)
                      .+|||+|+ |.+|...+..+...|.+ |+++.++
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~-V~~~~R~   36 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHP-TYVLFRP   36 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCC-EEEECCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCE-EEEEECC
Confidence            56999998 99999999988889985 6666554

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.21  E-value=0.26  Score=41.60  Aligned_cols=96  Identities=19%  Similarity=0.277  Sum_probs=54.3

Q ss_pred             cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhH---HHHHHHcCCCe-EEecCCCcccHHHHHHHHHHHhC
Q 020768          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYR---LSVAKELGADN-IVKVSTNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~---~~~~~~~g~~~-vi~~~~~~~~~~~~~~~~~~~~~  252 (321)
                      ....+|++||-+|+|. |.+++.+|+ .|++.|++++.++.-   .+..++.+... +.....+..+.       . ...
T Consensus        34 ~~~~~~~~VLDlGcGt-G~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~~~~~~~i~~i~~~~~~l-------~-~~~  103 (328)
T d1g6q1_          34 KDLFKDKIVLDVGCGT-GILSMFAAK-HGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDV-------H-LPF  103 (328)
T ss_dssp             HHHHTTCEEEEETCTT-SHHHHHHHH-TCCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTS-------C-CSS
T ss_pred             cccCCcCEEEEeCCCC-CHHHHHHHH-hCCCEEEEEeCCHHHHHHHHHHHHhCccccceEEEeehhhc-------c-Ccc
Confidence            3456789999999863 566654444 688789999988521   22334455432 22222221111       0 113


Q ss_pred             CCccEEEEcCC-----C---H-HHHHHHHHHcccCCEEE
Q 020768          253 TGIDVSFDCAG-----F---N-KTMSTALSATRAGGKVC  282 (321)
Q Consensus       253 ~~~d~vid~~g-----~---~-~~~~~~~~~l~~~G~~v  282 (321)
                      ..+|+|+...-     .   . ..+...-+.|+|+|+++
T Consensus       104 ~~~D~i~se~~~~~~~~e~~~~~~~~a~~r~LkpgG~ii  142 (328)
T d1g6q1_         104 PKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF  142 (328)
T ss_dssp             SCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             cceeEEEEEecceeeccchhHHHHHHHHHhccCCCeEEE
Confidence            56899876321     1   1 23445558899999874

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=91.18  E-value=0.42  Score=33.93  Aligned_cols=40  Identities=23%  Similarity=0.416  Sum_probs=32.2

Q ss_pred             HcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh
Q 020768          176 RANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (321)
Q Consensus       176 ~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~  216 (321)
                      ...-..+++|+|+|+|.+|+-+++.+..+|. .|..++..+
T Consensus        24 ~~~~~~~k~vvViGgG~iG~E~A~~l~~~g~-~Vtlie~~~   63 (123)
T d1nhpa2          24 KTVDPEVNNVVVIGSGYIGIEAAEAFAKAGK-KVTVIDILD   63 (123)
T ss_dssp             HHTCTTCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             HhhccCCCEEEEECChHHHHHHHHHhhccce-EEEEEEecC
Confidence            3444567899999999999999999999999 566676554

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=90.99  E-value=0.24  Score=42.02  Aligned_cols=76  Identities=18%  Similarity=0.238  Sum_probs=45.4

Q ss_pred             CCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       180 ~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      ..+.+|||+|+ |-+|...+..+...|. .|++++...... .............+  ..+...... .    -.++|.|
T Consensus        13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~-~V~~~d~~~~~~-~~~~~~~~~~~~~D--~~~~~~~~~-~----~~~~d~V   83 (363)
T d2c5aa1          13 SENLKISITGAGGFIASHIARRLKHEGH-YVIASDWKKNEH-MTEDMFCDEFHLVD--LRVMENCLK-V----TEGVDHV   83 (363)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCSS-SCGGGTCSEEEECC--TTSHHHHHH-H----HTTCSEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCCccc-hhhhcccCcEEEee--chhHHHHHH-H----hhcCCeE
Confidence            34678999998 9999999999999998 677776543321 11122222222222  123222222 2    1478999


Q ss_pred             EEcCCC
Q 020768          259 FDCAGF  264 (321)
Q Consensus       259 id~~g~  264 (321)
                      +.+++.
T Consensus        84 ih~a~~   89 (363)
T d2c5aa1          84 FNLAAD   89 (363)
T ss_dssp             EECCCC
T ss_pred             eecccc
Confidence            987743

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=90.94  E-value=2  Score=30.93  Aligned_cols=30  Identities=23%  Similarity=0.272  Sum_probs=21.5

Q ss_pred             EEEEEcC-ChhHHHHHHHHHH-cCCCeEEEEe
Q 020768          184 NVLIMGA-GPIGLVTMLGARA-FGAPRIVIVD  213 (321)
Q Consensus       184 ~vlI~Ga-g~vG~~a~qla~~-~g~~~vv~v~  213 (321)
                      +|.|.|+ |-+|...++.... .++..+.+++
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d   32 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELD   32 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEEC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence            5889998 9999998888765 4553333343

>d1ixka_ c.66.1.38 (A:) Hypothetical methyltransferase PH1374 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Hypothetical methyltransferase PH1374
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=90.78  E-value=0.64  Score=38.87  Aligned_cols=100  Identities=22%  Similarity=0.274  Sum_probs=62.9

Q ss_pred             HHcCCCCCCEEEEE-cC-ChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHH----HHcCCCeEEecCCCcccHHHHHHHH
Q 020768          175 RRANIGPETNVLIM-GA-GPIGLVTMLGARAFG-APRIVIVDVDDYRLSVA----KELGADNIVKVSTNLQDIAEEVEKI  247 (321)
Q Consensus       175 ~~~~~~~g~~vlI~-Ga-g~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~----~~~g~~~vi~~~~~~~~~~~~~~~~  247 (321)
                      .....++|++||=. .| |+--.   +++..++ -..+++.+.+++|...+    +++|...++....+...+.      
T Consensus       110 ~~l~~~~g~~vlD~CAapGgKt~---~l~~~~~~~~~i~a~d~~~~r~~~l~~~~~r~~~~~i~~~~~d~~~~~------  180 (313)
T d1ixka_         110 VALDPKPGEIVADMAAAPGGKTS---YLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIG------  180 (313)
T ss_dssp             HHHCCCTTCEEEECCSSCSHHHH---HHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGG------
T ss_pred             hcccCCccceeeecccchhhhhH---hhhhhcccccceeeeccCHHHHHHHHHHHHHHHhhccccccccccccc------
Confidence            34577999988765 33 54433   3444433 22688999999887654    5688876665544322211      


Q ss_pred             HHHhCCCccEEEE---cCCCH-------------------------HHHHHHHHHcccCCEEEEEc
Q 020768          248 QKAMGTGIDVSFD---CAGFN-------------------------KTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       248 ~~~~~~~~d~vid---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g  285 (321)
                        .....||.|+-   |+|..                         +.+..+++.+++||+++..-
T Consensus       181 --~~~~~fD~ILvDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lk~gG~lVYsT  244 (313)
T d1ixka_         181 --ELNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYST  244 (313)
T ss_dssp             --GGCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             --cccccccEEEEccccccCCceeeccchhhhhhhhHHHHHHHHHHHHHHhhhheeCCCcEEEEee
Confidence              12456887765   66653                         25788999999999865543

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=90.69  E-value=0.2  Score=38.28  Aligned_cols=41  Identities=17%  Similarity=0.196  Sum_probs=32.0

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA  222 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~  222 (321)
                      -.|++|||+|+|+++.+++..+...|  .+.++.++.+|.+.+
T Consensus        16 ~~~k~vlIlGaGG~arai~~aL~~~~--~i~I~nR~~~ka~~l   56 (177)
T d1nvta1          16 VKDKNIVIYGAGGAARAVAFELAKDN--NIIIANRTVEKAEAL   56 (177)
T ss_dssp             CCSCEEEEECCSHHHHHHHHHHTSSS--EEEEECSSHHHHHHH
T ss_pred             cCCCEEEEECCcHHHHHHHHHHcccc--ceeeehhhhhHHHHH
Confidence            46789999999999998877765444  688888887776643

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=90.60  E-value=0.35  Score=40.32  Aligned_cols=32  Identities=19%  Similarity=-0.022  Sum_probs=27.8

Q ss_pred             CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCC
Q 020768          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD  215 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~  215 (321)
                      .++||+|+ |-+|...+..+...|. .|+++++.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~-~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGY-EVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcC-EEEEEECC
Confidence            47899999 9999999999999999 68888763

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=90.54  E-value=0.56  Score=34.49  Aligned_cols=38  Identities=16%  Similarity=0.152  Sum_probs=29.1

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA  222 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~  222 (321)
                      +|.|+|.|.+|...+.-+...|. .+++.+.++++....
T Consensus         2 kIgiIG~G~mG~~ia~~l~~~g~-~v~~~~~~~~~~~~~   39 (152)
T d1i36a2           2 RVGFIGFGEVAQTLASRLRSRGV-EVVTSLEGRSPSTIE   39 (152)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTC-EEEECCTTCCHHHHH
T ss_pred             EEEEEcHHHHHHHHHHHHHHCCC-eEEEEcCchhHHHHH
Confidence            57889999999999999998998 567766555444433

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.53  E-value=0.15  Score=41.20  Aligned_cols=33  Identities=27%  Similarity=0.488  Sum_probs=28.6

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~  216 (321)
                      .|+|+|+|..|+.++.+++..|...|.+++.++
T Consensus         3 ~V~IvGaG~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            689999999999999999999976677777654

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=90.51  E-value=0.12  Score=41.09  Aligned_cols=33  Identities=24%  Similarity=0.482  Sum_probs=28.2

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~  216 (321)
                      +|+|+|+|..|+.++..++..|.+.|.+++.++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECCcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            589999999999999999999975588887654

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=90.43  E-value=0.31  Score=40.84  Aligned_cols=74  Identities=18%  Similarity=0.060  Sum_probs=43.9

Q ss_pred             EEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecC-CCcccHHHHHHHHHHHhCCCccEEEEc
Q 020768          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (321)
Q Consensus       184 ~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~-~~~~~~~~~~~~~~~~~~~~~d~vid~  261 (321)
                      +|||+|+ |-+|...++.+...|...|++++....+...+.+..--..+..+ ....++.+   ...    .++|+|+-+
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~---~~~----~~~d~Vih~   74 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIE---YHV----KKCDVVLPL   74 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHH---HHH----HHCSEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHH---HHH----hCCCccccc
Confidence            6999999 99999999888788854688887765544333221111122221 11122222   121    258999998


Q ss_pred             CCC
Q 020768          262 AGF  264 (321)
Q Consensus       262 ~g~  264 (321)
                      ++-
T Consensus        75 a~~   77 (342)
T d2blla1          75 VAI   77 (342)
T ss_dssp             BCC
T ss_pred             ccc
Confidence            874

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=90.38  E-value=0.097  Score=38.87  Aligned_cols=83  Identities=11%  Similarity=-0.001  Sum_probs=49.3

Q ss_pred             EEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCH
Q 020768          186 LIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFN  265 (321)
Q Consensus       186 lI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~  265 (321)
                      -++|+|.+|...+..++. +.....+.+++.++.+.+.+.+.....+..+               .-...|+||-|+.. 
T Consensus         3 gfIG~G~mg~~l~~~L~~-~~~~~~v~~R~~~~~~~l~~~~~~~~~~~~~---------------~~~~~DiVil~v~d-   65 (153)
T d2i76a2           3 NFVGTGTLTRFFLECLKD-RYEIGYILSRSIDRARNLAEVYGGKAATLEK---------------HPELNGVVFVIVPD-   65 (153)
T ss_dssp             EEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCCCCSSCC---------------CCC---CEEECSCT-
T ss_pred             EEEeCcHHHHHHHHHHHh-CCCEEEEEeCChhhhcchhhcccccccchhh---------------hhccCcEEEEeccc-
Confidence            467999999988776654 3333446778888888776655433222111               02446999999986 


Q ss_pred             HHHHHHHHHcccCCE-EEEEc
Q 020768          266 KTMSTALSATRAGGK-VCLVG  285 (321)
Q Consensus       266 ~~~~~~~~~l~~~G~-~v~~g  285 (321)
                      +.+....+-++..++ ++.++
T Consensus        66 ~~i~~v~~~l~~~~~ivi~~s   86 (153)
T d2i76a2          66 RYIKTVANHLNLGDAVLVHCS   86 (153)
T ss_dssp             TTHHHHHTTTCCSSCCEEECC
T ss_pred             hhhhHHHhhhcccceeeeecc
Confidence            566777777765444 34444

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=90.37  E-value=0.12  Score=33.94  Aligned_cols=34  Identities=21%  Similarity=0.387  Sum_probs=29.1

Q ss_pred             CEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChh
Q 020768          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDY  217 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~  217 (321)
                      ++|.|+|+|-+|.+.++-++.+|. .+.+.+.+++
T Consensus         2 k~vgIlG~GQLgrMl~~Aa~~LG~-~v~vldp~~~   35 (78)
T d3etja2           2 KQVCVLGNGQLGRMLRQAGEPLGI-AVWPVGLDAE   35 (78)
T ss_dssp             EEEEEEBCSHHHHHHHHHHGGGTE-EEEEECTTSC
T ss_pred             CEEEEEcCCHHHHHHHHHHHHcCC-EEEEEcCCCC
Confidence            478999999999999999999999 5777766543

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=90.27  E-value=0.43  Score=38.61  Aligned_cols=32  Identities=22%  Similarity=0.399  Sum_probs=27.2

Q ss_pred             CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCC
Q 020768          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD  215 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~  215 (321)
                      .+|||+|+ |.+|...+..+...|. .|++++++
T Consensus         4 kKILVtGatG~iG~~l~~~L~~~G~-~V~~l~R~   36 (307)
T d1qyca_           4 SRILLIGATGYIGRHVAKASLDLGH-PTFLLVRE   36 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC-eEEEEECC
Confidence            57999999 9999999999988998 57776654

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.22  E-value=0.21  Score=39.37  Aligned_cols=98  Identities=19%  Similarity=0.110  Sum_probs=62.5

Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCC----CeEEecCCCcccHHHHHHHHHHHhCC
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA----DNIVKVSTNLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~----~~vi~~~~~~~~~~~~~~~~~~~~~~  253 (321)
                      ...++.+||=+|+|. |..+..+++..+. .|.+++.+++-.+.+++.-.    ..+-....+..+       +. ....
T Consensus        57 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~d~~~-------~~-~~~~  126 (222)
T d2ex4a1          57 NKTGTSCALDCGAGI-GRITKRLLLPLFR-EVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQD-------FT-PEPD  126 (222)
T ss_dssp             -CCCCSEEEEETCTT-THHHHHTTTTTCS-EEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGG-------CC-CCSS
T ss_pred             CCCCCCEEEEeccCC-CHhhHHHHHhcCC-EEEEeecCHHHhhccccccccccccccccccccccc-------cc-cccc
Confidence            456778899888854 6666676655554 79999999999888876422    221111111111       10 1145


Q ss_pred             CccEEEEc-----CCCH---HHHHHHHHHcccCCEEEEEc
Q 020768          254 GIDVSFDC-----AGFN---KTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       254 ~~d~vid~-----~g~~---~~~~~~~~~l~~~G~~v~~g  285 (321)
                      .+|+|+..     ...+   ..+..+.+.|+++|.+++.-
T Consensus       127 ~fD~I~~~~~l~h~~~~~~~~~l~~i~~~Lk~~G~~~i~~  166 (222)
T d2ex4a1         127 SYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKD  166 (222)
T ss_dssp             CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccccccccccccchhhhhhhHHHHHHHhcCCcceEEEEE
Confidence            68999873     2322   36788899999999998874

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=90.19  E-value=0.22  Score=40.24  Aligned_cols=98  Identities=18%  Similarity=0.213  Sum_probs=59.9

Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCC-eEEecCCCcccHHHHHHHHHHHhC
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGAD-NIVKVSTNLQDIAEEVEKIQKAMG  252 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~-~vi~~~~~~~~~~~~~~~~~~~~~  252 (321)
                      -++++++||=+|+|. |..+..+++. |...++++|.+++.++.+++    .+.. .+.....+...      . .....
T Consensus        21 ~~~~~~~VLDlGCG~-G~~~~~~~~~-~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~------~-~~~~~   91 (252)
T d1ri5a_          21 YTKRGDSVLDLGCGK-GGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYG------R-HMDLG   91 (252)
T ss_dssp             HCCTTCEEEEETCTT-TTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTT------S-CCCCS
T ss_pred             hCCCcCEEEEecccC-cHHHHHHHHc-CCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhh------h-ccccc
Confidence            357899999999865 4455666665 54479999999998887764    3322 22111111000      0 00014


Q ss_pred             CCccEEEEcCCC------H----HHHHHHHHHcccCCEEEEE
Q 020768          253 TGIDVSFDCAGF------N----KTMSTALSATRAGGKVCLV  284 (321)
Q Consensus       253 ~~~d~vid~~g~------~----~~~~~~~~~l~~~G~~v~~  284 (321)
                      ..+|+|+....-      .    ..+..+.+.|++||.++..
T Consensus        92 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~gG~~i~~  133 (252)
T d1ri5a_          92 KEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT  133 (252)
T ss_dssp             SCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             ccceEEEEcceeeecCCCHHHHHHHHHHHhceeCCCCEEEEE
Confidence            569999864321      1    2566777899999998763

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=90.19  E-value=0.17  Score=40.64  Aligned_cols=91  Identities=16%  Similarity=0.153  Sum_probs=57.7

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHhCCCc
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~  255 (321)
                      .++++||=+|+|. |..+..+++ .|. .++++|.+++-++.+++    .+...-+. ..+..+       +  .....|
T Consensus        36 ~~~~~vLDiGCG~-G~~~~~l~~-~g~-~v~GvD~S~~ml~~A~~~~~~~~~~v~~~-~~d~~~-------~--~~~~~f  102 (246)
T d1y8ca_          36 LVFDDYLDLACGT-GNLTENLCP-KFK-NTWAVDLSQEMLSEAENKFRSQGLKPRLA-CQDISN-------L--NINRKF  102 (246)
T ss_dssp             CCTTEEEEETCTT-STTHHHHGG-GSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEE-CCCGGG-------C--CCSCCE
T ss_pred             CCCCeEEEEeCcC-CHHHHHHHH-hCC-ccEeeccchhhhhhccccccccCccceee-ccchhh-------h--cccccc
Confidence            4457899899863 566666665 466 79999999988777654    34322111 111111       1  114579


Q ss_pred             cEEEEcCCC------H----HHHHHHHHHcccCCEEEE
Q 020768          256 DVSFDCAGF------N----KTMSTALSATRAGGKVCL  283 (321)
Q Consensus       256 d~vid~~g~------~----~~~~~~~~~l~~~G~~v~  283 (321)
                      |+|+...+.      .    ..++.+.+.|++||.+++
T Consensus       103 D~i~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~~i~  140 (246)
T d1y8ca_         103 DLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIF  140 (246)
T ss_dssp             EEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred             cccceeeeeeeccCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence            999864221      1    257788899999999875

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=90.18  E-value=0.19  Score=40.03  Aligned_cols=37  Identities=27%  Similarity=0.365  Sum_probs=31.5

Q ss_pred             CCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh
Q 020768          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (321)
Q Consensus       179 ~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~  216 (321)
                      .+.+++|+|+|+|..|+.++..++..|. .|.+++.++
T Consensus        46 ~~~~k~VvIIGaGpAGl~aA~~l~~~G~-~v~l~E~~~   82 (233)
T d1djqa3          46 TKNKDSVLIVGAGPSGSEAARVLMESGY-TVHLTDTAE   82 (233)
T ss_dssp             CSSCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             ccCCceEEEEcccHHHHHHHHHHHHhcc-ceeeEeecc
Confidence            3567899999999999999999999999 577776554

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=90.09  E-value=0.29  Score=34.56  Aligned_cols=38  Identities=21%  Similarity=0.283  Sum_probs=31.5

Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~  216 (321)
                      .++..++|+|.|+|.+|.-+++.++.+|. .|..+.+++
T Consensus        18 ~l~~p~~v~IiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~   55 (117)
T d1onfa2          18 NIKESKKIGIVGSGYIAVELINVIKRLGI-DSYIFARGN   55 (117)
T ss_dssp             TCCCCSEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSS
T ss_pred             ccCCCCEEEEECCchHHHHHHHHHHhccc-cceeeehhc
Confidence            45567899999999999999999999998 566676544

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=90.03  E-value=0.16  Score=42.01  Aligned_cols=37  Identities=22%  Similarity=0.423  Sum_probs=31.3

Q ss_pred             CCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh
Q 020768          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (321)
Q Consensus       179 ~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~  216 (321)
                      .....+|+|+|+|..|+.++..+...|. .|.+++.++
T Consensus        27 ~~~pkkV~IIGaG~aGLsaA~~L~~~G~-~V~vlE~~~   63 (370)
T d2iida1          27 TSNPKHVVIVGAGMAGLSAAYVLAGAGH-QVTVLEASE   63 (370)
T ss_dssp             CSSCCEEEEECCBHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            3456799999999999999999999998 688887654

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.00  E-value=2.4  Score=33.57  Aligned_cols=114  Identities=18%  Similarity=0.181  Sum_probs=60.9

Q ss_pred             CCCEEEEEcCChhHHHHHHHH-HHcCCCeEEEEeCCh-----------hHHH-HHHHcCCCeEEecCCCcccHHHHHHHH
Q 020768          181 PETNVLIMGAGPIGLVTMLGA-RAFGAPRIVIVDVDD-----------YRLS-VAKELGADNIVKVSTNLQDIAEEVEKI  247 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla-~~~g~~~vv~v~~~~-----------~~~~-~~~~~g~~~vi~~~~~~~~~~~~~~~~  247 (321)
                      .|.+|+|.|.|.+|..+++++ +..|+ ++++++.+.           +.+. +.++.+..  ..+.....-..+   ++
T Consensus        30 ~g~~vaIqG~GnVG~~~a~~L~~e~Ga-~vv~vsd~~G~i~~~~Gld~~~l~~~~~~~~~~--~~~~~~~~~~~~---~~  103 (234)
T d1b26a1          30 KKATVAVQGFGNVGQFAALLISQELGS-KVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTV--VTYPKGERITNE---EL  103 (234)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHHHCC-EEEEEEETTEEEECTTCCCHHHHHHHHHHSSCS--TTCSSCEEECHH---HH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHhcCC-ceEEeecCCCcEEeccccchHHHHHHHHhhcce--eccccceeeccc---cc
Confidence            588999999999999999887 57899 566654221           2222 22222211  011000000011   11


Q ss_pred             HHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchh-hhccceEEE
Q 020768          248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTP-AAARYLIYS  306 (321)
Q Consensus       248 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~k~~~i~  306 (321)
                         ....+|+.+=|.-....-....+.|+.  +++ ++..+.+.+.+-.. |..|+|.+.
T Consensus       104 ---~~~~~DI~~PcA~~~~I~~~~a~~l~~--~~I-~e~AN~p~t~~a~~~L~~rgI~~~  157 (234)
T d1b26a1         104 ---LELDVDILVPAALEGAIHAGNAERIKA--KAV-VEGANGPTTPEADEILSRRGILVV  157 (234)
T ss_dssp             ---HTSCCSEEEECSCTTCBCHHHHTTCCC--SEE-ECCSSSCBCHHHHHHHHHTTCEEE
T ss_pred             ---cccccceeecchhcccccHHHHHHhhh--ceE-eecCCCCCCHHHHHHHHHCCeEEe
Confidence               145789999887765444455555654  343 44444443333222 667777654

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=89.90  E-value=0.28  Score=34.48  Aligned_cols=35  Identities=20%  Similarity=0.442  Sum_probs=29.6

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~  216 (321)
                      ..++++|+|+|.+|.-+++.+..+|. .|..+.+.+
T Consensus        21 ~p~~v~IiGgG~ig~E~A~~l~~~G~-~Vtlve~~~   55 (117)
T d1ebda2          21 VPKSLVVIGGGYIGIELGTAYANFGT-KVTILEGAG   55 (117)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             cCCeEEEECCCccceeeeeeeccccc-EEEEEEecc
Confidence            45899999999999999999999999 566666554

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=89.89  E-value=2.5  Score=31.99  Aligned_cols=108  Identities=17%  Similarity=0.213  Sum_probs=68.8

Q ss_pred             HHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCC
Q 020768          175 RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT  253 (321)
Q Consensus       175 ~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~  253 (321)
                      +...+++|..+ |-+. |+=|+.. .+++. +. +|+++|.+++..+.++++-...+..++....++.+.+..   ..-.
T Consensus        12 ~~l~~~~g~~~-vD~T~G~GGhs~-~iL~~-~~-~viaiD~D~~ai~~a~~~~~~~~~~~~~~f~~~~~~l~~---~~~~   84 (182)
T d1wg8a2          12 DLLAVRPGGVY-VDATLGGAGHAR-GILER-GG-RVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRHLAA---LGVE   84 (182)
T ss_dssp             HHHTCCTTCEE-EETTCTTSHHHH-HHHHT-TC-EEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHHHHH---TTCS
T ss_pred             HhcCCCCCCEE-EEeCCCCcHHHH-HHhcc-cC-cEEEEhhhhhHHHHHhhccccceeEeehHHHHHHHHHHH---cCCC
Confidence            44567888864 5444 5556644 44444 44 799999999999998876544443344444454444333   2345


Q ss_pred             CccEEEEcCCCHH---------------HHHHHHHHcccCCEEEEEcCCCC
Q 020768          254 GIDVSFDCAGFNK---------------TMSTALSATRAGGKVCLVGMGHL  289 (321)
Q Consensus       254 ~~d~vid~~g~~~---------------~~~~~~~~l~~~G~~v~~g~~~~  289 (321)
                      .+|.|+=-.|-+.               .+....+.++++|+++.+.....
T Consensus        85 ~vdgIl~DLGvSs~qld~~~re~~~~~~~L~~~~~~lk~gg~~~ii~fhs~  135 (182)
T d1wg8a2          85 RVDGILADLGVSSFHLDDPSDELNALKEFLEQAAEVLAPGGRLVVIAFHSL  135 (182)
T ss_dssp             CEEEEEEECSCCHHHHHCGGTHHHHHHHHHHHHHHHEEEEEEEEEEECSHH
T ss_pred             ccCEEEEEccCCHHHhhcchHHHHHHHHHHHHHHhhhCCCCeEEEEecccc
Confidence            6887764444322               36788899999999999886543

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=89.78  E-value=0.67  Score=34.82  Aligned_cols=83  Identities=16%  Similarity=0.119  Sum_probs=54.4

Q ss_pred             EEEEEcCChhHHHHHHHHHHc-CCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcC
Q 020768          184 NVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~-g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  262 (321)
                      +|.|+|+|.+|...+..++.. +++.+.++++++++.      ....+..+.+    .    ..    ....+|+|+.|+
T Consensus         5 rvgiiG~G~ig~~~~~~l~~~~~~elvav~~~~~~~~------~~~~~~~~~~----~----~~----~~~~~D~Vvi~t   66 (170)
T d1f06a1           5 RVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATLD------TKTPVFDVAD----V----DK----HADDVDVLFLCM   66 (170)
T ss_dssp             EEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCCS------SSSCEEEGGG----G----GG----TTTTCSEEEECS
T ss_pred             eEEEECChHHHHHHHHHHHhCCCcEEEEEEecccccc------cccccccchh----h----hh----hccccceEEEeC
Confidence            689999999998888777764 554444455554332      1122222111    1    01    124689999999


Q ss_pred             CCHHHHHHHHHHcccCCEEEEE
Q 020768          263 GFNKTMSTALSATRAGGKVCLV  284 (321)
Q Consensus       263 g~~~~~~~~~~~l~~~G~~v~~  284 (321)
                      +...+++.+..+|..|-.+++.
T Consensus        67 p~~~h~~~a~~aL~aG~~vv~~   88 (170)
T d1f06a1          67 GSATDIPEQAPKFAQFACTVDT   88 (170)
T ss_dssp             CTTTHHHHHHHHHTTTSEEECC
T ss_pred             CCcccHHHHHHHHHCCCcEEEe
Confidence            9888899999999998887654

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=89.66  E-value=0.75  Score=38.86  Aligned_cols=32  Identities=19%  Similarity=0.045  Sum_probs=26.8

Q ss_pred             CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCC
Q 020768          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD  215 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~  215 (321)
                      +.|||+|+ |-+|...+..+...|. .|+++++.
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~-~V~~~~r~   34 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRR   34 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC-
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-EEEEEECC
Confidence            57899998 9999998888888898 68888764

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=89.64  E-value=0.17  Score=40.28  Aligned_cols=35  Identities=26%  Similarity=0.461  Sum_probs=30.1

Q ss_pred             CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhH
Q 020768          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYR  218 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~  218 (321)
                      +++||+|+ +++|...++.+...|+ .|+.+++++++
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~   37 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGY-RVVVLDLRREG   37 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCccc
Confidence            57899998 9999999999999999 68888877654

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=89.56  E-value=2.7  Score=30.37  Aligned_cols=96  Identities=20%  Similarity=0.262  Sum_probs=61.6

Q ss_pred             CEEEEEc-CChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 020768          183 TNVLIMG-AGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (321)
Q Consensus       183 ~~vlI~G-ag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  261 (321)
                      ++|.|+| .|.+|...+..++..|+ .|.+.+.+.+........+++.++... ......+.+.++...... =.+++|+
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~v~~~~-~~~~~~~v~~~~~~~~~~-~~iiiD~   86 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGY-PISILDREDWAVAESILANADVVIVSV-PINLTLETIERLKPYLTE-NMLLADL   86 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTTCGGGHHHHHTTCSEEEECS-CGGGHHHHHHHHGGGCCT-TSEEEEC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCC-CcEecccccccccchhhhhcccccccc-chhhheeeeecccccccC-CceEEEe
Confidence            5899999 59999999999999999 588888887766666556777666533 233444444444332222 2488898


Q ss_pred             CCCHH-HHHHHHHHcccCCEEEE
Q 020768          262 AGFNK-TMSTALSATRAGGKVCL  283 (321)
Q Consensus       262 ~g~~~-~~~~~~~~l~~~G~~v~  283 (321)
                      .+... ..+...+.+.  .+++.
T Consensus        87 ~Svk~~~~~~~~~~~~--~~~v~  107 (152)
T d2pv7a2          87 TSVKREPLAKMLEVHT--GAVLG  107 (152)
T ss_dssp             CSCCHHHHHHHHHHCS--SEEEE
T ss_pred             cccCHHHHHHHHHHcc--CCEEE
Confidence            77643 3344444433  35543

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=89.50  E-value=0.33  Score=34.45  Aligned_cols=38  Identities=32%  Similarity=0.586  Sum_probs=31.9

Q ss_pred             CCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChh
Q 020768          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDY  217 (321)
Q Consensus       179 ~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~  217 (321)
                      ++++++++|+|+|.+|.-++..++.+|. .|..++.+++
T Consensus        27 ~~~~~~vvIIGgG~iG~E~A~~l~~~g~-~Vtli~~~~~   64 (121)
T d1d7ya2          27 LRPQSRLLIVGGGVIGLELAATARTAGV-HVSLVETQPR   64 (121)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             hhcCCeEEEECcchhHHHHHHHhhcccc-eEEEEeeccc
Confidence            4677999999999999999999999998 5777766553

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=89.50  E-value=0.51  Score=33.80  Aligned_cols=88  Identities=26%  Similarity=0.297  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCChh--------HHHHHHH---HHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHH
Q 020768          181 PETNVLIMGAGPI--------GLVTMLG---ARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       181 ~g~~vlI~Gag~v--------G~~a~ql---a~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      .-++|||+|+|+.        -+++.|.   +|..|+ .++.+.++++...--.++ +|.++. .   +=..+.+.++.+
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~-~~iliN~NP~TVstd~d~-aD~lYf-e---Plt~e~v~~Ii~   79 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGY-RVINVNSNPATIMTDPEM-ADATYI-E---PIHWEVVRKIIE   79 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTC-EEEEECSCTTCGGGCGGG-SSEEEC-S---CCCHHHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCC-eEEEecCchHhhhcChhh-cceeee-e---cCCHHHHHHHHH
Confidence            4578999998754        2444444   455699 688888888764321111 344432 1   111333444433


Q ss_pred             HhCCCccEEEEcCCCHHHHHHHHHHcc
Q 020768          250 AMGTGIDVSFDCAGFNKTMSTALSATR  276 (321)
Q Consensus       250 ~~~~~~d~vid~~g~~~~~~~~~~~l~  276 (321)
                        ....|.++-..|++..++.+.++.+
T Consensus        80 --~E~pd~il~~~GGQtalnla~~L~~  104 (127)
T d1a9xa3          80 --KERPDAVLPTMGGQTALNCALELER  104 (127)
T ss_dssp             --HHCCSEEECSSSHHHHHHHHHHHHH
T ss_pred             --HhCcCCeEEEeeeehHhHHHHHHHH
Confidence              2468999999998776666666544

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=89.24  E-value=0.28  Score=38.88  Aligned_cols=34  Identities=26%  Similarity=0.410  Sum_probs=29.5

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeC
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV  214 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~  214 (321)
                      +.-.+|+|+|+|..|+.++..+...|. .|.++++
T Consensus         4 ~~~~kVvVIGaGiaGl~~A~~L~~~G~-~V~vier   37 (268)
T d1c0pa1           4 HSQKRVVVLGSGVIGLSSALILARKGY-SVHILAR   37 (268)
T ss_dssp             CCSCEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred             CCCCcEEEECccHHHHHHHHHHHHCCC-CEEEEeC
Confidence            455689999999999999999999999 5777775

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=89.22  E-value=0.36  Score=36.44  Aligned_cols=38  Identities=21%  Similarity=0.351  Sum_probs=31.4

Q ss_pred             EEEEE-cCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH
Q 020768          184 NVLIM-GAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA  222 (321)
Q Consensus       184 ~vlI~-Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~  222 (321)
                      +|.|+ |+|++|...++.+...|+ .|++.++++++.+.+
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~-~V~l~~R~~e~~~~l   40 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGH-EIVVGSRREEKAEAK   40 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHH
Confidence            57888 559999999999999999 577778888876544

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=88.74  E-value=4.6  Score=34.34  Aligned_cols=56  Identities=20%  Similarity=0.225  Sum_probs=42.9

Q ss_pred             cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeC--ChhHHHHHHHcCCCeEEe
Q 020768          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV--DDYRLSVAKELGADNIVK  232 (321)
Q Consensus       177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~--~~~~~~~~~~~g~~~vi~  232 (321)
                      .+++++++|+-..+|..|.+.+..|+.+|.+.++++..  +++|.+.++.+|++.+..
T Consensus       139 ~~~~~g~~VVeaSSGN~GiAlA~~aa~lGik~~Iv~P~~~~~~K~~~ira~GAeVi~~  196 (382)
T d1wkva1         139 RRVEKGSLVADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVD  196 (382)
T ss_dssp             TTSCTTCEEEEECCHHHHHHHHHHHHHTTCEEEEEEETTSCHHHHHHHHHTTCEEEEE
T ss_pred             hccCCCCEEEEeCCcHHHHHHHHHHHHcCCCEEEEeeccccccccccccccCcceeec
Confidence            35677776544456999999999999999976666653  467888889999876543

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=88.72  E-value=0.59  Score=35.30  Aligned_cols=100  Identities=19%  Similarity=0.244  Sum_probs=62.6

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEE-eC--ChhHHHHHHHcCCCe------E------EecCC------CcccHHH
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIV-DV--DDYRLSVAKELGADN------I------VKVST------NLQDIAE  242 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v-~~--~~~~~~~~~~~g~~~------v------i~~~~------~~~~~~~  242 (321)
                      +|.|.|-|-+|.++...+...+.. ++++ +.  +.+...++-++--.+      +      +..+.      ...+..+
T Consensus         2 kIgINGfGRIGR~~~R~~~~~~~~-ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~~   80 (169)
T d1dssg1           2 KIGINGFGRIGRLVLRAALEMGAQ-VVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPEN   80 (169)
T ss_dssp             CEEEECCSHHHHHHHHHHHHHTCC-EEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred             eEEEECCcHHHHHHHHHHHhCCCc-EEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCChHH
Confidence            578889999999999998888885 5555 42  235555554433111      1      00000      0011111


Q ss_pred             HHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC
Q 020768          243 EVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL  289 (321)
Q Consensus       243 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  289 (321)
                       + .|.   ..++|+||||+|--...+.+...+..+.+-+++..+..
T Consensus        81 -i-~W~---~~gvD~ViEcTG~f~~~~~~~~hl~~gakkViisaP~~  122 (169)
T d1dssg1          81 -I-PWS---KAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPSA  122 (169)
T ss_dssp             -C-CHH---HHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCCS
T ss_pred             -C-Ccc---ccCCCEEEecCceEcCHHHHHHHHhcCCceEeecCCcc
Confidence             0 121   24799999999987777888889998887788876543

>d1o58a_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thermotoga maritima [TaxId: 2336]

Probab=88.65  E-value=4.5  Score=32.84  Aligned_cols=100  Identities=21%  Similarity=0.181  Sum_probs=62.3

Q ss_pred             EEE-cCChhHHHHHHHHHHcCCCeEEEEeC--ChhHHHHHHHcCCCeEEecCCCc-------------------------
Q 020768          186 LIM-GAGPIGLVTMLGARAFGAPRIVIVDV--DDYRLSVAKELGADNIVKVSTNL-------------------------  237 (321)
Q Consensus       186 lI~-Gag~vG~~a~qla~~~g~~~vv~v~~--~~~~~~~~~~~g~~~vi~~~~~~-------------------------  237 (321)
                      +|. .+|..|.++...++.+|.+.++.+..  ++.|.+.++.+|++.+....+..                         
T Consensus        58 vv~~SsGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  137 (293)
T d1o58a_          58 IVEPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLKMLGAELVLTPGELGMKGAVEKALEISRETGAHMLNQFEN  137 (293)
T ss_dssp             EEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHHCCBCCCTTTC
T ss_pred             eEEecCcchhhHHHHhhhhccceeEeeccccccHHHeeccccCCcEEEEecCcchhhHHHHHHHHHHhccCCEEeeeccc
Confidence            444 56999999999999999987777754  46788889999987543211100                         


Q ss_pred             -ccHHH----HHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHc---cc-CCEEEEEc
Q 020768          238 -QDIAE----EVEKIQKAMGTGIDVSFDCAGFNKTMSTALSAT---RA-GGKVCLVG  285 (321)
Q Consensus       238 -~~~~~----~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l---~~-~G~~v~~g  285 (321)
                       .++..    ...++.+..+..+|.++-++|+..++.-+...+   .+ +-+++.+-
T Consensus       138 ~~~~~~~~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~~~~~~ii~ve  194 (293)
T d1o58a_         138 PYNVYSHQFTTGPEILKQMDYQIDAFVAGVGTGGTISGVGRVLKGFFGNGVKIVAVE  194 (293)
T ss_dssp             HHHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHHGGGSEEEEEE
T ss_pred             cceeeeccccHHHhhhhhcCCCCCEEEEecCcchhHHHHHHHHHHHCCCCCeEEEEe
Confidence             00100    012222233456899999888876665554433   33 34776665

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=88.63  E-value=0.99  Score=37.76  Aligned_cols=36  Identities=19%  Similarity=0.172  Sum_probs=29.0

Q ss_pred             CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChh
Q 020768          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY  217 (321)
Q Consensus       181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~  217 (321)
                      .-++|+|+|+ |.+|...+..+...|.+ |+++.++.+
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~-V~~l~R~~~   38 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHH-VRAQVHSLK   38 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCC-EEEEESCSC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCe-EEEEECCcc
Confidence            3478999999 99999999999999995 666656543

>d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase TrmB {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=88.50  E-value=1.3  Score=34.39  Aligned_cols=95  Identities=18%  Similarity=0.128  Sum_probs=62.7

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      .||=+|+|. |..++.+|+...-..+++++-+......+    ++.+...+.....+..++.+.   +   ....+|.++
T Consensus        34 lvLdIGcG~-G~~~~~lA~~~p~~~~iGid~~~~~v~~a~~~~~~~~l~Ni~~~~~da~~l~~~---~---~~~~~~~i~  106 (204)
T d1yzha1          34 IHVEVGSGK-GAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDY---F---EDGEIDRLY  106 (204)
T ss_dssp             EEEEESCTT-SHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGT---S---CTTCCSEEE
T ss_pred             eEEEEeccC-CHHHHHHHHHCCCCceEEEeccHHHHHHHHHhhhhhccccceeeecCHHHHhhh---c---cCCceehhc
Confidence            444457754 88889999988656899999998765543    456776543332322222211   1   134578887


Q ss_pred             EcCCC--------------HHHHHHHHHHcccCCEEEEEc
Q 020768          260 DCAGF--------------NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       260 d~~g~--------------~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      -....              +..++.+.+.|++||.+.+..
T Consensus       107 i~fPdPw~K~~h~krRl~~~~~l~~~~~~LkpgG~l~i~T  146 (204)
T d1yzha1         107 LNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT  146 (204)
T ss_dssp             EESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred             ccccccccchhhhhhhhhHHHHHHHHHHhCCCCcEEEEEE
Confidence            66553              367889999999999997753

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=88.45  E-value=3.3  Score=29.93  Aligned_cols=37  Identities=30%  Similarity=0.517  Sum_probs=29.8

Q ss_pred             CEEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhHH
Q 020768          183 TNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRL  219 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~~  219 (321)
                      .+|.|+|+|.+|..++..+...+. ..++.++.++++.
T Consensus         2 ~Ki~IIGaG~VG~~~a~~l~~~~l~~ElvL~D~~~~~~   39 (143)
T d1llda1           2 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERV   39 (143)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccccc
Confidence            478899999999999888887766 4588888887654

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=88.42  E-value=0.98  Score=32.15  Aligned_cols=61  Identities=20%  Similarity=0.265  Sum_probs=49.6

Q ss_pred             HHHHHcCCCCCCEEEEE-cCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEe
Q 020768          172 HACRRANIGPETNVLIM-GAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVK  232 (321)
Q Consensus       172 ~~l~~~~~~~g~~vlI~-Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~  232 (321)
                      ..++.++++.-+.+++. ..-..-+++.++++.+|..++++...+++..+.++++|++.+++
T Consensus        56 ~~l~~~~i~~a~~vv~~t~~d~~N~~~~~~~k~~~~~~iI~~~~~~~~~~~l~~~G~d~vi~  117 (132)
T d1lssa_          56 KTLEDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFERLGVDVVVS  117 (132)
T ss_dssp             HHHHHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTHHHHHHHTTCSEEEC
T ss_pred             hhhhhcChhhhhhhcccCCcHHHHHHHHHHHHHcCCceEEEEecCHHHHHHHHHCCCCEEEC
Confidence            34677888777777665 33566788899999999988998888888899999999999886

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=88.39  E-value=0.42  Score=33.75  Aligned_cols=35  Identities=26%  Similarity=0.334  Sum_probs=29.0

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~  216 (321)
                      ..++++|+|+|.+|+-.++.+..+|.+ |..+..++
T Consensus        21 ~p~~i~IiG~G~ig~E~A~~l~~~G~~-Vtiv~~~~   55 (119)
T d3lada2          21 VPGKLGVIGAGVIGLELGSVWARLGAE-VTVLEAMD   55 (119)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTCE-EEEEESSS
T ss_pred             CCCeEEEECCChHHHHHHHHHHHcCCc-eEEEEeec
Confidence            458999999999999999999999994 65555443

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=88.37  E-value=0.86  Score=36.66  Aligned_cols=102  Identities=15%  Similarity=-0.001  Sum_probs=65.8

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHc-CCCeEEecC-CCcccHHHHHHHHHHHh
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL-GADNIVKVS-TNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~-g~~~vi~~~-~~~~~~~~~~~~~~~~~  251 (321)
                      ++......+.+||=+|+|. |..+.+++..... .|.+++.+++-.+.+++. .....+.+. .+..++       . ..
T Consensus        86 l~~l~~~~~~~vLD~GcG~-G~~t~~ll~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~d~~~~-------~-~~  155 (254)
T d1xtpa_          86 IASLPGHGTSRALDCGAGI-GRITKNLLTKLYA-TTDLLEPVKHMLEEAKRELAGMPVGKFILASMETA-------T-LP  155 (254)
T ss_dssp             HHTSTTCCCSEEEEETCTT-THHHHHTHHHHCS-EEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGC-------C-CC
T ss_pred             HhhCCCCCCCeEEEecccC-ChhhHHHHhhcCc-eEEEEcCCHHHHHhhhccccccccceeEEcccccc-------c-cC
Confidence            3455556777888888754 7777787776554 799999999999988763 222222221 111111       0 11


Q ss_pred             CCCccEEEEcCC-----CH---HHHHHHHHHcccCCEEEEEc
Q 020768          252 GTGIDVSFDCAG-----FN---KTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       252 ~~~~d~vid~~g-----~~---~~~~~~~~~l~~~G~~v~~g  285 (321)
                      ...+|+|+..-.     .+   ..+..+.+.|+++|.+++.-
T Consensus       156 ~~~fD~I~~~~vl~hl~d~d~~~~l~~~~~~LkpgG~iii~e  197 (254)
T d1xtpa_         156 PNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKE  197 (254)
T ss_dssp             SSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCccceEEeeccccccchhhhHHHHHHHHHhcCCCcEEEEEe
Confidence            356899987432     11   34788899999999998754

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.26  E-value=0.23  Score=40.59  Aligned_cols=32  Identities=34%  Similarity=0.445  Sum_probs=28.5

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~  216 (321)
                      .|+|+|+|+.|+.++..++..|. .|.+++.++
T Consensus         4 ~V~IvGaGp~Gl~~A~~L~~~G~-~v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIGAGPSGLLLGQLLHKAGI-DNVILERQT   35 (292)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTC-CEEEECSSC
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            58999999999999999999999 588887765

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=88.14  E-value=0.38  Score=37.97  Aligned_cols=96  Identities=18%  Similarity=0.104  Sum_probs=59.2

Q ss_pred             cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      ....++.+||=+|+|. |..+..+++ .|. .|++++.+++..+.+++...+.+-.......++         .....+|
T Consensus        16 ~~~~~~~~VLDiGcG~-G~~~~~l~~-~g~-~v~giD~s~~~i~~a~~~~~~~~~~~~~~~~~~---------~~~~~fD   83 (225)
T d2p7ia1          16 TPFFRPGNLLELGSFK-GDFTSRLQE-HFN-DITCVEASEEAISHAQGRLKDGITYIHSRFEDA---------QLPRRYD   83 (225)
T ss_dssp             GGGCCSSCEEEESCTT-SHHHHHHTT-TCS-CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC---------CCSSCEE
T ss_pred             hhhCCCCcEEEEeCCC-cHHHHHHHH-cCC-eEEEEeCcHHHhhhhhccccccccccccccccc---------ccccccc
Confidence            3445677899888854 666655554 466 699999999999999865433322111111111         1145799


Q ss_pred             EEEEcC-----CCH-HHHHHHH-HHcccCCEEEEE
Q 020768          257 VSFDCA-----GFN-KTMSTAL-SATRAGGKVCLV  284 (321)
Q Consensus       257 ~vid~~-----g~~-~~~~~~~-~~l~~~G~~v~~  284 (321)
                      +|+-.-     .++ ..+..+. ++|+++|.++..
T Consensus        84 ~I~~~~vleh~~d~~~~l~~i~~~~Lk~gG~l~i~  118 (225)
T d2p7ia1          84 NIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLV  118 (225)
T ss_dssp             EEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEE
T ss_pred             cccccceeEecCCHHHHHHHHHHHhcCCCceEEEE
Confidence            998521     222 2345565 679999998864

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=88.02  E-value=0.17  Score=41.78  Aligned_cols=98  Identities=16%  Similarity=0.236  Sum_probs=64.7

Q ss_pred             cCCCCCCEEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHHHc----CCCeEEecCCCcccHHHHHHHHHHHh
Q 020768          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKEL----GADNIVKVSTNLQDIAEEVEKIQKAM  251 (321)
Q Consensus       177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~~~----g~~~vi~~~~~~~~~~~~~~~~~~~~  251 (321)
                      .++.++.+||=+|+|. |..+..+++..+. ..++++|.+++..+.+++.    +....+.. .+..+       +  ..
T Consensus        23 ~~~~~~~~ILDiGcG~-G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~-~d~~~-------~--~~   91 (281)
T d2gh1a1          23 WKITKPVHIVDYGCGY-GYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLE-GDATE-------I--EL   91 (281)
T ss_dssp             SCCCSCCEEEEETCTT-THHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEE-SCTTT-------C--CC
T ss_pred             hccCCcCEEEEecCcC-CHHHHHHHHhCCCCCEEEEEecchhHhhhhhcccccccccccccc-ccccc-------c--cc
Confidence            3567788998889864 8888888887542 3799999999888877643    33211111 11111       1  01


Q ss_pred             CCCccEEEEcC-----CC-HHHHHHHHHHcccCCEEEEEc
Q 020768          252 GTGIDVSFDCA-----GF-NKTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       252 ~~~~d~vid~~-----g~-~~~~~~~~~~l~~~G~~v~~g  285 (321)
                      ...+|+|+...     .+ ...++.+.+.|++||.+++.-
T Consensus        92 ~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~lii~~  131 (281)
T d2gh1a1          92 NDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFE  131 (281)
T ss_dssp             SSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             cCCceEEEEehhhhcCCCHHHHHHHHHHHcCcCcEEEEEE
Confidence            34699998643     22 246788999999999998764

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=87.98  E-value=0.49  Score=40.19  Aligned_cols=31  Identities=26%  Similarity=0.310  Sum_probs=26.7

Q ss_pred             EEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeC
Q 020768          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV  214 (321)
Q Consensus       184 ~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~  214 (321)
                      +|||+|+ |-+|...+..+...|..++++++.
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~   33 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDK   33 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeC
Confidence            6999998 999999999888889877777764

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=87.93  E-value=0.44  Score=36.73  Aligned_cols=87  Identities=11%  Similarity=0.250  Sum_probs=53.8

Q ss_pred             CEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeE----EecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI----VKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~v----i~~~~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      .+|.|+|+|..|.+.+..+...|. .|....++++..+.+.+-+....    +....+- .+...+.+.    -.+.|++
T Consensus         8 ~KI~ViGaG~wGtAlA~~La~~g~-~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i-~~t~~l~~a----~~~ad~i   81 (189)
T d1n1ea2           8 NKAVVFGSGAFGTALAMVLSKKCR-EVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNI-TFTSDVEKA----YNGAEII   81 (189)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTTEE-EEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTE-EEESCHHHH----HTTCSCE
T ss_pred             ceEEEECCCHHHHHHHHHHHHcCC-eEEEEEecHHHHHHHhhccccccccccccccccc-ccchhhhhc----cCCCCEE
Confidence            479999999999999988887777 67788888888777664331100    0111110 001112221    1457999


Q ss_pred             EEcCCCHHHHHHHHHHcc
Q 020768          259 FDCAGFNKTMSTALSATR  276 (321)
Q Consensus       259 id~~g~~~~~~~~~~~l~  276 (321)
                      |-++.. ..+...++.++
T Consensus        82 iiavPs-~~~~~~~~~~~   98 (189)
T d1n1ea2          82 LFVIPT-QFLRGFFEKSG   98 (189)
T ss_dssp             EECSCH-HHHHHHHHHHC
T ss_pred             EEcCcH-HHHHHHHHHHH
Confidence            999996 46666665543

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=87.86  E-value=0.46  Score=34.27  Aligned_cols=38  Identities=18%  Similarity=0.367  Sum_probs=31.9

Q ss_pred             CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh
Q 020768          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (321)
Q Consensus       178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~  216 (321)
                      .++++++++|+|+|.+|+-++..++.+|. .|..++..+
T Consensus        31 ~~~~~k~v~VIGgG~iG~E~A~~l~~~g~-~Vtvie~~~   68 (133)
T d1q1ra2          31 QLIADNRLVVIGGGYIGLEVAATAIKANM-HVTLLDTAA   68 (133)
T ss_dssp             TCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             hhccCCEEEEECCchHHHHHHHHHHhhCc-ceeeeeecc
Confidence            34678999999999999999999999999 577776554

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.77  E-value=1  Score=37.52  Aligned_cols=30  Identities=37%  Similarity=0.481  Sum_probs=26.1

Q ss_pred             CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEe
Q 020768          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVD  213 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~  213 (321)
                      ++|||+|+ |-+|...+..+...|. .|++++
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~-~V~~ld   33 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGY-LPVVID   33 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTC-CEEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcC-EEEEEE
Confidence            68999999 9999999999989998 577764

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=87.74  E-value=1.1  Score=35.78  Aligned_cols=101  Identities=18%  Similarity=0.175  Sum_probs=61.4

Q ss_pred             HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCeEEecCCCcccHHHHHHHHHHH
Q 020768          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNIVKVSTNLQDIAEEVEKIQKA  250 (321)
Q Consensus       175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~vi~~~~~~~~~~~~~~~~~~~  250 (321)
                      +...+....+||=+|+| .|..+..+++......+++++.. +..+.+    .+.+....+....  .|+.+       .
T Consensus        74 ~~~d~~~~~~VLDvGcG-~G~~~~~la~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~rv~~~~--~D~~~-------~  142 (253)
T d1tw3a2          74 AAYDWTNVRHVLDVGGG-KGGFAAAIARRAPHVSATVLEMA-GTVDTARSYLKDEGLSDRVDVVE--GDFFE-------P  142 (253)
T ss_dssp             HHSCCTTCSEEEEETCT-TSHHHHHHHHHCTTCEEEEEECT-THHHHHHHHHHHTTCTTTEEEEE--CCTTS-------C
T ss_pred             hhcCCccCCEEEEeCCC-CCHHHHHHHHhcceeEEEEccCH-HHHHHHHHHHHHhhcccchhhcc--ccchh-------h
Confidence            44567778899888875 47788889988754478888763 333333    3444332121111  11110       1


Q ss_pred             hCCCccEEEEcC-----CCH---HHHHHHHHHcccCCEEEEEcC
Q 020768          251 MGTGIDVSFDCA-----GFN---KTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       251 ~~~~~d~vid~~-----g~~---~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      ...++|+|+-..     ..+   ..++.+.+.|+|||++++.-.
T Consensus       143 ~~~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPGG~l~i~e~  186 (253)
T d1tw3a2         143 LPRKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHER  186 (253)
T ss_dssp             CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             cccchhheeeccccccCCchhhHHHHHHHHHhcCCCcEEEEEec
Confidence            135689988532     111   357889999999999998764

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.70  E-value=0.33  Score=39.87  Aligned_cols=36  Identities=25%  Similarity=0.534  Sum_probs=30.1

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~  216 (321)
                      ++-.+|+|+|+|..|+.|+..+...|. .|.+.+.++
T Consensus         3 ~~~~kViVIGaG~aGL~aA~~L~~~G~-~V~VlEa~~   38 (449)
T d2dw4a2           3 KKTGKVIIIGSGVSGLAAARQLQSFGM-DVTLLEARD   38 (449)
T ss_dssp             SCCCEEEEECCBHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCCCcEEEECCCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence            345679999999999999999999999 688876543

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=87.70  E-value=0.46  Score=33.30  Aligned_cols=34  Identities=26%  Similarity=0.350  Sum_probs=29.3

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~  216 (321)
                      .++++|+|+|.+|+-+++.++.+|. .|..+.+.+
T Consensus        21 p~~vvIiGgG~ig~E~A~~l~~~G~-~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVGAGYIGVELGGVINGLGA-KTHLFEMFD   54 (116)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCEEEEECCChhhHHHHHHhhcccc-EEEEEeecc
Confidence            5789999999999999999999999 577776654

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=87.64  E-value=0.28  Score=38.30  Aligned_cols=85  Identities=20%  Similarity=0.200  Sum_probs=55.2

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      .|.+|.|+|.|.+|...+++++.+|+ +|++.+....+.       ....+.+    .++.    ++..    ..|++.-
T Consensus        44 ~~ktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~-------~~~~~~~----~~l~----~l~~----~~D~v~~  103 (199)
T d1dxya1          44 GQQTVGVMGTGHIGQVAIKLFKGFGA-KVIAYDPYPMKG-------DHPDFDY----VSLE----DLFK----QSDVIDL  103 (199)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSS-------CCTTCEE----CCHH----HHHH----HCSEEEE
T ss_pred             cceeeeeeecccccccccccccccce-eeeccCCccchh-------hhcchhH----HHHH----HHHH----hccccee
Confidence            36799999999999999999999999 688887654321       0000111    1222    2211    2577777


Q ss_pred             cCCC-HHH----HHHHHHHcccCCEEEEEc
Q 020768          261 CAGF-NKT----MSTALSATRAGGKVCLVG  285 (321)
Q Consensus       261 ~~g~-~~~----~~~~~~~l~~~G~~v~~g  285 (321)
                      +... +++    =...++.++++..++.++
T Consensus       104 ~~plt~~T~~li~~~~l~~mk~~a~lIN~a  133 (199)
T d1dxya1         104 HVPGIEQNTHIINEAAFNLMKPGAIVINTA  133 (199)
T ss_dssp             CCCCCGGGTTSBCHHHHHHSCTTEEEEECS
T ss_pred             eecccccccccccHHHhhccCCceEEEecc
Confidence            6543 221    235678888888888887

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=87.63  E-value=0.61  Score=33.00  Aligned_cols=84  Identities=17%  Similarity=0.217  Sum_probs=46.9

Q ss_pred             CCCEEEEEcCChh--------HHH---HHHHHHHcCCCeEEEEeCChhHHHHHHHcC-CCeEEecCCCcccHHHHHHHHH
Q 020768          181 PETNVLIMGAGPI--------GLV---TMLGARAFGAPRIVIVDVDDYRLSVAKELG-ADNIVKVSTNLQDIAEEVEKIQ  248 (321)
Q Consensus       181 ~g~~vlI~Gag~v--------G~~---a~qla~~~g~~~vv~v~~~~~~~~~~~~~g-~~~vi~~~~~~~~~~~~~~~~~  248 (321)
                      ..++|||+|+|+.        -++   ++..+|..|. .+|.+.++++....  .+. +|.+.. ..   =..+.+.++.
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~-~~IliN~NPeTVst--d~d~aD~lYf-ep---lt~e~v~~Ii   75 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGY-ETIMVNCNPETVST--DYDTSDRLYF-EP---VTLEDVLEIV   75 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTC-EEEEECCCTTSSTT--STTSSSEEEC-CC---CSHHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCC-eEEEEecChhhhhc--ChhhcCceEE-cc---CCHHHHHHHH
Confidence            3578999998754        244   4445555798 68888888876432  112 343332 11   1122333332


Q ss_pred             HHhCCCccEEEEcCCCHHHHHHHHH
Q 020768          249 KAMGTGIDVSFDCAGFNKTMSTALS  273 (321)
Q Consensus       249 ~~~~~~~d~vid~~g~~~~~~~~~~  273 (321)
                      +  ..+.|.|+-..|++..+..+.+
T Consensus        76 ~--~E~p~~ii~~~GGQtalnla~~   98 (121)
T d1a9xa4          76 R--IEKPKGVIVQYGGQTPLKLARA   98 (121)
T ss_dssp             H--HHCCSEEECSSSTHHHHTTHHH
T ss_pred             H--HhCCCEEEeehhhhhHHHHHHH
Confidence            2  2457888888888655444443

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=87.53  E-value=0.4  Score=35.68  Aligned_cols=36  Identities=11%  Similarity=0.281  Sum_probs=28.9

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCC-eEEEEeCCh
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAP-RIVIVDVDD  216 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~-~vv~v~~~~  216 (321)
                      .|++|+|+|+|.+|+.+++.++.++.+ .|.+++.++
T Consensus         1 ~gkrivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            478999999999999999999988753 466666544

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=87.48  E-value=1.4  Score=36.74  Aligned_cols=107  Identities=15%  Similarity=0.162  Sum_probs=70.4

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHH-HcCCCeEEEEeCChhHHHHH----HHcCCCeEEecCCCcccHHHHHHHHH
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGAR-AFGAPRIVIVDVDDYRLSVA----KELGADNIVKVSTNLQDIAEEVEKIQ  248 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~-~~g~~~vv~v~~~~~~~~~~----~~~g~~~vi~~~~~~~~~~~~~~~~~  248 (321)
                      .+....+...++.|+|+|..+...+..+. .+..+.|.+.+++.++.+..    +..+.....+       ..+.   . 
T Consensus       117 ~~~la~~~~~~l~iiGaG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~-------~~~a---~-  185 (320)
T d1omoa_         117 AKYLARKNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQ-------PAEE---A-  185 (320)
T ss_dssp             HHHHSCTTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEEC-------CHHH---H-
T ss_pred             HHHhccCCccEEEEecCcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccc-------hhhh---h-
Confidence            34444456678999999999877777666 46788899999988775533    3344433221       1111   1 


Q ss_pred             HHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-Cccccch
Q 020768          249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLT  296 (321)
Q Consensus       249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~  296 (321)
                          .+.|+|+-|+.+...+ --.+.+++|-++..+|...+ ..++|..
T Consensus       186 ----~~aDiV~taT~s~~P~-~~~~~l~~G~hv~~iGs~~p~~~Eld~~  229 (320)
T d1omoa_         186 ----SRCDVLVTTTPSRKPV-VKAEWVEEGTHINAIGADGPGKQELDVE  229 (320)
T ss_dssp             ----TSSSEEEECCCCSSCC-BCGGGCCTTCEEEECSCCSTTCCCBCHH
T ss_pred             ----ccccEEEEeccCcccc-cchhhcCCCCeEeecCCccccccccCHH
Confidence                4689999988874322 11256999999999997654 3466655

>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=87.47  E-value=2.6  Score=34.33  Aligned_cols=114  Identities=18%  Similarity=0.182  Sum_probs=67.8

Q ss_pred             HcCCCCCCEEEEEc-C-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCeEEecCCCcccHHHHHHHHHH
Q 020768          176 RANIGPETNVLIMG-A-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       176 ~~~~~~g~~vlI~G-a-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      ....++|++||=.- | |+--...++   .+.-..+++.+.+..|.+.+    +++|...++...... ....    .  
T Consensus        97 ~L~~~~g~~vLD~CAaPGgKt~~la~---l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~~-~~~~----~--  166 (284)
T d1sqga2          97 WLAPQNGEHILDLCAAPGGKTTHILE---VAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGR-YPSQ----W--  166 (284)
T ss_dssp             HHCCCTTCEEEEESCTTCHHHHHHHH---HCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTT-CTHH----H--
T ss_pred             ccCccccceeEeccCccccchhhhhh---hhhhhhhhhhhcchhhhhhHhhhhhcccccceeeecccc-ccch----h--
Confidence            35778999998773 3 555443333   33334799999999887654    568876544332221 1111    1  


Q ss_pred             HhCCCccEEEE---cCCCH-------------------------HHHHHHHHHcccCCEEEEEc--CCCCCccccchhhh
Q 020768          250 AMGTGIDVSFD---CAGFN-------------------------KTMSTALSATRAGGKVCLVG--MGHLEMTVPLTPAA  299 (321)
Q Consensus       250 ~~~~~~d~vid---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g--~~~~~~~~~~~~~~  299 (321)
                      .....||.|+-   |+|..                         ..+..+++.|++||+++..-  ....+.+--+..+.
T Consensus       167 ~~~~~fd~IL~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~gG~lvYsTCS~~~~ENE~vv~~~l  246 (284)
T d1sqga2         167 CGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFL  246 (284)
T ss_dssp             HTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGGGTHHHHHHHH
T ss_pred             cccccccEEEEeccccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCCceEEEeeecCchhhCHHHHHHHH
Confidence            12456887765   66654                         24778888999999876554  33333343344444

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=87.42  E-value=0.47  Score=38.23  Aligned_cols=31  Identities=26%  Similarity=0.426  Sum_probs=27.1

Q ss_pred             EEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCC
Q 020768          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD  215 (321)
Q Consensus       184 ~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~  215 (321)
                      +|||+|+ |-+|...+..++..|. .|++++++
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~-~Vi~~~r~   34 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNV-EVIPTDVQ   34 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSE-EEEEECTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEeech
Confidence            6999999 9999999999999998 68888764

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.36  E-value=0.51  Score=38.99  Aligned_cols=44  Identities=20%  Similarity=0.103  Sum_probs=32.6

Q ss_pred             CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCCh--hHHHHHHHcCC
Q 020768          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD--YRLSVAKELGA  227 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~--~~~~~~~~~g~  227 (321)
                      .+|||+|+ |-+|...+..+...|. .|+++++..  ...+.++.++.
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~l~~~~~   47 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGI   47 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcccHHHHHHhcc
Confidence            47999999 9999999998888899 678877643  23344555554

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=87.17  E-value=0.35  Score=40.48  Aligned_cols=35  Identities=31%  Similarity=0.393  Sum_probs=30.2

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChh
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDY  217 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~  217 (321)
                      ..+|+|+|||..|+.++..+...|. .|.+++.++.
T Consensus         2 ~KKI~IIGaG~sGL~aA~~L~k~G~-~V~viEk~~~   36 (314)
T d2bi7a1           2 SKKILIVGAGFSGAVIGRQLAEKGH-QVHIIDQRDH   36 (314)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSSS
T ss_pred             CCEEEEECCcHHHHHHHHHHHhCCC-CEEEEECCCC
Confidence            4689999999999999999998898 6888877653

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=87.14  E-value=0.62  Score=37.43  Aligned_cols=33  Identities=27%  Similarity=0.378  Sum_probs=29.1

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeC
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV  214 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~  214 (321)
                      .|.+|+|.|.|.+|..+++++...|+ +|++++.
T Consensus        30 ~g~~v~IqGfGnVG~~~a~~L~~~Ga-kvv~vsD   62 (242)
T d1v9la1          30 EGKTVAIQGMGNVGRWTAYWLEKMGA-KVIAVSD   62 (242)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEEEC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCC-eEEEeec
Confidence            68899999999999999999999999 5666553

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.08  E-value=0.52  Score=33.40  Aligned_cols=35  Identities=23%  Similarity=0.388  Sum_probs=29.3

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~  216 (321)
                      ..++++|+|+|.+|+-+++++..+|. .|..+..++
T Consensus        22 ~p~~~vIiG~G~ig~E~A~~l~~lG~-~Vtii~~~~   56 (122)
T d1v59a2          22 IPKRLTIIGGGIIGLEMGSVYSRLGS-KVTVVEFQP   56 (122)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCCeEEEECCCchHHHHHHHHHhhCc-ceeEEEecc
Confidence            35799999999999999999999999 566665544

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.01  E-value=0.54  Score=36.46  Aligned_cols=41  Identities=24%  Similarity=0.339  Sum_probs=35.6

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHc
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL  225 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~  225 (321)
                      +|.|+|+|-+|+..+..+...|. .|++.|.++++.+.+++-
T Consensus         2 kI~ViGlG~vGl~~a~~la~~g~-~V~g~D~n~~~i~~ln~g   42 (202)
T d1mv8a2           2 RISIFGLGYVGAVCAGCLSARGH-EVIGVDVSSTKIDLINQG   42 (202)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTT
T ss_pred             EEEEECCCHhHHHHHHHHHhCCC-cEEEEeCCHHHHHHhccc
Confidence            58899999999988888888898 799999999998887753

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=87.00  E-value=0.73  Score=36.15  Aligned_cols=101  Identities=15%  Similarity=0.161  Sum_probs=60.5

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHH----HHcCCCeEEecCCCcccHHHHHHHHHHHh-CC
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVA----KELGADNIVKVSTNLQDIAEEVEKIQKAM-GT  253 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~----~~~g~~~vi~~~~~~~~~~~~~~~~~~~~-~~  253 (321)
                      ...++||=+|.+ .|..++.+|+++. ..++++++.+++..+.+    ++.|...-+....  .+..+.+.++.+.. ..
T Consensus        55 ~kpk~ILEiGt~-~G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~--Gd~~e~l~~l~~~~~~~  131 (214)
T d2cl5a1          55 YSPSLVLELGAY-CGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILN--GASQDLIPQLKKKYDVD  131 (214)
T ss_dssp             HCCSEEEEECCT-TSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEE--SCHHHHGGGHHHHSCCC
T ss_pred             hCCCEEEEEccC-chhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeee--ccccccccchhhccccc
Confidence            445788888863 3667777888753 23899999998877765    4556543222222  34444455544332 34


Q ss_pred             CccEEEEcCCCHH-----HHHHHHHHcccCCEEEE
Q 020768          254 GIDVSFDCAGFNK-----TMSTALSATRAGGKVCL  283 (321)
Q Consensus       254 ~~d~vid~~g~~~-----~~~~~~~~l~~~G~~v~  283 (321)
                      .+|+++--.....     .+...++.|++||.++.
T Consensus       132 ~~D~ifiD~~~~~~~~~~~l~~~~~lLkpGGvIv~  166 (214)
T d2cl5a1         132 TLDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLLA  166 (214)
T ss_dssp             CEEEEEECSCGGGHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             ccceeeecccccccccHHHHHHHhCccCCCcEEEE
Confidence            6898875433222     13445567999997654

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=86.98  E-value=0.43  Score=39.21  Aligned_cols=36  Identities=19%  Similarity=0.152  Sum_probs=29.7

Q ss_pred             CCCEEEEEcC-C--hhHHHHHHHHHHcCCCeEEEEeCChh
Q 020768          181 PETNVLIMGA-G--PIGLVTMLGARAFGAPRIVIVDVDDY  217 (321)
Q Consensus       181 ~g~~vlI~Ga-g--~vG~~a~qla~~~g~~~vv~v~~~~~  217 (321)
                      .|+++||+|+ |  ++|...++.+...|+ .|+.+.++++
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga-~Vvi~~~~~~   45 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGA-EILVGTWVPA   45 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEEEHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCchh
Confidence            5789999998 5  899999999999999 5776666543

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=86.95  E-value=0.59  Score=34.67  Aligned_cols=41  Identities=20%  Similarity=0.154  Sum_probs=33.3

Q ss_pred             CCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHH
Q 020768          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRL  219 (321)
Q Consensus       179 ~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~  219 (321)
                      +++-.+|.|+|+|.+|..+++++...+...++.++.++++.
T Consensus         4 ~~k~~KI~IIGaG~VG~~lA~~l~~~~~~el~L~D~~~~~~   44 (154)
T d1pzga1           4 VQRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMP   44 (154)
T ss_dssp             CSCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHH
T ss_pred             ccCCCcEEEECCCHHHHHHHHHHHhCCCceEEEEEeccccc
Confidence            35567899999999999888888888877788888776543

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=86.91  E-value=1.5  Score=36.89  Aligned_cols=114  Identities=17%  Similarity=0.195  Sum_probs=71.7

Q ss_pred             HHHHcCCCCCCEEEEEcCChhHHHHHHHH-HHcCCCeEEEEeCChhHHH-HHHHcCCC---eEEecCCCcccHHHHHHHH
Q 020768          173 ACRRANIGPETNVLIMGAGPIGLVTMLGA-RAFGAPRIVIVDVDDYRLS-VAKELGAD---NIVKVSTNLQDIAEEVEKI  247 (321)
Q Consensus       173 ~l~~~~~~~g~~vlI~Gag~vG~~a~qla-~~~g~~~vv~v~~~~~~~~-~~~~~g~~---~vi~~~~~~~~~~~~~~~~  247 (321)
                      +.+...-+..+++.|+|+|..+...++.. ..++.+.|.+.++++++.+ +++++...   .+...    .+..+.+   
T Consensus       119 aa~~LA~~da~~l~iiG~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~----~s~~eav---  191 (340)
T d1x7da_         119 AAQALARPNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRA----SSVAEAV---  191 (340)
T ss_dssp             HHHHHSCTTCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEEC----SSHHHHH---
T ss_pred             HHHHhhccCCceEEEEcccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceec----CCHHHHH---
Confidence            33554445668899999999988777744 4678989999999977654 55555321   22221    1222222   


Q ss_pred             HHHhCCCccEEEEcCCCHHHHH-HHHHHcccCCEEEEEcCCCC-Cccccchhh
Q 020768          248 QKAMGTGIDVSFDCAGFNKTMS-TALSATRAGGKVCLVGMGHL-EMTVPLTPA  298 (321)
Q Consensus       248 ~~~~~~~~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~  298 (321)
                           .+.|+++-|+.+...-. --.+.++++-++..+|...+ ..+++..-+
T Consensus       192 -----~~ADIi~t~Tas~s~~Pv~~~~~l~pG~hI~aiGs~~p~~~Eld~~~l  239 (340)
T d1x7da_         192 -----KGVDIITTVTADKAYATIITPDMLEPGMHLNAVGGDCPGKTELHADVL  239 (340)
T ss_dssp             -----TTCSEEEECCCCSSEEEEECGGGCCTTCEEEECSCCBTTBEEECHHHH
T ss_pred             -----hcCCceeeccccCCCCcccchhhcCCCCEEeecccchhhhhccCHHHH
Confidence                 46899998776431100 11367899999999996644 457776533

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=86.52  E-value=0.44  Score=36.48  Aligned_cols=83  Identities=17%  Similarity=0.143  Sum_probs=56.7

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      .|.+|.|+|.|.+|...+++++.+|+ +|++.+++...       +....  .    .++.    ++.    ...|+|+-
T Consensus        41 ~gk~vgIiG~G~IG~~va~~l~~~g~-~v~~~d~~~~~-------~~~~~--~----~~l~----ell----~~sDiv~~   98 (181)
T d1qp8a1          41 QGEKVAVLGLGEIGTRVGKILAALGA-QVRGFSRTPKE-------GPWRF--T----NSLE----EAL----REARAAVC   98 (181)
T ss_dssp             TTCEEEEESCSTHHHHHHHHHHHTTC-EEEEECSSCCC-------SSSCC--B----SCSH----HHH----TTCSEEEE
T ss_pred             cCceEEEeccccccccceeeeecccc-ccccccccccc-------cceee--e----echh----hhh----hccchhhc
Confidence            47799999999999999999999999 78888765432       11110  0    1122    221    35788888


Q ss_pred             cCCCH-HHH----HHHHHHcccCCEEEEEc
Q 020768          261 CAGFN-KTM----STALSATRAGGKVCLVG  285 (321)
Q Consensus       261 ~~g~~-~~~----~~~~~~l~~~G~~v~~g  285 (321)
                      +..-. ++.    ...++.++++..++.+|
T Consensus        99 ~~pl~~~t~~li~~~~l~~mk~~ailIN~~  128 (181)
T d1qp8a1          99 ALPLNKHTRGLVKYQHLALMAEDAVFVNVG  128 (181)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTTCEEEECS
T ss_pred             ccccccccccccccceeeeccccceEEecc
Confidence            66432 221    46778889999888887

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=86.50  E-value=0.52  Score=33.63  Aligned_cols=36  Identities=31%  Similarity=0.455  Sum_probs=29.9

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~  216 (321)
                      +..++++|+|+|.+|+-.++..+.+|. .|..+...+
T Consensus        24 ~~p~~vvIiGgG~IG~E~A~~~~~~G~-~Vtive~~~   59 (125)
T d1ojta2          24 EVPGKLLIIGGGIIGLEMGTVYSTLGS-RLDVVEMMD   59 (125)
T ss_dssp             CCCSEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             ccCCeEEEECCCHHHHHHHHHhhcCCC-EEEEEEeec
Confidence            446899999999999999999999999 566665543

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=86.22  E-value=0.33  Score=38.95  Aligned_cols=33  Identities=24%  Similarity=0.440  Sum_probs=28.4

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChh
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDY  217 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~  217 (321)
                      .|+|+|+|+.|++++..+...|. .|.+++.+++
T Consensus         6 DViIIGaG~aGl~aA~~la~~G~-~V~vlEk~~~   38 (253)
T d2gqfa1           6 ENIIIGAGAAGLFCAAQLAKLGK-SVTVFDNGKK   38 (253)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred             cEEEECcCHHHHHHHHHHHHCCC-cEEEEecCCC
Confidence            48899999999999999999998 5888887654

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=86.04  E-value=0.57  Score=32.70  Aligned_cols=34  Identities=26%  Similarity=0.581  Sum_probs=28.9

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~  216 (321)
                      +++++|+|+|.+|.-+++.++.+|. .|..+.+.+
T Consensus        21 p~~vvIiGgG~~G~E~A~~l~~~g~-~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGGGYIGLELGIAYRKLGA-QVSVVEARE   54 (115)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             CCeEEEECCCHHHHHHHHHHhhccc-ceEEEeeec
Confidence            4899999999999999999999998 566665544

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=85.92  E-value=0.62  Score=34.51  Aligned_cols=36  Identities=25%  Similarity=0.332  Sum_probs=30.3

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~  215 (321)
                      ..+++|+|+|+|.+|.-++..+..+|++.|..+.+.
T Consensus        43 ~~~~kVvVIGGGdtA~D~A~~a~r~GA~~V~vi~rr   78 (153)
T d1gtea3          43 SIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRK   78 (153)
T ss_dssp             CCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred             cCCCEEEEECCChhHHHHHHHHHHcCCcceeEEEeC
Confidence            346789999999999999999999999877776544

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=85.81  E-value=0.36  Score=38.36  Aligned_cols=32  Identities=34%  Similarity=0.802  Sum_probs=27.0

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~  216 (321)
                      -|+|+|+|..|+.++..+...|. .|++++.++
T Consensus         4 DViIIGaG~aGl~aA~~la~~G~-~V~liEk~~   35 (251)
T d2i0za1           4 DVIVIGGGPSGLMAAIGAAEEGA-NVLLLDKGN   35 (251)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            37899999999999988888999 578887654

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=85.61  E-value=4.1  Score=28.47  Aligned_cols=94  Identities=14%  Similarity=0.128  Sum_probs=60.9

Q ss_pred             CEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcC
Q 020768          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  262 (321)
                      ++++|.|.|.+|...++.++  +. .+++++.++++.+.++..|...+ .-+..  + .+.+++   .+-..++.++-+.
T Consensus         1 kHivI~G~g~~g~~l~~~L~--~~-~i~vi~~d~~~~~~~~~~~~~~i-~Gd~~--~-~~~L~~---a~i~~A~~vi~~~   70 (129)
T d2fy8a1           1 RHVVICGWSESTLECLRELR--GS-EVFVLAEDENVRKKVLRSGANFV-HGDPT--R-VSDLEK---ANVRGARAVIVNL   70 (129)
T ss_dssp             CCEEEESCCHHHHHHHHTSC--GG-GEEEEESCTTHHHHHHHTTCEEE-ESCTT--S-HHHHHH---TTCTTCSEEEECC
T ss_pred             CEEEEECCCHHHHHHHHHHc--CC-CCEEEEcchHHHHHHHhcCcccc-ccccC--C-HHHHHH---hhhhcCcEEEEec
Confidence            36889999999998887765  33 46778889999888888886543 32221  1 233333   2345689999888


Q ss_pred             CCHHH---HHHHHHHcccCCEEEEEcC
Q 020768          263 GFNKT---MSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       263 g~~~~---~~~~~~~l~~~G~~v~~g~  286 (321)
                      .++..   .-...+.+.+..+++....
T Consensus        71 ~~d~~n~~~~~~~r~~~~~~~iia~~~   97 (129)
T d2fy8a1          71 ESDSETIHCILGIRKIDESVRIIAEAE   97 (129)
T ss_dssp             SSHHHHHHHHHHHHHHCSSSCEEEECS
T ss_pred             cchhhhHHHHHHHHHHCCCceEEEEEc
Confidence            87542   2233455677766666553

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=85.53  E-value=0.4  Score=37.32  Aligned_cols=32  Identities=19%  Similarity=0.332  Sum_probs=28.0

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~  216 (321)
                      -|+|+|+|..|+.++..+...|. +|.+++.++
T Consensus         7 DviViGaG~~Gl~~A~~La~~G~-~V~vlE~~~   38 (297)
T d2bcgg1           7 DVIVLGTGITECILSGLLSVDGK-KVLHIDKQD   38 (297)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-CEEEEcCCC
Confidence            48899999999999999999998 588888764

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.49  E-value=0.25  Score=41.15  Aligned_cols=31  Identities=26%  Similarity=0.320  Sum_probs=26.5

Q ss_pred             CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeC
Q 020768          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV  214 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~  214 (321)
                      ++|||+|+ |-+|...+..+...|. .|+++++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~-~V~~~d~   33 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGH-EVTVVDN   33 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeC
Confidence            57999999 9999999988888898 5777764

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=85.39  E-value=0.75  Score=33.80  Aligned_cols=91  Identities=21%  Similarity=0.232  Sum_probs=47.5

Q ss_pred             EEEEEcC-ChhHHHHHHH-HHHc--CCCeEEEEeCChhHHHHHHHcCCC-eEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768          184 NVLIMGA-GPIGLVTMLG-ARAF--GAPRIVIVDVDDYRLSVAKELGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       184 ~vlI~Ga-g~vG~~a~ql-a~~~--g~~~vv~v~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      +|.|+|| |.+|+-.+++ +.+.  -...+....++..........+-. .+...    .+.    ..+     .++|++
T Consensus         3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~----~~~----~~~-----~~~Div   69 (146)
T d1t4ba1           3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDA----FDL----EAL-----KALDII   69 (146)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEET----TCH----HHH-----HTCSEE
T ss_pred             EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeecc----cch----hhh-----hcCcEE
Confidence            7899999 9999999974 4432  333455454443221111111111 11111    111    111     368999


Q ss_pred             EEcCCCHHHHHHHHHHcccC--CEEEEEcCC
Q 020768          259 FDCAGFNKTMSTALSATRAG--GKVCLVGMG  287 (321)
Q Consensus       259 id~~g~~~~~~~~~~~l~~~--G~~v~~g~~  287 (321)
                      |-|++.+......-.....+  ..++..+..
T Consensus        70 F~a~~~~~s~~~~~~~~~~g~~~~VID~Ss~  100 (146)
T d1t4ba1          70 VTCQGGDYTNEIYPKLRESGWQGYWIDAASS  100 (146)
T ss_dssp             EECSCHHHHHHHHHHHHHTTCCCEEEECSST
T ss_pred             EEecCchHHHHhhHHHHhcCCCeecccCCcc
Confidence            99999755444444444544  246666643

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=85.35  E-value=1.8  Score=35.69  Aligned_cols=99  Identities=20%  Similarity=0.270  Sum_probs=62.9

Q ss_pred             EEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCC--hhHHHHHHHcCCCeEEecCCCcccHHHHHHHHH-------------
Q 020768          185 VLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD--DYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQ-------------  248 (321)
Q Consensus       185 vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~--~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~-------------  248 (321)
                      .+|... |..|.+++..|+.+|.+.++++..+  +++.+.++.+|++.+.. .....+.....+++.             
T Consensus        71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~~-~~~~~~~~~~a~~~a~~~g~~~~~~~~~  149 (318)
T d1v71a1          71 GVLTFSSGNHAQAIALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVIMY-DRYKDDREKMAKEISEREGLTIIPPYDH  149 (318)
T ss_dssp             CEEECCSSHHHHHHHHHHHHTTCCEEEEEETTCCHHHHHHHHHTTCEEEEE-CTTTTCHHHHHHHHHHHHTCBCCCSSSS
T ss_pred             eeeeeccchhhHHHHHhhcccccceeecccccccHHHHHHHHHcCCcEEec-cCCchHHHHHHHHHHHhcCCEecCCccc
Confidence            345544 9999999999999999877777544  57788889999876543 222222222222221             


Q ss_pred             ---------------HHhCCCccEEEEcCCCHHHHH---HHHHHcccCCEEEEEc
Q 020768          249 ---------------KAMGTGIDVSFDCAGFNKTMS---TALSATRAGGKVCLVG  285 (321)
Q Consensus       249 ---------------~~~~~~~d~vid~~g~~~~~~---~~~~~l~~~G~~v~~g  285 (321)
                                     ++. ..+|.+|-++|+..++.   ..++...++.+++-+.
T Consensus       150 ~~~~~g~~t~~~Ei~~q~-~~~d~vvv~~G~GG~~~Gi~~~~~~~~~~~~ii~v~  203 (318)
T d1v71a1         150 PHVLAGQGTAAKELFEEV-GPLDALFVCLGGGGLLSGSALAARHFAPNCEVYGVE  203 (318)
T ss_dssp             HHHHHHHTHHHHHHHHHH-CCCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             cccccccchHHHHHHHhc-CCCCEEEEcCCchHHHHHHHHHHHhhCCCceeeccc
Confidence                           111 34788888888765544   3445567777777664

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=85.35  E-value=0.7  Score=34.86  Aligned_cols=99  Identities=17%  Similarity=0.195  Sum_probs=59.5

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC--hhHHHHHHHcCCCe-----EEecCC-------------CcccHHHH
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD--DYRLSVAKELGADN-----IVKVST-------------NLQDIAEE  243 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~--~~~~~~~~~~g~~~-----vi~~~~-------------~~~~~~~~  243 (321)
                      +|.|.|-|-+|.++.+.+...+.. ++++...  .+...++-++.-.+     -+..++             ...+..+ 
T Consensus         2 kigINGfGRIGR~~~R~l~~~~i~-iv~INd~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~~-   79 (168)
T d2g82a1           2 KVGINGFGRIGRQVFRILHSRGVE-VALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKE-   79 (168)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTCC-EEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGG-
T ss_pred             EEEEECCcHHHHHHHHHHhcCCCE-EEEECCCcchhhhhheeecccccCccccccccccceeEecceeEEEEecCChHH-
Confidence            578999999999999988888885 5554322  23444443332110     000000             0011110 


Q ss_pred             HHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCC
Q 020768          244 VEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH  288 (321)
Q Consensus       244 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  288 (321)
                      + .|.   ..++|+|+||+|.-...+.+...+..+.+=+.++.+.
T Consensus        80 i-~W~---~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~  120 (168)
T d2g82a1          80 I-PWA---EAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPA  120 (168)
T ss_dssp             C-CTG---GGTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred             C-ccc---ccCCceeEeccccccchHHhhhhhccccceeeecccc
Confidence            0 111   2479999999998767778888888887667776554

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=85.32  E-value=0.61  Score=33.03  Aligned_cols=33  Identities=18%  Similarity=0.082  Sum_probs=27.7

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeC
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV  214 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~  214 (321)
                      ..++++|+|+|.+|+-.++.++.+|.++.+ +.+
T Consensus        19 ~P~~vvIIGgG~iG~E~A~~l~~lG~~Vti-i~~   51 (122)
T d1h6va2          19 CPGKTLVVGASYVALECAGFLAGIGLDVTV-MVR   51 (122)
T ss_dssp             CCCSEEEECCSHHHHHHHHHHHHTTCCEEE-EES
T ss_pred             CCCeEEEECCCccHHHHHHHHhhcCCeEEE-EEe
Confidence            457899999999999999999999996444 444

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.28  E-value=0.72  Score=32.71  Aligned_cols=34  Identities=24%  Similarity=0.269  Sum_probs=28.9

Q ss_pred             CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh
Q 020768          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (321)
Q Consensus       182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~  216 (321)
                      .++++|+|+|.+|+-+++.++.+|. .|..+.+++
T Consensus        22 pk~vvIvGgG~iG~E~A~~l~~~G~-~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGAGYIAVEMAGILSALGS-KTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCEEEEEcCCccHHHHHHHHhcCCc-EEEEEeecc
Confidence            4799999999999999999999999 566666544

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=85.09  E-value=0.47  Score=33.66  Aligned_cols=36  Identities=22%  Similarity=0.357  Sum_probs=30.5

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~  216 (321)
                      +..++++|+|+|.+|+-+++++..+|. .|-++.+++
T Consensus        23 ~~p~~~viiG~G~iglE~A~~~~~~G~-~Vtvi~~~~   58 (123)
T d1dxla2          23 EIPKKLVVIGAGYIGLEMGSVWGRIGS-EVTVVEFAS   58 (123)
T ss_dssp             SCCSEEEESCCSHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             ccCCeEEEEccchHHHHHHHHHHhcCC-eEEEEEEcc
Confidence            346899999999999999999999998 577776654

>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Possible histamine N-methyltransferase TM1293
species: Thermotoga maritima [TaxId: 2336]

Probab=84.79  E-value=1.3  Score=33.98  Aligned_cols=90  Identities=13%  Similarity=0.187  Sum_probs=58.5

Q ss_pred             CCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       179 ~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      +.++.+||=+|+|. |..+..+      ..+++++.+++..+.+++.+...+.. +.  .++.        .....+|+|
T Consensus        34 ~~~~~~vLDiGcG~-G~~~~~~------~~~~giD~s~~~~~~a~~~~~~~~~~-d~--~~l~--------~~~~~fD~I   95 (208)
T d1vlma_          34 LLPEGRGVEIGVGT-GRFAVPL------KIKIGVEPSERMAEIARKRGVFVLKG-TA--ENLP--------LKDESFDFA   95 (208)
T ss_dssp             HCCSSCEEEETCTT-STTHHHH------TCCEEEESCHHHHHHHHHTTCEEEEC-BT--TBCC--------SCTTCEEEE
T ss_pred             hCCCCeEEEECCCC-ccccccc------ceEEEEeCChhhcccccccccccccc-cc--cccc--------ccccccccc
Confidence            45677899899853 4444333      14689999999999999876543221 11  1110        113568999


Q ss_pred             EEcC-----CC-HHHHHHHHHHcccCCEEEEEcC
Q 020768          259 FDCA-----GF-NKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       259 id~~-----g~-~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      +..-     .+ ...++.+.+.|++||.+++...
T Consensus        96 ~~~~~l~h~~d~~~~l~~~~~~L~pgG~l~i~~~  129 (208)
T d1vlma_          96 LMVTTICFVDDPERALKEAYRILKKGGYLIVGIV  129 (208)
T ss_dssp             EEESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ccccccccccccccchhhhhhcCCCCceEEEEec
Confidence            8732     22 2367899999999999887753

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=84.75  E-value=0.42  Score=37.16  Aligned_cols=31  Identities=29%  Similarity=0.592  Sum_probs=26.5

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~  215 (321)
                      -|+|+|+|+.|+.++..+..+|. +|++++..
T Consensus         5 DvvVIGgGpaGl~aA~~aa~~G~-kV~vie~~   35 (221)
T d1dxla1           5 DVVIIGGGPGGYVAAIKAAQLGF-KTTCIEKR   35 (221)
T ss_dssp             CEEEECCSHHHHHHHHHHHHHTC-CEEEEECS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-cEEEEEec
Confidence            47899999999999999999999 47777654

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=84.60  E-value=0.45  Score=35.76  Aligned_cols=30  Identities=27%  Similarity=0.453  Sum_probs=25.8

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeC
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDV  214 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~  214 (321)
                      -|+|+|+|+.|+.|+..|...|.+ +.+++.
T Consensus         3 DViIIGgGpaGl~AAi~aar~G~~-v~iie~   32 (184)
T d1fl2a1           3 DVLIVGSGPAGAAAAIYSARKGIR-TGLMGE   32 (184)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTTCC-EEEECS
T ss_pred             cEEEECcCHHHHHHHHHHHHcCCe-EEEEEE
Confidence            478999999999999999999995 666764

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=84.55  E-value=3.5  Score=34.08  Aligned_cols=114  Identities=11%  Similarity=0.154  Sum_probs=69.8

Q ss_pred             HHHHHHHc-CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeC--ChhHHHHHHHcCCCeEEecCCCcccHH-----
Q 020768          170 GLHACRRA-NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV--DDYRLSVAKELGADNIVKVSTNLQDIA-----  241 (321)
Q Consensus       170 a~~~l~~~-~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~--~~~~~~~~~~~g~~~vi~~~~~~~~~~-----  241 (321)
                      +++.+..+ .-.+..+|+...+|..|.+++..++..|.+.++++..  +.+|...++.+|++.+.. ........     
T Consensus        62 a~~~i~~~~~~~~~~~vv~assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~~-~~~~~~~~~~~~~  140 (331)
T d1tdja1          62 AYAMMAGLTEEQKAHGVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLH-GANFDEAKAKAIE  140 (331)
T ss_dssp             HHHHHHTTTTSSCSSSCEEEECSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHHHHSCEEECC-CSSHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCeeeecccchhHHHHHHhhccccccceeeccccchhHHHHHHHhcCCEEEEc-Ccccccchhhhhh
Confidence            34444432 2234455666667999999999999999977666643  367888899999875532 11111110     


Q ss_pred             -----------------------HHHHHHHHHhCCCccEEEEcCCCHHHHHHHH---HHcccCCEEEEEc
Q 020768          242 -----------------------EEVEKIQKAMGTGIDVSFDCAGFNKTMSTAL---SATRAGGKVCLVG  285 (321)
Q Consensus       242 -----------------------~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~---~~l~~~G~~v~~g  285 (321)
                                             ....++.++ ...+|.+|-++|+..++.-+.   +.+.++-+++.+-
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q-~~~~D~vv~~~G~GG~~aG~~~~~~~~~~~~~ii~ve  209 (331)
T d1tdja1         141 LSQQQGFTWVPPFDHPMVIAGQGTLALELLQQ-DAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVE  209 (331)
T ss_dssp             HHHHHCCEECCSSCCHHHHHHHHHHHHHHHHH-CTTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             hhhcCCCccccccCChHHhhhhhhHHHHHHHh-cCCCCEEEEeCChhHHHHHHHHHHHHhCCCcEEEEec
Confidence                                   011222222 345899999999876655444   4455667877774

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=84.37  E-value=0.37  Score=38.79  Aligned_cols=31  Identities=29%  Similarity=0.478  Sum_probs=27.1

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~  215 (321)
                      +|+|+|+|..|+.++..+...|. .|.+++.+
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~-~V~vlE~~   32 (347)
T d2ivda1           2 NVAVVGGGISGLAVAHHLRSRGT-DAVLLESS   32 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHTTTC-CEEEECSS
T ss_pred             eEEEECCCHHHHHHHHHHHhCCC-CEEEEecC
Confidence            58999999999999999999999 57788764

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=84.10  E-value=6.5  Score=29.13  Aligned_cols=73  Identities=21%  Similarity=0.365  Sum_probs=42.2

Q ss_pred             CCCEEEEEcCChhHHHHH---HHHHH--cCCCeEEEEeCChhHHHH--------HHHcCCCeEEecCCCcccHHHHHHHH
Q 020768          181 PETNVLIMGAGPIGLVTM---LGARA--FGAPRIVIVDVDDYRLSV--------AKELGADNIVKVSTNLQDIAEEVEKI  247 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~---qla~~--~g~~~vv~v~~~~~~~~~--------~~~~g~~~vi~~~~~~~~~~~~~~~~  247 (321)
                      |.-+|.|+|+|.+|....   .+++.  +....++.+|.+++|.+.        ...++...-+...   .|..+.+   
T Consensus         1 p~mKI~iIGaGsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~---td~~eaL---   74 (171)
T d1obba1           1 PSVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT---MNLDDVI---   74 (171)
T ss_dssp             CCCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE---SCHHHHH---
T ss_pred             CCcEEEEECCCHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe---CChhhcc---
Confidence            456899999998885432   23332  223479999999887653        2234443322211   2222221   


Q ss_pred             HHHhCCCccEEEEcCCC
Q 020768          248 QKAMGTGIDVSFDCAGF  264 (321)
Q Consensus       248 ~~~~~~~~d~vid~~g~  264 (321)
                           .+.|+|+.+.+.
T Consensus        75 -----~dad~Vv~~~~~   86 (171)
T d1obba1          75 -----IDADFVINTAMV   86 (171)
T ss_dssp             -----TTCSEEEECCCT
T ss_pred             -----cCCCeEeeeccc
Confidence                 468899887654

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=83.85  E-value=3.4  Score=30.97  Aligned_cols=101  Identities=22%  Similarity=0.254  Sum_probs=58.6

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCC---eEEEEe--CChhHHHHHHHcCCCe-----EEec-------CC------CcccH
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAP---RIVIVD--VDDYRLSVAKELGADN-----IVKV-------ST------NLQDI  240 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~---~vv~v~--~~~~~~~~~~~~g~~~-----vi~~-------~~------~~~~~  240 (321)
                      +|.|.|-|-+|.+....+...+..   .++++.  .+.+...++-++.-.+     -+..       +.      ...++
T Consensus         3 kigINGfGRIGR~v~R~~~~~~~~~~~~vvaINd~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~p   82 (173)
T d1obfo1           3 RVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANRNP   82 (173)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSCG
T ss_pred             EEEEECCcHHHHHHHHHHHhCCCCCCeEEEEEcCCCChHHHHHhhcccccCCCcCceEEeccceEEECCEEEEEEecCCH
Confidence            578889999999998876543221   355554  2334444443332110     0000       00      00111


Q ss_pred             HHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC
Q 020768          241 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL  289 (321)
Q Consensus       241 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  289 (321)
                      .+ + .|   ...++|+||||+|.-...+.+...|..+.+-+++..+..
T Consensus        83 ~~-i-~W---~~~gvDiViEcTG~f~~~~~a~~hl~~GakkViiSAP~~  126 (173)
T d1obfo1          83 AQ-L-PW---GALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPGG  126 (173)
T ss_dssp             GG-S-CT---TTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCCC
T ss_pred             HH-C-cc---cccccceEEEecccccCHHHHHHHhccCCcceEEecCCC
Confidence            10 0 11   135799999999986667788888988888888876543

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=83.77  E-value=6.5  Score=28.88  Aligned_cols=40  Identities=20%  Similarity=0.448  Sum_probs=32.4

Q ss_pred             CCCCEEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhHH
Q 020768          180 GPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRL  219 (321)
Q Consensus       180 ~~g~~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~~  219 (321)
                      .+..+|.|+|+|.+|..++..+...|. ..++.+|.++++.
T Consensus        18 ~~~~KV~IIGaG~VG~~~A~~l~~~~l~~ElvLiD~~~~~a   58 (160)
T d1i0za1          18 VPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKL   58 (160)
T ss_dssp             CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHH
T ss_pred             CCCCeEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccchh
Confidence            455799999999999999999988876 4588888876553

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=83.62  E-value=0.99  Score=33.31  Aligned_cols=93  Identities=20%  Similarity=0.155  Sum_probs=56.3

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCC--eEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAP--RIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~--~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v  258 (321)
                      |-+|.|+|| |-+|.-.++++..+.+.  .+....++...-+... ............+            ......|++
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~~-~~~~~~~~~~~~~------------~~~~~~d~~   67 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLK-FKDQDITIEETTE------------TAFEGVDIA   67 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEEE-ETTEEEEEEECCT------------TTTTTCSEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEeccccccccccc-ccCCcccccccch------------hhhhhhhhh
Confidence            458999999 99999999999887542  2333333221111000 0111111111111            113568999


Q ss_pred             EEcCCCHHHHHHHHHHcccCCEEEEEcCC
Q 020768          259 FDCAGFNKTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       259 id~~g~~~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      +-+.+.........+....+-+++..+..
T Consensus        68 f~~~~~~~s~~~~~~~~~~~~~VIDlSsd   96 (154)
T d2gz1a1          68 LFSAGSSTSAKYAPYAVKAGVVVVDNTSY   96 (154)
T ss_dssp             EECSCHHHHHHHHHHHHHTTCEEEECSST
T ss_pred             hhccCccchhhHHhhhccccceehhcChh
Confidence            99999776777777788889999999854

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=83.53  E-value=0.87  Score=34.87  Aligned_cols=39  Identities=18%  Similarity=0.330  Sum_probs=32.7

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE  224 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~  224 (321)
                      +|.|+|.|-+|+..+..+ +.|. .|++.|.++++.+.+++
T Consensus         2 kI~ViGlG~vGl~~a~~~-a~g~-~V~g~Din~~~v~~l~~   40 (196)
T d1dlja2           2 KIAVAGSGYVGLSLGVLL-SLQN-EVTIVDILPSKVDKINN   40 (196)
T ss_dssp             EEEEECCSHHHHHHHHHH-TTTS-EEEEECSCHHHHHHHHT
T ss_pred             EEEEECCChhHHHHHHHH-HCCC-cEEEEECCHHHHHHHhh
Confidence            588999999999877655 5788 79999999999887764

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.37  E-value=0.66  Score=35.87  Aligned_cols=69  Identities=19%  Similarity=0.233  Sum_probs=40.8

Q ss_pred             CEEEEEcC-ChhHHHHHHHHHHcCCC-eEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768          183 TNVLIMGA-GPIGLVTMLGARAFGAP-RIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~~~g~~-~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid  260 (321)
                      ++|||+|+ |.+|...+..+...|.. .|++..+++..       ....+..   ...++.+.    .......+|.|+.
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~-------~~~~~~~---~~~d~~~~----~~~~~~~~d~vi~   68 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-------EHPRLDN---PVGPLAEL----LPQLDGSIDTAFC   68 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-------CCTTEEC---CBSCHHHH----GGGCCSCCSEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh-------hcccccc---cccchhhh----hhccccchheeee
Confidence            68999999 99999999988888863 34444333211       0111111   11233222    1223456899999


Q ss_pred             cCCCH
Q 020768          261 CAGFN  265 (321)
Q Consensus       261 ~~g~~  265 (321)
                      |+|..
T Consensus        69 ~~g~~   73 (212)
T d2a35a1          69 CLGTT   73 (212)
T ss_dssp             CCCCC
T ss_pred             eeeee
Confidence            98764

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=83.03  E-value=6.5  Score=29.07  Aligned_cols=73  Identities=16%  Similarity=0.187  Sum_probs=41.5

Q ss_pred             CCCEEEEEcCChhHHH--HHHHHHHc-C--CCeEEEEeCChhHHHH--------HHHcCCCeEEecCCCcccHHHHHHHH
Q 020768          181 PETNVLIMGAGPIGLV--TMLGARAF-G--APRIVIVDVDDYRLSV--------AKELGADNIVKVSTNLQDIAEEVEKI  247 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~--a~qla~~~-g--~~~vv~v~~~~~~~~~--------~~~~g~~~vi~~~~~~~~~~~~~~~~  247 (321)
                      +.-+|.|+|+|.+|..  ...+++.. .  ...++.+|.+++|.+.        ...++...-+...   .+..+.+   
T Consensus         2 k~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~eal---   75 (167)
T d1u8xx1           2 KSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT---TDPEEAF---   75 (167)
T ss_dssp             CCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE---SCHHHHH---
T ss_pred             CCceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec---CChhhcc---
Confidence            3457889999777533  33333322 2  2368889999888652        2233443222221   1222221   


Q ss_pred             HHHhCCCccEEEEcCCC
Q 020768          248 QKAMGTGIDVSFDCAGF  264 (321)
Q Consensus       248 ~~~~~~~~d~vid~~g~  264 (321)
                           .+.|+|+.++|-
T Consensus        76 -----~~AD~Vvitag~   87 (167)
T d1u8xx1          76 -----TDVDFVMAHIRV   87 (167)
T ss_dssp             -----SSCSEEEECCCT
T ss_pred             -----CCCCEEEECCCc
Confidence                 579999999985

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=83.00  E-value=2.1  Score=32.20  Aligned_cols=95  Identities=18%  Similarity=0.117  Sum_probs=49.3

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC--hhHHHHHHHcCCCeE--EecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD--DYRLSVAKELGADNI--VKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~--~~~~~~~~~~g~~~v--i~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      +|.|+|+|..|.+.+..+...|. .|....+.  ++..+...+..-...  .......-.....+.+.    -...|+++
T Consensus         2 kI~ViGaG~~GtalA~~la~~g~-~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~ad~Ii   76 (180)
T d1txga2           2 IVSILGAGAMGSALSVPLVDNGN-EVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKC----LENAEVVL   76 (180)
T ss_dssp             EEEEESCCHHHHHHHHHHHHHCC-EEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHH----HTTCSEEE
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-EEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHH----Hhccchhh
Confidence            68899999999988888888887 56665543  233333332211000  00000000001112221    24689999


Q ss_pred             EcCCCHHHHHHHHHHccc---CCEEEEE
Q 020768          260 DCAGFNKTMSTALSATRA---GGKVCLV  284 (321)
Q Consensus       260 d~~g~~~~~~~~~~~l~~---~G~~v~~  284 (321)
                      .++... .+...++-+.+   +..++.+
T Consensus        77 ~avps~-~~~~~~~~l~~~l~~~~ii~~  103 (180)
T d1txga2          77 LGVSTD-GVLPVMSRILPYLKDQYIVLI  103 (180)
T ss_dssp             ECSCGG-GHHHHHHHHTTTCCSCEEEEC
T ss_pred             cccchh-hhHHHHHhhccccccceeccc
Confidence            999974 44444443332   2455544

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=82.71  E-value=5.1  Score=30.43  Aligned_cols=112  Identities=17%  Similarity=0.129  Sum_probs=65.6

Q ss_pred             HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcC---CCeEEecCCCcccHHHHHHHHHHH
Q 020768          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG---ADNIVKVSTNLQDIAEEVEKIQKA  250 (321)
Q Consensus       174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g---~~~vi~~~~~~~~~~~~~~~~~~~  250 (321)
                      ++...+++|+.++=.++|.=|+.. .+++...-..++++|.+++..+.+++.-   -+.+..+.....++...+..   .
T Consensus        16 i~~l~~~~~~~~lD~t~G~Gghs~-~il~~~~~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~~~~---~   91 (192)
T d1m6ya2          16 IEFLKPEDEKIILDCTVGEGGHSR-AILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKT---L   91 (192)
T ss_dssp             HHHHCCCTTCEEEETTCTTSHHHH-HHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHH---T
T ss_pred             HHhhCCCCCCEEEEecCCCcHHHH-HHHhcCCCCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHHHHHH---c
Confidence            344567888865322334444443 4444443337999999999999887532   12232232333343333332   2


Q ss_pred             hCCCccEEEEcCCC-H--------------HHHHHHHHHcccCCEEEEEcCCCC
Q 020768          251 MGTGIDVSFDCAGF-N--------------KTMSTALSATRAGGKVCLVGMGHL  289 (321)
Q Consensus       251 ~~~~~d~vid~~g~-~--------------~~~~~~~~~l~~~G~~v~~g~~~~  289 (321)
                      ....+|.|+--.|- +              +.+..+.+.|+++|+++.+.+...
T Consensus        92 ~~~~vdgIl~DlGvSs~Qld~~~r~~~~~~~~L~~a~~~Lk~gG~l~ii~f~s~  145 (192)
T d1m6ya2          92 GIEKVDGILMDLGVSTYQLKGENRELENLKEFLKKAEDLLNPGGRIVVISFHSL  145 (192)
T ss_dssp             TCSCEEEEEEECSCCHHHHHTSHTHHHHHHHHHHHGGGGEEEEEEEEEEESSHH
T ss_pred             CCCCcceeeeccchhHhhhhhhhccchhHHHHHHHHHHhcCCCCeeeeeccccH
Confidence            34678877543342 1              356778899999999999886543

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=82.67  E-value=0.94  Score=33.78  Aligned_cols=31  Identities=32%  Similarity=0.468  Sum_probs=26.4

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEE
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVI  211 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~  211 (321)
                      .+++|+|+|+|.+|.-++..++.+|.+..+.
T Consensus         2 ~~~~VvIIGgG~~G~e~A~~l~~~g~~v~v~   32 (185)
T d1q1ra1           2 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIR   32 (185)
T ss_dssp             CSCEEEEECCSHHHHHHHHHHHHTTCCSEEE
T ss_pred             CCCCEEEECCcHHHHHHHHHHHHcCCceEEE
Confidence            5789999999999999999999999864333

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=82.66  E-value=0.62  Score=38.59  Aligned_cols=32  Identities=28%  Similarity=0.597  Sum_probs=27.8

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~  216 (321)
                      .|+|+|||..|++++..++..|. .+++.+.++
T Consensus         9 dV~IIGAG~sGl~~a~~L~~~G~-~v~i~Ek~~   40 (298)
T d1w4xa1           9 DVLVVGAGFSGLYALYRLRELGR-SVHVIETAG   40 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             CEEEECccHHHHHHHHHHHhCCC-CEEEEEcCC
Confidence            58999999999999999999999 477787654

>d1p5ja_ c.79.1.1 (A:) L-serine dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: L-serine dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.64  E-value=5  Score=32.81  Aligned_cols=50  Identities=22%  Similarity=0.359  Sum_probs=37.7

Q ss_pred             CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCC--hhHHHHHHHcCCCeEE
Q 020768          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD--DYRLSVAKELGADNIV  231 (321)
Q Consensus       182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~--~~~~~~~~~~g~~~vi  231 (321)
                      |..-+|... |..|.+.+..|+.+|.+.++++..+  ++|.+.++.+|+..+.
T Consensus        53 g~~~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~Ga~v~~  105 (319)
T d1p5ja_          53 GCAHFVCSSAGNAGMAAAYAARQLGVPATIVVPGTTPALTIERLKNEGATCKV  105 (319)
T ss_dssp             TCCEEEECCSSHHHHHHHHHHHHHTCCEEEEECTTCCHHHHHHHHHTTCEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHhhhccccceeccccccccccccccccceecccc
Confidence            334455654 9999999999999999877777544  5778888888886544

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=82.57  E-value=0.61  Score=36.15  Aligned_cols=31  Identities=16%  Similarity=0.484  Sum_probs=26.6

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~  215 (321)
                      -|+|+|+|+.|+.++..|..+|.+ |.+++..
T Consensus         4 DvvVIG~G~aG~~aA~~a~~~G~k-V~iiE~~   34 (217)
T d1gesa1           4 DYIAIGGGSGGIASINRAAMYGQK-CALIEAK   34 (217)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTTCC-EEEEESS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCE-EEEEecc
Confidence            378899999999999999999994 7777754

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=82.52  E-value=1.8  Score=32.32  Aligned_cols=101  Identities=25%  Similarity=0.212  Sum_probs=58.3

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh--hHHHHHHHcCC-----CeEEecCC-------------CcccHHHH
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD--YRLSVAKELGA-----DNIVKVST-------------NLQDIAEE  243 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~--~~~~~~~~~g~-----~~vi~~~~-------------~~~~~~~~  243 (321)
                      +|.|.|-|-+|.++.+.+....--.++++....  +...++-++--     +.-+..++             ...+..+ 
T Consensus         3 kigINGFGRIGR~v~R~~~~~~~i~ivaINd~~~~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~p~~-   81 (166)
T d1gado1           3 KVGINGFGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPAN-   81 (166)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGGG-
T ss_pred             EEEEECCcHHHHHHHHHHhhCCCeEEEEEeCCCCHHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCChHH-
Confidence            578889999999999988765322455554332  33333333221     00010000             0011111 


Q ss_pred             HHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC
Q 020768          244 VEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL  289 (321)
Q Consensus       244 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  289 (321)
                       ..|.   ..++|+||||+|--...+.+...|..+.+-+++..+..
T Consensus        82 -i~W~---~~gvDiViEcTG~f~t~~~~~~hl~~gakkViiSaP~~  123 (166)
T d1gado1          82 -LKWD---EVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSK  123 (166)
T ss_dssp             -GCHH---HHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCS
T ss_pred             -CCcc---ccCCCEEEEccccccCHHHHHHHhcCCCceEEeecccc
Confidence             0121   24799999999986677788888888877777775533

>d1qopb_ c.79.1.1 (B:) Tryptophan synthase, beta-subunit {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Tryptophan synthase, beta-subunit
species: Salmonella typhimurium [TaxId: 90371]

Probab=82.35  E-value=5.6  Score=33.86  Aligned_cols=95  Identities=17%  Similarity=0.219  Sum_probs=60.8

Q ss_pred             CEEEEE-cCChhHHHHHHHHHHcCCCeEEEEeCC-----hhHHHHHHHcCCCeEEecCCCcccH----------------
Q 020768          183 TNVLIM-GAGPIGLVTMLGARAFGAPRIVIVDVD-----DYRLSVAKELGADNIVKVSTNLQDI----------------  240 (321)
Q Consensus       183 ~~vlI~-Gag~vG~~a~qla~~~g~~~vv~v~~~-----~~~~~~~~~~g~~~vi~~~~~~~~~----------------  240 (321)
                      .++++- ++|.-|.+++..|+.+|.+.+|.+...     ..+...++.+|++.+...+ ....+                
T Consensus       103 ~~iv~easaGN~g~a~A~aaa~~Gl~~~I~mp~~~~~~k~~~v~~m~~~GAeVv~v~~-g~~~l~~~~~~~~~~~~~~~~  181 (390)
T d1qopb_         103 SEIIAETGAGQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHS-GSATLKDACNEALRDWSGSYE  181 (390)
T ss_dssp             CEEEEEESSSHHHHHHHHHHHHHTCEEEEEEEHHHHHHCHHHHHHHHHTTCEEEEECS-TTSSHHHHHHHHHHHHHHHTT
T ss_pred             ceeeeehhHHHHHHHHHHHHHhccCceEEeecccccccchHHHHHHHhcCceEEEecC-CchhhhHhHHHHHHHHhhhhh
Confidence            456664 779999999999999999766666432     3446667889987654321 11000                


Q ss_pred             ---------------------------HHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccC
Q 020768          241 ---------------------------AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG  278 (321)
Q Consensus       241 ---------------------------~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~  278 (321)
                                                 .+...++....+..+|+|+-|+|+...+...+......
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~iG~e~~~q~~~~~g~~pD~vv~~vGgGs~~~G~~~~f~~~  246 (390)
T d1qopb_         182 TAHYMLGTAAGPHPYPTIVREFQRMIGEETKAQILDKEGRLPDAVIACVGGGSNAIGMFADFIND  246 (390)
T ss_dssp             TEEECCCSSCSSTTHHHHHHHTTTHHHHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHGGGTTC
T ss_pred             hhhhccccccccccccccccchhhhhcchhHHHHHHHcCCccceEEecccccchhhheecccccc
Confidence                                       01112222334667899999999987777776555443

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.29  E-value=0.68  Score=36.09  Aligned_cols=31  Identities=32%  Similarity=0.597  Sum_probs=26.0

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~  215 (321)
                      -|+|+|+|+.|+.|+..|..+|.+ |++++..
T Consensus         7 DviVIG~GpAGl~aA~~aa~~G~k-V~lie~~   37 (233)
T d1v59a1           7 DVVIIGGGPAGYVAAIKAAQLGFN-TACVEKR   37 (233)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCC-EEEEESS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCc-EEEEEec
Confidence            478899999999999999999995 6667654

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=82.28  E-value=6.7  Score=27.96  Aligned_cols=37  Identities=22%  Similarity=0.331  Sum_probs=29.3

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhHHH
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLS  220 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~~~  220 (321)
                      +|.|+|+|.+|...+..+...+. +.++..|.++++.+
T Consensus         2 KI~IIGaG~VG~~la~~l~~~~l~~el~L~Di~~~~~~   39 (142)
T d1guza1           2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQ   39 (142)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHH
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCceEEEeccccccch
Confidence            57889999999998888887764 46888888776644

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=82.23  E-value=0.93  Score=36.52  Aligned_cols=30  Identities=27%  Similarity=0.570  Sum_probs=23.1

Q ss_pred             EEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCC
Q 020768          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD  215 (321)
Q Consensus       184 ~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~  215 (321)
                      +|||+|+ |-+|...+..+...|.  +++++.+
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~--~v~~~~~   32 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN--LIALDVH   32 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE--EEEECTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC--EEEEECC
Confidence            6999999 9999998888777774  5555444

>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TRM1-like
domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=82.23  E-value=1.7  Score=37.11  Aligned_cols=93  Identities=15%  Similarity=0.169  Sum_probs=61.8

Q ss_pred             EEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCeE--------------EecCCCcccHHHHHHHH
Q 020768          187 IMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNI--------------VKVSTNLQDIAEEVEKI  247 (321)
Q Consensus       187 I~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~v--------------i~~~~~~~~~~~~~~~~  247 (321)
                      |+-+ ++.|..++.+|+..|.+.|++.|.+++..+.+++    .+....              +..  ...|....+   
T Consensus        49 vLD~~sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~--~~~Da~~~~---  123 (375)
T d2dula1          49 VLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVI--NHDDANRLM---  123 (375)
T ss_dssp             EEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEE--EESCHHHHH---
T ss_pred             EEEcCCCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEe--ehhhhhhhh---
Confidence            4444 8889999999999999889999999998888764    122110              110  011222222   


Q ss_pred             HHHhCCCccE-EEEcCCCH-HHHHHHHHHcccCCEEEEEc
Q 020768          248 QKAMGTGIDV-SFDCAGFN-KTMSTALSATRAGGKVCLVG  285 (321)
Q Consensus       248 ~~~~~~~~d~-vid~~g~~-~~~~~~~~~l~~~G~~v~~g  285 (321)
                       ...+..||+ -||..|++ ..++.+++.++.+|-+..-.
T Consensus       124 -~~~~~~fDvIDiDPfGs~~pfldsAi~a~~~~Gll~vTa  162 (375)
T d2dula1         124 -AERHRYFHFIDLDPFGSPMEFLDTALRSAKRRGILGVTA  162 (375)
T ss_dssp             -HHSTTCEEEEEECCSSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred             -HhhcCcCCcccCCCCCCcHHHHHHHHHHhccCCEEEEEe
Confidence             123567894 57788874 46779999999998877665

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=82.13  E-value=2.4  Score=31.68  Aligned_cols=84  Identities=18%  Similarity=0.186  Sum_probs=56.8

Q ss_pred             HHHHHcCC-CCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHH
Q 020768          172 HACRRANI-GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQK  249 (321)
Q Consensus       172 ~~l~~~~~-~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~  249 (321)
                      ..++..++ -.|++++|.|. ..+|.-...++...|+ .|..+.+..                     .+..+.+     
T Consensus        26 ~lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~ga-tVt~~h~~t---------------------~~l~~~~-----   78 (166)
T d1b0aa1          26 TLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGC-TTTVTHRFT---------------------KNLRHHV-----   78 (166)
T ss_dssp             HHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTC-EEEEECSSC---------------------SCHHHHH-----
T ss_pred             HHHHHcCcccccceEEEEeccccccHHHHHHHHHhhc-ccccccccc---------------------chhHHHH-----
Confidence            34454333 46999999998 7899999999999998 455553322                     1222222     


Q ss_pred             HhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCC
Q 020768          250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       250 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                         ...|+++-++|.+..+.  -+.++++..++.+|..
T Consensus        79 ---~~ADivI~a~G~p~~i~--~~~vk~g~vvIDvGi~  111 (166)
T d1b0aa1          79 ---ENADLLIVAVGKPGFIP--GDWIKEGAIVIDVGIN  111 (166)
T ss_dssp             ---HHCSEEEECSCCTTCBC--TTTSCTTCEEEECCCE
T ss_pred             ---hhhhHhhhhccCccccc--ccccCCCcEEEecCce
Confidence               23688888888765443  3577888888888864

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=82.07  E-value=0.5  Score=39.04  Aligned_cols=32  Identities=16%  Similarity=0.481  Sum_probs=27.5

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~  216 (321)
                      .|+|+|||..|+.++..+...|. .|.+++.++
T Consensus         3 dv~IIGaG~sGl~~A~~L~~~g~-~V~iiEk~~   34 (298)
T d1i8ta1           3 DYIIVGSGLFGAVCANELKKLNK-KVLVIEKRN   34 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHGGGTC-CEEEECSSS
T ss_pred             cEEEECCcHHHHHHHHHHHhCCC-cEEEEECCC
Confidence            47899999999999999988898 588887654

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=81.83  E-value=0.38  Score=36.72  Aligned_cols=34  Identities=24%  Similarity=0.378  Sum_probs=27.9

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~  215 (321)
                      ++..|+|+|+|+.|+.|+..+...|.+ +++++..
T Consensus         4 k~~dVvIIGGGpaGl~AA~~~ar~g~~-v~iie~~   37 (190)
T d1trba1           4 KHSKLLILGSGPAGYTAAVYAARANLQ-PVLITGM   37 (190)
T ss_dssp             EEEEEEEECCSHHHHHHHHHHHTTTCC-CEEECCS
T ss_pred             CCCcEEEECCCHHHHHHHHHHHHcCCc-eEEEEee
Confidence            346799999999999999999999995 5666543

>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.78  E-value=1.5  Score=35.43  Aligned_cols=105  Identities=15%  Similarity=0.139  Sum_probs=57.2

Q ss_pred             CCCCCEEEEEcCChhHHHHHHHHHH----c-CCC-eEEEEeCChhHHHHHHHc-C-C---Ce-EEecCCCcccHHHHHHH
Q 020768          179 IGPETNVLIMGAGPIGLVTMLGARA----F-GAP-RIVIVDVDDYRLSVAKEL-G-A---DN-IVKVSTNLQDIAEEVEK  246 (321)
Q Consensus       179 ~~~g~~vlI~Gag~vG~~a~qla~~----~-g~~-~vv~v~~~~~~~~~~~~~-g-~---~~-vi~~~~~~~~~~~~~~~  246 (321)
                      .++.-+||=+|+|. |..+..+++.    . +.. .+++++.+++-++.+++. . .   .. .++...  .++.+....
T Consensus        38 ~~~~~~VLDiGcG~-G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  114 (280)
T d1jqea_          38 TKSEIKILSIGGGA-GEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAWHK--ETSSEYQSR  114 (280)
T ss_dssp             TCSEEEEEEETCTT-SHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEEC--SCHHHHHHH
T ss_pred             CCCCCeEEEEcCCC-CHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhccccccccccchh--hhhhhhcch
Confidence            34444788888743 3333333332    2 221 468889998888877653 1 1   11 111111  122211111


Q ss_pred             HHH-HhCCCccEEEEc-----CCC-HHHHHHHHHHcccCCEEEEEcC
Q 020768          247 IQK-AMGTGIDVSFDC-----AGF-NKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       247 ~~~-~~~~~~d~vid~-----~g~-~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      ... .....||+|+-.     ... ...+..+.++|+++|.++..-.
T Consensus       115 ~~~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~LkpgG~l~i~~~  161 (280)
T d1jqea_         115 MLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVV  161 (280)
T ss_dssp             HTTSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             hcccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCCCEEEEEEe
Confidence            111 124679999873     223 2578899999999998877753

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=81.74  E-value=2.6  Score=31.53  Aligned_cols=100  Identities=18%  Similarity=0.198  Sum_probs=58.5

Q ss_pred             EEEEEcCChhHHHHHHHHHHc---CCCeEEEEeC--ChhHHHHHHHcCC-----CeEEecCC-------------CcccH
Q 020768          184 NVLIMGAGPIGLVTMLGARAF---GAPRIVIVDV--DDYRLSVAKELGA-----DNIVKVST-------------NLQDI  240 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~---g~~~vv~v~~--~~~~~~~~~~~g~-----~~vi~~~~-------------~~~~~  240 (321)
                      +|.|.|-|-+|.++.+.+...   .. .++++..  +.+...++-++--     +.-+..++             ...+.
T Consensus         2 kIgINGfGRIGR~v~R~~~~~~~~~i-~vvaINd~~~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~p   80 (169)
T d1hdgo1           2 RVAINGFGRIGRLVYRIIYERKNPDI-EVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDP   80 (169)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTCTTC-EEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred             EEEEECCChHHHHHHHHHHhccCCCE-EEEEeccCccHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeCCCh
Confidence            688999999999999877653   34 4555532  2344444443321     10011110             00111


Q ss_pred             HHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC
Q 020768          241 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL  289 (321)
Q Consensus       241 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  289 (321)
                      .+ + .|.+   .++|+||||+|.-...+.+...+..|-+-+++..+..
T Consensus        81 ~~-i-~W~~---~gvD~ViEcTG~f~t~~~~~~hl~~GakkViiSAP~k  124 (169)
T d1hdgo1          81 SK-L-PWKD---LGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPAK  124 (169)
T ss_dssp             GG-S-CHHH---HTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCB
T ss_pred             hh-C-Cccc---cCCCEEEEecceeccccchhhhccCCCceEEEecccC
Confidence            11 1 1221   3699999999986677788888888876677765543

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=81.65  E-value=0.77  Score=35.46  Aligned_cols=31  Identities=35%  Similarity=0.692  Sum_probs=26.1

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~  215 (321)
                      -++|+|+|+.|+.++..|...|. +|.+++..
T Consensus         5 DviVIG~GpaGl~aA~~aar~G~-kV~vIEk~   35 (223)
T d1ebda1           5 ETLVVGAGPGGYVAAIRAAQLGQ-KVTIVEKG   35 (223)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-EEEEEecC
Confidence            37888999999999999999999 57777644

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=81.48  E-value=1.5  Score=32.16  Aligned_cols=38  Identities=21%  Similarity=0.323  Sum_probs=32.0

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhH
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYR  218 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~  218 (321)
                      |..+|.|+|+|.+|...+.++...+...++..+.++++
T Consensus         2 p~~KI~IIGaG~VG~~~a~~l~~~~l~el~L~Di~~~~   39 (150)
T d1t2da1           2 PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNM   39 (150)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSH
T ss_pred             CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEeccCCc
Confidence            45689999999999988888888888888888877655

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=81.41  E-value=1.1  Score=31.49  Aligned_cols=35  Identities=20%  Similarity=0.302  Sum_probs=29.2

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~  216 (321)
                      .+.+++|.|+|.+|+-+++.+..+|. .|..+..++
T Consensus        31 ~~~~vvIiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~   65 (122)
T d1xhca2          31 NSGEAIIIGGGFIGLELAGNLAEAGY-HVKLIHRGA   65 (122)
T ss_dssp             HHSEEEEEECSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             cCCcEEEECCcHHHHHHHHHhhcccc-eEEEEeccc
Confidence            45799999999999999999999998 566666543

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=81.18  E-value=0.82  Score=35.79  Aligned_cols=32  Identities=28%  Similarity=0.551  Sum_probs=27.1

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~  216 (321)
                      -|+|+|+|+.|+.|+..|..+|. +|.+++..+
T Consensus         8 DviIIG~GPaGlsaA~~aa~~G~-~V~viE~~~   39 (229)
T d1ojta1           8 DVVVLGGGPGGYSAAFAAADEGL-KVAIVERYK   39 (229)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-eEEEEeccC
Confidence            37889999999999999999999 577777543

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=81.17  E-value=0.72  Score=37.70  Aligned_cols=32  Identities=25%  Similarity=0.344  Sum_probs=26.2

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~  215 (321)
                      .|+|+|+|.+|++++..+...|.+.|.+++.+
T Consensus         3 dViIIGaGi~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            58999999999988887777887568778654

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=80.98  E-value=0.7  Score=35.91  Aligned_cols=31  Identities=35%  Similarity=0.632  Sum_probs=26.8

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~  215 (321)
                      .++|+|+|+.|+.++..|..+|. .|.+++..
T Consensus         7 DlvVIG~GpaGl~aA~~aa~~G~-~V~liE~~   37 (220)
T d1lvla1           7 TLLIIGGGPGGYVAAIRAGQLGI-PTVLVEGQ   37 (220)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTC-CEEEECSS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-cEEEEecC
Confidence            47889999999999999999999 57777654

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=80.96  E-value=1.1  Score=36.93  Aligned_cols=32  Identities=31%  Similarity=0.485  Sum_probs=28.3

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEe
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVD  213 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~  213 (321)
                      .|.+|+|.|-|.+|..+++++...|+ +|++++
T Consensus        35 ~gktvaIqGfGnVG~~~A~~L~e~Ga-kvv~vs   66 (293)
T d1hwxa1          35 GDKTFAVQGFGNVGLHSMRYLHRFGA-KCVAVG   66 (293)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEE
Confidence            57899999999999999999999999 566664

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=80.95  E-value=0.66  Score=33.97  Aligned_cols=92  Identities=15%  Similarity=0.087  Sum_probs=53.8

Q ss_pred             CEEEEEcC-ChhHHHHHHHHHHcCC--CeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768          183 TNVLIMGA-GPIGLVTMLGARAFGA--PRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (321)
Q Consensus       183 ~~vlI~Ga-g~vG~~a~qla~~~g~--~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi  259 (321)
                      -+|.|+|| |-+|+-.++++..++.  ..+..+.++...-+... .........+...            ....+.|++|
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~-~~~~~~~~~~~~~------------~~~~~~d~vf   69 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMG-FAESSLRVGDVDS------------FDFSSVGLAF   69 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEE-ETTEEEECEEGGG------------CCGGGCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCccee-eccccchhccchh------------hhhccceEEE
Confidence            36899999 9999999999975432  23444444332211111 1111111100000            1124689999


Q ss_pred             EcCCCHHHHHHHHHHcccCCEEEEEcCC
Q 020768          260 DCAGFNKTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       260 d~~g~~~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      -+.+........-.....+.+++..+..
T Consensus        70 ~a~p~~~s~~~~~~~~~~g~~VID~Ss~   97 (144)
T d2hjsa1          70 FAAAAEVSRAHAERARAAGCSVIDLSGA   97 (144)
T ss_dssp             ECSCHHHHHHHHHHHHHTTCEEEETTCT
T ss_pred             ecCCcchhhhhccccccCCceEEeechh
Confidence            9999766666666777788888887743

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.90  E-value=0.72  Score=38.02  Aligned_cols=31  Identities=23%  Similarity=0.460  Sum_probs=26.6

Q ss_pred             EEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh
Q 020768          185 VLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (321)
Q Consensus       185 vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~  216 (321)
                      |+|+|+|..|+.++..++..|. .|.+++.++
T Consensus         2 ViVIGaG~aGL~aA~~L~~~G~-~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGGGISGMAAAKLLHDSGL-NVVVLEARD   32 (383)
T ss_dssp             EEEECCBHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             EEEECCCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence            7899999999999999999999 577877543

>d1jsxa_ c.66.1.20 (A:) Glucose-inhibited division protein B (GidB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glucose-inhibited division protein B (GidB)
domain: Glucose-inhibited division protein B (GidB)
species: Escherichia coli [TaxId: 562]

Probab=80.88  E-value=2.4  Score=32.82  Aligned_cols=96  Identities=17%  Similarity=0.198  Sum_probs=60.2

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      ++++++=+|.|+ |.-.+-+|-..--..+..++++.+|..+++    ++|.+.+.....+.++..         ....+|
T Consensus        65 ~~~~ilDiGsGa-G~PGi~laI~~p~~~~~Lves~~KK~~FL~~~~~~L~L~nv~v~~~R~E~~~---------~~~~fD  134 (207)
T d1jsxa_          65 QGERFIDVGTGP-GLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP---------SEPPFD  134 (207)
T ss_dssp             CSSEEEEETCTT-TTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC---------CCSCEE
T ss_pred             cCCceeeeeccC-CceeeehhhhcccceEEEEecchHHHHHHHHHHHHcCCcceeeeccchhhhc---------cccccc
Confidence            456766556522 444444555554347999999999988765    578765433333322211         134689


Q ss_pred             EEEE-cCCC-HHHHHHHHHHcccCCEEEEEcC
Q 020768          257 VSFD-CAGF-NKTMSTALSATRAGGKVCLVGM  286 (321)
Q Consensus       257 ~vid-~~g~-~~~~~~~~~~l~~~G~~v~~g~  286 (321)
                      +|+- +++. +..+..+...++++|+++.+=.
T Consensus       135 ~V~sRA~~~~~~ll~~~~~~l~~~g~~~~~KG  166 (207)
T d1jsxa_         135 GVISRAFASLNDMVSWCHHLPGEQGRFYALKG  166 (207)
T ss_dssp             EEECSCSSSHHHHHHHHTTSEEEEEEEEEEES
T ss_pred             eehhhhhcCHHHHHHHHHHhcCCCcEEEEECC
Confidence            8874 5555 3456677788999999999853

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=80.83  E-value=5.8  Score=30.33  Aligned_cols=97  Identities=16%  Similarity=0.094  Sum_probs=56.8

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChh---------HHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCC
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDY---------RLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTG  254 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~---------~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~  254 (321)
                      ++++.|.+.+|..+++.+...|.+.+.+++..++         -.+++++.+.......+-+++++.+.+.+      ..
T Consensus         2 kiv~~~~~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~i~~------~~   75 (203)
T d2blna2           2 KTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPLWVERIAQ------LS   75 (203)
T ss_dssp             EEEEEECHHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCCCSHHHHHHHHH------TC
T ss_pred             eEEEEecCHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHHHcCCcceecccccchhhhhhhhh------hc
Confidence            5778888889999999998889843333432222         13566777776432222222333333322      56


Q ss_pred             ccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCC
Q 020768          255 IDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG  287 (321)
Q Consensus       255 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  287 (321)
                      +|+++-+... ..+..-+--..+.|.+.+-.+.
T Consensus        76 ~Dlii~~g~~-~ii~~~il~~~~~~~iN~H~sl  107 (203)
T d2blna2          76 PDVIFSFYYR-HLIYDEILQLAPAGAFNLHGSL  107 (203)
T ss_dssp             CSEEEEESCC-SCCCHHHHTTCTTCEEEEESSC
T ss_pred             ccceeeeecc-cchhcccchhhHHHHHHHhhhc
Confidence            8999987654 3444333344567777776644

>d1xdza_ c.66.1.20 (A:) Glucose-inhibited division protein B (GidB) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glucose-inhibited division protein B (GidB)
domain: Glucose-inhibited division protein B (GidB)
species: Bacillus subtilis [TaxId: 1423]

Probab=80.63  E-value=1  Score=35.92  Aligned_cols=107  Identities=15%  Similarity=0.175  Sum_probs=63.8

Q ss_pred             CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (321)
Q Consensus       181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d  256 (321)
                      .+.+++=+|.|+ |.-.+-+|-...-..+..++++.+|..+++    ++|.+.+..+..+.+++    ... ......+|
T Consensus        70 ~~~~ilDiGSGa-GfPGi~laI~~p~~~v~Lves~~KK~~FL~~v~~~L~L~n~~i~~~R~E~~----~~~-~~~~~~~D  143 (239)
T d1xdza_          70 QVNTICDVGAGA-GFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETF----GQR-KDVRESYD  143 (239)
T ss_dssp             GCCEEEEECSSS-CTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHH----TTC-TTTTTCEE
T ss_pred             CCCeEEeecCCC-chHHHHHHHhCCCccceeecchHHHHHHHHHHHHHhCCCCcEEEeehhhhc----ccc-ccccccce
Confidence            455665556521 333334444454457999999999988865    57877655444332211    100 01134689


Q ss_pred             EEEE-cCCC-HHHHHHHHHHcccCCEEEEEcCCCCCccc
Q 020768          257 VSFD-CAGF-NKTMSTALSATRAGGKVCLVGMGHLEMTV  293 (321)
Q Consensus       257 ~vid-~~g~-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  293 (321)
                      +|+- +++. +..++.+...++++|+++.+=......++
T Consensus       144 ~v~sRAva~l~~ll~~~~~~l~~~g~~i~~KG~~~~~El  182 (239)
T d1xdza_         144 IVTARAVARLSVLSELCLPLVKKNGLFVALKAASAEEEL  182 (239)
T ss_dssp             EEEEECCSCHHHHHHHHGGGEEEEEEEEEEECC-CHHHH
T ss_pred             EEEEhhhhCHHHHHHHHhhhcccCCEEEEECCCChHHHH
Confidence            8885 5554 45677888999999999998544333333

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=80.22  E-value=8.3  Score=27.73  Aligned_cols=43  Identities=19%  Similarity=0.162  Sum_probs=28.6

Q ss_pred             CEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcC
Q 020768          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG  226 (321)
Q Consensus       183 ~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g  226 (321)
                      ++|.++|.|.+|...+.-+...|. .++.-+..++..+..++.+
T Consensus         1 ekIg~IGlG~MG~~ma~~L~~~g~-~~~~~~~~~~~~~~~~~~~   43 (156)
T d2cvza2           1 EKVAFIGLGAMGYPMAGHLARRFP-TLVWNRTFEKALRHQEEFG   43 (156)
T ss_dssp             CCEEEECCSTTHHHHHHHHHTTSC-EEEECSSTHHHHHHHHHHC
T ss_pred             CeEEEEeHHHHHHHHHHHHHhCCC-EEEEeCCHHHHHHHHHHcC
Confidence            578899999999877777666676 4554444444455555554

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=80.20  E-value=0.95  Score=32.87  Aligned_cols=37  Identities=30%  Similarity=0.453  Sum_probs=28.0

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhHHH
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLS  220 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~~~  220 (321)
                      +|.|+|+|.+|..++..+...+. +.++.+|.++++.+
T Consensus         2 KI~IIGaG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~   39 (140)
T d1a5za1           2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAE   39 (140)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHH
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCCEEEEEeccccccc
Confidence            57888999999888877776654 46888888776543

>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Phenylethanolamine N-methyltransferase, PNMTase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.20  E-value=2.8  Score=33.55  Aligned_cols=46  Identities=15%  Similarity=0.187  Sum_probs=32.2

Q ss_pred             cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH
Q 020768          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE  224 (321)
Q Consensus       177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~  224 (321)
                      .+...|.++|=+|+|+ |...+..+.... ..|++++.++.-.+.+++
T Consensus        50 ~g~~~g~~vLDiGcG~-g~~~~~~~~~~~-~~v~~~D~S~~~i~~~~~   95 (263)
T d2g72a1          50 TGEVSGRTLIDIGSGP-TVYQLLSACSHF-EDITMTDFLEVNRQELGR   95 (263)
T ss_dssp             TSCSCCSEEEEETCTT-CCGGGTTGGGGC-SEEEEECSCHHHHHHHHH
T ss_pred             CCCCCCcEEEEeccCC-CHHHHHHhcccC-CeEEEEeCCHHHHHHHHH
Confidence            3556789999999965 333333333333 479999999998888875

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=80.04  E-value=0.85  Score=36.52  Aligned_cols=31  Identities=13%  Similarity=0.230  Sum_probs=26.9

Q ss_pred             EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC
Q 020768          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (321)
Q Consensus       184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~  215 (321)
                      -|+|+|+|.+|+.++..+...|. .|++++..
T Consensus         6 DvvIIGaGi~Gls~A~~La~~G~-~V~vlE~~   36 (276)
T d1ryia1           6 EAVVIGGGIIGSAIAYYLAKENK-NTALFESG   36 (276)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-cEEEEeCC
Confidence            48999999999999999999998 58888764