Citrus Sinensis ID: 020816

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-
Protein Sequence
MKSPSLSNPLDIFEIYRRFCEIKSQNADVCIEDSYREDKESPKAKFSREALAELFNLVELTVHIRIFVFDELFKLMSQLDLMGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYRVSGSKENPGLFCSCGDSESQSCGYEDSLPGLKIFPGLKRKSSGIEQDEMESSDAHIPELTDHNHISKRSRQVARPVNQEENPPGSSGDDCMEIVRHNSPLGSAKSPCAVEGCLSKGFVGLFSARSYLQVDRGRRLSYI
Secondary Structure (PSIPRED)
cccccccccccHHHHHHHHHHccccccHHHHHHHHHccccccccEEEHHHHHHHHHHHHHHHHHHHcccccHHHHHHHccccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHcccccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccHHHHHHcccccccccccHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccHHHHHHHHHHHHHcccHHHccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcHHcccccccccccHHHHHHHHHHHHHcccccccccEccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccHccccccccccccccccccccHHHHHHcccccccccccccHHHHHccccHEEEccccEEEcccccEEEEc
Coil and Loop (DISEMBL)
mkspslsnpldIFEIYRRFCEIksqnadvciedsyredkespkakFSREALAELFNLVELTVHIRIFVFDELFKLMSQLDlmgdfsefsrfYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQWCDFVernqrhnisedtWQQVLAFSRCVhenlegydpegawpvLIDDFVEHMYrvsgskenpglfcscgdsesqscgyedslpglkifpglkrkssgieqdemessdahipeltdhnhiskrsrqvarpvnqeenppgssgddcmeivrhnsplgsakspcavegclsKGFVGLFSARSYLQVDrgrrlsyi
Flexible Loop (DISEMBL)
mkspslsnplDIFEIYRRFCEIksqnadvciedsyredkespkaKFSREALAELFNLVELTVHIRIFVFDELFKLMSQLDLMGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQWCDFVERNQrhnisedtWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYRVSGSKENPGLFCSCGDSESQSCGYEDSLPGLKIFPGLKRKSSGIEQDEMESSdahipeltdhnhiskrsrqvarpvnqeenppgssgddCMEIVRHNSPLGSAKSPCAVEGCLSKGFVGlfsarsylqvdrgrrlsyi
Low Complexity Region (SEG)
MKSPSLSNPLDIFEIYRRFCEIKSQNADVCIEDSYREDKESPKAKFSREALAELFNLVELTVHIRIFVFDELFKLMSQLDLMGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYRVSGSKENPGLFCSCGDSESQSCGYEDSLPGLKIFPGLKRKSSGIEQDEMESSDAHIPELTDHNHISKRSRQVARPVNQEENPPGSSGDDCMEIVRHNSPLGSAKSPCAVEGCLSKGFVGLFSARSYLQVDRGRRLSYI
Disordered region (IsUnstruct)
*********LDIFEIYRRFCEIKSQNADVCIE****************EALAELFNLVELTVHIRIFVFDELFKLMSQLDLMGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYRVSGSKENPGLFCSCG******************************************************************************************PCAVEGCLSKGFVGLFSARSYLQVD********
Disordered Region (DISOPRED)
*************E*YRRFCEIKSQNADVCIEDSYREDKESPKAKFSREALAELFNLVELTVHIRIFVFDELFKLMSQLDLMGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEH****************************************************************************************************************EGCLSKGFVGLFSARSYLQVDRGR*****
Disordered Region (DISEMBL)
MKSPSLSNPLDIFEIYRRFCEIKSQNADVCIEDS***********FSREALAELFNLVELTVHIRIFVFDELFKLMSQLDLMGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYRVSGSKENPGLFCSCGDSESQSCGYEDSLPGLKIFPGLKRK*************AHIPELTDHNHI*********************GDDCMEIVRHNSPLGSAKSPCAVEGCLSKGFVGLFSARSYLQVDRGRRLSYI
Disordered Region (DISPRO)
********PLDIFEIYRRFCEIKSQNADVCIEDSYREDKESPKAKFSREALAELFNLVELTVHIRIFVFDELFKLMSQLDLMGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYRVSGSKENPG*FCSCG***SQSCGYEDSLPGLKIFPGLKRK***********************************************DDCMEIVRHNSPLGSAKSPCAVEGCLSKGFVGLFSARSYLQVDRGRRLSYI
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKSPSLSNPLDIFEIYRRFCEIKSQNADVCIEDSYREDKESPKAKFSREALAELFNLVELTVHIRIFVFDELFKLMSQLDLMGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYRVSGSKENPGLFCSCGDSESQSCGYEDSLPGLKIFPGLKRKSSGIEQDEMESSDAHIPELTDHNHISKRSRQVARPVNQEENPPGSSGDDCMEIVRHNSPLGSAKSPCAVEGCLSKGFVGLFSARSYLQVDRGRRLSYI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	321	2.2.26 [Sep-21-2011]
Q9VUQ8	288	DCN1-like protein OS=Dros	yes	no	0.342	0.381	0.421	3e-21
Q6PH85	259	DCN1-like protein 2 OS=Ho	yes	no	0.308	0.382	0.424	2e-20
Q8BZJ7	259	DCN1-like protein 2 OS=Mu	yes	no	0.342	0.424	0.405	3e-20
Q96GG9	259	DCN1-like protein 1 OS=Ho	no	no	0.314	0.389	0.421	2e-19
Q5ZKU1	259	DCN1-like protein 1 OS=Ga	no	no	0.314	0.389	0.421	2e-19
Q9QZ73	259	DCN1-like protein 1 OS=Mu	no	no	0.314	0.389	0.421	2e-19
Q54GP1	249	DCN1-like protein 1 OS=Di	yes	no	0.308	0.397	0.393	1e-17
Q6C0B6	240	Defective in cullin neddy	yes	no	0.299	0.4	0.346	1e-13
Q5PPL2	237	DCN1-like protein 5 OS=Ra	no	no	0.330	0.447	0.345	2e-13
Q9CXV9	237	DCN1-like protein 5 OS=Mu	no	no	0.330	0.447	0.345	2e-13

>sp|Q9VUQ8|DCN1L_DROME DCN1-like protein OS=Drosophila melanogaster GN=CG7427 PE=1 SV=2

 Score =  102 bits (255), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 69/114 (60%), Gaps = 4/114 (3%)

Query: 70  DELFKLMSQLDLM----GDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFR 125
           D + KL ++L ++     D  +F  FY F F   ++ GQK I +  A+  W +VL+GRF+
Sbjct: 128 DSIDKLKTKLPILEQELNDAGKFKDFYHFTFNYAKDPGQKGIDLEMAIAYWCIVLSGRFK 187

Query: 126 LLNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVE 179
            L+ WC F+E   +  IS DTW  +L F+  + + +  YD EGAWPVLIDDFVE
Sbjct: 188 FLDIWCQFLEEKHKRAISRDTWNLLLDFATNIDDRMSNYDSEGAWPVLIDDFVE 241

May contribute to neddylation of cullin components of SCF-type E3 ubiquitin ligase complexes. Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.
Drosophila melanogaster (taxid: 7227)

>sp|Q6PH85|DCNL2_HUMAN DCN1-like protein 2 OS=Homo sapiens GN=DCUN1D2 PE=1 SV=1

 Score = 99.8 bits (247), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 42/99 (42%), Positives = 62/99 (62%)

Query: 82  MGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQWCDFVERNQRHN 141
           + D ++F  FY F F   +  GQK + +  AV  W+LVL+GRF+ L+ W  F+  + + +
Sbjct: 148 LKDTAKFKDFYQFTFTFAKNPGQKGLDLEMAVAYWKLVLSGRFKFLDLWNTFLMEHHKRS 207

Query: 142 ISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEH 180
           I  DTW  +L F   + +++  YD EGAWPVLIDDFVE+
Sbjct: 208 IPRDTWNLLLDFGNMIADDMSNYDEEGAWPVLIDDFVEY 246

May contribute to neddylation of cullin components of SCF-type E3 ubiquitin ligase complexes. Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.

Homo sapiens (taxid: 9606)

>sp|Q8BZJ7|DCNL2_MOUSE DCN1-like protein 2 OS=Mus musculus GN=Dcun1d2 PE=2 SV=3

 Score = 99.4 bits (246), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 45/111 (40%), Positives = 67/111 (60%), Gaps = 1/111 (0%)

Query: 82  MGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQWCDFVERNQRHN 141
           + D ++F   Y F F   +  GQK + +  AV  W+LVL+GRF+ L+ W  F+  + + +
Sbjct: 148 LKDPAKFKDLYQFTFTFAKNPGQKGLDLEMAVAYWKLVLSGRFKFLDLWNTFLLEHHKRS 207

Query: 142 ISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYR-VSGSKENP 191
           I  DTW  +L F   + ++L  YD EGAWPVLIDDFVE+    V+G + +P
Sbjct: 208 IPRDTWNLLLDFGNMIADDLSNYDEEGAWPVLIDDFVEYARPVVTGGRRSP 258

May contribute to neddylation of cullin components of SCF-type E3 ubiquitin ligase complexes. Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.

Mus musculus (taxid: 10090)

>sp|Q96GG9|DCNL1_HUMAN DCN1-like protein 1 OS=Homo sapiens GN=DCUN1D1 PE=1 SV=1

 Score = 96.7 bits (239), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 63/102 (61%), Gaps = 1/102 (0%)

Query: 88  FSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQWCDFVERNQRHNISEDTW 147
           F  FY F F   +  GQK + +  A+  W LVL GRF+ L+ W  F+  + + +I +DTW
Sbjct: 154 FKDFYQFTFNFAKNPGQKGLDLEMAIAYWNLVLNGRFKFLDLWNKFLLEHHKRSIPKDTW 213

Query: 148 QQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMY-RVSGSK 188
             +L FS  + +++  YD EGAWPVLIDDFVE    +++G+K
Sbjct: 214 NLLLDFSTMIADDMSNYDEEGAWPVLIDDFVEFARPQIAGTK 255

Part of an E3 ubiquitin ligase complex for neddylation. Required for neddylation of cullin components of E3 cullin-RING ubiquitin ligase complexes by enhancing the rate of cullins neddylation. Functions to recruit the NEDD8-charged E2 enzyme to the cullin component. Involved in the release of inhibitory effets of CAND1 on cullin-RING ligase E3 complex assembly and activity. Acts also as an oncogene facilitating malignant transformation and carcinogenic progression.

Homo sapiens (taxid: 9606)

>sp|Q5ZKU1|DCNL1_CHICK DCN1-like protein 1 OS=Gallus gallus GN=DCUN1D1 PE=2 SV=1

 Score = 96.7 bits (239), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 63/102 (61%), Gaps = 1/102 (0%)

Query: 88  FSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQWCDFVERNQRHNISEDTW 147
           F  FY F F   +  GQK + +  A+  W LVL GRF+ L+ W  F+  + + +I +DTW
Sbjct: 154 FKDFYQFTFNFAKNPGQKGLDLEMAIAYWNLVLNGRFKFLDLWNKFLLEHHKRSIPKDTW 213

Query: 148 QQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMY-RVSGSK 188
             +L FS  + +++  YD EGAWPVLIDDFVE    +++G+K
Sbjct: 214 NLLLDFSTMIADDMSNYDEEGAWPVLIDDFVEFARPQIAGTK 255

Part of an E3 ubiquitin ligase complex for neddylation. Required for neddylation of cullin components of E3 cullin-RING ubiquitin ligase complexes by enhancing the rate of cullins neddylation.

Gallus gallus (taxid: 9031)

>sp|Q9QZ73|DCNL1_MOUSE DCN1-like protein 1 OS=Mus musculus GN=Dcun1d1 PE=2 SV=1

 Score = 96.7 bits (239), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 63/102 (61%), Gaps = 1/102 (0%)

Query: 88  FSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQWCDFVERNQRHNISEDTW 147
           F  FY F F   +  GQK + +  A+  W LVL GRF+ L+ W  F+  + + +I +DTW
Sbjct: 154 FKDFYQFTFNFAKNPGQKGLDLEMAIAYWNLVLNGRFKFLDLWNKFLLEHHKRSIPKDTW 213

Query: 148 QQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMY-RVSGSK 188
             +L FS  + +++  YD EGAWPVLIDDFVE    +++G+K
Sbjct: 214 NLLLDFSSMIADDMSNYDEEGAWPVLIDDFVEFARPQIAGTK 255

Part of an E3 ubiquitin ligase complex for neddylation. Required for neddylation of cullin components of E3 cullin-RING ubiquitin ligase complexes by enhancing the rate of cullins neddylation. Functions to recruit the NEDD8-charged E2 enzyme to the cullin component. Involved in the release of inhibitory effets of CAND1 on cullin-RING ligase E3 complex assembly and activity. Acts also as an oncogene facilitating malignant transformation and carcinogenic in vivo.

Mus musculus (taxid: 10090)

>sp|Q54GP1|DCN1L_DICDI DCN1-like protein 1 OS=Dictyostelium discoideum GN=DDB_G0290025 PE=3 SV=1

 Score = 90.5 bits (223), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 39/99 (39%), Positives = 61/99 (61%)

Query: 82  MGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQWCDFVERNQRHN 141
           + + S F  FY FVF + +   QKN+++   +  W +VL  +F  L  W DF+ ++ +  
Sbjct: 145 LNNNSAFKEFYMFVFDLGKAENQKNVSLQMCIELWTIVLKSKFDNLQIWFDFLNKHHKLA 204

Query: 142 ISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEH 180
           IS+DTW   L F +  ++++  YD EGAWPVLID+FVE+
Sbjct: 205 ISKDTWNLFLDFVKIANDSITKYDSEGAWPVLIDEFVEY 243

May contribute to neddylation of cullin components of SCF-type E3 ubiquitin ligase complexes. Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.

Dictyostelium discoideum (taxid: 44689)

>sp|Q6C0B6|DCN1_YARLI Defective in cullin neddylation protein 1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=DCN1 PE=3 SV=1

 Score = 77.4 bits (189), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 2/98 (2%)

Query: 86  SEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQWCDFVERNQRHNISED 145
           ++F + Y F +    + GQ+ +    AV  WRL+L G++  L++W  FV    + NIS D
Sbjct: 141 ADFQKIYKFTYGFLLQEGQRVLPQETAVDYWRLLLTGKYEHLDKWLSFVTEKYKRNISRD 200

Query: 146 TWQQVLAFS--RCVHENLEGYDPEGAWPVLIDDFVEHM 181
            W  +  F   +    +LE YD +GAWP +ID++VE +
Sbjct: 201 AWNMLYEFMLFQAKDPSLESYDEDGAWPSVIDEYVEFL 238

May contribute to neddylation of cullin components of SCF-type E3 ubiquitin ligase complexes. Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.

Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591)

>sp|Q5PPL2|DCNL5_RAT DCN1-like protein 5 OS=Rattus norvegicus GN=Dcun1d5 PE=2 SV=1

 Score = 77.0 bits (188), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 4/110 (3%)

Query: 74  KLMSQLDLM----GDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQ 129
           KL S+ D +     D S F   Y + F   R+  Q+++ +  A +   L+L   + L + 
Sbjct: 120 KLQSRFDFLRSQLNDISSFKNIYRYAFDFARDKDQRSLDIDTAKSMLALLLGRTWPLFSV 179

Query: 130 WCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVE 179
           +  ++E+++   +++D W  VL FSR VH +L  YD +GAWPVL+D+FVE
Sbjct: 180 FYQYLEQSKYRVMNKDQWYNVLEFSRTVHADLSNYDEDGAWPVLLDEFVE 229

Rattus norvegicus (taxid: 10116)

>sp|Q9CXV9|DCNL5_MOUSE DCN1-like protein 5 OS=Mus musculus GN=Dcun1d5 PE=2 SV=1

 Score = 77.0 bits (188), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 4/110 (3%)

Query: 74  KLMSQLDLM----GDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQ 129
           KL S+ D +     D S F   Y + F   R+  Q+++ +  A +   L+L   + L + 
Sbjct: 120 KLQSRFDFLRSQLNDISSFKNIYRYAFDFARDKDQRSLDIDTAKSMLALLLGRTWPLFSV 179

Query: 130 WCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVE 179
           +  ++E+++   +++D W  VL FSR VH +L  YD +GAWPVL+D+FVE
Sbjct: 180 FYQYLEQSKYRVMNKDQWYNVLEFSRTVHADLSNYDEDGAWPVLLDEFVE 229

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	321
255582121	321	conserved hypothetical protein [Ricinus	0.971	0.971	0.700	1e-127
224080141	324	predicted protein [Populus trichocarpa]	0.962	0.953	0.647	1e-115
225452845	324	PREDICTED: uncharacterized protein LOC10	0.984	0.975	0.661	1e-112
224141405	299	predicted protein [Populus trichocarpa]	0.912	0.979	0.625	1e-108
356531764	311	PREDICTED: DCN1-like protein 2-like [Gly	0.950	0.980	0.631	1e-105
388505144	317	unknown [Lotus japonicus]	0.968	0.981	0.617	1e-101
449461941	324	PREDICTED: uncharacterized protein LOC10	0.962	0.953	0.618	2e-98
357501911	308	DCN1-like protein [Medicago truncatula]	0.925	0.964	0.598	2e-93
356568664	303	PREDICTED: DCN1-like protein 2-like [Gly	0.903	0.957	0.616	1e-92
147863458	355	hypothetical protein VITISV_033333 [Viti	0.847	0.766	0.619	3e-92

>gi|255582121|ref|XP_002531855.1| conserved hypothetical protein [Ricinus communis] gi|223528505|gb|EEF30533.1| conserved hypothetical protein [Ricinus communis]

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 222/317 (70%), Positives = 261/317 (82%), Gaps = 5/317 (1%)

Query: 7   SNPLDIFEIYRRFCEIKSQNADVCIEDSYREDKESPKAKFSREALAELFNLVELTVHIRI 66
           SN  DIFEIY R+C+I+S  A     D Y ++ +  + K SR+ALA+L   VEL VH RI
Sbjct: 6   SNWADIFEIYHRYCDIRSGKA--YDTDRYEQEDDVQQGKTSRDALAQLLKFVELRVHTRI 63

Query: 67  FVFDELFKLMSQLDLMGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRL 126
            + DEL KLMS+L+ M DFSEFSRFYDFVFF+CRENGQKNITVS+AVTAWRLVLAGRFRL
Sbjct: 64  SIVDELVKLMSKLEFMVDFSEFSRFYDFVFFICRENGQKNITVSKAVTAWRLVLAGRFRL 123

Query: 127 LNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYRVSG 186
           LNQWC+FV+ NQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYRVSG
Sbjct: 124 LNQWCEFVQENQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYRVSG 183

Query: 187 SKENPGLFCSCGDSESQSCGYEDSLPGLKIFPGLKRKSSGIEQDEMESSDAHIPELTDHN 246
           S ++   FC+CGDSESQSC +ED LPGLK+ PGLKRK   ++ +EM+SSD H+P+  D N
Sbjct: 184 SNKDSNFFCNCGDSESQSCVFEDPLPGLKVTPGLKRKLPILQDEEMDSSDYHLPDYADLN 243

Query: 247 HI--SKRSRQV-ARPVNQEENPPGSSGDDCMEIVRHNSPLGSAKSPCAVEGCLSKGFVGL 303
           H+  SKR+R +  RP++QE+NPPG+S  DCMEI++ NSPLGS KS CAVEGCLSKGF GL
Sbjct: 244 HMPNSKRNRVIFPRPLSQEDNPPGNSSSDCMEIIKQNSPLGSTKSLCAVEGCLSKGFAGL 303

Query: 304 FSARSYLQVDRGRRLSY 320
           FS R+YLQ+DR RR+SY
Sbjct: 304 FSTRTYLQLDRERRVSY 320

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224080141|ref|XP_002306030.1| predicted protein [Populus trichocarpa] gi|222848994|gb|EEE86541.1| predicted protein [Populus trichocarpa]

 Score =  419 bits (1078), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 213/329 (64%), Positives = 249/329 (75%), Gaps = 20/329 (6%)

Query: 6   LSNPLDIFEIYRRFCEIKSQNADVCIEDSYREDKESPKAKFSREALAELFNLVELTVHIR 65
           + +P  IFEIY R+ +I+S  +  C  D + E +     K SR+ALA+L  +V+L  H R
Sbjct: 1   MDSPGSIFEIYIRYHDIRSLKS--CQTDGHDEHE----GKTSRDALAQLSKIVDLKFHSR 54

Query: 66  IFVFDELFKLMSQLDLMGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFR 125
             +FDEL KLMS+L+LM DFSEFSRFYDFVFFMCRENGQKNITV++AVTAW+L+LAGRFR
Sbjct: 55  TSIFDELLKLMSKLELMADFSEFSRFYDFVFFMCRENGQKNITVNKAVTAWKLILAGRFR 114

Query: 126 LLNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPE-----------GAWPVLI 174
           LLNQWCDFV+ NQRHNISEDTWQQVLAFSRCVHENLEGYDPE           GAWPVLI
Sbjct: 115 LLNQWCDFVQENQRHNISEDTWQQVLAFSRCVHENLEGYDPEEQCLLVCFLFAGAWPVLI 174

Query: 175 DDFVEHMYRVSGSKENPGLFCSCGDSESQSCGYEDSLPGLKIFPGLKRKSSGIEQDEMES 234
           DDFVEHMYRV GS   P  FC+CGDSESQSC +ED LPGLK  PGLKRK S  + +EM S
Sbjct: 175 DDFVEHMYRVLGSNREPNFFCNCGDSESQSCTFEDPLPGLKDTPGLKRKLSSFQMEEMAS 234

Query: 235 SDAHIPELTDHNHI--SKRSRQV-ARPVNQEENPPGSSGDDCMEIVRHNSPLGSAKSPCA 291
           S+A   +    N I  SKRSR +  RP+N E+NPPG+S  D M+I + N+ LGS KSPCA
Sbjct: 235 SNAVFLDSVSPNFILNSKRSRLIDYRPLNWEDNPPGNSASDGMDITKQNNSLGSMKSPCA 294

Query: 292 VEGCLSKGFVGLFSARSYLQVDRGRRLSY 320
           VEGCLS+GF GLFS RSYLQ+DR RR+SY
Sbjct: 295 VEGCLSRGFAGLFSTRSYLQLDRERRVSY 323

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225452845|ref|XP_002283688.1| PREDICTED: uncharacterized protein LOC100264659 [Vitis vinifera] gi|296082930|emb|CBI22231.3| unnamed protein product [Vitis vinifera]

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 213/322 (66%), Positives = 250/322 (77%), Gaps = 6/322 (1%)

Query: 5   SLSNPLDIFEIYRRFCEIKSQNADVCIEDSYREDKESPKAKFSREALAELFNLVELTVHI 64
           S S   D+FEIYR +C+I S NA +C+E+  + D+E  +AKF RE LA+L  LVE  V+ 
Sbjct: 4   SGSRGFDVFEIYRSYCDIISGNAYICVEEGCQGDEELQRAKFLREGLAQLLKLVESRVYT 63

Query: 65  RIFVFDELFKLMSQLDLMGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRF 124
            + +FDEL +LM +LDL  DFSEFSRFYDFVFFMCREN QKNITVSRA+TAWR+ LAGRF
Sbjct: 64  GVSIFDELLRLMLRLDLTVDFSEFSRFYDFVFFMCRENSQKNITVSRAITAWRIALAGRF 123

Query: 125 RLLNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYRV 184
           RLLNQWCDFVE+NQRHNISEDTW+QVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYR+
Sbjct: 124 RLLNQWCDFVEKNQRHNISEDTWRQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYRI 183

Query: 185 SGSKENPGLFCSCGDSESQSCGYEDSLPGLKIFPGLKRK-SSGIEQDEMESSDAHIPELT 243
           +GS +N   FC+CGDSE QSC Y+DSLPGLK +PGLKRK     ++ E+  SD    +  
Sbjct: 184 AGSDDNAKFFCNCGDSEGQSCEYDDSLPGLKFYPGLKRKLHEDSQRHELVLSDTRFRDSI 243

Query: 244 DHNHI--SKRSRQ--VARPVNQEENPPGSSGDDCMEIVRHNSPLGSAKSPCAVEGCLSKG 299
           D N    SKRS+Q  +A      E+PPG++ DDCMEIV+H SPL S+KSPCAVEGCLSKG
Sbjct: 244 DLNDKLNSKRSKQSLIAGRSVYSEHPPGAATDDCMEIVKH-SPLSSSKSPCAVEGCLSKG 302

Query: 300 FVGLFSARSYLQVDRGRRLSYI 321
           F GLFS  S L  DR RR+SYI
Sbjct: 303 FAGLFSTPSCLHFDRERRVSYI 324

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224141405|ref|XP_002324063.1| predicted protein [Populus trichocarpa] gi|222867065|gb|EEF04196.1| predicted protein [Populus trichocarpa]

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 197/315 (62%), Positives = 235/315 (74%), Gaps = 22/315 (6%)

Query: 6   LSNPLDIFEIYRRFCEIKSQNADVCIEDSYREDKESPKAKFSREALAELFNLVELTVHIR 65
           + +P  IFEIYRR+C+I+S  +  C      E  E+ K K SR++LA+L   V+L  H R
Sbjct: 1   MHSPDSIFEIYRRYCDIRSVKS--C---QVNEPDETRKGKSSRDSLAQLLKFVDLKFHSR 55

Query: 66  IFVFDELFKLMSQLDLMGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFR 125
           I +FDEL KLMS+L+LM DFSEFSRFYDFVFFMCRENGQ+NITV++AV+AW+LVLAGRFR
Sbjct: 56  IKIFDELLKLMSKLELMADFSEFSRFYDFVFFMCRENGQRNITVNKAVSAWKLVLAGRFR 115

Query: 126 LLNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYRVS 185
           LLNQWCDF E NQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYR+ 
Sbjct: 116 LLNQWCDFQE-NQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYRIL 174

Query: 186 GSKENPGLFCSCGDSESQSCGYEDSLPGLKIFPGLKRKSSGIEQDEMESSDAHIPELTDH 245
           GS + P  FC+CGDSES+ C +ED LPGLK+ PGLKRK    + +EM+ SDA  P+ T  
Sbjct: 175 GSNKEPNFFCNCGDSESRPCTFEDPLPGLKVAPGLKRKLPSFQDEEMDCSDALFPDSTRP 234

Query: 246 NHISKRSRQVARPVNQEENPPGSSGDDCMEIVRHNSPLGSAKSPCAVEGCLSKGFVGLFS 305
           NHI                    +  DCM+I + N+ +GS KSPCAVEGCLS+GF  +FS
Sbjct: 235 NHILN----------------SKTTSDCMDINKLNNSMGSTKSPCAVEGCLSRGFAVVFS 278

Query: 306 ARSYLQVDRGRRLSY 320
            RS LQ+DR RR+SY
Sbjct: 279 TRSCLQLDRDRRVSY 293

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531764|ref|XP_003534446.1| PREDICTED: DCN1-like protein 2-like [Glycine max]

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 197/312 (63%), Positives = 235/312 (75%), Gaps = 7/312 (2%)

Query: 10  LDIFEIYRRFCEIKSQNADVCIEDSYREDKESPKAKFSREALAELFNLVELTVHIRIFVF 69
           +DIFEIYRR+C+IKS +A +  E+ YR+D +  KAK SREAL +L  LVE  V   + +F
Sbjct: 6   IDIFEIYRRYCDIKSGHAYIGGEEGYRQDSDIQKAKVSREALTQLSKLVESRVTTGVTIF 65

Query: 70  DELFKLMSQLDLMGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQ 129
           DEL  LMS+L+L  DF EFSRFYDFVFFMCRENGQKNITVSRAVTAW+LVLAGRF LL+ 
Sbjct: 66  DELSMLMSRLNLRADFPEFSRFYDFVFFMCRENGQKNITVSRAVTAWKLVLAGRFSLLHP 125

Query: 130 WCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYRVSGS-K 188
           WCDFVE+NQR+NISEDTWQQVLAFS C  ++LE YDPEGAWPVLIDDFVEHMYR+ GS  
Sbjct: 126 WCDFVEKNQRYNISEDTWQQVLAFSWCTRDSLEAYDPEGAWPVLIDDFVEHMYRMQGSYY 185

Query: 189 ENPGLFCSCGDSESQSCGYEDSLPGLKIFPGLKRKSSGIEQDEMESSDAHIPELTDHNHI 248
           +N    C+CGD ESQSC ++D LPGL+ F GLKRK   + +D  +S D    ++   N  
Sbjct: 186 DNSNFHCNCGDPESQSCVFDDPLPGLRSFSGLKRK---LPEDLSKSDDMDSNDMILSN-- 240

Query: 249 SKRSRQVARPVNQEENPPGSSGDDCMEIVRHNSPLGSAKSPCAVEGCLSKGFVGLFSARS 308
            KRSR     V+ E+NPPG++ DDCME  R NSPL S+ SPCAVEGCLSKGF GL S RS
Sbjct: 241 CKRSR-AHDAVDLEDNPPGNTADDCMETSRQNSPLCSSMSPCAVEGCLSKGFAGLLSTRS 299

Query: 309 YLQVDRGRRLSY 320
           ++Q  R RR S+
Sbjct: 300 FVQFGRERRASF 311

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388505144|gb|AFK40638.1| unknown [Lotus japonicus]

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 195/316 (61%), Positives = 233/316 (73%), Gaps = 5/316 (1%)

Query: 7   SNPLDIFEIYRRFCEIKSQNADVCIEDSYREDKESPKAKFSREALAELFNLVELTVHIRI 66
           S+ +DIFEIYRR+C+I+S +A V  E+ YR+  +  KAK SREAL +L  LVE  V   +
Sbjct: 4   SSRIDIFEIYRRYCDIRSGHAYVVGEEGYRQHSDFHKAKVSREALTQLSKLVEARVSTGV 63

Query: 67  FVFDELFKLMSQLDLMGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRL 126
            +FDEL  LMS+LDLM DFS FSRFY+FVFFMCRENGQKNITVSRAVTAW+LVLAGRF L
Sbjct: 64  TIFDELSMLMSRLDLMVDFSAFSRFYEFVFFMCRENGQKNITVSRAVTAWKLVLAGRFPL 123

Query: 127 LNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYRVSG 186
           L+QWC+FVE+NQR+NISEDTWQQVLAF+ C  +NLE YDPEGAWPVLIDDFVEHMYR+ G
Sbjct: 124 LHQWCEFVEKNQRYNISEDTWQQVLAFTWCTRDNLEAYDPEGAWPVLIDDFVEHMYRIQG 183

Query: 187 SKENPGLF-CSCGDSESQSCGYEDSLPGLKIFPGLKRK-SSGIEQDEMESSDAHIPELTD 244
           S  +   F C+CGD+ESQSC  ED LPGL+    LKRK       ++ME S A   EL  
Sbjct: 184 SYYDYSNFRCNCGDTESQSCVLEDPLPGLRSVSVLKRKLPEETSNNDMEHSSAS-DELIS 242

Query: 245 HNHISKRSRQVARPVNQEENPPGSSGDDCMEIVRHNSPLGSAKSPCAVEGCLSKGFVGLF 304
            N   KRSR       ++ +P G++ +DCME  R NSPL S+KS CAVEGCLSKGF GL 
Sbjct: 243 SN--CKRSRAHGAVDWEDHDPLGNTSEDCMETSRQNSPLCSSKSQCAVEGCLSKGFAGLL 300

Query: 305 SARSYLQVDRGRRLSY 320
           S RS++Q  R RR S+
Sbjct: 301 STRSFVQFGRERRASF 316

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449461941|ref|XP_004148700.1| PREDICTED: uncharacterized protein LOC101214663 [Cucumis sativus] gi|449517217|ref|XP_004165642.1| PREDICTED: uncharacterized LOC101214663 [Cucumis sativus]

 Score =  365 bits (936), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 196/317 (61%), Positives = 230/317 (72%), Gaps = 8/317 (2%)

Query: 8   NPLDIFEIYRRFCEIKSQNADVCIEDSYREDKESPKAKFSREALAELFNLVELTVHIRIF 67
           N  DI +IYR++C+I+SQN     EDS   + E+   K S++ALAEL   V+ ++ +   
Sbjct: 11  NRFDIVQIYRQYCDIRSQNGYHGNEDS--GNAETQMCKSSKQALAELLIYVQSSLQMGNS 68

Query: 68  VFDELFKLMSQLDLMGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLL 127
           V  EL KLMS L+ M DFSEFSRFY+FVFF+CRENGQKNITVS AV AWRLVL GRFRLL
Sbjct: 69  VVYELSKLMSYLNFMVDFSEFSRFYEFVFFVCRENGQKNITVSMAVRAWRLVLDGRFRLL 128

Query: 128 NQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYRVSGS 187
           NQWCDFVE NQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYR SGS
Sbjct: 129 NQWCDFVENNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYRRSGS 188

Query: 188 KENPGLFCSCGDSESQSCGYEDSLPGLKIFPGLKRK-SSGIEQDEMES-SDAHIP--ELT 243
            +   L C+CGDSE +S  +EDSL GLK FPGLKRK    ++ D + S SD      E T
Sbjct: 189 NKVSKLSCNCGDSE-ESGVFEDSLSGLKFFPGLKRKLPEDMQMDGIVSPSDPRTSAMEFT 247

Query: 244 DHNHISKRSRQVARPVNQEENPPGSSGDDCMEIVRHNSPLGSAKSPCAVEGCLSKGFVGL 303
               + K      RPVN E N P  +  + +E+VRHNS +GS KSPCAVEGCLSKGF GL
Sbjct: 248 PVTSVKKSRFMACRPVNLEINSPSCTAAENIEMVRHNSTVGS-KSPCAVEGCLSKGFAGL 306

Query: 304 FSARSYLQVDRGRRLSY 320
           FS R +L +D+ R+ S+
Sbjct: 307 FSTRLFLGLDQERKASF 323

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357501911|ref|XP_003621244.1| DCN1-like protein [Medicago truncatula] gi|355496259|gb|AES77462.1| DCN1-like protein [Medicago truncatula]

 Score =  348 bits (892), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 185/309 (59%), Positives = 222/309 (71%), Gaps = 12/309 (3%)

Query: 11  DIFEIYRRFCEIKSQNADVCIEDSYREDKESPKAKFSREALAELFNLVELTVHIRIFVFD 70
           DIF IYRRFC+IKS +A V  E+ YR+D +  KAKFSREAL +L  LVE  V     +FD
Sbjct: 7   DIFNIYRRFCDIKSGHAFVVGEEGYRQDSDFQKAKFSREALTQLSKLVESRVCTGATIFD 66

Query: 71  ELFKLMSQLDLMGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQW 130
           EL  LMS+L LM  FSEFSRFY+FVFFMCRENGQKNITVS+A+TAW+LVL GRF LL  W
Sbjct: 67  ELSILMSRLGLMATFSEFSRFYEFVFFMCRENGQKNITVSKALTAWKLVLNGRFPLLQPW 126

Query: 131 CDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYRVSGS-KE 189
           CDFVE+NQR+NISEDTWQQVL+FS C  ++L+ YDPEGAWPVLIDDFVEHMYR  GS  E
Sbjct: 127 CDFVEKNQRYNISEDTWQQVLSFSICTRDSLDAYDPEGAWPVLIDDFVEHMYRQPGSYYE 186

Query: 190 NPGLFCSCGDSESQSCGYEDSLPGLKIFPGLKRK-SSGIEQDEMESSDAHIPELTDHNHI 248
           N  + C+CGD ES       S+PGLK F GLKRK +    +D+ME S +   E+   N  
Sbjct: 187 NSNIHCNCGDPESL------SIPGLKSFAGLKRKLAEEARKDDMEYSYSS-EEMNTANCK 239

Query: 249 SKRSRQVARPVNQEENPPGSSGDDCMEIVRHNSPLGSAKSPCAVEGCLSKGFVGLFSARS 308
             R+  V   V+ E+NP G++ ++CME  R +SPL S+KS C+VEG LSKGF GL S  S
Sbjct: 240 KSRAYGV---VDCEDNPQGNAAEECMETSRQSSPLCSSKSQCSVEGSLSKGFAGLLSTSS 296

Query: 309 YLQVDRGRR 317
           YL+  R RR
Sbjct: 297 YLRFGRERR 305

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356568664|ref|XP_003552530.1| PREDICTED: DCN1-like protein 2-like [Glycine max]

 Score =  345 bits (886), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 183/297 (61%), Positives = 220/297 (74%), Gaps = 7/297 (2%)

Query: 10  LDIFEIYRRFCEIKSQNADVCIEDSYREDKESPKAKFSREALAELFNLVELTVHIRIFVF 69
           +DIFEIYRR+C+IKS +A +  E+ YR+D +  KAK SREAL +L  LVE  V   + +F
Sbjct: 6   IDIFEIYRRYCDIKSGHAYIGGEEGYRQDSDLQKAKVSREALTQLSKLVESRVTTGVTIF 65

Query: 70  DELFKLMSQLDLMGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQ 129
           DEL  LMS+L+L  DFSEFSRFYDFVFFMCRENGQKNITVSRAV AW+LVLAGRF LL+ 
Sbjct: 66  DELSMLMSRLNLRADFSEFSRFYDFVFFMCRENGQKNITVSRAVNAWKLVLAGRFSLLHP 125

Query: 130 WCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYRVSGS-K 188
           WCDFVE+NQR+NI EDTWQQVLAFS   H++L+ YDPEGAWPVLIDDFVEH++R+ GS  
Sbjct: 126 WCDFVEKNQRYNIFEDTWQQVLAFSGFTHDSLDAYDPEGAWPVLIDDFVEHVHRMLGSYY 185

Query: 189 ENPGLFCSCGDSESQSCGYEDSLPGLKIFPGLKRKSSGIEQDEMESSDAHIPELTDHNHI 248
           +N  L C+C D ESQS  ++D LPGL IF GLKRK   +  D  +S D    ++   N  
Sbjct: 186 DNSNLHCNCDDPESQSWVFDDPLPGLTIFSGLKRK---LPDDSSKSDDMDSNDMIFSN-- 240

Query: 249 SKRSRQVARPVNQEENPPGSSGDDCMEIVRHNSPLGSAKSPCAVEGCLSKGFVGLFS 305
            KRSR      + E+NPPG++  DCME  R NSPL S+ SPCAVEGCLSKGF GL +
Sbjct: 241 CKRSR-AHDAEDLEDNPPGNTAYDCMETSRQNSPLCSSMSPCAVEGCLSKGFAGLLN 296

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147863458|emb|CAN79787.1| hypothetical protein VITISV_033333 [Vitis vinifera]

 Score =  344 bits (883), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 181/292 (61%), Positives = 217/292 (74%), Gaps = 20/292 (6%)

Query: 5   SLSNPLDIFEIYRRFCEIKSQNADVCIEDSYREDKESPKAKFSREALAELFNLVELTVH- 63
           S S   D+FEIYR +C+I S NA +C+E+  + D+E  +AKF RE LA+L  LVE  V+ 
Sbjct: 4   SGSRGFDVFEIYRSYCDIISGNAYICVEEGCQGDEELQRAKFLREGLAQLLKLVESRVYT 63

Query: 64  --------------IRIFVFDELFKLMSQLDLMGDFSEFSRFYDFVFFMCRENGQKNITV 109
                         +++ +FDEL +LM +LDL  DFSEFSRFYDFVFFMCREN QKNITV
Sbjct: 64  GYRLFEPYMRHLEILKVSIFDELLRLMLRLDLTVDFSEFSRFYDFVFFMCRENSQKNITV 123

Query: 110 SRAVTAWRLVLAGRFRLLNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGA 169
           SRA+TAWR+ LAGRFRLLNQWCDFVE+NQRHNISEDTW+QVLAFSRCVHENLEGYDPEGA
Sbjct: 124 SRAITAWRIALAGRFRLLNQWCDFVEKNQRHNISEDTWRQVLAFSRCVHENLEGYDPEGA 183

Query: 170 WPVLIDDFVEHMYRVSGSKENPGLFCSCGDSESQSCGYEDSLPGLKIFPGLKRK-SSGIE 228
           WPVLIDDFVEHMYR++GS +N   FC+CGDSE+QSC Y+DSLPGLK +PGLKRK     +
Sbjct: 184 WPVLIDDFVEHMYRIAGSDDNAKFFCNCGDSEAQSCEYDDSLPGLKFYPGLKRKLHEDSQ 243

Query: 229 QDEMESSDAHIPELTDHNHI--SKRSRQ--VARPVNQEENPPGSSGDDCMEI 276
           + E+  SD    +  D N    SKRS+Q  +A      ENPPG++ DDCMEI
Sbjct: 244 RHELVLSDTRFRDSIDLNDKLNSKRSKQSLIAGRSVYSENPPGAATDDCMEI 295

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	321
TAIR|locus:2087022	295	AAR3 "AT3G28970" [Arabidopsis	0.875	0.952	0.544	6.6e-81
UNIPROTKB|F1NPG9	258	DCUN1D1 "DCN1-like protein 1"	0.370	0.461	0.395	8.8e-23
UNIPROTKB|Q5ZKU1	259	DCUN1D1 "DCN1-like protein 1"	0.370	0.459	0.395	8.8e-23
TAIR|locus:2087720	250	AT3G12760 "AT3G12760" [Arabido	0.392	0.504	0.407	7e-22
MGI|MGI:2142792	259	Dcun1d2 "DCN1, defective in cu	0.570	0.706	0.316	1.9e-21
ZFIN|ZDB-GENE-030131-5443	282	dcun1d1 "DCN1, defective in cu	0.370	0.421	0.406	1.9e-21
UNIPROTKB|F1MDM6	244	DCUN1D1 "Uncharacterized prote	0.551	0.725	0.316	1.3e-20
UNIPROTKB|E2QV42	262	DCUN1D1 "Uncharacterized prote	0.551	0.675	0.316	1.3e-20
UNIPROTKB|Q96GG9	259	DCUN1D1 "DCN1-like protein 1"	0.551	0.683	0.316	1.3e-20
UNIPROTKB|I3L7H0	259	DCUN1D1 "Uncharacterized prote	0.551	0.683	0.316	1.3e-20

TAIR|locus:2087022 AAR3 "AT3G28970" [Arabidopsis thaliana (taxid:3702)]

 Score = 812 (290.9 bits), Expect = 6.6e-81, P = 6.6e-81
 Identities = 171/314 (54%), Positives = 209/314 (66%)

Query:     1 MKSPSLSNPLDIFEIYRRFCEIKSQNADVCIEDSYREDKESPKAKFSREALAELFNLVEL 60
             M S  +S   DIFEIYRRFC I+S    +C +    + +ES +   S+EA+ +L  LVE 
Sbjct:     1 MDSSPVSARFDIFEIYRRFCAIRS-GQQLCNKKPC-DGEESQRFNLSKEAITQLLYLVEN 58

Query:    61 TVHIRIFVFDELFKLMSQLDLMGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVL 120
                 R  +FDELFKLMS+LDLM DF+EF+ FYDFVFFMCRENGQKNIT+SRA+TAW+LVL
Sbjct:    59 KFQARNSIFDELFKLMSRLDLMVDFTEFTCFYDFVFFMCRENGQKNITISRAITAWKLVL 118

Query:   121 AGRFRLLNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEH 180
             AGRFRLLN+WCDF+E+NQRHNISEDTWQQVLAFSRCVHENLEGYD EGAWPVLIDDFVEH
Sbjct:   119 AGRFRLLNRWCDFIEKNQRHNISEDTWQQVLAFSRCVHENLEGYDSEGAWPVLIDDFVEH 178

Query:   181 MYRVSGSKENPGLFCSCGDSESQSCGYEDS-------LP--GLKIFPGLKRKSSGIEQDE 231
             MY + G  ++  LFC CGD+ES+SC Y++         P  GL+  PGLKRK+S    +E
Sbjct:   179 MYSILGPNKDTSLFCKCGDTESESCLYQEDEHHKDYRRPHTGLRNIPGLKRKTSKKNDEE 238

Query:   232 MESSDAHIPELTDHNHISKRSRQVARPVNQEENPPGSSGDDCMEIVRHNSPLGSAKSPCA 291
              E  D  + E  + + +    R                      I   NSP  S+KSPC+
Sbjct:   239 EEDEDEEVLETQNSSSLLNFKR----------------------IKTSNSPRCSSKSPCS 276

Query:   292 VEGCLSKGFVGLFS 305
             +E  LS+GF  L S
Sbjct:   277 IERSLSQGFASLLS 290

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM;ISS

GO:0009734 "auxin mediated signaling pathway" evidence=IMP

UNIPROTKB|F1NPG9 DCUN1D1 "DCN1-like protein 1" [Gallus gallus (taxid:9031)]

 Score = 241 (89.9 bits), Expect = 8.8e-23, Sum P(2) = 8.8e-23
 Identities = 49/124 (39%), Positives = 73/124 (58%)

Query:    70 DELFKLMSQLDLMG-DFSE---FSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFR 125
             D + KL +Q+  M  +  E   F  FY F F   +  GQK + +  A+  W LVL GRF+
Sbjct:   131 DSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIAYWNLVLNGRFK 190

Query:   126 LLNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMY-RV 184
              L+ W  F+  + + +I +DTW  +L FS  + +++  YD EGAWPVLIDDFVE    ++
Sbjct:   191 FLDLWNKFLLEHHKRSIPKDTWNLLLDFSTMIADDMSNYDEEGAWPVLIDDFVEFARPQI 250

Query:   185 SGSK 188
             +G+K
Sbjct:   251 AGTK 254

GO:0000151 "ubiquitin ligase complex" evidence=IEA

UNIPROTKB|Q5ZKU1 DCUN1D1 "DCN1-like protein 1" [Gallus gallus (taxid:9031)]

 Score = 241 (89.9 bits), Expect = 8.8e-23, Sum P(2) = 8.8e-23
 Identities = 49/124 (39%), Positives = 73/124 (58%)

Query:    70 DELFKLMSQLDLMG-DFSE---FSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFR 125
             D + KL +Q+  M  +  E   F  FY F F   +  GQK + +  A+  W LVL GRF+
Sbjct:   132 DSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIAYWNLVLNGRFK 191

Query:   126 LLNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMY-RV 184
              L+ W  F+  + + +I +DTW  +L FS  + +++  YD EGAWPVLIDDFVE    ++
Sbjct:   192 FLDLWNKFLLEHHKRSIPKDTWNLLLDFSTMIADDMSNYDEEGAWPVLIDDFVEFARPQI 251

Query:   185 SGSK 188
             +G+K
Sbjct:   252 AGTK 255

GO:0000151 "ubiquitin ligase complex" evidence=IEA

TAIR|locus:2087720 AT3G12760 "AT3G12760" [Arabidopsis thaliana (taxid:3702)]

 Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
 Identities = 55/135 (40%), Positives = 78/135 (57%)

Query:    55 FNLVELTVHIRIFVFDELFKLMSQLDLMG----DFSEFSRFYDFVFFMCRENGQKNITVS 110
             F+  E    ++    D + KL  +L  M     D  +F   Y+F F   +E GQK++ + 
Sbjct:   111 FSRQEFISGLQALGVDSIGKLQEKLPFMRSELKDEQKFHEIYNFAFGWAKEKGQKSLALD 170

Query:   111 RAVTAWRLVLAGR-FRLLNQWCDFVERNQRHN--ISEDTWQQVLAFSRCVHENLEGYDPE 167
              A+  W+L+ A R + L+  WCDF++   RHN  IS+DTW Q+L FSR V   L  YD E
Sbjct:   171 TAIGMWQLLFAEREWPLVTHWCDFLQ--DRHNKAISKDTWAQLLEFSRMVDPVLSNYDAE 228

Query:   168 GAWPVLIDDFVEHMY 182
             GAWP LID+FVE++Y
Sbjct:   229 GAWPYLIDEFVEYLY 243

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

MGI|MGI:2142792 Dcun1d2 "DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae)" [Mus musculus (taxid:10090)]

 Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
 Identities = 61/193 (31%), Positives = 103/193 (53%)

Query:     2 KSPSLSNPLDIFEIYRRFCEIKSQN-ADVCIEDSYREDKESPKAKFSREALAELFNLVEL 60
             K P   N + I  I ++FC+  S + A + +     + + + + +FS++   +   + EL
Sbjct:    73 KDPQDENKIGIDGI-QQFCDDLSLDPASISVLVIAWKFRAATQCEFSKKEFVD--GMTEL 129

Query:    61 TVHIRIFVFDELFKLMSQLDL-MGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLV 119
                      + L  L+ +L+  + D ++F   Y F F   +  GQK + +  AV  W+LV
Sbjct:   130 GCDST----ERLKALLPRLEQELKDPAKFKDLYQFTFTFAKNPGQKGLDLEMAVAYWKLV 185

Query:   120 LAGRFRLLNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVE 179
             L+GRF+ L+ W  F+  + + +I  DTW  +L F   + ++L  YD EGAWPVLIDDFVE
Sbjct:   186 LSGRFKFLDLWNTFLLEHHKRSIPRDTWNLLLDFGNMIADDLSNYDEEGAWPVLIDDFVE 245

Query:   180 HMYRV-SGSKENP 191
             +   V +G + +P
Sbjct:   246 YARPVVTGGRRSP 258

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-030131-5443 dcun1d1 "DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)" [Danio rerio (taxid:7955)]

 Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
 Identities = 50/123 (40%), Positives = 71/123 (57%)

Query:    70 DELFKLMSQLDLMG----DFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFR 125
             D + KL +QL  M     D  +F  FY F F   +  GQK + +  A+  W L+LAGRF+
Sbjct:   156 DSIEKLKAQLPRMEQELKDQGKFKDFYQFTFNFAKNPGQKGLDLEMAIAYWNLILAGRFK 215

Query:   126 LLNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYRVS 185
              L+ W  F+  + + +I +DTW  +L FS  + +++  YD EGAWPVLIDDFVE      
Sbjct:   216 FLDLWNKFLLEHHKRSIPKDTWNLLLDFSTMITDDMSNYDEEGAWPVLIDDFVEFARPCI 275

Query:   186 GSK 188
             G+K
Sbjct:   276 GTK 278

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|F1MDM6 DCUN1D1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
 Identities = 61/193 (31%), Positives = 101/193 (52%)

Query:     2 KSPSLSNPLDIFEIYRRFCE-IKSQNADVCIEDSYREDKESPKAKFSREALAELFNLVEL 60
             K P   N + I  I ++FC+ +    A + +     + + + + +FS++   +   + EL
Sbjct:    58 KDPQDENKIGIDGI-QQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEFMD--GMTEL 114

Query:    61 TVHIRIFVFDELFKLMSQLDLMG-DFSE---FSRFYDFVFFMCRENGQKNITVSRAVTAW 116
                      D + KL +Q+  M  +  E   F  FY F F   +  GQK + +  A+  W
Sbjct:   115 GC-------DSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIAYW 167

Query:   117 RLVLAGRFRLLNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDD 176
              LVL GRF+ L+ W  F+  + + +I +DTW  +L FS  + +++  YD EGAWPVLIDD
Sbjct:   168 NLVLNGRFKFLDLWNKFLLEHHKRSIPKDTWNLLLDFSTMIADDMSNYDEEGAWPVLIDD 227

Query:   177 FVEHMY-RVSGSK 188
             FVE    +++G+K
Sbjct:   228 FVEFARPQIAGTK 240

GO:0000151 "ubiquitin ligase complex" evidence=IEA

UNIPROTKB|E2QV42 DCUN1D1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
 Identities = 61/193 (31%), Positives = 101/193 (52%)

Query:     2 KSPSLSNPLDIFEIYRRFCE-IKSQNADVCIEDSYREDKESPKAKFSREALAELFNLVEL 60
             K P   N + I  I ++FC+ +    A + +     + + + + +FS++   +   + EL
Sbjct:    76 KDPQDENKIGIDGI-QQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEFMD--GMTEL 132

Query:    61 TVHIRIFVFDELFKLMSQLDLMG-DFSE---FSRFYDFVFFMCRENGQKNITVSRAVTAW 116
                      D + KL +Q+  M  +  E   F  FY F F   +  GQK + +  A+  W
Sbjct:   133 GC-------DSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIAYW 185

Query:   117 RLVLAGRFRLLNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDD 176
              LVL GRF+ L+ W  F+  + + +I +DTW  +L FS  + +++  YD EGAWPVLIDD
Sbjct:   186 NLVLNGRFKFLDLWNKFLLEHHKRSIPKDTWNLLLDFSTMIADDMSNYDEEGAWPVLIDD 245

Query:   177 FVEHMY-RVSGSK 188
             FVE    +++G+K
Sbjct:   246 FVEFARPQIAGTK 258

GO:0000151 "ubiquitin ligase complex" evidence=IEA

UNIPROTKB|Q96GG9 DCUN1D1 "DCN1-like protein 1" [Homo sapiens (taxid:9606)]

 Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
 Identities = 61/193 (31%), Positives = 101/193 (52%)

Query:     2 KSPSLSNPLDIFEIYRRFCE-IKSQNADVCIEDSYREDKESPKAKFSREALAELFNLVEL 60
             K P   N + I  I ++FC+ +    A + +     + + + + +FS++   +   + EL
Sbjct:    73 KDPQDENKIGIDGI-QQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEFMD--GMTEL 129

Query:    61 TVHIRIFVFDELFKLMSQLDLMG-DFSE---FSRFYDFVFFMCRENGQKNITVSRAVTAW 116
                      D + KL +Q+  M  +  E   F  FY F F   +  GQK + +  A+  W
Sbjct:   130 GC-------DSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIAYW 182

Query:   117 RLVLAGRFRLLNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDD 176
              LVL GRF+ L+ W  F+  + + +I +DTW  +L FS  + +++  YD EGAWPVLIDD
Sbjct:   183 NLVLNGRFKFLDLWNKFLLEHHKRSIPKDTWNLLLDFSTMIADDMSNYDEEGAWPVLIDD 242

Query:   177 FVEHMY-RVSGSK 188
             FVE    +++G+K
Sbjct:   243 FVEFARPQIAGTK 255

GO:0008150 "biological_process" evidence=ND

GO:0000151 "ubiquitin ligase complex" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|I3L7H0 DCUN1D1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
 Identities = 61/193 (31%), Positives = 101/193 (52%)

Query:     2 KSPSLSNPLDIFEIYRRFCE-IKSQNADVCIEDSYREDKESPKAKFSREALAELFNLVEL 60
             K P   N + I  I ++FC+ +    A + +     + + + + +FS++   +   + EL
Sbjct:    73 KDPQDENKIGIDGI-QQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEFMD--GMTEL 129

Query:    61 TVHIRIFVFDELFKLMSQLDLMG-DFSE---FSRFYDFVFFMCRENGQKNITVSRAVTAW 116
                      D + KL +Q+  M  +  E   F  FY F F   +  GQK + +  A+  W
Sbjct:   130 GC-------DSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIAYW 182

Query:   117 RLVLAGRFRLLNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDD 176
              LVL GRF+ L+ W  F+  + + +I +DTW  +L FS  + +++  YD EGAWPVLIDD
Sbjct:   183 NLVLNGRFKFLDLWNKFLLEHHKRSIPKDTWNLLLDFSTMIADDMSNYDEEGAWPVLIDD 242

Query:   177 FVEHMY-RVSGSK 188
             FVE    +++G+K
Sbjct:   243 FVEFARPQIAGTK 255

GO:0000151 "ubiquitin ligase complex" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	321
pfam03556	117	pfam03556, Cullin_binding, Cullin binding	3e-39

>gnl|CDD|217613 pfam03556, Cullin_binding, Cullin binding

 Score =  134 bits (339), Expect = 3e-39
 Identities = 47/110 (42%), Positives = 68/110 (61%), Gaps = 3/110 (2%)

Query: 74  KLMSQLDLMGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGR-FRLLNQWCD 132
           +L S+L    D  +F   Y F F   RE GQK++ +  A+  W+L+   R F LL+QW +
Sbjct: 10  ELRSELK--SDPEKFKDLYRFTFDFAREEGQKSLDLETAIEYWKLLFGSRTFPLLDQWIE 67

Query: 133 FVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMY 182
           F+E   + +IS+DTW  +L FS+ + E+L  YD EGAWP LID+FVE + 
Sbjct: 68  FLEEKHKKSISKDTWNMLLEFSKTIDEDLSNYDEEGAWPSLIDEFVEWLK 117

This domain binds to cullins and to Rbx-1, components of an E3 ubiquitin ligase complex for neddylation. Neddylation is the process by which the C-terminal glycine of the ubiquitin-like protein Nedd8 is covalently linked to lysine residues in a protein through an isopeptide bond. The structure of this domain is composed entirely of alpha helices. Length = 117

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	321
KOG3077	260	consensus Uncharacterized conserved protein [Funct	100.0
PF03556	117	Cullin_binding: Cullin binding; InterPro: IPR00517	100.0
KOG3077	260	consensus Uncharacterized conserved protein [Funct	98.05

>KOG3077 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=6.2e-46  Score=347.23  Aligned_cols=182  Identities=26%  Similarity=0.493  Sum_probs=161.3

Q ss_pred             CCChhHHHHHHHHHhccccc-------ccccccccCccCCCCCCcccccHHHHH-----HHHhhhhhhhhccccchHHHH
Q 020816            6 LSNPLDIFEIYRRFCEIKSQ-------NADVCIEDSYREDKESPKAKFSREALA-----ELFNLVELTVHIRIFVFDELF   73 (321)
Q Consensus         6 ~~~~~dL~~lF~rY~D~~s~-------i~~lC~dLgv~~d~dVm~a~iSre~~t-----~L~~~~dg~~~lgc~tiDsLk   73 (321)
                      ..+...++++|.+|+|+..+       +.+||+||||+|++.+++.-.++.+++     ..-+|..|+..+||+|+|+|+
T Consensus        60 ~~s~~~l~~~f~~y~d~~d~~~i~~dgi~~fc~dlg~~p~~i~~LvlAwkl~A~~m~~Fsr~ef~~g~~~l~~dS~d~lq  139 (260)
T KOG3077|consen   60 RVSEKRLEELFNQYKDPDDDNLIGPDGIEKFCEDLGVEPEDISVLVLAWKLGAATMCEFSREEFLKGMTALGCDSIDKLQ  139 (260)
T ss_pred             cccHHHHHHHHHHhcCcccccccChHHHHHHHHHhCCCchhHHHHHHHHHhccchhhhhhHHHHHHHHHHcCCCcHHHHH
Confidence            35567899999999999884       999999999999654443322222211     122469999999999999999


Q ss_pred             HHHHhcc-ccCChhhhhhhhhhhhhcccccCcccccHHHHHHHHHHhhcCccccHHHHHHHHHhhcCCccCHHhHHHHHH
Q 020816           74 KLMSQLD-LMGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQWCDFVERNQRHNISEDTWQQVLA  152 (321)
Q Consensus        74 kLl~~L~-l~~D~~~Fk~fY~FtF~fare~gQKsL~letAIa~W~LLL~~~f~~Ld~W~~FL~~~~~k~ISkDtW~q~l~  152 (321)
                      ..++.+. .++|.++|+.+|+|||+|++++|||+|++++||+||+|||+.++|+|++|++||++++++.|+||||+|+|+
T Consensus       140 ~~l~~l~~~l~d~~~Fk~iY~faf~fa~e~~qk~Ld~~~ai~~w~ll~~~~~pll~~w~~FL~~~~~~~~~KDtW~~~l~  219 (260)
T KOG3077|consen  140 QRLDFLRSVLKDLEKFKSIYRFAFNFAKEPGQKSLDLETAISLWKLLFGQTPPLLDQWIQFLKDSPNRAISKDTWNLLLD  219 (260)
T ss_pred             HHHHHHHHHHccHHHhhHHHHhhhhhccCcCcCcCCHHHHHHHHHHHhCCCCchHHHHHHHHHhCcCcccCcccHHHHHH
Confidence            9999998 566999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhcccCCCCCCCCCCchHHHHHHHHHHHhhCC
Q 020816          153 FSRCVHENLEGYDPEGAWPVLIDDFVEHMYRVSGS  187 (321)
Q Consensus       153 F~~~v~~dls~YDe~gAWP~LIDEFVE~~r~~~gs  187 (321)
                      |++++++|+|||||+||||+||||||||.|.+...
T Consensus       220 Fs~~i~~dlSnYDeegAWP~liDeFVe~~r~~~~~  254 (260)
T KOG3077|consen  220 FSKTIDPDLSNYDEEGAWPVLIDEFVEYLRDKQSN  254 (260)
T ss_pred             HHHhcCccccCccccccchHHHHHHHHHHHHhccC
Confidence            99999999999999999999999999999988754

>PF03556 Cullin_binding: Cullin binding; InterPro: IPR005176 The eukaryotic defective in cullin neddylation (DCN) protein family, may contribute to neddylation of cullin components of SCF-type E3 ubiquitin ligase complexes

Probab=100.00  E-value=8.9e-43  Score=292.55  Aligned_cols=114  Identities=44%  Similarity=0.880  Sum_probs=102.8

Q ss_pred             hHHHHHHHHhcc--ccCChhhhhhhhhhhhhcccccCcccccHHHHHHHHHHhhcCc-cccHHHHHHHHHhhcCCccCHH
Q 020816           69 FDELFKLMSQLD--LMGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGR-FRLLNQWCDFVERNQRHNISED  145 (321)
Q Consensus        69 iDsLkkLl~~L~--l~~D~~~Fk~fY~FtF~fare~gQKsL~letAIa~W~LLL~~~-f~~Ld~W~~FL~~~~~k~ISkD  145 (321)
                      |++|++.+++|.  +.+|+++|++||+|||+|+|++|||+|++|+||+||+|||+++ ++++++|++||+++++++||||
T Consensus         1 I~~lk~~l~~l~~~l~~d~~~F~~~Y~f~F~~~~~~~qr~l~~e~Ai~~W~llf~~~~~~~l~~w~~Fl~~~~~k~IskD   80 (117)
T PF03556_consen    1 IDKLKQKLPELRKELRSDPEYFKKFYRFTFDFAREEGQRSLPLETAIAYWRLLFSGRFFPLLDSWIEFLEEKYKKAISKD   80 (117)
T ss_dssp             HHHHHHCHHHHHHHCCHSHHHHHHHHHHHHHHHS-TT-SSEEHHHHHHHHHHHTTTTSSCCHHHHHHHHHHCT-SEEEHH
T ss_pred             CHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHhCCcccCCCCHHHHHHHHHHHcCCCCcHHHHHHHHHHHHcCCcCcChh
Confidence            678888899887  6779999999999999999999999999999999999999988 8999999999999999999999


Q ss_pred             hHHHHHHHHhhhcccCCCCCCCCCCchHHHHHHHHHH
Q 020816          146 TWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMY  182 (321)
Q Consensus       146 tW~q~l~F~~~v~~dls~YDe~gAWP~LIDEFVE~~r  182 (321)
                      ||+|+++|++++++++++|||+||||+||||||||+|
T Consensus        81 ~W~~~l~F~~~~~~dls~Yde~~AWP~liDeFVe~~r  117 (117)
T PF03556_consen   81 TWNQFLDFFKTVDEDLSNYDEEGAWPSLIDEFVEWLR  117 (117)
T ss_dssp             HHHHHHHHHHH-HCCHCC--TTSSS-HHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCccccCCCCCCCCcHHHHHHHHHhC
Confidence            9999999999999999999999999999999999997

These multi-protein complexes are required for polyubiquitination and subsequent degradation of target proteins by the 26S proteasome []. Proteins in the DCN family include: Yeast DCN1. Vertebrate DCN1-like protein 1. Vertebrate DCN1-like protein 2. Vertebrate DCN1-like protein 4. This entry represents a domain found within DCN family proteins. Its function is unknown but it has been suggested that it has the features of a basic helix-loop-helix leucine zipper (bHLH-ZIP) domain [].It is often found in association with a UBA-like domain (IPR009060 from INTERPRO).; PDB: 3TDI_A 2IS9_A 3O6B_E 3O2P_A 3BQ3_A 3TDZ_A 3TDU_B.

>KOG3077 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.05  E-value=6.5e-07  Score=85.12  Aligned_cols=166  Identities=16%  Similarity=0.021  Sum_probs=111.6

Q ss_pred             CCh-hhhhhhhhhhhhcccccCcccccHHHHHHHHHHhhcCccccHHHHHHHHHhhcCCccCHHhHHHHHHHHhhhcccC
Q 020816           83 GDF-SEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENL  161 (321)
Q Consensus        83 ~D~-~~Fk~fY~FtF~fare~gQKsL~letAIa~W~LLL~~~f~~Ld~W~~FL~~~~~k~ISkDtW~q~l~F~~~v~~dl  161 (321)
                      .|| +.+.-+|...+.||.+-|+...++.++|-+|++. ++++..+..|.-+-.-+....+|-|+|++.|+|.+++..|+
T Consensus        74 ~d~~d~~~i~~dgi~~fc~dlg~~p~~i~~LvlAwkl~-A~~m~~Fsr~ef~~g~~~l~~dS~d~lq~~l~~l~~~l~d~  152 (260)
T KOG3077|consen   74 KDPDDDNLIGPDGIEKFCEDLGVEPEDISVLVLAWKLG-AATMCEFSREEFLKGMTALGCDSIDKLQQRLDFLRSVLKDL  152 (260)
T ss_pred             cCcccccccChHHHHHHHHHhCCCchhHHHHHHHHHhc-cchhhhhhHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHccH
Confidence            454 2389999999999999999999999999999999 88877787876665556678999999999999999998899


Q ss_pred             CCCCCCCCCchHHHHHHHHHHHhhCCCCCCCcccCCCCCCCCccccC---------CCCCCCccCCCccccCCCCCcccc
Q 020816          162 EGYDPEGAWPVLIDDFVEHMYRVSGSKENPGLFCSCGDSESQSCGYE---------DSLPGLKIFPGLKRKSSGIEQDEM  232 (321)
Q Consensus       162 s~YDe~gAWP~LIDEFVE~~r~~~gs~~~~~~~~~~~~~~~~~~~~~---------~~~~g~~~~~g~~~~~~~~~~~~~  232 (321)
                      +.|+.-.+||..|+.  |..++..+....-...|-|+ .++..|...         ++.-| +-++++++..+...+.++
T Consensus       153 ~~Fk~iY~faf~fa~--e~~qk~Ld~~~ai~~w~ll~-~~~~pll~~w~~FL~~~~~~~~~-KDtW~~~l~Fs~~i~~dl  228 (260)
T KOG3077|consen  153 EKFKSIYRFAFNFAK--EPGQKSLDLETAISLWKLLF-GQTPPLLDQWIQFLKDSPNRAIS-KDTWNLLLDFSKTIDPDL  228 (260)
T ss_pred             HHhhHHHHhhhhhcc--CcCcCcCCHHHHHHHHHHHh-CCCCchHHHHHHHHHhCcCcccC-cccHHHHHHHHHhcCccc
Confidence            999888777766554  32222222111122223333 222222210         22333 788899888877666666


Q ss_pred             ccccCCCccccchhhH--hhhhh
Q 020816          233 ESSDAHIPELTDHNHI--SKRSR  253 (321)
Q Consensus       233 ~~~~~~~~~~~~~~~~--~k~~~  253 (321)
                      +.-|.+-.-....-.+  .+|.|
T Consensus       229 SnYDeegAWP~liDeFVe~~r~~  251 (260)
T KOG3077|consen  229 SNYDEEGAWPVLIDEFVEYLRDK  251 (260)
T ss_pred             cCccccccchHHHHHHHHHHHHh
Confidence            6655433222222222  77777

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	321
4gao_A	200	Dcnl Complex With N-terminally Acetylated Nedd8 E2		1e-21
3tdu_A	200	N-Terminal Acetylation Acts As An Avidity Enhancer		2e-20
3kev_A	199	X-Ray Crystal Structure Of A Dcun1 Domain-Containin		1e-19
4gba_A	221	Dcnl Complex With N-terminally Acetylated Nedd8 E2		3e-09
3bq3_A	270	Crystal Structure Of S. Cerevisiae Dcn1 Length = 27		7e-09
2is9_A	204	Structure Of Yeast Dcn-1 Length = 204		9e-09
3o2p_A	202	A Dual E3 Mechanism For Rub1 Ligation To Cdc53: Dcn		1e-08

>pdb|4GAO|A Chain A, Dcnl Complex With N-terminally Acetylated Nedd8 E2 Peptide Length = 200

Iteration: 1
 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 42/99 (42%), Positives = 62/99 (62%)
Query: 82  MGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQWCDFVERNQRHN 141
           + D ++F  FY F F   +  GQK + +  AV  W+LVL+GRF+ L+ W  F+  + + +
Sbjct: 89  LKDTAKFKDFYQFTFTFAKNPGQKGLDLEMAVAYWKLVLSGRFKFLDLWNTFLMEHHKRS 148
Query: 142 ISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEH 180
           I  DTW  +L F   + +++  YD EGAWPVLIDDFVE+
Sbjct: 149 IPRDTWNLLLDFGNMIADDMSNYDEEGAWPVLIDDFVEY 187

>pdb|3TDU|A Chain A, N-Terminal Acetylation Acts As An Avidity Enhancer Within An Interconnected Multiprotein Complex: Structure Of A Human Cul1whb- Dcn1p-Acetylated Ubc12n Complex Length = 200

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
Query: 88  FSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQWCDFVERNQRHNISEDTW 147
           F  FY F F   +  GQK + +  A+  W LVL GRF+ L+ W  F+  + + +I +DTW
Sbjct: 95  FKDFYQFTFNFAKNPGQKGLDLEMAIAYWNLVLNGRFKFLDLWNKFLLEHHKRSIPKDTW 154
Query: 148 QQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMY-RVSGSK 188
             +L FS  + +++  YD EGAWPVLIDDFVE    +++G+K
Sbjct: 155 NLLLDFSTMIADDMSNYDEEGAWPVLIDDFVEFARPQIAGTK 196

>pdb|3KEV|A Chain A, X-Ray Crystal Structure Of A Dcun1 Domain-Containing Protein From Galdieria Sulfuraria Length = 199

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 91/168 (54%), Gaps = 8/168 (4%)
Query: 15  IYRRFCEIKSQNADVCIEDSYREDKESPKAKFSREALAELFNLVELTVHIRIFVFDELFK 74
           + R F +I+   +DV       + K S   +FS +        VE   ++++   ++L +
Sbjct: 29  LQRLFEDIQVDPSDVVTLVLAWKLKASSTXEFSEK------EFVEGLANLQVDSLEKLKR 82
Query: 75  LMSQL-DLMGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQWCDF 133
            +S L   + D S+F  FY FVF   +E  Q+++    A   W ++L GRF LL+ W +F
Sbjct: 83  KLSSLRKEIEDPSKFRAFYQFVFQYSKEPSQRSLPAETAXALWDVLLRGRFSLLDSWLEF 142
Query: 134 VERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHM 181
           + +N  H+IS DTW  +  FS+   ++L  YD  GAWPVLIDDFV+ +
Sbjct: 143 L-KNNTHSISRDTWNLLYDFSQLSEKDLSDYDENGAWPVLIDDFVKWL 189

>pdb|4GBA|A Chain A, Dcnl Complex With N-terminally Acetylated Nedd8 E2 Peptide Length = 221

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 75  LMSQLDLMGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLA-GRFRLLNQWCDF 133
           L+++      F +  RF  F F +  E GQ+++    A+  W+LV       +L+QW +F
Sbjct: 86  LLTEAKQEDKFKDLYRF-TFQFGLDSEEGQRSLHREIAIALWKLVFTQNNPPVLDQWLNF 144
Query: 134 VERNQR--HNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVE-HMYRVSGSKEN 190
           +  N      IS DTW   L F++ +  +L  Y  + AWP L D FVE  M R     E 
Sbjct: 145 LTENPSGIKGISRDTWNMFLNFTQVIGPDLSNYSEDEAWPSLFDTFVEWEMERRKREGEG 204
Query: 191 PGLFCS 196
            G   S
Sbjct: 205 RGALSS 210

>pdb|2IS9|A Chain A, Structure Of Yeast Dcn-1 Length = 204

Iteration: 1
 Score = 57.4 bits (137), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 9/108 (8%)
Query: 81  LMGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRF------RLLNQWCDFV 134
           L  D   F++ Y++ F +  +  +K+I     +  W+L     +       LL  W  F+
Sbjct: 91  LHEDLQYFTQIYNYAFNLILDPNRKDIDTDEGIQYWKLFFQPEYPVRMEPDLLEAWFRFL 150
Query: 135 ERNQRHNISEDTWQQVLAFSR---CVHENLEGYDPEGAWPVLIDDFVE 179
               +  IS+DTW+ +L F +    + + +  YD   AWP +ID+F E
Sbjct: 151 RDEGKTTISKDTWRMLLLFFKRYPTIQKIISDYDETAAWPFIIDEFYE 198

>pdb|3O2P|A Chain A, A Dual E3 Mechanism For Rub1 Ligation To Cdc53: Dcn1(P)-Cdc53(Whb) Length = 202

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 9/108 (8%)
Query: 81  LMGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRF------RLLNQWCDFV 134
           L  D   F++ Y++ F +  +  +K+I     +  W+L     +       LL  W  F+
Sbjct: 89  LHEDLQYFTQIYNYAFNLILDPNRKDIDTDEGIQYWKLFFQPEYPVRMEPDLLEAWFRFL 148
Query: 135 ERNQRHNISEDTWQQVLAFSR---CVHENLEGYDPEGAWPVLIDDFVE 179
               +  IS+DTW+ +L F +    + + +  YD   AWP +ID+F E
Sbjct: 149 RDEGKTTISKDTWRMLLLFFKRYPTIQKIISDYDETAAWPFIIDEFYE 196

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	321
3tdu_A	200	DCN1-like protein 1; E2:E3, ligase-protein binding	9e-41
3kev_A	199	Galieria sulfuraria DCUN1 domain-containing prote;	3e-40
3bq3_A	270	Defective in cullin neddylation protein 1; ubiquit	3e-35

>3tdu_A DCN1-like protein 1; E2:E3, ligase-protein binding complex; 1.50A {Homo sapiens} PDB: 3tdz_A Length = 200

 Score =  140 bits (353), Expect = 9e-41
 Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 13/196 (6%)

Query: 11  DIFEIYRRFCEIKSQNA-DVCIEDSYREDKESPKAKFSREALAELFN-----------LV 58
            + ++Y R+ + + +N   +     + +D     A  S   +A  F             +
Sbjct: 5   KLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEFM 64

Query: 59  ELTVHIRIFVFDELFKLMSQLD-LMGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWR 117
           +    +     ++L   + +++  + +   F  FY F F   +  GQK + +  A+  W 
Sbjct: 65  DGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIAYWN 124

Query: 118 LVLAGRFRLLNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDF 177
           LVL GRF+ L+ W  F+  + + +I +DTW  +L FS  + +++  YD EGAWPVLIDDF
Sbjct: 125 LVLNGRFKFLDLWNKFLLEHHKRSIPKDTWNLLLDFSTMIADDMSNYDEEGAWPVLIDDF 184

Query: 178 VEHMYRVSGSKENPGL 193
           VE         ++  +
Sbjct: 185 VEFARPQIAGTKSTTV 200

>3kev_A Galieria sulfuraria DCUN1 domain-containing prote; cullin, neddylation, DCN-1, center for eukaryotic structural genomics, PSI; HET: CSO MSE; 1.30A {Galdieria sulphuraria} Length = 199

 Score =  138 bits (350), Expect = 3e-40
 Identities = 57/195 (29%), Positives = 89/195 (45%), Gaps = 13/195 (6%)

Query: 7   SNPLDIFEIYRRFCEIKSQNADVCIEDSYREDKESPKAKFSREALAEL--------FNLV 58
           ++   I E+++ + E               ED +   +      LA          F+  
Sbjct: 4   ADKKAILELFQTYKEPLGNYIGAEGLQRLFEDIQVDPSDVVTLVLAWKLKASSTCEFSEK 63

Query: 59  ELTVHIRIFVFDELFKLMSQLD----LMGDFSEFSRFYDFVFFMCRENGQKNITVSRAVT 114
           E    +     D L KL  +L      + D S+F  FY FVF   +E  Q+++    A+ 
Sbjct: 64  EFVEGLANLQVDSLEKLKRKLSSLRKEIEDPSKFRAFYQFVFQYSKEPSQRSLPAETAMA 123

Query: 115 AWRLVLAGRFRLLNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLI 174
            W ++L GRF LL+ W +F++ N   +IS DTW  +  FS+   ++L  YD  GAWPVLI
Sbjct: 124 LWDVLLRGRFSLLDSWLEFLKNNTH-SISRDTWNLLYDFSQLSEKDLSDYDENGAWPVLI 182

Query: 175 DDFVEHMYRVSGSKE 189
           DDFV+ +     +K 
Sbjct: 183 DDFVKWLKHEQPNKH 197

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	321
3kev_A	199	Galieria sulfuraria DCUN1 domain-containing prote;	100.0
3tdu_A	200	DCN1-like protein 1; E2:E3, ligase-protein binding	100.0
4gba_A	221	DCN1-like protein 3; E3 ligase, ligase-peptide com	100.0
3bq3_A	270	Defective in cullin neddylation protein 1; ubiquit	100.0

>3kev_A Galieria sulfuraria DCUN1 domain-containing prote; cullin, neddylation, DCN-1, center for eukaryotic structural genomics, PSI; HET: CSO MSE; 1.30A {Galdieria sulphuraria}

Probab=100.00  E-value=3e-54  Score=389.67  Aligned_cols=176  Identities=31%  Similarity=0.590  Sum_probs=154.9

Q ss_pred             CCChhHHHHHHHHHhccccc------ccccccccCccCCCCC-----------CcccccHHHHHHHHhhhhhhhhccccc
Q 020816            6 LSNPLDIFEIYRRFCEIKSQ------NADVCIEDSYREDKES-----------PKAKFSREALAELFNLVELTVHIRIFV   68 (321)
Q Consensus         6 ~~~~~dL~~lF~rY~D~~s~------i~~lC~dLgv~~d~dV-----------m~a~iSre~~t~L~~~~dg~~~lgc~t   68 (321)
                      +++.++|++||++|+|++++      ++++|+||||+|+..+           ..++|||++|      ++|+..+||+|
T Consensus         3 ~~~~~~l~~lF~~Y~d~~~~~I~~dG~~~~~~DLgv~ped~~~LvLaw~l~a~~~g~ftr~ef------~~G~~~l~~ds   76 (199)
T 3kev_A            3 RADKKAILELFQTYKEPLGNYIGAEGLQRLFEDIQVDPSDVVTLVLAWKLKASSTCEFSEKEF------VEGLANLQVDS   76 (199)
T ss_dssp             -CCHHHHHHHHHHHCCTTSSEECHHHHHHHHHHTTCCTTSHHHHHHHHHTTCCSTTCEEHHHH------HHHHHHTTCCS
T ss_pred             ccCHHHHHHHHHHhcCCCcCccCHHHHHHHHHHcCCChhhHHHHHHHHHcCCCccCcccHHHH------HHHHHHhCCCC
Confidence            46788999999999998653      8999999999996433           3458999988      88999999999


Q ss_pred             hHHHHHHHHhcc-ccCChhhhhhhhhhhhhcccccCcccccHHHHHHHHHHhhcCccccHHHHHHHHHhhcCCccCHHhH
Q 020816           69 FDELFKLMSQLD-LMGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQWCDFVERNQRHNISEDTW  147 (321)
Q Consensus        69 iDsLkkLl~~L~-l~~D~~~Fk~fY~FtF~fare~gQKsL~letAIa~W~LLL~~~f~~Ld~W~~FL~~~~~k~ISkDtW  147 (321)
                      +++|++.++.|. .++|+.+|++||+|||+|+|++|||+|++||||+||+|||+++||++++|++||++++ |+||||||
T Consensus        77 i~~lk~~l~~l~~~l~d~~~Fk~~Y~ftF~~~re~gqk~L~~e~Ai~~W~lll~~~~~~l~~W~~FL~~~~-k~IskD~W  155 (199)
T 3kev_A           77 LEKLKRKLSSLRKEIEDPSKFRAFYQFVFQYSKEPSQRSLPAETAMALWDVLLRGRFSLLDSWLEFLKNNT-HSISRDTW  155 (199)
T ss_dssp             HHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHSCTTCSSBCHHHHHHHHHHHHTTTCTTHHHHHHHGGGCC-SCBCHHHH
T ss_pred             HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHcCcCcCCCCHHHHHHHHHHHhCCccHHHHHHHHHHHhcC-CCcCHHHH
Confidence            999999999997 4689999999999999999999999999999999999999999999999999999888 99999999


Q ss_pred             HHHHHHHhhhcccCCCCCCCCCCchHHHHHHHHHHHhhCCC
Q 020816          148 QQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYRVSGSK  188 (321)
Q Consensus       148 ~q~l~F~~~v~~dls~YDe~gAWP~LIDEFVE~~r~~~gs~  188 (321)
                      +|||+|+++|++++++|||+||||+||||||||+|++.+.+
T Consensus       156 ~~~l~F~~~i~~dls~YDe~gAWP~liDeFVe~~r~~~~~~  196 (199)
T 3kev_A          156 NLLYDFSQLSEKDLSDYDENGAWPVLIDDFVKWLKHEQPNK  196 (199)
T ss_dssp             HHHHHHHTC--CTTTTCC---CCCHHHHHHHHHHTTC----
T ss_pred             HHHHHHHHHhcccccCCCCCCCchHHHHHHHHHHHHcCCCc
Confidence            99999999999999999999999999999999999876654

>3tdu_A DCN1-like protein 1; E2:E3, ligase-protein binding complex; 1.50A {Homo sapiens} PDB: 3tdz_A 4gao_A*

Probab=100.00  E-value=4.6e-54  Score=388.70  Aligned_cols=174  Identities=28%  Similarity=0.601  Sum_probs=160.4

Q ss_pred             ChhHHHHHHHHHhccccc-------ccccccccCccCCCCC-----------CcccccHHHHHHHHhhhhhhhhccccch
Q 020816            8 NPLDIFEIYRRFCEIKSQ-------NADVCIEDSYREDKES-----------PKAKFSREALAELFNLVELTVHIRIFVF   69 (321)
Q Consensus         8 ~~~dL~~lF~rY~D~~s~-------i~~lC~dLgv~~d~dV-----------m~a~iSre~~t~L~~~~dg~~~lgc~ti   69 (321)
                      +.++|++||++|+|+++.       ++++|+||||+|++.+           ..++|||++|      ++|+..+||+|+
T Consensus         2 ~~~~l~~lF~~Y~d~~~~d~I~~dG~~~~~~DLgv~ped~~~Lvlaw~l~a~~~g~ftr~ef------~~G~~~l~~dsi   75 (200)
T 3tdu_A            2 SRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEF------MDGMTELGCDSI   75 (200)
T ss_dssp             CHHHHHHHHHHHEETTEEEEECHHHHHHHHHHHTCCTTSHHHHHHHHHTTCSSTTCEEHHHH------HHHHHHHTCSSH
T ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCChhhHHHHHHHHHcCCCccCccCHHHH------HHHHHHHccccH
Confidence            357899999999998642       9999999999996543           3458999988      889999999999


Q ss_pred             HHHHHHHHhcc-ccCChhhhhhhhhhhhhcccccCcccccHHHHHHHHHHhhcCccccHHHHHHHHHhhcCCccCHHhHH
Q 020816           70 DELFKLMSQLD-LMGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQWCDFVERNQRHNISEDTWQ  148 (321)
Q Consensus        70 DsLkkLl~~L~-l~~D~~~Fk~fY~FtF~fare~gQKsL~letAIa~W~LLL~~~f~~Ld~W~~FL~~~~~k~ISkDtW~  148 (321)
                      ++|++.+++|. .++|+.+|++||+|||+|+|++|||+|++|+||+||+|||+++|++|++|++||+++++|+||||||+
T Consensus        76 ~~lk~~l~~l~~~l~d~~~Fk~~Y~ftF~~~r~~gqk~L~~e~Ai~~W~lll~~~~~~l~~W~~FL~~~~~k~IskD~W~  155 (200)
T 3tdu_A           76 EKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIAYWNLVLNGRFKFLDLWNKFLLEHHKRSIPKDTWN  155 (200)
T ss_dssp             HHHHHTHHHHHHHTTSHHHHHHHHHHHHHHHSCTTCSSEEHHHHHHHHHHHSTTSCTTHHHHHHHHHHTTCCEECHHHHH
T ss_pred             HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHcCcCcCcCCHHHHHHHHHHHcCCCchHHHHHHHHHHhcCCcCcCHhHHH
Confidence            99999999997 45799999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhcccCCCCCCCCCCchHHHHHHHHHHHhhCC
Q 020816          149 QVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYRVSGS  187 (321)
Q Consensus       149 q~l~F~~~v~~dls~YDe~gAWP~LIDEFVE~~r~~~gs  187 (321)
                      |||+|+++|++||++|||+||||+||||||||+|++...
T Consensus       156 ~~l~F~~~i~~dls~YDe~gAWP~liDeFVew~r~~~~~  194 (200)
T 3tdu_A          156 LLLDFSTMIADDMSNYDEEGAWPVLIDDFVEFARPQIAG  194 (200)
T ss_dssp             HHHHHHHHCCTTCTTCCTTSSCCHHHHHHHHHHHHHCC-
T ss_pred             HHHHHHHHhcccccCCCCCCCchHHHHHHHHHHHHHhcc
Confidence            999999999999999999999999999999999988653

>4gba_A DCN1-like protein 3; E3 ligase, ligase-peptide complex; HET: AME; 2.40A {Homo sapiens}

Probab=100.00  E-value=8.6e-53  Score=385.47  Aligned_cols=178  Identities=24%  Similarity=0.447  Sum_probs=159.4

Q ss_pred             CCChhHHHHHHHHHhccccc------ccccccccCccCCCCC-----------CcccccHHHHHHHHhhhhhhhhccccc
Q 020816            6 LSNPLDIFEIYRRFCEIKSQ------NADVCIEDSYREDKES-----------PKAKFSREALAELFNLVELTVHIRIFV   68 (321)
Q Consensus         6 ~~~~~dL~~lF~rY~D~~s~------i~~lC~dLgv~~d~dV-----------m~a~iSre~~t~L~~~~dg~~~lgc~t   68 (321)
                      +++..+|++||++|+|++.+      +++||+||||+|+..+           ..++|||++|      ++|+..+||+|
T Consensus         2 ~~~~~~l~~lF~~Y~d~~~d~I~~eGi~~l~~DLgv~ped~~~LvLAw~l~A~~mg~ftr~eF------~~G~~~l~~ds   75 (221)
T 4gba_A            2 SSSLQRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEF------FDGCKAISADS   75 (221)
T ss_dssp             ----CHHHHHHHTTSCSSSSEECHHHHHHHHHHTTCCTTSHHHHHHHHHTTCCSTTCEEHHHH------HHHHHHHTCSS
T ss_pred             CCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHcCCChhhHHHHHHHHHhCCCccCcCcHHHH------HHHHHHhCcCC
Confidence            45667899999999997543      9999999999996433           2458999988      88999999999


Q ss_pred             hHHHHHHHHhcc-ccCChhhhhhhhhhhhhcccc--cCcccccHHHHHHHHHHhhcC-ccccHHHHHHHHHhh--cCCcc
Q 020816           69 FDELFKLMSQLD-LMGDFSEFSRFYDFVFFMCRE--NGQKNITVSRAVTAWRLVLAG-RFRLLNQWCDFVERN--QRHNI  142 (321)
Q Consensus        69 iDsLkkLl~~L~-l~~D~~~Fk~fY~FtF~fare--~gQKsL~letAIa~W~LLL~~-~f~~Ld~W~~FL~~~--~~k~I  142 (321)
                      +++|++.++.|. .++|+.+||+||+|||.|+|+  +|||+|++|+||+||+|||++ +||+|++|++||+++  .+|+|
T Consensus        76 i~~lk~~l~~L~~~l~d~~~Fk~~Y~ftF~~~~~~e~gqk~L~le~Ai~~W~Lll~~~~~~~l~~W~~FL~~~~~~~k~I  155 (221)
T 4gba_A           76 IDGICARFPSLLTEAKQEDKFKDLYRFTFQFGLDSEEGQRSLHREIAIALWKLVFTQNNPPVLDQWLNFLTENPSGIKGI  155 (221)
T ss_dssp             HHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHSCTTTTCSSEEHHHHHHHHHHHTTTCCCTTHHHHHHHHHHCTTCCCEE
T ss_pred             HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhcCCccccCCCHHHHHHHHHHHcCCCCcHHHHHHHHHHHhcCCCCCCc
Confidence            999999999997 348999999999999999999  999999999999999999998 899999999999987  37999


Q ss_pred             CHHhHHHHHHHHhhhcccCCCCCCCCCCchHHHHHHHHHHHhhCCCC
Q 020816          143 SEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYRVSGSKE  189 (321)
Q Consensus       143 SkDtW~q~l~F~~~v~~dls~YDe~gAWP~LIDEFVE~~r~~~gs~~  189 (321)
                      |||||+|||+|+++|++||++|||+||||+||||||||+|++...++
T Consensus       156 skDtW~~~l~F~~~i~~dls~YDe~gAWP~liDeFVEw~ke~~~~~~  202 (221)
T 4gba_A          156 SRDTWNMFLNFTQVIGPDLSNYSEDEAWPSLFDTFVEWEMERRKREG  202 (221)
T ss_dssp             CHHHHHHHHHHHHHSCSSCTTCCTTSCCCHHHHHHHHHHHHHHHCC-
T ss_pred             CHHHHHHHHHHHHHhcccccCCCCCCCchHHHHHHHHHHHHHhhhhh
Confidence            99999999999999999999999999999999999999999887653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	321
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	84.6

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=84.60  E-value=0.084  Score=32.41  Aligned_cols=16  Identities=56%  Similarity=1.186  Sum_probs=13.9

Q ss_pred             CCcchhhhhcccccccc
Q 020816          288 SPCAVEGCLSKGFVGLF  304 (321)
Q Consensus       288 s~~~~e~~ls~gf~~~~  304 (321)
                      -||..||| +|||..|.
T Consensus         3 fpc~~egc-~kgf~tlh   18 (30)
T d1tf3a2           3 FPCKEEGC-EKGFTSLH   18 (30)
T ss_dssp             EECCCSSC-CCEESSTT
T ss_pred             cCcccccc-cccchhhh
Confidence            38999999 79998875