Citrus Sinensis ID: 020854
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 320 | 2.2.26 [Sep-21-2011] | |||||||
| Q8L9C4 | 318 | Very-long-chain 3-oxoacyl | yes | no | 0.993 | 1.0 | 0.659 | 1e-129 | |
| Q9FYL6 | 312 | Very-long-chain 3-oxoacyl | no | no | 0.928 | 0.951 | 0.526 | 2e-87 | |
| Q6P7R8 | 312 | Estradiol 17-beta-dehydro | yes | no | 0.818 | 0.839 | 0.418 | 5e-54 | |
| O57314 | 312 | Estradiol 17-beta-dehydro | N/A | no | 0.821 | 0.842 | 0.412 | 2e-52 | |
| A8N6B4 | 339 | Very-long-chain 3-oxoacyl | N/A | no | 0.962 | 0.908 | 0.354 | 2e-52 | |
| O70503 | 312 | Estradiol 17-beta-dehydro | yes | no | 0.796 | 0.817 | 0.412 | 4e-52 | |
| Q8AVY8 | 318 | Estradiol 17-beta-dehydro | N/A | no | 0.896 | 0.902 | 0.388 | 1e-51 | |
| Q5XG41 | 318 | Estradiol 17-beta-dehydro | N/A | no | 0.8 | 0.805 | 0.399 | 4e-51 | |
| Q28IU1 | 320 | Estradiol 17-beta-dehydro | yes | no | 0.896 | 0.896 | 0.385 | 6e-51 | |
| Q53GQ0 | 312 | Estradiol 17-beta-dehydro | yes | no | 0.734 | 0.753 | 0.409 | 1e-50 |
| >sp|Q8L9C4|KCR1_ARATH Very-long-chain 3-oxoacyl-CoA reductase 1 OS=Arabidopsis thaliana GN=KCR1 PE=1 SV=1 | Back alignment and function desciption |
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Score = 460 bits (1184), Expect = e-129, Method: Compositional matrix adjust.
Identities = 211/320 (65%), Positives = 267/320 (83%), Gaps = 2/320 (0%)
Query: 1 MESCFLNTLKTQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGSWALVTG 60
ME C K+QP WLL LF +GS+S+ + F +L Y+ FLRP+KNLR+YGSWA++TG
Sbjct: 1 MEIC--TYFKSQPTWLLILFVLGSISIFKFIFTLLRSFYIYFLRPSKNLRRYGSWAIITG 58
Query: 61 PTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEG 120
PTDGIGK+FAFQLA+ GLNL+LV RNPDKLKDVSDSI++KY++TQI +VV+DFSGD+DEG
Sbjct: 59 PTDGIGKAFAFQLAQKGLNLILVARNPDKLKDVSDSIRSKYSQTQILTVVMDFSGDIDEG 118
Query: 121 VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGM 180
V+RIKE+IEGLDVG+LINN G+SYPYA++FHEVD+ L+ NLIK+NVEGTTKVTQAVLP M
Sbjct: 119 VKRIKESIEGLDVGILINNAGMSYPYAKYFHEVDEELINNLIKINVEGTTKVTQAVLPNM 178
Query: 181 LKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLY 240
LKRKKGAI+N+GSGAA +IPS P YSVYA K Y+DQF++ L+VEY+KSGIDVQCQVPLY
Sbjct: 179 LKRKKGAIINMGSGAAALIPSYPFYSVYAGAKTYVDQFTKCLHVEYKKSGIDVQCQVPLY 238
Query: 241 VATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVLSILPEKLIDAGR 300
VATKM I+R+SF V S + YA+AA+R++GYE CTPYWPH+ + V+S LPE + ++
Sbjct: 239 VATKMTKIRRASFLVASPEGYAKAALRFVGYEAQCTPYWPHALMGAVVSALPESVFESFN 298
Query: 301 LQFSIGIRKRGQLKDARKKE 320
++ + IRK+G KD+ KKE
Sbjct: 299 IKRCLQIRKKGLQKDSMKKE 318
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Beta-ketoacyl-coenzyme A reductase required for the elongation of fatty acids precursors of sphingolipids, triacylglycerols, cuticular waxes and suberin. Responsible for the first reduction step in very long-chain fatty acids (VLCFAs) synthesis. Decreased expression of KCR1 (RNAi) leads to plants with fused vegetative and reproductive organs, and abnormal trichome, epidermal cell and root morphology. Cannot be complemented by KCR2. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 3EC: 3EC: 0 |
| >sp|Q9FYL6|KCR2_ARATH Very-long-chain 3-oxoacyl-CoA reductase-like protein At1g24470 OS=Arabidopsis thaliana GN=KCR2 PE=2 SV=1 | Back alignment and function description |
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Score = 323 bits (827), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 161/306 (52%), Positives = 224/306 (73%), Gaps = 9/306 (2%)
Query: 10 KTQPLWLLALFTIGSLSVLRLAFV-ILNWVYVNFLRPAKNLRKYGSWALVTGPTDGIGKS 68
++QP +L + IG L +LR+ F+ +L W FL K L++YGSWA+VTG T+GIG++
Sbjct: 8 ESQPWYLHFVCFIGFLFLLRVLFIPLLKWFTTRFLLTPKRLKRYGSWAMVTGATEGIGRA 67
Query: 69 FAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128
FA +LAK GLNL+LV RN KL+ VSD Q ++ +IK + DFS + G I+E I
Sbjct: 68 FAHELAKHGLNLILVSRNLSKLESVSDDFQQEFPHIKIKIIPFDFSSE--GGYGAIEEGI 125
Query: 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAI 188
+GL+VG+LINNVGI+YP A FFHEVDQ+ +++VN+E TT VT++++ ML R++GAI
Sbjct: 126 KGLEVGILINNVGITYPRAMFFHEVDQLTWTKILRVNLEATTWVTRSLIGPMLHRRRGAI 185
Query: 189 VNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKM--- 245
VNI SGAA+V+PS PLY++YAATKAY+D SRSL+VEY++ GIDVQCQVPLYV+T+M
Sbjct: 186 VNISSGAAVVVPSHPLYAIYAATKAYVDALSRSLHVEYKQFGIDVQCQVPLYVSTRMVSE 245
Query: 246 -ASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVLSILPEKLIDAGRLQFS 304
A+I + S FVPS +VYA+AA+ IG C+P+W HS W ++ ++P+ L+D RL S
Sbjct: 246 VAAIDKPSLFVPSPEVYAKAAVAQIGIGSRCSPFWAHSLQWFLVGLVPDNLVDTWRL--S 303
Query: 305 IGIRKR 310
IG+R+R
Sbjct: 304 IGLRRR 309
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Probable reductase, but unlike KCR1, has no beta-ketoacyl-coenzyme A reductase activity. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q6P7R8|DHB12_RAT Estradiol 17-beta-dehydrogenase 12 OS=Rattus norvegicus GN=Hsd17b12 PE=2 SV=1 | Back alignment and function description |
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Score = 211 bits (537), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 113/270 (41%), Positives = 179/270 (66%), Gaps = 8/270 (2%)
Query: 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVV 110
+ G WA+VTG TDGIGKS+A +LAK G+ +VL+ R+ DKLK+VS++I+ K+ + +++
Sbjct: 48 RLGEWAVVTGGTDGIGKSYAEELAKRGMKIVLISRSQDKLKEVSNNIKEKF-NVETRTIA 106
Query: 111 VDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQV--LLKNLIKVNVEG 168
VDFS LD+ ++IK + GL++GVL+NNVG+SY Y +F E+ + +K LI +NV
Sbjct: 107 VDFS--LDDIYDKIKTGLSGLEIGVLVNNVGMSYEYPEYFLEIPDLDNTIKKLININVLS 164
Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
KVT+ VLPGM++R KG I+NI S + ++ PL +VY+ATKA++D FS+ L+ EY+
Sbjct: 165 ICKVTRLVLPGMVERSKGVILNISSASGML--PVPLLTVYSATKAFVDFFSQCLHEEYKS 222
Query: 229 SGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVL 288
GI VQ +P +VATK+A I++ + PS + + ++A++ +G + T Y H+ + +
Sbjct: 223 KGIFVQSVLPFFVATKLAKIRKPTLDKPSAETFVKSAIKTVGLQTRTTGYVIHAIMGSIN 282
Query: 289 SILPEKLIDAGRLQFSIGIRKRGQLKDARK 318
SILP + + F+ +R R LK +K
Sbjct: 283 SILPRWIYFKTIMGFNKSLRNR-YLKKTKK 311
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Catalyzes the transformation of estrone (E1) into estradiol (E2), suggesting a central role in estrogen formation. Its strong expression in ovary and mammary gland suggest that it may constitute the major enzyme responsible for the conversion of E1 to E2 in females. Also has 3-ketoacyl-CoA reductase activity, reducing both long chain 3-ketoacyl-CoAs and long chain fatty acyl-CoAs, suggesting a role in long fatty acid elongation. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|O57314|DHB12_ANAPL Estradiol 17-beta-dehydrogenase 12 OS=Anas platyrhynchos GN=HSD17B12 PE=2 SV=1 | Back alignment and function description |
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Score = 206 bits (524), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 111/269 (41%), Positives = 170/269 (63%), Gaps = 6/269 (2%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G+WA+VTG TDGIGK++A +LAK G+ + L+ R+ +KL V+ I +Y + K +V D
Sbjct: 48 GAWAVVTGATDGIGKAYAKELAKRGMKVALISRSKEKLDQVAGEITEQYG-VETKVIVAD 106
Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQV--LLKNLIKVNVEGTT 170
F G+ ++ +RI+ +EGL++GVL+NNVGISY Y +F +V + + +I +N+
Sbjct: 107 F-GEREDIYDRIRAGLEGLEIGVLVNNVGISYSYPEYFIDVPDLDKTIDKMININIMSVC 165
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
K+T+ VLPGML+R KG I+NI S A + PL ++Y+A+KA++D FSR L+ EY+ G
Sbjct: 166 KMTRLVLPGMLERSKGVILNISSAAGMY--PTPLLTLYSASKAFVDYFSRGLHAEYKSKG 223
Query: 231 IDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVLSI 290
I VQ +P YVATKM+ I + SF P+ + Y RAA+ +G + PH+F+ V SI
Sbjct: 224 IIVQSVMPYYVATKMSKISKPSFDKPTPETYVRAAIGTVGLQSQTNGCLPHAFMGWVFSI 283
Query: 291 LPEKLIDAGRLQFSIGIRKRGQLKDARKK 319
LP + ++ + IR R K ++K
Sbjct: 284 LPTSTVMNLLMKTNKQIRARFLKKKMKEK 312
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Catalyzes the transformation of estrone (E1) into estradiol (E2), suggesting a central role in estrogen formation. Anas platyrhynchos (taxid: 8839) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 6 EC: 2 |
| >sp|A8N6B4|MKAR_COPC7 Very-long-chain 3-oxoacyl-CoA reductase OS=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=CC1G_02019 PE=3 SV=1 | Back alignment and function description |
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Score = 206 bits (524), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/327 (35%), Positives = 185/327 (56%), Gaps = 19/327 (5%)
Query: 9 LKTQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGS----WALVTGPTDG 64
++ QP W L +GS + LR+ + L+ V F+ P +L+++G+ WA+VTG TDG
Sbjct: 15 IREQPCWTTFLLALGSFNALRIIYQTLSVVLQTFVLPGTSLKRFGAKKGAWAVVTGATDG 74
Query: 65 IGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERI 124
IGK FA QL K G N++LV RNP L + I+ KY K Q + +DF+ +E +
Sbjct: 75 IGKEFAMQLGKAGFNVLLVARNPATLAATAGEIEQKY-KVQTGTFSIDFAAATEEKYTAL 133
Query: 125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK 184
E + GLDVGVL+NNVG S+ + + + +++++++NV T +VT A+LPGM+K K
Sbjct: 134 GEVLTGLDVGVLVNNVGKSHNMPAYLVDTPRDEMRDIVEINVNATLRVTYAILPGMVKNK 193
Query: 185 KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATK 244
+G I+NIGS A IPS P+ + Y+ TKA++ FS +L E +K GI V+ +V +K
Sbjct: 194 RGLILNIGSFAG-AIPS-PMLATYSGTKAFLSTFSSALGEEVKKDGIIVENVNTYFVVSK 251
Query: 245 MASIKRSSFFVPSTDVYARAAMRWIGYE---------PCCTPYWPHSFIWGVLSI--LPE 293
++ I++SS +P+ Y R+ + +G TPYW H+ + +++ +P
Sbjct: 252 LSKIRKSSLLIPTPAPYVRSVLSKVGLACGAAFSGRPNTSTPYWSHALLDYAMTLVGIPS 311
Query: 294 KLIDAGRLQFSIGIRKRGQLKDARKKE 320
I I IR+R K R+ +
Sbjct: 312 LFIRYTH-NLHIDIRRRALRKLEREAK 337
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Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3-ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids. Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) (taxid: 240176) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|O70503|DHB12_MOUSE Estradiol 17-beta-dehydrogenase 12 OS=Mus musculus GN=Hsd17b12 PE=2 SV=1 | Back alignment and function description |
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Score = 205 bits (521), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 108/262 (41%), Positives = 172/262 (65%), Gaps = 7/262 (2%)
Query: 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVV 110
+ G WA+VTG TDGIGK++A +LAK G+ +VL+ R+ DKL VS++I+ K+ + +++
Sbjct: 48 RLGEWAVVTGGTDGIGKAYAEELAKRGMKIVLISRSQDKLNQVSNNIKEKF-NVETRTIA 106
Query: 111 VDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQV--LLKNLIKVNVEG 168
VDFS LD+ ++IK + GL++GVL+NNVG+SY Y +F E+ + +K LI +NV
Sbjct: 107 VDFS--LDDIYDKIKTGLSGLEIGVLVNNVGMSYEYPEYFLEIPDLDNTIKKLININVLS 164
Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
KVT+ VLPGM++R KG I+NI S + ++ PL ++Y+ATKA++D FS+ L+ EY+
Sbjct: 165 VCKVTRLVLPGMVERSKGVILNISSASGML--PVPLLTIYSATKAFVDFFSQCLHEEYKS 222
Query: 229 SGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVL 288
GI VQ +P VATK+A I++ + PS + + ++A++ +G + T Y HS + +
Sbjct: 223 KGIFVQSVMPYLVATKLAKIQKPTLDKPSAETFVKSAIKTVGLQTRTTGYVIHSLMGSIN 282
Query: 289 SILPEKLIDAGRLQFSIGIRKR 310
SI+P + + FS +R R
Sbjct: 283 SIMPRWMYFKIIMGFSKSLRNR 304
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Catalyzes the transformation of estrone (E1) into estradiol (E2), suggesting a central role in estrogen formation. Its strong expression in ovary and mammary gland suggest that it may constitute the major enzyme responsible for the conversion of E1 to E2 in females. Also has 3-ketoacyl-CoA reductase activity, reducing both long chain 3-ketoacyl-CoAs and long chain fatty acyl-CoAs, suggesting a role in long fatty acid elongation. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|Q8AVY8|DH12B_XENLA Estradiol 17-beta-dehydrogenase 12-B OS=Xenopus laevis GN=hsd17b12-b PE=2 SV=1 | Back alignment and function description |
|---|
Score = 203 bits (517), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 115/296 (38%), Positives = 181/296 (61%), Gaps = 9/296 (3%)
Query: 28 LRLAFVILNWVYVNFLRPAKNLR-KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN 86
LR A+ +LN V L + G WA+VTG TDGIGK++A +LA+ G+N+VL+ R+
Sbjct: 28 LRAAWCLLNGARVWVLGSGAQVGPTIGKWAVVTGATDGIGKAYAEELARRGMNIVLISRS 87
Query: 87 PDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPY 146
P+KL++ + I+ K+ K + K + DF G E ERI+ + L++GVL+NNVGISY Y
Sbjct: 88 PEKLEEAAIHIKQKF-KVETKIIAADF-GKPTEIYERIEAGLRDLEIGVLVNNVGISYEY 145
Query: 147 ARFFHEVDQV--LLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL 204
+F E+ + L +I +N+ ++T+ VLPGML R KG ++NI S + + PL
Sbjct: 146 PEYFLEIPDLENTLDKMININIMSVCQMTRLVLPGMLGRGKGVVLNISSASGMY--PVPL 203
Query: 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARA 264
+VY+ATKA++D FSR L+ EYR G+ VQ +P +VATK+A I++ ++ PS + Y R+
Sbjct: 204 LTVYSATKAFVDFFSRGLHAEYRSKGVTVQSVLPFFVATKLAKIRKPTWDKPSPETYVRS 263
Query: 265 AMRWIGYEPCCTPYWPHSFI-WGVLSILPEKLIDAGRLQFSIGIRKRGQLKDARKK 319
A+ +G + Y PH+ W S++P + ++ + G+R R LK A++
Sbjct: 264 ALNTVGLQTQTNGYLPHAITGWISTSLVPVSAAISMGMKMNKGLRAR-FLKKAKQN 318
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Catalyzes the transformation of estrone (E1) into estradiol (E2), suggesting a central role in estrogen formation. Xenopus laevis (taxid: 8355) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 6 EC: 2 |
| >sp|Q5XG41|DH12A_XENLA Estradiol 17-beta-dehydrogenase 12-A OS=Xenopus laevis GN=hsd17b12-a PE=2 SV=1 | Back alignment and function description |
|---|
Score = 202 bits (513), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 105/263 (39%), Positives = 168/263 (63%), Gaps = 7/263 (2%)
Query: 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVV 110
+ G WA+VTG TDGIGK++A +LA+ G+++VL+ R+P+KL + + I+ + K + K +
Sbjct: 52 RIGKWAVVTGATDGIGKAYAEELARRGMSIVLISRSPEKLDEAAKHIKETF-KVETKIIA 110
Query: 111 VDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQV--LLKNLIKVNVEG 168
DF G E ERI+ + L++GVL+NNVG+SY Y +F E+ + L +I +N+
Sbjct: 111 ADF-GKPTEIYERIEAGLRDLEIGVLVNNVGVSYEYPEYFLEIPDLENTLDKMININIMS 169
Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
++T+ VLPGML R KG I+NI S + + PL +VY+ATKA++D FSR L+ EYR
Sbjct: 170 VCQMTRLVLPGMLGRGKGVILNISSASGMY--PVPLLTVYSATKAFVDFFSRGLHAEYRN 227
Query: 229 SGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFI-WGV 287
GI+VQ +P YVATK+A I++ ++ PS + Y R+A+ +G + Y PH+ + W
Sbjct: 228 KGINVQSVLPFYVATKLAKIRKPTWDKPSPETYVRSAVNTVGLQTQTNGYLPHAIMGWIS 287
Query: 288 LSILPEKLIDAGRLQFSIGIRKR 310
S++P + + ++ + G+R R
Sbjct: 288 TSLVPVSVAISMGMKMNKGLRSR 310
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Catalyzes the transformation of estrone (E1) into estradiol (E2), suggesting a central role in estrogen formation. Xenopus laevis (taxid: 8355) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 6 EC: 2 |
| >sp|Q28IU1|DHB12_XENTR Estradiol 17-beta-dehydrogenase 12 OS=Xenopus tropicalis GN=hsd17b12 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 201 bits (511), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 114/296 (38%), Positives = 183/296 (61%), Gaps = 9/296 (3%)
Query: 28 LRLAFVILNWVYVNFLRPAKNLR-KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN 86
LR A+ +L+ V L + + G WA+VTG TDGIGK++A +LAK G+N+VL+ R+
Sbjct: 30 LRAAWCLLDGARVWVLGSGAQVGPRIGKWAVVTGATDGIGKAYAEELAKRGMNIVLISRS 89
Query: 87 PDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPY 146
P+KL++V+ I+ K+ K + K + DF G E RI+ + L++GVL+NNVG+SY +
Sbjct: 90 PEKLEEVAKQIKEKF-KVETKIIAADF-GKPTEIYGRIESGLRDLEIGVLVNNVGVSYEH 147
Query: 147 ARFFHEVDQV--LLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL 204
+F E+ + L +I +N+ ++T+ VLPGML R +G I+NI S + + PL
Sbjct: 148 PEYFLEIPDLENTLDKMININITSVCQMTRLVLPGMLGRGRGVILNISSASGMY--PVPL 205
Query: 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARA 264
+VY+ATKA++D FSR L EYR G+ VQ +P YVATK+A I++ ++ PS + Y ++
Sbjct: 206 LTVYSATKAFVDFFSRGLQAEYRSKGVTVQSVLPFYVATKLAKIRKPTWDKPSPETYVQS 265
Query: 265 AMRWIGYEPCCTPYWPHSFI-WGVLSILPEKLIDAGRLQFSIGIRKRGQLKDARKK 319
A+ +G + Y PH+ + W S++P + ++ + G+R R LK A++K
Sbjct: 266 ALNTVGLQTQTNGYLPHAIMGWISTSLVPVSTAISLGMKMNKGLRAR-FLKRAKQK 320
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Catalyzes the transformation of estrone (E1) into estradiol (E2), suggesting a central role in estrogen formation. Xenopus tropicalis (taxid: 8364) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 6 EC: 2 |
| >sp|Q53GQ0|DHB12_HUMAN Estradiol 17-beta-dehydrogenase 12 OS=Homo sapiens GN=HSD17B12 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 200 bits (508), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/242 (40%), Positives = 164/242 (67%), Gaps = 7/242 (2%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G WA+VTG TDGIGKS+A +LAK G+ +VL+ R+ DKL VS I+ K+ K + +++ VD
Sbjct: 50 GEWAVVTGSTDGIGKSYAEELAKHGMKVVLISRSKDKLDQVSSEIKEKF-KVETRTIAVD 108
Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQV--LLKNLIKVNVEGTT 170
F+ + + ++IK + GL++G+L+NNVG+SY Y +F +V + ++K +I +N+
Sbjct: 109 FASE--DIYDKIKTGLAGLEIGILVNNVGMSYEYPEYFLDVPDLDNVIKKMININILSVC 166
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
K+TQ VLPGM++R KGAI+NI SG+ ++ PL ++Y+ATK ++D FS+ L+ EYR G
Sbjct: 167 KMTQLVLPGMVERSKGAILNISSGSGML--PVPLLTIYSATKTFVDFFSQCLHEEYRSKG 224
Query: 231 IDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVLSI 290
+ VQ +P +VATK+A I++ + PS + + ++A++ +G + Y H+ + ++S
Sbjct: 225 VFVQSVLPYFVATKLAKIRKPTLDKPSPETFVKSAIKTVGLQSRTNGYLIHALMGSIISN 284
Query: 291 LP 292
LP
Sbjct: 285 LP 286
|
Catalyzes the transformation of estrone (E1) into estradiol (E2), suggesting a central role in estrogen formation. Its strong expression in ovary and mammary gland suggest that it may constitute the major enzyme responsible for the conversion of E1 to E2 in women. Also has 3-ketoacyl-CoA reductase activity, reducing both long chain 3-ketoacyl-CoAs and long chain fatty acyl-CoAs, suggesting a role in long fatty acid elongation. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 320 | ||||||
| 62956018 | 320 | 3-ketoacyl-CoA reductase 1 [Gossypium hi | 1.0 | 1.0 | 0.821 | 1e-155 | |
| 255547948 | 320 | steroid dehydrogenase, putative [Ricinus | 1.0 | 1.0 | 0.828 | 1e-151 | |
| 224107711 | 320 | predicted protein [Populus trichocarpa] | 1.0 | 1.0 | 0.793 | 1e-150 | |
| 357463161 | 320 | Short-chain dehydrogenase/reductase [Med | 1.0 | 1.0 | 0.775 | 1e-148 | |
| 388519619 | 320 | unknown [Medicago truncatula] | 1.0 | 1.0 | 0.775 | 1e-148 | |
| 225424552 | 320 | PREDICTED: estradiol 17-beta-dehydrogena | 1.0 | 1.0 | 0.796 | 1e-147 | |
| 449450411 | 320 | PREDICTED: very-long-chain 3-oxoacyl-CoA | 1.0 | 1.0 | 0.787 | 1e-145 | |
| 359806497 | 320 | uncharacterized protein LOC100817128 [Gl | 1.0 | 1.0 | 0.778 | 1e-141 | |
| 356540201 | 320 | PREDICTED: estradiol 17-beta-dehydrogena | 1.0 | 1.0 | 0.771 | 1e-140 | |
| 224100105 | 320 | predicted protein [Populus trichocarpa] | 0.987 | 0.987 | 0.787 | 1e-138 |
| >gi|62956018|gb|AAY23354.1| 3-ketoacyl-CoA reductase 1 [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 263/320 (82%), Positives = 293/320 (91%)
Query: 1 MESCFLNTLKTQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGSWALVTG 60
ME+CF +TLK QP W++ LFT+GSLS+L+ +FV L WV++NFLRP KNL+KYGSW LVTG
Sbjct: 1 MEACFFDTLKAQPFWVIFLFTLGSLSLLKFSFVFLKWVWINFLRPGKNLKKYGSWGLVTG 60
Query: 61 PTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEG 120
PTDGIGK FAFQLA+ GLNLVLVGRNPDKLKDVSDSI AKYAK QI++VVVDF+GDLDEG
Sbjct: 61 PTDGIGKGFAFQLARKGLNLVLVGRNPDKLKDVSDSILAKYAKIQIRTVVVDFTGDLDEG 120
Query: 121 VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGM 180
V++IKE IEGLDVGVLINNVGISYPYAR+FHEVD+ LL NLIKVNVEGTTKVTQAVLPGM
Sbjct: 121 VKKIKETIEGLDVGVLINNVGISYPYARYFHEVDEELLVNLIKVNVEGTTKVTQAVLPGM 180
Query: 181 LKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLY 240
+KRKKGAIVNIGSGAAIVIPSDPLY+VYAATKAYIDQFSR LYVEY+ SGIDVQCQVPLY
Sbjct: 181 VKRKKGAIVNIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKNSGIDVQCQVPLY 240
Query: 241 VATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVLSILPEKLIDAGR 300
VATKMASIKRSSFFVPSTD YARAAMRWIGYEP CTPYWPHS +WG+ LPE ++DA R
Sbjct: 241 VATKMASIKRSSFFVPSTDGYARAAMRWIGYEPRCTPYWPHSILWGLAYSLPESVVDAWR 300
Query: 301 LQFSIGIRKRGQLKDARKKE 320
L+F +GIRKRGQ+KD+RKKE
Sbjct: 301 LRFCLGIRKRGQMKDSRKKE 320
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255547948|ref|XP_002515031.1| steroid dehydrogenase, putative [Ricinus communis] gi|223546082|gb|EEF47585.1| steroid dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 539 bits (1389), Expect = e-151, Method: Compositional matrix adjust.
Identities = 265/320 (82%), Positives = 294/320 (91%)
Query: 1 MESCFLNTLKTQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGSWALVTG 60
ME CF++ LK+QPLW L LF++GSLS+LR F ILNWVYVNFLRPAKNL+KYGSWALVTG
Sbjct: 1 MELCFVDKLKSQPLWFLVLFSLGSLSLLRCFFTILNWVYVNFLRPAKNLKKYGSWALVTG 60
Query: 61 PTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEG 120
PTDGIGK FAFQLA+ GLNLVLV RNPDKLKDVSDSI +KY K QIK+VVVDFSGD+DEG
Sbjct: 61 PTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSILSKYGKVQIKTVVVDFSGDIDEG 120
Query: 121 VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGM 180
V+RIK+ +EGLDVGVLINNVG+SYPYARFFHEVD+ LLKNLIKVNVEGTTKVT AVLPGM
Sbjct: 121 VKRIKDTVEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTHAVLPGM 180
Query: 181 LKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLY 240
LKRKKGAI+NIGSGAAIVIPSDPLY+VYAATKAYIDQFSR LYVEY+KSGIDVQCQVPLY
Sbjct: 181 LKRKKGAIINIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLY 240
Query: 241 VATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVLSILPEKLIDAGR 300
VATKMASI+RSSFFVPSTD YARA +RW+GYEP CTPYWPHS IWG++SI+PE +DA R
Sbjct: 241 VATKMASIRRSSFFVPSTDDYARAGLRWVGYEPRCTPYWPHSLIWGLISIVPEFAVDAWR 300
Query: 301 LQFSIGIRKRGQLKDARKKE 320
+F++GIRKRGQ KDARKKE
Sbjct: 301 YKFNLGIRKRGQQKDARKKE 320
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224107711|ref|XP_002314573.1| predicted protein [Populus trichocarpa] gi|222863613|gb|EEF00744.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 254/320 (79%), Positives = 288/320 (90%)
Query: 1 MESCFLNTLKTQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGSWALVTG 60
M CF++ LK+QP WLL LFT+GSLS L+ F L WVYV+FLRPAKNL+KYGSWALVTG
Sbjct: 1 MSLCFVDELKSQPSWLLVLFTLGSLSFLKFLFASLKWVYVSFLRPAKNLKKYGSWALVTG 60
Query: 61 PTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEG 120
PTDGIGK FAFQLA+ GLNL+LVGRNPDKLKDVS SIQ+KY+ QIK+VVVDFSGD+DEG
Sbjct: 61 PTDGIGKGFAFQLARKGLNLILVGRNPDKLKDVSTSIQSKYSNVQIKNVVVDFSGDIDEG 120
Query: 121 VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGM 180
V++IKE +EGLDVG+LINNVG+SYPYARFFHEVD+ LLK+LI+VNVEGTTKVTQAVLPGM
Sbjct: 121 VQKIKETVEGLDVGILINNVGVSYPYARFFHEVDEELLKHLIRVNVEGTTKVTQAVLPGM 180
Query: 181 LKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLY 240
LKRKKGAIVNIGSGAAIVIPSDPLY+VYAATKAYIDQFSR LYVEY+KSGIDVQCQVPLY
Sbjct: 181 LKRKKGAIVNIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLY 240
Query: 241 VATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVLSILPEKLIDAGR 300
VATKMASIKRSSF+VPS+D YARA +R IGYEP CTPYWPHS +WG++ +LPE +D+ R
Sbjct: 241 VATKMASIKRSSFWVPSSDSYARAGLRAIGYEPRCTPYWPHSLLWGLIQLLPESAVDSWR 300
Query: 301 LQFSIGIRKRGQLKDARKKE 320
L F + IRKRGQLKD+RK E
Sbjct: 301 LGFCLRIRKRGQLKDSRKNE 320
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357463161|ref|XP_003601862.1| Short-chain dehydrogenase/reductase [Medicago truncatula] gi|355490910|gb|AES72113.1| Short-chain dehydrogenase/reductase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 529 bits (1363), Expect = e-148, Method: Compositional matrix adjust.
Identities = 248/320 (77%), Positives = 285/320 (89%)
Query: 1 MESCFLNTLKTQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGSWALVTG 60
M+ C ++ LKTQP W L LF++G ++LR ++LNW YVNFLR KNL+ YGSWALVTG
Sbjct: 1 MDCCIISKLKTQPFWFLILFSLGLFTILRFTLLLLNWFYVNFLRQPKNLKNYGSWALVTG 60
Query: 61 PTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEG 120
PTDGIGKSFAF+LA+ GLNL+LVGRNP+KLKDVSDSI+AK+ KT++K+VVVDF+GDLD+G
Sbjct: 61 PTDGIGKSFAFELARKGLNLILVGRNPEKLKDVSDSIKAKFGKTEVKTVVVDFTGDLDDG 120
Query: 121 VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGM 180
V+RI E I+GLDVGVLINNVGISYPYARFFHEVDQ LLKNLIKVNV GTTKVTQAVLPGM
Sbjct: 121 VKRIVETIDGLDVGVLINNVGISYPYARFFHEVDQELLKNLIKVNVVGTTKVTQAVLPGM 180
Query: 181 LKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLY 240
LKRKKGAIVNIGSGAAIVIPSDPLY+VYAATKAYIDQFSR LYVEY+KSGIDVQCQVPLY
Sbjct: 181 LKRKKGAIVNIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLY 240
Query: 241 VATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVLSILPEKLIDAGR 300
VATKMASI+RSSFFVPSTD YA+A ++WIGYEP CTPYWPH+ +W V LPE ++D R
Sbjct: 241 VATKMASIRRSSFFVPSTDGYAKAGVKWIGYEPRCTPYWPHTLLWAVARSLPESIVDTWR 300
Query: 301 LQFSIGIRKRGQLKDARKKE 320
L F +GIRKRGQLKD++K+E
Sbjct: 301 LGFCMGIRKRGQLKDSKKQE 320
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388519619|gb|AFK47871.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 529 bits (1362), Expect = e-148, Method: Compositional matrix adjust.
Identities = 248/320 (77%), Positives = 285/320 (89%)
Query: 1 MESCFLNTLKTQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGSWALVTG 60
M+ C ++ LKTQP W L LF++G ++LR ++LNW YVNFLR KNL+ YGSWALVTG
Sbjct: 1 MDCCIISKLKTQPYWFLILFSLGLFTILRFTLLLLNWFYVNFLRQPKNLKNYGSWALVTG 60
Query: 61 PTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEG 120
PTDGIGKSFAF+LA+ GLNL+LVGRNP+KLKDVSDSI+AK+ KT++K+VVVDF+GDLD+G
Sbjct: 61 PTDGIGKSFAFELARKGLNLILVGRNPEKLKDVSDSIKAKFGKTEVKTVVVDFTGDLDDG 120
Query: 121 VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGM 180
V+RI E I+GLDVGVLINNVGISYPYARFFHEVDQ LLKNLIKVNV GTTKVTQAVLPGM
Sbjct: 121 VKRIVETIDGLDVGVLINNVGISYPYARFFHEVDQELLKNLIKVNVVGTTKVTQAVLPGM 180
Query: 181 LKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLY 240
LKRKKGAIVNIGSGAAIVIPSDPLY+VYAATKAYIDQFSR LYVEY+KSGIDVQCQVPLY
Sbjct: 181 LKRKKGAIVNIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLY 240
Query: 241 VATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVLSILPEKLIDAGR 300
VATKMASI+RSSFFVPSTD YA+A ++WIGYEP CTPYWPH+ +W V LPE ++D R
Sbjct: 241 VATKMASIRRSSFFVPSTDGYAKAGVKWIGYEPRCTPYWPHTLLWAVARSLPESIVDTWR 300
Query: 301 LQFSIGIRKRGQLKDARKKE 320
L F +GIRKRGQLKD++K+E
Sbjct: 301 LGFCMGIRKRGQLKDSKKQE 320
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225424552|ref|XP_002285316.1| PREDICTED: estradiol 17-beta-dehydrogenase 12 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 255/320 (79%), Positives = 281/320 (87%)
Query: 1 MESCFLNTLKTQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGSWALVTG 60
ME CF+ L+TQPLW++ LF +G LSVL+ ILN VYV FLRP KNL+KYGSWALVT
Sbjct: 1 MELCFMEKLQTQPLWVIVLFAVGCLSVLKSFLAILNGVYVCFLRPGKNLKKYGSWALVTA 60
Query: 61 PTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEG 120
PTDGIGK FAF+LA+ GLNLVLVGRNPDKLKDVSD+IQ+KY KTQIK+VVVDF+GD+ EG
Sbjct: 61 PTDGIGKGFAFELARKGLNLVLVGRNPDKLKDVSDAIQSKYGKTQIKAVVVDFAGDISEG 120
Query: 121 VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGM 180
V +I+EAI GLDVGVLINNVG+SYPYARFFHEVD LLKNLIKVNVEGTTKVTQAVLPGM
Sbjct: 121 VLKIREAILGLDVGVLINNVGVSYPYARFFHEVDDELLKNLIKVNVEGTTKVTQAVLPGM 180
Query: 181 LKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLY 240
LKRKKGAIVNIGSGAAIVIPSDPLY+VYAATKAYIDQFSR LYVEY+ SGIDVQCQVPLY
Sbjct: 181 LKRKKGAIVNIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKNSGIDVQCQVPLY 240
Query: 241 VATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVLSILPEKLIDAGR 300
VATKMASI+RSSF VPS+D YARAAMRWIGYEP CTPYWPH IWG+ LPE ID R
Sbjct: 241 VATKMASIRRSSFLVPSSDGYARAAMRWIGYEPRCTPYWPHVLIWGLACQLPECAIDVWR 300
Query: 301 LQFSIGIRKRGQLKDARKKE 320
L F++ IRKRGQLK +RK+E
Sbjct: 301 LGFNLKIRKRGQLKGSRKQE 320
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449450411|ref|XP_004142956.1| PREDICTED: very-long-chain 3-oxoacyl-CoA reductase 1-like [Cucumis sativus] gi|449527051|ref|XP_004170526.1| PREDICTED: very-long-chain 3-oxoacyl-CoA reductase 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 519 bits (1337), Expect = e-145, Method: Compositional matrix adjust.
Identities = 252/320 (78%), Positives = 284/320 (88%)
Query: 1 MESCFLNTLKTQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGSWALVTG 60
M+ + LK+QP+W+ L +GSLS L+ +ILNW+YVNFLRP+KNL+KYGSWALVTG
Sbjct: 1 MQLSCVEHLKSQPIWVFFLLALGSLSALKFILIILNWIYVNFLRPSKNLKKYGSWALVTG 60
Query: 61 PTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEG 120
PTDGIGKSFAFQLA+ GLNLVLVGRNP+KLKDVSDSI AKY QIKSVVVDFSGDL EG
Sbjct: 61 PTDGIGKSFAFQLARKGLNLVLVGRNPEKLKDVSDSIVAKYGSIQIKSVVVDFSGDLSEG 120
Query: 121 VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGM 180
++RI EAIEGLDVGVLINNVG+SYPY RFFHEVD+ LL NLIKVNVEGTTKVT AVLPGM
Sbjct: 121 IKRITEAIEGLDVGVLINNVGVSYPYGRFFHEVDEELLNNLIKVNVEGTTKVTHAVLPGM 180
Query: 181 LKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLY 240
LKRK+GAIVNIGSGAAIVIPSDPLY+VYAATK+YIDQFSR LYVEY+KSGIDVQCQVPLY
Sbjct: 181 LKRKRGAIVNIGSGAAIVIPSDPLYTVYAATKSYIDQFSRCLYVEYKKSGIDVQCQVPLY 240
Query: 241 VATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVLSILPEKLIDAGR 300
VATKMASI+RSSFFVPST+ YA A +RWIGYEP CTPYWPH +WG++S+LPE ++D R
Sbjct: 241 VATKMASIRRSSFFVPSTNGYAAAGLRWIGYEPRCTPYWPHQLLWGLVSLLPESVVDGWR 300
Query: 301 LQFSIGIRKRGQLKDARKKE 320
L F +GIRKRGQLKD+RKKE
Sbjct: 301 LNFCLGIRKRGQLKDSRKKE 320
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359806497|ref|NP_001241510.1| uncharacterized protein LOC100817128 [Glycine max] gi|255647230|gb|ACU24083.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 249/320 (77%), Positives = 286/320 (89%)
Query: 1 MESCFLNTLKTQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGSWALVTG 60
ME C + LKTQPLW LF +G L++L+LAFV+ WVYVNFLRP KNL+KYGSWA+VTG
Sbjct: 1 MECCIIARLKTQPLWFALLFVVGLLTILKLAFVVFRWVYVNFLRPPKNLKKYGSWAVVTG 60
Query: 61 PTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEG 120
PTDGIGKSFAF+LA+ GLNLVLVGRNPDKLKDVSDSI AK+ +T++K+VVVDFSGDLDEG
Sbjct: 61 PTDGIGKSFAFELARKGLNLVLVGRNPDKLKDVSDSIAAKFRRTEVKTVVVDFSGDLDEG 120
Query: 121 VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGM 180
V++I EAIEGL+VGVL+NNVG+SYPYARFFHEVD+ LL NLIKVNV GTTKVTQAVLPGM
Sbjct: 121 VKKISEAIEGLEVGVLVNNVGVSYPYARFFHEVDEGLLNNLIKVNVVGTTKVTQAVLPGM 180
Query: 181 LKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLY 240
L+RKKGAIVNIGSGAAIVIPSDPLY+VYAATKAYIDQFSR LYVEY+KSGIDVQCQ+PLY
Sbjct: 181 LRRKKGAIVNIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQIPLY 240
Query: 241 VATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVLSILPEKLIDAGR 300
VATKMASI++SSFFVPSTD YA+A ++WIGYEP CTPYWPH+ +W V LPE ++DA R
Sbjct: 241 VATKMASIRKSSFFVPSTDGYAKAGVKWIGYEPRCTPYWPHTLLWAVAFSLPEFVVDAWR 300
Query: 301 LQFSIGIRKRGQLKDARKKE 320
L F +GIRKRGQ K++ KKE
Sbjct: 301 LWFCLGIRKRGQRKESMKKE 320
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356540201|ref|XP_003538578.1| PREDICTED: estradiol 17-beta-dehydrogenase 12-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 247/320 (77%), Positives = 287/320 (89%)
Query: 1 MESCFLNTLKTQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGSWALVTG 60
ME C ++ LKTQP+W LF +G L++L+LAFV+L WVYVNFLRP KNL+KYGSWA+VTG
Sbjct: 1 MECCIISRLKTQPIWFALLFIVGLLTILKLAFVVLRWVYVNFLRPPKNLKKYGSWAVVTG 60
Query: 61 PTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEG 120
PTDGIGKSFAF+LA+ GLNLVLVGRNPDKLKDVSDSI A++ KT++K+VVVDF GDLDEG
Sbjct: 61 PTDGIGKSFAFELARKGLNLVLVGRNPDKLKDVSDSIAARFGKTEVKTVVVDFFGDLDEG 120
Query: 121 VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGM 180
V++I EAI+GL+VGVL+NNVG+SYPYARFFHEVD+ LL NLIK+NV GTTKVTQAVLPGM
Sbjct: 121 VKKISEAIQGLEVGVLVNNVGVSYPYARFFHEVDEGLLNNLIKLNVVGTTKVTQAVLPGM 180
Query: 181 LKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLY 240
LKRKKGAIVN+GSGAAIVIPSDPLY+VYAATKAYIDQFSR LYVEY++SGIDVQCQVPLY
Sbjct: 181 LKRKKGAIVNMGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKRSGIDVQCQVPLY 240
Query: 241 VATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVLSILPEKLIDAGR 300
VATKMASI++SSFFVPSTD YA+A ++WIGYEP CTPYWPH+ +W V LPE ++DA R
Sbjct: 241 VATKMASIRKSSFFVPSTDGYAKAGVKWIGYEPRCTPYWPHTLLWAVACSLPEFVVDAWR 300
Query: 301 LQFSIGIRKRGQLKDARKKE 320
L F +GIRKRGQ KD+ KKE
Sbjct: 301 LWFCLGIRKRGQRKDSMKKE 320
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224100105|ref|XP_002311745.1| predicted protein [Populus trichocarpa] gi|222851565|gb|EEE89112.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 249/316 (78%), Positives = 282/316 (89%)
Query: 5 FLNTLKTQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGSWALVTGPTDG 64
F++ LK QP WLL LFT+GSLS+L+ L WVYV+FLRPAKNL+KYGSWALVTGPTDG
Sbjct: 5 FIDQLKDQPFWLLLLFTLGSLSLLKFLSATLKWVYVSFLRPAKNLKKYGSWALVTGPTDG 64
Query: 65 IGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERI 124
IGK FAFQLA+ GLNLVLVGRNPDKLKDVS SIQ++Y+ QIK+VVVDFSGD+DEGV++I
Sbjct: 65 IGKGFAFQLARKGLNLVLVGRNPDKLKDVSRSIQSRYSNVQIKNVVVDFSGDIDEGVQKI 124
Query: 125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK 184
KE IEGLDVGVLINNVG+SYP ARFFHEVD+ LLKNLIKVNVEGTTKVTQAVL GMLK+K
Sbjct: 125 KETIEGLDVGVLINNVGVSYPCARFFHEVDEGLLKNLIKVNVEGTTKVTQAVLHGMLKKK 184
Query: 185 KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATK 244
KGAIVNIGSGAAIVIPSDPLY+VYAATKAYIDQFSR LYVEY+KSGIDVQCQVPLYVATK
Sbjct: 185 KGAIVNIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATK 244
Query: 245 MASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVLSILPEKLIDAGRLQFS 304
MASI+RSSF+VPS+D YARA +R IGYEP CTPYWPHS +WG++ +LPE ++D RL F
Sbjct: 245 MASIRRSSFWVPSSDGYARAGLRAIGYEPRCTPYWPHSLLWGLIQLLPESIVDFWRLSFC 304
Query: 305 IGIRKRGQLKDARKKE 320
+ IRK+G LKD+RK E
Sbjct: 305 LAIRKKGHLKDSRKME 320
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 320 | ||||||
| TAIR|locus:2008630 | 318 | KCR1 "beta-ketoacyl reductase | 0.993 | 1.0 | 0.659 | 1.3e-116 | |
| TAIR|locus:2023996 | 312 | KCR2 "beta-ketoacyl reductase | 0.928 | 0.951 | 0.526 | 3.2e-81 | |
| DICTYBASE|DDB_G0275049 | 307 | DDB_G0275049 "short-chain dehy | 0.896 | 0.934 | 0.406 | 2.9e-55 | |
| RGD|708367 | 312 | Hsd17b12 "hydroxysteroid (17-b | 0.9 | 0.923 | 0.407 | 1.5e-53 | |
| UNIPROTKB|Q6P7R8 | 312 | Hsd17b12 "Estradiol 17-beta-de | 0.9 | 0.923 | 0.407 | 1.5e-53 | |
| MGI|MGI:1926967 | 312 | Hsd17b12 "hydroxysteroid (17-b | 0.818 | 0.839 | 0.414 | 1.2e-51 | |
| UNIPROTKB|E2RJ79 | 312 | HSD17B12 "Uncharacterized prot | 0.809 | 0.830 | 0.420 | 1.5e-51 | |
| FB|FBgn0029975 | 321 | CG1444 [Drosophila melanogaste | 0.95 | 0.947 | 0.373 | 5.1e-51 | |
| UNIPROTKB|Q5E9H7 | 312 | HSD17B12 "Estradiol 17-beta-de | 0.85 | 0.871 | 0.411 | 1.3e-50 | |
| ZFIN|ZDB-GENE-030131-1346 | 311 | hsd17b12b "hydroxysteroid (17- | 0.918 | 0.945 | 0.368 | 1.3e-50 |
| TAIR|locus:2008630 KCR1 "beta-ketoacyl reductase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1149 (409.5 bits), Expect = 1.3e-116, P = 1.3e-116
Identities = 211/320 (65%), Positives = 267/320 (83%)
Query: 1 MESCFLNTLKTQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGSWALVTG 60
ME C K+QP WLL LF +GS+S+ + F +L Y+ FLRP+KNLR+YGSWA++TG
Sbjct: 1 MEIC--TYFKSQPTWLLILFVLGSISIFKFIFTLLRSFYIYFLRPSKNLRRYGSWAIITG 58
Query: 61 PTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEG 120
PTDGIGK+FAFQLA+ GLNL+LV RNPDKLKDVSDSI++KY++TQI +VV+DFSGD+DEG
Sbjct: 59 PTDGIGKAFAFQLAQKGLNLILVARNPDKLKDVSDSIRSKYSQTQILTVVMDFSGDIDEG 118
Query: 121 VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGM 180
V+RIKE+IEGLDVG+LINN G+SYPYA++FHEVD+ L+ NLIK+NVEGTTKVTQAVLP M
Sbjct: 119 VKRIKESIEGLDVGILINNAGMSYPYAKYFHEVDEELINNLIKINVEGTTKVTQAVLPNM 178
Query: 181 LKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLY 240
LKRKKGAI+N+GSGAA +IPS P YSVYA K Y+DQF++ L+VEY+KSGIDVQCQVPLY
Sbjct: 179 LKRKKGAIINMGSGAAALIPSYPFYSVYAGAKTYVDQFTKCLHVEYKKSGIDVQCQVPLY 238
Query: 241 VATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVLSILPEKLIDAGR 300
VATKM I+R+SF V S + YA+AA+R++GYE CTPYWPH+ + V+S LPE + ++
Sbjct: 239 VATKMTKIRRASFLVASPEGYAKAALRFVGYEAQCTPYWPHALMGAVVSALPESVFESFN 298
Query: 301 LQFSIGIRKRGQLKDARKKE 320
++ + IRK+G KD+ KKE
Sbjct: 299 IKRCLQIRKKGLQKDSMKKE 318
|
|
| TAIR|locus:2023996 KCR2 "beta-ketoacyl reductase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 815 (292.0 bits), Expect = 3.2e-81, P = 3.2e-81
Identities = 161/306 (52%), Positives = 224/306 (73%)
Query: 10 KTQPLWLLALFTIGSLSVLRLAFV-ILNWVYVNFLRPAKNLRKYGSWALVTGPTDGIGKS 68
++QP +L + IG L +LR+ F+ +L W FL K L++YGSWA+VTG T+GIG++
Sbjct: 8 ESQPWYLHFVCFIGFLFLLRVLFIPLLKWFTTRFLLTPKRLKRYGSWAMVTGATEGIGRA 67
Query: 69 FAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128
FA +LAK GLNL+LV RN KL+ VSD Q ++ +IK + DFS + G I+E I
Sbjct: 68 FAHELAKHGLNLILVSRNLSKLESVSDDFQQEFPHIKIKIIPFDFSSE--GGYGAIEEGI 125
Query: 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAI 188
+GL+VG+LINNVGI+YP A FFHEVDQ+ +++VN+E TT VT++++ ML R++GAI
Sbjct: 126 KGLEVGILINNVGITYPRAMFFHEVDQLTWTKILRVNLEATTWVTRSLIGPMLHRRRGAI 185
Query: 189 VNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKM--- 245
VNI SGAA+V+PS PLY++YAATKAY+D SRSL+VEY++ GIDVQCQVPLYV+T+M
Sbjct: 186 VNISSGAAVVVPSHPLYAIYAATKAYVDALSRSLHVEYKQFGIDVQCQVPLYVSTRMVSE 245
Query: 246 -ASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVLSILPEKLIDAGRLQFS 304
A+I + S FVPS +VYA+AA+ IG C+P+W HS W ++ ++P+ L+D RL S
Sbjct: 246 VAAIDKPSLFVPSPEVYAKAAVAQIGIGSRCSPFWAHSLQWFLVGLVPDNLVDTWRL--S 303
Query: 305 IGIRKR 310
IG+R+R
Sbjct: 304 IGLRRR 309
|
|
| DICTYBASE|DDB_G0275049 DDB_G0275049 "short-chain dehydrogenase/reductase (SDR) family protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 118/290 (40%), Positives = 180/290 (62%)
Query: 21 TIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNL 80
+IG +LR A + ++Y F+R N+ KYGSW +VTG TDGIGK++ + AK LN+
Sbjct: 13 SIGLGILLRYAARFVLFLYAYFVRSPININKYGSWVVVTGATDGIGKAYCHEFAKKKLNV 72
Query: 81 VLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNV 140
VLV R+ DKLK+V+ I+ K+ K Q K + DF+ D + + + + G+D+GVL+NNV
Sbjct: 73 VLVSRSLDKLKEVASEIENKF-KVQTKVISFDFNTTDDSKYQELFKQLSGIDIGVLVNNV 131
Query: 141 GISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP 200
GISY + + E+ +++LI +NV T +++ +L M+++K+GAI+N+ S + I P
Sbjct: 132 GISYDHPMYLEELQPASIESLINLNVRAATVLSKFILTSMVEKKRGAIINLASVSGIT-P 190
Query: 201 SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDV 260
PL +VY+ TKAYI++FS +L +EY GI VQC P V +KM+ +++SS FVP
Sbjct: 191 I-PLLTVYSGTKAYIEKFSLALNLEYASKGIFVQCVTPGIVCSKMSKVRKSSLFVPQPSS 249
Query: 261 YARAAMRWIGYEPCCTPYWPHSFIWGVLSILPEKLIDAGRLQFSIGIRKR 310
+AR+A+ IGY+ T YW H L LP ++D +G RKR
Sbjct: 250 FARSAIATIGYDRLTTGYWSHEIQAFFLRSLPSFVVDKVMFDMHLGQRKR 299
|
|
| RGD|708367 Hsd17b12 "hydroxysteroid (17-beta) dehydrogenase 12" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
Identities = 125/307 (40%), Positives = 196/307 (63%)
Query: 17 LALFTI-GSLSVLRLAFVILNWVYVN--FLRPAKNLRKYGSWALVTGPTDGIGKSFAFQL 73
+A T+ S S+ R AF + W N F+ P + G WA+VTG TDGIGKS+A +L
Sbjct: 19 IAYLTLRASYSLFR-AFQV--WCVGNQAFVGP-----RLGEWAVVTGGTDGIGKSYAEEL 70
Query: 74 AKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV 133
AK G+ +VL+ R+ DKLK+VS++I+ K+ + +++ VDFS LD+ ++IK + GL++
Sbjct: 71 AKRGMKIVLISRSQDKLKEVSNNIKEKF-NVETRTIAVDFS--LDDIYDKIKTGLSGLEI 127
Query: 134 GVLINNVGISYPYARFFHEVDQV--LLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNI 191
GVL+NNVG+SY Y +F E+ + +K LI +NV KVT+ VLPGM++R KG I+NI
Sbjct: 128 GVLVNNVGMSYEYPEYFLEIPDLDNTIKKLININVLSICKVTRLVLPGMVERSKGVILNI 187
Query: 192 GSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRS 251
S + + +P PL +VY+ATKA++D FS+ L+ EY+ GI VQ +P +VATK+A I++
Sbjct: 188 SSASGM-LPV-PLLTVYSATKAFVDFFSQCLHEEYKSKGIFVQSVLPFFVATKLAKIRKP 245
Query: 252 SFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVLSILPEKLIDAGRLQFSIGIRKRG 311
+ PS + + ++A++ +G + T Y H+ + + SILP + + F+ +R R
Sbjct: 246 TLDKPSAETFVKSAIKTVGLQTRTTGYVIHAIMGSINSILPRWIYFKTIMGFNKSLRNR- 304
Query: 312 QLKDARK 318
LK +K
Sbjct: 305 YLKKTKK 311
|
|
| UNIPROTKB|Q6P7R8 Hsd17b12 "Estradiol 17-beta-dehydrogenase 12" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
Identities = 125/307 (40%), Positives = 196/307 (63%)
Query: 17 LALFTI-GSLSVLRLAFVILNWVYVN--FLRPAKNLRKYGSWALVTGPTDGIGKSFAFQL 73
+A T+ S S+ R AF + W N F+ P + G WA+VTG TDGIGKS+A +L
Sbjct: 19 IAYLTLRASYSLFR-AFQV--WCVGNQAFVGP-----RLGEWAVVTGGTDGIGKSYAEEL 70
Query: 74 AKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV 133
AK G+ +VL+ R+ DKLK+VS++I+ K+ + +++ VDFS LD+ ++IK + GL++
Sbjct: 71 AKRGMKIVLISRSQDKLKEVSNNIKEKF-NVETRTIAVDFS--LDDIYDKIKTGLSGLEI 127
Query: 134 GVLINNVGISYPYARFFHEVDQV--LLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNI 191
GVL+NNVG+SY Y +F E+ + +K LI +NV KVT+ VLPGM++R KG I+NI
Sbjct: 128 GVLVNNVGMSYEYPEYFLEIPDLDNTIKKLININVLSICKVTRLVLPGMVERSKGVILNI 187
Query: 192 GSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRS 251
S + + +P PL +VY+ATKA++D FS+ L+ EY+ GI VQ +P +VATK+A I++
Sbjct: 188 SSASGM-LPV-PLLTVYSATKAFVDFFSQCLHEEYKSKGIFVQSVLPFFVATKLAKIRKP 245
Query: 252 SFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVLSILPEKLIDAGRLQFSIGIRKRG 311
+ PS + + ++A++ +G + T Y H+ + + SILP + + F+ +R R
Sbjct: 246 TLDKPSAETFVKSAIKTVGLQTRTTGYVIHAIMGSINSILPRWIYFKTIMGFNKSLRNR- 304
Query: 312 QLKDARK 318
LK +K
Sbjct: 305 YLKKTKK 311
|
|
| MGI|MGI:1926967 Hsd17b12 "hydroxysteroid (17-beta) dehydrogenase 12" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 112/270 (41%), Positives = 177/270 (65%)
Query: 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVV 110
+ G WA+VTG TDGIGK++A +LAK G+ +VL+ R+ DKL VS++I+ K+ + +++
Sbjct: 48 RLGEWAVVTGGTDGIGKAYAEELAKRGMKIVLISRSQDKLNQVSNNIKEKF-NVETRTIA 106
Query: 111 VDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQV--LLKNLIKVNVEG 168
VDFS LD+ ++IK + GL++GVL+NNVG+SY Y +F E+ + +K LI +NV
Sbjct: 107 VDFS--LDDIYDKIKTGLSGLEIGVLVNNVGMSYEYPEYFLEIPDLDNTIKKLININVLS 164
Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
KVT+ VLPGM++R KG I+NI S + + +P PL ++Y+ATKA++D FS+ L+ EY+
Sbjct: 165 VCKVTRLVLPGMVERSKGVILNISSASGM-LPV-PLLTIYSATKAFVDFFSQCLHEEYKS 222
Query: 229 SGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVL 288
GI VQ +P VATK+A I++ + PS + + ++A++ +G + T Y HS + +
Sbjct: 223 KGIFVQSVMPYLVATKLAKIQKPTLDKPSAETFVKSAIKTVGLQTRTTGYVIHSLMGSIN 282
Query: 289 SILPEKLIDAGRLQFSIGIRKRGQLKDARK 318
SI+P + + FS +R R LK +K
Sbjct: 283 SIMPRWMYFKIIMGFSKSLRNR-YLKKRKK 311
|
|
| UNIPROTKB|E2RJ79 HSD17B12 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 113/269 (42%), Positives = 177/269 (65%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G WA+VTG TDGIGKS+A +LAK G+ +VL+ R+ DKL VS I+ K+ K + ++V VD
Sbjct: 50 GEWAVVTGSTDGIGKSYAEELAKHGMKVVLISRSQDKLNQVSSEIREKF-KVETRTVAVD 108
Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQV--LLKNLIKVNVEGTT 170
F+ + + ++IK ++ GL +GVL+NNVG+SY Y +F +V + +K LI +NV
Sbjct: 109 FASE--DIYDKIKTSLAGLKIGVLVNNVGMSYEYPEYFLDVPDLDNTIKKLININVLSVC 166
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
K+T+ VLPGM++R KGAI+NI S + + P PL ++Y+ATKA++D FSR L+ EYR G
Sbjct: 167 KMTRLVLPGMVERSKGAILNISSASGMA-PV-PLLAIYSATKAFVDFFSRCLHEEYRSKG 224
Query: 231 IDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVLSI 290
I VQ +P YVATK++ I++ + PS + Y ++A++ +G + T Y HS + ++S
Sbjct: 225 IFVQSVLPYYVATKLSKIRKPTLDKPSAETYVKSAIQTVGLQSRTTGYLIHSLMDSIISA 284
Query: 291 LPEKLIDAGRLQFSIGIRKRGQ-LKDARK 318
+P L ++ ++G R + +K A+K
Sbjct: 285 MPTWLYF--KITMNLGKSTRARYMKKAKK 311
|
|
| FB|FBgn0029975 CG1444 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
Identities = 120/321 (37%), Positives = 195/321 (60%)
Query: 11 TQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRP-----AKNLRKYGSWALVTGPTDGI 65
+Q L LL IG + ++ +L W+Y N + P + +L K G WA+VTG TDGI
Sbjct: 6 SQVLSLLGGLAIGIVG-FQVFRKVLPWIYANVVGPKVFGSSVDLSKMGEWAVVTGSTDGI 64
Query: 66 GKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIK 125
GK++A +LA+ GL LVL+ R+ +KL V+ I KY +++ + VDF+G DE ++I+
Sbjct: 65 GKAYAKELARRGLKLVLISRSLEKLNVVAKEIGDKYG-VEVRVIDVDFTGG-DEIYDKIR 122
Query: 126 EAIEGLDVGVLINNVGISYPYARFF---HEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK 182
E GL+VGVL+NNVGISY + +F ++ D L+N++ N+ T +T LPGM+
Sbjct: 123 EKTTGLNVGVLVNNVGISYGHPEYFLDCYKADPPFLRNIVAANIHSVTHMTALFLPGMIS 182
Query: 183 RKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVA 242
+++G I+N+ S A VIP+ PL SVY++TKA++++FS L EY++ GI +Q P +VA
Sbjct: 183 QRRGVIINVSSTAG-VIPN-PLLSVYSSTKAFVNKFSDDLQTEYKEHGILIQSVQPGFVA 240
Query: 243 TKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVL----SILPEKLIDA 298
T M+ I+++S F PS + Y R+A+ +G Y PH+ + V+ ++ E+
Sbjct: 241 TNMSKIRKASVFAPSPETYVRSALSTLGIATQTAGYLPHALLQLVIHFTEAVFGEQFARN 300
Query: 299 GRLQFSIGIRKRGQLKDARKK 319
++ +G RKR + A+++
Sbjct: 301 IVMKNILGTRKRALRRLAKEQ 321
|
|
| UNIPROTKB|Q5E9H7 HSD17B12 "Estradiol 17-beta-dehydrogenase 12" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 117/284 (41%), Positives = 178/284 (62%)
Query: 19 LFTIGSLSVLRLAFVILNWVYVNF----LRPAKNLRKY-GSWALVTGPTDGIGKSFAFQL 73
L+ +G+ +V LA I W + L + + G WA+VTG TDGIGKS+A +L
Sbjct: 11 LYWVGASTVAYLALRISCWFFTALRVWGLGHEAGVGPWLGEWAVVTGGTDGIGKSYAEEL 70
Query: 74 AKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV 133
AK G+ +VL+ R+ DKL VS I K+ K + K++ VDF+ + + ++IK ++ GL++
Sbjct: 71 AKRGMKIVLISRSQDKLDQVSSEISEKF-KVETKTIAVDFTSE--DIYDKIKASLAGLNI 127
Query: 134 GVLINNVGISYPYARFFHEVDQV--LLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNI 191
GVL+NNVG+SY Y +F +V + +K LI VN K+T+ VLPGM++R KGAI+NI
Sbjct: 128 GVLVNNVGMSYEYPEYFLDVPDLDNTIKKLITVNALSVCKMTRLVLPGMVERSKGAILNI 187
Query: 192 GSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRS 251
S + + P PL ++Y+ATKA++D FS+ L+ EY+ G+ VQ +P YVATK+A IKR
Sbjct: 188 SSASGMY-PV-PLLTIYSATKAFVDFFSQCLHEEYKSKGVIVQSVLPYYVATKLAKIKRP 245
Query: 252 SFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVLSILPEKL 295
++ PS + + ++AM+ IG + Y HS + V + LP L
Sbjct: 246 TWDKPSPETFVKSAMKTIGVQSRTNGYPIHSLVASVSASLPSWL 289
|
|
| ZFIN|ZDB-GENE-030131-1346 hsd17b12b "hydroxysteroid (17-beta) dehydrogenase 12b" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 115/312 (36%), Positives = 191/312 (61%)
Query: 18 ALFTIGSLSVLRLAFVILNWVYVNFLRP----AKNLRK---YGSWALVTGPTDGIGKSFA 70
ALF +G+++VL L+ L W +N +R NL + G WA+VTG TDGIGK++A
Sbjct: 7 ALFWVGAVTVLWLSVSSL-WSLINGIRVWILGNGNLMRASSLGKWAVVTGATDGIGKAYA 65
Query: 71 FQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130
+LA+ G +VL+ R +KL +VS +I++KY K + K++ DF G +D +I+ + G
Sbjct: 66 EELARRGFAIVLISRTQEKLDEVSKAIESKY-KVETKTISADF-GSVDI-YPKIESGLAG 122
Query: 131 LDVGVLINNVGISYPYARFFHEVDQV--LLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAI 188
L++GVL+NNVG+SY Y FF + V + N+I +N+ ++T+ VLP M+ R KG I
Sbjct: 123 LEIGVLVNNVGVSYSYPEFFLNIPDVDSFINNMININIMSVCQMTRLVLPRMVDRSKGVI 182
Query: 189 VNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI 248
+N+ S + + P PL ++Y++TKA++D FSR L EY+ GI +Q +P YV TK++ I
Sbjct: 183 LNVASASGMY-PV-PLLTLYSSTKAFVDFFSRGLDAEYKSKGIIIQSVLPFYVTTKLSKI 240
Query: 249 KRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFI-WGVLSILPEKLIDAGRLQFSIGI 307
++ + +P+ + Y +A + IG + Y PH+ + W S+LP KL++ + +G+
Sbjct: 241 RKPTLDIPTPERYVKAQLSTIGLQTQSNGYLPHAIMGWVTASLLPAKLLN--KYVMGMGL 298
Query: 308 RKRGQLKDARKK 319
+R + +K+
Sbjct: 299 SQRARYLKKQKQ 310
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q09517 | LE767_CAEEL | 1, ., 1, ., 1, ., - | 0.3653 | 0.8343 | 0.8449 | yes | no |
| Q5E9H7 | DHB12_BOVIN | 1, ., 3, ., 1, ., - | 0.4084 | 0.85 | 0.8717 | yes | no |
| B2B3L4 | MKAR_PODAN | 1, ., 1, ., 1, ., - | 0.3677 | 0.9187 | 0.8647 | yes | no |
| A2QCH3 | MKAR_ASPNC | 1, ., 1, ., 1, ., - | 0.3353 | 0.9812 | 0.9075 | yes | no |
| Q6P7R8 | DHB12_RAT | 1, ., 3, ., 1, ., - | 0.4185 | 0.8187 | 0.8397 | yes | no |
| Q28IU1 | DHB12_XENTR | 1, ., 1, ., 1, ., 6, 2 | 0.3851 | 0.8968 | 0.8968 | yes | no |
| Q6P3L6 | DH12A_DANRE | 1, ., 1, ., 1, ., 6, 2 | 0.3729 | 0.8718 | 0.8746 | yes | no |
| Q8L9C4 | KCR1_ARATH | 1, ., 1, ., 1, ., 3, 3, 0 | 0.6593 | 0.9937 | 1.0 | yes | no |
| Q4X117 | MKAR_ASPFU | 1, ., 1, ., 1, ., - | 0.3248 | 0.9312 | 0.8637 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.1.1 | 0.766 |
| 4th Layer | 1.1.1.62 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 320 | |||
| PLN02780 | 320 | PLN02780, PLN02780, ketoreductase/ oxidoreductase | 0.0 | |
| cd05356 | 239 | cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst | 1e-110 | |
| COG0300 | 265 | COG0300, DltE, Short-chain dehydrogenases of vario | 7e-51 | |
| cd05233 | 234 | cd05233, SDR_c, classical (c) SDRs | 2e-39 | |
| PRK07666 | 239 | PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) | 4e-37 | |
| cd05374 | 248 | cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster | 2e-32 | |
| cd05332 | 257 | cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste | 4e-32 | |
| COG4221 | 246 | COG4221, COG4221, Short-chain alcohol dehydrogenas | 1e-31 | |
| cd05350 | 239 | cd05350, SDR_c6, classical (c) SDR, subgroup 6 | 1e-30 | |
| cd08939 | 239 | cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine | 4e-30 | |
| cd05370 | 228 | cd05370, SDR_c2, classical (c) SDR, subgroup 2 | 5e-30 | |
| COG1028 | 251 | COG1028, FabG, Dehydrogenases with different speci | 5e-30 | |
| cd05333 | 240 | cd05333, BKR_SDR_c, beta-Keto acyl carrier protein | 5e-29 | |
| PRK07454 | 241 | PRK07454, PRK07454, short chain dehydrogenase; Pro | 1e-28 | |
| cd05339 | 243 | cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy | 2e-28 | |
| cd05346 | 249 | cd05346, SDR_c5, classical (c) SDR, subgroup 5 | 3e-28 | |
| TIGR01830 | 239 | TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier | 5e-28 | |
| cd05347 | 248 | cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena | 2e-27 | |
| PRK05557 | 248 | PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) | 4e-27 | |
| PRK08226 | 263 | PRK08226, PRK08226, short chain dehydrogenase; Pro | 6e-27 | |
| PRK07231 | 251 | PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) | 8e-27 | |
| cd05364 | 253 | cd05364, SDR_c11, classical (c) SDR, subgroup 11 | 1e-26 | |
| PRK12826 | 251 | PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote | 4e-26 | |
| PRK05653 | 246 | PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) | 6e-26 | |
| PRK05866 | 293 | PRK05866, PRK05866, short chain dehydrogenase; Pro | 2e-25 | |
| cd05325 | 233 | cd05325, carb_red_sniffer_like_SDR_c, carbonyl red | 2e-25 | |
| PRK05565 | 247 | PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) | 6e-25 | |
| PRK09242 | 257 | PRK09242, PRK09242, tropinone reductase; Provision | 3e-24 | |
| PRK09072 | 263 | PRK09072, PRK09072, short chain dehydrogenase; Pro | 4e-24 | |
| cd08934 | 243 | cd08934, CAD_SDR_c, clavulanic acid dehydrogenase | 6e-24 | |
| PRK07201 | 657 | PRK07201, PRK07201, short chain dehydrogenase; Pro | 1e-23 | |
| cd05323 | 244 | cd05323, ADH_SDR_c_like, insect type alcohol dehyd | 2e-23 | |
| PRK12825 | 249 | PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-23 | |
| cd05324 | 225 | cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu | 4e-23 | |
| COG3967 | 245 | COG3967, DltE, Short-chain dehydrogenase involved | 4e-23 | |
| PRK06114 | 254 | PRK06114, PRK06114, short chain dehydrogenase; Pro | 2e-22 | |
| TIGR01963 | 255 | TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase | 2e-22 | |
| cd05344 | 253 | cd05344, BKR_like_SDR_like, putative beta-ketoacyl | 7e-22 | |
| cd05362 | 243 | cd05362, THN_reductase-like_SDR_c, tetrahydroxynap | 7e-22 | |
| PRK12829 | 264 | PRK12829, PRK12829, short chain dehydrogenase; Pro | 3e-21 | |
| cd05368 | 241 | cd05368, DHRS6_like_SDR_c, human DHRS6-like, class | 4e-21 | |
| PRK12824 | 245 | PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro | 5e-21 | |
| PRK12939 | 250 | PRK12939, PRK12939, short chain dehydrogenase; Pro | 6e-21 | |
| cd08944 | 246 | cd08944, SDR_c12, classical (c) SDR, subgroup 12 | 2e-20 | |
| PRK06484 | 520 | PRK06484, PRK06484, short chain dehydrogenase; Val | 2e-20 | |
| cd05351 | 244 | cd05351, XR_like_SDR_c, xylulose reductase-like, c | 2e-20 | |
| cd08930 | 250 | cd08930, SDR_c8, classical (c) SDR, subgroup 8 | 3e-20 | |
| PRK08085 | 254 | PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro | 4e-20 | |
| PRK06181 | 263 | PRK06181, PRK06181, short chain dehydrogenase; Pro | 7e-20 | |
| cd05329 | 251 | cd05329, TR_SDR_c, tropinone reductase-I and II (T | 9e-20 | |
| PRK06914 | 280 | PRK06914, PRK06914, short chain dehydrogenase; Pro | 1e-19 | |
| PRK07825 | 273 | PRK07825, PRK07825, short chain dehydrogenase; Pro | 4e-19 | |
| PRK13394 | 262 | PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas | 1e-18 | |
| cd05352 | 252 | cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M | 1e-18 | |
| PRK12429 | 258 | PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas | 1e-18 | |
| TIGR03206 | 250 | TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy | 1e-18 | |
| TIGR04316 | 250 | TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben | 1e-18 | |
| cd05327 | 269 | cd05327, retinol-DH_like_SDR_c_like, retinol dehyd | 2e-18 | |
| PRK05872 | 296 | PRK05872, PRK05872, short chain dehydrogenase; Pro | 2e-18 | |
| PRK06949 | 258 | PRK06949, PRK06949, short chain dehydrogenase; Pro | 5e-18 | |
| TIGR01829 | 242 | TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta | 5e-18 | |
| cd05354 | 235 | cd05354, SDR_c7, classical (c) SDR, subgroup 7 | 5e-18 | |
| cd05341 | 247 | cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta | 6e-18 | |
| cd05343 | 250 | cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c | 7e-18 | |
| PRK06179 | 270 | PRK06179, PRK06179, short chain dehydrogenase; Pro | 1e-17 | |
| cd05353 | 250 | cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)- | 1e-17 | |
| PRK07523 | 255 | PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro | 1e-17 | |
| PRK06172 | 253 | PRK06172, PRK06172, short chain dehydrogenase; Pro | 1e-17 | |
| PRK08277 | 278 | PRK08277, PRK08277, D-mannonate oxidoreductase; Pr | 1e-17 | |
| cd05369 | 249 | cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta | 1e-17 | |
| PRK07074 | 257 | PRK07074, PRK07074, short chain dehydrogenase; Pro | 2e-17 | |
| PRK08264 | 238 | PRK08264, PRK08264, short chain dehydrogenase; Val | 3e-17 | |
| PRK10538 | 248 | PRK10538, PRK10538, malonic semialdehyde reductase | 3e-17 | |
| PRK07109 | 334 | PRK07109, PRK07109, short chain dehydrogenase; Pro | 3e-17 | |
| PRK07063 | 260 | PRK07063, PRK07063, short chain dehydrogenase; Pro | 3e-17 | |
| cd08932 | 223 | cd08932, HetN_like_SDR_c, HetN oxidoreductase-like | 3e-17 | |
| cd08945 | 258 | cd08945, PKR_SDR_c, Polyketide ketoreductase, clas | 4e-17 | |
| pfam00106 | 167 | pfam00106, adh_short, short chain dehydrogenase | 4e-17 | |
| PRK05650 | 270 | PRK05650, PRK05650, short chain dehydrogenase; Pro | 4e-17 | |
| cd05367 | 241 | cd05367, SPR-like_SDR_c, sepiapterin reductase (SP | 5e-17 | |
| PRK08213 | 259 | PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro | 6e-17 | |
| cd05326 | 249 | cd05326, secoisolariciresinol-DH_like_SDR_c, secoi | 7e-17 | |
| cd08931 | 227 | cd08931, SDR_c9, classical (c) SDR, subgroup 9 | 7e-17 | |
| PRK07060 | 245 | PRK07060, PRK07060, short chain dehydrogenase; Pro | 8e-17 | |
| PRK07097 | 265 | PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro | 9e-17 | |
| PRK07890 | 258 | PRK07890, PRK07890, short chain dehydrogenase; Pro | 2e-16 | |
| TIGR02415 | 254 | TIGR02415, 23BDH, acetoin reductases | 2e-16 | |
| PRK06463 | 255 | PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) | 3e-16 | |
| PRK12823 | 260 | PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1 | 3e-16 | |
| PRK08589 | 272 | PRK08589, PRK08589, short chain dehydrogenase; Val | 3e-16 | |
| cd08940 | 258 | cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge | 4e-16 | |
| PRK06138 | 252 | PRK06138, PRK06138, short chain dehydrogenase; Pro | 5e-16 | |
| PRK06841 | 255 | PRK06841, PRK06841, short chain dehydrogenase; Pro | 7e-16 | |
| cd05359 | 242 | cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c | 7e-16 | |
| cd08935 | 271 | cd08935, mannonate_red_SDR_c, putative D-mannonate | 7e-16 | |
| cd05360 | 233 | cd05360, SDR_c3, classical (c) SDR, subgroup 3 | 1e-15 | |
| PRK08945 | 247 | PRK08945, PRK08945, putative oxoacyl-(acyl carrier | 2e-15 | |
| PRK12828 | 239 | PRK12828, PRK12828, short chain dehydrogenase; Pro | 2e-15 | |
| PRK08267 | 260 | PRK08267, PRK08267, short chain dehydrogenase; Pro | 2e-15 | |
| PRK07577 | 234 | PRK07577, PRK07577, short chain dehydrogenase; Pro | 2e-15 | |
| PRK06182 | 273 | PRK06182, PRK06182, short chain dehydrogenase; Val | 2e-15 | |
| cd08937 | 256 | cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa | 3e-15 | |
| cd05358 | 253 | cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc | 4e-15 | |
| PRK07326 | 237 | PRK07326, PRK07326, short chain dehydrogenase; Pro | 4e-15 | |
| PRK09291 | 257 | PRK09291, PRK09291, short chain dehydrogenase; Pro | 4e-15 | |
| cd08942 | 250 | cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy | 6e-15 | |
| cd05340 | 236 | cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li | 7e-15 | |
| PRK06171 | 266 | PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro | 7e-15 | |
| cd05338 | 246 | cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena | 8e-15 | |
| cd05345 | 248 | cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl | 2e-14 | |
| cd05365 | 242 | cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi | 2e-14 | |
| PRK12936 | 245 | PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote | 2e-14 | |
| PRK06180 | 277 | PRK06180, PRK06180, short chain dehydrogenase; Pro | 4e-14 | |
| PRK07067 | 257 | PRK07067, PRK07067, sorbitol dehydrogenase; Provis | 6e-14 | |
| PRK08251 | 248 | PRK08251, PRK08251, short chain dehydrogenase; Pro | 6e-14 | |
| PRK07774 | 250 | PRK07774, PRK07774, short chain dehydrogenase; Pro | 7e-14 | |
| PRK06484 | 520 | PRK06484, PRK06484, short chain dehydrogenase; Val | 1e-13 | |
| cd09763 | 265 | cd09763, DHRS1-like_SDR_c, human dehydrogenase/red | 1e-13 | |
| PRK12935 | 247 | PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro | 1e-13 | |
| cd05331 | 244 | cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz | 1e-13 | |
| PRK08324 | 681 | PRK08324, PRK08324, short chain dehydrogenase; Val | 1e-13 | |
| PRK05693 | 274 | PRK05693, PRK05693, short chain dehydrogenase; Pro | 1e-13 | |
| PRK06523 | 260 | PRK06523, PRK06523, short chain dehydrogenase; Pro | 2e-13 | |
| TIGR01832 | 248 | TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena | 2e-13 | |
| PRK06194 | 287 | PRK06194, PRK06194, hypothetical protein; Provisio | 2e-13 | |
| PRK06550 | 235 | PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) | 3e-13 | |
| PRK07069 | 251 | PRK07069, PRK07069, short chain dehydrogenase; Val | 3e-13 | |
| cd05349 | 246 | cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl | 3e-13 | |
| PRK07832 | 272 | PRK07832, PRK07832, short chain dehydrogenase; Pro | 5e-13 | |
| cd05366 | 257 | cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol | 6e-13 | |
| PRK12937 | 245 | PRK12937, PRK12937, short chain dehydrogenase; Pro | 6e-13 | |
| cd05330 | 257 | cd05330, cyclohexanol_reductase_SDR_c, cyclohexano | 8e-13 | |
| TIGR01500 | 256 | TIGR01500, sepiapter_red, sepiapterin reductase | 8e-13 | |
| PRK08265 | 261 | PRK08265, PRK08265, short chain dehydrogenase; Pro | 9e-13 | |
| PRK12827 | 249 | PRK12827, PRK12827, short chain dehydrogenase; Pro | 1e-12 | |
| PRK08220 | 252 | PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy | 1e-12 | |
| PRK08063 | 250 | PRK08063, PRK08063, enoyl-(acyl carrier protein) r | 1e-12 | |
| PRK08263 | 275 | PRK08263, PRK08263, short chain dehydrogenase; Pro | 1e-12 | |
| cd08929 | 226 | cd08929, SDR_c4, classical (c) SDR, subgroup 4 | 1e-12 | |
| PRK07775 | 274 | PRK07775, PRK07775, short chain dehydrogenase; Pro | 2e-12 | |
| PRK06101 | 240 | PRK06101, PRK06101, short chain dehydrogenase; Pro | 2e-12 | |
| PRK07035 | 252 | PRK07035, PRK07035, short chain dehydrogenase; Pro | 2e-12 | |
| cd05355 | 270 | cd05355, SDR_c1, classical (c) SDR, subgroup 1 | 7e-12 | |
| PRK06124 | 256 | PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro | 8e-12 | |
| PRK06077 | 252 | PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) | 8e-12 | |
| cd09805 | 281 | cd09805, type2_17beta_HSD-like_SDR_c, human 17beta | 9e-12 | |
| PRK07856 | 252 | PRK07856, PRK07856, short chain dehydrogenase; Pro | 2e-11 | |
| PRK06500 | 249 | PRK06500, PRK06500, short chain dehydrogenase; Pro | 2e-11 | |
| cd05373 | 238 | cd05373, SDR_c10, classical (c) SDR, subgroup 10 | 2e-11 | |
| PRK06398 | 258 | PRK06398, PRK06398, aldose dehydrogenase; Validate | 2e-11 | |
| PRK07677 | 252 | PRK07677, PRK07677, short chain dehydrogenase; Pro | 3e-11 | |
| cd05337 | 255 | cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl | 3e-11 | |
| PLN02253 | 280 | PLN02253, PLN02253, xanthoxin dehydrogenase | 3e-11 | |
| PRK08217 | 253 | PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) | 3e-11 | |
| PRK08219 | 227 | PRK08219, PRK08219, short chain dehydrogenase; Pro | 4e-11 | |
| cd09806 | 258 | cd09806, type1_17beta-HSD-like_SDR_c, human estrog | 9e-11 | |
| PRK06057 | 255 | PRK06057, PRK06057, short chain dehydrogenase; Pro | 1e-10 | |
| PRK08643 | 256 | PRK08643, PRK08643, acetoin reductase; Validated | 1e-10 | |
| PRK08936 | 261 | PRK08936, PRK08936, glucose-1-dehydrogenase; Provi | 1e-10 | |
| PRK07814 | 263 | PRK07814, PRK07814, short chain dehydrogenase; Pro | 2e-10 | |
| cd08936 | 256 | cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re | 2e-10 | |
| PRK06701 | 290 | PRK06701, PRK06701, short chain dehydrogenase; Pro | 2e-10 | |
| TIGR03971 | 265 | TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil | 2e-10 | |
| PRK06935 | 258 | PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog | 3e-10 | |
| cd02266 | 186 | cd02266, SDR, Short-chain dehydrogenases/reductase | 3e-10 | |
| PRK06198 | 260 | PRK06198, PRK06198, short chain dehydrogenase; Pro | 3e-10 | |
| PRK09730 | 247 | PRK09730, PRK09730, putative NAD(P)-binding oxidor | 3e-10 | |
| PRK08642 | 253 | PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) | 4e-10 | |
| PRK05867 | 253 | PRK05867, PRK05867, short chain dehydrogenase; Pro | 5e-10 | |
| PRK12743 | 256 | PRK12743, PRK12743, oxidoreductase; Provisional | 5e-10 | |
| PRK12745 | 256 | PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote | 8e-10 | |
| PRK07478 | 254 | PRK07478, PRK07478, short chain dehydrogenase; Pro | 8e-10 | |
| cd05363 | 254 | cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), | 9e-10 | |
| PRK12747 | 252 | PRK12747, PRK12747, short chain dehydrogenase; Pro | 9e-10 | |
| PRK05875 | 276 | PRK05875, PRK05875, short chain dehydrogenase; Pro | 1e-09 | |
| PRK12481 | 251 | PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog | 2e-09 | |
| cd08943 | 250 | cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al | 3e-09 | |
| PRK08628 | 258 | PRK08628, PRK08628, short chain dehydrogenase; Pro | 3e-09 | |
| PRK06125 | 259 | PRK06125, PRK06125, short chain dehydrogenase; Pro | 4e-09 | |
| PRK07576 | 264 | PRK07576, PRK07576, short chain dehydrogenase; Pro | 6e-09 | |
| PRK12938 | 246 | PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro | 6e-09 | |
| PRK06123 | 248 | PRK06123, PRK06123, short chain dehydrogenase; Pro | 1e-08 | |
| PRK09135 | 249 | PRK09135, PRK09135, pteridine reductase; Provision | 4e-08 | |
| PRK06482 | 276 | PRK06482, PRK06482, short chain dehydrogenase; Pro | 4e-08 | |
| PRK07024 | 257 | PRK07024, PRK07024, short chain dehydrogenase; Pro | 6e-08 | |
| PRK06128 | 300 | PRK06128, PRK06128, oxidoreductase; Provisional | 6e-08 | |
| PRK06924 | 251 | PRK06924, PRK06924, short chain dehydrogenase; Pro | 6e-08 | |
| cd05357 | 234 | cd05357, PR_SDR_c, pteridine reductase (PR), class | 8e-08 | |
| cd09808 | 255 | cd09808, DHRS-12_like_SDR_c-like, human dehydrogen | 8e-08 | |
| PRK12746 | 254 | PRK12746, PRK12746, short chain dehydrogenase; Pro | 8e-08 | |
| PRK12748 | 256 | PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote | 9e-08 | |
| PRK05855 | 582 | PRK05855, PRK05855, short chain dehydrogenase; Val | 9e-08 | |
| PRK08017 | 256 | PRK08017, PRK08017, oxidoreductase; Provisional | 1e-07 | |
| PRK08993 | 253 | PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog | 1e-07 | |
| PRK07985 | 294 | PRK07985, PRK07985, oxidoreductase; Provisional | 2e-07 | |
| PRK07023 | 243 | PRK07023, PRK07023, short chain dehydrogenase; Pro | 2e-07 | |
| PRK12859 | 256 | PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote | 3e-07 | |
| cd05371 | 252 | cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr | 3e-07 | |
| PRK06113 | 255 | PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro | 3e-07 | |
| TIGR02632 | 676 | TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate | 3e-07 | |
| PRK07062 | 265 | PRK07062, PRK07062, short chain dehydrogenase; Pro | 8e-07 | |
| cd09761 | 242 | cd09761, A3DFK9-like_SDR_c, Clostridium thermocell | 9e-07 | |
| PRK05876 | 275 | PRK05876, PRK05876, short chain dehydrogenase; Pro | 1e-06 | |
| PRK07102 | 243 | PRK07102, PRK07102, short chain dehydrogenase; Pro | 3e-06 | |
| PRK06139 | 330 | PRK06139, PRK06139, short chain dehydrogenase; Pro | 3e-06 | |
| PRK09186 | 256 | PRK09186, PRK09186, flagellin modification protein | 5e-06 | |
| PRK12384 | 259 | PRK12384, PRK12384, sorbitol-6-phosphate dehydroge | 6e-06 | |
| cd08933 | 261 | cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl | 6e-06 | |
| PRK08339 | 263 | PRK08339, PRK08339, short chain dehydrogenase; Pro | 1e-05 | |
| TIGR01831 | 239 | TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote | 2e-05 | |
| cd09762 | 243 | cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro | 2e-05 | |
| cd05328 | 250 | cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de | 2e-05 | |
| PRK05854 | 313 | PRK05854, PRK05854, short chain dehydrogenase; Pro | 3e-05 | |
| PRK06197 | 306 | PRK06197, PRK06197, short chain dehydrogenase; Pro | 3e-05 | |
| pfam13561 | 239 | pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote | 3e-05 | |
| cd11730 | 206 | cd11730, Tthb094_like_SDR_c, Tthb094 and related p | 4e-05 | |
| PRK08278 | 273 | PRK08278, PRK08278, short chain dehydrogenase; Pro | 5e-05 | |
| PRK07831 | 262 | PRK07831, PRK07831, short chain dehydrogenase; Pro | 5e-05 | |
| PRK08340 | 259 | PRK08340, PRK08340, glucose-1-dehydrogenase; Provi | 5e-05 | |
| cd01078 | 194 | cd01078, NAD_bind_H4MPT_DH, NADP binding domain of | 1e-04 | |
| PRK08655 | 437 | PRK08655, PRK08655, prephenate dehydrogenase; Prov | 4e-04 | |
| PRK06947 | 248 | PRK06947, PRK06947, glucose-1-dehydrogenase; Provi | 6e-04 | |
| PRK08703 | 239 | PRK08703, PRK08703, short chain dehydrogenase; Pro | 7e-04 | |
| PRK06196 | 315 | PRK06196, PRK06196, oxidoreductase; Provisional | 7e-04 | |
| PRK05993 | 277 | PRK05993, PRK05993, short chain dehydrogenase; Pro | 0.001 | |
| cd08951 | 260 | cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 | 0.003 | |
| PRK08177 | 225 | PRK08177, PRK08177, short chain dehydrogenase; Pro | 0.003 | |
| pfam13460 | 182 | pfam13460, NAD_binding_10, NADH(P)-binding | 0.004 | |
| cd09807 | 274 | cd09807, retinol-DH_like_SDR_c, retinol dehydrogen | 0.004 | |
| PRK07792 | 306 | PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) | 0.004 |
| >gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Score = 605 bits (1562), Expect = 0.0
Identities = 265/320 (82%), Positives = 295/320 (92%)
Query: 1 MESCFLNTLKTQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGSWALVTG 60
ME CF++ LK+QPLWLL LF +GSLS+L+ F ILNWVYV FLRPAKNL+KYGSWALVTG
Sbjct: 1 MELCFVDKLKSQPLWLLVLFVLGSLSILKFFFTILNWVYVYFLRPAKNLKKYGSWALVTG 60
Query: 61 PTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEG 120
PTDGIGK FAFQLA+ GLNLVLV RNPDKLKDVSDSIQ+KY+KTQIK+VVVDFSGD+DEG
Sbjct: 61 PTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEG 120
Query: 121 VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGM 180
V+RIKE IEGLDVGVLINNVG+SYPYARFFHEVD+ LLKNLIKVNVEGTTKVTQAVLPGM
Sbjct: 121 VKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGM 180
Query: 181 LKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLY 240
LKRKKGAI+NIGSGAAIVIPSDPLY+VYAATKAYIDQFSR LYVEY+KSGIDVQCQVPLY
Sbjct: 181 LKRKKGAIINIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLY 240
Query: 241 VATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVLSILPEKLIDAGR 300
VATKMASI+RSSF VPS+D YARAA+RW+GYEP CTPYWPHS IWG++S LPE +D+ R
Sbjct: 241 VATKMASIRRSSFLVPSSDGYARAALRWVGYEPRCTPYWPHSLIWGLISALPESAVDSWR 300
Query: 301 LQFSIGIRKRGQLKDARKKE 320
L+F + IRK+GQ KD+RKKE
Sbjct: 301 LKFCLQIRKKGQQKDSRKKE 320
|
Length = 320 |
| >gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 320 bits (822), Expect = e-110
Identities = 116/241 (48%), Positives = 168/241 (69%), Gaps = 4/241 (1%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G+WA+VTG TDGIGK++A +LAK G N++L+ R +KL V+ I+ KY + K++ D
Sbjct: 1 GTWAVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKY-GVETKTIAAD 59
Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
FS D+ ERI++ +EGLD+G+L+NNVGIS+ +F E + L+++I VNV T K+
Sbjct: 60 FS-AGDDIYERIEKELEGLDIGILVNNVGISHSIPEYFLETPEDELQDIINVNVMATLKM 118
Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
T+ +LPGM+KRKKGAIVNI S A +IP+ PL + Y+A+KA++D FSR+LY EY+ GID
Sbjct: 119 TRLILPGMVKRKKGAIVNISSFAG-LIPT-PLLATYSASKAFLDFFSRALYEEYKSQGID 176
Query: 233 VQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVLSILP 292
VQ +P VATKM+ I++SS FVPS + + R+A+ +G T YW H+ V ++P
Sbjct: 177 VQSLLPYLVATKMSKIRKSSLFVPSPEQFVRSALNTLGLSKRTTGYWSHALQGWVARLVP 236
Query: 293 E 293
E
Sbjct: 237 E 237
|
This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239 |
| >gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Score = 168 bits (429), Expect = 7e-51
Identities = 80/257 (31%), Positives = 133/257 (51%), Gaps = 17/257 (6%)
Query: 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVV 110
G AL+TG + GIG A QLA+ G NL+LV R DKL+ ++ ++ K +++ +
Sbjct: 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT-GVEVEVIP 62
Query: 111 VDFSGDLDEGVERIKEAIE--GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEG 168
D S E +ER+++ ++ G + VL+NN G F E+ + +I++N+
Sbjct: 63 ADLSD--PEALERLEDELKERGGPIDVLVNNAGFGTFGP--FLELSLDEEEEMIQLNILA 118
Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
T++T+AVLPGM++R G I+NIGS A ++ P +VY+ATKA++ FS +L E +
Sbjct: 119 LTRLTKAVLPGMVERGAGHIINIGSAAGLI--PTPYMAVYSATKAFVLSFSEALREELKG 176
Query: 229 SGIDVQCQVPLYVATKMASIKRS-------SFFVPSTDVYARAAMRWIG-YEPCCTPYWP 280
+G+ V P T+ K S V S + A AA++ + + P P
Sbjct: 177 TGVKVTAVCPGPTRTEFFDAKGSDVYLLSPGELVLSPEDVAEAALKALEKGKREIIPGLP 236
Query: 281 HSFIWGVLSILPEKLID 297
+ + +LP L +
Sbjct: 237 NKALALSFRLLPRSLRE 253
|
Length = 265 |
| >gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 138 bits (349), Expect = 2e-39
Identities = 66/193 (34%), Positives = 97/193 (50%), Gaps = 11/193 (5%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
ALVTG + GIG++ A +LA+ G +VL RN + L +++ + +V D S
Sbjct: 1 ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAA---IEALGGNAVAVQADVSD 57
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
D++ VE E LD+ L+NN GI+ P E+ ++ VN+ G +T
Sbjct: 58 EEDVEALVEEALEEFGRLDI--LVNNAGIARP--GPLEELTDEDWDRVLDVNLTGVFLLT 113
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
+A LP M K+ G IVNI S A + P + YAA+KA ++ +RSL +E GI V
Sbjct: 114 RAALPHMKKQGGGRIVNISSVAGLRPL--PGQAAYAASKAALEGLTRSLALELAPYGIRV 171
Query: 234 QCQVPLYVATKMA 246
P V T M
Sbjct: 172 NAVAPGLVDTPML 184
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234 |
| >gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 132 bits (334), Expect = 4e-37
Identities = 70/196 (35%), Positives = 107/196 (54%), Gaps = 10/196 (5%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G AL+TG GIG++ A LAK G+N+ L+ R + LK V++ ++A K I + V
Sbjct: 7 GKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVS 66
Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARF--FHEVDQVLLKNLIKVNVEGTT 170
++ +E++K + +D +LINN GI ++F F E+D + +I+VN+ G
Sbjct: 67 DYEEVTAAIEQLKNELGSID--ILINNAGI----SKFGKFLELDPAEWEKIIQVNLMGVY 120
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
T+AVLP M++R+ G I+NI S A + S Y+A+K + + SL E RK
Sbjct: 121 YATRAVLPSMIERQSGDIINISSTAG--QKGAAVTSAYSASKFGVLGLTESLMQEVRKHN 178
Query: 231 IDVQCQVPLYVATKMA 246
I V P VAT MA
Sbjct: 179 IRVTALTPSTVATDMA 194
|
Length = 239 |
| >gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 120 bits (303), Expect = 2e-32
Identities = 64/195 (32%), Positives = 92/195 (47%), Gaps = 15/195 (7%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
L+TG + GIG + A LA G ++ RNPDKL+ + ++ + +D +
Sbjct: 3 VLITGCSSGIGLALALALAAQGYRVIATARNPDKLES-----LGELLNDNLEVLELDVT- 56
Query: 116 DLDEGVERIKEAIE---GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
D + +KE IE +DV L+NN G E ++ L +VNV G +V
Sbjct: 57 DEESIKAAVKEVIERFGRIDV--LVNNAGYGLFGP--LEETSIEEVRELFEVNVFGPLRV 112
Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
T+A LP M K+ G IVN+ S A +V P Y A+KA ++ S SL +E GI
Sbjct: 113 TRAFLPLMRKQGSGRIVNVSSVAGLV--PTPFLGPYCASKAALEALSESLRLELAPFGIK 170
Query: 233 VQCQVPLYVATKMAS 247
V P V T A
Sbjct: 171 VTIIEPGPVRTGFAD 185
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248 |
| >gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 119 bits (302), Expect = 4e-32
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 11/193 (5%)
Query: 57 LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
++TG + GIG+ A+ LA+ G LVL R ++L++V + V +D S D
Sbjct: 7 IITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSEC-LELGAPSPHVVPLDMS-D 64
Query: 117 LDEGVERIKEAIE---GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
L++ + ++EA++ GLD +LINN GIS FH+ + + +++VN G +T
Sbjct: 65 LEDAEQVVEEALKLFGGLD--ILINNAGISMR--SLFHDTSIDVDRKIMEVNYFGPVALT 120
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
+A LP +++R +G+IV + S A + P + YAA+K + F SL E + I V
Sbjct: 121 KAALPHLIERSQGSIVVVSSIAGKI--GVPFRTAYAASKHALQGFFDSLRAELSEPNISV 178
Query: 234 QCQVPLYVATKMA 246
P + T +A
Sbjct: 179 TVVCPGLIDTNIA 191
|
Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Score = 118 bits (297), Expect = 1e-31
Identities = 62/193 (32%), Positives = 92/193 (47%), Gaps = 10/193 (5%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
AL+TG + GIG++ A LA+ G +VL R ++L+ + + ++ +D +
Sbjct: 9 ALITGASSGIGEATARALAEAGAKVVLAARREERLEA----LADEIGAGAALALALDVT- 63
Query: 116 DLDEGVERIKEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
D I+ E + +L+NN G+ E D +I NV+G T+
Sbjct: 64 DRAAVEAAIEALPEEFGRIDILVNNAGL-ALGDPL-DEADLDDWDRMIDTNVKGLLNGTR 121
Query: 175 AVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQ 234
AVLPGM++RK G I+N+GS A P +VY ATKA + FS L E +GI V
Sbjct: 122 AVLPGMVERKSGHIINLGSIAGRY--PYPGGAVYGATKAAVRAFSLGLRQELAGTGIRVT 179
Query: 235 CQVPLYVATKMAS 247
P V T S
Sbjct: 180 VISPGLVETTEFS 192
|
Length = 246 |
| >gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6 | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 1e-30
Identities = 58/248 (23%), Positives = 108/248 (43%), Gaps = 15/248 (6%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
L+TG + GIG++ A + AK G N+ L R D+L ++ + +++ + V
Sbjct: 1 VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEVEILDVTDEE 60
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
+ ++ + GLD+ ++ VG + + I N+ G + +A
Sbjct: 61 RNQLVIAELEAELGGLDLVIINAGVGKGTSLGDLSFKAF----RETIDTNLLGAAAILEA 116
Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
LP + +G +V I S AA+ P + Y+A+KA + + SL + +K GI V
Sbjct: 117 ALPQFRAKGRGHLVLISSVAALR--GLPGAAAYSASKAALSSLAESLRYDVKKRGIRVTV 174
Query: 236 QVPLYVATKMASIKRSSFFVPSTDVYARAAMRWI---GYEPCCTPYWPHSFIWG--VLSI 290
P ++ T + + + F+ S + A+ + I E P +P +L +
Sbjct: 175 INPGFIDTPLTANMFTMPFLMSVEQAAKRIYKAIKKGAAE----PTFPWRLAVPLRLLKL 230
Query: 291 LPEKLIDA 298
LPE+L
Sbjct: 231 LPERLRRR 238
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239 |
| >gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR | Back alignment and domain information |
|---|
Score = 113 bits (286), Expect = 4e-30
Identities = 61/192 (31%), Positives = 96/192 (50%), Gaps = 14/192 (7%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G L+TG + GIGK+ A +L K G N+++V R+ KL++ + I+A+ + V
Sbjct: 1 GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANAS--GQKVSY 58
Query: 113 FSGDLD--EGVER-IKEAIE-GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEG 168
S DL E VE+ +A+E G +++N GIS P F ++ + + VN G
Sbjct: 59 ISADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISIP--GLFEDLTAEEFERGMDVNYFG 116
Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL--YSVYAATKAYIDQFSRSLYVEY 226
+ V AVLP M +++ G IV + S AA+V + YS Y +K + + SL E
Sbjct: 117 SLNVAHAVLPLMKEQRPGHIVFVSSQAALV----GIYGYSAYCPSKFALRGLAESLRQEL 172
Query: 227 RKSGIDVQCQVP 238
+ I V P
Sbjct: 173 KPYNIRVSVVYP 184
|
These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239 |
| >gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2 | Back alignment and domain information |
|---|
Score = 113 bits (285), Expect = 5e-30
Identities = 64/207 (30%), Positives = 105/207 (50%), Gaps = 22/207 (10%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G+ L+TG T GIG + A + + G +++ GR ++L +AK I ++V+D
Sbjct: 5 GNTVLITGGTSGIGLALARKFLEAGNTVIITGRREERLA------EAKKELPNIHTIVLD 58
Query: 113 FSGDLDEGVERIKEAI--EGLDVGVLINNVGISYPY-----ARFFHEVDQVLLKNLIKVN 165
GD E VE + EA+ E ++ +LINN GI P A + D I N
Sbjct: 59 -VGDA-ESVEALAEALLSEYPNLDILINNAGIQRPIDLRDPASDLDKADTE-----IDTN 111
Query: 166 VEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
+ G ++ +A LP + K+ + IVN+ SG A V P VY ATKA + ++ +L +
Sbjct: 112 LIGPIRLIKAFLPHLKKQPEATIVNVSSGLAFV-PM-AANPVYCATKAALHSYTLALRHQ 169
Query: 226 YRKSGIDVQCQVPLYVATKMASIKRSS 252
+ +G++V VP V T++ +R+
Sbjct: 170 LKDTGVEVVEIVPPAVDTELHEERRNP 196
|
Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228 |
| >gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 114 bits (286), Expect = 5e-30
Identities = 67/220 (30%), Positives = 107/220 (48%), Gaps = 14/220 (6%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN--PDKLKDVSDSIQAKYAKTQIKSVVVDF 113
ALVTG + GIG++ A LA+ G +V+ R + + ++ +I+ + +V D
Sbjct: 8 ALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEA-GGGRAAAVAADV 66
Query: 114 SGDLDE---GVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
S D + V +E +D+ L+NN GI+ P A E+ + +I VN+ G
Sbjct: 67 SDDEESVEALVAAAEEEFGRIDI--LVNNAGIAGPDAPL-EELTEEDWDRVIDVNLLGAF 123
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
+T+A LP M KK IVNI S A + P P + YAA+KA + +++L +E G
Sbjct: 124 LLTRAALPLM---KKQRIVNISSVAGLGGP--PGQAAYAASKAALIGLTKALALELAPRG 178
Query: 231 IDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIG 270
I V P Y+ T M + S+ + AR + +G
Sbjct: 179 IRVNAVAPGYIDTPMTAALESAELEALKRLAARIPLGRLG 218
|
Length = 251 |
| >gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 5e-29
Identities = 61/199 (30%), Positives = 101/199 (50%), Gaps = 24/199 (12%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
ALVTG + GIG++ A +LA G + + R+ + + + I K ++ D S
Sbjct: 3 ALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEI--KALGGNAAALEADVSD 60
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVNV 166
++ VE+++ +D+ L+NN GI+ R D +L++ +I VN+
Sbjct: 61 REAVEALVEKVEAEFGPVDI--LVNNAGIT----R-----DNLLMRMSEEDWDAVINVNL 109
Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
G VTQAV+ M+KR+ G I+NI S ++ +P + YAA+KA + F++SL E
Sbjct: 110 TGVFNVTQAVIRAMIKRRSGRIINISSVVGLI--GNPGQANYAASKAGVIGFTKSLAKEL 167
Query: 227 RKSGIDVQCQVPLYVATKM 245
GI V P ++ T M
Sbjct: 168 ASRGITVNAVAPGFIDTDM 186
|
This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240 |
| >gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 1e-28
Identities = 58/186 (31%), Positives = 92/186 (49%), Gaps = 22/186 (11%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
AL+TG + GIGK+ A AK G +L LV R+ D L+ ++ +++ K + +D S
Sbjct: 9 ALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVK--AAAYSIDLS- 65
Query: 116 DLDEGVERIKEAIE-GLDVGVLINNVGISY-------PYARFFHEVDQVLLKNLIKVNVE 167
+ + I E +E VLINN G++Y P + + + +I++N+
Sbjct: 66 NPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDW---------QWVIQLNLT 116
Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
+ AVLPGM R G I+N+ S AA + P + Y +KA + F++ L E R
Sbjct: 117 SVFQCCSAVLPGMRARGGGLIINVSSIAA--RNAFPQWGAYCVSKAALAAFTKCLAEEER 174
Query: 228 KSGIDV 233
GI V
Sbjct: 175 SHGIRV 180
|
Length = 241 |
| >gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 2e-28
Identities = 67/254 (26%), Positives = 101/254 (39%), Gaps = 26/254 (10%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
L+TG GIG+ A + AK G +V++ N ++ ++ + A ++ D S
Sbjct: 2 VLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETAN--NVRKAGGKVHYYKCDVSK 59
Query: 116 DLDEGVERIKEAI--EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
E V + I E DV +LINN G+ + E+ ++ +VN T
Sbjct: 60 R--EEVYEAAKKIKKEVGDVTILINNAGV--VSGKKLLELPDEEIEKTFEVNTLAHFWTT 115
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE---YRKSG 230
+A LP ML+R G IV I S A ++ P + Y A+KA F SL +E Y K G
Sbjct: 116 KAFLPDMLERNHGHIVTIASVAGLISP--AGLADYCASKAAAVGFHESLRLELKAYGKPG 173
Query: 231 IDVQCQVPLYVATKM---ASIKRSSFFVPSTDVY-ARAAMRWI--GYEPCCTP---YWPH 281
I P ++ T M R Y A +R I + P Y+
Sbjct: 174 IKTTLVCPYFINTGMFQGVKTPRPLLAPILEPEYVAEKIVRAILTNQQMLYLPFYAYFLP 233
Query: 282 SFIWGVLSILPEKL 295
LP +
Sbjct: 234 ILKR----TLPTPV 243
|
17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243 |
| >gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5 | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 3e-28
Identities = 63/186 (33%), Positives = 102/186 (54%), Gaps = 20/186 (10%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
L+TG + GIG++ A + AK G L+L GR ++L++++D + AK+ ++ + +D S
Sbjct: 3 VLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKF-PVKVLPLQLDVS- 60
Query: 116 DLDEGVERIKEAIEGL-----DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
D E I+ A+E L D+ +L+NN G++ E D + +I NV+G
Sbjct: 61 --DR--ESIEAALENLPEEFRDIDILVNNAGLALGLDPA-QEADLEDWETMIDTNVKGLL 115
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY---SVYAATKAYIDQFSRSLYVEYR 227
VT+ +LP M+ R +G I+N+GS A Y +VY ATKA + QFS +L +
Sbjct: 116 NVTRLILPIMIARNQGHIINLGSIAGRYP-----YAGGNVYCATKAAVRQFSLNLRKDLI 170
Query: 228 KSGIDV 233
+GI V
Sbjct: 171 GTGIRV 176
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249 |
| >gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 5e-28
Identities = 61/199 (30%), Positives = 102/199 (51%), Gaps = 23/199 (11%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-PDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
ALVTG + GIG++ A +LAK G +++ R+ + ++V + ++A K V
Sbjct: 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDR 60
Query: 115 GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVNVE 167
D+ VE I+E + +D+ L+NN GI+ D +L++ +I N+
Sbjct: 61 EDVKAVVEEIEEELGPIDI--LVNNAGITR---------DNLLMRMKEEDWDAVIDTNLT 109
Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV-IPSDPLYSVYAATKAYIDQFSRSLYVEY 226
G +TQAVL M+K++ G I+NI S +V + + + YAA+KA + F++SL E
Sbjct: 110 GVFNLTQAVLRIMIKQRSGRIINISS---VVGLMGNAGQANYAASKAGVIGFTKSLAKEL 166
Query: 227 RKSGIDVQCQVPLYVATKM 245
I V P ++ T M
Sbjct: 167 ASRNITVNAVAPGFIDTDM 185
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239 |
| >gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 107 bits (268), Expect = 2e-27
Identities = 64/197 (32%), Positives = 99/197 (50%), Gaps = 12/197 (6%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G ALVTG + GIG A LA+ G N+V+ RN +K ++ I+ + + D
Sbjct: 5 GKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEK--EGVEATAFTCD 62
Query: 113 FSGDLDEGVERIKEAIEGLDVG---VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
S + E ++ EAIE D G +L+NN GI + E + +++I VN+ G
Sbjct: 63 VSDE--EAIKAAVEAIEE-DFGKIDILVNNAGIIRRHP--AEEFPEAEWRDVIDVNLNGV 117
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
V+QAV M+K+ G I+NI S + + P YAA+K + +++L E+ +
Sbjct: 118 FFVSQAVARHMIKQGHGKIINICSLLSEL--GGPPVPAYAASKGGVAGLTKALATEWARH 175
Query: 230 GIDVQCQVPLYVATKMA 246
GI V P Y AT+M
Sbjct: 176 GIQVNAIAPGYFATEMT 192
|
Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248 |
| >gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 4e-27
Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 15/195 (7%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD-VSDSIQAKYAKTQIKSVVVDFS 114
ALVTG + GIG++ A +LA G N+V+ + + + + I A K +V D S
Sbjct: 8 ALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKAL--AVQGDVS 65
Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYAR--FFHEVDQVLLKNLIKVNVEGTT 170
++ V+ K G+D+ L+NN GI R + + +I N+ G
Sbjct: 66 DAESVERAVDEAKAEFGGVDI--LVNNAGI----TRDNLLMRMKEEDWDRVIDTNLTGVF 119
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
+T+AV M+K++ G I+NI S ++ +P + YAA+KA + F++SL E G
Sbjct: 120 NLTKAVARPMMKQRSGRIINISSVVGLM--GNPGQANYAASKAGVIGFTKSLARELASRG 177
Query: 231 IDVQCQVPLYVATKM 245
I V P ++ T M
Sbjct: 178 ITVNAVAPGFIETDM 192
|
Length = 248 |
| >gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 106 bits (265), Expect = 6e-27
Identities = 72/203 (35%), Positives = 106/203 (52%), Gaps = 11/203 (5%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G AL+TG GIG+ A A+ G NL+L+ +P+ K + + T + + V D
Sbjct: 6 GKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRD 65
Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARF--FHEVDQVLLKNLIKVNVEGTT 170
+ + ++R KE +D+ L+NN G+ R F ++ I +N++G
Sbjct: 66 PAS-VAAAIKRAKEKEGRIDI--LVNNAGV----CRLGSFLDMSDEDRDFHIDINIKGVW 118
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
VT+AVLP M+ RK G IV + S ++ +DP + YA TKA I ++SL VEY +SG
Sbjct: 119 NVTKAVLPEMIARKDGRIVMMSSVTGDMV-ADPGETAYALTKAAIVGLTKSLAVEYAQSG 177
Query: 231 IDVQCQVPLYVATKMA-SIKRSS 252
I V P YV T MA SI R S
Sbjct: 178 IRVNAICPGYVRTPMAESIARQS 200
|
Length = 263 |
| >gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 105 bits (264), Expect = 8e-27
Identities = 55/191 (28%), Positives = 87/191 (45%), Gaps = 6/191 (3%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
A+VTG + GIG+ A + A G +V+ RN + + V+ I A + + V D
Sbjct: 8 AIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSD-EA 66
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
D++ V E +D +L+NN G ++ +VD+ + VNV+ TQA
Sbjct: 67 DVEAAVAAALERFGSVD--ILVNNAGTTHRN-GPLLDVDEAEFDRIFAVNVKSPYLWTQA 123
Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
+P M GAIVN+ S A + P P Y A+K + +++L E I V
Sbjct: 124 AVPAMRGEGGGAIVNVASTAGLR-PR-PGLGWYNASKGAVITLTKALAAELGPDKIRVNA 181
Query: 236 QVPLYVATKMA 246
P+ V T +
Sbjct: 182 VAPVVVETGLL 192
|
Length = 251 |
| >gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11 | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 1e-26
Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 14/193 (7%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI-QAKYAKTQIKSVVVDFS 114
A++TG + GIG A A+ G L L GR+ ++L++ S QA ++ +I VV D +
Sbjct: 6 AIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLVVADLT 65
Query: 115 GDLDEGVERI-KEAIEG---LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
+EG +RI + LD +L+NN GI + D ++ +N+
Sbjct: 66 E--EEGQDRIISTTLAKFGRLD--ILVNNAGILAKGG--GEDQDIEEYDKVMNLNLRAVI 119
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
+T+ +P L + KG IVN+ S A S P Y +KA +DQF+R +E G
Sbjct: 120 YLTKLAVP-HLIKTKGEIVNVSSVAG--GRSFPGVLYYCISKAALDQFTRCTALELAPKG 176
Query: 231 IDVQCQVPLYVAT 243
+ V P + T
Sbjct: 177 VRVNSVSPGVIVT 189
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253 |
| >gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 4e-26
Identities = 63/191 (32%), Positives = 92/191 (48%), Gaps = 5/191 (2%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
ALVTG GIG++ A +LA G +++V D ++ ++A K + + V V
Sbjct: 9 ALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRA 68
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
L V E LD +L+ N GI P F E+D + +I VN+ GT +TQA
Sbjct: 69 ALKAAVAAGVEDFGRLD--ILVANAGIF-PLTP-FAEMDDEQWERVIDVNLTGTFLLTQA 124
Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
LP +++ G IV S A + P + YAA+KA + F+R+L +E I V
Sbjct: 125 ALPALIRAGGGRIVLTSSVAGPRVG-YPGLAHYAASKAGLVGFTRALALELAARNITVNS 183
Query: 236 QVPLYVATKMA 246
P V T MA
Sbjct: 184 VHPGGVDTPMA 194
|
Length = 251 |
| >gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 102 bits (258), Expect = 6e-26
Identities = 61/199 (30%), Positives = 100/199 (50%), Gaps = 24/199 (12%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
ALVTG + GIG++ A +LA G +V+ N + + ++ ++A + ++ +V D S
Sbjct: 8 ALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARV--LVFDVSD 65
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGIS-------YPYARFFHEVDQVLLKNLIKVNV 166
+ +E EA LD +L+NN GI+ + D+V I VN+
Sbjct: 66 EAAVRALIEAAVEAFGALD--ILVNNAGITRDALLPRMSEEDW----DRV-----IDVNL 114
Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
GT V +A LP M+K + G IVNI S + + +P + Y+A KA + F+++L +E
Sbjct: 115 TGTFNVVRAALPPMIKARYGRIVNISSVSGVT--GNPGQTNYSAAKAGVIGFTKALALEL 172
Query: 227 RKSGIDVQCQVPLYVATKM 245
GI V P ++ T M
Sbjct: 173 ASRGITVNAVAPGFIDTDM 191
|
Length = 246 |
| >gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 2e-25
Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 23/199 (11%)
Query: 57 LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
L+TG + GIG++ A Q A+ G +V V R D L V+D I A +V D S D
Sbjct: 44 LLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITR--AGGDAMAVPCDLS-D 100
Query: 117 L---DEGVERIKEAIEGLDVGVLINNVG--ISYPYARF---FHEVDQVLLKNLIKVNVEG 168
L D V +++ I G+D +LINN G I P A +H+V++ + +N
Sbjct: 101 LDAVDALVADVEKRIGGVD--ILINNAGRSIRRPLAESLDRWHDVERT-----MVLNYYA 153
Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP-SDPLYSVYAATKAYIDQFSRSLYVEYR 227
++ + + PGML+R G I+N+ + V+ + PL+SVY A+KA + SR + E+
Sbjct: 154 PLRLIRGLAPGMLERGDGHIINVATWG--VLSEASPLFSVYNASKAALSAVSRVIETEWG 211
Query: 228 KSGIDVQC-QVPLYVATKM 245
G+ PL VAT M
Sbjct: 212 DRGVHSTTLYYPL-VATPM 229
|
Length = 293 |
| >gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 2e-25
Identities = 64/194 (32%), Positives = 100/194 (51%), Gaps = 8/194 (4%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
L+TG + GIG QL G N V+ R+P +++ ++ A +++ I + +D +
Sbjct: 1 VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELA-ALGASHSRLHI--LELDVT 57
Query: 115 GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
++ E E + E + + VLINN GI + Y EVD L + +VNV G +TQ
Sbjct: 58 DEIAESAEAVAERLGDAGLDVLINNAGILHSYGPA-SEVDSEDLLEVFQVNVLGPLLLTQ 116
Query: 175 AVLPGMLKRKKGAIVNIGSGAAIV--IPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
A LP +LK + I+NI S + S YS Y A+KA ++ ++SL VE ++ GI
Sbjct: 117 AFLPLLLKGARAKIINISSRVGSIGDNTSGGWYS-YRASKAALNMLTKSLAVELKRDGIT 175
Query: 233 VQCQVPLYVATKMA 246
V P +V T M
Sbjct: 176 VVSLHPGWVRTDMG 189
|
Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233 |
| >gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 6e-25
Identities = 65/199 (32%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVV 111
G A+VTG + GIG++ A LAK G +V+ N + +++ + I+ + V
Sbjct: 5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIA--VKA 62
Query: 112 DFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
D S D++ VE+I E +D+ L+NN GIS ++ +I VN+ G
Sbjct: 63 DVSSEEDVENLVEQIVEKFGKIDI--LVNNAGISN--FGLVTDMTDEEWDRVIDVNLTGV 118
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGS-GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
+T+ LP M+KRK G IVNI S I + LYS A+K ++ F+++L E
Sbjct: 119 MLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYS---ASKGAVNAFTKALAKELAP 175
Query: 229 SGIDVQCQVPLYVATKMAS 247
SGI V P + T+M S
Sbjct: 176 SGIRVNAVAPGAIDTEMWS 194
|
Length = 247 |
| >gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional | Back alignment and domain information |
|---|
Score = 98.7 bits (246), Expect = 3e-24
Identities = 54/199 (27%), Positives = 97/199 (48%), Gaps = 12/199 (6%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G AL+TG + GIG + A + G ++++V R+ D L D + ++ + ++ + D
Sbjct: 9 GQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAAD 68
Query: 113 FSGDLDEGVERIKEAIE----GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEG 168
S DE I + +E GL +L+NN G + A + D+ + + + N+
Sbjct: 69 VS--DDEDRRAILDWVEDHWDGLH--ILVNNAGGNIRKAAIDYTEDE--WRGIFETNLFS 122
Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
++++ P + + AIVNIGS + + + Y TKA + Q +R+L VE+ +
Sbjct: 123 AFELSRYAHPLLKQHASSAIVNIGSVSGLT--HVRSGAPYGMTKAALLQMTRNLAVEWAE 180
Query: 229 SGIDVQCQVPLYVATKMAS 247
GI V P Y+ T + S
Sbjct: 181 DGIRVNAVAPWYIRTPLTS 199
|
Length = 257 |
| >gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 98.5 bits (246), Expect = 4e-24
Identities = 57/190 (30%), Positives = 97/190 (51%), Gaps = 21/190 (11%)
Query: 57 LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
L+TG + GIG++ A LA G L+LVGRN +KL+ ++ + + + VV D +
Sbjct: 9 LLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLP---YPGRHRWVVADLT-- 63
Query: 117 LDEGVERIKEAI-EGLDVGVLINNVGISYPYARF--FHEVDQVLLKNLIKVNVEGTTKVT 173
+ G E + E + VLINN G++ F + D ++ L+ +N+ ++T
Sbjct: 64 SEAGREAVLARAREMGGINVLINNAGVN----HFALLEDQDPEAIERLLALNLTAPMQLT 119
Query: 174 QAVLPGMLKRKKGAIVNIGSG-AAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
+A+LP + + +VN+GS +I P Y+ Y A+K + FS +L E +G+
Sbjct: 120 RALLPLLRAQPSAMVVNVGSTFGSIGYPG---YASYCASKFALRGFSEALRRELADTGVR 176
Query: 233 VQCQVPLYVA 242
V LY+A
Sbjct: 177 V-----LYLA 181
|
Length = 263 |
| >gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR | Back alignment and domain information |
|---|
Score = 97.6 bits (243), Expect = 6e-24
Identities = 66/196 (33%), Positives = 98/196 (50%), Gaps = 10/196 (5%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G ALVTG + GIG++ A LA G + + R D+L+ ++D ++A+ K + + +D
Sbjct: 3 GKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKALV--LELD 60
Query: 113 FSGD--LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
+ + +D VER EA+ LD +L+NN GI + D +I N+ G
Sbjct: 61 VTDEQQVDAAVERTVEALGRLD--ILVNNAGIMLLGP--VEDADTTDWTRMIDTNLLGLM 116
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
T A LP L R KG IVNI S A V + +VY ATK ++ FS L E + G
Sbjct: 117 YTTHAALPHHLLRNKGTIVNISSVAGRV--AVRNSAVYNATKFGVNAFSEGLRQEVTERG 174
Query: 231 IDVQCQVPLYVATKMA 246
+ V P V T++
Sbjct: 175 VRVVVIEPGTVDTELR 190
|
CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243 |
| >gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 1e-23
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 26/200 (13%)
Query: 57 LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
L+TG + GIG++ A ++A+ G + LV RN + L ++ I+AK ++ D
Sbjct: 375 LITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHA------YTCD 428
Query: 117 L--DEGVERIKEAI--EGLDVGVLINNVG------ISYPYARFFHEVDQVLLKNLIKVNV 166
L V+ + I E V L+NN G + R FH+ ++ + VN
Sbjct: 429 LTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDR-FHDYERT-----MAVNY 482
Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
G ++ +LP M +R+ G +VN+ S V + P +S Y A+KA +D FS E
Sbjct: 483 FGAVRLILGLLPHMRERRFGHVVNVSS--IGVQTNAPRFSAYVASKAALDAFSDVAASET 540
Query: 227 RKSGID-VQCQVPLYVATKM 245
GI +PL V T M
Sbjct: 541 LSDGITFTTIHMPL-VRTPM 559
|
Length = 657 |
| >gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 96.2 bits (240), Expect = 2e-23
Identities = 58/196 (29%), Positives = 86/196 (43%), Gaps = 12/196 (6%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
A++TG GIG + A L K G + ++ RN + + +QA K + V D +
Sbjct: 3 AIITGGASGIGLATAKLLLKKGAKVAILDRNEN--PGAAAELQAINPKVKATFVQCDVTS 60
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
L ++ E +D +LINN GI + F + I VN+ G T
Sbjct: 61 WEQLAAAFKKAIEKFGRVD--ILINNAGILDEKSYLFAGKLPPPWEKTIDVNLTGVINTT 118
Query: 174 QAVLPGMLKRKK---GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY-RKS 229
L M K K G IVNIGS A + P + VY+A+K + F+RSL K+
Sbjct: 119 YLALHYMDKNKGGKGGVIVNIGSVAGLY--PAPQFPVYSASKHGVVGFTRSLADLLEYKT 176
Query: 230 GIDVQCQVPLYVATKM 245
G+ V P + T +
Sbjct: 177 GVRVNAICPGFTNTPL 192
|
This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244 |
| >gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 96.1 bits (240), Expect = 2e-23
Identities = 59/197 (29%), Positives = 99/197 (50%), Gaps = 17/197 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
ALVTG G+G++ A +LA+ G ++V+ R + + +++ ++++A + ++V D +
Sbjct: 9 ALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEA--LGRRAQAVQADVT 66
Query: 115 GDLDEGVERIKEAIEGL-DVGVLINNVGISYPYARFF----HEVDQVLLKNLIKVNVEGT 169
D + A+E + +L+NN GI E D+V I VN+ G
Sbjct: 67 -DKAALEAAVAAAVERFGRIDILVNNAGIF-EDKPLADMSDDEWDEV-----IDVNLSGV 119
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
+ +AV+P M K++ G IVNI S A +P P S YAA KA + +++L E +
Sbjct: 120 FHLLRAVVPPMRKQRGGRIVNISSVAG--LPGWPGRSNYAAAKAGLVGLTKALARELAEY 177
Query: 230 GIDVQCQVPLYVATKMA 246
GI V P + T M
Sbjct: 178 GITVNMVAPGDIDTDMK 194
|
Length = 249 |
| >gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 95.0 bits (237), Expect = 4e-23
Identities = 58/193 (30%), Positives = 94/193 (48%), Gaps = 10/193 (5%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
ALVTG GIG QLAK+G V++ R+ ++ + + ++A+ + + V
Sbjct: 3 ALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVRFHQLDVTDD 62
Query: 115 GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
++ + ++E GLD+ L+NN GI++ + + +K N GT VTQ
Sbjct: 63 ASIEAAADFVEEKYGGLDI--LVNNAGIAFK-GFDDSTPTREQARETMKTNFFGTVDVTQ 119
Query: 175 AVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQ 234
A+LP + K G IVN+ SG L S Y +KA ++ +R L E +++GI V
Sbjct: 120 ALLPLLKKSPAGRIVNVSSGLGS------LTSAYGVSKAALNALTRILAKELKETGIKVN 173
Query: 235 CQVPLYVATKMAS 247
P +V T M
Sbjct: 174 ACCPGWVKTDMGG 186
|
PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225 |
| >gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 95.2 bits (237), Expect = 4e-23
Identities = 54/190 (28%), Positives = 87/190 (45%), Gaps = 14/190 (7%)
Query: 57 LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
L+TG GIG + A + + G +++ GRN ++L + I + V D D
Sbjct: 9 LITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPE------IHTEVCDV-AD 61
Query: 117 LD---EGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
D E VE +K+ L+V LINN GI E + I N+ ++T
Sbjct: 62 RDSRRELVEWLKKEYPNLNV--LINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLT 119
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
+LP +L++ + I+N+ SG A V VY ATKA I ++ +L + + + ++V
Sbjct: 120 ALLLPHLLRQPEATIINVSSGLAFV--PMASTPVYCATKAAIHSYTLALREQLKDTSVEV 177
Query: 234 QCQVPLYVAT 243
P V T
Sbjct: 178 IELAPPLVDT 187
|
Length = 245 |
| >gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 94.1 bits (234), Expect = 2e-22
Identities = 60/194 (30%), Positives = 91/194 (46%), Gaps = 5/194 (2%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVV 111
G A VTG GIG+ A LA+ G ++ L R D L + ++ I+A + + V
Sbjct: 8 GQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADV 67
Query: 112 DFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
DL V R + + L + V N GI+ E +Q + ++ +N+ G
Sbjct: 68 TSKADLRAAVARTEAELGALTLAV--NAAGIANANPAEEMEEEQ--WQTVMDINLTGVFL 123
Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
QA ML+ G+IVNI S + I++ L + Y A+KA + S+SL +E+ GI
Sbjct: 124 SCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKSLAMEWVGRGI 183
Query: 232 DVQCQVPLYVATKM 245
V P Y AT M
Sbjct: 184 RVNSISPGYTATPM 197
|
Length = 254 |
| >gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Score = 94.0 bits (234), Expect = 2e-22
Identities = 51/195 (26%), Positives = 77/195 (39%), Gaps = 20/195 (10%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
ALVTG GIG + A LA G N+V+ + + + V
Sbjct: 4 ALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGSVIYLPADVTKED 63
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGI-------SYPYARFFHEVDQVLLKNLIKVNVEG 168
++ + + GLD +L+NN GI +P + +I V +
Sbjct: 64 EIADMIAAAAAEFGGLD--ILVNNAGIQHVAPIEEFPPEDW---------DRIIAVMLTS 112
Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
+A LP M K+ G I+NI S +V + P S Y A K + ++ L +E +
Sbjct: 113 AFHTIRAALPHMKKQGWGRIINIASAHGLV--ASPFKSAYVAAKHGLIGLTKVLALEVAE 170
Query: 229 SGIDVQCQVPLYVAT 243
GI V P YV T
Sbjct: 171 HGITVNAICPGYVRT 185
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255 |
| >gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR | Back alignment and domain information |
|---|
Score = 92.3 bits (230), Expect = 7e-22
Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 10/193 (5%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G ALVT + GIG + A LA+ G + + RN + L+ + ++A + +VV D
Sbjct: 1 GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRA--GGAGVLAVVAD 58
Query: 113 FS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
+ D+D VE+ +A +D+ L+NN G P F E+ + +
Sbjct: 59 LTDPEDIDRLVEKAGDAFGRVDI--LVNNAG--GPPPGPFAELTDEDWLEAFDLKLLSVI 114
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
++ +AVLPGM +R G IVNI S P L + +A + ++L E G
Sbjct: 115 RIVRAVLPGMKERGWGRIVNISSLTVKE-PEPNL-VLSNVARAGLIGLVKTLSRELAPDG 172
Query: 231 IDVQCQVPLYVAT 243
+ V +P Y+ T
Sbjct: 173 VTVNSVLPGYIDT 185
|
This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253 |
| >gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 92.0 bits (229), Expect = 7e-22
Identities = 58/198 (29%), Positives = 89/198 (44%), Gaps = 23/198 (11%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
ALVTG + GIG++ A +LA+ G ++V+ + ++V I+A K +
Sbjct: 6 ALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEAAGGK------AIAVQ 59
Query: 115 GDLD--EGVERIKEAIE----GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEG 168
D+ V R+ +A E G+D+ L+NN G+ + E + + VN +G
Sbjct: 60 ADVSDPSQVARLFDAAEKAFGGVDI--LVNNAGVMLK--KPIAETSEEEFDRMFTVNTKG 115
Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGA-AIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
V Q + R G I+NI S A P+ Y YA +KA ++ F+R L E
Sbjct: 116 AFFVLQEAAKRL--RDGGRIINISSSLTAAYTPN---YGAYAGSKAAVEAFTRVLAKELG 170
Query: 228 KSGIDVQCQVPLYVATKM 245
GI V P V T M
Sbjct: 171 GRGITVNAVAPGPVDTDM 188
|
1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243 |
| >gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 90.9 bits (226), Expect = 3e-21
Identities = 53/221 (23%), Positives = 88/221 (39%), Gaps = 22/221 (9%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
LVTG GIG++ A A+ G + + + L + A+ ++ + V D +
Sbjct: 14 VLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAAL----AATAARLPGAKVTATVADVAD 69
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
++ + E GLD VL+NN GI+ P E+ + + VN+ G
Sbjct: 70 PAQVERVFDTAVERFGGLD--VLVNNAGIAGPTGG-IDEITPEQWEQTLAVNLNGQFYFA 126
Query: 174 QAVLPGMLKRKKG-AIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
+A +P + G I+ + S A + P + YAA+K + +SL +E GI
Sbjct: 127 RAAVPLLKASGHGGVIIALSSVAGRL--GYPGRTPYAASKWAVVGLVKSLAIELGPLGIR 184
Query: 233 VQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEP 273
V +P V + ARA IG +
Sbjct: 185 VNAILPGIVRGPRM----------RRVIEARAQQLGIGLDE 215
|
Length = 264 |
| >gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 89.8 bits (223), Expect = 4e-21
Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 24/199 (12%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G AL+T GIG++ A A+ G N++ N +KLK++ I + V+D
Sbjct: 2 GKVALITAAAQGIGRAIALAFAREGANVIATDINEEKLKELE-------RGPGITTRVLD 54
Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFH-----EVDQVLLKNLIKVNVE 167
+ E V + + +DV L N G F H + + + +NV
Sbjct: 55 VTDK--EQVAALAKEEGRIDV--LFNCAG-------FVHHGSILDCEDDDWDFAMNLNVR 103
Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
+ +AVLP ML RK G+I+N+ S A+ I P VY+ TKA + ++S+ ++
Sbjct: 104 SMYLMIKAVLPKMLARKDGSIINMSSVAS-SIKGVPNRFVYSTTKAAVIGLTKSVAADFA 162
Query: 228 KSGIDVQCQVPLYVATKMA 246
+ GI P V T
Sbjct: 163 QQGIRCNAICPGTVDTPSL 181
|
Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241 |
| >gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Score = 89.8 bits (223), Expect = 5e-21
Identities = 56/196 (28%), Positives = 87/196 (44%), Gaps = 13/196 (6%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKT--QIKSVVVDF 113
ALVTG GIG + A +L G ++ + D + +Y T Q++ +D
Sbjct: 5 ALVTGAKRGIGSAIARELLNDGYRVIATYFSG---NDCAKDWFEEYGFTEDQVRLKELDV 61
Query: 114 SGDLDEGVERIKEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
+ D +E E + E E V +L+NN GI+ F + ++I N+ V
Sbjct: 62 T-DTEECAEALAEIEEEEGPVDILVNNAGITRDSV--FKRMSHQEWNDVINTNLNSVFNV 118
Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIV-IPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
TQ + M ++ G I+NI S + YS A KA + F+++L E + GI
Sbjct: 119 TQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYS---AAKAGMIGFTKALASEGARYGI 175
Query: 232 DVQCQVPLYVATKMAS 247
V C P Y+AT M
Sbjct: 176 TVNCIAPGYIATPMVE 191
|
Length = 245 |
| >gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 89.6 bits (223), Expect = 6e-21
Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 21/217 (9%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
ALVTG G+G +FA LA+ G + + ++++ +++A A + ++ D +
Sbjct: 10 ALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEA--AGGRAHAIAADLAD 67
Query: 116 DLDEGVERIKEAIE----GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
V+R +A GLD L+NN GI+ ++ E+D ++ VNV GT
Sbjct: 68 P--ASVQRFFDAAAAALGGLDG--LVNNAGITN--SKSATELDIDTWDAVMNVNVRGTFL 121
Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
+ +A LP + +G IVN+ S A+ P Y A+K + +RSL E GI
Sbjct: 122 MLRAALPHLRDSGRGRIVNLASDTALW--GAPKLGAYVASKGAVIGMTRSLARELGGRGI 179
Query: 232 DVQCQVPLYVATKMASIKRSSFFVPSTDVYAR-AAMR 267
V P AT+ + +VP+ + +A R
Sbjct: 180 TVNAIAPGLTATEA------TAYVPADERHAYYLKGR 210
|
Length = 250 |
| >gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12 | Back alignment and domain information |
|---|
Score = 88.3 bits (219), Expect = 2e-20
Identities = 56/195 (28%), Positives = 86/195 (44%), Gaps = 12/195 (6%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G A+VTG GIG + A +LA+ G +V+ + + V I ++ VD
Sbjct: 3 GKVAIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQIAGGAL-----ALRVD 57
Query: 113 FSG--DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
+ + ER E GLD+ L+NN G + + D + + +N+ GT
Sbjct: 58 VTDEQQVAALFERAVEEFGGLDL--LVNNAGAMH-LTPAIIDTDLAVWDQTMAINLRGTF 114
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
+ P M+ R G+IVN+ S A DP Y Y A+KA I +R+L E R +G
Sbjct: 115 LCCRHAAPRMIARGGGSIVNLSSIAGQS--GDPGYGAYGASKAAIRNLTRTLAAELRHAG 172
Query: 231 IDVQCQVPLYVATKM 245
I P + T +
Sbjct: 173 IRCNALAPGLIDTPL 187
|
These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246 |
| >gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 91.4 bits (227), Expect = 2e-20
Identities = 62/206 (30%), Positives = 106/206 (51%), Gaps = 13/206 (6%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
LVTG GIG++ + A+ G +V+ RN ++ ++ +DS+ + ++ +D S
Sbjct: 8 VLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDH-----HALAMDVSD 62
Query: 116 DLD--EGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
+ EG E++ +DV L+NN G++ P + L +N+ G V
Sbjct: 63 EAQIREGFEQLHREFGRIDV--LVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVA 120
Query: 174 QAVLPGMLKRKKG-AIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
+ L M+++ G AIVN+ SGA +V + P + Y+A+KA + +RSL E+ GI
Sbjct: 121 REALRLMIEQGHGAAIVNVASGAGLV--ALPKRTAYSASKAAVISLTRSLACEWAAKGIR 178
Query: 233 VQCQVPLYVATKM-ASIKRSSFFVPS 257
V +P YV T+M A ++R+ PS
Sbjct: 179 VNAVLPGYVRTQMVAELERAGKLDPS 204
|
Length = 520 |
| >gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 87.9 bits (218), Expect = 2e-20
Identities = 61/200 (30%), Positives = 91/200 (45%), Gaps = 15/200 (7%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G ALVTG GIG++ LAK G +V V R L DS+ + I+ V VD
Sbjct: 7 GKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADL----DSLVRE--CPGIEPVCVD 60
Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
S + E ++ +D +L+NN ++ F EV + VNV V
Sbjct: 61 LSD--WDATEEALGSVGPVD--LLVNNAAVAILQP--FLEVTKEAFDRSFDVNVRAVIHV 114
Query: 173 TQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
+Q V GM+ R G+IVN+ S A+ ++ ++VY +TKA +D ++ + +E I
Sbjct: 115 SQIVARGMIARGVPGSIVNVSSQASQRALTN--HTVYCSTKAALDMLTKVMALELGPHKI 172
Query: 232 DVQCQVPLYVATKMASIKRS 251
V P V T M S
Sbjct: 173 RVNSVNPTVVMTDMGRDNWS 192
|
Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244 |
| >gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8 | Back alignment and domain information |
|---|
Score = 87.8 bits (218), Expect = 3e-20
Identities = 53/197 (26%), Positives = 83/197 (42%), Gaps = 20/197 (10%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
L+TG IGK+F L G L+L N L+ + + + Y K ++ ++ +D
Sbjct: 5 ILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLY-KNRVIALELDI-- 61
Query: 116 DLDEGVERIKEAIEGLD-----VGVLINNVGIS-YPYARFFHEVDQVLLKNLIKVNVEGT 169
E IKE IE + +LINN S + F E ++ VN+ G
Sbjct: 62 ---TSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGA 118
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS--------VYAATKAYIDQFSRS 221
+QA + K+ KG+I+NI S ++ P +Y Y+ KA I ++
Sbjct: 119 FLCSQAFIKLFKKQGKGSIINIASIYGVIAPDFRIYENTQMYSPVEYSVIKAGIIHLTKY 178
Query: 222 LYVEYRKSGIDVQCQVP 238
L Y +GI V P
Sbjct: 179 LAKYYADTGIRVNAISP 195
|
This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 87.5 bits (217), Expect = 4e-20
Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 22/198 (11%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
L+TG GIG A LA+ G +++ ++ + ++ + K V
Sbjct: 12 ILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQ 71
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGIS--YPYARF-FHEVDQVLLKNLIKVNVEGTTKV 172
+++ +E I++ I +D VLINN GI +P+ F E + V I VN V
Sbjct: 72 EVEAAIEHIEKDIGPID--VLINNAGIQRRHPFTEFPEQEWNDV-----IAVNQTAVFLV 124
Query: 173 TQAVLPGMLKRKKGAIVNIGS-----GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
+QAV M+KR+ G I+NI S G + P YAA+K + +R + VE
Sbjct: 125 SQAVARYMVKRQAGKIINICSMQSELGRDTITP-------YAASKGAVKMLTRGMCVELA 177
Query: 228 KSGIDVQCQVPLYVATKM 245
+ I V P Y T+M
Sbjct: 178 RHNIQVNGIAPGYFKTEM 195
|
Length = 254 |
| >gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 87.0 bits (216), Expect = 7e-20
Identities = 61/191 (31%), Positives = 96/191 (50%), Gaps = 12/191 (6%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
++TG ++GIG++ A +LA+ G LVL RN +L ++ + + V D S
Sbjct: 4 VIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELAD--HGGEALVVPTDVS- 60
Query: 116 DLDEGVERIKEAIE---GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
D + I+ A+ G+D +L+NN GI+ ++RF D + + +++VN G
Sbjct: 61 DAEACERLIEAAVARFGGID--ILVNNAGITM-WSRFDELTDLSVFERVMRVNYLGAVYC 117
Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
T A LP LK +G IV + S A + P S YAA+K + F SL +E G+
Sbjct: 118 THAALPH-LKASRGQIVVVSSLAG--LTGVPTRSGYAASKHALHGFFDSLRIELADDGVA 174
Query: 233 VQCQVPLYVAT 243
V P +VAT
Sbjct: 175 VTVVCPGFVAT 185
|
Length = 263 |
| >gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 86.3 bits (214), Expect = 9e-20
Identities = 58/227 (25%), Positives = 97/227 (42%), Gaps = 19/227 (8%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G ALVTG T GIG + +LA G + RN +L + + K +++ V D
Sbjct: 6 GKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREK--GFKVEGSVCD 63
Query: 113 FSGDLDEGVERIKEAIE---GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
S + + + + G + +L+NN G + + + ++ N E
Sbjct: 64 VS--SRSERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYTEED--YSLIMSTNFEAA 119
Query: 170 TKVTQAVLPGMLKR-KKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
+++ P +LK G IV I S A ++ + P + Y ATK ++Q +RSL E+ K
Sbjct: 120 YHLSRLAHP-LLKASGNGNIVFISSVAGVI--AVPSGAPYGATKGALNQLTRSLACEWAK 176
Query: 229 SGIDVQCQVPLYVATKMAS--IKRSSFFVPSTDVYARAAMRWIGYEP 273
I V P +AT + I++ V R ++ G EP
Sbjct: 177 DNIRVNAVAPWVIATPLVEPVIQQKENL---DKVIERTPLKRFG-EP 219
|
This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251 |
| >gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 87.0 bits (216), Expect = 1e-19
Identities = 56/179 (31%), Positives = 88/179 (49%), Gaps = 7/179 (3%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
A+VTG + G G +LAK G ++ RNP+K +++ + IK +D +
Sbjct: 6 AIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTD 65
Query: 116 DLDEGVERIKEAIEGLD-VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
+ + ++ + + +L+NN G Y F E+ + + NV G VTQ
Sbjct: 66 Q--NSIHNFQLVLKEIGRIDLLVNNAG--YANGGFVEEIPVEEYRKQFETNVFGAISVTQ 121
Query: 175 AVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
AVLP M K+K G I+NI S + V P S Y ++K ++ FS SL +E + GIDV
Sbjct: 122 AVLPYMRKQKSGKIINISSISGRVGF--PGLSPYVSSKYALEGFSESLRLELKPFGIDV 178
|
Length = 280 |
| >gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 85.0 bits (211), Expect = 4e-19
Identities = 54/194 (27%), Positives = 87/194 (44%), Gaps = 18/194 (9%)
Query: 58 VTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI-QAKYAKTQIKSVVVD---F 113
+TG GIG + A LA G + + + K+ + + V D F
Sbjct: 10 ITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLD----VTDPASF 65
Query: 114 SGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
+ LD VE + + VL+NN G+ P F E D V + L VNV G +
Sbjct: 66 AAFLDA-VEA-----DLGPIDVLVNNAGV-MPVGPFLDEPDAVTRRIL-DVNVYGVILGS 117
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
+ P M+ R +G +VN+ S A IP P + Y A+K + F+ + +E R +G+ V
Sbjct: 118 KLAAPRMVPRGRGHVVNVAS-LAGKIPV-PGMATYCASKHAVVGFTDAARLELRGTGVHV 175
Query: 234 QCQVPLYVATKMAS 247
+P +V T++ +
Sbjct: 176 SVVLPSFVNTELIA 189
|
Length = 273 |
| >gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 83.8 bits (207), Expect = 1e-18
Identities = 52/199 (26%), Positives = 88/199 (44%), Gaps = 21/199 (10%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G A+VTG GIGK A +LA+ G + + N D V+D I K ++ V
Sbjct: 7 GKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVT 66
Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGI-------SYPYARFFHEVDQVLLKNLIKVN 165
++ G++++ E +D +L++N GI +Y +A + K + ++
Sbjct: 67 NEDAVNAGIDKVAERFGSVD--ILVSNAGIQIVNPIENYSFADW---------KKMQAIH 115
Query: 166 VEGTTKVTQAVLPGMLK-RKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYV 224
V+G T+A L M K + G ++ +GS + + PL S Y K + +R L
Sbjct: 116 VDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHE--ASPLKSAYVTAKHGLLGLARVLAK 173
Query: 225 EYRKSGIDVQCQVPLYVAT 243
E K + P +V T
Sbjct: 174 EGAKHNVRSHVVCPGFVRT 192
|
Length = 262 |
| >gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 83.5 bits (207), Expect = 1e-18
Identities = 48/194 (24%), Positives = 93/194 (47%), Gaps = 5/194 (2%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYA-KTQIKSVVVDFS 114
A+VTG + GIG + A LA+ G ++ ++ + + ++ ++ + KY KT+ V
Sbjct: 11 AIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYKCDVSSQ 70
Query: 115 GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
+++ ++I++ +D+ LI N GI+ + +Q +I VN+ G Q
Sbjct: 71 ESVEKTFKQIQKDFGKIDI--LIANAGITVHKPALDYTYEQW--NKVIDVNLNGVFNCAQ 126
Query: 175 AVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQ 234
A K+ KG+++ S + ++ + Y A+KA + ++SL VE+ K I V
Sbjct: 127 AAAKIFKKQGKGSLIITASMSGTIVNRPQPQAAYNASKAAVIHLAKSLAVEWAKYFIRVN 186
Query: 235 CQVPLYVATKMASI 248
P Y+ T +
Sbjct: 187 SISPGYIDTDLTDF 200
|
NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252 |
| >gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 83.4 bits (207), Expect = 1e-18
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 24/197 (12%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
ALVTG GIG A LAK G +V+ N + ++++Q K V +D +
Sbjct: 7 ALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGK--AIGVAMDVTD 64
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGI-------SYPYARFFHEVDQVLLKNLIKVNV 166
++ G++ E G+D +L+NN GI +P ++ K +I + +
Sbjct: 65 EEAINAGIDYAVETFGGVD--ILVNNAGIQHVAPIEDFPTEKW---------KKMIAIML 113
Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
+G T+A LP M + G I+N+ S +V + Y + K + ++ + +E
Sbjct: 114 DGAFLTTKAALPIMKAQGGGRIINMASVHGLV--GSAGKAAYVSAKHGLIGLTKVVALEG 171
Query: 227 RKSGIDVQCQVPLYVAT 243
G+ V P YV T
Sbjct: 172 ATHGVTVNAICPGYVDT 188
|
Length = 258 |
| >gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Score = 83.0 bits (205), Expect = 1e-18
Identities = 59/183 (32%), Positives = 93/183 (50%), Gaps = 6/183 (3%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
A+VTG GIG + + A+ G + + N + + V+ I+AK Q + +
Sbjct: 6 AIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRD 65
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
+D V ++A+ +DV L+NN G + F + + L + LI +N+ G + A
Sbjct: 66 SVDTAVAAAEQALGPVDV--LVNNAG--WDKFGPFTKTEPPLWERLIAINLTGALHMHHA 121
Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
VLPGM++R G IVNI S AA V S +VYAA K + FS+++ E+ + GI V
Sbjct: 122 VLPGMVERGAGRIVNIASDAARVGSSGE--AVYAACKGGLVAFSKTMAREHARHGITVNV 179
Query: 236 QVP 238
P
Sbjct: 180 VCP 182
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250 |
| >gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | Back alignment and domain information |
|---|
Score = 83.1 bits (206), Expect = 1e-18
Identities = 57/183 (31%), Positives = 84/183 (45%), Gaps = 20/183 (10%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
LVTG GIG + A LA+ G + V RN ++L ++ ++ + V S
Sbjct: 1 VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFATYKLDVADSA 60
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGI-------SYPYARFFHEVDQVLLKNLIKVNVEG 168
+DE V+R++ +DV L+N GI S + VN G
Sbjct: 61 AVDEVVQRLEREYGPIDV--LVNVAGILRLGAIDSLS----DEDWQATF-----AVNTFG 109
Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
V+QAV P M +R+ GAIV +GS AA V P + YAA+KA + ++ L +E
Sbjct: 110 VFNVSQAVSPRMKRRRSGAIVTVGSNAANV-PR-MGMAAYAASKAALTMLTKCLGLELAP 167
Query: 229 SGI 231
GI
Sbjct: 168 YGI 170
|
Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250 |
| >gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 83.0 bits (206), Expect = 2e-18
Identities = 55/208 (26%), Positives = 86/208 (41%), Gaps = 22/208 (10%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G ++TG GIGK A +LAK G ++++ RN +K ++ + I+ + +++ + +D
Sbjct: 1 GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLD 60
Query: 113 FSGDLD---EGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
S L + E LD +LINN GI P D + VN G
Sbjct: 61 LS-SLASVRQFAEEFLARFPRLD--ILINNAGIMAP--PRRLTKDG--FELQFAVNYLGH 113
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD---------PLYS---VYAATKAYIDQ 217
+T +LP + IVN+ S A P D YS Y +K
Sbjct: 114 FLLTNLLLPVLKASAPSRIVNVSSIAHRAGPIDFNDLDLENNKEYSPYKAYGQSKLANIL 173
Query: 218 FSRSLYVEYRKSGIDVQCQVPLYVATKM 245
F+R L +G+ V P V T++
Sbjct: 174 FTRELARRLEGTGVTVNALHPGVVRTEL 201
|
Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269 |
| >gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 83.5 bits (207), Expect = 2e-18
Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 8/178 (4%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
+VTG GIG A +L G L LV +L ++ + + + V D +
Sbjct: 12 VVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAA 71
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
+ E E G+D V++ N GI+ VD + +I VN+ G +A
Sbjct: 72 -MQAAAEEAVERFGGID--VVVANAGIA-SGGSVAQ-VDPDAFRRVIDVNLLGVFHTVRA 126
Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
LP +++R +G ++ + S AA + P + Y A+KA ++ F+ +L +E G+ V
Sbjct: 127 TLPALIER-RGYVLQVSSLAAFA--AAPGMAAYCASKAGVEAFANALRLEVAHHGVTV 181
|
Length = 296 |
| >gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 81.7 bits (202), Expect = 5e-18
Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 16/202 (7%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G ALVTG + G+G FA LA+ G +VL R ++LK++ I+A+ + S+ V
Sbjct: 9 GKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVT 68
Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
+ V + +D +L+NN G+S + +V + N G V
Sbjct: 69 DYQSIKAAVAHAETEAGTID--ILVNNSGVS--TTQKLVDVTPADFDFVFDTNTRGAFFV 124
Query: 173 TQAVLPGMLKRKKGA--------IVNIGSGAAI-VIPSDPLYSVYAATKAYIDQFSRSLY 223
Q V M+ R KGA I+NI S A + V+P +Y +KA + +R++
Sbjct: 125 AQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQ---IGLYCMSKAAVVHMTRAMA 181
Query: 224 VEYRKSGIDVQCQVPLYVATKM 245
+E+ + GI+V P Y+ T++
Sbjct: 182 LEWGRHGINVNAICPGYIDTEI 203
|
Length = 258 |
| >gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Score = 81.3 bits (201), Expect = 5e-18
Identities = 55/200 (27%), Positives = 82/200 (41%), Gaps = 25/200 (12%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
ALVTG GIG + +LAK G + G N ++ + A + V D S
Sbjct: 3 ALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGAL--GFDFRVVEGDVS 60
Query: 115 GDLDEGVERIKEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
+ + + L + VL+NN GI+ F ++ +I N+ VT
Sbjct: 61 -SFESCKAAVAKVEAELGPIDVLVNNAGITRD--ATFKKMTYEQWSAVIDTNLNSVFNVT 117
Query: 174 QAVLPGMLKRKKGAIVNIGS--------GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
Q V+ GM +R G I+NI S G Y+A KA + F+++L E
Sbjct: 118 QPVIDGMRERGWGRIINISSVNGQKGQFGQT----------NYSAAKAGMIGFTKALAQE 167
Query: 226 YRKSGIDVQCQVPLYVATKM 245
G+ V P Y+AT M
Sbjct: 168 GATKGVTVNTISPGYIATDM 187
|
This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242 |
| >gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7 | Back alignment and domain information |
|---|
Score = 81.3 bits (201), Expect = 5e-18
Identities = 55/197 (27%), Positives = 82/197 (41%), Gaps = 15/197 (7%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVV 111
LVTG GIGK+F L G V R+P + K + + +
Sbjct: 3 DKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAHLVAKYGDK-----VVPLRL 57
Query: 112 DFSGDLDEGVERIKEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
D + E IK A DV V+INN G+ P + L + + VNV G
Sbjct: 58 DVTD-----PESIKAAAAQAKDVDVVINNAGVLKPATLLEEGALEALKQEM-DVNVFGLL 111
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
++ QA P + GAIVN+ S A++ + P Y+A+K+ ++ L E G
Sbjct: 112 RLAQAFAPVLKANGGGAIVNLNSVASLK--NFPAMGTYSASKSAAYSLTQGLRAELAAQG 169
Query: 231 IDVQCQVPLYVATKMAS 247
V P + T+MA+
Sbjct: 170 TLVLSVHPGPIDTRMAA 186
|
These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235 |
| >gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 81.3 bits (201), Expect = 6e-18
Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 15/194 (7%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
A+VTG G+G + A L G +VL ++ + + + + +D +
Sbjct: 8 AIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAEL-----GDAARFFHLDVTD 62
Query: 116 DLD--EGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
+ V+ +EA LDV L+NN GI + L+ +N+ G T
Sbjct: 63 EDGWTAVVDTAREAFGRLDV--LVNNAGILTG--GTVETTTLEEWRRLLDINLTGVFLGT 118
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
+AV+P M + G+I+N+ S +V DP + Y A+K + ++S +E G +
Sbjct: 119 RAVIPPMKEAGGGSIINMSSIEGLV--GDPALAAYNASKGAVRGLTKSAALECATQGYGI 176
Query: 234 QCQV--PLYVATKM 245
+ P Y+ T M
Sbjct: 177 RVNSVHPGYIYTPM 190
|
This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247 |
| >gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 81.0 bits (200), Expect = 7e-18
Identities = 54/198 (27%), Positives = 84/198 (42%), Gaps = 11/198 (5%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
ALVTG + GIG + A L + G+ +V R DK++ ++ Q+ + D S
Sbjct: 9 ALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSA-GYPTLFPYQCDLSN 67
Query: 116 --DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
+ I+ +G+D V INN G++ P K + VNV + T
Sbjct: 68 EEQILSMFSAIRTQHQGVD--VCINNAGLARP--EPLLSGKTEGWKEMFDVNVLALSICT 123
Query: 174 QAVLPGMLKRK--KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR--KS 229
+ M +R G I+NI S + +P ++ YAATK + + L E R K+
Sbjct: 124 REAYQSMKERNVDDGHIININSMSGHRVPPVSVFHFYAATKHAVTALTEGLRQELREAKT 183
Query: 230 GIDVQCQVPLYVATKMAS 247
I P V T+ A
Sbjct: 184 HIRATSISPGLVETEFAF 201
|
Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 81.1 bits (201), Expect = 1e-17
Identities = 62/196 (31%), Positives = 95/196 (48%), Gaps = 26/196 (13%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
ALVTG + GIG++ A +LA+ G + RNP + ++ + +D +
Sbjct: 7 ALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAA----------PIPGVELLELDVTD 56
Query: 116 DLDEGVER-IKEAI--EG-LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
D V+ + E I G +DV L+NN G+ A + Q + L NV G +
Sbjct: 57 D--ASVQAAVDEVIARAGRIDV--LVNNAGVGLAGAAEESSIAQA--QALFDTNVFGILR 110
Query: 172 VTQAVLPGMLKRKKGAIVNIGS--GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
+T+AVLP M + G I+NI S G +P+ P ++YAA+K ++ +S SL E R+
Sbjct: 111 MTRAVLPHMRAQGSGRIINISSVLG---FLPA-PYMALYAASKHAVEGYSESLDHEVRQF 166
Query: 230 GIDVQCQVPLYVATKM 245
GI V P Y T
Sbjct: 167 GIRVSLVEPAYTKTNF 182
|
Length = 270 |
| >gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs | Back alignment and domain information |
|---|
Score = 80.4 bits (199), Expect = 1e-17
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 31/205 (15%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVL---------VGRNPDKLKDVSDSIQAKYAKTQI 106
LVTG G+G+++A A+ G +V+ G++ V D I+A K
Sbjct: 8 VLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAAGGKA-- 65
Query: 107 KSVVVDFSGDLDEGVERIKEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVN 165
V +++G + +K AI+ V +L+NN GI R F ++ + +++V+
Sbjct: 66 ----VANYDSVEDGEKIVKTAIDAFGRVDILVNNAGILRD--RSFAKMSEEDWDLVMRVH 119
Query: 166 VEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY-----SVYAATKAYIDQFSR 220
++G+ KVT+A P M K+K G I+N S A + Y + Y+A K + S
Sbjct: 120 LKGSFKVTRAAWPYMRKQKFGRIINTSSAAGL-------YGNFGQANYSAAKLGLLGLSN 172
Query: 221 SLYVEYRKSGIDVQCQVPLYVATKM 245
+L +E K I P ++M
Sbjct: 173 TLAIEGAKYNITCNTIAPA-AGSRM 196
|
Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250 |
| >gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 80.6 bits (199), Expect = 1e-17
Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 12/194 (6%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G ALVTG + GIG + A LA+ G ++L GR+P KL ++S++ + + V
Sbjct: 10 GRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVT 69
Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARFFHEVDQVLLKNLIKVNVEGTT 170
+ ++ + I +D +L+NN G+ + P F + + LL+ N+
Sbjct: 70 DHDAVRAAIDAFEAEIGPID--ILVNNAGMQFRTPLEDFPADAFERLLRT----NISSVF 123
Query: 171 KVTQAVLPGMLKRKKGAIVNIGS-GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
V QAV M+ R G I+NI S +A+ P + Y ATK + ++ + ++ K
Sbjct: 124 YVGQAVARHMIARGAGKIINIASVQSALARPG---IAPYTATKGAVGNLTKGMATDWAKH 180
Query: 230 GIDVQCQVPLYVAT 243
G+ P Y T
Sbjct: 181 GLQCNAIAPGYFDT 194
|
Length = 255 |
| >gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 80.6 bits (199), Expect = 1e-17
Identities = 65/223 (29%), Positives = 98/223 (43%), Gaps = 16/223 (7%)
Query: 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVV 111
G ALVTG GIG++ A A+ G +V+ R+ ++ I+ + + V
Sbjct: 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDV 65
Query: 112 DFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFH----EVDQVLLKNLIKVNVE 167
++ VE+ A LD NN GI R E D + + VNV+
Sbjct: 66 TRDAEVKALVEQTIAAYGRLDYA--FNNAGIEIEQGRLAEGSEAEFDAI-----MGVNVK 118
Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
G + +P ML + GAIVN S A + + P S+YAA+K + ++S +EY
Sbjct: 119 GVWLCMKYQIPLMLAQGGGAIVNTASVAGLG--AAPKMSIYAASKHAVIGLTKSAAIEYA 176
Query: 228 KSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIG 270
K GI V P + T M +R+ P +A AAM +G
Sbjct: 177 KKGIRVNAVCPAVIDTDM--FRRAYEADPRKAEFA-AAMHPVG 216
|
Length = 253 |
| >gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 80.7 bits (200), Expect = 1e-17
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 29/197 (14%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
A++TG +G + A +LA+ G + ++ RN +K + V I+A A + +V D
Sbjct: 13 AVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKA--AGGEALAVKADV-- 68
Query: 116 DLDEG-VERIKEAIEGLDVG---VLINNVGISYPYARFFHEVDQVL--LKNLIKVNVEGT 169
LD+ +E+ ++ I D G +LIN G ++P A +E +++ K ++ EG
Sbjct: 69 -LDKESLEQARQQILE-DFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGF 126
Query: 170 TKV-----------TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV--YAATKAYID 216
V TQ M+ RK G I+NI S A PL V Y+A KA I
Sbjct: 127 EFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFT----PLTKVPAYSAAKAAIS 182
Query: 217 QFSRSLYVEYRKSGIDV 233
F++ L V + K GI V
Sbjct: 183 NFTQWLAVHFAKVGIRV 199
|
Length = 278 |
| >gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR | Back alignment and domain information |
|---|
Score = 80.3 bits (199), Expect = 1e-17
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 18/190 (9%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
A +TG GIGK+ A A+ G ++ + GR P+ L+ ++ I + + D
Sbjct: 6 AFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEIS-SATGGRAHPIQCDVR- 63
Query: 116 DLDEGVERIKEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
D + + E ++ + +LINN ++ + K +I +++ GT T+
Sbjct: 64 DPEAVEAAVDETLKEFGKIDILINNAAGNFLAP--AESLSPNGFKTVIDIDLNGTFNTTK 121
Query: 175 AVLPGMLKRKKGA-IVNIG-----SGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
AV +++ K G I+NI +G+ + S AA KA +D +RSL VE+
Sbjct: 122 AVGKRLIEAKHGGSILNISATYAYTGSPFQVHS-------AAAKAGVDALTRSLAVEWGP 174
Query: 229 SGIDVQCQVP 238
GI V P
Sbjct: 175 YGIRVNAIAP 184
|
TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249 |
| >gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 80.2 bits (198), Expect = 2e-17
Identities = 55/191 (28%), Positives = 83/191 (43%), Gaps = 9/191 (4%)
Query: 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDF 113
ALVTG GIG++ A + G ++ + + L +D++ + V D
Sbjct: 3 RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDA----RFVPVACDL 58
Query: 114 SGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
+ A E V VL+ N G + A H+ + +N+E
Sbjct: 59 TDAASLAAALANAAAERGPVDVLVANAGAAR--AASLHDTTPASWRADNALNLEAAYLCV 116
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
+AVL GMLKR +GA+VNIGS + P YS A KA + +++ L VEY + GI
Sbjct: 117 EAVLEGMLKRSRGAVVNIGSVNGMAALGHPAYS---AAKAGLIHYTKLLAVEYGRFGIRA 173
Query: 234 QCQVPLYVATK 244
P V T+
Sbjct: 174 NAVAPGTVKTQ 184
|
Length = 257 |
| >gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 79.2 bits (196), Expect = 3e-17
Identities = 53/197 (26%), Positives = 84/197 (42%), Gaps = 19/197 (9%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVV 111
G LVTG GIG++F QL G V R+P+ + D+ + + +
Sbjct: 6 GKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTDLGPRVVP---------LQL 56
Query: 112 DFSGDLDEGVERIKEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
D + + A E DV +L+NN GI + E D+ L+ ++ N G
Sbjct: 57 DVTDP-----ASVAAAAEAASDVTILVNNAGIFRTGS-LLLEGDEDALRAEMETNYFGPL 110
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
+ +A P + GAIVN+ S + V + P Y+A+KA +++L E G
Sbjct: 111 AMARAFAPVLAANGGGAIVNVLSVLSWV--NFPNLGTYSASKAAAWSLTQALRAELAPQG 168
Query: 231 IDVQCQVPLYVATKMAS 247
V P + T MA+
Sbjct: 169 TRVLGVHPGPIDTDMAA 185
|
Length = 238 |
| >gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Score = 79.4 bits (196), Expect = 3e-17
Identities = 54/172 (31%), Positives = 87/172 (50%), Gaps = 20/172 (11%)
Query: 57 LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
LVTG T G G+ + + G ++ GR ++L+++ D + Q+ V
Sbjct: 4 LVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLD---VRNRAA 60
Query: 117 LDEGVERIKEAIEGLDVGVLINNVGISY---PYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
++E + + +DV L+NN G++ P H+ + +I N +G +T
Sbjct: 61 IEEMLASLPAEWRNIDV--LVNNAGLALGLEPA----HKASVEDWETMIDTNNKGLVYMT 114
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS---VYAATKAYIDQFSRSL 222
+AVLPGM++R G I+NIGS A S P Y+ VY ATKA++ QFS +L
Sbjct: 115 RAVLPGMVERNHGHIINIGSTAG----SWP-YAGGNVYGATKAFVRQFSLNL 161
|
Length = 248 |
| >gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 80.4 bits (199), Expect = 3e-17
Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 12/182 (6%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
++TG + G+G++ A A+ G +VL+ R + L+ ++ I+A + VV D +
Sbjct: 11 VVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALA--VVADVAD 68
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
+ +R +E + +D V NN ++ + F +V + + +V G T
Sbjct: 69 AEAVQAAADRAEEELGPIDTWV--NNAMVTV-FGP-FEDVTPEEFRRVTEVTYLGVVHGT 124
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE--YRKSGI 231
A L M R +GAI+ +GS A S PL S Y A K I F+ SL E + S +
Sbjct: 125 LAALRHMRPRDRGAIIQVGSALAYR--SIPLQSAYCAAKHAIRGFTDSLRCELLHDGSPV 182
Query: 232 DV 233
V
Sbjct: 183 SV 184
|
Length = 334 |
| >gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 79.3 bits (196), Expect = 3e-17
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSV 109
R G ALVTG GIG + A A+ G + L + + + +I A ++ +V
Sbjct: 4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAV 63
Query: 110 VVDFS--GDLDEGVERIKEAIEGLDVGVLINNVGI---SYP-------YARFFHEVDQVL 157
D + + V +EA LDV L+NN GI + P + R F
Sbjct: 64 PADVTDAASVAAAVAAAEEAFGPLDV--LVNNAGINVFADPLAMTDEDWRRCF------- 114
Query: 158 LKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAI-VIPSDPLYSVYAATKAYID 216
V+++G +AVLPGM++R +G+IVNI S A +IP Y V A +
Sbjct: 115 -----AVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPV--AKHGLLG 167
Query: 217 QFSRSLYVEYRKSGIDVQCQVPLYVATKMA 246
+R+L +EY + V P Y+ T++
Sbjct: 168 -LTRALGIEYAARNVRVNAIAPGYIETQLT 196
|
Length = 260 |
| >gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 78.6 bits (194), Expect = 3e-17
Identities = 52/195 (26%), Positives = 88/195 (45%), Gaps = 16/195 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
ALVTG + GIG A LA+ G + L RNP+ L + +++V D
Sbjct: 3 ALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLA------ALSASGGDVEAVPYDARD 56
Query: 116 DLDEG--VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
D V+ +++ +D VL++N GI P E L+ +NV ++T
Sbjct: 57 PEDARALVDALRDRFGRID--VLVHNAGIGRPTT--LREGSDAELEAHFSINVIAPAELT 112
Query: 174 QAVLPGMLKRKKGAIVNIGSGAA-IVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
+A+LP + + G +V + S + V+ + + Y+A+K + + +L E G+
Sbjct: 113 RALLPALREAGSGRVVFLNSLSGKRVLAGN---AGYSASKFALRALAHALRQEGWDHGVR 169
Query: 233 VQCQVPLYVATKMAS 247
V P +V T MA
Sbjct: 170 VSAVCPGFVDTPMAQ 184
|
This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223 |
| >gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR | Back alignment and domain information |
|---|
Score = 79.1 bits (195), Expect = 4e-17
Identities = 61/202 (30%), Positives = 100/202 (49%), Gaps = 12/202 (5%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
ALVTG T GIG + A +L K GL + + R + L ++ + ++ V
Sbjct: 6 ALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGVEADGRTCDVRSVP 65
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
+++ V +D VL+NN G S A E+ L ++++ N+ G +VT+
Sbjct: 66 EIEALVAAAVARYGPID--VLVNNAGRSGGGA--TAELADELWLDVVETNLTGVFRVTKE 121
Query: 176 VLP--GMLKRKKGAIVNIGS--GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
VL GML+R G I+NI S G V+ + P Y+A+K + F+++L +E ++GI
Sbjct: 122 VLKAGGMLERGTGRIINIASTGGKQGVVHAAP----YSASKHGVVGFTKALGLELARTGI 177
Query: 232 DVQCQVPLYVATKMASIKRSSF 253
V P +V T MA+ R +
Sbjct: 178 TVNAVCPGFVETPMAASVREHY 199
|
Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258 |
| >gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase | Back alignment and domain information |
|---|
Score = 76.8 bits (190), Expect = 4e-17
Identities = 40/173 (23%), Positives = 68/173 (39%), Gaps = 17/173 (9%)
Query: 55 WALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRN--PDKLKDVSDSIQAKYAKTQIKSVVV 111
L+TG T G+G + A LA G +LVLV R ++ ++A A+ +
Sbjct: 2 TVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTV--AAC 59
Query: 112 DFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
D + L + + A+ LD +++N G+ E+ + ++ V G
Sbjct: 60 DVADRDALAALLAALPAALGPLD--GVVHNAGVLDD--GPLEELTPERFERVLAPKVTGA 115
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSL 222
+ + GA V S A V+ S P + YAA A +D +
Sbjct: 116 WNLHELTRD----LDLGAFVLFSSVAG-VLGS-PGQANYAAANAALDALAEHR 162
|
This family contains a wide variety of dehydrogenases. Length = 167 |
| >gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 79.3 bits (196), Expect = 4e-17
Identities = 51/195 (26%), Positives = 83/195 (42%), Gaps = 6/195 (3%)
Query: 57 LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
++TG G+G++ A + A+ G L L N + ++ ++ + V
Sbjct: 4 MITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQ 63
Query: 117 LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAV 176
L + +E G+DV ++NN G++ FF E+ I +N+ G K +A
Sbjct: 64 LTALAQACEEKWGGIDV--IVNNAGVAS--GGFFEELSLEDWDWQIAINLMGVVKGCKAF 119
Query: 177 LPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQ 236
LP ++K G IVNI S A ++ P S Y KA + S +L VE I V
Sbjct: 120 LPLFKRQKSGRIVNIASMAGLMQG--PAMSSYNVAKAGVVALSETLLVELADDEIGVHVV 177
Query: 237 VPLYVATKMASIKRS 251
P + T + R
Sbjct: 178 CPSFFQTNLLDSFRG 192
|
Length = 270 |
| >gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 78.5 bits (194), Expect = 5e-17
Identities = 54/181 (29%), Positives = 86/181 (47%), Gaps = 21/181 (11%)
Query: 57 LVTGPTDGIGKSFAFQLAKTGLN--LVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
++TG + GIG++ A +L K G +VL+ R+ + L Q + + V
Sbjct: 3 ILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPL-------QELKEELRPGLRVTTVK 55
Query: 115 GDLD--EGVERIKEAIEGLDVG--VLINNVGISYPYAR-FFHEVDQVLLKNLIKVNVEGT 169
DL GVE++ EAI LD +LINN G P ++ F ++D+ L+ +N+
Sbjct: 56 ADLSDAAGVEQLLEAIRKLDGERDLLINNAGSLGPVSKIEFIDLDE--LQKYFDLNLTSP 113
Query: 170 TKVTQAVLPGMLKRK-KGAIVNIGSGAAI-VIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
+T +L KR K +VN+ SGAA+ + +Y ++KA D F R L E
Sbjct: 114 VCLTSTLLRAFKKRGLKKTVVNVSSGAAVNPFKG---WGLYCSSKAARDMFFRVLAAEEP 170
Query: 228 K 228
Sbjct: 171 D 171
|
Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241 |
| >gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 78.4 bits (194), Expect = 6e-17
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 29/208 (13%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G ALVTG + G+G A L + G +VL R ++L++ A I ++
Sbjct: 12 GKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEA----AAHLEALGIDALW-- 65
Query: 113 FSGDL--DEGVERI-KEAIEGL-DVGVLINNVGIS-------YPYARFFHEVDQVLLKNL 161
+ D+ + +ER+ +E +E V +L+NN G + +P + D+V
Sbjct: 66 IAADVADEADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAW----DKV----- 116
Query: 162 IKVNVEGTTKVTQAVLP-GMLKRKKGAIVNIGSGAAIV-IPSDPLYSV-YAATKAYIDQF 218
+ +NV G ++QAV M+ R G I+N+ S A + P + + ++ Y +K + F
Sbjct: 117 MNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINF 176
Query: 219 SRSLYVEYRKSGIDVQCQVPLYVATKMA 246
+R+L E+ GI V P + TKM
Sbjct: 177 TRALAAEWGPHGIRVNAIAPGFFPTKMT 204
|
Length = 259 |
| >gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 78.3 bits (193), Expect = 7e-17
Identities = 54/197 (27%), Positives = 85/197 (43%), Gaps = 12/197 (6%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI---QAKYAKTQIKSV 109
G A++TG GIG++ A AK G +V+ + D + V+ + + + +V
Sbjct: 4 GKVAIITGGASGIGEATARLFAKHGARVVIADIDDDAGQAVAAELGDPDISFVHCDV-TV 62
Query: 110 VVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
D +D V R LD+ + NN G+ E + ++ VNV G
Sbjct: 63 EADVRAAVDTAVARFGR----LDI--MFNNAGVLGAPCYSILETSLEEFERVLDVNVYGA 116
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
T+ M+ KKG+IV++ S A +V P Y A+K + +RS E +
Sbjct: 117 FLGTKHAARVMIPAKKGSIVSVASVAGVVGGLGP--HAYTASKHAVLGLTRSAATELGEH 174
Query: 230 GIDVQCQVPLYVATKMA 246
GI V C P VAT +
Sbjct: 175 GIRVNCVSPYGVATPLL 191
|
Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249 |
| >gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9 | Back alignment and domain information |
|---|
Score = 77.9 bits (192), Expect = 7e-17
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 28/236 (11%)
Query: 58 VTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVV--VDFSG 115
+TG GIG+ A A+ G + L + D L ++ + A+ V ++
Sbjct: 5 ITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAELGAENVVAGALDVTDRAAWAA 64
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARF--FHEVDQVLLKNLIKVNVEGTTKVT 173
L + G + L NN G+ R F +V ++ +NV+G
Sbjct: 65 ALADFAAA-----TGGRLDALFNNAGV----GRGGPFEDVPLAAHDRMVDINVKGVLNGA 115
Query: 174 QAVLPGMLKRKKGA-IVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
A LP LK GA ++N S +AI P +VY+ATK + + +L VE+ + GI
Sbjct: 116 YAALP-YLKATPGARVINTASSSAIY--GQPDLAVYSATKFAVRGLTEALDVEWARHGIR 172
Query: 233 VQCQVPLYVATKM-------ASIKRSSFFV-PSTDVYARAAMRWIGYEPCCTPYWP 280
V P +V T + A+ K+ V P +DV A + W ++
Sbjct: 173 VADVWPWFVDTPILTKGETGAAPKKGLGRVLPVSDV---AKVVWAAAHGVPKLHYT 225
|
This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227 |
| >gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 77.8 bits (192), Expect = 8e-17
Identities = 58/198 (29%), Positives = 84/198 (42%), Gaps = 22/198 (11%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G LVTG + GIG++ A LA+ G +V RN L ++ +T + + +D
Sbjct: 9 GKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLA-------GETGCEPLRLD 61
Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISY---PYARFFHEVDQVLLKNLIKVNVEGT 169
D + A D L+N GI+ D+V+ VN G
Sbjct: 62 VGDD--AAIRAALAAAGAFDG--LVNCAGIASLESALDMTAEGFDRVM-----AVNARGA 112
Query: 170 TKVTQAVLPGMLK-RKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
V + V M+ + G+IVN+ S AA+V P + Y A+KA +D +R L VE
Sbjct: 113 ALVARHVARAMIAAGRGGSIVNVSSQAALV--GLPDHLAYCASKAALDAITRVLCVELGP 170
Query: 229 SGIDVQCQVPLYVATKMA 246
GI V P T MA
Sbjct: 171 HGIRVNSVNPTVTLTPMA 188
|
Length = 245 |
| >gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 78.2 bits (193), Expect = 9e-17
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 38/207 (18%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKS--VV 110
G AL+TG + GIG + A AK G +V N + + D A Y + I++ V
Sbjct: 10 GKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELV----DKGLAAYRELGIEAHGYV 65
Query: 111 VDFSG--DLDEGVERIKEAIEGLDVGVLINNVGI-------SYPYARFFHEVDQVLLKNL 161
D + + V +I++ + +D+ L+NN GI F + +
Sbjct: 66 CDVTDEDGVQAMVSQIEKEVGVIDI--LVNNAGIIKRIPMLEMSAEDF---------RQV 114
Query: 162 IKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGS-----GAAIVIPSDPLYSVYAATKAYID 216
I +++ V++AV+P M+K+ G I+NI S G V S YAA K +
Sbjct: 115 IDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETV-------SAYAAAKGGLK 167
Query: 217 QFSRSLYVEYRKSGIDVQCQVPLYVAT 243
++++ EY ++ I P Y+AT
Sbjct: 168 MLTKNIASEYGEANIQCNGIGPGYIAT 194
|
Length = 265 |
| >gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 77.3 bits (191), Expect = 2e-16
Identities = 54/187 (28%), Positives = 84/187 (44%), Gaps = 18/187 (9%)
Query: 60 GPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDE 119
GP G+G++ A + A+ G ++VL R ++L +V+ I + +V D + DE
Sbjct: 14 GP--GLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRAL--AVPTDIT---DE 66
Query: 120 G-----VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
V E +D L+NN P + + D + +I++NV GT ++TQ
Sbjct: 67 DQCANLVALALERFGRVD--ALVNN-AFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQ 123
Query: 175 AVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQ 234
A P L G+IV I S ++ S P Y Y K + S+SL E GI V
Sbjct: 124 AFTPA-LAESGGSIVMINS--MVLRHSQPKYGAYKMAKGALLAASQSLATELGPQGIRVN 180
Query: 235 CQVPLYV 241
P Y+
Sbjct: 181 SVAPGYI 187
|
Length = 258 |
| >gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases | Back alignment and domain information |
|---|
Score = 77.1 bits (190), Expect = 2e-16
Identities = 54/193 (27%), Positives = 85/193 (44%), Gaps = 11/193 (5%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
ALVTG GIGK A +LAK G + + N + K+ + I + + +D S
Sbjct: 3 ALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA--GGKAVAYKLDVSD 60
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
+ +++ E G D V++NN G++ E+ + LK + VNV+G
Sbjct: 61 KDQVFSAIDQAAEKFGGFD--VMVNNAGVA--PITPILEITEEELKKVYNVNVKGVLFGI 116
Query: 174 QAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
QA K+ G I+N S A +P+ S Y++TK + +++ E GI
Sbjct: 117 QAAARQFKKQGHGGKIINAASIAGHE--GNPILSAYSSTKFAVRGLTQTAAQELAPKGIT 174
Query: 233 VQCQVPLYVATKM 245
V P V T M
Sbjct: 175 VNAYCPGIVKTPM 187
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254 |
| >gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 76.7 bits (189), Expect = 3e-16
Identities = 65/194 (33%), Positives = 93/194 (47%), Gaps = 12/194 (6%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNL-VLVGRNPDKLKDVSDSIQAKYAKTQIKSVVV 111
G AL+TG T GIG++ A + G + VL ++ K++ + K T IK V
Sbjct: 7 GKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKEL----REKGVFT-IKCDVG 61
Query: 112 DFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
+ + + E +++ +DV L+NN GI Y F E D+ +IK+N+ G
Sbjct: 62 N-RDQVKKSKEVVEKEFGRVDV--LVNNAGIMYLMP--FEEFDEEKYNKMIKINLNGAIY 116
Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
T LP + K GAIVNI S A I ++ + YA TKA I +R L E K GI
Sbjct: 117 TTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGT-TFYAITKAGIIILTRRLAFELGKYGI 175
Query: 232 DVQCQVPLYVATKM 245
V P +V T M
Sbjct: 176 RVNAVAPGWVETDM 189
|
Length = 255 |
| >gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 76.9 bits (190), Expect = 3e-16
Identities = 57/193 (29%), Positives = 93/193 (48%), Gaps = 28/193 (14%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
+VTG GIG+ A + A G +VLV R+ + + +V+ ++A + + +
Sbjct: 11 VVVTGAAQGIGRGVALRAAAEGARVVLVDRS-ELVHEVAAELRAAGGE------ALALTA 63
Query: 116 DLD--EGVER-IKEAIE---GLDVGVLINNVGISY---PYARFF-HEVDQVLLKNLIKVN 165
DL+ G + + A+E +DV LINNVG + P+ + +++ + ++L
Sbjct: 64 DLETYAGAQAAMAAAVEAFGRIDV--LINNVGGTIWAKPFEEYEEEQIEAEIRRSLFP-- 119
Query: 166 VEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
T +AVLP ML + GAIVN+ S A I P Y+A K ++ + SL E
Sbjct: 120 ---TLWCCRAVLPHMLAQGGGAIVNVSSIATRGINRVP----YSAAKGGVNALTASLAFE 172
Query: 226 YRKSGIDVQCQVP 238
Y + GI V P
Sbjct: 173 YAEHGIRVNAVAP 185
|
Length = 260 |
| >gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 77.1 bits (190), Expect = 3e-16
Identities = 56/187 (29%), Positives = 92/187 (49%), Gaps = 15/187 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
A++TG + GIG++ A LA+ G VL + + + D I K + K+ VD S
Sbjct: 9 AVITGASTGIGQASAIALAQEGAY-VLAVDIAEAVSETVDKI--KSNGGKAKAYHVDISD 65
Query: 116 D--LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
+ + + IKE +DV L NN G+ R HE + ++ V++ GT +T
Sbjct: 66 EQQVKDFASEIKEQFGRVDV--LFNNAGVDNAAGRI-HEYPVDVFDKIMAVDMRGTFLMT 122
Query: 174 QAVLPGMLKRKKGAIVNIGS--GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
+ +LP M++ + G+I+N S G A +D S Y A K + F++S+ +EY + GI
Sbjct: 123 KMLLPLMME-QGGSIINTSSFSGQA----ADLYRSGYNAAKGAVINFTKSIAIEYGRDGI 177
Query: 232 DVQCQVP 238
P
Sbjct: 178 RANAIAP 184
|
Length = 272 |
| >gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 76.3 bits (188), Expect = 4e-16
Identities = 56/200 (28%), Positives = 88/200 (44%), Gaps = 22/200 (11%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVV 111
G ALVTG T GIG A LA G N+VL G + +++ V + AK+ V+
Sbjct: 2 GKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVK-----VL 56
Query: 112 DFSGDLDEG------VERIKEAIEGLDVGVLINNVGISY--PYARFFHEVDQVLLKNLIK 163
DL + V + G+D +L+NN GI + P F ++ +I
Sbjct: 57 YHGADLSKPAAIEDMVAYAQRQFGGVD--ILVNNAGIQHVAPIEDF--PTEK--WDAIIA 110
Query: 164 VNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLY 223
+N+ T+ LP M K+ G I+NI S +V + S Y A K + ++ +
Sbjct: 111 LNLSAVFHTTRLALPHMKKQGWGRIINIASVHGLV--ASANKSAYVAAKHGVVGLTKVVA 168
Query: 224 VEYRKSGIDVQCQVPLYVAT 243
+E +G+ P +V T
Sbjct: 169 LETAGTGVTCNAICPGWVLT 188
|
DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258 |
| >gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 76.0 bits (187), Expect = 5e-16
Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 11/192 (5%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
A+VTG GIG++ A A+ G +V+ R+ + + V+ +I A + + D
Sbjct: 8 AIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAG---GRAFARQGDVGS 64
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
++ V+ + LDV L+NN G D+ +++VNV G
Sbjct: 65 AEAVEALVDFVAARWGRLDV--LVNNAGFGC--GGTVVTTDEADWDAVMRVNVGGVFLWA 120
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
+ +P M ++ G+IVN S A+ + Y A+K I +R++ +++ GI V
Sbjct: 121 KYAIPIMQRQGGGSIVNTASQLALA--GGRGRAAYVASKGAIASLTRAMALDHATDGIRV 178
Query: 234 QCQVPLYVATKM 245
P + T
Sbjct: 179 NAVAPGTIDTPY 190
|
Length = 252 |
| >gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 75.5 bits (186), Expect = 7e-16
Identities = 55/196 (28%), Positives = 90/196 (45%), Gaps = 19/196 (9%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G A+VTG GIG + A A G + L+ R+ D V++ + A+ K +V D
Sbjct: 15 GKVAVVTGGASGIGHAIAELFAAKGARVALLDRSED----VAE-VAAQLLGGNAKGLVCD 69
Query: 113 FSGDLDE---GVERIKEAIEGLDVGVLINNVGISY--PYARFFHEVDQVLLKNLIKVNVE 167
S D V + A +D+ L+N+ G++ P +V + I +N++
Sbjct: 70 VS-DSQSVEAAVAAVISAFGRIDI--LVNSAGVALLAPA----EDVSEEDWDKTIDINLK 122
Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
G+ + QAV M+ G IVN+ S A +V + + Y A+KA + ++ L +E+
Sbjct: 123 GSFLMAQAVGRHMIAAGGGKIVNLASQAGVV--ALERHVAYCASKAGVVGMTKVLALEWG 180
Query: 228 KSGIDVQCQVPLYVAT 243
GI V P V T
Sbjct: 181 PYGITVNAISPTVVLT 196
|
Length = 255 |
| >gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 75.5 bits (186), Expect = 7e-16
Identities = 53/193 (27%), Positives = 79/193 (40%), Gaps = 7/193 (3%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKL-KDVSDSIQAKYAKTQIKSVVVDFS 114
ALVTG + GIGK+ A +LA+ G ++V+ R +V+ I+ K + V
Sbjct: 1 ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEELGGKAVVVRADVSQP 60
Query: 115 GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
D++E +KE LD VL++N R E+ + N++ Q
Sbjct: 61 QDVEEMFAAVKERFGRLD--VLVSNAAAG--AFRPLSELTPAHWDAKMNTNLKALVHCAQ 116
Query: 175 AVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQ 234
M +R G IV I S +I P Y KA ++ R L VE GI V
Sbjct: 117 QAAKLMRERGGGRIVAISSLGSIRAL--PNYLAVGTAKAALEALVRYLAVELGPRGIRVN 174
Query: 235 CQVPLYVATKMAS 247
P + T +
Sbjct: 175 AVSPGVIDTDALA 187
|
This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242 |
| >gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR | Back alignment and domain information |
|---|
Score = 76.0 bits (187), Expect = 7e-16
Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 26/200 (13%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKT-QIKSVVVDFS 114
A++TG T +G + A LA+ G + +GRN +K V+ I A + + + V+D
Sbjct: 8 AVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGRAIALAADVLDR- 66
Query: 115 GDLDEGVERIKEAIEGL--DVGVLINNVGISYPYA------------RFFHEVDQVLLKN 160
+ER +E I V +LIN G ++P A + F ++D+ +
Sbjct: 67 ----ASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEGWEF 122
Query: 161 LIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV--YAATKAYIDQF 218
+ +N+ G+ +Q ML++K G+I+NI S A PL V Y+A KA + F
Sbjct: 123 VFDLNLNGSFLPSQVFGKDMLEQKGGSIINISSMNAFS----PLTKVPAYSAAKAAVSNF 178
Query: 219 SRSLYVEYRKSGIDVQCQVP 238
++ L VE+ +G+ V P
Sbjct: 179 TQWLAVEFATTGVRVNAIAP 198
|
D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271 |
| >gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3 | Back alignment and domain information |
|---|
Score = 74.3 bits (183), Expect = 1e-15
Identities = 51/180 (28%), Positives = 88/180 (48%), Gaps = 14/180 (7%)
Query: 58 VTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDL 117
+TG + GIG++ A A+ G +VL R+ + L +++ + + + +VV D D
Sbjct: 5 ITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREV--RELGGEAIAVVADV-ADA 61
Query: 118 DEGVERIKE-AIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
+ VER + A+E + +NN G++ + R F +V + + VN G T A
Sbjct: 62 AQ-VERAADTAVERFGRIDTWVNNAGVAV-FGR-FEDVTPEEFRRVFDVNYLGHVYGTLA 118
Query: 176 VLPGMLKRKKGAIVNIGS--GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
LP + +R GA++N+GS G PL + Y+A+K + F+ SL E G +
Sbjct: 119 ALPHLRRRGGGALINVGSLLGYRSA----PLQAAYSASKHAVRGFTESLRAELAHDGAPI 174
|
These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233 |
| >gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 74.1 bits (183), Expect = 2e-15
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 23/211 (10%)
Query: 45 PAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI-QAKYAK 103
P +L K LVTG DGIG+ A A+ G ++L+GR +KL+ V D I A +
Sbjct: 5 PKPDLLK-DRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQ 63
Query: 104 TQIKSVVVDFSG----DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK 159
I + +D + + + I+E LD GVL +N G+ D + +
Sbjct: 64 PAI--IPLDLLTATPQNYQQLADTIEEQFGRLD-GVL-HNAGLLGELGPMEQ-QDPEVWQ 118
Query: 160 NLIKVNVEGTTKVTQAVLPGMLKRKKGAIV----NIG-SGAAIVIPSDPLYSVYAATKAY 214
++++VNV T +TQA+LP +LK ++V ++G G A + YA +K
Sbjct: 119 DVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRA-------NWGAYAVSKFA 171
Query: 215 IDQFSRSLYVEYRKSGIDVQCQVPLYVATKM 245
+ + L EY+ + + V C P T M
Sbjct: 172 TEGMMQVLADEYQGTNLRVNCINPGGTRTAM 202
|
Length = 247 |
| >gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 74.1 bits (182), Expect = 2e-15
Identities = 51/193 (26%), Positives = 80/193 (41%), Gaps = 8/193 (4%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G +TG G+G++ A LA G + L+GR L + A + +V
Sbjct: 7 GKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDP 66
Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
V+ + LD L+N G + + + D + VNV+ T
Sbjct: 67 --QAARRAVDEVNRQFGRLDA--LVNIAGA-FVWGTI-ADGDADTWDRMYGVNVKTTLNA 120
Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
++A LP + G IVNIG+GAA+ + P YAA KA + + + +L E GI
Sbjct: 121 SKAALPALTASGGGRIVNIGAGAALK--AGPGMGAYAAAKAGVARLTEALAAELLDRGIT 178
Query: 233 VQCQVPLYVATKM 245
V +P + T
Sbjct: 179 VNAVLPSIIDTPP 191
|
Length = 239 |
| >gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 74.6 bits (184), Expect = 2e-15
Identities = 58/194 (29%), Positives = 86/194 (44%), Gaps = 15/194 (7%)
Query: 57 LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS-- 114
+TG GIG++ A A G + N L ++ + A A T +D +
Sbjct: 5 FITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTG----ALDVTDR 60
Query: 115 GDLDEGVERIKEAIEG-LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
D + A G LDV L NN GI F ++ +I +NV+G
Sbjct: 61 AAWDAALADFAAATGGRLDV--LFNNAGI--LRGGPFEDIPLEAHDRVIDINVKGVLNGA 116
Query: 174 QAVLPGMLKRKKGA-IVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
A LP LK GA ++N S +AI P +VY+ATK + + +L +E+R+ GI
Sbjct: 117 HAALP-YLKATPGARVINTSSASAIY--GQPGLAVYSATKFAVRGLTEALDLEWRRHGIR 173
Query: 233 VQCQVPLYVATKMA 246
V +PL+V T M
Sbjct: 174 VADVMPLFVDTAML 187
|
Length = 260 |
| >gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 74.0 bits (182), Expect = 2e-15
Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 35/198 (17%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
LVTG T GIG + + +LA G ++ + R+ DF G
Sbjct: 6 VLVTGATKGIGLALSLRLANLGHQVIGIARSAID----------------------DFPG 43
Query: 116 DL------DEG--VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVE 167
+L D + + E V ++NNVGI+ P ++D L+++ +NV
Sbjct: 44 ELFACDLADIEQTAATLAQINEIHPVDAIVNNVGIALPQP--LGKIDLAALQDVYDLNVR 101
Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
+VTQA L GM R++G IVNI S A I + Y+A K+ + +R+ +E
Sbjct: 102 AAVQVTQAFLEGMKLREQGRIVNICSRA---IFGALDRTSYSAAKSALVGCTRTWALELA 158
Query: 228 KSGIDVQCQVPLYVATKM 245
+ GI V P + T++
Sbjct: 159 EYGITVNAVAPGPIETEL 176
|
Length = 234 |
| >gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 74.2 bits (183), Expect = 2e-15
Identities = 60/185 (32%), Positives = 92/185 (49%), Gaps = 26/185 (14%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
ALVTG + GIGK+ A +LA G + R DK++D+ A + + +D +
Sbjct: 6 ALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDL--------ASLGVHPLSLDVTD 57
Query: 116 D--LDEGVERIKEAIEGLDVGVLINNVGI-SYPYARFFHEVDQVLL---KNLIKVNVEGT 169
+ + V+ I +DV L+NN G SY ++ V + + +VN+ G
Sbjct: 58 EASIKAAVDTIIAEEGRIDV--LVNNAGYGSY------GAIEDVPIDEARRQFEVNLFGA 109
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGS-GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
++TQ VLP M ++ G I+NI S G I PL + Y ATK ++ FS +L +E
Sbjct: 110 ARLTQLVLPHMRAQRSGRIINISSMGGKIY---TPLGAWYHATKFALEGFSDALRLEVAP 166
Query: 229 SGIDV 233
GIDV
Sbjct: 167 FGIDV 171
|
Length = 273 |
| >gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 73.7 bits (181), Expect = 3e-15
Identities = 61/202 (30%), Positives = 98/202 (48%), Gaps = 12/202 (5%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G +VTG GIG+ A +LA G ++LV R+ + + +V I A A D
Sbjct: 4 GKVVVVTGAAQGIGRGVAERLAGEGARVLLVDRS-ELVHEVLAEILA--AGDAAHVHTAD 60
Query: 113 FSGDLD-EGVERIKEAIEGLD-VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
+GV ++ A+E V VLINNVG + +A+ + ++ ++ I+ ++ T
Sbjct: 61 LETYAGAQGV--VRAAVERFGRVDVLINNVGGTI-WAKPYEHYEEEQIEAEIRRSLFPTL 117
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
+AVLP ML+R++G IVN+ S A I P Y+A K ++ + SL E+ + G
Sbjct: 118 WCCRAVLPHMLERQQGVIVNVSSIATRGIYRIP----YSAAKGGVNALTASLAFEHARDG 173
Query: 231 IDVQCQVPLYVATKMASIKRSS 252
I V P I R++
Sbjct: 174 IRVNAVAPGGTEAPPRKIPRNA 195
|
DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256 |
| >gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 73.6 bits (181), Expect = 4e-15
Identities = 59/195 (30%), Positives = 91/195 (46%), Gaps = 12/195 (6%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVV 111
G ALVTG + GIGK+ A +LA G N+V+ R D ++V + I+A K +V
Sbjct: 3 GKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGGKAI--AVQA 60
Query: 112 DFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
D S D+ + + LD +L+NN G+ + HE+ +I VN+ G
Sbjct: 61 DVSKEEDVVALFQSAIKEFGTLD--ILVNNAGLQGDAS--SHEMTLEDWNKVIDVNLTGQ 116
Query: 170 TKVTQAVLPGMLK-RKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
+ + K + KG I+N+ S IP P + YAA+K + +++L EY
Sbjct: 117 FLCAREAIKRFRKSKIKGKIINMSS-VHEKIPW-PGHVNYAASKGGVKMMTKTLAQEYAP 174
Query: 229 SGIDVQCQVPLYVAT 243
GI V P + T
Sbjct: 175 KGIRVNAIAPGAINT 189
|
GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253 |
| >gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 73.1 bits (180), Expect = 4e-15
Identities = 59/203 (29%), Positives = 92/203 (45%), Gaps = 32/203 (15%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G AL+TG + GIG + A L G + + R+ +L++ + + K + + V D
Sbjct: 6 GKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRD 65
Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLL---KNLIKVNVEGT 169
D+ V+ I A GLD VLI N G+ + F V+++ + +I N+ G
Sbjct: 66 E-ADVQRAVDAIVAAFGGLD--VLIANAGVGH-----FAPVEELTPEEWRLVIDTNLTGA 117
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGS---------GAAIVIPSDPLYSVYAATKAYIDQFSR 220
+A +P LKR G I+NI S GAA Y A+K + FS
Sbjct: 118 FYTIKAAVPA-LKRGGGYIINISSLAGTNFFAGGAA-----------YNASKFGLVGFSE 165
Query: 221 SLYVEYRKSGIDVQCQVPLYVAT 243
+ ++ R+ GI V +P VAT
Sbjct: 166 AAMLDLRQYGIKVSTIMPGSVAT 188
|
Length = 237 |
| >gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 73.5 bits (181), Expect = 4e-15
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 57 LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
L+TG G G+ A +LA+ G N++ + ++ + +A ++ +D +
Sbjct: 6 LITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRA--EAARRGLALRVEKLDLTDA 63
Query: 117 LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAV 176
+D +A E DV VL+NN GI A ++ L++ L + NV G ++TQ
Sbjct: 64 ID-----RAQAAE-WDVDVLLNNAGIGEAGAVV--DIPVELVRELFETNVFGPLELTQGF 115
Query: 177 LPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQ 234
+ M+ R KG +V S A ++ P Y A+K ++ + +++ E + GI V
Sbjct: 116 VRKMVARGKGKVVFTSSMAGLITG--PFTGAYCASKHALEAIAEAMHAELKPFGIQVA 171
|
Length = 257 |
| >gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 72.9 bits (179), Expect = 6e-15
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 34/209 (16%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G LVTG + GIG+ A + G +++ R + D ++ + + Y + ++ D
Sbjct: 6 GKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEEL-SAYGECI--AIPAD 62
Query: 113 FSGDLDEGVE----RIKEAIEGLDVGVLINNVGIS-------YPYARFFHEVDQVLLKNL 161
S + EG+E R+ E + LDV L+NN G + +P + + D+V+
Sbjct: 63 LSSE--EGIEALVARVAERSDRLDV--LVNNAGATWGAPLEAFPESGW----DKVM---- 110
Query: 162 IKVNVEGTTKVTQAVLPGMLKRKKGA-----IVNIGSGAAIVIPSDPLYSVYAATKAYID 216
+NV+ +TQA+LP +L+ A ++NIGS A IV+ YS Y A+KA +
Sbjct: 111 -DINVKSVFFLTQALLP-LLRAAATAENPARVINIGSIAGIVVSGLENYS-YGASKAAVH 167
Query: 217 QFSRSLYVEYRKSGIDVQCQVPLYVATKM 245
Q +R L E I V P +KM
Sbjct: 168 QLTRKLAKELAGEHITVNAIAPGRFPSKM 196
|
Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 72.2 bits (177), Expect = 7e-15
Identities = 60/198 (30%), Positives = 96/198 (48%), Gaps = 20/198 (10%)
Query: 57 LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
LVTG +DGIG+ A A+ G ++L+GRN +KL+ V+D I + Q + ++D
Sbjct: 8 LVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEE-GGRQPQWFILDLLTC 66
Query: 117 LDEGVERIKEAIEG----LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
E +++ + I LD GVL +N G+ + QV +++ +VNV T +
Sbjct: 67 TSENCQQLAQRIAVNYPRLD-GVL-HNAGLLGDVCPLSEQNPQV-WQDVXQVNVNATFML 123
Query: 173 TQAVLPGMLKRKKGAIVNIGS-----GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
TQA+LP +LK G++V S G A + YA +K + + L EY+
Sbjct: 124 TQALLPLLLKSDAGSLVFTSSSVGRQGRA-------NWGAYAVSKFATEGLXQVLADEYQ 176
Query: 228 KSGIDVQCQVPLYVATKM 245
+ + V C P T M
Sbjct: 177 QRNLRVNCINPGGTRTAM 194
|
Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236 |
| >gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 72.7 bits (179), Expect = 7e-15
Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 24/186 (12%)
Query: 57 LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
+VTG + GIG + +L G N+V + + ++ Q + T + S + +
Sbjct: 13 IVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH--ENYQ--FVPTDVSS-----AEE 63
Query: 117 LDEGVERIKEAIEGLDVGVLINNVGISYPYARFF---------HEVDQVLLKNLIKVNVE 167
++ V I E +D L+NN GI+ P R +E+++ + +N +
Sbjct: 64 VNHTVAEIIEKFGRIDG--LVNNAGINIP--RLLVDEKDPAGKYELNEAAFDKMFNINQK 119
Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
G ++QAV M+K+ G IVN+ S A + S YAATKA ++ F+RS E
Sbjct: 120 GVFLMSQAVARQMVKQHDGVIVNMSSEAG--LEGSEGQSCYAATKAALNSFTRSWAKELG 177
Query: 228 KSGIDV 233
K I V
Sbjct: 178 KHNIRV 183
|
Length = 266 |
| >gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 72.4 bits (178), Expect = 8e-15
Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 30/204 (14%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-----NPDKLKDVSDSIQAKYAKTQIK 107
G A VTG + GIG++ A +LAK G +V+ + + K + +I+ + +
Sbjct: 3 GKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIEAA 62
Query: 108 -----SVVVDFSGDLDEGVERIKEAIE---GLDVGVLINNVGISYPYARFFHEVDQVLLK 159
+VVD D D+ ++ ++ LD +L+NN G A + V+ K
Sbjct: 63 GGQALPIVVDVR-DEDQVRALVEATVDQFGRLD--ILVNNAG-----AIWLSLVEDTPAK 114
Query: 160 N---LIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY--SVYAATKAY 214
+ +VN+ GT ++QA LP M+K +G I+NI + P YAA KA
Sbjct: 115 RFDLMQRVNLRGTYLLSQAALPHMVKAGQGHILNISP----PLSLRPARGDVAYAAGKAG 170
Query: 215 IDQFSRSLYVEYRKSGIDVQCQVP 238
+ + + L E R+ GI V P
Sbjct: 171 MSRLTLGLAAELRRHGIAVNSLWP 194
|
This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246 |
| >gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR | Back alignment and domain information |
|---|
Score = 71.7 bits (176), Expect = 2e-14
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI--QAKYAKTQIKSVVVDF 113
A+VTG G G+ A + A+ G +V+ N D + V+ I A + +
Sbjct: 8 AIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERVAADIGEAAIAIQADVTK----- 62
Query: 114 SGDLDEGVERIKEAIEGLDVGVLINNVGISY---PYARFFHEVDQVLLKNLIKVNVEGTT 170
D++ VE LD+ L+NN GI++ P EVD+ + VNV+
Sbjct: 63 RADVEAMVEAALSKFGRLDI--LVNNAGITHRNKPML----EVDEEEFDRVFAVNVKSIY 116
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
QA++P M ++ G I+NI S A + P + Y A+K ++ ++++ VE
Sbjct: 117 LSAQALVPHMEEQGGGVIINIASTAG--LRPRPGLTWYNASKGWVVTATKAMAVELAPRN 174
Query: 231 IDVQCQVPLYVATKMASIKRSSFFVPST 258
I V C P+ T + S F T
Sbjct: 175 IRVNCLCPVAGETPLL----SMFMGEDT 198
|
This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248 |
| >gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 71.4 bits (175), Expect = 2e-14
Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 7/189 (3%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKT-QIKSVVVDFS 114
A+VTG GIGK+ A LAK G ++V+ + + V+ +IQ + ++ V
Sbjct: 2 AIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIGLECNVTSEQ 61
Query: 115 GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
DL+ V+ G+ +L+NN G P F + + + K+N+ +++Q
Sbjct: 62 -DLEAVVKATVSQFGGIT--ILVNNAGGGGPK-PFDMPMTEEDFEWAFKLNLFSAFRLSQ 117
Query: 175 AVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQ 234
P M K GAI+NI S ++ + + Y ++KA ++ +R+L + GI V
Sbjct: 118 LCAPHMQKAGGGAILNISSMSSEN--KNVRIAAYGSSKAAVNHMTRNLAFDLGPKGIRVN 175
Query: 235 CQVPLYVAT 243
P V T
Sbjct: 176 AVAPGAVKT 184
|
This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242 |
| >gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Score = 71.5 bits (175), Expect = 2e-14
Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 17/197 (8%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK----DVSDSIQAKYAKTQIKS 108
G ALVTG + GIG+ A L G + L G +KL+ ++ + ++ A +
Sbjct: 6 GRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRD 65
Query: 109 VVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEG 168
V ++ + +EG+D+ L+NN GI+ F D+ ++++VN+
Sbjct: 66 EVKALG-------QKAEADLEGVDI--LVNNAGITKD-GLFVRMSDEDW-DSVLEVNLTA 114
Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
T ++T+ + M++R+ G I+NI S + +P + Y A+KA + FS+SL E
Sbjct: 115 TFRLTRELTHPMMRRRYGRIINITSVVGVT--GNPGQANYCASKAGMIGFSKSLAQEIAT 172
Query: 229 SGIDVQCQVPLYVATKM 245
+ V C P ++ + M
Sbjct: 173 RNVTVNCVAPGFIESAM 189
|
Length = 245 |
| >gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 71.1 bits (175), Expect = 4e-14
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 13/179 (7%)
Query: 57 LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS-- 114
L+TG + G G++ A G +V R+ D + + ++D +
Sbjct: 8 LITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADF-----EALHPDRALARLLDVTDF 62
Query: 115 GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
+D V + +DV L+NN G + A E ++ +VNV G +T+
Sbjct: 63 DAIDAVVADAEATFGPIDV--LVNNAGYGHEGA--IEESPLAEMRRQFEVNVFGAVAMTK 118
Query: 175 AVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
AVLPGM R++G IVNI S ++ + P Y +K ++ S SL E GI V
Sbjct: 119 AVLPGMRARRRGHIVNITSMGGLI--TMPGIGYYCGSKFALEGISESLAKEVAPFGIHV 175
|
Length = 277 |
| >gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 70.1 bits (172), Expect = 6e-14
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 14/199 (7%)
Query: 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSV 109
R G AL+TG GIG++ A + G +V+ P + + + I +V
Sbjct: 3 RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGP-----AAIAV 57
Query: 110 VVDFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVE 167
+D + +D V E G+D +L NN + + A ++ + L VNV+
Sbjct: 58 SLDVTRQDSIDRIVAAAVERFGGID--ILFNNAAL-FDMAPIL-DISRDSYDRLFAVNVK 113
Query: 168 GTTKVTQAVLPGMLKRKKGA-IVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
G + QAV M+++ +G I+N+ S A + L S Y ATKA + +++S +
Sbjct: 114 GLFFLMQAVARHMVEQGRGGKIINMASQAG--RRGEALVSHYCATKAAVISYTQSAALAL 171
Query: 227 RKSGIDVQCQVPLYVATKM 245
+ GI+V P V T M
Sbjct: 172 IRHGINVNAIAPGVVDTPM 190
|
Length = 257 |
| >gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 70.0 bits (172), Expect = 6e-14
Identities = 59/247 (23%), Positives = 111/247 (44%), Gaps = 15/247 (6%)
Query: 57 LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKY--AKTQIKSVVVDFS 114
L+TG + G+G A + A G +L L R D+L+++ + A+Y K + ++ V+
Sbjct: 6 LITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDH 65
Query: 115 GDLDEGVERIKEAIEGLDVGVLINNVGI--SYPYAR-FFHEVDQVLLKNLIKVNVEGTTK 171
+ E ++ + GLD +I N GI F N + +
Sbjct: 66 DQVFEVFAEFRDELGGLDR--VIVNAGIGKGARLGTGKFWANKATAETNFVAALAQ---- 119
Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
+A + ++ G +V I S +A+ + YAA+KA + L E K+ I
Sbjct: 120 -CEAAMEIFREQGSGHLVLISSVSAVRGLPGVK-AAYAASKAGVASLGEGLRAELAKTPI 177
Query: 232 DVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEP--CCTPYWPHSFIWGVLS 289
V P Y+ ++M + +S+ F+ T+ +A ++ I EP P+WP + + ++
Sbjct: 178 KVSTIEPGYIRSEMNAKAKSTPFMVDTETGVKALVKAIEKEPGRAAVPWWPWAPLGALMR 237
Query: 290 ILPEKLI 296
+LP +L+
Sbjct: 238 VLPLRLV 244
|
Length = 248 |
| >gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 69.8 bits (171), Expect = 7e-14
Identities = 59/189 (31%), Positives = 83/189 (43%), Gaps = 18/189 (9%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
A+VTG GIG+++A LA+ G ++V+ N + + V+ I A +V VD S
Sbjct: 9 AIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGG--TAIAVQVDVS- 65
Query: 116 DLDEG---VERIKEAIEGLDVGVLINNVGISYPYAR--FFHEVDQVLLKNLIKVNVEGTT 170
D D + A G+D L+NN I Y + V K + VN++G
Sbjct: 66 DPDSAKAMADATVSAFGGIDY--LVNNAAI-YGGMKLDLLITVPWDYYKKFMSVNLDGAL 122
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS-VYAATKAYIDQFSRSLYVEYRKS 229
T+AV M KR GAIVN S AA LYS Y K ++ ++ L E
Sbjct: 123 VCTRAVYKHMAKRGGGAIVNQSSTAAW------LYSNFYGLAKVGLNGLTQQLARELGGM 176
Query: 230 GIDVQCQVP 238
I V P
Sbjct: 177 NIRVNAIAP 185
|
Length = 250 |
| >gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 71.0 bits (174), Expect = 1e-13
Identities = 53/191 (27%), Positives = 92/191 (48%), Gaps = 16/191 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
+TG GIG++ A + A G L+++ R+ + K +++++ ++ SV D +
Sbjct: 272 VAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHL-----SVQADIT- 325
Query: 116 DLDEG-VERIKEAIEGL--DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
DE VE I+ + VL+NN GI+ + + + + VN+ G
Sbjct: 326 --DEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDF-TRVYDVNLSGAFAC 382
Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
+A M + G IVN+GS A+++ + P + Y A+KA + SRSL E+ +GI
Sbjct: 383 ARAAARLM--SQGGVIVNLGSIASLL--ALPPRNAYCASKAAVTMLSRSLACEWAPAGIR 438
Query: 233 VQCQVPLYVAT 243
V P Y+ T
Sbjct: 439 VNTVAPGYIET 449
|
Length = 520 |
| >gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 69.4 bits (170), Expect = 1e-13
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 18/201 (8%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP-DKLKDVSDSIQAKYAKTQIKSVVV 111
G ALVTG + GIG+ A QL + G + + GR +L ++ I+A+ K V
Sbjct: 3 GKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGGKCI--PVRC 60
Query: 112 DFSGDLD--EGVERIKEAIEG-LDVGVLINNV-----GISYPYARFFHEVDQVLLKNLIK 163
D S D + ER+ +G LD +L+NN I A+ F E + ++
Sbjct: 61 DHSDDDEVEALFERVAREQQGRLD--ILVNNAYAAVQLILVGVAKPFWEEPPTIWDDINN 118
Query: 164 VNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV-YAATKAYIDQFSRSL 222
V + + P M+K KG IV I S + + L++V Y KA ID+ + +
Sbjct: 119 VGLRAHYACSVYAAPLMVKAGKGLIVIISSTGGL----EYLFNVAYGVGKAAIDRMAADM 174
Query: 223 YVEYRKSGIDVQCQVPLYVAT 243
E + G+ V P +V T
Sbjct: 175 AHELKPHGVAVVSLWPGFVRT 195
|
This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265 |
| >gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Score = 69.3 bits (169), Expect = 1e-13
Identities = 55/197 (27%), Positives = 104/197 (52%), Gaps = 13/197 (6%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKT--QIKSVV 110
G A+VTG GIGK+ LA+ G +V+ N + K+ ++++ + K + +V
Sbjct: 6 GKVAIVTGGAKGIGKAITVALAQEGAKVVI---NYNSSKEAAENLVNELGKEGHDVYAVQ 62
Query: 111 VDFSGDLDEGVERIKEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
D S +++ ++EA+ V +L+NN GI+ R F ++++ + +I VN+
Sbjct: 63 ADVS-KVEDANRLVEEAVNHFGKVDILVNNAGITRD--RTFKKLNREDWERVIDVNLSSV 119
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL-YSVYAATKAYIDQFSRSLYVEYRK 228
T AVLP + + ++G I++I S I+ + + Y+A KA + F++SL +E K
Sbjct: 120 FNTTSAVLPYITEAEEGRIISISS---IIGQAGGFGQTNYSAAKAGMLGFTKSLALELAK 176
Query: 229 SGIDVQCQVPLYVATKM 245
+ + V P ++ T+M
Sbjct: 177 TNVTVNAICPGFIDTEM 193
|
Length = 247 |
| >gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 69.0 bits (169), Expect = 1e-13
Identities = 50/182 (27%), Positives = 77/182 (42%), Gaps = 15/182 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
+VTG GIG++ A L + G ++ + L + D ++ V D +
Sbjct: 1 VIVTGAAQGIGRAVARHLLQAGATVIALDLPFVLLLEYGDPLRLT------PLDVAD-AA 53
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
+ E R+ +D L+N G+ P A + + VNV G + QA
Sbjct: 54 AVREVCSRLLAEHGPIDA--LVNCAGVLRPGA--TDPLSTEDWEQTFAVNVTGVFNLLQA 109
Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
V P M R+ GAIV + S AA V + Y A+KA + S+ L +E G V+C
Sbjct: 110 VAPHMKDRRTGAIVTVASNAAHVPRIS--MAAYGASKAALASLSKCLGLELAPYG--VRC 165
Query: 236 QV 237
V
Sbjct: 166 NV 167
|
2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244 |
| >gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 71.0 bits (175), Expect = 1e-13
Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 12/181 (6%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
ALVTG GIGK+ A +LA G +VL + + + + + + V D +
Sbjct: 425 ALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELG---GPDRALGVACDVTD 481
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
+ E A G+D ++++N GI+ D+ ++ VN G V
Sbjct: 482 EAAVQAAFEEAALAFGGVD--IVVSNAGIAIS-GPIEETSDEDWRRSF-DVNATGHFLVA 537
Query: 174 QAVLPGMLKRKKG-AIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
+ + M + G +IV I S A+ P P + Y A KA R L +E GI
Sbjct: 538 REAVRIMKAQGLGGSIVFIASKNAVN-PG-PNFGAYGAAKAAELHLVRQLALELGPDGIR 595
Query: 233 V 233
V
Sbjct: 596 V 596
|
Length = 681 |
| >gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 69.4 bits (170), Expect = 1e-13
Identities = 55/194 (28%), Positives = 87/194 (44%), Gaps = 17/194 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
L+TG + GIG++ A G + R + DV A + Q+ V+
Sbjct: 4 VLITGCSSGIGRALADAFKAAGYEVWATARKAE---DVEALAAAGFTAVQLD---VNDGA 57
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISY--PYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
L E ++ GLDV LINN G P E ++ + NV VT
Sbjct: 58 ALARLAEELEAEHGGLDV--LINNAGYGAMGPLLDGGVEA----MRRQFETNVFAVVGVT 111
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
+A+ P +L+R +G +VNIGS + +++ P Y A+KA + S +L +E G+ V
Sbjct: 112 RALFP-LLRRSRGLVVNIGSVSGVLV--TPFAGAYCASKAAVHALSDALRLELAPFGVQV 168
Query: 234 QCQVPLYVATKMAS 247
P +A++ AS
Sbjct: 169 MEVQPGAIASQFAS 182
|
Length = 274 |
| >gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 68.8 bits (169), Expect = 2e-13
Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 26/198 (13%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-PDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
ALVTG T GIG + +L + G +V R+ PD L + + + A
Sbjct: 12 ALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDLPEGVEFVAADLTTA---------- 61
Query: 115 GDLDEGVERI-KEAIEGL-DVGVLINNVGISYPYARFFHEV-DQVLLKNLIKVNVEGTTK 171
EG + + +E L V +L++ +G S A F + D+ L +N+ +
Sbjct: 62 ----EGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDEL-NLNLLAAVR 116
Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV---YAATKAYIDQFSRSLYVEYRK 228
+ +A+LPGM+ R G I+++ S + PL YAA KA + +S+SL E
Sbjct: 117 LDRALLPGMIARGSGVIIHVTSIQRRL----PLPESTTAYAAAKAALSTYSKSLSKEVAP 172
Query: 229 SGIDVQCQVPLYVATKMA 246
G+ V P ++ T+ A
Sbjct: 173 KGVRVNTVSPGWIETEAA 190
|
Length = 260 |
| >gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Score = 68.6 bits (168), Expect = 2e-13
Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 25/200 (12%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVV 111
G ALVTG G+G+ A LA+ G ++V GR P + + +++ ++ S+
Sbjct: 5 GKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFL-----SLTA 59
Query: 112 DFS--GDLDEGVERIKEAIEGLDVGVLINNVG-ISYPYARFFHEVDQVLLKNLIKVNVEG 168
D S + V+ E +D +L+NN G I A F E D +++ VN++
Sbjct: 60 DLSDIEAIKALVDSAVEEFGHID--ILVNNAGIIRRADAEEFSEKD---WDDVMNVNLKS 114
Query: 169 TTKVTQAVLPGMLKR-KKGAIVNIGS----GAAIVIPSDPLYSVYAATKAYIDQFSRSLY 223
+TQA LK+ + G I+NI S I +PS Y A+K + ++ L
Sbjct: 115 VFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPS------YTASKHAVAGLTKLLA 168
Query: 224 VEYRKSGIDVQCQVPLYVAT 243
E+ GI+V P Y+AT
Sbjct: 169 NEWAAKGINVNAIAPGYMAT 188
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248 |
| >gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 68.9 bits (169), Expect = 2e-13
Identities = 54/201 (26%), Positives = 82/201 (40%), Gaps = 18/201 (8%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G A++TG G G +FA A G+ LVL D L ++A+ A ++ V D
Sbjct: 6 GKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGA--EVLGVRTD 63
Query: 113 FSGDLDEGVERI-KEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
S VE + A+E V +L NN G+ E + ++ VN+ G
Sbjct: 64 VS--DAAQVEALADAALERFGAVHLLFNNAGVG--AGGLVWENSLADWEWVLGVNLWGVI 119
Query: 171 KVTQAVLPGMLKRKK------GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYV 224
+A P ML + G IVN S A ++ P P +Y +K + + +LY
Sbjct: 120 HGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAP--PAMGIYNVSKHAVVSLTETLYQ 177
Query: 225 EYRKSGIDVQCQV--PLYVAT 243
+ V V P +V T
Sbjct: 178 DLSLVTDQVGASVLCPYFVPT 198
|
Length = 287 |
| >gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 67.7 bits (166), Expect = 3e-13
Identities = 51/198 (25%), Positives = 76/198 (38%), Gaps = 38/198 (19%)
Query: 57 LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
L+TG GIG + A G + V D + +D S D
Sbjct: 9 LITGAASGIGLAQARAFLAQGAQVYGV-----------DKQDKPDLSGNFHFLQLDLSDD 57
Query: 117 LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAV 176
L+ + + V +L N GI Y + +++ N+ T +T+A
Sbjct: 58 LEPLFDWVPS------VDILCNTAGILDDYKPL-LDTSLEEWQHIFDTNLTSTFLLTRAY 110
Query: 177 LPGMLKRKKGAIVNI---------GSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
LP ML+RK G I+N+ G GAA Y A+K + F++ L ++Y
Sbjct: 111 LPQMLERKSGIIINMCSIASFVAGGGGAA-----------YTASKHALAGFTKQLALDYA 159
Query: 228 KSGIDVQCQVPLYVATKM 245
K GI V P V T M
Sbjct: 160 KDGIQVFGIAPGAVKTPM 177
|
Length = 235 |
| >gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 67.8 bits (166), Expect = 3e-13
Identities = 49/195 (25%), Positives = 94/195 (48%), Gaps = 11/195 (5%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK-LKDVSDSIQAKYAKTQIKSVVVDFS 114
A +TG G+G++ A ++A+ G + L N L + I A + + + V D +
Sbjct: 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVT 61
Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
+ + +A+ GL V L+NN G+ A +++ + ++ +NVE
Sbjct: 62 DEAQWQALLAQAADAMGGLSV--LVNNAGVGSFGA--IEQIELDEWRRVMAINVESIFLG 117
Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
+ LP + + +IVNI S AA +P Y+ Y A+KA + ++S+ ++ + G+D
Sbjct: 118 CKHALPYLRASQPASIVNISSVAAFKA--EPDYTAYNASKAAVASLTKSIALDCARRGLD 175
Query: 233 VQCQV--PLYVATKM 245
V+C P ++ T +
Sbjct: 176 VRCNSIHPTFIRTGI 190
|
Length = 251 |
| >gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR | Back alignment and domain information |
|---|
Score = 67.9 bits (166), Expect = 3e-13
Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 16/199 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
LVTG + G+G + A A+ G +V+ R+ + + V+ + I++ V D
Sbjct: 3 VLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAAEAGER--AIAIQADVRDRD 60
Query: 115 GDLDEGVERIKEAIEGLDVGVLINNVGISYPY----ARFFHEVDQVLLKNLIKVNVEGTT 170
+ +E K +D ++NN I +P+ + F +D + ++ V+G
Sbjct: 61 -QVQAMIEEAKNHFGPVDT--IVNNALIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKGAL 117
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAI--VIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
+ QAVLP +R G ++NIG+ V+P Y Y KA + F+R++ E
Sbjct: 118 NLLQAVLPDFKERGSGRVINIGTNLFQNPVVP----YHDYTTAKAALLGFTRNMAKELGP 173
Query: 229 SGIDVQCQVPLYVATKMAS 247
GI V + AS
Sbjct: 174 YGITVNMVSGGLLKVTDAS 192
|
This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246 |
| >gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 67.8 bits (166), Expect = 5e-13
Identities = 56/197 (28%), Positives = 89/197 (45%), Gaps = 18/197 (9%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
VTG GIG++ A +LA G L L R+ D L +A T + +D S
Sbjct: 3 CFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGG-TVPEHRALDIS- 60
Query: 116 DLDEGVE---RIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVL---LKNLIKVNVEGT 169
D D I A +D V++N GIS + VD++ + ++ VN+ G
Sbjct: 61 DYDAVAAFAADIHAAHGSMD--VVMNIAGIS-----AWGTVDRLTHEQWRRMVDVNLMGP 113
Query: 170 TKVTQAVLPGMLK-RKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
V + +P M+ + G +VN+ S A +V + P ++ Y+A+K + S L + +
Sbjct: 114 IHVIETFVPPMVAAGRGGHLVNVSSAAGLV--ALPWHAAYSASKFGLRGLSEVLRFDLAR 171
Query: 229 SGIDVQCQVPLYVATKM 245
GI V VP V T +
Sbjct: 172 HGIGVSVVVPGAVKTPL 188
|
Length = 272 |
| >gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 67.4 bits (165), Expect = 6e-13
Identities = 55/193 (28%), Positives = 84/193 (43%), Gaps = 10/193 (5%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQ-AKYAKTQIKSVVVDFS 114
A++TG GIG++ A +LA G N+VL N ++ +IQ A +V D +
Sbjct: 5 AIITGAAQGIGRAIAERLAADGFNIVLADLNLEEA--AKSTIQEISEAGYNAVAVGADVT 62
Query: 115 GDLDEGVERIKEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
D D+ I +A+E V++NN GI+ + + LK + VNV G
Sbjct: 63 -DKDDVEALIDQAVEKFGSFDVMVNNAGIA--PITPLLTITEEDLKKVYAVNVFGVLFGI 119
Query: 174 QAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
QA K G I+N S A + P Y+A+K + +++ E GI
Sbjct: 120 QAAARQFKKLGHGGKIINASSIAGVQ--GFPNLGAYSASKFAVRGLTQTAAQELAPKGIT 177
Query: 233 VQCQVPLYVATKM 245
V P V T+M
Sbjct: 178 VNAYAPGIVKTEM 190
|
2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 67.1 bits (164), Expect = 6e-13
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 19/196 (9%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
A+VTG + GIG + A +LA G + + + ++ I+A A + +V D +
Sbjct: 8 AIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEA--AGGRAIAVQADVA 65
Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARFFHEV-DQVLLKNLIKVNVEGT 169
+ + + A +DV L+NN G+ A F E D+ I N+ G
Sbjct: 66 DAAAVTRLFDAAETAFGRIDV--LVNNAGVMPLGTIADFDLEDFDRT-----IATNLRGA 118
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
V + + + G I+N+ S + I +P P Y YAA+KA ++ L E R
Sbjct: 119 FVVLREAARHL--GQGGRIINL-STSVIALPL-PGYGPYAASKAAVEGLVHVLANELRGR 174
Query: 230 GIDVQCQVPLYVATKM 245
GI V P VAT++
Sbjct: 175 GITVNAVAPGPVATEL 190
|
Length = 245 |
| >gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 66.8 bits (163), Expect = 8e-13
Identities = 51/197 (25%), Positives = 80/197 (40%), Gaps = 19/197 (9%)
Query: 57 LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
L+TG G+G + A +LAK G L LV N + L+ ++ ++ + D S +
Sbjct: 7 LITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIKADVSDE 66
Query: 117 ------LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
+D VE+ I+G NN GI + ++ +N+ G
Sbjct: 67 AQVEAYVDATVEQFGR-IDG-----FFNNAGIEGKQN-LTEDFGADEFDKVVSINLRGVF 119
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAI--VIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
+ VL M ++ G IVN S I V YAA K + +R+ VEY +
Sbjct: 120 YGLEKVLKVMREQGSGMIVNTASVGGIRGVGNQSG----YAAAKHGVVGLTRNSAVEYGQ 175
Query: 229 SGIDVQCQVPLYVATKM 245
GI + P + T M
Sbjct: 176 YGIRINAIAPGAILTPM 192
|
Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase | Back alignment and domain information |
|---|
Score = 66.9 bits (163), Expect = 8e-13
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 17/208 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLN----LVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVV 111
LVTG + G G++ A +LAK + LVL RN + L+ + I A+ + ++ V +
Sbjct: 3 CLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSL 62
Query: 112 DFSG--DLDEGVERIKEAI--EGLDVGVLINNVGISYPYARFFHEV-DQVLLKNLIKVNV 166
D L++ ++ ++E +GL +LINN G ++ F ++ D ++N +N+
Sbjct: 63 DLGAEAGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNL 122
Query: 167 EGTTKVTQAVLPGMLKRKKGA---IVNIGSGAAIV-IPSDPLYSVYAATKAYIDQFSRSL 222
+T +VL K G +VNI S AI +++Y A KA D + L
Sbjct: 123 TSMLCLTSSVLK-AFKDSPGLNRTVVNISSLCAIQPFKG---WALYCAGKAARDMLFQVL 178
Query: 223 YVEYRKSGIDVQCQVPLYVATKMASIKR 250
+E + + V P + T M R
Sbjct: 179 ALEEKNPNVRVLNYAPGVLDTDMQQQVR 206
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256 |
| >gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 66.6 bits (163), Expect = 9e-13
Identities = 50/190 (26%), Positives = 79/190 (41%), Gaps = 29/190 (15%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI--QAKYAKTQIKSVV 110
G A+VTG IG + A L G + +V + D V+ S+ +A++ T I
Sbjct: 6 GKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITD-- 63
Query: 111 VDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVL-------LKNLIK 163
++ V + +D +L+N +Y +D L L L
Sbjct: 64 ---DAAIERAVATVVARFGRVD--ILVNL-ACTY--------LDDGLASSRADWLAAL-D 108
Query: 164 VNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLY 223
VN+ + QA P + R GAIVN S +A + +Y A+KA I Q +RS+
Sbjct: 109 VNLVSAAMLAQAAHPHL-ARGGGAIVNFTSISAKFAQTGRW--LYPASKAAIRQLTRSMA 165
Query: 224 VEYRKSGIDV 233
++ GI V
Sbjct: 166 MDLAPDGIRV 175
|
Length = 261 |
| >gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 66.7 bits (163), Expect = 1e-12
Identities = 59/199 (29%), Positives = 102/199 (51%), Gaps = 15/199 (7%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
L+TG + G+G++ A +LA G +++++ +P + + +D++ A K++ + F
Sbjct: 9 VLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAF-- 66
Query: 116 DLDEG------VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
D+ + ++ E LD+ L+NN GI+ A F E+ ++I VN++G
Sbjct: 67 DVRDFAATRAALDAGVEEFGRLDI--LVNNAGIATDAA--FAELSIEEWDDVIDVNLDGF 122
Query: 170 TKVTQAVLPGMLK-RKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
VTQA LP M++ R+ G IVNI S A + + YAA+KA + +++L E
Sbjct: 123 FNVTQAALPPMIRARRGGRIVNIASVAGVR--GNRGQVNYAASKAGLIGLTKTLANELAP 180
Query: 229 SGIDVQCQVPLYVATKMAS 247
GI V P + T MA
Sbjct: 181 RGITVNAVAPGAINTPMAD 199
|
Length = 249 |
| >gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 66.4 bits (163), Expect = 1e-12
Identities = 44/188 (23%), Positives = 73/188 (38%), Gaps = 33/188 (17%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAK-----TGLNLVLVGRNPDKLK----DVSDSIQAKYAK 103
G VTG GIG + A + G + + + DVSD+
Sbjct: 8 GKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQEDYPFATFVLDVSDAAA----- 62
Query: 104 TQIKSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIK 163
+ + +R+ LDV L+N GI A + +
Sbjct: 63 -------------VAQVCQRLLAETGPLDV--LVNAAGILRMGA--TDSLSDEDWQQTFA 105
Query: 164 VNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLY 223
VN G + +AV+P +++ GAIV +GS AA V P + + Y A+KA + ++ +
Sbjct: 106 VNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHV-PRIGM-AAYGASKAALTSLAKCVG 163
Query: 224 VEYRKSGI 231
+E G+
Sbjct: 164 LELAPYGV 171
|
Length = 252 |
| >gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 66.3 bits (162), Expect = 1e-12
Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 13/184 (7%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
ALVTG + GIGK+ A +LA+ G ++ + R+ ++ ++ I+A K V
Sbjct: 7 ALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDV 66
Query: 115 GDLDEGVERIKEAIEGLDVGVLINNV--GISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
+ E +I E LD V +NN G+ P E+++ + +N +
Sbjct: 67 EKIKEMFAQIDEEFGRLD--VFVNNAASGVLRPAM----ELEESHWDWTMNINAKALLFC 120
Query: 173 TQAVLPGMLKRKKGAIVNIGS-GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
Q M K G I+++ S G+ + + Y+ +KA ++ +R L VE GI
Sbjct: 121 AQEAAKLMEKVGGGKIISLSSLGSIRYLEN---YTTVGVSKAALEALTRYLAVELAPKGI 177
Query: 232 DVQC 235
V
Sbjct: 178 AVNA 181
|
Length = 250 |
| >gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 66.6 bits (163), Expect = 1e-12
Identities = 57/218 (26%), Positives = 94/218 (43%), Gaps = 16/218 (7%)
Query: 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
W +TG + G G+++ + G +V R+ L D+++ + + V D +
Sbjct: 6 W-FITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALD--VTDRA 62
Query: 115 GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARF--FHEVDQVLLKNLIKVNVEGTTKV 172
VE E LD+ ++NN G Y F EV + + I N G V
Sbjct: 63 AVFA-AVETAVEHFGRLDI--VVNNAG----YGLFGMIEEVTESEARAQIDTNFFGALWV 115
Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
TQAVLP + +++ G I+ I S I + P+ +Y A+K ++ S +L E + GI
Sbjct: 116 TQAVLPYLREQRSGHIIQISSIGGIS--AFPMSGIYHASKWALEGMSEALAQEVAEFGIK 173
Query: 233 VQCQVPLYVATKMA--SIKRSSFFVPSTDVYARAAMRW 268
V P +T A S KR++ + A +W
Sbjct: 174 VTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQW 211
|
Length = 275 |
| >gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4 | Back alignment and domain information |
|---|
Score = 65.6 bits (160), Expect = 1e-12
Identities = 52/204 (25%), Positives = 84/204 (41%), Gaps = 35/204 (17%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
ALVTG + GIG++ A L G + + R+ ++ + + + + D
Sbjct: 3 ALVTGASRGIGEATARLLHAEGYRVGICARDE---ARLAAAAAQELEG--VLGLAGDVRD 57
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINN--VGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
D+ V+ ++EA GLD L+NN VG+ P E + L L
Sbjct: 58 EADVRRAVDAMEEAFGGLD--ALVNNAGVGVMKPVEELTPE-EWRL--VLDTNLTGAFYC 112
Query: 172 VTQAVLPGMLKRKKGAIVNIGS---------GAAIVIPSDPLYSVYAATKAYIDQFSRSL 222
+ +A +L+R G IVN+GS GAA Y A+K + S +
Sbjct: 113 IHKAAPA-LLRRGGGTIVNVGSLAGKNAFKGGAA-----------YNASKFGLLGLSEAA 160
Query: 223 YVEYRKSGIDVQCQVPLYVATKMA 246
++ R++ I V +P V T A
Sbjct: 161 MLDLREANIRVVNVMPGSVDTGFA 184
|
This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226 |
| >gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 66.3 bits (162), Expect = 2e-12
Identities = 49/177 (27%), Positives = 93/177 (52%), Gaps = 8/177 (4%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
ALV G + GIG + A +LA G + L R +K +++ D I+A + + +D +
Sbjct: 13 ALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRA--DGGEAVAFPLDVT- 69
Query: 116 DLDEGVERIKEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
D D + +A E L ++ VL++ G +Y HE+ ++ +++++ G ++
Sbjct: 70 DPDSVKSFVAQAEEALGEIEVLVSGAGDTYFGK--LHEISTEQFESQVQIHLVGANRLAT 127
Query: 175 AVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
AVLPGM++R++G ++ +GS A+ P Y A KA ++ +L +E +G+
Sbjct: 128 AVLPGMIERRRGDLIFVGSDVALR--QRPHMGAYGAAKAGLEAMVTNLQMELEGTGV 182
|
Length = 274 |
| >gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 65.7 bits (160), Expect = 2e-12
Identities = 58/218 (26%), Positives = 89/218 (40%), Gaps = 53/218 (24%)
Query: 57 LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK--------------DVSDSIQAKYA 102
L+TG T GIGK A AK G ++ GRN L DV+D K A
Sbjct: 5 LITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAA 64
Query: 103 KTQIK---SVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK 159
+Q+ + + +GD E +D G VD L+
Sbjct: 65 LSQLPFIPELWIFNAGD-----------CEYMDDGK-----------------VDATLMA 96
Query: 160 NLIKVNVEGTTKVTQAVLPGMLKRKKGAIV-NIGSGAAIVIPSDPLYSVYAATKAYIDQF 218
+ VNV G + + P + + IV +I S A+ P Y A+KA + F
Sbjct: 97 RVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELAL-----PRAEAYGASKAAVAYF 151
Query: 219 SRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVP 256
+R+L ++ R GI+V P +VAT + +++F +P
Sbjct: 152 ARTLQLDLRPKGIEVVTVFPGFVATPLTD--KNTFAMP 187
|
Length = 240 |
| >gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 65.4 bits (160), Expect = 2e-12
Identities = 59/197 (29%), Positives = 95/197 (48%), Gaps = 9/197 (4%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G ALVTG + GIG++ A LA+ G ++++ R D + V+D+I A K + + +
Sbjct: 8 GKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIG 67
Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVL--LKNLIKVNVEGTT 170
+D I+E LD +L+NN + PY F H +D L + + VN+ G
Sbjct: 68 EMEQIDALFAHIRERHGRLD--ILVNNAAAN-PY--FGHILDTDLGAFQKTVDVNIRGYF 122
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
++ M ++ G+IVN+ S V P D +Y+ TKA + +++ E G
Sbjct: 123 FMSVEAGKLMKEQGGGSIVNVASVNG-VSPGD-FQGIYSITKAAVISMTKAFAKECAPFG 180
Query: 231 IDVQCQVPLYVATKMAS 247
I V +P TK AS
Sbjct: 181 IRVNALLPGLTDTKFAS 197
|
Length = 252 |
| >gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1 | Back alignment and domain information |
|---|
Score = 64.2 bits (157), Expect = 7e-12
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 23/187 (12%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLV--GRNPDKLKDVSDSIQAKYAKTQIKSVVVDF 113
AL+TG GIG++ A A+ G ++ + D ++ I+ + K +
Sbjct: 29 ALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEGRK------CLLI 82
Query: 114 SGDLD------EGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVE 167
GDL + V+ + + LD+ L+NN +P ++ L+ + N+
Sbjct: 83 PGDLGDESFCRDLVKEVVKEFGKLDI--LVNNAAYQHP-QESIEDITTEQLEKTFRTNIF 139
Query: 168 GTTKVTQAVLPGMLKRKKGA-IVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
+T+A LP + KKG+ I+N S A S L YAATK I F+R L ++
Sbjct: 140 SMFYLTKAALPHL---KKGSSIINTTSVTAYK-GSPHLLD-YAATKGAIVAFTRGLSLQL 194
Query: 227 RKSGIDV 233
+ GI V
Sbjct: 195 AEKGIRV 201
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270 |
| >gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 64.0 bits (156), Expect = 8e-12
Identities = 52/197 (26%), Positives = 87/197 (44%), Gaps = 18/197 (9%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G ALVTG G+G A LA G ++++ GRN L+ +++A + ++ D
Sbjct: 11 GQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAE--ALAFD 68
Query: 113 FSGD--LDEGVERIKEAIEGLDVGVLINNVGISYPYARF---FHEVDQVLLKNLIKVNVE 167
+ + + RI LD +L+NNVG AR E+D ++ L++ ++
Sbjct: 69 IADEEAVAAAFARIDAEHGRLD--ILVNNVG-----ARDRRPLAELDDAAIRALLETDLV 121
Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAA-IVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
+++ M ++ G I+ I S A + D +VY A K + R+L E+
Sbjct: 122 APILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGD---AVYPAAKQGLTGLMRALAAEF 178
Query: 227 RKSGIDVQCQVPLYVAT 243
GI P Y AT
Sbjct: 179 GPHGITSNAIAPGYFAT 195
|
Length = 256 |
| >gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 64.0 bits (156), Expect = 8e-12
Identities = 55/192 (28%), Positives = 85/192 (44%), Gaps = 12/192 (6%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
+VTG GIG++ A +LAK G +V+ N K + + + + + V
Sbjct: 9 VVVTGSGRGIGRAIAVRLAKEGSLVVV---NAKKRAEEMNETLKMVKENGGEGIGVLADV 65
Query: 116 DLDEGVERI-KEAIEGLD-VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
EG E + K I+ +L+NN G+ F VD L+ I + + +
Sbjct: 66 STREGCETLAKATIDRYGVADILVNNAGLG--LFSPFLNVDDKLIDKHISTDFKSVIYCS 123
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
Q + M R+ GAIVNI S A I P+ S+Y A KA + ++ L +E I V
Sbjct: 124 QELAKEM--REGGAIVNIASVAGIR-PA-YGLSIYGAMKAAVINLTKYLALEL-APKIRV 178
Query: 234 QCQVPLYVATKM 245
P +V TK+
Sbjct: 179 NAIAPGFVKTKL 190
|
Length = 252 |
| >gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 64.2 bits (157), Expect = 9e-12
Identities = 53/198 (26%), Positives = 86/198 (43%), Gaps = 21/198 (10%)
Query: 57 LVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPD-----KLKDVSDSIQAKYAKTQIKSVV 110
L+TG G G A +L G VL G + +L+ V +++++
Sbjct: 4 LITGCDSGFGNLLAKKLDSLGF-TVLAGCLTKNGPGAKELRRVCSD--------RLRTLQ 54
Query: 111 VDF--SGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEG 168
+D + + +KE + + L+NN GI + ++VN+ G
Sbjct: 55 LDVTKPEQIKRAAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLPMDDY-RKCMEVNLFG 113
Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
T +VT+A LP +L+R KG +VN+ S V P P Y A+KA ++ FS SL E +
Sbjct: 114 TVEVTKAFLP-LLRRAKGRVVNVSSMGGRV-PF-PAGGAYCASKAAVEAFSDSLRRELQP 170
Query: 229 SGIDVQCQVPLYVATKMA 246
G+ V P T +
Sbjct: 171 WGVKVSIIEPGNFKTGIT 188
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281 |
| >gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 63.0 bits (154), Expect = 2e-11
Identities = 57/181 (31%), Positives = 80/181 (44%), Gaps = 27/181 (14%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G LVTG T GIG A G +V+ GR + D A++ ++
Sbjct: 6 GRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAP---ETVDGRPAEFHAADVRD---- 58
Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARF------FHEVDQVLLKNLIKVNV 166
+ V+ I E LD VL+NN G S PYA FHE ++++N+
Sbjct: 59 -PDQVAALVDAIVERHGRLD--VLVNNAGGS-PYALAAEASPRFHE-------KIVELNL 107
Query: 167 EGTTKVTQAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
V QA M ++ G+IVNIGS + PS P + Y A KA + +RSL VE
Sbjct: 108 LAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRR-PS-PGTAAYGAAKAGLLNLTRSLAVE 165
Query: 226 Y 226
+
Sbjct: 166 W 166
|
Length = 252 |
| >gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 63.1 bits (154), Expect = 2e-11
Identities = 58/203 (28%), Positives = 89/203 (43%), Gaps = 29/203 (14%)
Query: 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKS- 108
R G AL+TG T GIG A Q G + + GR+P L + A+ ++
Sbjct: 3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASL---------EAARAELGES 53
Query: 109 --VVVDFSGDLD---EGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIK 163
V+ +GD+ + + EA LD V I N G++ + D+ +
Sbjct: 54 ALVIRADAGDVAAQKALAQALAEAFGRLDA-VFI-NAGVA--KFAPLEDWDEAMFDRSFN 109
Query: 164 VNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLY 223
NV+G + QA+LP +L ++N A I +P+ SVYAA+KA + +++L
Sbjct: 110 TNVKGPYFLIQALLP-LLANPASIVLNGSINAHIGMPNS---SVYAASKAALLSLAKTLS 165
Query: 224 VEYRKSGIDVQ------CQVPLY 240
E GI V Q PLY
Sbjct: 166 GELLPRGIRVNAVSPGPVQTPLY 188
|
Length = 249 |
| >gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10 | Back alignment and domain information |
|---|
Score = 62.8 bits (153), Expect = 2e-11
Identities = 42/180 (23%), Positives = 73/180 (40%), Gaps = 9/180 (5%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
A V G DG+G + A + A G ++ L R KL+ + I K+V D
Sbjct: 2 AAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAG-GSAKAVPTDARD 60
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
++ + I+E I L+ VL+ N G + E + + + ++ G
Sbjct: 61 EDEVIALFDLIEEEIGPLE--VLVYNAGANVW--FPILETTPRVFEKVWEMAAFGGFLAA 116
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
+ ML R +G I I +GA + ++ +A K + ++S+ E GI V
Sbjct: 117 REAAKRMLARGRGTI--IFTGATASLRGRAGFAAFAGAKFALRALAQSMARELGPKGIHV 174
|
This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238 |
| >gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 62.9 bits (153), Expect = 2e-11
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 17/171 (9%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
A+VTG + GIGK+ +L + G N++ + + D + V V
Sbjct: 9 AIVTGGSQGIGKAVVNRLKEEGSNVINFDIK-EPSYNDVDYFK----------VDVSNKE 57
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
+ +G++ + +D+ L+NN GI Y H V++ +I VNV G +++
Sbjct: 58 QVIKGIDYVISKYGRIDI--LVNNAGIE-SYGAI-HAVEEDEWDRIINVNVNGIFLMSKY 113
Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
+P MLK+ KG I+NI S + + + + Y +K + +RS+ V+Y
Sbjct: 114 TIPYMLKQDKGVIINIASVQSFAVTRNA--AAYVTSKHAVLGLTRSIAVDY 162
|
Length = 258 |
| >gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 62.4 bits (152), Expect = 3e-11
Identities = 53/190 (27%), Positives = 93/190 (48%), Gaps = 30/190 (15%)
Query: 57 LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
++TG + G+GK+ A + A+ G N+V+ GR +KL++ I+ Q+ +V +D
Sbjct: 5 IITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQ--FPGQVLTVQMDVRN- 61
Query: 117 LDEGVER-IKEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLL---KNLIKVNVEGTTK 171
E V++ +++ E + LINN F + + + ++I + + GT
Sbjct: 62 -PEDVQKMVEQIDEKFGRIDALINNAA-----GNFICPAEDLSVNGWNSVIDIVLNGTFY 115
Query: 172 VTQAVLPGMLKRK-KGAIVNI------GSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYV 224
+QAV +++ KG I+N+ +G VI S AA KA + +R+L V
Sbjct: 116 CSQAVGKYWIEKGIKGNIINMVATYAWDAGPG-VIHS-------AAAKAGVLAMTRTLAV 167
Query: 225 EY-RKSGIDV 233
E+ RK GI V
Sbjct: 168 EWGRKYGIRV 177
|
Length = 252 |
| >gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR | Back alignment and domain information |
|---|
Score = 62.1 bits (151), Expect = 3e-11
Identities = 47/197 (23%), Positives = 85/197 (43%), Gaps = 11/197 (5%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
A+VTG + GIG++ A +LA G ++ + + D+ +V + A + +
Sbjct: 4 AIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIYFQADIGEL 63
Query: 115 GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
D + +++ E LD L+NN GI+ ++ + LI +N+ G +TQ
Sbjct: 64 SDHEALLDQAWEDFGRLD--CLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGPFFLTQ 121
Query: 175 AVLPGMLKRKK------GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
AV M+++ +I+ + S A ++ P Y +KA + +R L
Sbjct: 122 AVARRMVEQPDRFDGPHRSIIFVTSINAYLV--SPNRGEYCISKAGLSMATRLLAYRLAD 179
Query: 229 SGIDVQCQVPLYVATKM 245
GI V P + T M
Sbjct: 180 EGIAVHEIRPGLIHTDM 196
|
This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255 |
| >gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Score = 62.5 bits (152), Expect = 3e-11
Identities = 57/200 (28%), Positives = 89/200 (44%), Gaps = 11/200 (5%)
Query: 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIK-- 107
R G ALVTG GIG+S K G + +V D ++V DS+ +
Sbjct: 15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCD 74
Query: 108 -SVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNV 166
+V D S +D V++ LD+ ++NN G++ P V+ + + VNV
Sbjct: 75 VTVEDDVSRAVDFTVDKFGT----LDI--MVNNAGLTGPPCPDIRNVELSEFEKVFDVNV 128
Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
+G + M+ KKG+IV++ S A+ + P Y +K + +RS+ E
Sbjct: 129 KGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGP--HAYTGSKHAVLGLTRSVAAEL 186
Query: 227 RKSGIDVQCQVPLYVATKMA 246
K GI V C P V T +A
Sbjct: 187 GKHGIRVNCVSPYAVPTALA 206
|
Length = 280 |
| >gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 61.9 bits (151), Expect = 3e-11
Identities = 53/211 (25%), Positives = 91/211 (43%), Gaps = 32/211 (15%)
Query: 57 LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
++TG G+G++ A LA+ G L L+ N +KL++ A + + + V D
Sbjct: 9 VITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEED 68
Query: 117 LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK----------------N 160
++ +I E L+ LINN GI D +L+K +
Sbjct: 69 VEATFAQIAEDFGQLN--GLINNAGILR---------DGLLVKAKDGKVTSKMSLEQFQS 117
Query: 161 LIKVNVEGTTKVTQAVLPGMLK-RKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFS 219
+I VN+ G + M++ KG I+NI S I + + Y+A+KA + +
Sbjct: 118 VIDVNLTGVFLCGREAAAKMIESGSKGVIINISS---IARAGNMGQTNYSASKAGVAAMT 174
Query: 220 RSLYVEYRKSGIDVQCQVPLYVATKM-ASIK 249
+ E + GI V P + T+M A++K
Sbjct: 175 VTWAKELARYGIRVAAIAPGVIETEMTAAMK 205
|
Length = 253 |
| >gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 61.5 bits (150), Expect = 4e-11
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 18/158 (11%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
AL+TG + GIG + A +LA T L+L GR ++L +++ + F
Sbjct: 6 ALITGASRGIGAAIARELAPTH-TLLLGGRPAERLDELAAEL----------PGATPFPV 54
Query: 116 DLDEGVERIKEAIEGLD-VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
DL + E I A+E L + VL++N G++ VD+ + ++VNV ++T+
Sbjct: 55 DLTDP-EAIAAAVEQLGRLDVLVHNAGVADLGPVAESTVDE--WRATLEVNVVAPAELTR 111
Query: 175 AVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATK 212
+LP L+ G +V I SGA + ++P + YAA+K
Sbjct: 112 LLLPA-LRAAHGHVVFINSGAG--LRANPGWGSYAASK 146
|
Length = 227 |
| >gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 60.9 bits (148), Expect = 9e-11
Identities = 44/178 (24%), Positives = 74/178 (41%), Gaps = 10/178 (5%)
Query: 57 LVTGPTDGIGKSFAFQLA---KTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDF 113
L+TG + GIG A +LA + R+ K + ++ A T ++++ +D
Sbjct: 4 LITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGT-LETLQLDV 62
Query: 114 SGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
+ V E + V VL+ N G+ D + ++ VNV GT ++
Sbjct: 63 CDS--KSVAAAVERVTERHVDVLVCNAGVGLLGPLEALSEDAM--ASVFDVNVFGTVRML 118
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
QA LP M +R G I+ S + P VY A+K ++ SL V+ +
Sbjct: 119 QAFLPDMKRRGSGRILVTSSVGGLQ--GLPFNDVYCASKFALEGLCESLAVQLLPFNV 174
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258 |
| >gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 60.5 bits (147), Expect = 1e-10
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 8/194 (4%)
Query: 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSV 109
R G A++TG GIG + A +LA G +V+ +P+ K +D + + T +
Sbjct: 4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDE 63
Query: 110 VVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
++ + E +D + NN GIS P + + VN+
Sbjct: 64 D-----AVNALFDTAAETYGSVD--IAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSV 116
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
+A LP M+++ KG+I+N S A++ + S Y A+K + SR L V++ +
Sbjct: 117 YLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQIS-YTASKGGVLAMSRELGVQFARQ 175
Query: 230 GIDVQCQVPLYVAT 243
GI V P V T
Sbjct: 176 GIRVNALCPGPVNT 189
|
Length = 255 |
| >gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated | Back alignment and domain information |
|---|
Score = 60.5 bits (147), Expect = 1e-10
Identities = 52/200 (26%), Positives = 86/200 (43%), Gaps = 14/200 (7%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
ALVTG GIG + A +L + G + +V N + + +D + K +V D S
Sbjct: 5 ALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAI--AVKADVS- 61
Query: 116 DLDEGVERIKEAIEGL-DVGVLINNVGI--SYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
D D+ +++ ++ D+ V++NN G+ + P E + +NV G
Sbjct: 62 DRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQ----FDKVYNINVGGVIWG 117
Query: 173 TQAVLPGMLKRKKGA-IVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
QA K G I+N S A +V +P +VY++TK + +++ + GI
Sbjct: 118 IQAAQEAFKKLGHGGKIINATSQAGVV--GNPELAVYSSTKFAVRGLTQTAARDLASEGI 175
Query: 232 DVQCQVPLYVATKM-ASIKR 250
V P V T M I
Sbjct: 176 TVNAYAPGIVKTPMMFDIAH 195
|
Length = 256 |
| >gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 60.5 bits (147), Expect = 1e-10
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 16/187 (8%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVV 111
G ++TG + G+G++ A + K +V+ R + ++ DV++ I+ A + +V
Sbjct: 7 GKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKK--AGGEAIAVKG 64
Query: 112 DFSGDLDEGVER-IKEAIE---GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVE 167
D + ++ V I+ A++ LDV +INN GI HE+ +I N+
Sbjct: 65 DVT--VESDVVNLIQTAVKEFGTLDV--MINNAGIENAVPS--HEMSLEDWNKVINTNLT 118
Query: 168 GTTKVTQAVLPGMLKR-KKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
G ++ + ++ KG I+N+ S IP PL+ YAA+K + + +L +EY
Sbjct: 119 GAFLGSREAIKYFVEHDIKGNIINMSS-VHEQIPW-PLFVHYAASKGGVKLMTETLAMEY 176
Query: 227 RKSGIDV 233
GI V
Sbjct: 177 APKGIRV 183
|
Length = 261 |
| >gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 60.2 bits (146), Expect = 2e-10
Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 13/169 (7%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
A+VTG G+G + A A+ G ++++ R +L +V++ I+A A + V D +
Sbjct: 13 AVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRA--AGRRAHVVAADLA- 69
Query: 116 DLDEGVERIKEAIEG---LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
+ +A+E LD +++NNVG + P L + NV +
Sbjct: 70 HPEATAGLAGQAVEAFGRLD--IVVNNVGGTMPNPLLSTSTKD--LADAFTFNVATAHAL 125
Query: 173 TQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSR 220
T A +P ML+ G+++NI S + + ++ Y KA + ++R
Sbjct: 126 TVAAVPLMLEHSGGGSVINISSTMGRL--AGRGFAAYGTAKAALAHYTR 172
|
Length = 263 |
| >gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 60.2 bits (146), Expect = 2e-10
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 5/193 (2%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
ALVT TDGIG + A +LA+ G ++V+ R + ++Q + V +
Sbjct: 13 ALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGTVCHVGKAE 72
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
D + V G+D +L++N ++ + ++V K L VNV+ T +T+A
Sbjct: 73 DRERLVATAVNLHGGVD--ILVSNAAVNPFFGNILDSTEEVWDKIL-DVNVKATALMTKA 129
Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
V+P M KR G++V + S AA P P Y +K + +++L E I V C
Sbjct: 130 VVPEMEKRGGGSVVIVSSVAAFH-PF-PGLGPYNVSKTALLGLTKNLAPELAPRNIRVNC 187
Query: 236 QVPLYVATKMASI 248
P + T +S
Sbjct: 188 LAPGLIKTSFSSA 200
|
This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256 |
| >gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 60.0 bits (146), Expect = 2e-10
Identities = 57/198 (28%), Positives = 88/198 (44%), Gaps = 30/198 (15%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G AL+TG GIG++ A AK G ++ +V + +D +++ Q + K +++
Sbjct: 46 GKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEH--EDANETKQRVEKEGV-KCLLI- 101
Query: 113 FSGDL------DEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNV 166
GD+ + VE + LD +L+NN YP + L K K N+
Sbjct: 102 -PGDVSDEAFCKDAVEETVRELGRLD--ILVNNAAFQYPQQSLEDITAEQLDKTF-KTNI 157
Query: 167 EGTTKVTQAVLPGMLKRKKG-AIVNIGS-----GAAIVIPSDPLYSVYAATKAYIDQFSR 220
+T+A LP + K+G AI+N GS G +I Y+ATK I F+R
Sbjct: 158 YSYFHMTKAALPHL---KQGSAIINTGSITGYEGNETLID-------YSATKGAIHAFTR 207
Query: 221 SLYVEYRKSGIDVQCQVP 238
SL + GI V P
Sbjct: 208 SLAQSLVQKGIRVNAVAP 225
|
Length = 290 |
| >gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family | Back alignment and domain information |
|---|
Score = 59.9 bits (145), Expect = 2e-10
Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 16/205 (7%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG--RNPDKLKDVSDSIQAKYAKT-----Q 105
G A +TG G G++ A +LA G +++ + + + +T
Sbjct: 3 GKVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLVEA 62
Query: 106 IKSVVVDFSGD---LDEGVERIKEAIEGLD-VGVLINNVGISYPYARFFHEVDQVLLKNL 161
+ V+ D L E +++ +E + V++ N G+ Y R E+ + +
Sbjct: 63 LGRKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVL-SYGRS-WELSEEQWDTV 120
Query: 162 IKVNVEGTTKVTQAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSR 220
+ +N+ G + +AV+P M++R G+I+ S A + + P + YAA K + ++
Sbjct: 121 LDINLTGVWRTCKAVVPHMIERGNGGSIIITSSVAGLK--ALPGLAHYAAAKHGLVGLTK 178
Query: 221 SLYVEYRKSGIDVQCQVPLYVATKM 245
+L E + GI V P V T M
Sbjct: 179 TLANELAEYGIRVNSIHPYSVDTPM 203
|
Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265 |
| >gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 59.4 bits (144), Expect = 3e-10
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 29/204 (14%)
Query: 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLV--GRNPDKLKDVSDSIQAKYAKTQIKSV 109
G A+VTG G+G+ +A LAK G ++++ G N D+ + + + K V
Sbjct: 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVT-----FV 68
Query: 110 VVDFSGDLDEGVERI-KEAIEGLD-VGVLINNVGI--SYPYARFFHE-VDQVLLKNLIKV 164
VD + E E++ KEA+E + +L+NN G P + E + V + +
Sbjct: 69 QVDLTK--PESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAV-----MDI 121
Query: 165 NVEGTTKVTQAVLPGMLKRKKGAIVNIGS----GAAIVIPSDPLYSVYAATKAYIDQFSR 220
N+ ++QAV M K+ G I+NI S +P+ Y A+K + ++
Sbjct: 122 NLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPA------YTASKHGVAGLTK 175
Query: 221 SLYVEYRKSGIDVQCQVPLYVATK 244
+ E I V P Y+ T
Sbjct: 176 AFANELAAYNIQVNAIAPGYIKTA 199
|
Length = 258 |
| >gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR) | Back alignment and domain information |
|---|
Score = 58.3 bits (141), Expect = 3e-10
Identities = 45/215 (20%), Positives = 66/215 (30%), Gaps = 57/215 (26%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
LVTG + GIG + A LA G VLV + VVV +
Sbjct: 1 VLVTGGSGGIGGAIARWLASRGSPKVLV--------------------VSRRDVVVHNAA 40
Query: 116 DLDEGVE--RIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
LD+G IE I+ NV GT ++
Sbjct: 41 ILDDGRLIDLTGSRIE------------------------------RAIRANVVGTRRLL 70
Query: 174 QAVLPGMLKRKKGAIVNIGS-GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
+A M ++ G + I S P YAA+KA +D ++ E +G+
Sbjct: 71 EAARELMKAKRLGRFILISSVAGLFGAPGL---GGYAASKAALDGLAQQWASEGWGNGLP 127
Query: 233 VQCQVPLYVATK-MASIKRSSFFVPSTDVYARAAM 266
A MA + + + M
Sbjct: 128 ATAVACGTWAGSGMAKGPVAPEEILGNRRHGVRTM 162
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186 |
| >gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 59.2 bits (144), Expect = 3e-10
Identities = 49/165 (29%), Positives = 75/165 (45%), Gaps = 12/165 (7%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVV 111
G ALVTG T G+G + A A+ G LV+ GRN +K + + ++A + V
Sbjct: 6 GKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEA--LGAKAVFVQA 63
Query: 112 DFSGDLDEGVERIKEAIEGLD-VGVLINNVGISYPYAR-FFHEVDQVLLKNLIKVNVEGT 169
D S D+++ + A E + L+N G++ R + L VNV
Sbjct: 64 DLS-DVEDCRRVVAAADEAFGRLDALVNAAGLT---DRGTILDTSPELFDRHFAVNVRAP 119
Query: 170 TKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYAATKA 213
+ Q + M +RK +G IVNIGS +A P + Y A+K
Sbjct: 120 FFLMQEAIKLMRRRKAEGTIVNIGSMSAHG--GQPFLAAYCASKG 162
|
Length = 260 |
| >gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 59.1 bits (143), Expect = 3e-10
Identities = 64/206 (31%), Positives = 95/206 (46%), Gaps = 32/206 (15%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNL-VLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
ALVTG + GIG++ A LA+ G + V +N ++V + I K + D S
Sbjct: 4 ALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKA--FVLQADIS 61
Query: 115 GDLDEG-VERIKEAIEGLD--VGVLINNVGISYPYARFFHEVDQVLLKNLI--KVNVEGT 169
DE V + AI+ D + L+NN GI + Q ++NL ++N +
Sbjct: 62 ---DENQVVAMFTAIDQHDEPLAALVNNAGILF---------TQCTVENLTAERINRVLS 109
Query: 170 TKVTQAVL--PGMLKR-------KKGAIVNIGSGAA-IVIPSDPLYSVYAATKAYIDQFS 219
T VT L +KR GAIVN+ S A+ + P + Y YAA+K ID +
Sbjct: 110 TNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGE--YVDYAASKGAIDTLT 167
Query: 220 RSLYVEYRKSGIDVQCQVPLYVATKM 245
L +E GI V C P ++ T+M
Sbjct: 168 TGLSLEVAAQGIRVNCVRPGFIYTEM 193
|
Length = 247 |
| >gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 58.9 bits (143), Expect = 4e-10
Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 21/189 (11%)
Query: 55 WALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKTQIKSVVVDF 113
LVTG + G+G + A A+ G +V+ ++ D + ++D + + +++ V D
Sbjct: 7 TVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDR--AIALQADVTDR 64
Query: 114 SGDLDEGVER-IKEAIE--GLDVGVLINNVGISY---PYAR-FFHEVDQVLLKNLIKVNV 166
E V+ A E G + ++NN + AR ++ + ++ +V
Sbjct: 65 -----EQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSV 119
Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSG--AAIVIPSDPLYSVYAATKAYIDQFSRSLYV 224
+G QA LPGM ++ G I+NIG+ V+P Y Y KA + +R+L
Sbjct: 120 KGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVP----YHDYTTAKAALLGLTRNLAA 175
Query: 225 EYRKSGIDV 233
E GI V
Sbjct: 176 ELGPYGITV 184
|
Length = 253 |
| >gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 58.9 bits (142), Expect = 5e-10
Identities = 49/194 (25%), Positives = 84/194 (43%), Gaps = 5/194 (2%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G AL+TG + GIGK A + G + + R+ D L+ ++D I K V
Sbjct: 9 GKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVS 68
Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
+ ++++ + G+D+ V N GI ++ + L NV G
Sbjct: 69 QHQQVTSMLDQVTAELGGIDIAVC--NAGIITVTPML--DMPLEEFQRLQNTNVTGVFLT 124
Query: 173 TQAVLPGMLKR-KKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
QA M+K+ + G I+N S + +I S Y A+KA + ++++ VE I
Sbjct: 125 AQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVELAPHKI 184
Query: 232 DVQCQVPLYVATKM 245
V P Y+ T++
Sbjct: 185 RVNSVSPGYILTEL 198
|
Length = 253 |
| >gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 58.5 bits (142), Expect = 5e-10
Identities = 54/196 (27%), Positives = 97/196 (49%), Gaps = 16/196 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNL-VLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
A+VT GIGK+ A LA+ G ++ + + + K+ ++ +++ + +I+ +D S
Sbjct: 5 AIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQ--LDLS 62
Query: 115 GDLDEGVERIKEAIEGLD-VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
DL EG + + + I+ L + VL+NN G F ++D + + V+V+G +
Sbjct: 63 -DLPEGAQALDKLIQRLGRIDVLVNNAGAM--TKAPFLDMDFDEWRKIFTVDVDGAFLCS 119
Query: 174 QAVLPGMLKRKKGA-IVNIGSGAAIV---IPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
Q M+K+ +G I+NI S V P P S Y A K + ++++ +E +
Sbjct: 120 QIAARHMVKQGQGGRIINITS----VHEHTPL-PGASAYTAAKHALGGLTKAMALELVEH 174
Query: 230 GIDVQCQVPLYVATKM 245
GI V P +AT M
Sbjct: 175 GILVNAVAPGAIATPM 190
|
Length = 256 |
| >gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 58.0 bits (141), Expect = 8e-10
Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 39/213 (18%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD-KLKDVSDSIQAKYAKTQIKSVVVDFS 114
ALVTG GIG A LA G +L + R D +L ++A + V+ F
Sbjct: 5 ALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVE------VIFFP 58
Query: 115 GDLDEG------VERIKEAIEGLDVGVLINNVGISYPYARFFHEV-----DQVLLKNLIK 163
D+ + ++ + A +D L+NN G+ ++ D+VL
Sbjct: 59 ADVADLSAHEAMLDAAQAAWGRID--CLVNNAGVGVKVRGDLLDLTPESFDRVL-----A 111
Query: 164 VNVEGTTKVTQAVLPGMLKRKK------GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQ 217
+N+ G +TQAV ML + + +IV + S AI++ P Y +KA +
Sbjct: 112 INLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMV--SPNRGEYCISKAGLSM 169
Query: 218 FSRSLYVEYRKSGI---DVQCQVPLYVATKMAS 247
++ + GI +V+ P + T M +
Sbjct: 170 AAQLFAARLAEEGIGVYEVR---PGLIKTDMTA 199
|
Length = 256 |
| >gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 58.0 bits (141), Expect = 8e-10
Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 24/201 (11%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
A++TG + GIG++ A A+ G +V+ R +L + I+A+ + V +G
Sbjct: 9 AIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGE------AVALAG 62
Query: 116 DL-DEG-----VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
D+ DE V E GLD+ NN G E+ + + N+
Sbjct: 63 DVRDEAYAKALVALAVERFGGLDIA--FNNAGTLGEMGP-VAEMSLEGWRETLATNLTSA 119
Query: 170 TKVTQAVLPGMLKRKKGAIV----NIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
+ +P ML R G+++ +G A P + YAA+KA + ++ L E
Sbjct: 120 FLGAKHQIPAMLARGGGSLIFTSTFVGHTAGF-----PGMAAYAASKAGLIGLTQVLAAE 174
Query: 226 YRKSGIDVQCQVPLYVATKMA 246
Y GI V +P T M
Sbjct: 175 YGAQGIRVNALLPGGTDTPMG 195
|
Length = 254 |
| >gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR | Back alignment and domain information |
|---|
Score = 58.0 bits (140), Expect = 9e-10
Identities = 52/195 (26%), Positives = 85/195 (43%), Gaps = 12/195 (6%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQ-AKYAKTQIKSVVV 111
G AL+TG GIG++FA + G + + N + + + I A A I V
Sbjct: 3 GKTALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIGPAACA---ISLDVT 59
Query: 112 DFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
D +D V + + +D +L+NN + + A + L +NV GT
Sbjct: 60 D-QASIDRCVAALVDRWGSID--ILVNNAAL-FDLAPIVDITRES-YDRLFAINVSGTLF 114
Query: 172 VTQAVLPGMLKRKKGA-IVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
+ QAV M+ + +G I+N+ S A + L VY ATKA + ++S + + G
Sbjct: 115 MMQAVARAMIAQGRGGKIINMASQAG--RRGEALVGVYCATKAAVISLTQSAGLNLIRHG 172
Query: 231 IDVQCQVPLYVATKM 245
I+V P V +
Sbjct: 173 INVNAIAPGVVDGEH 187
|
This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254 |
| >gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 57.8 bits (139), Expect = 9e-10
Identities = 54/204 (26%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVV 111
G ALVTG + GIG++ A +LA G L + G ++ ++ IQ+
Sbjct: 4 GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSA------F 57
Query: 112 DFSGDLD--EGVERIKEAIEG--------LDVGVLINNVGISYPYARFFHEVDQVLLKNL 161
+L+ GVE + +++ +LINN GI P A F E + +
Sbjct: 58 SIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIG-PGA-FIEETTEQFFDRM 115
Query: 162 IKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRS 221
+ VN + + Q L + R I+NI S A + S P + Y+ TK I+ + +
Sbjct: 116 VSVNAKAPFFIIQQALSRL--RDNSRIINISSAATRI--SLPDFIAYSMTKGAINTMTFT 171
Query: 222 LYVEYRKSGIDVQCQVPLYVATKM 245
L + GI V +P ++ T M
Sbjct: 172 LAKQLGARGITVNAILPGFIKTDM 195
|
Length = 252 |
| >gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 57.9 bits (140), Expect = 1e-09
Identities = 51/192 (26%), Positives = 81/192 (42%), Gaps = 9/192 (4%)
Query: 57 LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
LVTG GIGK A L G +++VGRNPDKL ++ I+A ++ D + D
Sbjct: 11 LVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVT-D 69
Query: 117 LDEGVERIKEAIE---GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
D+ + A L GV ++ G S +D + + +NV GT V
Sbjct: 70 EDQVARAVDAATAWHGRLH-GV-VHCAGGSETIGPITQ-IDSDAWRRTVDLNVNGTMYVL 126
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
+ +++ G+ V I S AA + + Y TK+ +D + E S + V
Sbjct: 127 KHAARELVRGGGGSFVGISSIAA--SNTHRWFGAYGVTKSAVDHLMKLAADELGPSWVRV 184
Query: 234 QCQVPLYVATKM 245
P + T +
Sbjct: 185 NSIRPGLIRTDL 196
|
Length = 276 |
| >gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 57.2 bits (138), Expect = 2e-09
Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 27/201 (13%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIK--SVV 110
G A++TG G+G+ A LAK G ++V VG + QA+ K +
Sbjct: 8 GKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAE------APETQAQVEALGRKFHFIT 61
Query: 111 VDFSG--DLDEGVERIKEAIEGLDVGVLINNVG-ISYPYARFFHEVDQVLLKNLIKVNVE 167
D D+D V + E + +D +LINN G I F D ++I +N +
Sbjct: 62 ADLIQQKDIDSIVSQAVEVMGHID--ILINNAGIIRRQDLLEFGNKD---WDDVININQK 116
Query: 168 GTTKVTQAVLPGMLKRKKGA-IVNIGS----GAAIVIPSDPLYSVYAATKAYIDQFSRSL 222
++QAV +K+ G I+NI S I +PS Y A+K+ + +R+L
Sbjct: 117 TVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPS------YTASKSAVMGLTRAL 170
Query: 223 YVEYRKSGIDVQCQVPLYVAT 243
E + I+V P Y+AT
Sbjct: 171 ATELSQYNINVNAIAPGYMAT 191
|
Length = 251 |
| >gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 56.6 bits (137), Expect = 3e-09
Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 12/184 (6%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G ALVTG GIG + A +LA G +V+ +P+ + V+ +A + V D
Sbjct: 1 GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVA---EAAQGGPRALGVQCD 57
Query: 113 FS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
+ + E+ GLD ++++N GI+ E + +N+ G
Sbjct: 58 VTSEAQVQSAFEQAVLEFGGLD--IVVSNAGIATSSP--IAETSLEDWNRSMDINLTGHF 113
Query: 171 KVTQAVLPGMLKRKKGA-IVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
V++ M + G IV S A V P P + Y+A KA +R L +E +
Sbjct: 114 LVSREAFRIMKSQGIGGNIVFNASKNA-VAPG-PNAAAYSAAKAAEAHLARCLALEGGED 171
Query: 230 GIDV 233
GI V
Sbjct: 172 GIRV 175
|
This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 56.5 bits (137), Expect = 3e-09
Identities = 52/199 (26%), Positives = 78/199 (39%), Gaps = 33/199 (16%)
Query: 57 LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
+VTG GIG + + +LA+ G V+ GR+ + + + ++ + D
Sbjct: 11 IVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTD-DAQ 69
Query: 117 LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQV------------LLKNLIKV 164
+ VE+ +D L+NN G++ D V L +NLI
Sbjct: 70 CRDAVEQTVAKFGRIDG--LVNNAGVN----------DGVGLEAGREAFVASLERNLIHY 117
Query: 165 NVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYV 224
V + LP LK +GAIVNI S A+ S YAA K +R V
Sbjct: 118 YV-----MAHYCLP-HLKASRGAIVNISSKTALTGQGGT--SGYAAAKGAQLALTREWAV 169
Query: 225 EYRKSGIDVQCQVPLYVAT 243
K G+ V +P V T
Sbjct: 170 ALAKDGVRVNAVIPAEVMT 188
|
Length = 258 |
| >gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 56.2 bits (136), Expect = 4e-09
Identities = 51/186 (27%), Positives = 83/186 (44%), Gaps = 11/186 (5%)
Query: 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKS 108
L G L+TG + GIG + A A G +L LV R+ D L+ ++ ++A + +
Sbjct: 3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHG-VDVAV 61
Query: 109 VVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEG 168
+D S E E++ +D +L+NN G + P +VD + ++ V G
Sbjct: 62 HALDLS--SPEAREQLAAEAGDID--ILVNNAG-AIP-GGGLDDVDDAAWRAGWELKVFG 115
Query: 169 TTKVTQAVLPGMLKRKKGAIVN-IGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
+T+ P M R G IVN IG+ D Y +A A + F+R+L +
Sbjct: 116 YIDLTRLAYPRMKARGSGVIVNVIGAAGENP---DADYICGSAGNAALMAFTRALGGKSL 172
Query: 228 KSGIDV 233
G+ V
Sbjct: 173 DDGVRV 178
|
Length = 259 |
| >gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 55.7 bits (135), Expect = 6e-09
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 23/194 (11%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSV-VV 111
G +V G T GI A A+ G N+ + R+ +K+ +Q + S V
Sbjct: 9 GKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVR 68
Query: 112 DFSGDLDEGVERIKEAIEGLDVGV-------LINNVGISYPYARFFHEVDQVLLKNLIKV 164
D++ ++ +I + +DV V G+S A F K ++ +
Sbjct: 69 DYAA-VEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMS---ANGF--------KTVVDI 116
Query: 165 NVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYV 224
++ GT V +A P +L+R +I+ I + A +P P+ + A KA +D +R+L +
Sbjct: 117 DLLGTFNVLKAAYP-LLRRPGASIIQISAPQA-FVPM-PMQAHVCAAKAGVDMLTRTLAL 173
Query: 225 EYRKSGIDVQCQVP 238
E+ GI V VP
Sbjct: 174 EWGPEGIRVNSIVP 187
|
Length = 264 |
| >gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Score = 55.4 bits (133), Expect = 6e-09
Identities = 60/206 (29%), Positives = 92/206 (44%), Gaps = 27/206 (13%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDF-- 113
A VTG GIG S +L K G +V G P+ + + K+ + Q K++ DF
Sbjct: 6 AYVTGGMGGIGTSICQRLHKDGFKVV-AGCGPNSPR------RVKWLEDQ-KALGFDFIA 57
Query: 114 ----SGDLD---EGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNV 166
GD D +++K + +DV L+NN GI+ F ++ + +I N+
Sbjct: 58 SEGNVGDWDSTKAAFDKVKAEVGEIDV--LVNNAGITRDVV--FRKMTREDWTAVIDTNL 113
Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY--SVYAATKAYIDQFSRSLYV 224
VT+ V+ GM++R G I+NI S V + + Y+ KA I F+ SL
Sbjct: 114 TSLFNVTKQVIDGMVERGWGRIINISS----VNGQKGQFGQTNYSTAKAGIHGFTMSLAQ 169
Query: 225 EYRKSGIDVQCQVPLYVATKMASIKR 250
E G+ V P Y+ T M R
Sbjct: 170 EVATKGVTVNTVSPGYIGTDMVKAIR 195
|
Length = 246 |
| >gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 54.8 bits (132), Expect = 1e-08
Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 10/195 (5%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
++TG + GIG + A A+ G + L N + +D ++++ + +++ V
Sbjct: 5 MIITGASRGIGAATALLAAERGYAVCL---NYLRNRDAAEAVVQAIRRQGGEALAVAADV 61
Query: 116 DLDEGVERIKEAI--EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
+ V R+ EA+ E + L+NN GI R ++D L + NV G+
Sbjct: 62 ADEADVLRLFEAVDRELGRLDALVNNAGILEAQMRL-EQMDAARLTRIFATNVVGSFLCA 120
Query: 174 QAVLPGMLKR---KKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
+ + M R + GAIVN+ S AA + S Y YAA+K ID + L E G
Sbjct: 121 REAVKRMSTRHGGRGGAIVNVSSMAA-RLGSPGEYIDYAASKGAIDTMTIGLAKEVAAEG 179
Query: 231 IDVQCQVPLYVATKM 245
I V P + T++
Sbjct: 180 IRVNAVRPGVIYTEI 194
|
Length = 248 |
| >gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 4e-08
Identities = 48/183 (26%), Positives = 75/183 (40%), Gaps = 31/183 (16%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP----DKLKDVSDSIQAKYAKTQIKSVVV 111
AL+TG IG + A L G + + D L ++++ S
Sbjct: 9 ALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRP-------GSAAA 61
Query: 112 DFSGDLDEG------VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVN 165
DL + V A LD L+NN YP + + +L N
Sbjct: 62 -LQADLLDPDALPELVAACVAAFGRLD--ALVNNASSFYPTP--LGSITEAQWDDLFASN 116
Query: 166 VEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD-PL--YSVYAATKAYIDQFSRSL 222
++ ++QA P L++++GAIVNI I ++ PL Y VY A KA ++ +RSL
Sbjct: 117 LKAPFFLSQAAAP-QLRKQRGAIVNI-----TDIHAERPLKGYPVYCAAKAALEMLTRSL 170
Query: 223 YVE 225
+E
Sbjct: 171 ALE 173
|
Length = 249 |
| >gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 53.2 bits (128), Expect = 4e-08
Identities = 50/185 (27%), Positives = 87/185 (47%), Gaps = 20/185 (10%)
Query: 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDF 113
+W +TG + G G+ +L G + R PD L D ++A+Y ++ + +D
Sbjct: 4 TW-FITGASSGFGRGMTERLLARGDRVAATVRRPDALDD----LKARYGD-RLWVLQLDV 57
Query: 114 --SGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARF--FHEVDQVLLKNLIKVNVEGT 169
S + V+R A+ +DV +++N G Y F E+ ++ I N+ G+
Sbjct: 58 TDSAAVRAVVDRAFAALGRIDV--VVSNAG----YGLFGAAEELSDAQIRRQIDTNLIGS 111
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGS-GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
+V +A LP + ++ G IV + S G I P +S+Y ATK I+ F ++ E
Sbjct: 112 IQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPG---FSLYHATKWGIEGFVEAVAQEVAP 168
Query: 229 SGIDV 233
GI+
Sbjct: 169 FGIEF 173
|
Length = 276 |
| >gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 52.6 bits (127), Expect = 6e-08
Identities = 68/251 (27%), Positives = 101/251 (40%), Gaps = 26/251 (10%)
Query: 58 VTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDL 117
+TG + GIG++ A + A+ G L LV R D L+ + + A+ + + V + L
Sbjct: 7 ITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKA-ARVSVYAADVRDADAL 65
Query: 118 DEGVERIKEAIEGLDVGVLINNVGIS-------YPYARFFHEVDQVLLKNLIKVNVEGTT 170
A DV +I N GIS F EV + N G
Sbjct: 66 AAAAADFIAAHGLPDV--VIANAGISVGTLTEEREDLAVFREV--------MDTNYFGMV 115
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIV-IPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
Q + M ++G +V I S A + +P YS A+KA ++ SL VE R +
Sbjct: 116 ATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYS---ASKAAAIKYLESLRVELRPA 172
Query: 230 GIDVQCQVPLYVATKMASIKRSSF-FVPSTDVYARAAMRWI--GYEPCCTPYWPHSFIWG 286
G+ V P Y+ T M + F+ D +A A R I G P W +
Sbjct: 173 GVRVVTIAPGYIRTPMTAHNPYPMPFLMDADRFAARAARAIARGRRFRVIP-WQMGVVAK 231
Query: 287 VLSILPEKLID 297
+L +LP L D
Sbjct: 232 LLRVLPRWLYD 242
|
Length = 257 |
| >gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 52.9 bits (127), Expect = 6e-08
Identities = 58/196 (29%), Positives = 91/196 (46%), Gaps = 19/196 (9%)
Query: 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSV 109
R G AL+TG GIG++ A A+ G ++ L P++ +D ++ +Q A+ +
Sbjct: 52 RLQGRKALITGADSGIGRATAIAFAREGADIAL-NYLPEEEQDAAEVVQLIQAEGR---K 107
Query: 110 VVDFSGDL-DEG-----VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIK 163
V GDL DE VER + + GLD +L+N G + ++ K
Sbjct: 108 AVALPGDLKDEAFCRQLVERAVKELGGLD--ILVNIAG-KQTAVKDIADITTEQFDATFK 164
Query: 164 VNVEGTTKVTQAVLPGMLKRKKGA-IVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSL 222
NV + +A +P + GA I+N GS + PS L YA+TKA I F+++L
Sbjct: 165 TNVYAMFWLCKAAIPHL---PPGASIINTGSIQSYQ-PSPTLLD-YASTKAAIVAFTKAL 219
Query: 223 YVEYRKSGIDVQCQVP 238
+ + GI V P
Sbjct: 220 AKQVAEKGIRVNAVAP 235
|
Length = 300 |
| >gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 52.4 bits (126), Expect = 6e-08
Identities = 48/208 (23%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK-LKDVSDSIQAKYAKTQIKSVVVDFS 114
++TG + G+G++ A QL + G +++ + R +K L +++ + +D
Sbjct: 4 VIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHS-----LDLQ 58
Query: 115 --GDLDEGVERIKEAIEGLDVG--VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
+L+ I +I+ +V LINN G+ P + L+ N + +N+
Sbjct: 59 DVHELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITN-VHLNLLAPM 117
Query: 171 KVTQAVLPGMLKRKKGA--IVNIGSGAAIVIPSDPLY--SVYAATKAYIDQFSRSLYVEY 226
+T + K K ++NI SGAA +P + S Y ++KA +D F++++ E
Sbjct: 118 ILTSTFMK-HTKDWKVDKRVINISSGAA----KNPYFGWSAYCSSKAGLDMFTQTVATEQ 172
Query: 227 RKS--GIDVQCQVPLYVATKMASIKRSS 252
+ + + P + T M + RSS
Sbjct: 173 EEEEYPVKIVAFSPGVMDTNMQAQIRSS 200
|
Length = 251 |
| >gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 51.9 bits (125), Expect = 8e-08
Identities = 43/175 (24%), Positives = 69/175 (39%), Gaps = 13/175 (7%)
Query: 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVV--D 112
ALVTG IG++ A LA G +V+ + + A + +V+V D
Sbjct: 2 VALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSE--AEAQRLKDELNAL-RNSAVLVQAD 58
Query: 113 FS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
S + V A D VL+NN YP + + L +N++
Sbjct: 59 LSDFAACADLVAAAFRAFGRCD--VLVNNASAFYPTPLG--QGSEDAWAELFGINLKAPY 114
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
+ QA + + G+I+NI A P Y Y +KA ++ +RS +E
Sbjct: 115 LLIQAFARRLAGSRNGSIINI-IDAMTDRPL-TGYFAYCMSKAALEGLTRSAALE 167
|
Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234 |
| >gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs | Back alignment and domain information |
|---|
Score = 52.2 bits (125), Expect = 8e-08
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 8/144 (5%)
Query: 57 LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG- 115
L+TG GIGK+ A +AK G + +V RN + ++ I+ + I +VD S
Sbjct: 5 LITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGNQNIFLHIVDMSDP 64
Query: 116 -DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
+ E VE KE EG + VLINN G E+ + L+ N GT +T
Sbjct: 65 KQVWEFVEEFKE--EGKKLHVLINNAGCMVNK----RELTEDGLEKNFATNTLGTYILTT 118
Query: 175 AVLPGMLKRKKGAIVNIGSGAAIV 198
++P + K + ++ + SG +V
Sbjct: 119 HLIPVLEKEEDPRVITVSSGGMLV 142
|
Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255 |
| >gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 52.0 bits (124), Expect = 8e-08
Identities = 50/204 (24%), Positives = 91/204 (44%), Gaps = 13/204 (6%)
Query: 47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQAKYAKTQ 105
KNL G ALVTG + GIG++ A +LA G L + GRN + I++ K
Sbjct: 2 KNLD--GKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAF 59
Query: 106 IKSVVVDFSGDLDEGVERIKEAIE----GLDVGVLINNVGISYPYARFFHEVDQVLLKNL 161
+ ++ + + VE++K ++ ++ +L+NN GI + + +
Sbjct: 60 LIEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGT--IENTTEEIFDEI 117
Query: 162 IKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRS 221
+ VN++ + Q LP L R +G ++NI S + + + Y +K ++ +
Sbjct: 118 MAVNIKAPFFLIQQTLP--LLRAEGRVINISSAEVRLGFTGSI--AYGLSKGALNTMTLP 173
Query: 222 LYVEYRKSGIDVQCQVPLYVATKM 245
L + GI V +P Y T +
Sbjct: 174 LAKHLGERGITVNTIMPGYTKTDI 197
|
Length = 254 |
| >gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 52.0 bits (125), Expect = 9e-08
Identities = 51/197 (25%), Positives = 81/197 (41%), Gaps = 21/197 (10%)
Query: 56 ALVTGPT--DGIGKSFAFQLAKTGLNLVL---------VGRNPDKLKDVSDSIQAKYAKT 104
ALVTG + +GIG + +LA G+++ + + V + +
Sbjct: 8 ALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGV 67
Query: 105 QIKSVVVDFSGDLDEGVERIKEAIE---GLDVGVLINNVGISYPYARFFHEVDQVLLKNL 161
+ + + +D S R+ A+ G D +LINN S E+ L
Sbjct: 68 RCEHMEIDLSQP--YAPNRVFYAVSERLG-DPSILINNAAYSTHTR--LEELTAEQLDKH 122
Query: 162 IKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRS 221
VNV T ++ A + G I+N+ SG ++ D L YAATK I+ F++S
Sbjct: 123 YAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMPDEL--AYAATKGAIEAFTKS 180
Query: 222 LYVEYRKSGIDVQCQVP 238
L E + GI V P
Sbjct: 181 LAPELAEKGITVNAVNP 197
|
Length = 256 |
| >gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 53.1 bits (128), Expect = 9e-08
Identities = 60/209 (28%), Positives = 88/209 (42%), Gaps = 26/209 (12%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
+VTG GIG+ A A+ G +V + + ++ I+A A V V
Sbjct: 318 VVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDV---S 374
Query: 116 DLDEGVERIKE---AIEGLDVGVLINNVGISYPYARFF-----HEVDQVLLKNLIKVNVE 167
D D +E E A G+ +++NN GI A F + D+VL VN+
Sbjct: 375 DADA-MEAFAEWVRAEHGV-PDIVVNNAGIG--MAGGFLDTSAEDWDRVL-----DVNLW 425
Query: 168 GTTKVTQAVLPGMLKRKKGA-IVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
G + M++R G IVN+ S AA PS L YA +KA + S L E
Sbjct: 426 GVIHGCRLFGRQMVERGTGGHIVNVASAAAYA-PSRSL-PAYATSKAAVLMLSECLRAEL 483
Query: 227 RKSGIDVQCQVPLYVATKMASIKRSSFFV 255
+GI V P +V T +I ++ F
Sbjct: 484 AAAGIGVTAICPGFVDT---NIVATTRFA 509
|
Length = 582 |
| >gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 51.6 bits (124), Expect = 1e-07
Identities = 52/182 (28%), Positives = 82/182 (45%), Gaps = 21/182 (11%)
Query: 57 LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
L+TG + GIG A +L + G ++ R PD DV A+ +++D D
Sbjct: 6 LITGCSSGIGLEAALELKRRGYRVLAACRKPD---DV-----ARMNSLGFTGILLDL--D 55
Query: 117 LDEGVERIKEAIEGLDVGVL---INNVGISYPYARF--FHEVDQVLLKNLIKVNVEGTTK 171
E VER + + L L NN G + + + + ++ N GT +
Sbjct: 56 DPESVERAADEVIALTDNRLYGLFNNAG----FGVYGPLSTISRQQMEQQFSTNFFGTHQ 111
Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
+T +LP ML +G IV S ++ S P YAA+K ++ +S +L +E R SGI
Sbjct: 112 LTMLLLPAMLPHGEGRIVMTSSVMGLI--STPGRGAYAASKYALEAWSDALRMELRHSGI 169
Query: 232 DV 233
V
Sbjct: 170 KV 171
|
Length = 256 |
| >gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 51.4 bits (123), Expect = 1e-07
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 23/199 (11%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G A+VTG G+G+ A LA+ G + +VG N + + + + A + S+ D
Sbjct: 10 GKVAVVTGCDTGLGQGMALGLAEAGCD--IVGINIVEPTETIEQVTA--LGRRFLSLTAD 65
Query: 113 FSG--DLDEGVERIKEAIEGLDVGVLINNVG-ISYPYARFFHEVDQVLLKNLIKVNVEGT 169
+ +ER +D +L+NN G I A F E D +++ +N++
Sbjct: 66 LRKIDGIPALLERAVAEFGHID--ILVNNAGLIRREDAIEFSEKD---WDDVMNLNIKSV 120
Query: 170 TKVTQAVLPGMLKRKKGA-IVNIGS----GAAIVIPSDPLYSVYAATKAYIDQFSRSLYV 224
++QA + + G I+NI S I +PS Y A+K+ + +R +
Sbjct: 121 FFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPS------YTASKSGVMGVTRLMAN 174
Query: 225 EYRKSGIDVQCQVPLYVAT 243
E+ K I+V P Y+AT
Sbjct: 175 EWAKHNINVNAIAPGYMAT 193
|
Length = 253 |
| >gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 51.5 bits (123), Expect = 2e-07
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 17/189 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
ALVTG GIG++ A A+ G + V + P + +D D ++ + K+V++ G
Sbjct: 52 ALVTGGDSGIGRAAAIAYAREGAD-VAISYLPVEEEDAQD-VKKIIEECGRKAVLL--PG 107
Query: 116 DL-DEG-----VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
DL DE V +A+ GLD+ L+ ++ P ++ + +NV
Sbjct: 108 DLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPD---IADLTSEQFQKTFAINVFAL 164
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
+TQ +P + KGA + S PS L YAATKA I +SR L + +
Sbjct: 165 FWLTQEAIPLL---PKGASIITTSSIQAYQPSPHLLD-YAATKAAILNYSRGLAKQVAEK 220
Query: 230 GIDVQCQVP 238
GI V P
Sbjct: 221 GIRVNIVAP 229
|
Length = 294 |
| >gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 50.8 bits (122), Expect = 2e-07
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 28/181 (15%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
A+VTG + G+G + A QL + G+ ++ V R+ A A ++ V +D S
Sbjct: 4 AIVTGHSRGLGAALAEQLLQPGIAVLGVARS-------RHPSLAAAAGERLAEVELDLSD 56
Query: 115 -----GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
L + ++G +LINN G P D + + +NV
Sbjct: 57 AAAAAAWLAGDLLA--AFVDGASRVLLINNAGTVEPIGPLATL-DAAAIARAVGLNVAAP 113
Query: 170 TKVTQAVL---PGMLKRKKGAIVNIGSGAAIVIPSDPL--YSVYAATKAYIDQFSRSLYV 224
+T A+ +R+ I++I SGAA + +SVY ATKA +D +R++ +
Sbjct: 114 LMLTAALAQAASDAAERR---ILHISSGAA----RNAYAGWSVYCATKAALDHHARAVAL 166
Query: 225 E 225
+
Sbjct: 167 D 167
|
Length = 243 |
| >gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 3e-07
Identities = 52/192 (27%), Positives = 75/192 (39%), Gaps = 15/192 (7%)
Query: 53 GSWALVTGPT--DGIGKSFAFQLAKTGLNLVLV-----GRNPDKLKDVSDSIQAKYAKTQ 105
A+VTG + DGIG + +LA+ G ++ + D + IQ + +
Sbjct: 6 NKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLK 65
Query: 106 IKSVVVDFSGDL---DEGVERIKEAIEGLDV-GVLINNVGISYPYARFFHEVDQVLLKNL 161
V DL D E + + E L +L+NN +Y F + L
Sbjct: 66 NGVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNA--AYSTNNDFSNLTAEELDKH 123
Query: 162 IKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRS 221
VNV TT ++ G K+ G I+N+ SG YAATK ID + S
Sbjct: 124 YMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQ--GPMVGELAYAATKGAIDALTSS 181
Query: 222 LYVEYRKSGIDV 233
L E GI V
Sbjct: 182 LAAEVAHLGITV 193
|
Length = 256 |
| >gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 50.4 bits (121), Expect = 3e-07
Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 20/174 (11%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDS-IQAKYAKTQIKSVVV 111
G A+VTG G+G + +L G +V++ + V+ ++ + S
Sbjct: 2 GLVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPGETVAKLGDNCRFVPVDVTSEK- 60
Query: 112 DFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQV----LLKNLIKVNVE 167
D+ + K LD +++N GI+ + + Q L + +I VN+
Sbjct: 61 ----DVKAALALAKAKFGRLD--IVVNCAGIAVAAKTYNKKGQQPHSLELFQRVINVNLI 114
Query: 168 GTTKVTQAVLPGMLKR------KKGAIVNIGSGAAIVIPSDPLYSVYAATKAYI 215
GT V + M K ++G I+N S AA + Y+A+K I
Sbjct: 115 GTFNVIRLAAGAMGKNEPDQGGERGVIINTASVAA--FEGQIGQAAYSASKGGI 166
|
HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252 |
| >gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 3e-07
Identities = 53/201 (26%), Positives = 79/201 (39%), Gaps = 27/201 (13%)
Query: 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIK 107
NLR G A++TG GIGK A A G ++V+ N D V D IQ +
Sbjct: 6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFAC 65
Query: 108 SVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVG------ISYPYARFFHEVDQVLLKNL 161
+ +L + + +D +L+NN G P A F +
Sbjct: 66 RCDITSEQELSALADFALSKLGKVD--ILVNNAGGGGPKPFDMPMADF---------RRA 114
Query: 162 IKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAA----IVIPSDPLYSVYAATKAYIDQ 217
++NV ++Q V P M K G I+ I S AA I + S YA++KA
Sbjct: 115 YELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTS------YASSKAAASH 168
Query: 218 FSRSLYVEYRKSGIDVQCQVP 238
R++ + + I V P
Sbjct: 169 LVRNMAFDLGEKNIRVNGIAP 189
|
Length = 255 |
| >gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 51.4 bits (123), Expect = 3e-07
Identities = 55/218 (25%), Positives = 89/218 (40%), Gaps = 26/218 (11%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
A VTG GIG+ A +LA G ++VL N + + V+ I ++ + ++ +D +
Sbjct: 417 AFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVT- 475
Query: 116 DLDEGVERIKEAIE-------GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEG 168
DE + +K A G+D +++NN GI+ + F Q N + + G
Sbjct: 476 --DE--QAVKAAFADVALAYGGVD--IVVNNAGIATS-SPFEETTLQEWQLN-LDILATG 527
Query: 169 TTKVTQAVLPGMLKRKKGA-IVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
V + M ++ G IV I S A+ + S Y+A KA +R L E
Sbjct: 528 YFLVAREAFRQMREQGLGGNIVFIASKNAVY--AGKNASAYSAAKAAEAHLARCLAAEGG 585
Query: 228 KSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAA 265
GI V P ++ + S RAA
Sbjct: 586 TYGIRVNTVNP-------DAVLQGSGIWDGEWREERAA 616
|
Length = 676 |
| >gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 49.3 bits (118), Expect = 8e-07
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 12/143 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
A+VTG + GIG + L + G ++ + GR+ ++L ++ K+ ++ + D
Sbjct: 11 AVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDV-- 68
Query: 116 DLDEG-VERIKEAIE----GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
LDE V A+E G+D +L+NN G + F D L ++
Sbjct: 69 -LDEADVAAFAAAVEARFGGVD--MLVNNAGQGR-VSTFADTTDDAWRDEL-ELKYFSVI 123
Query: 171 KVTQAVLPGMLKRKKGAIVNIGS 193
T+A LP + +IV + S
Sbjct: 124 NPTRAFLPLLRASAAASIVCVNS 146
|
Length = 265 |
| >gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 49.1 bits (117), Expect = 9e-07
Identities = 51/201 (25%), Positives = 85/201 (42%), Gaps = 29/201 (14%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G A+VTG GIGK + G +V D+ + A +A+ + ++
Sbjct: 1 GKVAIVTGGGHGIGKQICLDFLEAGDKVVFA--------DIDEERGADFAEAEGPNLFF- 51
Query: 113 FSGDL-DEG-----VERIKEAIEGLDVGVLINNVGISYP---YARFFHEVDQVLLKNLIK 163
GD+ DE V + E + +D VL+NN + E D++L
Sbjct: 52 VHGDVADETLVKFVVYAMLEKLGRID--VLVNNAARGSKGILSSLLLEEWDRIL-----S 104
Query: 164 VNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLY 223
VN+ G ++++ ++K KG I+NI S A S+P YAA+K + + +L
Sbjct: 105 VNLTGPYELSRYCRDELIK-NKGRIINIASTRA--FQSEPDSEAYAASKGGLVALTHALA 161
Query: 224 VEYRKSGIDVQCQVPLYVATK 244
+ I V C P ++ T
Sbjct: 162 MSLGPD-IRVNCISPGWINTT 181
|
This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242 |
| >gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 48.4 bits (115), Expect = 1e-06
Identities = 48/198 (24%), Positives = 85/198 (42%), Gaps = 11/198 (5%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G A++TG GIG + + A+ G +VL + L+ + ++A+ + V+ D
Sbjct: 6 GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE--GFDVHGVMCD 63
Query: 113 FSGDLDEGVERIKEAIEGL-DVGVLINNVGI--SYPYARFFHEVDQVLLKNLIKVNVEGT 169
+E EA L V V+ +N GI P H+ + +I V++ G+
Sbjct: 64 VR-HREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDD----WRWVIDVDLWGS 118
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
+A LP +L++ G V + A ++P+ L Y K + + +L E
Sbjct: 119 IHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGL-GAYGVAKYGVVGLAETLAREVTAD 177
Query: 230 GIDVQCQVPLYVATKMAS 247
GI V P+ V T + +
Sbjct: 178 GIGVSVLCPMVVETNLVA 195
|
Length = 275 |
| >gnl|CDD|180838 PRK07102, PRK07102, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 3e-06
Identities = 49/192 (25%), Positives = 75/192 (39%), Gaps = 14/192 (7%)
Query: 57 LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
L+ G T I ++ A + A G L L R+ ++L+ ++D ++A+ A + + +D D
Sbjct: 5 LIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGA-VAVSTHELDIL-D 62
Query: 117 LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAV 176
+ D+ VLI VG A + L + N EG + +
Sbjct: 63 TASHAAFLDSLPALPDI-VLI-AVGTLGDQAACEADPALALR--EFRTNFEGPIALLTLL 118
Query: 177 LPGMLKRKKGAIVNIGSGAAIVIPSD---PLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
R G IV I S A D VY + KA + F L KSG+ V
Sbjct: 119 ANRFEARGSGTIVGISSVAG-----DRGRASNYVYGSAKAALTAFLSGLRNRLFKSGVHV 173
Query: 234 QCQVPLYVATKM 245
P +V T M
Sbjct: 174 LTVKPGFVRTPM 185
|
Length = 243 |
| >gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 47.8 bits (114), Expect = 3e-06
Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 18/174 (10%)
Query: 58 VTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDL 117
+TG + GIG++ A A+ G LVL R+ + L+ V++ +A A ++ V D + D
Sbjct: 12 ITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGA--EVLVVPTDVT-DA 68
Query: 118 DEGVERIKEAIE-GLDVGVLINNVGISYPYARFFHEV-----DQVLLKNLIKVNVEGTTK 171
D+ +A G + V +NNVG+ F E +QV+ NLI G +
Sbjct: 69 DQVKALATQAASFGGRIDVWVNNVGVGAVGR--FEETPIEAHEQVIQTNLI-----GYMR 121
Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
A LP K+ G +N+ S + P + Y+A+K + FS +L E
Sbjct: 122 DAHAALPIFKKQGHGIFINMISLGGFA--AQPYAAAYSASKFGLRGFSEALRGE 173
|
Length = 330 |
| >gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 5e-06
Identities = 41/195 (21%), Positives = 78/195 (40%), Gaps = 17/195 (8%)
Query: 57 LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
L+TG IG + + + G ++ + + L ++ +S+ ++ ++ V +D +
Sbjct: 8 LITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQ 67
Query: 117 LDEGVERIKEAIEGLDVGVLINN-VGISYP----YARFFHEVDQVLLKNLIKVNVEGTTK 171
E +E I+ V +YP Y + F +V + +++ +
Sbjct: 68 --ESLEEFLSKSAE--KYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFL 123
Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS--------VYAATKAYIDQFSRSLY 223
+Q K+ G +VNI S +V P +Y YAA KA I ++ L
Sbjct: 124 FSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAGIIHLTKYLA 183
Query: 224 VEYRKSGIDVQCQVP 238
++ S I V C P
Sbjct: 184 KYFKDSNIRVNCVSP 198
|
Length = 256 |
| >gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 46.6 bits (111), Expect = 6e-06
Identities = 29/148 (19%), Positives = 57/148 (38%), Gaps = 21/148 (14%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
A+V G +G LA+ G + + N +K +V+ I A+Y + D +
Sbjct: 5 AVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATS 64
Query: 116 DLDEGVERIKEAIEGL--DVGVLINNVGI-------SYPYARFFHEVDQVLLKNLIKVNV 166
++ V + ++ + V +L+ N GI + F ++VN+
Sbjct: 65 --EQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDF---------DRSLQVNL 113
Query: 167 EGTTKVTQAVLPGMLKRK-KGAIVNIGS 193
G + M++ +G I+ I S
Sbjct: 114 VGYFLCAREFSRLMIRDGIQGRIIQINS 141
|
Length = 259 |
| >gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 46.4 bits (110), Expect = 6e-06
Identities = 46/202 (22%), Positives = 85/202 (42%), Gaps = 9/202 (4%)
Query: 46 AKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQ 105
A LR +VTG + GIG+ + G +V R + + +S +
Sbjct: 2 ASGLRYADKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQAL-ESELNRAGPGS 60
Query: 106 IKSVVVDFSGDLDEGVER-IKEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIK 163
K V D + + E ++ I +E + L+NN G P+ E ++L+
Sbjct: 61 CKFVPCDVTKE--EDIKTLISVTVERFGRIDCLVNNAGWHPPHQTT-DETSAQEFRDLLN 117
Query: 164 VNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLY 223
+N+ ++ LP L++ +G I+N+ S + + Y ATK I +++L
Sbjct: 118 LNLISYFLASKYALP-HLRKSQGNIINLSSLVGSIGQKQA--APYVATKGAITAMTKALA 174
Query: 224 VEYRKSGIDVQCQVPLYVATKM 245
V+ + G+ V C P + T +
Sbjct: 175 VDESRYGVRVNCISPGNIWTPL 196
|
These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261 |
| >gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 45.6 bits (108), Expect = 1e-05
Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 10/193 (5%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G A T + GIG A LA+ G +++L+ RN + LK + I+++ + + +V D
Sbjct: 8 GKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSE-SNVDVSYIVAD 66
Query: 113 FSGDLDEGVER-IKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
+ E +ER +KE + + + G P +F E+ + +K+ +
Sbjct: 67 LTK--REDLERTVKELKNIGEPDIFFFSTG--GPKPGYFMEMSMEDWEGAVKLLLYPAVY 122
Query: 172 VTQAVLPGMLKRKKGAIVNIGSGA-AIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
+T+A++P M ++ G I+ S A IP+ L +V + A R+L E G
Sbjct: 123 LTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMA---GLVRTLAKELGPKG 179
Query: 231 IDVQCQVPLYVAT 243
I V +P + T
Sbjct: 180 ITVNGIMPGIIRT 192
|
Length = 263 |
| >gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Score = 44.9 bits (106), Expect = 2e-05
Identities = 50/194 (25%), Positives = 87/194 (44%), Gaps = 14/194 (7%)
Query: 57 LVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
LVTG + GIG++ A +LA G + + + V +IQA+ + ++ F
Sbjct: 2 LVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNAR----LLQFDV 57
Query: 116 DLDEGVERIKEA-IE--GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
+ EA I G GV++ N GI+ A F + + +I N++G V
Sbjct: 58 ADRVACRTLLEADIAEHGAYYGVVL-NAGITRDAA--FPALSEEDWDIVIHTNLDGFYNV 114
Query: 173 TQ-AVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
+P + R+ G I+ + S + ++ + Y+A KA + +++L VE K I
Sbjct: 115 IHPCTMPMIRARQGGRIITLASVSGVMGNRGQVN--YSAAKAGLIGATKALAVELAKRKI 172
Query: 232 DVQCQVPLYVATKM 245
V C P + T+M
Sbjct: 173 TVNCIAPGLIDTEM 186
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239 |
| >gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 2e-05
Identities = 49/195 (25%), Positives = 82/195 (42%), Gaps = 35/195 (17%)
Query: 58 VTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD---KLK----DVSDSIQAKYAKTQIKSVV 110
+TG + GIGK+ A + A+ G N+V+ + + KL ++ I+A K V
Sbjct: 8 ITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGKALPCIVD 67
Query: 111 VDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKN---LIKVNVE 167
+ + VE+ E G+D+ L+NN A +K ++ VN
Sbjct: 68 IRDEDQVRAAVEKAVEKFGGIDI--LVNNAS-----AISLTGTLDTPMKRYDLMMGVNTR 120
Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY---SVYAATKAY-IDQFSRSLY 223
GT ++A LP + K K I+N+ S PL + AY + ++ S+
Sbjct: 121 GTYLCSKACLPYLKKSKNPHILNL---------SPPLNLNPKWFKNHTAYTMAKYGMSMC 171
Query: 224 V-----EYRKSGIDV 233
V E++ GI V
Sbjct: 172 VLGMAEEFKPGGIAV 186
|
This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243 |
| >gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 2e-05
Identities = 30/146 (20%), Positives = 47/146 (32%), Gaps = 38/146 (26%)
Query: 57 LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
++TG GIG + A L G ++ + D D
Sbjct: 3 VITGAASGIGAATAELLEDAGHTVIGIDLRE-----------------------ADVIAD 39
Query: 117 LD--EGVERIKEAIEGLDVGV---LINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
L EG + GV L+N G+ + ++KVN G
Sbjct: 40 LSTPEGRAAAIADVLARCSGVLDGLVNCAGVGGT----------TVAGLVLKVNYFGLRA 89
Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAI 197
+ +A+LP + K A V + S A
Sbjct: 90 LMEALLPRLRKGHGPAAVVVSSIAGA 115
|
Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 3e-05
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKY--AKTQIKSVV 110
G A+VTG +DG+G A +LA G ++L RN K + +I+ AK +++
Sbjct: 14 GKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRA-- 71
Query: 111 VDFSGDLDEGVERIKEAI--EGLDVGVLINNVGISYPYAR 148
+D S L V + E + EG + +LINN G+ P R
Sbjct: 72 LDLS-SLAS-VAALGEQLRAEGRPIHLLINNAGVMTPPER 109
|
Length = 313 |
| >gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 3e-05
Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 10/98 (10%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G A+VTG G+G A LA G ++VL RN DK K + I A + +D
Sbjct: 16 GRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELD 75
Query: 113 FSGDLDEGVERIKEAIEGLD-----VGVLINNVGISYP 145
+ L ++ A + L + +LINN G+ Y
Sbjct: 76 LT-SLAS----VRAAADALRAAYPRIDLLINNAGVMYT 108
|
Length = 306 |
| >gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase | Back alignment and domain information |
|---|
Score = 44.1 bits (105), Expect = 3e-05
Identities = 37/175 (21%), Positives = 71/175 (40%), Gaps = 15/175 (8%)
Query: 64 GIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS--GDLDEGV 121
I + A A+ G +VL P ++ + + +D + D+DE
Sbjct: 7 SIAWAIAKAAAEEGAEVVLTTWPP---ALRMGAVDELAKELPADVIPLDVTSDEDIDELF 63
Query: 122 ERIKEAIEGLDVGVLINNVGISYPYARF---FHEVDQVLLKNLIKVNVEGTTKVTQAVLP 178
E++KE +D L++++ +S P R + + + + ++ + +A P
Sbjct: 64 EKVKEDGGKIDF--LVHSIAMS-PEIRKGKPYLDTSREGFLKALDISAYSFISLAKAAKP 120
Query: 179 GMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
M + G+IV + AA + P Y KA ++ +R L E + GI V
Sbjct: 121 LM--NEGGSIVALSYIAAERVF--PGYGGMGVAKAALESLARYLAYELGRKGIRV 171
|
Length = 239 |
| >gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 43.7 bits (103), Expect = 4e-05
Identities = 41/173 (23%), Positives = 70/173 (40%), Gaps = 17/173 (9%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
AL+ G T GIG++ A LA G L+L GR+ L ++ + A + D +
Sbjct: 1 ALILGATGGIGRALARALAGRGWRLLLSGRDAGALAGLAAEVGA-------LARPADVAA 53
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
+L+ V + + + LD +L+ G + ++ N+ G V +
Sbjct: 54 ELE--VWALAQELGPLD--LLVYAAGAILGKP--LARTKPAAWRRILDANLTGAALVLKH 107
Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
L L +V +G+ +V P S YAA KA ++ + E R
Sbjct: 108 ALA--LLAAGARLVFLGAYPELV--MLPGLSAYAAAKAALEAYVEVARKEVRG 156
|
Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206 |
| >gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 43.7 bits (104), Expect = 5e-05
Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 44/215 (20%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD---KLK----DVSDSIQAKYAKTQ 105
G +TG + GIG + A + A+ G N+V+ + + KL ++ I+A A Q
Sbjct: 6 GKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEA--AGGQ 63
Query: 106 IKSVVVDFSGDLDEGVER-IKEAIE---GLDVGVLINNVGISYPYARFFHEVDQVLLKN- 160
+V D ++ V + +A+E G+D + +NN A + +K
Sbjct: 64 ALPLVGDVRD--EDQVAAAVAKAVERFGGID--ICVNNAS-----AINLTGTEDTPMKRF 114
Query: 161 --LIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL---------YSVYA 209
+ ++NV GT V+QA LP + K + I+ + S PL ++ Y
Sbjct: 115 DLMQQINVRGTFLVSQACLPHLKKSENPHILTL---------SPPLNLDPKWFAPHTAYT 165
Query: 210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVPL-YVAT 243
K + + L E+R GI V P +AT
Sbjct: 166 MAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIAT 200
|
Length = 273 |
| >gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 5e-05
Identities = 56/224 (25%), Positives = 93/224 (41%), Gaps = 38/224 (16%)
Query: 64 GIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS--GDLDEGV 121
GIG + A + + G +V+ + +L + +D + A+ ++++VV D + +D +
Sbjct: 29 GIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALI 88
Query: 122 ERIKEAIEGLDVGVLINNVGI--SYPYARFF-HEVDQVLLKNLIKVNVEGTTKVTQAVLP 178
+ E + LDV L+NN G+ P E +VL V + GT + T+A L
Sbjct: 89 DAAVERLGRLDV--LVNNAGLGGQTPVVDMTDDEWSRVL-----DVTLTGTFRATRAALR 141
Query: 179 GMLKRK-KGAIVNIGSGAAIVI--PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
M R G IVN S V+ + + YAA KA + +R +E + G+ +
Sbjct: 142 YMRARGHGGVIVNNAS----VLGWRAQHGQAHYAAAKAGVMALTRCSALEAAEYGVRINA 197
Query: 236 QVPLYVATKMASIKRSSFFVPST-----------DVYARAAMRW 268
P SI F T + + RAA W
Sbjct: 198 VAP--------SIAMHPFLAKVTSAELLDELAAREAFGRAAEPW 233
|
Length = 262 |
| >gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 5e-05
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 10/178 (5%)
Query: 57 LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
LVT + GIG + A +L K G +V+ RN + L+ ++ ++ +V D S D
Sbjct: 4 LVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELK---EYGEVYAVKADLS-D 59
Query: 117 LDEGVERIKEAIEGLD-VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
D+ +KEA E L + L+ N G HE +++ +T
Sbjct: 60 KDDLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTL 119
Query: 176 VLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYA-ATKAYIDQFSRSLYVEYRKSGI 231
++ L++K KG +V + S ++ P PL V A T+A + Q ++ + Y GI
Sbjct: 120 LIQAWLEKKMKGVLVYLSS-VSVKEPMPPL--VLADVTRAGLVQLAKGVSRTYGGKGI 174
|
Length = 259 |
| >gnl|CDD|133446 cd01078, NAD_bind_H4MPT_DH, NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 1e-04
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G A+V G T +G+ A LA+ G +VLVGR+ ++ + +DS++A++ V
Sbjct: 28 GKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF-----GEGVGA 82
Query: 113 FSGDLDEGVERIKEAIEGLDV 133
D R AI+G DV
Sbjct: 83 VETSDDA--ARA-AAIKGADV 100
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an alpha-beta-alpha configuration. NAD binding involves numerous hydrogen and van der Waals contacts. Length = 194 |
| >gnl|CDD|236326 PRK08655, PRK08655, prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 4e-04
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 57 LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSV----VVD 112
+ G T G+GK FA L + G +++ GR+P K K+V+ + +YA I + +V
Sbjct: 4 SIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEYANDNIDAAKDADIVI 63
Query: 113 FSGDLDEGVERIKE 126
S ++ + IKE
Sbjct: 64 ISVPINVTEDVIKE 77
|
Length = 437 |
| >gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 6e-04
Identities = 49/195 (25%), Positives = 88/195 (45%), Gaps = 12/195 (6%)
Query: 57 LVTGPTDGIGKSFAFQLAKTGLNL-VLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
L+TG + GIG++ A A G ++ + R+ ++ +D+++A A + V D +
Sbjct: 6 LITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRA--AGGRACVVAGDVAN 63
Query: 116 DLD--EGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
+ D + ++ A LD L+NN GI P + ++D L+ + NV G
Sbjct: 64 EADVIAMFDAVQSAFGRLD--ALVNNAGIVAP-SMPLADMDAARLRRMFDTNVLGAYLCA 120
Query: 174 QAVLPGMLKRK---KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
+ + + GAIVN+ S A+ + S Y YA +K +D + L E G
Sbjct: 121 REAARRLSTDRGGRGGAIVNVSSIAS-RLGSPNEYVDYAGSKGAVDTLTLGLAKELGPHG 179
Query: 231 IDVQCQVPLYVATKM 245
+ V P + T++
Sbjct: 180 VRVNAVRPGLIETEI 194
|
Length = 248 |
| >gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 7e-04
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 57 LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQA 99
LVTG + G+G+ A A G ++LV R+ KL+ V D+I
Sbjct: 10 LVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVE 52
|
Length = 239 |
| >gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 7e-04
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 16/95 (16%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G A+VTG G+G LA+ G ++++ R PD A+ A I V V
Sbjct: 26 GKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDV---------AREALAGIDGVEVV 76
Query: 113 FS--GDLD---EGVERIKEAIEGLDVGVLINNVGI 142
DL+ ER ++ +D +LINN G+
Sbjct: 77 MLDLADLESVRAFAERFLDSGRRID--ILINNAGV 109
|
Length = 315 |
| >gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.001
Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 25/200 (12%)
Query: 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSD----SIQAKYAKTQIKSVV 110
L+TG + GIG A L G + R + + + + Q YA+ +
Sbjct: 6 SILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPE----- 60
Query: 111 VDFSGDLDEGVERIKEAIEG-LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
+ V ++ E G LD L NN P A ++ L+ + N G
Sbjct: 61 -----SIAALVAQVLELSGGRLDA--LFNNGAYGQPGA--VEDLPTEALRAQFEANFFGW 111
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL--YSVYAATKAYIDQFSRSLYVEYR 227
+T+ V+P M K+ +G IV S +V P+ Y A+K I+ S +L +E +
Sbjct: 112 HDLTRRVIPVMRKQGQGRIVQCSSILGLV----PMKYRGAYNASKFAIEGLSLTLRMELQ 167
Query: 228 KSGIDVQCQVPLYVATKMAS 247
SGI V P + T+ +
Sbjct: 168 GSGIHVSLIEPGPIETRFRA 187
|
Length = 277 |
| >gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs | Back alignment and domain information |
|---|
Score = 38.2 bits (89), Expect = 0.003
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 14/92 (15%)
Query: 57 LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVV-DFSG 115
+TG +DG+G + A L G +VL R+ + D K A V++ D S
Sbjct: 11 FITGSSDGLGLAAARTLLHQGHEVVLHARSQKRAADA------KAACPGAAGVLIGDLS- 63
Query: 116 DLDEGVERIKE---AIEGLDVGVLINNVGISY 144
L E ++ + AI D +I+N GI
Sbjct: 64 SLAE-TRKLADQVNAIGRFD--AVIHNAGILS 92
|
Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260 |
| >gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 38.1 bits (89), Expect = 0.003
Identities = 42/201 (20%), Positives = 81/201 (40%), Gaps = 31/201 (15%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
AL+ G + G+G +L + G + R P + ++QA I+ +
Sbjct: 4 ALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQ----DTALQA-LPGVHIEKL------ 52
Query: 116 DLDE--GVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
D+++ ++++ + ++G +L N GIS P + + + L +T
Sbjct: 53 DMNDPASLDQLLQRLQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLF---------LT 103
Query: 174 QAVLPGMLKRKKGAIVNIGSG---------AAIVIPSDPLYSVYAATKAYIDQFSRSLYV 224
A+ P L R+ V G G ++ +P +Y A+KA ++ +RS
Sbjct: 104 NAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELPDGGEMPLYKASKAALNSMTRSFVA 163
Query: 225 EYRKSGIDVQCQVPLYVATKM 245
E + + V P +V T M
Sbjct: 164 ELGEPTLTVLSMHPGWVKTDM 184
|
Length = 225 |
| >gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding | Back alignment and domain information |
|---|
Score = 37.3 bits (87), Expect = 0.004
Identities = 22/92 (23%), Positives = 35/92 (38%), Gaps = 11/92 (11%)
Query: 57 LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKL---------KDVSDSIQAKYAKTQIK 107
V G T G+ +L G + + RNP K KD+ D A +
Sbjct: 2 AVIGATGKTGRRLVKELLARGHQVTALSRNPSKAPAPGVTPVQKDLFDLADLAEALAGVD 61
Query: 108 SVVVDFSGDLD--EGVERIKEAIEGLDVGVLI 137
+VV F D +GV+ + +A V ++
Sbjct: 62 AVVDAFGARPDDSDGVKHLLDAAARAGVRRIV 93
|
Length = 182 |
| >gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 37.8 bits (88), Expect = 0.004
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G ++TG GIGK A +LA+ G +++ R+ K ++ + I+ ++ +D
Sbjct: 1 GKTVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLD 60
Query: 113 FSGDLDEGVERIKEAIEGLD-VGVLINNVGI 142
+ L E + D + VLINN G+
Sbjct: 61 LA-SLKSIRAFAAEFLAEEDRLDVLINNAGV 90
|
Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274 |
| >gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 37.8 bits (88), Expect = 0.004
Identities = 56/181 (30%), Positives = 78/181 (43%), Gaps = 35/181 (19%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVL--VGRNPDKLKDVSDSIQAKYAKTQIKSVV 110
G A+VTG G+G++ A LA+ G +V+ V D DV D I+A AK
Sbjct: 12 GKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDA-SDVLDEIRAAGAK------A 64
Query: 111 VDFSGDL------DEGVERIKEAIEGLDVGVLINNVGISYPYARFF---HEVDQVLLKNL 161
V +GD+ DE V + GLD +++NN GI+ F E D V
Sbjct: 65 VAVAGDISQRATADELVA-TAVGLGGLD--IVVNNAGITRDRMLFNMSDEEWDAV----- 116
Query: 162 IKVNVEGTTKVTQAVLPGMLKRKK-------GAIVNIGSGAAIVIPSDPLYSVYAATKAY 214
I V++ G +T+ + K G IVN S A +V P + Y A KA
Sbjct: 117 IAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQ--ANYGAAKAG 174
Query: 215 I 215
I
Sbjct: 175 I 175
|
Length = 306 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 320 | |||
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 100.0 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 100.0 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 100.0 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 100.0 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 100.0 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 100.0 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 100.0 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 100.0 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 100.0 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 100.0 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 100.0 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 100.0 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 100.0 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 100.0 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 100.0 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 100.0 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 100.0 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 100.0 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 100.0 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 100.0 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 100.0 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 100.0 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 100.0 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 100.0 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 100.0 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 100.0 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 100.0 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 100.0 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 100.0 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 100.0 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 100.0 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 100.0 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 100.0 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 100.0 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 100.0 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 100.0 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 100.0 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 100.0 | |
| PRK08643 | 256 | acetoin reductase; Validated | 100.0 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 100.0 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 100.0 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 100.0 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 100.0 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 100.0 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 100.0 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 100.0 | |
| PRK05717 | 255 | oxidoreductase; Validated | 100.0 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 100.0 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 100.0 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 100.0 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 100.0 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 100.0 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 100.0 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 100.0 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 100.0 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 100.0 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 100.0 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 100.0 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 100.0 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.98 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.98 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.98 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.98 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.98 | |
| PLN00015 | 308 | protochlorophyllide reductase | 99.98 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.98 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.98 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.98 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.98 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.98 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.98 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.98 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.98 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.98 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.98 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.98 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.98 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.97 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.97 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.97 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.97 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.97 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.97 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.97 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.97 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.97 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.97 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.97 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.97 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.97 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.97 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.97 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.97 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.97 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.97 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 99.97 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.97 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.97 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.97 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 99.97 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.97 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.97 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.96 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.96 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.96 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.96 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.96 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.96 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.96 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.96 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.96 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.96 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.96 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.96 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.95 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.95 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.95 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.95 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.95 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.94 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 99.93 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 99.91 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 99.91 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 99.91 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 99.91 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.88 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.85 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.85 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.83 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.82 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.8 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 99.8 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.77 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 99.77 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.76 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.75 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.72 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.71 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.7 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.7 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.7 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.69 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.69 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.69 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.68 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.67 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.67 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.67 | |
| PF08643 | 299 | DUF1776: Fungal family of unknown function (DUF177 | 99.65 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.65 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.64 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.62 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.6 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.6 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.59 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.58 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.57 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.55 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.53 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.47 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.47 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.43 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.42 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.42 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.42 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.42 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.41 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.41 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.4 | |
| KOG4022 | 236 | consensus Dihydropteridine reductase DHPR/QDPR [Am | 99.4 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.39 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.39 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.38 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.37 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.37 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.36 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.36 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.35 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.28 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.28 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.27 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.27 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.19 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.13 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.09 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.06 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.03 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.02 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.01 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 98.94 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 98.93 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 98.92 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 98.91 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 98.87 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 98.85 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 98.82 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 98.8 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 98.74 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 98.71 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.7 | |
| COG4982 | 866 | 3-oxoacyl-[acyl-carrier protein] | 98.62 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 98.55 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 98.54 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 98.53 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 98.52 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 98.5 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 98.49 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 98.47 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 98.44 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 98.41 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 98.27 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 98.26 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 98.25 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 98.23 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 98.12 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 98.09 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 98.0 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 97.99 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 97.88 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 97.84 | |
| PLN00106 | 323 | malate dehydrogenase | 97.83 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 97.81 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.8 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 97.77 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 97.74 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 97.68 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 97.67 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 97.67 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 97.67 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 97.6 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 97.57 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 97.57 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.55 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 97.47 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 97.43 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 97.41 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 97.38 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 97.38 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 97.36 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 97.35 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 97.35 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 97.33 | |
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 97.32 | |
| PLN02520 | 529 | bifunctional 3-dehydroquinate dehydratase/shikimat | 97.28 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 97.27 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 97.17 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 97.13 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 97.12 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 97.06 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 97.04 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 97.03 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 97.02 | |
| TIGR02824 | 325 | quinone_pig3 putative NAD(P)H quinone oxidoreducta | 97.01 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 97.0 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 96.97 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 96.97 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 96.96 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 96.94 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 96.94 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 96.93 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 96.92 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 96.92 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 96.92 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 96.92 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 96.89 | |
| PRK14968 | 188 | putative methyltransferase; Provisional | 96.88 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 96.88 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 96.86 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 96.86 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 96.86 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 96.85 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 96.83 | |
| cd08268 | 328 | MDR2 Medium chain dehydrogenases/reductase (MDR)/z | 96.81 | |
| cd08244 | 324 | MDR_enoyl_red Possible enoyl reductase. Member ide | 96.78 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 96.78 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 96.76 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 96.73 | |
| PF12242 | 78 | Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2 | 96.73 | |
| COG2130 | 340 | Putative NADP-dependent oxidoreductases [General f | 96.69 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 96.65 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 96.64 | |
| cd05288 | 329 | PGDH Prostaglandin dehydrogenases. Prostaglandins | 96.64 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 96.57 | |
| PRK12480 | 330 | D-lactate dehydrogenase; Provisional | 96.56 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 96.56 | |
| PRK09310 | 477 | aroDE bifunctional 3-dehydroquinate dehydratase/sh | 96.56 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 96.55 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 96.54 | |
| PLN02928 | 347 | oxidoreductase family protein | 96.47 | |
| cd08292 | 324 | ETR_like_2 2-enoyl thioester reductase (ETR) like | 96.45 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 96.4 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 96.4 | |
| PRK08223 | 287 | hypothetical protein; Validated | 96.36 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 96.33 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 96.32 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 96.31 | |
| cd08239 | 339 | THR_DH_like L-threonine dehydrogenase (TDH)-like. | 96.3 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 96.29 | |
| cd05282 | 323 | ETR_like 2-enoyl thioester reductase-like. 2-enoyl | 96.27 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 96.26 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 96.26 | |
| PTZ00354 | 334 | alcohol dehydrogenase; Provisional | 96.25 | |
| cd05212 | 140 | NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom | 96.2 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 96.19 | |
| cd05286 | 320 | QOR2 Quinone oxidoreductase (QOR). Quinone oxidore | 96.18 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 96.18 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 96.18 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 96.17 | |
| cd01484 | 234 | E1-2_like Ubiquitin activating enzyme (E1), repeat | 96.17 | |
| cd08241 | 323 | QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t | 96.16 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 96.16 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 96.13 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 96.13 | |
| PLN02740 | 381 | Alcohol dehydrogenase-like | 96.09 | |
| TIGR02818 | 368 | adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr | 96.09 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.09 | |
| cd08250 | 329 | Mgc45594_like Mgc45594 gene product and other MDR | 96.07 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 96.01 | |
| PRK06436 | 303 | glycerate dehydrogenase; Provisional | 95.99 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 95.97 | |
| TIGR03451 | 358 | mycoS_dep_FDH mycothiol-dependent formaldehyde deh | 95.94 | |
| cd08291 | 324 | ETR_like_1 2-enoyl thioester reductase (ETR) like | 95.93 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 95.93 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 95.92 | |
| cd08297 | 341 | CAD3 Cinnamyl alcohol dehydrogenases (CAD). These | 95.92 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 95.91 | |
| cd08243 | 320 | quinone_oxidoreductase_like_1 Quinone oxidoreducta | 95.91 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 95.91 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.87 | |
| PF02737 | 180 | 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind | 95.87 | |
| PRK10754 | 327 | quinone oxidoreductase, NADPH-dependent; Provision | 95.86 | |
| PRK13982 | 475 | bifunctional SbtC-like/phosphopantothenoylcysteine | 95.86 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 95.83 | |
| TIGR03201 | 349 | dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co | 95.82 | |
| cd08233 | 351 | butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog | 95.81 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 95.8 | |
| cd08300 | 368 | alcohol_DH_class_III class III alcohol dehydrogena | 95.79 | |
| PRK08410 | 311 | 2-hydroxyacid dehydrogenase; Provisional | 95.79 | |
| cd08238 | 410 | sorbose_phosphate_red L-sorbose-1-phosphate reduct | 95.78 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 95.78 | |
| PRK06487 | 317 | glycerate dehydrogenase; Provisional | 95.72 | |
| PF00107 | 130 | ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: | 95.71 | |
| cd08281 | 371 | liver_ADH_like1 Zinc-dependent alcohol dehydrogena | 95.7 | |
| PLN03139 | 386 | formate dehydrogenase; Provisional | 95.69 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 95.68 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 95.67 | |
| cd08231 | 361 | MDR_TM0436_like Hypothetical enzyme TM0436 resembl | 95.66 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.66 | |
| cd08289 | 326 | MDR_yhfp_like Yhfp putative quinone oxidoreductase | 95.66 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 95.65 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 95.64 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 95.63 | |
| TIGR01751 | 398 | crot-CoA-red crotonyl-CoA reductase. The enzyme mo | 95.59 | |
| PRK12550 | 272 | shikimate 5-dehydrogenase; Reviewed | 95.58 | |
| PF02882 | 160 | THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl | 95.58 | |
| cd08246 | 393 | crotonyl_coA_red crotonyl-CoA reductase. Crotonyl- | 95.57 | |
| cd01488 | 291 | Uba3_RUB Ubiquitin activating enzyme (E1) subunit | 95.57 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 95.57 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 95.51 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 95.5 | |
| PF00670 | 162 | AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase | 95.49 | |
| PRK07411 | 390 | hypothetical protein; Validated | 95.47 | |
| PLN02494 | 477 | adenosylhomocysteinase | 95.45 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 95.44 | |
| cd08290 | 341 | ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi | 95.4 | |
| cd08301 | 369 | alcohol_DH_plants Plant alcohol dehydrogenase. NAD | 95.34 | |
| smart00829 | 288 | PKS_ER Enoylreductase. Enoylreductase in Polyketid | 95.32 | |
| PRK14179 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.31 | |
| PLN02827 | 378 | Alcohol dehydrogenase-like | 95.3 | |
| PRK06932 | 314 | glycerate dehydrogenase; Provisional | 95.29 | |
| PRK14967 | 223 | putative methyltransferase; Provisional | 95.28 | |
| PLN02602 | 350 | lactate dehydrogenase | 95.27 | |
| PF13241 | 103 | NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ | 95.25 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 95.25 | |
| cd08274 | 350 | MDR9 Medium chain dehydrogenases/reductase (MDR)/z | 95.25 | |
| PRK14188 | 296 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.23 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 95.21 | |
| PRK14851 | 679 | hypothetical protein; Provisional | 95.21 | |
| TIGR00561 | 511 | pntA NAD(P) transhydrogenase, alpha subunit. In so | 95.19 | |
| TIGR03366 | 280 | HpnZ_proposed putative phosphonate catabolism asso | 95.19 | |
| cd08251 | 303 | polyketide_synthase polyketide synthase. Polyketid | 95.18 | |
| cd08269 | 312 | Zn_ADH9 Alcohol dehydrogenases of the MDR family. | 95.18 | |
| cd08235 | 343 | iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ | 95.17 | |
| PRK14191 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.16 | |
| PRK07878 | 392 | molybdopterin biosynthesis-like protein MoeZ; Vali | 95.16 | |
| TIGR01381 | 664 | E1_like_apg7 E1-like protein-activating enzyme Gsa | 95.15 | |
| PRK14169 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.13 | |
| cd05285 | 343 | sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a | 95.12 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 95.11 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 95.11 | |
| cd05295 | 452 | MDH_like Malate dehydrogenase-like. These MDH-like | 95.11 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 95.07 | |
| cd08299 | 373 | alcohol_DH_class_I_II_IV class I, II, IV alcohol d | 95.07 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.04 | |
| cd00300 | 300 | LDH_like L-lactate dehydrogenase-like enzymes. Mem | 95.03 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 95.01 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 95.0 | |
| PRK10309 | 347 | galactitol-1-phosphate dehydrogenase; Provisional | 94.96 | |
| PRK14180 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.93 | |
| cd05195 | 293 | enoyl_red enoyl reductase of polyketide synthase. | 94.91 | |
| TIGR01724 | 341 | hmd_rel H2-forming N(5),N(10)-methenyltetrahydrome | 94.91 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 94.89 | |
| PF12076 | 164 | Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194 | 94.88 | |
| cd08284 | 344 | FDH_like_2 Glutathione-dependent formaldehyde dehy | 94.87 | |
| PRK15409 | 323 | bifunctional glyoxylate/hydroxypyruvate reductase | 94.85 | |
| TIGR01757 | 387 | Malate-DH_plant malate dehydrogenase, NADP-depende | 94.85 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 94.82 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 94.79 | |
| cd05280 | 325 | MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone | 94.77 | |
| cd08277 | 365 | liver_alcohol_DH_like Liver alcohol dehydrogenase. | 94.77 | |
| TIGR02817 | 336 | adh_fam_1 zinc-binding alcohol dehydrogenase famil | 94.76 |
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-55 Score=401.23 Aligned_cols=320 Identities=83% Similarity=1.341 Sum_probs=287.5
Q ss_pred CcccchhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcccccCCCEEEEECCCCcHHHHHHHHHHHcCCeE
Q 020854 1 MESCFLNTLKTQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNL 80 (320)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~vlITGas~GIG~ala~~l~~~G~~V 80 (320)
||-|||+.+.++|+|+.++.++|++.++..++.++.+++.++..|.++++.+|++++|||||+|||+++|++|+++|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~lITGAs~GIG~alA~~La~~G~~V 80 (320)
T PLN02780 1 MELCFVDKLKSQPLWLLVLFVLGSLSILKFFFTILNWVYVYFLRPAKNLKKYGSWALVTGPTDGIGKGFAFQLARKGLNL 80 (320)
T ss_pred CchhHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCEEEEeCCCcHHHHHHHHHHHHCCCCE
Confidence 78999999999999999999999999999999999999988887777777789999999999999999999999999999
Q ss_pred EEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHH
Q 020854 81 VLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKN 160 (320)
Q Consensus 81 il~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~ 160 (320)
++++|+.+++++..+++.+.+++.++..+.+|++++..+.++++.+.+++.|+|++|||||...+...++.+.+.+++++
T Consensus 81 il~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~ 160 (320)
T PLN02780 81 VLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKN 160 (320)
T ss_pred EEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHH
Confidence 99999999999999998876656678899999997667888888888888889999999998754334678899999999
Q ss_pred HHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccc
Q 020854 161 LIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLY 240 (320)
Q Consensus 161 ~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~ 240 (320)
++++|+.|++.+++.++|.|.+++.|+||++||.++...++.|+.+.|++||+|+++|+++|+.|++++||+|++|+||+
T Consensus 161 ~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~ 240 (320)
T PLN02780 161 LIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLY 240 (320)
T ss_pred HHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCc
Confidence 99999999999999999999988899999999999864323578899999999999999999999999999999999999
Q ss_pred eecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhhhhHhhhcC
Q 020854 241 VATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVLSILPEKLIDAGRLQFSIGIRKRGQLKDARKKE 320 (320)
Q Consensus 241 v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l~~~~P~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 320 (320)
|+|+|..........++||++|+.++++++.++...|++.+.+..++.+++|+++..+....+...+|++...|.++++|
T Consensus 241 v~T~~~~~~~~~~~~~~p~~~A~~~~~~~~~~~~~~p~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (320)
T PLN02780 241 VATKMASIRRSSFLVPSSDGYARAALRWVGYEPRCTPYWPHSLIWGLISALPESAVDSWRLKFCLQIRKKGQQKDSRKKE 320 (320)
T ss_pred eecCcccccCCCCCCCCHHHHHHHHHHHhCCCCccCCChHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 99999874334444679999999999999887778888999999999999999999999998888999999888776654
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-47 Score=331.19 Aligned_cols=245 Identities=31% Similarity=0.467 Sum_probs=221.4
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.+++++||||||+|||+++|++|+++|++|++++|++++++++.+++...+ +..+..+++|+++. +.+.++.+.+..
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~-~v~v~vi~~DLs~~--~~~~~l~~~l~~ 80 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT-GVEVEVIPADLSDP--EALERLEDELKE 80 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhh-CceEEEEECcCCCh--hHHHHHHHHHHh
Confidence 458999999999999999999999999999999999999999999998876 78899999999987 666677666554
Q ss_pred C--CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 131 L--DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 131 ~--~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
. +||+||||||++.. +++.+.+.++.++++++|+.++..++++++|.|.+++.|+||||+|.+|.. +.|..+.|
T Consensus 81 ~~~~IdvLVNNAG~g~~--g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~--p~p~~avY 156 (265)
T COG0300 81 RGGPIDVLVNNAGFGTF--GPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLI--PTPYMAVY 156 (265)
T ss_pred cCCcccEEEECCCcCCc--cchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcC--CCcchHHH
Confidence 3 78899999999876 789999999999999999999999999999999999999999999999999 78999999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc-------ccCCCCCCCHHHHHHHHHHHhCCC-CcccCCch
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI-------KRSSFFVPSTDVYARAAMRWIGYE-PCCTPYWP 280 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~-------~~~~~~~~~~~~~a~~i~~~l~~~-~~~~~~~~ 280 (320)
++||+++.+|+++|+.|++++||+|.+|+||+++|++++. ..+...+++||++|+.++.+++++ +.+.|..+
T Consensus 157 ~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~k~~ii~~~~ 236 (265)
T COG0300 157 SATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAKGSDVYLLSPGELVLSPEDVAEAALKALEKGKREIIPGLP 236 (265)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccccccccccccccchhhccCHHHHHHHHHHHHhcCCceEecChh
Confidence 9999999999999999999999999999999999999951 123445899999999999999997 77777777
Q ss_pred HHHHHHHHhhchHHHHHHHHHH
Q 020854 281 HSFIWGVLSILPEKLIDAGRLQ 302 (320)
Q Consensus 281 ~~~~~~l~~~~P~~~~~~~~~~ 302 (320)
........+.+|..+..++..+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~ 258 (265)
T COG0300 237 NKALALSFRLLPRSLREKLAGK 258 (265)
T ss_pred hHHHHHHHHHhHHHHHHHHHHH
Confidence 8888888899998888876654
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-46 Score=327.23 Aligned_cols=298 Identities=42% Similarity=0.675 Sum_probs=270.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh----c--cCCcccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Q 020854 19 LFTIGSLSVLRLAFVILNWVYVNF----L--RPAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD 92 (320)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~ 92 (320)
+..+|.+.+...+++++..++..+ + +|....+..|+|++|||||+|||++.|++||++|.+|++++|++++++.
T Consensus 9 ~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~ 88 (312)
T KOG1014|consen 9 LTLVGALVVSYVLYRVLRTIYNILKAYVFGVRPKDLKEKLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEA 88 (312)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHeeeeeecchHHhcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 456666666666666666655322 2 2333334678999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHH
Q 020854 93 VSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172 (320)
Q Consensus 93 ~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l 172 (320)
+++|+.+.++ ..+..+.+|.+++.. ..+++.+.+.+.|+.+||||+|...+.+..+.+.+.+.+++++++|.++...+
T Consensus 89 v~kEI~~~~~-vev~~i~~Dft~~~~-~ye~i~~~l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~ 166 (312)
T KOG1014|consen 89 VAKEIEEKYK-VEVRIIAIDFTKGDE-VYEKLLEKLAGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLL 166 (312)
T ss_pred HHHHHHHHhC-cEEEEEEEecCCCch-hHHHHHHHhcCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHH
Confidence 9999999885 899999999998744 67999999999999999999999987678888999989999999999999999
Q ss_pred HHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCC
Q 020854 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSS 252 (320)
Q Consensus 173 ~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~ 252 (320)
++.++|.|.++++|-|||+||.+|.. +.|.++.|++||+++..|+++|+.|+..+||.|.++.|++|.|+|.....+.
T Consensus 167 t~~ilp~M~~r~~G~IvnigS~ag~~--p~p~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~~~s 244 (312)
T KOG1014|consen 167 TQLILPGMVERKKGIIVNIGSFAGLI--PTPLLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYRKPS 244 (312)
T ss_pred HHHhhhhhhcCCCceEEEeccccccc--cChhHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccccccCCCC
Confidence 99999999999999999999999999 8999999999999999999999999999999999999999999999988889
Q ss_pred CCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhhhhHhhhcC
Q 020854 253 FFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVLSILPEKLIDAGRLQFSIGIRKRGQLKDARKKE 320 (320)
Q Consensus 253 ~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l~~~~P~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 320 (320)
.+.++||..|+..++.++.....++++.|.+...+..++|.|+.++....+..++|.+..+|+++++|
T Consensus 245 l~~ps~~tfaksal~tiG~~~~TtGy~~H~i~~~~~~~~p~~~~~~~~~~~~~~~R~~al~~~~~~~~ 312 (312)
T KOG1014|consen 245 LFVPSPETFAKSALNTIGNASETTGYLNHAIQVLLITLLPLWILDRLAHKLFLSIRIAALAKKAKKPK 312 (312)
T ss_pred CcCcCHHHHHHHHHhhcCCcccCCCccchHHHHHHHHHhHHHHHHHHHHHHhHHHHHHHHhhhhccCC
Confidence 99999999999999999988889999999999999999999999999998889999999999998875
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-46 Score=322.03 Aligned_cols=247 Identities=25% Similarity=0.276 Sum_probs=215.2
Q ss_pred cccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHH
Q 020854 47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERI 124 (320)
Q Consensus 47 ~~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~ 124 (320)
+..+.+|++||||||++|||+++|.+|+++|+++++.|.|.+..++++++++.. .+++.+.||++|. +....+++
T Consensus 32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~---g~~~~y~cdis~~eei~~~a~~V 108 (300)
T KOG1201|consen 32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI---GEAKAYTCDISDREEIYRLAKKV 108 (300)
T ss_pred chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc---CceeEEEecCCCHHHHHHHHHHH
Confidence 445677999999999999999999999999999999999999999999999875 2899999999984 45677778
Q ss_pred HHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCC
Q 020854 125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL 204 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~ 204 (320)
++++| ++|+||||||+... .++.+.+++++++++++|+.|+++.+|+|+|.|.++++||||+++|.+|.. +.++
T Consensus 109 k~e~G--~V~ILVNNAGI~~~--~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~--g~~g 182 (300)
T KOG1201|consen 109 KKEVG--DVDILVNNAGIVTG--KKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLF--GPAG 182 (300)
T ss_pred HHhcC--CceEEEeccccccC--CCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhccc--CCcc
Confidence 88888 57799999999875 678889999999999999999999999999999999999999999999999 7899
Q ss_pred chhhHHHHHHHHHHHHHHHHHHc---cCCceEEEEeccceecCCCccccC---CCCCCCHHHHHHHHHHHhCCC-CcccC
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYR---KSGIDVQCQVPLYVATKMASIKRS---SFFVPSTDVYARAAMRWIGYE-PCCTP 277 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~---~~gi~v~~v~PG~v~T~~~~~~~~---~~~~~~~~~~a~~i~~~l~~~-~~~~~ 277 (320)
..+||+||+|+.+|+++|..|+. .+||+.++|+|++++|+|+....+ -.+..+|+++|+.|++++.++ +....
T Consensus 183 l~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~~~~~~l~P~L~p~~va~~Iv~ai~~n~~~~~~ 262 (300)
T KOG1201|consen 183 LADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDGATPFPTLAPLLEPEYVAKRIVEAILTNQAGLLI 262 (300)
T ss_pred chhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCCCCCCccccCCCCHHHHHHHHHHHHHcCCccccc
Confidence 99999999999999999999986 457999999999999999985222 234789999999999999998 44455
Q ss_pred CchHHHHHHHHhhchHHHHHHHHHHH
Q 020854 278 YWPHSFIWGVLSILPEKLIDAGRLQF 303 (320)
Q Consensus 278 ~~~~~~~~~l~~~~P~~~~~~~~~~~ 303 (320)
+.....+..+.+++|..+ ..++.++
T Consensus 263 P~~~~~~~~l~~~lP~~~-~~l~~~F 287 (300)
T KOG1201|consen 263 PPFYYLFVPLLRLLPYKA-LLLMLDF 287 (300)
T ss_pred HHHHHHHHHHHhhCCHHH-HHHHHHH
Confidence 555567777889999877 4444433
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-43 Score=297.24 Aligned_cols=215 Identities=31% Similarity=0.407 Sum_probs=191.1
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
+++|+++|||||||||.++|++|++.|++|++++|+.++++++++++.+ ..+.....|++|. ++..++.+.+++
T Consensus 4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~----~~~~~~~~DVtD~~~~~~~i~~~~~~~ 79 (246)
T COG4221 4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA----GAALALALDVTDRAAVEAAIEALPEEF 79 (246)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc----CceEEEeeccCCHHHHHHHHHHHHHhh
Confidence 4589999999999999999999999999999999999999999998853 5689999999985 355667777777
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
++ +|+||||||.... .++.+.+.++|++|+++|+.|.++.+++++|.|.+++.|+|||+||++|.. +.|+.+.|
T Consensus 80 g~--iDiLvNNAGl~~g--~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~--~y~~~~vY 153 (246)
T COG4221 80 GR--IDILVNNAGLALG--DPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRY--PYPGGAVY 153 (246)
T ss_pred Cc--ccEEEecCCCCcC--ChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccc--cCCCCccc
Confidence 75 5599999999875 789999999999999999999999999999999999999999999999999 89999999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc-c-----------cCCCCCCCHHHHHHHHHHHhCCCCcc
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI-K-----------RSSFFVPSTDVYARAAMRWIGYEPCC 275 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~-~-----------~~~~~~~~~~~~a~~i~~~l~~~~~~ 275 (320)
|++|+|+.+|++.|+.|+..++|||.+|+||.+.|..+.. . .......+|+++|+.+...+.++..+
T Consensus 154 ~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~~~~~l~p~dIA~~V~~~~~~P~~v 232 (246)
T COG4221 154 GATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYKGGTALTPEDIAEAVLFAATQPQHV 232 (246)
T ss_pred hhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhccCCCCCHHHHHHHHHHHHhCCCcc
Confidence 9999999999999999999999999999999997776542 1 12334689999999999998887543
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-43 Score=310.54 Aligned_cols=242 Identities=29% Similarity=0.362 Sum_probs=196.8
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
.++.||+|+|||||+|||+++|++|+++|++++++.|..++++...+++++..+..+++.+++|++|. +++.++++..
T Consensus 8 e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~ 87 (282)
T KOG1205|consen 8 ERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIR 87 (282)
T ss_pred HHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHH
Confidence 35779999999999999999999999999999999999999999999998887655799999999985 3566677777
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
.+++.| +||||||+... ...++.+.+++..+|++|++|+.+++++++|+|++++.||||++||++|.. +.|..+
T Consensus 88 ~fg~vD--vLVNNAG~~~~--~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~--~~P~~~ 161 (282)
T KOG1205|consen 88 HFGRVD--VLVNNAGISLV--GFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKM--PLPFRS 161 (282)
T ss_pred hcCCCC--EEEecCccccc--cccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccccc--CCCccc
Confidence 788655 99999999873 678888999999999999999999999999999999889999999999999 778888
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCC--ceEEEEeccceecCCCccc---c-C---CCCCCCHHHHHH--HHHHHhCCC---
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSG--IDVQCQVPLYVATKMASIK---R-S---SFFVPSTDVYAR--AAMRWIGYE--- 272 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~g--i~v~~v~PG~v~T~~~~~~---~-~---~~~~~~~~~~a~--~i~~~l~~~--- 272 (320)
.|++||+|+.+|+++|+.|+.+.+ |++ +|+||+|+|++.... . . ......+++.+. ++...+.++
T Consensus 162 ~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 240 (282)
T KOG1205|consen 162 IYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKELLGEEGKSQQGPFLRTEDVADPEAVAYAISTPPCR 240 (282)
T ss_pred ccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchhhccccccccccchhhhhhhhhHHHHHHHHhcCccc
Confidence 999999999999999999999887 566 999999999987631 1 1 112233343332 444444443
Q ss_pred ---CcccCCchHHHHHHHHhhchHHHHH
Q 020854 273 ---PCCTPYWPHSFIWGVLSILPEKLID 297 (320)
Q Consensus 273 ---~~~~~~~~~~~~~~l~~~~P~~~~~ 297 (320)
.....+.+..+..++....|+....
T Consensus 241 ~~~~~~~~p~~~~~~~~~~~~~p~~~~~ 268 (282)
T KOG1205|consen 241 QVEDIIIAPSWEKLAFLLRTLCPELLFW 268 (282)
T ss_pred chhheeecccccchhhhhhhhcchHHHh
Confidence 2334444555666667777775443
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-40 Score=268.78 Aligned_cols=225 Identities=21% Similarity=0.247 Sum_probs=198.7
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
++.|+++||||++|||+++++.|++.|++|++.+++....++++..+.. ......+.||+++. ++..++++.+.+
T Consensus 12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g---~~~h~aF~~DVS~a~~v~~~l~e~~k~~ 88 (256)
T KOG1200|consen 12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGG---YGDHSAFSCDVSKAHDVQNTLEEMEKSL 88 (256)
T ss_pred HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCC---CCccceeeeccCcHHHHHHHHHHHHHhc
Confidence 5689999999999999999999999999999999999988888887743 24567899999985 244456666666
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhc--CCCcEEEEEcCccccccCCCCCch
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK--RKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~--~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
+ .+++||||||+..+ ..+..+..++|++.+.+|+.|.|.++|++...|.. +.+++|||+||+.|.. +.-+..
T Consensus 89 g--~psvlVncAGItrD--~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGki--GN~GQt 162 (256)
T KOG1200|consen 89 G--TPSVLVNCAGITRD--GLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKI--GNFGQT 162 (256)
T ss_pred C--CCcEEEEcCccccc--cceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccc--ccccch
Confidence 6 46699999999886 67888999999999999999999999999998543 3355999999999999 788999
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHH
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWG 286 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~ 286 (320)
.|++||+++.+|+++.++|++.+|||||.|.||++.|||+.. -|+++.+.|+..++.+|...+++++.++.|
T Consensus 163 nYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~--------mp~~v~~ki~~~iPmgr~G~~EevA~~V~f 234 (256)
T KOG1200|consen 163 NYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEA--------MPPKVLDKILGMIPMGRLGEAEEVANLVLF 234 (256)
T ss_pred hhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhh--------cCHHHHHHHHccCCccccCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999985 477899999999999999999999999999
Q ss_pred HHhhch
Q 020854 287 VLSILP 292 (320)
Q Consensus 287 l~~~~P 292 (320)
|.+-+.
T Consensus 235 LAS~~s 240 (256)
T KOG1200|consen 235 LASDAS 240 (256)
T ss_pred Hhcccc
Confidence 886443
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-39 Score=287.14 Aligned_cols=234 Identities=21% Similarity=0.239 Sum_probs=192.7
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++..+.+|++|. ++..++++.
T Consensus 4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~- 81 (263)
T PRK08339 4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSES-NVDVSYIVADLTKREDLERTVKELK- 81 (263)
T ss_pred cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHHHH-
Confidence 34679999999999999999999999999999999999999888888876543 35688899999986 233444442
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
+++ ++|++|||||.... .++.+.+.++|++++++|+.+++.+++.++|.|++++.|+||++||.++.. +.++..
T Consensus 82 ~~g--~iD~lv~nag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~--~~~~~~ 155 (263)
T PRK08339 82 NIG--EPDIFFFSTGGPKP--GYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKE--PIPNIA 155 (263)
T ss_pred hhC--CCcEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccC--CCCcch
Confidence 344 46799999998654 567889999999999999999999999999999988889999999999987 678889
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcccc---CCCCCCCHHHHHHHHHHHhCCCCcccCCchHHH
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKR---SSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSF 283 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~---~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~ 283 (320)
.|+++|+|+.+|+++|+.|++++||+||+|+||+++|+|..... ......++++..+.+.+.++.++...|.++...
T Consensus 156 ~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~ 235 (263)
T PRK08339 156 LSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYL 235 (263)
T ss_pred hhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHHHHHH
Confidence 99999999999999999999999999999999999999864210 011122344555566666667788889999988
Q ss_pred HHHHHhh
Q 020854 284 IWGVLSI 290 (320)
Q Consensus 284 ~~~l~~~ 290 (320)
+.++++-
T Consensus 236 v~fL~s~ 242 (263)
T PRK08339 236 VAFLASD 242 (263)
T ss_pred HHHHhcc
Confidence 8887764
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-38 Score=289.83 Aligned_cols=240 Identities=22% Similarity=0.237 Sum_probs=204.7
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
++.+|++||||||+|||++++++|+++|++|++++|+.+++++..+++++. +..+..+.+|++|. +++.++++.+.
T Consensus 4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~~~~~~~ 81 (330)
T PRK06139 4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL--GAEVLVVPTDVTDADQVKALATQAASF 81 (330)
T ss_pred CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHh
Confidence 356899999999999999999999999999999999999999988888764 45688889999985 24444555554
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
++. +|++|||||.... +++.+.+.+++++++++|+.|++++++.++|+|.+++.|+||++||..+.. +.|+.+.
T Consensus 82 ~g~--iD~lVnnAG~~~~--~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~--~~p~~~~ 155 (330)
T PRK06139 82 GGR--IDVWVNNVGVGAV--GRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFA--AQPYAAA 155 (330)
T ss_pred cCC--CCEEEECCCcCCC--CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcC--CCCCchh
Confidence 454 6699999998754 668899999999999999999999999999999988889999999999988 6788999
Q ss_pred hHHHHHHHHHHHHHHHHHHccC-CceEEEEeccceecCCCcc--------ccCCCCCCCHHHHHHHHHHHhCCC-CcccC
Q 020854 208 YAATKAYIDQFSRSLYVEYRKS-GIDVQCQVPLYVATKMASI--------KRSSFFVPSTDVYARAAMRWIGYE-PCCTP 277 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~-gi~v~~v~PG~v~T~~~~~--------~~~~~~~~~~~~~a~~i~~~l~~~-~~~~~ 277 (320)
|++||+|+.+|+++|+.|+.+. ||+|++|+||+++|++... ..+.....+||++|+.++..+..+ +.+.+
T Consensus 156 Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~pe~vA~~il~~~~~~~~~~~~ 235 (330)
T PRK06139 156 YSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYTGRRLTPPPPVYDPRRVAKAVVRLADRPRATTTV 235 (330)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccccccccccccCCCCCCCHHHHHHHHHHHHhCCCCEEEc
Confidence 9999999999999999999875 8999999999999998642 112334679999999999999876 55677
Q ss_pred CchHHHHHHHHhhchHHHHH
Q 020854 278 YWPHSFIWGVLSILPEKLID 297 (320)
Q Consensus 278 ~~~~~~~~~l~~~~P~~~~~ 297 (320)
.+...+..++..++|.++..
T Consensus 236 g~~~~~~~~~~~~~P~~~~~ 255 (330)
T PRK06139 236 GAAARLARLAHFLAPGLTAR 255 (330)
T ss_pred ChHHHHHHHHHHhCcHHHHH
Confidence 77888888888999975443
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-38 Score=278.72 Aligned_cols=238 Identities=18% Similarity=0.159 Sum_probs=197.1
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHcCC
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEGL 131 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~ 131 (320)
++++||||++|||+++|++|+ +|++|++++|+.+++++..+++++.+ ...+..+++|++|. +++.++++.+.+++
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~- 77 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRG-ATSVHVLSFDAQDLDTHRELVKQTQELAGE- 77 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcc-CCceEEEEcccCCHHHHHHHHHHHHHhcCC-
Confidence 579999999999999999999 59999999999999999988887653 33577899999985 24555555555554
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccccCCCCCchhhHH
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYAA 210 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~a 210 (320)
+|++|||||...+ .+..+.+.+.+.+++++|+.+++.+++.++|.|.+++ +|+||++||.++.. +.++...|++
T Consensus 78 -id~lv~nag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~--~~~~~~~Y~a 152 (246)
T PRK05599 78 -ISLAVVAFGILGD--QERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWR--ARRANYVYGS 152 (246)
T ss_pred -CCEEEEecCcCCC--chhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEecccccc--CCcCCcchhh
Confidence 6699999998654 3355667778889999999999999999999998764 69999999999987 6778899999
Q ss_pred HHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCC---cccCCchHHHHHHH
Q 020854 211 TKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEP---CCTPYWPHSFIWGV 287 (320)
Q Consensus 211 sKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~---~~~~~~~~~~~~~l 287 (320)
||+|+.+|+++|+.|+.++||+|++|+||+++|+|.....+.....+||++|+.++..+..+. ..........+.++
T Consensus 153 sKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~pe~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (246)
T PRK05599 153 TKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMKPAPMSVYPRDVAAAVVSAITSSKRSTTLWIPGRLRVLAWI 232 (246)
T ss_pred HHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCCCCCCCCCCHHHHHHHHHHHHhcCCCCceEEeCccHHHHHHH
Confidence 999999999999999999999999999999999997653333344699999999999998763 22333345668888
Q ss_pred HhhchHHHHHHH
Q 020854 288 LSILPEKLIDAG 299 (320)
Q Consensus 288 ~~~~P~~~~~~~ 299 (320)
.+++|.+++.++
T Consensus 233 ~~~~p~~~~~~~ 244 (246)
T PRK05599 233 MRLVPRPIWRKM 244 (246)
T ss_pred HHhCcHHHHHhc
Confidence 999999888753
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=281.24 Aligned_cols=246 Identities=23% Similarity=0.308 Sum_probs=205.5
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
.+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.. +..+..+.+|++|. +++.++++.+
T Consensus 5 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~ 81 (296)
T PRK05872 5 TSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG---DDRVLTVVADVTDLAAMQAAAEEAVE 81 (296)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC---CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 456799999999999999999999999999999999999998888777642 45677788999985 2445555556
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
.++. +|+||||||.... .++.+.+.+++++++++|+.|++++++.++|.|.++ .|+||++||.++.. +.++..
T Consensus 82 ~~g~--id~vI~nAG~~~~--~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~ 154 (296)
T PRK05872 82 RFGG--IDVVVANAGIASG--GSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVSSLAAFA--AAPGMA 154 (296)
T ss_pred HcCC--CCEEEECCCcCCC--cCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEeCHhhcC--CCCCch
Confidence 5664 6699999998764 678899999999999999999999999999998764 58999999999988 678899
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcccc---------------CCCCCCCHHHHHHHHHHHhCC
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKR---------------SSFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~---------------~~~~~~~~~~~a~~i~~~l~~ 271 (320)
.|++||+++++|+++|+.|++++||+|++|+||+++|+|..... +.....+|+++|+.++..+..
T Consensus 155 ~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~i~~~~~~ 234 (296)
T PRK05872 155 AYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAAAFVDGIER 234 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999865311 123457999999999999987
Q ss_pred C-CcccCCchHHHHHHHHhhchHHHHHHHHHHHH
Q 020854 272 E-PCCTPYWPHSFIWGVLSILPEKLIDAGRLQFS 304 (320)
Q Consensus 272 ~-~~~~~~~~~~~~~~l~~~~P~~~~~~~~~~~~ 304 (320)
+ +.++..++..+...+.+.+|.++..+...++.
T Consensus 235 ~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 268 (296)
T PRK05872 235 RARRVYAPRWVRLMQWLRPVLVTRLGQREVRRFV 268 (296)
T ss_pred CCCEEEchHHHHHHHHhchHHHHHHHHHHHHhhh
Confidence 6 45555555666667778888888887766543
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=273.88 Aligned_cols=240 Identities=18% Similarity=0.132 Sum_probs=196.1
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcC-CeEEEEeCCHHH-HHHHHHHHHhhcCCceEEEEEEeCCCCc--HHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDK-LKDVSDSIQAKYAKTQIKSVVVDFSGDL--DEGVERIKE 126 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G-~~Vil~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~D~~~~~--~~~~~~~~~ 126 (320)
-++++++||||++|||+++|++|+++| ++|++++|+.++ +++..++++..+ ..+++.+++|++|.. ++.++++.+
T Consensus 6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~ 84 (253)
T PRK07904 6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAG-ASSVEVIDFDALDTDSHPKVIDAAFA 84 (253)
T ss_pred CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcC-CCceEEEEecCCChHHHHHHHHHHHh
Confidence 358999999999999999999999995 899999999886 888888887643 346889999999851 233343333
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
.+ ++|++|||+|...+... ...+.+...+++++|+.+++.+++.++|.|.+++.++||++||..+.. +.++..
T Consensus 85 -~g--~id~li~~ag~~~~~~~--~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~--~~~~~~ 157 (253)
T PRK07904 85 -GG--DVDVAIVAFGLLGDAEE--LWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGER--VRRSNF 157 (253)
T ss_pred -cC--CCCEEEEeeecCCchhh--cccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcC--CCCCCc
Confidence 23 57799999998653111 122445566789999999999999999999988889999999998876 567778
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCC-CcccCCchHHHHH
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYE-PCCTPYWPHSFIW 285 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~-~~~~~~~~~~~~~ 285 (320)
.|++||+|+.+|+++|+.|+.++||+|++|+||+++|++..........++|+++|+.+++.+..+ ..+.......+..
T Consensus 158 ~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~A~~i~~~~~~~~~~~~~~~~~~~~~ 237 (253)
T PRK07904 158 VYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAKEAPLTVDKEDVAKLAVTAVAKGKELVWAPPAFRYVM 237 (253)
T ss_pred chHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCCCCCCCCCHHHHHHHHHHHHHcCCCEEEEChhHHHHH
Confidence 899999999999999999999999999999999999999875444445689999999999999887 4455555667788
Q ss_pred HHHhhchHHHHHH
Q 020854 286 GVLSILPEKLIDA 298 (320)
Q Consensus 286 ~l~~~~P~~~~~~ 298 (320)
.+.+++|.+++++
T Consensus 238 ~~~~~~p~~~~~~ 250 (253)
T PRK07904 238 MVLRHIPRPIFRK 250 (253)
T ss_pred HHHHhCCHHHHhh
Confidence 8899999988765
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=272.69 Aligned_cols=241 Identities=20% Similarity=0.261 Sum_probs=202.2
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++|++++|||||||||++++++|+++|++|++++|+.+++++..+++. .+..+.+|++|. +++.++.+.+.
T Consensus 2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~~ 75 (273)
T PRK07825 2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG------LVVGGPLDVTDPASFAAFLDAVEAD 75 (273)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc------cceEEEccCCCHHHHHHHHHHHHHH
Confidence 3568999999999999999999999999999999999988877666552 467789999985 23444555555
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
++ ++|++|||||.... .++.+.+.+.+++++++|+.|++.+++.++|.|.+++.|+||++||.++.. +.++...
T Consensus 76 ~~--~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~ 149 (273)
T PRK07825 76 LG--PIDVLVNNAGVMPV--GPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKI--PVPGMAT 149 (273)
T ss_pred cC--CCCEEEECCCcCCC--CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccC--CCCCCcc
Confidence 55 46699999998764 567788999999999999999999999999999998899999999999988 6788999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc--cCCCCCCCHHHHHHHHHHHhCCCC-cccCCchHHHH
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK--RSSFFVPSTDVYARAAMRWIGYEP-CCTPYWPHSFI 284 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~--~~~~~~~~~~~~a~~i~~~l~~~~-~~~~~~~~~~~ 284 (320)
|++||+++.+|+++++.|+.+.||+|++|+||+++|++.... .......+|+++|+.++..+..++ ....++.....
T Consensus 150 Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~~~~~~~~~~~~~~ 229 (273)
T PRK07825 150 YCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTGGAKGFKNVEPEDVAAAIVGTVAKPRPEVRVPRALGPL 229 (273)
T ss_pred hHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhcccccccCCCCCCHHHHHHHHHHHHhCCCCEEeccHHHHHH
Confidence 999999999999999999999999999999999999997642 122346899999999999998773 33444455566
Q ss_pred HHHHhhchHHHHHHHHHH
Q 020854 285 WGVLSILPEKLIDAGRLQ 302 (320)
Q Consensus 285 ~~l~~~~P~~~~~~~~~~ 302 (320)
.++.+++|.++.+++...
T Consensus 230 ~~~~~~~p~~~~~~~~~~ 247 (273)
T PRK07825 230 AQAQRLLPRRVREALNRL 247 (273)
T ss_pred HHHHHhCcHHHHHHHHHH
Confidence 777889999888876544
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-37 Score=274.18 Aligned_cols=237 Identities=21% Similarity=0.227 Sum_probs=195.5
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHc
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIE 129 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~ 129 (320)
.+|+++||||+||||+++|++|+++|++|++++|+.+++++..+ ..+..+.+|++|. +++.++++.+.++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~--------~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 74 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA--------EGLEAFQLDYAEPESIAALVAQVLELSG 74 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--------CCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence 37899999999999999999999999999999999887664432 1367789999985 1333344433332
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhH
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA 209 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~ 209 (320)
+ ++|+||||||.... +++.+.+.++++.++++|+.|++.+++.++|.|.+++.|+||++||..+.. +.+..+.|+
T Consensus 75 g-~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~--~~~~~~~Y~ 149 (277)
T PRK05993 75 G-RLDALFNNGAYGQP--GAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLV--PMKYRGAYN 149 (277)
T ss_pred C-CccEEEECCCcCCC--CCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcC--CCCccchHH
Confidence 2 57799999998764 567888999999999999999999999999999988889999999999987 678889999
Q ss_pred HHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc------------------------------cCCCCCCCHH
Q 020854 210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK------------------------------RSSFFVPSTD 259 (320)
Q Consensus 210 asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~------------------------------~~~~~~~~~~ 259 (320)
+||+|+++|+++|+.|+++.||+|++|+||+++|++.... .......+||
T Consensus 150 asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (277)
T PRK05993 150 ASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGPE 229 (277)
T ss_pred HHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCCHH
Confidence 9999999999999999999999999999999999986521 0112357899
Q ss_pred HHHHHHHHHhCCCC---cccCCchHHHHHHHHhhchHHHHHHHHH
Q 020854 260 VYARAAMRWIGYEP---CCTPYWPHSFIWGVLSILPEKLIDAGRL 301 (320)
Q Consensus 260 ~~a~~i~~~l~~~~---~~~~~~~~~~~~~l~~~~P~~~~~~~~~ 301 (320)
++|+.+++++..++ ...+.+...+..++.+++|.++++++..
T Consensus 230 ~va~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 274 (277)
T PRK05993 230 AVYAVLLHALTAPRPRPHYRVTTPAKQGALLKRLLPARWLYRLLR 274 (277)
T ss_pred HHHHHHHHHHcCCCCCCeeeeCchhHHHHHHHHHCCHHHHHHHHh
Confidence 99999999998763 2445567778888899999888776543
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-37 Score=270.76 Aligned_cols=243 Identities=25% Similarity=0.310 Sum_probs=200.7
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHcC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEG 130 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~ 130 (320)
+++++||||++|||++++++|+++|++|++++|+.+++++..+++... . ++..+++|++|. +.+.++++.+.++.
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~ 78 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKA--A-RVSVYAADVRDADALAAAAADFIAAHGL 78 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccC--C-eeEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 578999999999999999999999999999999998887776666432 2 788999999985 23344444444553
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHH
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA 210 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~a 210 (320)
+|++|||||.... .....+.+.++++.++++|+.|++.+++.++|.|.+++.|+||++||.++.. +.+....|++
T Consensus 79 --id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~--~~~~~~~Y~a 153 (257)
T PRK07024 79 --PDVVIANAGISVG-TLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVR--GLPGAGAYSA 153 (257)
T ss_pred --CCEEEECCCcCCC-ccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcC--CCCCCcchHH
Confidence 6699999998653 1223347889999999999999999999999999888889999999999988 6788899999
Q ss_pred HHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc-cCCCCCCCHHHHHHHHHHHhCCCC-cccCCchHHHHHHHH
Q 020854 211 TKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK-RSSFFVPSTDVYARAAMRWIGYEP-CCTPYWPHSFIWGVL 288 (320)
Q Consensus 211 sKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~a~~i~~~l~~~~-~~~~~~~~~~~~~l~ 288 (320)
||++++.++++++.|++++||+|++|+||+++|++.... .+.....+|+++|+.+++.+..+. .....+...+...+.
T Consensus 154 sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~ 233 (257)
T PRK07024 154 SKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHNPYPMPFLMDADRFAARAARAIARGRRFRVIPWQMGVVAKLL 233 (257)
T ss_pred HHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcCCCCCCCccCHHHHHHHHHHHHhCCCcEEECCchHHHHHHHH
Confidence 999999999999999999999999999999999986532 122234689999999999999874 444556667777788
Q ss_pred hhchHHHHHHHHHHH
Q 020854 289 SILPEKLIDAGRLQF 303 (320)
Q Consensus 289 ~~~P~~~~~~~~~~~ 303 (320)
+.+|.++++++..+.
T Consensus 234 ~~~p~~~~~~~~~~~ 248 (257)
T PRK07024 234 RVLPRWLYDRLFAGA 248 (257)
T ss_pred HHCcHHHHHHHHhhc
Confidence 999999988776543
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-37 Score=271.53 Aligned_cols=231 Identities=24% Similarity=0.284 Sum_probs=191.0
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
++||+++||||++|||++++++|+++|++|++++|+.+++++..+++.+.+.+.++..+++|++|. +++.++++.+.+
T Consensus 5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF 84 (260)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 569999999999999999999999999999999999999998888887644456788999999985 245566666666
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
++ +|+||||||.... .++.+.+.++|++++++|+.+++.+++.++|.|.+++.|+||++||..+.. +.++...|
T Consensus 85 g~--id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~Y 158 (260)
T PRK07063 85 GP--LDVLVNNAGINVF--ADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFK--IIPGCFPY 158 (260)
T ss_pred CC--CcEEEECCCcCCC--CChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhcc--CCCCchHH
Confidence 65 5699999998653 445678899999999999999999999999999888889999999999887 67888999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHHH
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVL 288 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l~ 288 (320)
++||+|+.+|+++++.|++++||+||+|+||+++|++...... ...+++...+......+.++...|++.+..+.|++
T Consensus 159 ~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~r~~~~~~va~~~~fl~ 236 (260)
T PRK07063 159 PVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWN--AQPDPAAARAETLALQPMKRIGRPEEVAMTAVFLA 236 (260)
T ss_pred HHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhh--ccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999998653111 11233434444455556667778888888777765
Q ss_pred h
Q 020854 289 S 289 (320)
Q Consensus 289 ~ 289 (320)
+
T Consensus 237 s 237 (260)
T PRK07063 237 S 237 (260)
T ss_pred C
Confidence 4
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-36 Score=264.71 Aligned_cols=241 Identities=24% Similarity=0.363 Sum_probs=207.8
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHcC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEG 130 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~ 130 (320)
+|+++||||++|||++++++|+++|++|++++|+.+++++..+++.+.+++..+..+++|++|. +.+.++++.+.+++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 6899999999999999999999999999999999999888888887766677899999999985 24445555555554
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCC-chhhH
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL-YSVYA 209 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~-~~~Y~ 209 (320)
+|++|||||+..+ .++.+.+.+.+++++++|+.+++.+++.++|.+.+.+.++||++||..+.. +.++ ...|+
T Consensus 82 --id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~~Y~ 155 (248)
T PRK08251 82 --LDRVIVNAGIGKG--ARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVR--GLPGVKAAYA 155 (248)
T ss_pred --CCEEEECCCcCCC--CCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEecccccc--CCCCCcccHH
Confidence 5699999998764 456677888899999999999999999999999888889999999998877 5554 68899
Q ss_pred HHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCC--cccCCchHHHHHHH
Q 020854 210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEP--CCTPYWPHSFIWGV 287 (320)
Q Consensus 210 asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~--~~~~~~~~~~~~~l 287 (320)
+||+++++++++++.|+...|++|++|+||+++|++...........++++.|+.+++.+..+. ...|.+.+....++
T Consensus 156 ~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~a~~i~~~~~~~~~~~~~~~~~~~~~~~~ 235 (248)
T PRK08251 156 ASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKSTPFMVDTETGVKALVKAIEKEPGRAAVPWWPWAPLGAL 235 (248)
T ss_pred HHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhccccCCccCCHHHHHHHHHHHHhcCCCeEEcCcchHHHHHHH
Confidence 9999999999999999998999999999999999998765444557899999999999998873 35777888888999
Q ss_pred HhhchHHHHHHH
Q 020854 288 LSILPEKLIDAG 299 (320)
Q Consensus 288 ~~~~P~~~~~~~ 299 (320)
.+++|.+++.++
T Consensus 236 ~~~~p~~~~~~~ 247 (248)
T PRK08251 236 MRVLPLRLVRKF 247 (248)
T ss_pred HHHCcHHHHHhh
Confidence 999999888764
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-37 Score=272.17 Aligned_cols=224 Identities=16% Similarity=0.081 Sum_probs=182.0
Q ss_pred cCCCEEEEECCC--CcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 51 KYGSWALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 51 ~~gk~vlITGas--~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++||+++||||+ +|||+++|++|+++|++|++++|+. +.++..+++. +..+..+++|++|. +++.++++.+
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~ 79 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV----DEEDLLVECDVASDESIERAFATIKE 79 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc----cCceeEEeCCCCCHHHHHHHHHHHHH
Confidence 569999999999 7999999999999999999999984 4444444432 23578899999985 3556666666
Q ss_pred HHcCCCeEEEEEccCCCCCc--cccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCC
Q 020854 127 AIEGLDVGVLINNVGISYPY--ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL 204 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~--~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~ 204 (320)
.+++ +|+||||||...+. ..++.+.+.++|++++++|+.+++.+++.++|+|.+ +|+||++||.++.. +.++
T Consensus 80 ~~g~--iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~--~~~~ 153 (252)
T PRK06079 80 RVGK--IDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP--GASIVTLTYFGSER--AIPN 153 (252)
T ss_pred HhCC--CCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc--CceEEEEeccCccc--cCCc
Confidence 6665 55999999986431 246788999999999999999999999999999853 58999999999987 6788
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHH
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFI 284 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~ 284 (320)
+..|++||+|+.+|+++|+.|++++||+||+|+||+|+|++.... ..+++..+...+..+.++...|++++..+
T Consensus 154 ~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~------~~~~~~~~~~~~~~p~~r~~~pedva~~~ 227 (252)
T PRK06079 154 YNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGI------KGHKDLLKESDSRTVDGVGVTIEEVGNTA 227 (252)
T ss_pred chhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccC------CChHHHHHHHHhcCcccCCCCHHHHHHHH
Confidence 999999999999999999999999999999999999999986431 12334445555555666888888899888
Q ss_pred HHHHhhc
Q 020854 285 WGVLSIL 291 (320)
Q Consensus 285 ~~l~~~~ 291 (320)
.|+++-.
T Consensus 228 ~~l~s~~ 234 (252)
T PRK06079 228 AFLLSDL 234 (252)
T ss_pred HHHhCcc
Confidence 8877643
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-36 Score=270.66 Aligned_cols=244 Identities=26% Similarity=0.325 Sum_probs=198.0
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
...++||+++||||+||||+++|++|+++|++|++++|+.+++++..+++.+. +..+..+++|++|. +.+.++.+.
T Consensus 35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~ 112 (293)
T PRK05866 35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRA--GGDAMAVPCDLSDLDAVDALVADVE 112 (293)
T ss_pred CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence 34577899999999999999999999999999999999999988888877654 34678899999985 234444455
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCC--CHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCC
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEV--DQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP 203 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~--~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~ 203 (320)
+.++ ++|++|||||.... .++.+. +.++++.++++|+.|++.+++.++|.|.+++.|+||++||.++... +.+
T Consensus 113 ~~~g--~id~li~~AG~~~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-~~p 187 (293)
T PRK05866 113 KRIG--GVDILINNAGRSIR--RPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSE-ASP 187 (293)
T ss_pred HHcC--CCCEEEECCCCCCC--cchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCC-CCC
Confidence 5555 46699999998754 334432 4578899999999999999999999999888899999999766541 357
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcccc--CCCCCCCHHHHHHHHHHHhCCCCcccCCchH
Q 020854 204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKR--SSFFVPSTDVYARAAMRWIGYEPCCTPYWPH 281 (320)
Q Consensus 204 ~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~--~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~ 281 (320)
+...|++||+|+++|+++++.|++++||+|++|+||+++|++..... ......+||++|+.+++++.+++........
T Consensus 188 ~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~~~~~~~~~~pe~vA~~~~~~~~~~~~~~~~~~~ 267 (293)
T PRK05866 188 LFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTKAYDGLPALTADEAAEWMVTAARTRPVRIAPRVA 267 (293)
T ss_pred CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccccccCCCCCCHHHHHHHHHHHHhcCCeEEcccHH
Confidence 78899999999999999999999999999999999999999986321 1233579999999999999987544344566
Q ss_pred HHHHHHHhhchHHHHHH
Q 020854 282 SFIWGVLSILPEKLIDA 298 (320)
Q Consensus 282 ~~~~~l~~~~P~~~~~~ 298 (320)
.+..++.+++|.++...
T Consensus 268 ~~~~~~~~~~p~~~~~~ 284 (293)
T PRK05866 268 VAARALDSVAPRAVNAL 284 (293)
T ss_pred HHHHHHHHhCcHHHHHH
Confidence 67788888999766543
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-37 Score=273.94 Aligned_cols=225 Identities=18% Similarity=0.144 Sum_probs=172.9
Q ss_pred ccCCCEEEEECCC--CcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHH
Q 020854 50 RKYGSWALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 50 ~~~gk~vlITGas--~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
.++||+++||||+ +|||+++|++|+++|++|++++|+.+ .++..+++.+..+. . ..+++|++|. ++..++++.
T Consensus 2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~-~-~~~~~Dv~d~~~v~~~~~~i~ 78 (274)
T PRK08415 2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGS-D-YVYELDVSKPEHFKSLAESLK 78 (274)
T ss_pred ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCC-c-eEEEecCCCHHHHHHHHHHHH
Confidence 3569999999997 89999999999999999999999863 23333444333222 2 5789999985 355666666
Q ss_pred HHHcCCCeEEEEEccCCCCCc--cccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCC
Q 020854 126 EAIEGLDVGVLINNVGISYPY--ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP 203 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~--~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~ 203 (320)
+.+++ +|+||||||+..+. ..++.+.+.++|++++++|+.|++++++.++|.|.+ +|+||++||.++.. +.|
T Consensus 79 ~~~g~--iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--~g~Iv~isS~~~~~--~~~ 152 (274)
T PRK08415 79 KDLGK--IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND--GASVLTLSYLGGVK--YVP 152 (274)
T ss_pred HHcCC--CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc--CCcEEEEecCCCcc--CCC
Confidence 66664 56999999985421 246788999999999999999999999999999964 58999999999877 678
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHH
Q 020854 204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSF 283 (320)
Q Consensus 204 ~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~ 283 (320)
++..|++||+|+.+|+++|+.|++++||+||+|+||+|+|++.... .+.+...+......+.++...|+++..+
T Consensus 153 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~------~~~~~~~~~~~~~~pl~r~~~pedva~~ 226 (274)
T PRK08415 153 HYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGI------GDFRMILKWNEINAPLKKNVSIEEVGNS 226 (274)
T ss_pred cchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhcc------chhhHHhhhhhhhCchhccCCHHHHHHH
Confidence 8899999999999999999999999999999999999999875421 0111111111222344566677777777
Q ss_pred HHHHHh
Q 020854 284 IWGVLS 289 (320)
Q Consensus 284 ~~~l~~ 289 (320)
+.|+++
T Consensus 227 v~fL~s 232 (274)
T PRK08415 227 GMYLLS 232 (274)
T ss_pred HHHHhh
Confidence 776665
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=272.16 Aligned_cols=188 Identities=18% Similarity=0.205 Sum_probs=156.9
Q ss_pred cCCCEEEEECCCC--cHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 51 KYGSWALVTGPTD--GIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 51 ~~gk~vlITGas~--GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++||++|||||++ |||+++|++|+++|++|++++|+....+. .+++.+.. +. ...+++|++|. ++..++++.+
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~-~~~~~~~~-g~-~~~~~~Dv~d~~~v~~~~~~~~~ 81 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKR-VKPLAESL-GS-DFVLPCDVEDIASVDAVFEALEK 81 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHH-HHHHHHhc-CC-ceEEeCCCCCHHHHHHHHHHHHH
Confidence 5699999999996 99999999999999999999998644333 33343322 22 35689999985 3566677777
Q ss_pred HHcCCCeEEEEEccCCCCCc--cccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCC
Q 020854 127 AIEGLDVGVLINNVGISYPY--ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL 204 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~--~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~ 204 (320)
.++. +|+||||||+.... ..++.+.+.++|++++++|+.++++++++++|+|.+ +|+||++||.++.. +.|+
T Consensus 82 ~~g~--iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--~G~Iv~isS~~~~~--~~~~ 155 (271)
T PRK06505 82 KWGK--LDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--GGSMLTLTYGGSTR--VMPN 155 (271)
T ss_pred HhCC--CCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--CceEEEEcCCCccc--cCCc
Confidence 7775 55999999986421 145778999999999999999999999999999963 58999999999877 6788
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
+..|++||+|+.+|+++|+.|++++||+||+|+||+++|+|..
T Consensus 156 ~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~ 198 (271)
T PRK06505 156 YNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGA 198 (271)
T ss_pred cchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccc
Confidence 8999999999999999999999999999999999999999853
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=269.53 Aligned_cols=226 Identities=24% Similarity=0.280 Sum_probs=182.6
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
+++.||+++||||++|||+++|++|+++|++|++++|+.. ++..+++.+. +.++..+.+|++|. +++.++++.+
T Consensus 4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (251)
T PRK12481 4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEAL--GRKFHFITADLIQQKDIDSIVSQAVE 79 (251)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHc--CCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence 3467999999999999999999999999999999998753 2333444332 45688899999985 2455555555
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccccCCCCCc
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
.+++ +|+||||||.... .++.+.+.++|++++++|+.+++.+++.++|.|.+++ +|+||++||.++.. +.++.
T Consensus 80 ~~g~--iD~lv~~ag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~--~~~~~ 153 (251)
T PRK12481 80 VMGH--IDILINNAGIIRR--QDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQ--GGIRV 153 (251)
T ss_pred HcCC--CCEEEECCCcCCC--CCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcC--CCCCC
Confidence 6665 5699999998754 5678889999999999999999999999999998765 68999999999987 66778
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHH
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIW 285 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~ 285 (320)
..|++||+|+.+|+++++.|++++||+||+|+||+++|++.... ...++..+.+...++.++...|+++..++.
T Consensus 154 ~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~------~~~~~~~~~~~~~~p~~~~~~peeva~~~~ 227 (251)
T PRK12481 154 PSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAAL------RADTARNEAILERIPASRWGTPDDLAGPAI 227 (251)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhc------ccChHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 89999999999999999999999999999999999999987531 111233345555666667778888888877
Q ss_pred HHHhh
Q 020854 286 GVLSI 290 (320)
Q Consensus 286 ~l~~~ 290 (320)
++++-
T Consensus 228 ~L~s~ 232 (251)
T PRK12481 228 FLSSS 232 (251)
T ss_pred HHhCc
Confidence 77653
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-36 Score=269.20 Aligned_cols=235 Identities=19% Similarity=0.230 Sum_probs=190.7
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
.+++||+++||||++|||++++++|+++|++|++++|+.+++++..+++.+.+++.++..+.+|++|. +++.++++.+
T Consensus 4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (265)
T PRK07062 4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEA 83 (265)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence 34679999999999999999999999999999999999999998888887776666888999999985 2445555556
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
.+++ +|+||||||.... .++.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||.++.. +.++..
T Consensus 84 ~~g~--id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~ 157 (265)
T PRK07062 84 RFGG--VDMLVNNAGQGRV--STFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQ--PEPHMV 157 (265)
T ss_pred hcCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccC--CCCCch
Confidence 6664 5699999998653 567888999999999999999999999999999988889999999999987 678889
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccC--CCCCCCHHHHHHHHH--HHhCCCCcccCCchHH
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRS--SFFVPSTDVYARAAM--RWIGYEPCCTPYWPHS 282 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~--~~~~~~~~~~a~~i~--~~l~~~~~~~~~~~~~ 282 (320)
.|+++|+|+.+|+++++.|++++||+|++|+||+++|++...... .......++..+... ..++.++...|.++..
T Consensus 158 ~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~ 237 (265)
T PRK07062 158 ATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAAR 237 (265)
T ss_pred HhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHHHH
Confidence 999999999999999999999999999999999999998653111 001111222222221 2344456777778887
Q ss_pred HHHHHHh
Q 020854 283 FIWGVLS 289 (320)
Q Consensus 283 ~~~~l~~ 289 (320)
.+.++++
T Consensus 238 ~~~~L~s 244 (265)
T PRK07062 238 ALFFLAS 244 (265)
T ss_pred HHHHHhC
Confidence 7777665
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=268.72 Aligned_cols=233 Identities=27% Similarity=0.318 Sum_probs=186.7
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcC-CceEEEEEEeCCCC--cHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYA-KTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
..+.||+++||||++|||+++|++|++.|++|++++|+.+++++...++...+. +.++..+.||++++ .++.++...
T Consensus 4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~ 83 (270)
T KOG0725|consen 4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV 83 (270)
T ss_pred ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence 457799999999999999999999999999999999999999998888765432 46799999999975 356666666
Q ss_pred HH-HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhH-HHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCC
Q 020854 126 EA-IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVE-GTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP 203 (320)
Q Consensus 126 ~~-~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~-g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~ 203 (320)
+. +++ +|+||||||..... .++.+.++++|++++++|+. +.+.+.+.+.|++.++++|+|+++||.++.. +.+
T Consensus 84 ~~~~Gk--idiLvnnag~~~~~-~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~--~~~ 158 (270)
T KOG0725|consen 84 EKFFGK--IDILVNNAGALGLT-GSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVG--PGP 158 (270)
T ss_pred HHhCCC--CCEEEEcCCcCCCC-CChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEecccccc--CCC
Confidence 66 454 55999999998752 37899999999999999999 5788888888888888899999999999987 434
Q ss_pred Cc-hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHH--HHHHhCCCCcccCCch
Q 020854 204 LY-SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARA--AMRWIGYEPCCTPYWP 280 (320)
Q Consensus 204 ~~-~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~--i~~~l~~~~~~~~~~~ 280 (320)
.. .+|++||+|+++|+|+|+.||+++|||||+|+||.+.|++... .......++..+. ....++.++...|.++
T Consensus 159 ~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~---~~~~~~~~~~~~~~~~~~~~p~gr~g~~~ev 235 (270)
T KOG0725|consen 159 GSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAA---GLDDGEMEEFKEATDSKGAVPLGRVGTPEEV 235 (270)
T ss_pred CCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCcccc---ccccchhhHHhhhhccccccccCCccCHHHH
Confidence 44 7999999999999999999999999999999999999998211 1111112233332 2234456677788887
Q ss_pred HHHHHHHHh
Q 020854 281 HSFIWGVLS 289 (320)
Q Consensus 281 ~~~~~~l~~ 289 (320)
...+.|++.
T Consensus 236 a~~~~fla~ 244 (270)
T KOG0725|consen 236 AEAAAFLAS 244 (270)
T ss_pred HHhHHhhcC
Confidence 777776653
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-36 Score=261.30 Aligned_cols=245 Identities=23% Similarity=0.276 Sum_probs=200.4
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+..+|.|+|||+.+|+|+.+|++|.++|++|.....+++..++...+.. +.+...+++|++++ +++..+.+.+.
T Consensus 26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~----s~rl~t~~LDVT~~esi~~a~~~V~~~ 101 (322)
T KOG1610|consen 26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK----SPRLRTLQLDVTKPESVKEAAQWVKKH 101 (322)
T ss_pred ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc----CCcceeEeeccCCHHHHHHHHHHHHHh
Confidence 4668999999999999999999999999999999988887776666553 56788889999975 35666777777
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
++...+..||||||+... .++.+..+.+++++++++|++|++.+++.++|++++ .+|||||+||+.|.. +.|...+
T Consensus 102 l~~~gLwglVNNAGi~~~-~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~-arGRvVnvsS~~GR~--~~p~~g~ 177 (322)
T KOG1610|consen 102 LGEDGLWGLVNNAGISGF-LGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRR-ARGRVVNVSSVLGRV--ALPALGP 177 (322)
T ss_pred cccccceeEEeccccccc-cCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHh-ccCeEEEecccccCc--cCccccc
Confidence 777678899999998765 577889999999999999999999999999998875 489999999999988 7899999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc-----------------------------------ccCC
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI-----------------------------------KRSS 252 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~-----------------------------------~~~~ 252 (320)
|++||+|++.|+.+|++|+.+.||+|..|.||..+|++... ....
T Consensus 178 Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~~~~~~~~~~~~w~~l~~e~k~~YGedy~~~~~~~~~~~~~ 257 (322)
T KOG1610|consen 178 YCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLANPEKLEKRMKEIWERLPQETKDEYGEDYFEDYKKSLEKYLS 257 (322)
T ss_pred chhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCChHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999851 0000
Q ss_pred CCCCCHHHHHHHHHHHhCCC---CcccCCchHHHHHHHHhhchHHHHHHHHHH
Q 020854 253 FFVPSTDVYARAAMRWIGYE---PCCTPYWPHSFIWGVLSILPEKLIDAGRLQ 302 (320)
Q Consensus 253 ~~~~~~~~~a~~i~~~l~~~---~~~~~~~~~~~~~~l~~~~P~~~~~~~~~~ 302 (320)
....+-..+.+.+..++-.. ....|.|.+.+.++.++.+|.++.+++..+
T Consensus 258 ~~~~dls~v~~~~~hAlts~~Pr~RY~~g~da~l~~~p~s~lPt~l~D~i~~~ 310 (322)
T KOG1610|consen 258 VASADLSPVVDCYEHALTSKHPRTRYSPGWDAKLLYIPLSYLPTALQDWILSR 310 (322)
T ss_pred hhccccchHHHHHHHHHHhcCcchhcCcccchHHHHhhHHhCCHHHHHHHHhc
Confidence 01112223333344444322 224566888899999999999999998764
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=264.45 Aligned_cols=252 Identities=23% Similarity=0.296 Sum_probs=208.1
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHcCC
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEGL 131 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~ 131 (320)
++++||||+||||++++++|+++|++|++++|+.+++++..++++.. +.++..+.+|++|. +++.++.+.+.++
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-- 76 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREA--GGDGFYQRCDVRDYSQLTALAQACEEKWG-- 76 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHcC--
Confidence 57999999999999999999999999999999999988888888664 44678899999975 2334444444444
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHHH
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAAT 211 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~as 211 (320)
++|+||||||.... .++.+.+.+++++++++|+.+++.+++.++|.|.+++.++||++||..+.. +.++.+.|++|
T Consensus 77 ~id~lI~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~--~~~~~~~Y~~s 152 (270)
T PRK05650 77 GIDVIVNNAGVASG--GFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLM--QGPAMSSYNVA 152 (270)
T ss_pred CCCEEEECCCCCCC--CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcC--CCCCchHHHHH
Confidence 46699999998764 567888999999999999999999999999999888789999999999988 67889999999
Q ss_pred HHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcccc---C----------CCCCCCHHHHHHHHHHHhCCCC-cccC
Q 020854 212 KAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKR---S----------SFFVPSTDVYARAAMRWIGYEP-CCTP 277 (320)
Q Consensus 212 Kaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~---~----------~~~~~~~~~~a~~i~~~l~~~~-~~~~ 277 (320)
|+++++++++|+.|+.+.||+|++|+||+++|++..... + .....+++++|+.+++.+..++ ...+
T Consensus 153 Kaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~l~~~~~~~~~ 232 (270)
T PRK05650 153 KAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIADYIYQQVAKGEFLILP 232 (270)
T ss_pred HHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHhhcCCCCHHHHHHHHHHHHhCCCEEEec
Confidence 999999999999999999999999999999999865311 0 1224699999999999999874 3456
Q ss_pred CchHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhhhh
Q 020854 278 YWPHSFIWGVLSILPEKLIDAGRLQFSIGIRKRGQLK 314 (320)
Q Consensus 278 ~~~~~~~~~l~~~~P~~~~~~~~~~~~~~~r~~~~~~ 314 (320)
.......+++.+++|.++..++..+ ..+.|.+.++|
T Consensus 233 ~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~ 268 (270)
T PRK05650 233 HEQGRRAWQLKRQAPQALYDEMTLM-ATKMRAKSQRK 268 (270)
T ss_pred CchHHHHHHHHHHChHHHHHHHHHh-hHHHHHhhhcc
Confidence 6666677788899999888877653 34455554443
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=273.10 Aligned_cols=192 Identities=19% Similarity=0.177 Sum_probs=158.5
Q ss_pred cccCCCEEEEECC--CCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhc-------CC----ceEEEEEEeC--
Q 020854 49 LRKYGSWALVTGP--TDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKY-------AK----TQIKSVVVDF-- 113 (320)
Q Consensus 49 ~~~~gk~vlITGa--s~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~-------~~----~~~~~~~~D~-- 113 (320)
++++||++||||| |+|||+++|+.|++.|++|++ +|+.+++++...++++.. +. .....+.+|+
T Consensus 5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 83 (303)
T PLN02730 5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF 83 (303)
T ss_pred cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence 3477999999999 899999999999999999999 889888888877765310 11 1145677887
Q ss_pred CC--------------------CcHHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHH
Q 020854 114 SG--------------------DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173 (320)
Q Consensus 114 ~~--------------------~~~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~ 173 (320)
++ +++..++++.+.+++ +|+||||||.......++.+.+.++|++++++|+.+++.++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~--iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~ 161 (303)
T PLN02730 84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGS--IDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLL 161 (303)
T ss_pred CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCC--CCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence 22 235556666666665 55999999865322367889999999999999999999999
Q ss_pred HHHhHhhhcCCCcEEEEEcCccccccCCCCCc-hhhHHHHHHHHHHHHHHHHHHcc-CCceEEEEeccceecCCCc
Q 020854 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY-SVYAATKAYIDQFSRSLYVEYRK-SGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 174 ~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~-~~Y~asKaal~~~~~~l~~el~~-~gi~v~~v~PG~v~T~~~~ 247 (320)
+.++|.|.++ |+||++||.++.. +.|++ ..|++||+|+.+|+++|+.|+++ +||+||+|+||+++|+|..
T Consensus 162 ~~~~p~m~~~--G~II~isS~a~~~--~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~ 233 (303)
T PLN02730 162 QHFGPIMNPG--GASISLTYIASER--IIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAK 233 (303)
T ss_pred HHHHHHHhcC--CEEEEEechhhcC--CCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhh
Confidence 9999999753 9999999999987 56655 58999999999999999999986 7999999999999999975
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-36 Score=267.58 Aligned_cols=225 Identities=15% Similarity=0.091 Sum_probs=177.3
Q ss_pred cCCCEEEEECCCC--cHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 51 KYGSWALVTGPTD--GIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 51 ~~gk~vlITGas~--GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++||+++|||||+ |||+++|++|+++|++|++++|+. +.++..+++.+..+ . ...+++|++|. +++.++++.+
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g-~-~~~~~~Dv~~~~~v~~~~~~~~~ 82 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIG-C-NFVSELDVTNPKSISNLFDDIKE 82 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcC-C-ceEEEccCCCHHHHHHHHHHHHH
Confidence 4689999999997 999999999999999999999884 44445555654322 2 24678999985 3555666666
Q ss_pred HHcCCCeEEEEEccCCCCCc--cccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCC
Q 020854 127 AIEGLDVGVLINNVGISYPY--ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL 204 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~--~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~ 204 (320)
++++ +|+||||||..... ..++.+.+.++|++++++|+.+++.+++.+.|.|. ++|+||++||.++.. +.++
T Consensus 83 ~~g~--iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~--~~G~Iv~isS~~~~~--~~~~ 156 (260)
T PRK06603 83 KWGS--FDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMH--DGGSIVTLTYYGAEK--VIPN 156 (260)
T ss_pred HcCC--ccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhc--cCceEEEEecCcccc--CCCc
Confidence 6664 66999999975421 24577889999999999999999999999999995 358999999999887 6788
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHH
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFI 284 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~ 284 (320)
+..|++||+|+.+|+++|+.|++++||+||+|+||+++|+|.... ...++..+.+....+.++...|.++..++
T Consensus 157 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~------~~~~~~~~~~~~~~p~~r~~~pedva~~~ 230 (260)
T PRK06603 157 YNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAI------GDFSTMLKSHAATAPLKRNTTQEDVGGAA 230 (260)
T ss_pred ccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcC------CCcHHHHHHHHhcCCcCCCCCHHHHHHHH
Confidence 899999999999999999999999999999999999999985421 11122233344445556777788888887
Q ss_pred HHHHhh
Q 020854 285 WGVLSI 290 (320)
Q Consensus 285 ~~l~~~ 290 (320)
.|+++-
T Consensus 231 ~~L~s~ 236 (260)
T PRK06603 231 VYLFSE 236 (260)
T ss_pred HHHhCc
Confidence 777653
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=271.40 Aligned_cols=241 Identities=24% Similarity=0.255 Sum_probs=203.0
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
+++|+++|||||+|||++++++|+++|++|++++|+.+++++..+++.+. +.++..+.+|++|. +++.++.+.+.+
T Consensus 6 l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~--g~~~~~v~~Dv~d~~~v~~~~~~~~~~~ 83 (334)
T PRK07109 6 IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAA--GGEALAVVADVADAEAVQAAADRAEEEL 83 (334)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc--CCcEEEEEecCCCHHHHHHHHHHHHHHC
Confidence 56899999999999999999999999999999999999999888888764 45688899999985 244555556666
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
+. +|++|||||.... .++.+.+.+++++++++|+.|++++++.++|+|.+++.|+||++||..+.. +.+..+.|
T Consensus 84 g~--iD~lInnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~--~~~~~~~Y 157 (334)
T PRK07109 84 GP--IDTWVNNAMVTVF--GPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYR--SIPLQSAY 157 (334)
T ss_pred CC--CCEEEECCCcCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhcc--CCCcchHH
Confidence 64 5699999998653 567889999999999999999999999999999988889999999999988 67888999
Q ss_pred HHHHHHHHHHHHHHHHHHcc--CCceEEEEeccceecCCCcc--------ccCCCCCCCHHHHHHHHHHHhCCC-CcccC
Q 020854 209 AATKAYIDQFSRSLYVEYRK--SGIDVQCQVPLYVATKMASI--------KRSSFFVPSTDVYARAAMRWIGYE-PCCTP 277 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~--~gi~v~~v~PG~v~T~~~~~--------~~~~~~~~~~~~~a~~i~~~l~~~-~~~~~ 277 (320)
++||+++.+|+++++.|+.. .||+|++|+||.++|+++.. ..+.....+||++|+.++..+..+ +....
T Consensus 158 ~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~pe~vA~~i~~~~~~~~~~~~v 237 (334)
T PRK07109 158 CAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSRLPVEPQPVPPIYQPEVVADAILYAAEHPRRELWV 237 (334)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhhccccccCCCCCCCHHHHHHHHHHHHhCCCcEEEe
Confidence 99999999999999999975 47999999999999998642 112234679999999999999876 55566
Q ss_pred CchHHHHHHHHhhchHHHHHHHH
Q 020854 278 YWPHSFIWGVLSILPEKLIDAGR 300 (320)
Q Consensus 278 ~~~~~~~~~l~~~~P~~~~~~~~ 300 (320)
.+.........+++|.++ ++..
T Consensus 238 g~~~~~~~~~~~~~P~~~-~~~~ 259 (334)
T PRK07109 238 GGPAKAAILGNRLAPGLL-DRYL 259 (334)
T ss_pred CcHHHHHHHHHHhCcHHH-HHHH
Confidence 667777777888999654 4444
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-36 Score=268.13 Aligned_cols=226 Identities=18% Similarity=0.122 Sum_probs=177.5
Q ss_pred cCCCEEEEECC--CCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 51 KYGSWALVTGP--TDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 51 ~~gk~vlITGa--s~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++||+++|||| ++|||+++|++|+++|++|++++|+. +.++..+++....+ ....+++|++|. +++.++++.+
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELD--SELVFRCDVASDDEINQVFADLGK 80 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccC--CceEEECCCCCHHHHHHHHHHHHH
Confidence 56999999997 67999999999999999999998864 33444555544322 245789999985 3556666666
Q ss_pred HHcCCCeEEEEEccCCCCCc---cccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCC
Q 020854 127 AIEGLDVGVLINNVGISYPY---ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP 203 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~---~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~ 203 (320)
++++ +|+||||||+.... ...+++.+.++|++++++|+.+++++++.++|.|+++ +|+||++||.++.. +.|
T Consensus 81 ~~g~--iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~iss~~~~~--~~~ 155 (261)
T PRK08690 81 HWDG--LDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-NSAIVALSYLGAVR--AIP 155 (261)
T ss_pred HhCC--CcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-CcEEEEEccccccc--CCC
Confidence 6665 56999999986431 1124567889999999999999999999999998654 58999999999987 678
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHH
Q 020854 204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSF 283 (320)
Q Consensus 204 ~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~ 283 (320)
++..|++||+|+.+|+++|+.|++++||+||+|+||+++|++.... .+.++..+.+.+..+.+|...|++++.+
T Consensus 156 ~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~------~~~~~~~~~~~~~~p~~r~~~peevA~~ 229 (261)
T PRK08690 156 NYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGI------ADFGKLLGHVAAHNPLRRNVTIEEVGNT 229 (261)
T ss_pred CcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcC------CchHHHHHHHhhcCCCCCCCCHHHHHHH
Confidence 8999999999999999999999999999999999999999986531 1223333444444555677788888888
Q ss_pred HHHHHhh
Q 020854 284 IWGVLSI 290 (320)
Q Consensus 284 ~~~l~~~ 290 (320)
+.|+++-
T Consensus 230 v~~l~s~ 236 (261)
T PRK08690 230 AAFLLSD 236 (261)
T ss_pred HHHHhCc
Confidence 8887663
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-36 Score=265.77 Aligned_cols=226 Identities=16% Similarity=0.103 Sum_probs=177.2
Q ss_pred cccCCCEEEEECCC--CcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHH
Q 020854 49 LRKYGSWALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERI 124 (320)
Q Consensus 49 ~~~~gk~vlITGas--~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~ 124 (320)
.+++||+++||||+ +|||+++|++|+++|++|++++|+.+..+ ..+++.+..+ ....+++|++|. +++.++++
T Consensus 6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~-~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~ 82 (258)
T PRK07533 6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARP-YVEPLAEELD--APIFLPLDVREPGQLEAVFARI 82 (258)
T ss_pred cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHH-HHHHHHHhhc--cceEEecCcCCHHHHHHHHHHH
Confidence 44679999999999 49999999999999999999999864322 2233333221 245789999985 35566666
Q ss_pred HHHHcCCCeEEEEEccCCCCCc--cccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCC
Q 020854 125 KEAIEGLDVGVLINNVGISYPY--ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD 202 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~~~~~--~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~ 202 (320)
.+.+++ +|++|||||..... ..++.+.+.++|++++++|+.|++++++.++|.|. ++|+||++||..+.. +.
T Consensus 83 ~~~~g~--ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~--~~g~Ii~iss~~~~~--~~ 156 (258)
T PRK07533 83 AEEWGR--LDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMT--NGGSLLTMSYYGAEK--VV 156 (258)
T ss_pred HHHcCC--CCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhc--cCCEEEEEecccccc--CC
Confidence 666664 56999999986421 24577889999999999999999999999999995 358999999998877 67
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHH
Q 020854 203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHS 282 (320)
Q Consensus 203 ~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~ 282 (320)
++++.|++||+|+.+|+++|+.|++++||+||+|+||+++|+|.... ...++..+......+.++...|+++..
T Consensus 157 ~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~------~~~~~~~~~~~~~~p~~r~~~p~dva~ 230 (258)
T PRK07533 157 ENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGI------DDFDALLEDAAERAPLRRLVDIDDVGA 230 (258)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhcc------CCcHHHHHHHHhcCCcCCCCCHHHHHH
Confidence 88899999999999999999999999999999999999999986531 111233344444555567777888888
Q ss_pred HHHHHHh
Q 020854 283 FIWGVLS 289 (320)
Q Consensus 283 ~~~~l~~ 289 (320)
++.++++
T Consensus 231 ~~~~L~s 237 (258)
T PRK07533 231 VAAFLAS 237 (258)
T ss_pred HHHHHhC
Confidence 7777765
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=264.36 Aligned_cols=216 Identities=21% Similarity=0.242 Sum_probs=185.0
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
+.||+++||||++|||+++|++|+++|++|++++|+.+++++..+++... +.++..+.+|++|. +.+.++++.+.+
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 81 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE--GFDVHGVMCDVRHREEVTHLADEAFRLL 81 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 56999999999999999999999999999999999999988888888654 44688899999985 244555555555
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccccCCCCCchh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
++ +|+||||||.... +++.+.+.+++++++++|+.|++++++.++|.|.+++ +|+||++||.++.. +.++...
T Consensus 82 g~--id~li~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~--~~~~~~~ 155 (275)
T PRK05876 82 GH--VDVVFSNAGIVVG--GPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLV--PNAGLGA 155 (275)
T ss_pred CC--CCEEEECCCcCCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhcc--CCCCCch
Confidence 54 6699999998654 6688899999999999999999999999999998765 78999999999987 6788899
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcccc--------------------CCCCCCCHHHHHHHHHH
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKR--------------------SSFFVPSTDVYARAAMR 267 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~--------------------~~~~~~~~~~~a~~i~~ 267 (320)
|++||+|+.+|+++|+.|++++||+|++|+||+++|++..... ......+|+++|+.++.
T Consensus 156 Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 235 (275)
T PRK05876 156 YGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTAD 235 (275)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999864210 01124799999999999
Q ss_pred HhCCCCc
Q 020854 268 WIGYEPC 274 (320)
Q Consensus 268 ~l~~~~~ 274 (320)
++..++.
T Consensus 236 ai~~~~~ 242 (275)
T PRK05876 236 AILANRL 242 (275)
T ss_pred HHHcCCe
Confidence 9988853
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-36 Score=263.71 Aligned_cols=225 Identities=24% Similarity=0.306 Sum_probs=178.6
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||+++||||++|||++++++|+++|++|++++|+.+++++..+++... +.++..+.+|++|. +++.++++.+.
T Consensus 6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (253)
T PRK05867 6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTS--GGKVVPVCCDVSQHQQVTSMLDQVTAE 83 (253)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 466999999999999999999999999999999999999998888888664 34678899999985 34555666666
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccccCCCCCch
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
+++ +|+||||||.... .++.+.+.+++++++++|+.+++.+++.++|.|.+++ +|+||++||.++......+...
T Consensus 84 ~g~--id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~ 159 (253)
T PRK05867 84 LGG--IDIAVCNAGIITV--TPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVS 159 (253)
T ss_pred hCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCcc
Confidence 665 5699999998654 5677889999999999999999999999999997765 5899999999886521122457
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHH
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWG 286 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~ 286 (320)
.|++||+|+++|+++++.|++++||+||+|+||+++|++.... + +..+......+.++...|.++..++.+
T Consensus 160 ~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~--------~-~~~~~~~~~~~~~r~~~p~~va~~~~~ 230 (253)
T PRK05867 160 HYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPY--------T-EYQPLWEPKIPLGRLGRPEELAGLYLY 230 (253)
T ss_pred chHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccc--------h-HHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 8999999999999999999999999999999999999986531 1 111222233334455556666666555
Q ss_pred HHh
Q 020854 287 VLS 289 (320)
Q Consensus 287 l~~ 289 (320)
+++
T Consensus 231 L~s 233 (253)
T PRK05867 231 LAS 233 (253)
T ss_pred HcC
Confidence 543
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=262.47 Aligned_cols=192 Identities=23% Similarity=0.295 Sum_probs=167.2
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||+++||||++|||++++++|+++|++|++++|+.+++++..+++.+. +.++..+.+|+++. +++.++++.++
T Consensus 3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (254)
T PRK07478 3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAE--GGEAVALAGDVRDEAYAKALVALAVER 80 (254)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 356899999999999999999999999999999999999988888888664 34678889999975 24555666666
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
+++ +|+||||||...+ ..++.+.+.+++++++++|+.+++.+++.++|.|++++.++||++||.++... +.++...
T Consensus 81 ~~~--id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~-~~~~~~~ 156 (254)
T PRK07478 81 FGG--LDIAFNNAGTLGE-MGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTA-GFPGMAA 156 (254)
T ss_pred cCC--CCEEEECCCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhcc-CCCCcch
Confidence 664 6699999998643 24677889999999999999999999999999999888899999999988631 4677899
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
|++||+|+++++++++.|+.++||+|++|+||+++|+|..
T Consensus 157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~ 196 (254)
T PRK07478 157 YAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGR 196 (254)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccc
Confidence 9999999999999999999999999999999999999865
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=265.41 Aligned_cols=188 Identities=28% Similarity=0.432 Sum_probs=163.9
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
++||+++||||++|||+++|++|+++|++|++++|+ +++++..+++.+. +.++..+.+|+++. ++..++++.+.+
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSN--GGKAKAYHVDISDEQQVKDFASEIKEQF 80 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 469999999999999999999999999999999999 7788878777653 34688899999985 245556666666
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
+. +|+||||||.... ..++.+.+.+.+++++++|+.|++.+++.++|+|.+++ |+||++||.++.. +.++.+.|
T Consensus 81 g~--id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~--~~~~~~~Y 154 (272)
T PRK08589 81 GR--VDVLFNNAGVDNA-AGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQA--ADLYRSGY 154 (272)
T ss_pred CC--cCEEEECCCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcC--CCCCCchH
Confidence 64 5699999998642 24577889999999999999999999999999998664 8999999999987 66788999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
++||+|+++|+++++.|++++||+||+|+||+|+|++..
T Consensus 155 ~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~ 193 (272)
T PRK08589 155 NAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVD 193 (272)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhh
Confidence 999999999999999999999999999999999999864
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-36 Score=265.56 Aligned_cols=226 Identities=19% Similarity=0.145 Sum_probs=177.6
Q ss_pred ccCCCEEEEECCC--CcHHHHHHHHHHHcCCeEEEEeCCHH--HHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHH
Q 020854 50 RKYGSWALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRNPD--KLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVER 123 (320)
Q Consensus 50 ~~~gk~vlITGas--~GIG~ala~~l~~~G~~Vil~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~ 123 (320)
+++||+++||||+ +|||+++|++|+++|++|++++|+.+ +.++..+++.+.. ..+..+++|++|. +++.+++
T Consensus 3 ~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~v~~~~~~ 80 (258)
T PRK07370 3 DLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPL--NPSLFLPCDVQDDAQIEETFET 80 (258)
T ss_pred ccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhcc--CcceEeecCcCCHHHHHHHHHH
Confidence 3569999999986 89999999999999999999876543 3445555565432 2467889999985 3556666
Q ss_pred HHHHHcCCCeEEEEEccCCCCC--ccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCC
Q 020854 124 IKEAIEGLDVGVLINNVGISYP--YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS 201 (320)
Q Consensus 124 ~~~~~~~~~id~lI~nAG~~~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~ 201 (320)
+.+.+++ +|+||||||.... ...++.+.+.++|++++++|+.|++.+++.++|.|.+ +|+||++||..+.. +
T Consensus 81 ~~~~~g~--iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~g~Iv~isS~~~~~--~ 154 (258)
T PRK07370 81 IKQKWGK--LDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--GGSIVTLTYLGGVR--A 154 (258)
T ss_pred HHHHcCC--CCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--CCeEEEEecccccc--C
Confidence 6666664 5699999997642 1246788899999999999999999999999999964 58999999999987 6
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchH
Q 020854 202 DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPH 281 (320)
Q Consensus 202 ~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~ 281 (320)
.|++..|++||+|+.+|+++|+.|++++||+||+|+||+++|++..... ..++ ..+.+....+.++...|.++.
T Consensus 155 ~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~-----~~~~-~~~~~~~~~p~~r~~~~~dva 228 (258)
T PRK07370 155 IPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVG-----GILD-MIHHVEEKAPLRRTVTQTEVG 228 (258)
T ss_pred CcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccc-----cchh-hhhhhhhcCCcCcCCCHHHHH
Confidence 7889999999999999999999999999999999999999999864210 0122 223333344555777788888
Q ss_pred HHHHHHHh
Q 020854 282 SFIWGVLS 289 (320)
Q Consensus 282 ~~~~~l~~ 289 (320)
.++.|+++
T Consensus 229 ~~~~fl~s 236 (258)
T PRK07370 229 NTAAFLLS 236 (258)
T ss_pred HHHHHHhC
Confidence 88777765
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-35 Score=256.99 Aligned_cols=238 Identities=21% Similarity=0.258 Sum_probs=202.7
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
+|+++||||++|||.+++++|+++|++|++++|+.++.++..+++...+ +.++.++++|++|. +.++++.+.... +
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~--~~~~~~~~~~~~-~ 76 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARG-AVAVSTHELDILDT--ASHAAFLDSLPA-L 76 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhc-CCeEEEEecCCCCh--HHHHHHHHHHhh-c
Confidence 3689999999999999999999999999999999998887777776543 45788999999986 455555554433 3
Q ss_pred eEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHHHH
Q 020854 133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATK 212 (320)
Q Consensus 133 id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asK 212 (320)
+|++|||+|.... .++.+.+.+++.+++++|+.+++++++.+.|.|.+++.++||++||..+.. +.++...|+++|
T Consensus 77 ~d~vv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~Y~~sK 152 (243)
T PRK07102 77 PDIVLIAVGTLGD--QAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDR--GRASNYVYGSAK 152 (243)
T ss_pred CCEEEECCcCCCC--cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccC--CCCCCcccHHHH
Confidence 5799999998654 456788899999999999999999999999999888889999999998877 567788999999
Q ss_pred HHHHHHHHHHHHHHccCCceEEEEeccceecCCCcccc-CCCCCCCHHHHHHHHHHHhCCC-CcccCCchHHHHHHHHhh
Q 020854 213 AYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKR-SSFFVPSTDVYARAAMRWIGYE-PCCTPYWPHSFIWGVLSI 290 (320)
Q Consensus 213 aal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~~a~~i~~~l~~~-~~~~~~~~~~~~~~l~~~ 290 (320)
+++.+++++++.|+.+.||+|++|+||+++|++..... +.....+|+++++.+++.+.++ ..+.+.+..+....+.++
T Consensus 153 ~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~a~~i~~~~~~~~~~i~~~~~~~~~~~~~~~ 232 (243)
T PRK07102 153 AALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLKLPGPLTAQPEEVAKDIFRAIEKGKDVIYTPWFWRLIMLIIRS 232 (243)
T ss_pred HHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhccCCCccccCCHHHHHHHHHHHHhCCCCEEEcCchHHHHHHHHHh
Confidence 99999999999999999999999999999999876532 3445689999999999999987 445666777778888899
Q ss_pred chHHHHHH
Q 020854 291 LPEKLIDA 298 (320)
Q Consensus 291 ~P~~~~~~ 298 (320)
+|.++.++
T Consensus 233 ~p~~~~~~ 240 (243)
T PRK07102 233 IPEPIFKR 240 (243)
T ss_pred CCHHHHhh
Confidence 99888774
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-35 Score=288.80 Aligned_cols=241 Identities=22% Similarity=0.250 Sum_probs=204.7
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
...+++++|||||||||+++|++|+++|++|++++|+.+++++..+++++. +..+..+.+|++|. +.+.++++.+.
T Consensus 312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 389 (582)
T PRK05855 312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAA--GAVAHAYRVDVSDADAMEAFAEWVRAE 389 (582)
T ss_pred cCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 356899999999999999999999999999999999999998888888665 34688899999985 24455555555
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccccCCCCCch
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
++. +|+||||||.... +++.+.+.+++++++++|+.|++++++.++|.|.+++ +|+||++||.++.. +.++..
T Consensus 390 ~g~--id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~~ 463 (582)
T PRK05855 390 HGV--PDIVVNNAGIGMA--GGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYA--PSRSLP 463 (582)
T ss_pred cCC--CcEEEECCccCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc--CCCCCc
Confidence 554 6699999998764 5678899999999999999999999999999998876 58999999999988 678899
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcccc-------------------CCCCCCCHHHHHHHHHH
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKR-------------------SSFFVPSTDVYARAAMR 267 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~-------------------~~~~~~~~~~~a~~i~~ 267 (320)
.|++||+|+++++++|+.|++++||+|++|+||+|+|+|..... ......+||++|+.++.
T Consensus 464 ~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~ 543 (582)
T PRK05855 464 AYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVAKAIVD 543 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999866311 01123589999999999
Q ss_pred HhCCC-CcccCCchHHHHHHHHhhchHHHHHH
Q 020854 268 WIGYE-PCCTPYWPHSFIWGVLSILPEKLIDA 298 (320)
Q Consensus 268 ~l~~~-~~~~~~~~~~~~~~l~~~~P~~~~~~ 298 (320)
.+.++ +.+...+...+..++.+++|.++...
T Consensus 544 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 575 (582)
T PRK05855 544 AVKRNKAVVPVTPEAHAGYGVSRFAPWLLRSL 575 (582)
T ss_pred HHHcCCCEEEeCHHHHHHHHHHHHChHHHHHH
Confidence 99987 55556677788888999999766654
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=264.55 Aligned_cols=230 Identities=18% Similarity=0.189 Sum_probs=183.8
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeC-CHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
+++||+++||||++|||+++|++|+++|++|++++| +.+++++..+++.... +.++..+++|++|. +++.++++.+
T Consensus 5 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (260)
T PRK08416 5 EMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKY-GIKAKAYPLNILEPETYKELFKKIDE 83 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 356999999999999999999999999999998865 6677777777775432 45788999999985 2445555555
Q ss_pred HHcCCCeEEEEEccCCCCC----ccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCC
Q 020854 127 AIEGLDVGVLINNVGISYP----YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD 202 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~----~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~ 202 (320)
.+++ +|+||||||.... ...++.+.+.+++++++++|+.+++.+++.++|.|.+++.|+||++||..+.. +.
T Consensus 84 ~~g~--id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~ 159 (260)
T PRK08416 84 DFDR--VDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLV--YI 159 (260)
T ss_pred hcCC--ccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEecccccc--CC
Confidence 5554 6699999987532 12456788899999999999999999999999999888789999999998877 67
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHH
Q 020854 203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHS 282 (320)
Q Consensus 203 ~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~ 282 (320)
+++..|++||+|+++|+++|+.|++++||+|++|+||+++|+|.... ...++..+......+.++...|.+...
T Consensus 160 ~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~------~~~~~~~~~~~~~~~~~r~~~p~~va~ 233 (260)
T PRK08416 160 ENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAF------TNYEEVKAKTEELSPLNRMGQPEDLAG 233 (260)
T ss_pred CCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhc------cCCHHHHHHHHhcCCCCCCCCHHHHHH
Confidence 88899999999999999999999999999999999999999986531 122333344444445556677777777
Q ss_pred HHHHHHhh
Q 020854 283 FIWGVLSI 290 (320)
Q Consensus 283 ~~~~l~~~ 290 (320)
.+.++++-
T Consensus 234 ~~~~l~~~ 241 (260)
T PRK08416 234 ACLFLCSE 241 (260)
T ss_pred HHHHHcCh
Confidence 77776653
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=263.26 Aligned_cols=224 Identities=17% Similarity=0.099 Sum_probs=173.4
Q ss_pred cCCCEEEEECCCC--cHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 51 KYGSWALVTGPTD--GIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 51 ~~gk~vlITGas~--GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++||+++||||++ |||+++|++|+++|++|++++|+ +++++..+++....+ ....+.+|++|. +++.++++.+
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~ 80 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLG--SDIVLPCDVAEDASIDAMFAELGK 80 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhccC--CceEeecCCCCHHHHHHHHHHHHh
Confidence 4699999999986 99999999999999999999998 445555666655432 356788999985 3455555555
Q ss_pred HHcCCCeEEEEEccCCCCCc---cccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCC
Q 020854 127 AIEGLDVGVLINNVGISYPY---ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP 203 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~---~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~ 203 (320)
.+++ +|++|||||+.... ..++.+.+.++|++++++|+.|++.+++.+.|.+. ++|+||++||..+.. +.+
T Consensus 81 ~~g~--iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~g~Iv~iss~~~~~--~~~ 154 (262)
T PRK07984 81 VWPK--FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN--PGSALLTLSYLGAER--AIP 154 (262)
T ss_pred hcCC--CCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhc--CCcEEEEEecCCCCC--CCC
Confidence 5654 66999999985421 11256788999999999999999999999999663 358999999998876 678
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHH
Q 020854 204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSF 283 (320)
Q Consensus 204 ~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~ 283 (320)
++.+|++||+|+.+|+++|+.|++++||+||+|+||+++|++.... .+.++..+......+.++...|.++...
T Consensus 155 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~------~~~~~~~~~~~~~~p~~r~~~pedva~~ 228 (262)
T PRK07984 155 NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI------KDFRKMLAHCEAVTPIRRTVTIEDVGNS 228 (262)
T ss_pred CcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcC------CchHHHHHHHHHcCCCcCCCCHHHHHHH
Confidence 8899999999999999999999999999999999999999875321 1112223333344455566677777777
Q ss_pred HHHHHh
Q 020854 284 IWGVLS 289 (320)
Q Consensus 284 ~~~l~~ 289 (320)
+.|+++
T Consensus 229 ~~~L~s 234 (262)
T PRK07984 229 AAFLCS 234 (262)
T ss_pred HHHHcC
Confidence 776654
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=264.20 Aligned_cols=225 Identities=17% Similarity=0.110 Sum_probs=171.0
Q ss_pred cccCCCEEEEECCC--CcHHHHHHHHHHHcCCeEEEEeCCH---HHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHH
Q 020854 49 LRKYGSWALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRNP---DKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGV 121 (320)
Q Consensus 49 ~~~~gk~vlITGas--~GIG~ala~~l~~~G~~Vil~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~ 121 (320)
+++.||+++||||+ +|||+++|++|+++|++|++++|+. +++++..+++ .+.++..+++|++|. +++.+
T Consensus 3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~d~~~v~~~~ 78 (257)
T PRK08594 3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTL----EGQESLLLPCDVTSDEEITACF 78 (257)
T ss_pred cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHc----CCCceEEEecCCCCHHHHHHHH
Confidence 34679999999997 8999999999999999999998763 3344443333 235678899999985 34555
Q ss_pred HHHHHHHcCCCeEEEEEccCCCCC--ccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccccc
Q 020854 122 ERIKEAIEGLDVGVLINNVGISYP--YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI 199 (320)
Q Consensus 122 ~~~~~~~~~~~id~lI~nAG~~~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~ 199 (320)
+++.+.+++ +|++|||||+... ...++.+.+.++|++++++|+.+++.+++.++|.|.+ +|+||++||.++..
T Consensus 79 ~~~~~~~g~--ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~~~- 153 (257)
T PRK08594 79 ETIKEEVGV--IHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--GGSIVTLTYLGGER- 153 (257)
T ss_pred HHHHHhCCC--ccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--CceEEEEcccCCcc-
Confidence 666666664 5699999997642 1245678899999999999999999999999999953 58999999999987
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCc
Q 020854 200 PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYW 279 (320)
Q Consensus 200 ~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~ 279 (320)
+.++++.|++||+|+.+|+++|+.|++++||+||+|+||+++|++..... ..++..+.+.+..+.++...|++
T Consensus 154 -~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~------~~~~~~~~~~~~~p~~r~~~p~~ 226 (257)
T PRK08594 154 -VVQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVG------GFNSILKEIEERAPLRRTTTQEE 226 (257)
T ss_pred -CCCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhc------cccHHHHHHhhcCCccccCCHHH
Confidence 67888999999999999999999999999999999999999999754210 00111122222333345555666
Q ss_pred hHHHHHHHHh
Q 020854 280 PHSFIWGVLS 289 (320)
Q Consensus 280 ~~~~~~~l~~ 289 (320)
....+.++++
T Consensus 227 va~~~~~l~s 236 (257)
T PRK08594 227 VGDTAAFLFS 236 (257)
T ss_pred HHHHHHHHcC
Confidence 6665555544
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-35 Score=260.74 Aligned_cols=224 Identities=17% Similarity=0.118 Sum_probs=170.4
Q ss_pred cCCCEEEEECC--CCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 51 KYGSWALVTGP--TDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 51 ~~gk~vlITGa--s~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++||+++|||| ++|||+++|++|+++|++|++++|.... ++..+++.+..+. ...+++|++|. +++.++.+.+
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~Dv~d~~~v~~~~~~~~~ 80 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRF-KDRITEFAAEFGS--DLVFPCDVASDEQIDALFASLGQ 80 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHH-HHHHHHHHHhcCC--cceeeccCCCHHHHHHHHHHHHH
Confidence 46999999996 6899999999999999999998765221 2222333332222 34688999985 3566666666
Q ss_pred HHcCCCeEEEEEccCCCCCc---cccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCC
Q 020854 127 AIEGLDVGVLINNVGISYPY---ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP 203 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~---~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~ 203 (320)
++++ +|++|||||..... ...+++.+.++|++++++|+.+++++++.++|+|. ++|+||++||.++.. +.+
T Consensus 81 ~~g~--iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~--~~g~Ii~iss~~~~~--~~~ 154 (260)
T PRK06997 81 HWDG--LDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLS--DDASLLTLSYLGAER--VVP 154 (260)
T ss_pred HhCC--CcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcC--CCceEEEEecccccc--CCC
Confidence 6764 56999999986431 11245688899999999999999999999999994 458999999999877 678
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHH
Q 020854 204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSF 283 (320)
Q Consensus 204 ~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~ 283 (320)
++..|++||+|+.+|+++|+.|++++||+||+|+||+++|++.... .+.++..+.+....+.++...|+++..+
T Consensus 155 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~------~~~~~~~~~~~~~~p~~r~~~pedva~~ 228 (260)
T PRK06997 155 NYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGI------KDFGKILDFVESNAPLRRNVTIEEVGNV 228 (260)
T ss_pred CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccc------cchhhHHHHHHhcCcccccCCHHHHHHH
Confidence 8899999999999999999999999999999999999999875421 1112223333344455566777777777
Q ss_pred HHHHHh
Q 020854 284 IWGVLS 289 (320)
Q Consensus 284 ~~~l~~ 289 (320)
+.++++
T Consensus 229 ~~~l~s 234 (260)
T PRK06997 229 AAFLLS 234 (260)
T ss_pred HHHHhC
Confidence 777665
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-35 Score=259.05 Aligned_cols=229 Identities=25% Similarity=0.302 Sum_probs=180.9
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHH-HHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD-KLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERI 124 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~ 124 (320)
-++++||+++||||++|||+++|++|+++|++|++++|+.+ .+++..+++... +.++..+.+|++|. +++.++++
T Consensus 3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~ 80 (254)
T PRK06114 3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAA--GRRAIQIAADVTSKADLRAAVART 80 (254)
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHH
Confidence 34577999999999999999999999999999999999764 456666777554 34677889999985 24455555
Q ss_pred HHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCC
Q 020854 125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL 204 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~ 204 (320)
.+.+++ +|+||||||.... .++.+.+.+++++++++|+.+++.+++.++|.|.+++.|+||++||.++....+.+.
T Consensus 81 ~~~~g~--id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~ 156 (254)
T PRK06114 81 EAELGA--LTLAVNAAGIANA--NPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLL 156 (254)
T ss_pred HHHcCC--CCEEEECCCCCCC--CChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCC
Confidence 666664 5699999998654 567788999999999999999999999999999888889999999999876322234
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHH
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFI 284 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~ 284 (320)
.+.|++||+|+.+++++++.|+.++||+||+|+||+++|+|.... ...+..+......+.++...|++....+
T Consensus 157 ~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~-------~~~~~~~~~~~~~p~~r~~~~~dva~~~ 229 (254)
T PRK06114 157 QAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRP-------EMVHQTKLFEEQTPMQRMAKVDEMVGPA 229 (254)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccc-------cchHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 688999999999999999999999999999999999999987521 1111122333444455666677777766
Q ss_pred HHHHh
Q 020854 285 WGVLS 289 (320)
Q Consensus 285 ~~l~~ 289 (320)
.|+++
T Consensus 230 ~~l~s 234 (254)
T PRK06114 230 VFLLS 234 (254)
T ss_pred HHHcC
Confidence 66554
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-35 Score=237.69 Aligned_cols=186 Identities=28% Similarity=0.392 Sum_probs=162.9
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++..|.++|||||++|||+++|++|.+.|.+||+++|+++++++..++. ..++...||+.|. .+++++.+.+
T Consensus 1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~------p~~~t~v~Dv~d~~~~~~lvewLkk 74 (245)
T COG3967 1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN------PEIHTEVCDVADRDSRRELVEWLKK 74 (245)
T ss_pred CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC------cchheeeecccchhhHHHHHHHHHh
Confidence 3567999999999999999999999999999999999999999877653 4577788888874 4678888888
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
+++.++ +||||||+.....-.-.+...++.++.+++|+.+|+++++.++|++.+++.+.||+|||..++. |....+
T Consensus 75 ~~P~lN--vliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafv--Pm~~~P 150 (245)
T COG3967 75 EYPNLN--VLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFV--PMASTP 150 (245)
T ss_pred hCCchh--eeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccC--cccccc
Confidence 888766 9999999987521111244566678889999999999999999999999999999999999998 778889
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecC
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATK 244 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~ 244 (320)
.||++|+|++.|+.+|+..++..+|.|--+.|..|+|+
T Consensus 151 vYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 151 VYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred cchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence 99999999999999999999999999999999999997
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=258.06 Aligned_cols=236 Identities=28% Similarity=0.333 Sum_probs=193.6
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHc
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIE 129 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~ 129 (320)
++|+++||||+||||++++++|+++|++|++++|+.+++++..+ ..+..+.+|++|. ++..++++.+.++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~--------~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 73 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS--------LGVHPLSLDVTDEASIKAAVDTIIAEEG 73 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh--------CCCeEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 47999999999999999999999999999999999887654321 1367889999985 2344455555555
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhH
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA 209 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~ 209 (320)
++|+||||||.... +++.+.+.++++.++++|+.|++.+++.++|.|++++.|+||++||..+.. +.+....|+
T Consensus 74 --~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~--~~~~~~~Y~ 147 (273)
T PRK06182 74 --RIDVLVNNAGYGSY--GAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKI--YTPLGAWYH 147 (273)
T ss_pred --CCCEEEECCCcCCC--CchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcC--CCCCccHhH
Confidence 46699999998754 567888999999999999999999999999999988889999999998876 567778899
Q ss_pred HHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc---------------------------cCCCCCCCHHHHH
Q 020854 210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK---------------------------RSSFFVPSTDVYA 262 (320)
Q Consensus 210 asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~---------------------------~~~~~~~~~~~~a 262 (320)
+||+++++|+++++.|+++.||+|++|+||+++|++.... .+.....+|+++|
T Consensus 148 ~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA 227 (273)
T PRK06182 148 ATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIA 227 (273)
T ss_pred HHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHHH
Confidence 9999999999999999999999999999999999985310 0112346999999
Q ss_pred HHHHHHhCCC---CcccCCchHHHHHHHHhhchHHHHHHHHH
Q 020854 263 RAAMRWIGYE---PCCTPYWPHSFIWGVLSILPEKLIDAGRL 301 (320)
Q Consensus 263 ~~i~~~l~~~---~~~~~~~~~~~~~~l~~~~P~~~~~~~~~ 301 (320)
+.++..+..+ ....+........++.+++|..+.+++..
T Consensus 228 ~~i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~ 269 (273)
T PRK06182 228 DAISKAVTARRPKTRYAVGFGAKPLIFLRRILPDRAFDRLIM 269 (273)
T ss_pred HHHHHHHhCCCCCceeecCcchHHHHHHHHHCcHHHHHHHHH
Confidence 9999998753 23445556667778899999888776654
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-34 Score=256.19 Aligned_cols=239 Identities=26% Similarity=0.374 Sum_probs=199.5
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
+++|++++||||++|||++++++|+++|++|++++|+.+++++..+++ .. +.++.++.+|++|. +.++++.+...
T Consensus 2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~--~~~~~~~~~D~~d~--~~~~~~~~~~~ 76 (263)
T PRK09072 2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-PY--PGRHRWVVADLTSE--AGREAVLARAR 76 (263)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hc--CCceEEEEccCCCH--HHHHHHHHHHH
Confidence 356899999999999999999999999999999999998888777776 22 45788899999986 33333333322
Q ss_pred C-CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 130 G-LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 130 ~-~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
. .++|++|||||.... .++.+.+.+++++++++|+.|++.+++.++|+|.+++.++||++||..+.. +.++...|
T Consensus 77 ~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~~~Y 152 (263)
T PRK09072 77 EMGGINVLINNAGVNHF--ALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSI--GYPGYASY 152 (263)
T ss_pred hcCCCCEEEECCCCCCc--cccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCc--CCCCccHH
Confidence 1 246799999998653 567788999999999999999999999999999888789999999999987 67888999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcccc------CCCCCCCHHHHHHHHHHHhCCC-CcccCCchH
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKR------SSFFVPSTDVYARAAMRWIGYE-PCCTPYWPH 281 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~------~~~~~~~~~~~a~~i~~~l~~~-~~~~~~~~~ 281 (320)
+++|+++.+++++++.|+.+.||+|++|+||+++|++..... ......+|+++|+.++..+..+ ..++..+++
T Consensus 153 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~va~~i~~~~~~~~~~~~~~~~~ 232 (263)
T PRK09072 153 CASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQALNRALGNAMDDPEDVAAAVLQAIEKERAERWLGWPE 232 (263)
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhcccccccccCCCCCHHHHHHHHHHHHhCCCCEEecCchH
Confidence 999999999999999999999999999999999999865311 1123568999999999999887 455667778
Q ss_pred HHHHHHHhhchHHHHH
Q 020854 282 SFIWGVLSILPEKLID 297 (320)
Q Consensus 282 ~~~~~l~~~~P~~~~~ 297 (320)
.++.++.+++|.++..
T Consensus 233 ~~~~~~~~~~p~~~~~ 248 (263)
T PRK09072 233 KLFVRLNGLLPSLVDR 248 (263)
T ss_pred HHHHHHHHHChHHHHH
Confidence 8888889999986644
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-35 Score=261.82 Aligned_cols=224 Identities=17% Similarity=0.114 Sum_probs=168.7
Q ss_pred cCCCEEEEECCC--CcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 51 KYGSWALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 51 ~~gk~vlITGas--~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++||+++||||+ +|||+++|++|+++|++|++++|+.. ..+..+++.+..+ ....+++|++|. +++.++++.+
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~ 84 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAELG--AFVAGHCDVTDEASIDAVFETLEK 84 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhcC--CceEEecCCCCHHHHHHHHHHHHH
Confidence 468999999997 89999999999999999999988742 2333334433322 245689999985 3555566666
Q ss_pred HHcCCCeEEEEEccCCCCCc--cccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCC
Q 020854 127 AIEGLDVGVLINNVGISYPY--ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL 204 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~--~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~ 204 (320)
+++. +|+||||||+.... ..++.+.+.++|++++++|+.+++.+++.++|+|. ++|+||++||.++.. +.|+
T Consensus 85 ~~g~--iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~--~~g~Iv~iss~~~~~--~~p~ 158 (272)
T PRK08159 85 KWGK--LDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMT--DGGSILTLTYYGAEK--VMPH 158 (272)
T ss_pred hcCC--CcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcC--CCceEEEEecccccc--CCCc
Confidence 6664 66999999986421 24677889999999999999999999999999985 358999999998877 6788
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHH
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFI 284 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~ 284 (320)
+..|++||+|+.+|+++|+.|++++||+||+|+||+++|++.... ...+...+......+.++...|++...++
T Consensus 159 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~------~~~~~~~~~~~~~~p~~r~~~peevA~~~ 232 (272)
T PRK08159 159 YNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGI------GDFRYILKWNEYNAPLRRTVTIEEVGDSA 232 (272)
T ss_pred chhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcC------CcchHHHHHHHhCCcccccCCHHHHHHHH
Confidence 999999999999999999999999999999999999999875421 01111111111123334555666666666
Q ss_pred HHHHh
Q 020854 285 WGVLS 289 (320)
Q Consensus 285 ~~l~~ 289 (320)
.++++
T Consensus 233 ~~L~s 237 (272)
T PRK08159 233 LYLLS 237 (272)
T ss_pred HHHhC
Confidence 66554
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-35 Score=265.07 Aligned_cols=193 Identities=22% Similarity=0.323 Sum_probs=159.5
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH----------HHHHHHHHHHHhhcCCceEEEEEEeCCCC--c
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP----------DKLKDVSDSIQAKYAKTQIKSVVVDFSGD--L 117 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~----------~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~ 117 (320)
+++||+++||||++|||+++|++|++.|++|++++|+. +++++..+++... +.++..+++|++|. +
T Consensus 5 ~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v 82 (305)
T PRK08303 5 PLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA--GGRGIAVQVDHLVPEQV 82 (305)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhc--CCceEEEEcCCCCHHHH
Confidence 35699999999999999999999999999999999984 4556666666543 34577899999985 3
Q ss_pred HHHHHHHHHHHcCCCeEEEEEcc-CCCC--CccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCc
Q 020854 118 DEGVERIKEAIEGLDVGVLINNV-GISY--PYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSG 194 (320)
Q Consensus 118 ~~~~~~~~~~~~~~~id~lI~nA-G~~~--~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~ 194 (320)
+..++++.+.+++ +|+||||| |... ....++.+.+.+++++++++|+.+++.++++++|+|.++++|+||++||.
T Consensus 83 ~~~~~~~~~~~g~--iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~ 160 (305)
T PRK08303 83 RALVERIDREQGR--LDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDG 160 (305)
T ss_pred HHHHHHHHHHcCC--ccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCc
Confidence 5566666666664 66999999 7531 11245678889999999999999999999999999987778999999997
Q ss_pred ccccc-CCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCC
Q 020854 195 AAIVI-PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMA 246 (320)
Q Consensus 195 ~~~~~-~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~ 246 (320)
.+... .+.++...|++||+|+.+|+++|+.|++++||+||+|+||+++|+|.
T Consensus 161 ~~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~ 213 (305)
T PRK08303 161 TAEYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMM 213 (305)
T ss_pred cccccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHH
Confidence 76431 12345678999999999999999999999999999999999999985
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-34 Score=254.45 Aligned_cols=236 Identities=26% Similarity=0.339 Sum_probs=195.2
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHc
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIE 129 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~ 129 (320)
.+++++||||+||||++++++|+++|++|++++|+.++.+. ...+..+++|++|. +++.++.+.+.++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~----------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g 72 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP----------IPGVELLELDVTDDASVQAAVDEVIARAG 72 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----------cCCCeeEEeecCCHHHHHHHHHHHHHhCC
Confidence 36899999999999999999999999999999999765432 23477889999985 2445555555555
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhH
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA 209 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~ 209 (320)
. +|+||||||.... +++.+.+.+++++++++|+.|++.+++.++|.|++++.|+||++||..+.. +.+....|+
T Consensus 73 ~--~d~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~~~Y~ 146 (270)
T PRK06179 73 R--IDVLVNNAGVGLA--GAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFL--PAPYMALYA 146 (270)
T ss_pred C--CCEEEECCCCCCC--cCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccC--CCCCccHHH
Confidence 4 6699999998754 567788999999999999999999999999999988899999999999987 678889999
Q ss_pred HHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccC----------------------CCCCCCHHHHHHHHHH
Q 020854 210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRS----------------------SFFVPSTDVYARAAMR 267 (320)
Q Consensus 210 asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~----------------------~~~~~~~~~~a~~i~~ 267 (320)
+||+++++++++++.|++++||+|++|+||+++|++...... .....+|+++|+.++.
T Consensus 147 ~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ 226 (270)
T PRK06179 147 ASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVK 226 (270)
T ss_pred HHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999998653110 1124689999999999
Q ss_pred HhCCC---CcccCCchHHHHHHHHhhchHHHHHHHHHHH
Q 020854 268 WIGYE---PCCTPYWPHSFIWGVLSILPEKLIDAGRLQF 303 (320)
Q Consensus 268 ~l~~~---~~~~~~~~~~~~~~l~~~~P~~~~~~~~~~~ 303 (320)
.+..+ ....+........++.+++|+++.+++..++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 265 (270)
T PRK06179 227 AALGPWPKMRYTAGGQASLLSKLRRFMPAGAVDKSLRKT 265 (270)
T ss_pred HHcCCCCCeeEecCchHHHHHHHHHHCcHHHHHHHHHHh
Confidence 98765 2234445666777888999998888766543
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=256.05 Aligned_cols=191 Identities=27% Similarity=0.352 Sum_probs=160.4
Q ss_pred EEEEECCCCcHHHHHHHHHHH----cCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 55 WALVTGPTDGIGKSFAFQLAK----TGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~----~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
+++||||++|||+++|++|++ .|++|++++|+.+++++..++++...++..+..+++|++|. +++.++++.+.+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP 81 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence 689999999999999999997 79999999999999999888887644456788999999985 244555555554
Q ss_pred cCC--CeEEEEEccCCCCCccccccCC-CHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC--CcEEEEEcCccccccCCCC
Q 020854 129 EGL--DVGVLINNVGISYPYARFFHEV-DQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK--KGAIVNIGSGAAIVIPSDP 203 (320)
Q Consensus 129 ~~~--~id~lI~nAG~~~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~--~g~Iv~vsS~~~~~~~~~~ 203 (320)
+.. +.|+||||||..........+. +.+++++++++|+.|++.+++.++|.|.+++ +|+||++||.++.. +.+
T Consensus 82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~--~~~ 159 (256)
T TIGR01500 82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQ--PFK 159 (256)
T ss_pred ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCC--CCC
Confidence 432 3469999999754322223333 5788999999999999999999999998653 58999999999987 678
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 204 ~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
+...|++||+|+++|+++|+.|++++||+|++|+||+++|+|..
T Consensus 160 ~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~ 203 (256)
T TIGR01500 160 GWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQ 203 (256)
T ss_pred CchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHH
Confidence 89999999999999999999999999999999999999999875
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=261.57 Aligned_cols=211 Identities=22% Similarity=0.248 Sum_probs=176.6
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH---------HHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP---------DKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDE 119 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~---------~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~ 119 (320)
++||+++||||++|||+++|++|+++|++|++++|+. +++++..+++... +.++..+.+|++|. +++
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~~ 81 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA--GGEAVANGDDIADWDGAAN 81 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc--CCceEEEeCCCCCHHHHHH
Confidence 5699999999999999999999999999999999876 6777777777654 34578889999985 345
Q ss_pred HHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC------CcEEEEEcC
Q 020854 120 GVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK------KGAIVNIGS 193 (320)
Q Consensus 120 ~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~------~g~Iv~vsS 193 (320)
.++++.+.+++ +|+||||||+... .++.+.+.++|++++++|+.|++++++.++|+|.++. .|+||++||
T Consensus 82 ~~~~~~~~~g~--id~lv~nAG~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS 157 (286)
T PRK07791 82 LVDAAVETFGG--LDVLVNNAGILRD--RMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSS 157 (286)
T ss_pred HHHHHHHhcCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCc
Confidence 56666666664 5699999998754 5678899999999999999999999999999997542 379999999
Q ss_pred ccccccCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc-------cCC--CCCCCHHHHHHH
Q 020854 194 GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK-------RSS--FFVPSTDVYARA 264 (320)
Q Consensus 194 ~~~~~~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~-------~~~--~~~~~~~~~a~~ 264 (320)
.++.. +.++...|++||+|+.+|+++|+.|++++||+||+|+|| ++|+|.... .+. ....+||++|+.
T Consensus 158 ~~~~~--~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~~~~~~~~~~~~~~~~~pedva~~ 234 (286)
T PRK07791 158 GAGLQ--GSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVFAEMMAKPEEGEFDAMAPENVSPL 234 (286)
T ss_pred hhhCc--CCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhHHHHHhcCcccccCCCCHHHHHHH
Confidence 99988 778899999999999999999999999999999999999 899986421 111 124588888888
Q ss_pred HHHHhC
Q 020854 265 AMRWIG 270 (320)
Q Consensus 265 i~~~l~ 270 (320)
++..+.
T Consensus 235 ~~~L~s 240 (286)
T PRK07791 235 VVWLGS 240 (286)
T ss_pred HHHHhC
Confidence 887664
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=255.01 Aligned_cols=224 Identities=21% Similarity=0.273 Sum_probs=174.3
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEe-CCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
++||+++||||++|||+++|++|++.|++|++++ |+.++.++..+++... +..+..+++|+++. ++..++++.+.
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN--GGSAFSIGANLESLHGVEALYSSLDNE 79 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhc--CCceEEEecccCCHHHHHHHHHHHHHH
Confidence 3589999999999999999999999999999875 6677777777777654 34577889999974 34445555543
Q ss_pred H----cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCC
Q 020854 128 I----EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP 203 (320)
Q Consensus 128 ~----~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~ 203 (320)
+ +..++|+||||||.... .++.+.+.++|++++++|+.|++.++++++|.|.+ .|+||++||.++.. +.+
T Consensus 80 ~~~~~g~~~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~--~~~ 153 (252)
T PRK12747 80 LQNRTGSTKFDILINNAGIGPG--AFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAATRI--SLP 153 (252)
T ss_pred hhhhcCCCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc--CCeEEEECCccccc--CCC
Confidence 3 22257899999997543 56788899999999999999999999999999964 48999999999987 678
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHh-CCCCcccCCchHH
Q 020854 204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWI-GYEPCCTPYWPHS 282 (320)
Q Consensus 204 ~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l-~~~~~~~~~~~~~ 282 (320)
+...|++||+|+.+++++++.|+.++||+||+|+||+|+|+|..... ..+ . .+...... +.++...|+++..
T Consensus 154 ~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~-----~~~-~-~~~~~~~~~~~~~~~~~~dva~ 226 (252)
T PRK12747 154 DFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELL-----SDP-M-MKQYATTISAFNRLGEVEDIAD 226 (252)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcc-----cCH-H-HHHHHHhcCcccCCCCHHHHHH
Confidence 88999999999999999999999999999999999999999865311 111 1 11122211 2345566666666
Q ss_pred HHHHHHh
Q 020854 283 FIWGVLS 289 (320)
Q Consensus 283 ~~~~l~~ 289 (320)
.+.++++
T Consensus 227 ~~~~l~s 233 (252)
T PRK12747 227 TAAFLAS 233 (252)
T ss_pred HHHHHcC
Confidence 6666544
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=254.65 Aligned_cols=227 Identities=23% Similarity=0.293 Sum_probs=183.7
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
+++.||++|||||++|||++++++|+++|++|++++|+.+++++..+++... +..+..+.+|++|. +++.++.+.+
T Consensus 5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~ 82 (254)
T PRK08085 5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE--GIKAHAAPFNVTHKQEVEAAIEHIEK 82 (254)
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEecCCCCHHHHHHHHHHHHH
Confidence 3467999999999999999999999999999999999999888888887654 34677889999985 2344455555
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
.++. +|++|||||.... .++.+.+.++|++++++|+.+++.+++.+.+.+.+++.++||++||..+.. +.++..
T Consensus 83 ~~~~--id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~~ 156 (254)
T PRK08085 83 DIGP--IDVLINNAGIQRR--HPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSEL--GRDTIT 156 (254)
T ss_pred hcCC--CCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhcc--CCCCCc
Confidence 5554 5699999998653 567788999999999999999999999999999877789999999998877 667788
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHH
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWG 286 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~ 286 (320)
.|++||+|+++++++++.|++++||+||+|+||+++|++.... ...++..+.+....+.++...|+++...+.+
T Consensus 157 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~------~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~ 230 (254)
T PRK08085 157 PYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKAL------VEDEAFTAWLCKRTPAARWGDPQELIGAAVF 230 (254)
T ss_pred chHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhh------ccCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999987531 1112223333344444566666676666666
Q ss_pred HHh
Q 020854 287 VLS 289 (320)
Q Consensus 287 l~~ 289 (320)
+++
T Consensus 231 l~~ 233 (254)
T PRK08085 231 LSS 233 (254)
T ss_pred HhC
Confidence 554
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=254.53 Aligned_cols=226 Identities=20% Similarity=0.227 Sum_probs=181.3
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
.++++||+++||||++|||++++++|+++|++|++++++.. ++..+++.+. +..+..+++|++|. +++.++++.
T Consensus 5 ~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~ 80 (253)
T PRK08993 5 AFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTAL--GRRFLSLTADLRKIDGIPALLERAV 80 (253)
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHH
Confidence 34577999999999999999999999999999999887643 3444455433 44678899999974 355566666
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccccCCCCC
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPL 204 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~~~~~~ 204 (320)
+.+++ +|++|||||.... .++.+.+.+++++++++|+.+++.+++++.|.|.+++ +|+||++||..+.. +.+.
T Consensus 81 ~~~~~--~D~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~ 154 (253)
T PRK08993 81 AEFGH--IDILVNNAGLIRR--EDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQ--GGIR 154 (253)
T ss_pred HHhCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhcc--CCCC
Confidence 66664 5699999998653 5577889999999999999999999999999998764 68999999999887 6677
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHH
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFI 284 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~ 284 (320)
...|++||+|+++++++++.|+.++||+|++|+||+++|++.... .+.++..+.+...++.++...|.+....+
T Consensus 155 ~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~------~~~~~~~~~~~~~~p~~r~~~p~eva~~~ 228 (253)
T PRK08993 155 VPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQL------RADEQRSAEILDRIPAGRWGLPSDLMGPV 228 (253)
T ss_pred CcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhh------ccchHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 889999999999999999999999999999999999999987531 11223334455555556777777777777
Q ss_pred HHHHh
Q 020854 285 WGVLS 289 (320)
Q Consensus 285 ~~l~~ 289 (320)
.++++
T Consensus 229 ~~l~s 233 (253)
T PRK08993 229 VFLAS 233 (253)
T ss_pred HHHhC
Confidence 76665
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-34 Score=254.48 Aligned_cols=230 Identities=23% Similarity=0.241 Sum_probs=183.4
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
++++||+++||||++|||++++++|+++|++|++++|+.+++++..+++.... +.++..+.+|++|. +.++++.+.+
T Consensus 3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~--~~~~~~~~~~ 79 (259)
T PRK06125 3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAH-GVDVAVHALDLSSP--EAREQLAAEA 79 (259)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCH--HHHHHHHHHh
Confidence 34679999999999999999999999999999999999998888888776543 44678899999986 6666676666
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
+. +|++|||||.... .++.+.+.++|++++++|+.+++++++.++|.|.+++.|+||++||..+.. +.+.+..|
T Consensus 80 g~--id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~--~~~~~~~y 153 (259)
T PRK06125 80 GD--IDILVNNAGAIPG--GGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGEN--PDADYICG 153 (259)
T ss_pred CC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccC--CCCCchHh
Confidence 64 5699999998653 578899999999999999999999999999999888789999999999987 66778899
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcccc---CCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHH
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKR---SSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIW 285 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~---~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~ 285 (320)
+++|+|+.+++++++.|+.+.||+|++|+||+++|++..... ......++ +..+......+.++...|.+....+.
T Consensus 154 ~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~va~~~~ 232 (259)
T PRK06125 154 SAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDE-SRWQELLAGLPLGRPATPEEVADLVA 232 (259)
T ss_pred HHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCH-HHHHHHhccCCcCCCcCHHHHHHHHH
Confidence 999999999999999999999999999999999999743210 00001122 22223333334445555666666655
Q ss_pred HHH
Q 020854 286 GVL 288 (320)
Q Consensus 286 ~l~ 288 (320)
++.
T Consensus 233 ~l~ 235 (259)
T PRK06125 233 FLA 235 (259)
T ss_pred HHc
Confidence 554
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=256.94 Aligned_cols=221 Identities=19% Similarity=0.228 Sum_probs=166.6
Q ss_pred cCCCEEEEECC--CCcHHHHHHHHHHHcCCeEEEEeCCH--HHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHH
Q 020854 51 KYGSWALVTGP--TDGIGKSFAFQLAKTGLNLVLVGRNP--DKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERI 124 (320)
Q Consensus 51 ~~gk~vlITGa--s~GIG~ala~~l~~~G~~Vil~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~ 124 (320)
+.||+++|||| |+|||+++|++|+++|++|++++|+. +.+++..+++ +..+..+++|++|. +++.++++
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~i~~~~~~~ 79 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL-----PEPAPVLELDVTNEEHLASLADRV 79 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc-----CCCCcEEeCCCCCHHHHHHHHHHH
Confidence 56899999999 89999999999999999999999864 3344444433 22567889999985 34555555
Q ss_pred HHHHcCCCeEEEEEccCCCCCc--cccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCC
Q 020854 125 KEAIEGLDVGVLINNVGISYPY--ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD 202 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~~~~~--~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~ 202 (320)
.+.+++ +|++|||||+.... ..++.+.+.+++++++++|+.+++.+++.++|+|. ++|+||++||.. .. +.
T Consensus 80 ~~~~g~--iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~--~~g~Iv~is~~~-~~--~~ 152 (256)
T PRK07889 80 REHVDG--LDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMN--EGGSIVGLDFDA-TV--AW 152 (256)
T ss_pred HHHcCC--CcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcc--cCceEEEEeecc-cc--cC
Confidence 665654 66999999986421 13567888999999999999999999999999996 358999998754 33 46
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCC-CcccCCchH
Q 020854 203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYE-PCCTPYWPH 281 (320)
Q Consensus 203 ~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~-~~~~~~~~~ 281 (320)
+.+..|++||+|+.+|+++|+.|++++||+||+|+||+++|+|.... ...++..+.+....+.+ +...|.+++
T Consensus 153 ~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~------~~~~~~~~~~~~~~p~~~~~~~p~evA 226 (256)
T PRK07889 153 PAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAI------PGFELLEEGWDERAPLGWDVKDPTPVA 226 (256)
T ss_pred CccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcc------cCcHHHHHHHHhcCccccccCCHHHHH
Confidence 77889999999999999999999999999999999999999986421 01122222333333333 345566666
Q ss_pred HHHHHHHh
Q 020854 282 SFIWGVLS 289 (320)
Q Consensus 282 ~~~~~l~~ 289 (320)
..+.++++
T Consensus 227 ~~v~~l~s 234 (256)
T PRK07889 227 RAVVALLS 234 (256)
T ss_pred HHHHHHhC
Confidence 66555543
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=255.03 Aligned_cols=229 Identities=21% Similarity=0.175 Sum_probs=184.3
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHcCCC
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEGLD 132 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~ 132 (320)
+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+. ..+..+++|++|. +++.++++.+.++.
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~-- 76 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY---GEVYAVKADLSDKDDLKNLVKEAWELLGG-- 76 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEcCCCCHHHHHHHHHHHHHhcCC--
Confidence 6999999999999999999999999999999999988888888653 2578899999985 24455555555564
Q ss_pred eEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhc-CCCcEEEEEcCccccccCCCCCchhhHHH
Q 020854 133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK-RKKGAIVNIGSGAAIVIPSDPLYSVYAAT 211 (320)
Q Consensus 133 id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~-~~~g~Iv~vsS~~~~~~~~~~~~~~Y~as 211 (320)
+|+||||||.......++.+.+.+++.+.+++|+.+++.+++.++|.|.+ +++|+||++||.++.. +.++...|++|
T Consensus 77 id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~--~~~~~~~y~~s 154 (259)
T PRK08340 77 IDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKE--PMPPLVLADVT 154 (259)
T ss_pred CCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCC--CCCCchHHHHH
Confidence 66999999975432345678888999999999999999999999998864 5679999999999987 67888999999
Q ss_pred HHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccC---CCCCCCHHH-HHHHHHHHhCCCCcccCCchHHHHHHH
Q 020854 212 KAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRS---SFFVPSTDV-YARAAMRWIGYEPCCTPYWPHSFIWGV 287 (320)
Q Consensus 212 Kaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~---~~~~~~~~~-~a~~i~~~l~~~~~~~~~~~~~~~~~l 287 (320)
|+|+.+|+++|+.|++++||+|++|+||+++|++...... .....++++ ..+.+...++.+|...|++++.++.||
T Consensus 155 Kaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~fL 234 (259)
T PRK08340 155 RAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAFL 234 (259)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999998752110 000112222 334455556666888899999988888
Q ss_pred Hhh
Q 020854 288 LSI 290 (320)
Q Consensus 288 ~~~ 290 (320)
++-
T Consensus 235 ~s~ 237 (259)
T PRK08340 235 LSE 237 (259)
T ss_pred cCc
Confidence 763
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=247.57 Aligned_cols=232 Identities=23% Similarity=0.291 Sum_probs=187.8
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCe
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV 133 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 133 (320)
++++|||||+|||++++++|+++|++|++++|+.+++++..+. ..++..+++|++|. +.++++.+.... .+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~------~~~~~~~~~D~~~~--~~~~~~~~~~~~-~~ 72 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ------SANIFTLAFDVTDH--PGTKAALSQLPF-IP 72 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh------cCCCeEEEeeCCCH--HHHHHHHHhccc-CC
Confidence 6899999999999999999999999999999998876654332 23577889999986 566666665543 36
Q ss_pred EEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHHHHH
Q 020854 134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKA 213 (320)
Q Consensus 134 d~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKa 213 (320)
|.+|||||.... .+..+.+.+++++++++|+.|++++++.+.|.|. ++++||++||..+.. +.++...|++||+
T Consensus 73 d~~i~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~~iv~isS~~~~~--~~~~~~~Y~asK~ 146 (240)
T PRK06101 73 ELWIFNAGDCEY--MDDGKVDATLMARVFNVNVLGVANCIEGIQPHLS--CGHRVVIVGSIASEL--ALPRAEAYGASKA 146 (240)
T ss_pred CEEEEcCccccc--CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhh--cCCeEEEEechhhcc--CCCCCchhhHHHH
Confidence 799999997532 2334578899999999999999999999999984 357899999999887 6788899999999
Q ss_pred HHHHHHHHHHHHHccCCceEEEEeccceecCCCcccc-CCCCCCCHHHHHHHHHHHhCCCC-cccCCchHHHHHHHHhhc
Q 020854 214 YIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKR-SSFFVPSTDVYARAAMRWIGYEP-CCTPYWPHSFIWGVLSIL 291 (320)
Q Consensus 214 al~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~~a~~i~~~l~~~~-~~~~~~~~~~~~~l~~~~ 291 (320)
++++|+++++.|+.++||+|++|.||+++|++..... ......+|+++|+.+++.+..++ .+..+....++....+.+
T Consensus 147 a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~~~~~~~~~~~~~a~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~ 226 (240)
T PRK06101 147 AVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNTFAMPMIITVEQASQEIRAQLARGKSHIYFPARFTWLIRLLGLL 226 (240)
T ss_pred HHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCCCCCCcccCHHHHHHHHHHHHhcCCCEEEcChhHHHHHHHHHhC
Confidence 9999999999999999999999999999999976421 22235799999999999998873 343444455666667889
Q ss_pred hHHHHHHHH
Q 020854 292 PEKLIDAGR 300 (320)
Q Consensus 292 P~~~~~~~~ 300 (320)
|..+..++.
T Consensus 227 p~~~~~~~~ 235 (240)
T PRK06101 227 PYAWQGRLV 235 (240)
T ss_pred cHHHHHHHH
Confidence 977665543
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-34 Score=252.86 Aligned_cols=227 Identities=21% Similarity=0.256 Sum_probs=186.2
Q ss_pred ccCCCEEEEECCCC-cHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTD-GIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 50 ~~~gk~vlITGas~-GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
.+.||+++||||+| |||++++++|+++|++|++++|+.+++++..+++++..+..++..+++|+++. ++..++.+.+
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 93 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE 93 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 45689999999985 99999999999999999999999998888888776644445688899999985 2444555555
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccccCCCCCc
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
.++. +|+||||||.... .++.+.+.+++++++++|+.+++.+++.++|.|..++ .|+||++||..+.. +.++.
T Consensus 94 ~~g~--id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~--~~~~~ 167 (262)
T PRK07831 94 RLGR--LDVLVNNAGLGGQ--TPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWR--AQHGQ 167 (262)
T ss_pred HcCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC--CCCCC
Confidence 5554 5699999998654 5678889999999999999999999999999998776 79999999999887 66788
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHH
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIW 285 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~ 285 (320)
..|++||+|+++++++++.|++++||+|++|+||+++|++.... .+++..+.+......++...|++.+.++.
T Consensus 168 ~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~-------~~~~~~~~~~~~~~~~r~~~p~~va~~~~ 240 (262)
T PRK07831 168 AHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKV-------TSAELLDELAAREAFGRAAEPWEVANVIA 240 (262)
T ss_pred cchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccc-------cCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 89999999999999999999999999999999999999987531 12334444444444456677777777777
Q ss_pred HHHh
Q 020854 286 GVLS 289 (320)
Q Consensus 286 ~l~~ 289 (320)
++++
T Consensus 241 ~l~s 244 (262)
T PRK07831 241 FLAS 244 (262)
T ss_pred HHcC
Confidence 7655
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-34 Score=253.67 Aligned_cols=226 Identities=21% Similarity=0.271 Sum_probs=184.6
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++++||++|||||++|||++++++|+++|++|++++|+ ++.++..+.+.+. +..+..+++|+++. ++..++++.+
T Consensus 11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~ 87 (258)
T PRK06935 11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE--GRKVTFVQVDLTKPESAEKVVKEALE 87 (258)
T ss_pred ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 45779999999999999999999999999999999998 5566666666443 34688899999985 2455566666
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
.++. +|++|||||.... .++.+.+.+++++++++|+.+++.+++.++|.|.+++.|+||++||..+.. +.+...
T Consensus 88 ~~g~--id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~ 161 (258)
T PRK06935 88 EFGK--IDILVNNAGTIRR--APLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQ--GGKFVP 161 (258)
T ss_pred HcCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhcc--CCCCch
Confidence 6664 5599999998654 567788899999999999999999999999999988889999999999987 667889
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHH
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWG 286 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~ 286 (320)
.|++||+|+++++++++.|+.++||+||+|+||+++|++..... ..+...+.+...++.++...|.+++..+.|
T Consensus 162 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 235 (258)
T PRK06935 162 AYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIR------ADKNRNDEILKRIPAGRWGEPDDLMGAAVF 235 (258)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcc------cChHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999865311 112223344555666677777788777777
Q ss_pred HHh
Q 020854 287 VLS 289 (320)
Q Consensus 287 l~~ 289 (320)
+++
T Consensus 236 l~s 238 (258)
T PRK06935 236 LAS 238 (258)
T ss_pred HcC
Confidence 665
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=250.52 Aligned_cols=241 Identities=22% Similarity=0.234 Sum_probs=194.9
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHcCC
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEGL 131 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~ 131 (320)
|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+ ......+.+|++|. +++.++++.+.+++
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~- 78 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALG-GTVPEHRALDISDYDAVAAFAADIHAAHGS- 78 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCcceEEEeeCCCHHHHHHHHHHHHHhcCC-
Confidence 579999999999999999999999999999999988888888876543 33456678999975 23444555555554
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC-CCcEEEEEcCccccccCCCCCchhhHH
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSGAAIVIPSDPLYSVYAA 210 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-~~g~Iv~vsS~~~~~~~~~~~~~~Y~a 210 (320)
+|+||||||.... .++.+.+.++++..+++|+.|++.+++.++|.|.++ +.|+||++||..+.. +.++...|++
T Consensus 79 -id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~--~~~~~~~Y~~ 153 (272)
T PRK07832 79 -MDVVMNIAGISAW--GTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLV--ALPWHAAYSA 153 (272)
T ss_pred -CCEEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccC--CCCCCcchHH
Confidence 6699999998643 567889999999999999999999999999999765 368999999998877 6788899999
Q ss_pred HHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcccc-----------------CCCCCCCHHHHHHHHHHHhCCCC
Q 020854 211 TKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKR-----------------SSFFVPSTDVYARAAMRWIGYEP 273 (320)
Q Consensus 211 sKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~-----------------~~~~~~~~~~~a~~i~~~l~~~~ 273 (320)
||+++.+++++++.|+.+.||+|++|+||.++|++..... ......+|+++|+.++..+..++
T Consensus 154 sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~~~~~~~ 233 (272)
T PRK07832 154 SKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDRFRGHAVTPEKAAEKILAGVEKNR 233 (272)
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999865210 01124799999999999998774
Q ss_pred c-ccCCchHHHHHHHHhhchHHHHHHHHH
Q 020854 274 C-CTPYWPHSFIWGVLSILPEKLIDAGRL 301 (320)
Q Consensus 274 ~-~~~~~~~~~~~~l~~~~P~~~~~~~~~ 301 (320)
. ...........++.+++|..+..++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 262 (272)
T PRK07832 234 YLVYTSPDIRALYWFKRKAWWPYSLVMRQ 262 (272)
T ss_pred eEEecCcchHHHHHHHhcCchHHHHHHHH
Confidence 3 344445556677788888765555443
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-34 Score=255.79 Aligned_cols=235 Identities=25% Similarity=0.280 Sum_probs=188.2
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
.+++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++.+. +.++..+++|++|. +...++++.
T Consensus 5 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~ 82 (278)
T PRK08277 5 LFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA--GGEALAVKADVLDKESLEQARQQIL 82 (278)
T ss_pred eeccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHH
Confidence 34577999999999999999999999999999999999998888888877653 34688899999985 244555566
Q ss_pred HHHcCCCeEEEEEccCCCCCc-------------cccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEc
Q 020854 126 EAIEGLDVGVLINNVGISYPY-------------ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIG 192 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~-------------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vs 192 (320)
+.+++ +|++|||||...+. ..++.+.+.+++++++++|+.+++.+++.++|.|.+++.|+||++|
T Consensus 83 ~~~g~--id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~is 160 (278)
T PRK08277 83 EDFGP--CDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINIS 160 (278)
T ss_pred HHcCC--CCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEc
Confidence 66664 55999999975431 1346788899999999999999999999999999888889999999
Q ss_pred CccccccCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCC
Q 020854 193 SGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 193 S~~~~~~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
|.++.. +.++...|++||+|+++++++++.|++++||+||+|+||+++|++.+...... ....++..+.+....+.+
T Consensus 161 S~~~~~--~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~p~~ 237 (278)
T PRK08277 161 SMNAFT--PLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNE-DGSLTERANKILAHTPMG 237 (278)
T ss_pred cchhcC--CCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccc-cccchhHHHHHhccCCcc
Confidence 999988 67888999999999999999999999999999999999999999865311100 011223344444555556
Q ss_pred CcccCCchHHHHHHHHh
Q 020854 273 PCCTPYWPHSFIWGVLS 289 (320)
Q Consensus 273 ~~~~~~~~~~~~~~l~~ 289 (320)
+...|.+.+..+.++++
T Consensus 238 r~~~~~dva~~~~~l~s 254 (278)
T PRK08277 238 RFGKPEELLGTLLWLAD 254 (278)
T ss_pred CCCCHHHHHHHHHHHcC
Confidence 77777777777777655
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-34 Score=250.81 Aligned_cols=228 Identities=23% Similarity=0.283 Sum_probs=180.9
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
+++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++.+. +..+..+++|+++. +++.++++.+
T Consensus 4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (252)
T PRK07035 4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAA--GGKAEALACHIGEMEQIDALFAHIRE 81 (252)
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4567999999999999999999999999999999999998888888887654 34577889999985 2445556666
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
.++. +|++|||||.... ..++.+.+.+++++++++|+.+++.+++.++|++.+++.++|+++||..+.. +.++.+
T Consensus 82 ~~~~--id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~ 156 (252)
T PRK07035 82 RHGR--LDILVNNAAANPY-FGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVS--PGDFQG 156 (252)
T ss_pred HcCC--CCEEEECCCcCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcC--CCCCCc
Confidence 6664 5699999997532 2456788899999999999999999999999999888889999999999987 678889
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHH
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWG 286 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~ 286 (320)
.|++||+++++++++++.|+.++||+|++|+||+++|++..... ..++..+......+.++..+|.+....+.+
T Consensus 157 ~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ 230 (252)
T PRK07035 157 IYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALF------KNDAILKQALAHIPLRRHAEPSEMAGAVLY 230 (252)
T ss_pred chHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCccccccc------CCHHHHHHHHccCCCCCcCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999865311 111222233333333444455555555544
Q ss_pred HHh
Q 020854 287 VLS 289 (320)
Q Consensus 287 l~~ 289 (320)
+++
T Consensus 231 l~~ 233 (252)
T PRK07035 231 LAS 233 (252)
T ss_pred HhC
Confidence 443
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-34 Score=251.30 Aligned_cols=229 Identities=23% Similarity=0.326 Sum_probs=186.2
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++++||+++||||++|||++++++|+++|++|++++|+.+++++..+++....++.++..+.+|+++. ++..++.+.+
T Consensus 5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 84 (257)
T PRK09242 5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVED 84 (257)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 45679999999999999999999999999999999999999888888887765567889999999985 2445566666
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
.+++ +|+||||||.... .++.+.+.+++++++++|+.+++.++++++|+|.+++.++||++||.++.. +.++.+
T Consensus 85 ~~g~--id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~--~~~~~~ 158 (257)
T PRK09242 85 HWDG--LHILVNNAGGNIR--KAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLT--HVRSGA 158 (257)
T ss_pred HcCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCC--CCCCCc
Confidence 6665 5599999998543 557788999999999999999999999999999888889999999999987 677888
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHH
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWG 286 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~ 286 (320)
.|++||+++..++++++.|+.++||+|++|+||+++|++.... ...++..+......+.++...|.+....+.+
T Consensus 159 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ 232 (257)
T PRK09242 159 PYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGP------LSDPDYYEQVIERTPMRRVGEPEEVAAAVAF 232 (257)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccc------cCChHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999987531 1112233333333333455555666655555
Q ss_pred HHh
Q 020854 287 VLS 289 (320)
Q Consensus 287 l~~ 289 (320)
+++
T Consensus 233 l~~ 235 (257)
T PRK09242 233 LCM 235 (257)
T ss_pred HhC
Confidence 443
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=250.24 Aligned_cols=229 Identities=26% Similarity=0.270 Sum_probs=187.5
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
.+.||+++||||++|||.+++++|+++|++|++++|+.+++++..+++.+. +.++..+.+|++|. +++.++++.+.
T Consensus 4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~ 81 (253)
T PRK06172 4 TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREA--GGEALFVACDVTRDAEVKALVEQTIAA 81 (253)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 356999999999999999999999999999999999999888887777654 45688899999985 34555666666
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
+++ +|++|||||.... ..++.+.+.+++++++++|+.+++.+++.++|.+.+++.++||++||..+.. +.++...
T Consensus 82 ~g~--id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~--~~~~~~~ 156 (253)
T PRK06172 82 YGR--LDYAFNNAGIEIE-QGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLG--AAPKMSI 156 (253)
T ss_pred hCC--CCEEEECCCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcc--CCCCCch
Confidence 664 5699999998653 2456788999999999999999999999999999888889999999999988 6788999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHH
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGV 287 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l 287 (320)
|++||+|+++|+++++.|+.++||+|++|+||+++|++.....+ ..++..+......+.++...|.+....+.++
T Consensus 157 Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~p~~ia~~~~~l 231 (253)
T PRK06172 157 YAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYE-----ADPRKAEFAAAMHPVGRIGKVEEVASAVLYL 231 (253)
T ss_pred hHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcc-----cChHHHHHHhccCCCCCccCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999764211 1233344444444445667777777777666
Q ss_pred Hhh
Q 020854 288 LSI 290 (320)
Q Consensus 288 ~~~ 290 (320)
++-
T Consensus 232 ~~~ 234 (253)
T PRK06172 232 CSD 234 (253)
T ss_pred hCc
Confidence 543
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-34 Score=253.27 Aligned_cols=220 Identities=22% Similarity=0.263 Sum_probs=172.4
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||+++||||++|||+++|++|+++|++|++++|+.++ ...+..+++|++|. +++.++++.+.
T Consensus 3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~-------------~~~~~~~~~D~~~~~~i~~~~~~~~~~ 69 (258)
T PRK06398 3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS-------------YNDVDYFKVDVSNKEQVIKGIDYVISK 69 (258)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc-------------cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 3569999999999999999999999999999999998653 12577899999985 34555666666
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
++. +|+||||||.... .++.+.+.++|++++++|+.|++.+++.++|+|.+++.|+||++||.++.. +.++...
T Consensus 70 ~~~--id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~ 143 (258)
T PRK06398 70 YGR--IDILVNNAGIESY--GAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFA--VTRNAAA 143 (258)
T ss_pred cCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhcc--CCCCCch
Confidence 665 5699999998643 678889999999999999999999999999999888889999999999987 6788899
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHH---HHHHhCCCCcccCCchHHHH
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARA---AMRWIGYEPCCTPYWPHSFI 284 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~---i~~~l~~~~~~~~~~~~~~~ 284 (320)
|++||+|+++++++++.|+.+. |+||+|+||+++|++...........+++...+. .....+.++...|.+....+
T Consensus 144 Y~~sKaal~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~ 222 (258)
T PRK06398 144 YVTSKHAVLGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVV 222 (258)
T ss_pred hhhhHHHHHHHHHHHHHHhCCC-CEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHHHHHHHH
Confidence 9999999999999999999875 9999999999999986531111001122222211 12222334555666666666
Q ss_pred HHHHh
Q 020854 285 WGVLS 289 (320)
Q Consensus 285 ~~l~~ 289 (320)
.++++
T Consensus 223 ~~l~s 227 (258)
T PRK06398 223 AFLAS 227 (258)
T ss_pred HHHcC
Confidence 66554
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-34 Score=247.12 Aligned_cols=187 Identities=21% Similarity=0.210 Sum_probs=160.8
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||+++|||||+|||+++|++|+++|++|++++|+.+++++..+++.+. +..+..+++|++|. +++.++++.++
T Consensus 2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (227)
T PRK08862 2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSAL--TDNVYSFQLKDFSQESIRHLFDAIEQQ 79 (227)
T ss_pred CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHHH
Confidence 467999999999999999999999999999999999999999988888664 34578889999875 24555666666
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccccCCCCCch
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
++. ++|++|||||.... ..++.+.+.+++.+.+++|+.+++.+++.++|+|.+++ +|+||++||..+. ++..
T Consensus 80 ~g~-~iD~li~nag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~-----~~~~ 152 (227)
T PRK08862 80 FNR-APDVLVNNWTSSPL-PSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH-----QDLT 152 (227)
T ss_pred hCC-CCCEEEECCccCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC-----CCcc
Confidence 662 36699999986443 35688899999999999999999999999999998764 7999999997553 4467
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCC
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKM 245 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~ 245 (320)
.|++||+|+.+|+++|+.|++++||+||+|+||+++|+.
T Consensus 153 ~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~ 191 (227)
T PRK08862 153 GVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANG 191 (227)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCC
Confidence 899999999999999999999999999999999999984
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=250.80 Aligned_cols=192 Identities=25% Similarity=0.368 Sum_probs=169.3
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
.+++.||+++||||++|||++++++|+++|++|++++|+.+++++..+++... +.++..+++|++|. +++.++++.
T Consensus 5 ~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~ 82 (265)
T PRK07097 5 LFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL--GIEAHGYVCDVTDEDGVQAMVSQIE 82 (265)
T ss_pred ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHH
Confidence 45677999999999999999999999999999999999999888887777654 44688999999985 245555565
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCc
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
+.++. +|+||||||...+ .++.+.+.+++++++++|+.|++.+++.++|+|.+++.|+||++||..+.. +.++.
T Consensus 83 ~~~~~--id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~ 156 (265)
T PRK07097 83 KEVGV--IDILVNNAGIIKR--IPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSEL--GRETV 156 (265)
T ss_pred HhCCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccC--CCCCC
Confidence 55554 6699999998764 567788999999999999999999999999999888889999999998877 66788
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
..|+++|+++.+++++++.|+.+.||+|++|+||+++|++..
T Consensus 157 ~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 198 (265)
T PRK07097 157 SAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTA 198 (265)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchh
Confidence 999999999999999999999999999999999999999864
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=245.54 Aligned_cols=208 Identities=28% Similarity=0.382 Sum_probs=175.4
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCC--CcHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~ 127 (320)
+++||.|++|||.||||++++++|+++|..+.++..+.++. +..+++++.+|..++.+++||+++ +.++.++++.+.
T Consensus 2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~-~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~ 80 (261)
T KOG4169|consen 2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENP-EAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILAT 80 (261)
T ss_pred cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCH-HHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHH
Confidence 56799999999999999999999999999888888777774 456778899999999999999998 346677777777
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC---CcEEEEEcCccccccCCCCC
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK---KGAIVNIGSGAAIVIPSDPL 204 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~---~g~Iv~vsS~~~~~~~~~~~ 204 (320)
++. +|++|||||+.. +.+|++++++|+.|.++-+...+|+|.+++ +|-|||+||+.|.. |.|-
T Consensus 81 fg~--iDIlINgAGi~~----------dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~--P~p~ 146 (261)
T KOG4169|consen 81 FGT--IDILINGAGILD----------DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLD--PMPV 146 (261)
T ss_pred hCc--eEEEEccccccc----------chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccC--cccc
Confidence 775 669999999863 445899999999999999999999998775 57999999999999 8899
Q ss_pred chhhHHHHHHHHHHHHHHHHH--HccCCceEEEEeccceecCCCcccc----------------CCCCCCCHHHHHHHHH
Q 020854 205 YSVYAATKAYIDQFSRSLYVE--YRKSGIDVQCQVPLYVATKMASIKR----------------SSFFVPSTDVYARAAM 266 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~e--l~~~gi~v~~v~PG~v~T~~~~~~~----------------~~~~~~~~~~~a~~i~ 266 (320)
.+.|++||+++.+|+|||+.+ +.+.||++++||||+++|.+..... ......+|+.++..++
T Consensus 147 ~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~~q~~~~~a~~~v 226 (261)
T KOG4169|consen 147 FPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAPKQSPACCAINIV 226 (261)
T ss_pred chhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcccCCHHHHHHHHH
Confidence 999999999999999999987 4678999999999999999876311 1112346667777777
Q ss_pred HHhCCC
Q 020854 267 RWIGYE 272 (320)
Q Consensus 267 ~~l~~~ 272 (320)
++++..
T Consensus 227 ~aiE~~ 232 (261)
T KOG4169|consen 227 NAIEYP 232 (261)
T ss_pred HHHhhc
Confidence 776654
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-33 Score=248.43 Aligned_cols=239 Identities=21% Similarity=0.236 Sum_probs=195.3
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc---C
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE---G 130 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~---~ 130 (320)
|+++|||||+|||++++++|+++|++|++++|+.+++++..+++. +..+..+++|++|. +.++++.+... .
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~--~~v~~~~~~~~~~~~ 75 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG----AGNAWTGALDVTDR--AAWDAALADFAAATG 75 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc----CCceEEEEecCCCH--HHHHHHHHHHHHHcC
Confidence 789999999999999999999999999999999988877766553 45688999999985 33444333321 1
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHH
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA 210 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~a 210 (320)
.++|+||||||.... .++.+.+.+++++++++|+.+++.+++.+.+.|..++.++||++||..+.. +.++...|+.
T Consensus 76 ~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~~~Y~~ 151 (260)
T PRK08267 76 GRLDVLFNNAGILRG--GPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIY--GQPGLAVYSA 151 (260)
T ss_pred CCCCEEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCc--CCCCchhhHH
Confidence 257799999998764 567788999999999999999999999999999888889999999999988 6788899999
Q ss_pred HHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc----c-----cCCCCCCCHHHHHHHHHHHhCCC-Cc-ccCCc
Q 020854 211 TKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI----K-----RSSFFVPSTDVYARAAMRWIGYE-PC-CTPYW 279 (320)
Q Consensus 211 sKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~----~-----~~~~~~~~~~~~a~~i~~~l~~~-~~-~~~~~ 279 (320)
||+++++++++++.|+.++||++++|.||+++|++... . .......+|+++|+.++..+..+ .. .....
T Consensus 152 sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~~~~~~~~~~ 231 (260)
T PRK08267 152 TKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVDAGSTKRLGVRLTPEDVAEAVWAAVQHPTRLHWPVGK 231 (260)
T ss_pred HHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccchhhhhhHhhccCCCCHHHHHHHHHHHHhCCCccEEeeCh
Confidence 99999999999999999999999999999999998663 0 11123468999999999999644 22 23344
Q ss_pred hHHHHHHHHhhchHHHHHHHHHH
Q 020854 280 PHSFIWGVLSILPEKLIDAGRLQ 302 (320)
Q Consensus 280 ~~~~~~~l~~~~P~~~~~~~~~~ 302 (320)
....+.+....+|.++...+...
T Consensus 232 ~~~~~~~~~~~~p~~~~~~~~~~ 254 (260)
T PRK08267 232 QAKLLAFLARLSPGFVRRLINKS 254 (260)
T ss_pred HHHHHHHHHHHChHHHHHHHHHH
Confidence 55677777888998876665543
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-34 Score=258.11 Aligned_cols=228 Identities=16% Similarity=0.140 Sum_probs=160.8
Q ss_pred cccCCCEEEEECCC--CcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHh--------hcCCc-----eEEEEEEeC
Q 020854 49 LRKYGSWALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQA--------KYAKT-----QIKSVVVDF 113 (320)
Q Consensus 49 ~~~~gk~vlITGas--~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~--------~~~~~-----~~~~~~~D~ 113 (320)
..+.||+++||||+ +|||+++|++|+++|++|++.++.+ +++...+.... ...+. ++..++.|+
T Consensus 4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~ 82 (299)
T PRK06300 4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASF 82 (299)
T ss_pred cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhhc
Confidence 45679999999995 9999999999999999999987652 11111111100 00001 111223333
Q ss_pred CCC--------------------cHHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHH
Q 020854 114 SGD--------------------LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173 (320)
Q Consensus 114 ~~~--------------------~~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~ 173 (320)
++. ++..++++.+++++ +|+||||||.......++.+.+.++|++++++|+.|+++++
T Consensus 83 ~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~--lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~ 160 (299)
T PRK06300 83 DTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGH--IDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLL 160 (299)
T ss_pred CCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCC--CcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence 221 35566777777775 55999999975422357889999999999999999999999
Q ss_pred HHHhHhhhcCCCcEEEEEcCccccccCCCCCch-hhHHHHHHHHHHHHHHHHHHcc-CCceEEEEeccceecCCCccccC
Q 020854 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS-VYAATKAYIDQFSRSLYVEYRK-SGIDVQCQVPLYVATKMASIKRS 251 (320)
Q Consensus 174 ~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~-~Y~asKaal~~~~~~l~~el~~-~gi~v~~v~PG~v~T~~~~~~~~ 251 (320)
++++|+|.+ .|+||++||.++.. +.|++. .|++||+|+.+|+++|+.|+++ +||+||+|+||+++|+|....
T Consensus 161 ~a~~p~m~~--~G~ii~iss~~~~~--~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~-- 234 (299)
T PRK06300 161 SHFGPIMNP--GGSTISLTYLASMR--AVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAI-- 234 (299)
T ss_pred HHHHHHhhc--CCeEEEEeehhhcC--cCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcc--
Confidence 999999964 48999999999987 567664 8999999999999999999987 599999999999999986421
Q ss_pred CCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHHHh
Q 020854 252 SFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVLS 289 (320)
Q Consensus 252 ~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l~~ 289 (320)
..+++.-+......+.++...|+++...+.|+++
T Consensus 235 ----~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s 268 (299)
T PRK06300 235 ----GFIERMVDYYQDWAPLPEPMEAEQVGAAAAFLVS 268 (299)
T ss_pred ----cccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 0111222222223333455555555555555543
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=250.96 Aligned_cols=184 Identities=24% Similarity=0.305 Sum_probs=159.8
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++.++++|++|. +++.++++.+.+
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL-----GERARFIATDITDDAAIERAVATVVARF 78 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCeeEEEEecCCCHHHHHHHHHHHHHHh
Confidence 56899999999999999999999999999999999988777766654 34688899999985 245556666666
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
+. +|+||||||.... .. .+.+.+++++++++|+.+++.+++.++|.|. ++.|+||++||.++.. +.++...|
T Consensus 79 g~--id~lv~~ag~~~~--~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~~--~~~~~~~Y 150 (261)
T PRK08265 79 GR--VDILVNLACTYLD--DG-LASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISAKF--AQTGRWLY 150 (261)
T ss_pred CC--CCEEEECCCCCCC--Cc-CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhhcc--CCCCCchh
Confidence 65 5699999998643 22 2568899999999999999999999999997 6679999999999988 67888999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
++||+++.+++++++.|++++||+||+|+||+++|++..
T Consensus 151 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~ 189 (261)
T PRK08265 151 PASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMD 189 (261)
T ss_pred HHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhh
Confidence 999999999999999999999999999999999999864
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-33 Score=248.01 Aligned_cols=244 Identities=27% Similarity=0.281 Sum_probs=200.5
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCc--HHHHHHHHHHHc
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDL--DEGVERIKEAIE 129 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~--~~~~~~~~~~~~ 129 (320)
++|+++||||+||||++++++|+++|++|++++|+.++.++..+++.....+.++..+.+|++|.. +. ++++.+.++
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~ 80 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG 80 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence 578999999999999999999999999999999999888887777665443457889999999851 23 444444444
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhH
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA 209 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~ 209 (320)
++|++|||||...+ .++.+.+.+++++++++|+.+++.+++.++|.|++.+.++||++||..+.. +.++...|+
T Consensus 81 --~id~vv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~--~~~~~~~Y~ 154 (280)
T PRK06914 81 --RIDLLVNNAGYANG--GFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRV--GFPGLSPYV 154 (280)
T ss_pred --CeeEEEECCccccc--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccC--CCCCCchhH
Confidence 47799999998764 567788999999999999999999999999999888889999999998887 677889999
Q ss_pred HHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcccc--------------------------CCCCCCCHHHHHH
Q 020854 210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKR--------------------------SSFFVPSTDVYAR 263 (320)
Q Consensus 210 asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~--------------------------~~~~~~~~~~~a~ 263 (320)
+||+++++++++++.|++++||+|++++||.++|+++.... +.....+|+++|+
T Consensus 155 ~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 234 (280)
T PRK06914 155 SSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDVAN 234 (280)
T ss_pred HhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHHHHH
Confidence 99999999999999999999999999999999999764210 1123468999999
Q ss_pred HHHHHhCCCCccc---CCchHHHHHHHHhhchHHHHHHHHHH
Q 020854 264 AAMRWIGYEPCCT---PYWPHSFIWGVLSILPEKLIDAGRLQ 302 (320)
Q Consensus 264 ~i~~~l~~~~~~~---~~~~~~~~~~l~~~~P~~~~~~~~~~ 302 (320)
.++..+..+.... ......+...+.+++|+.+++++..+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 276 (280)
T PRK06914 235 LIVEIAESKRPKLRYPIGKGVKLMILAKKILPWRLWEYLVLK 276 (280)
T ss_pred HHHHHHcCCCCCcccccCCchHHHHHHHHhcCHHHHHHHHHH
Confidence 9999998774321 22234566667889999888877654
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=239.69 Aligned_cols=222 Identities=21% Similarity=0.287 Sum_probs=194.3
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC--
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL-- 131 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-- 131 (320)
++++|||||+|||+++|.++..+|++|.++.|+.++++++++++.-......+.+..+|+.|- +.+..+.+.++..
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y--~~v~~~~~~l~~~~~ 111 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDY--DSVSKVIEELRDLEG 111 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccH--HHHHHHHhhhhhccC
Confidence 789999999999999999999999999999999999999999987655455588999999765 5555555555322
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccccCCCCCchhhHH
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYAA 210 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~a 210 (320)
++|.+|+|||...+ +.+++.++++++..+++|++|.++++++.+|.|+++. .|+|+.+||.++.. +..++++|++
T Consensus 112 ~~d~l~~cAG~~v~--g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~--~i~GysaYs~ 187 (331)
T KOG1210|consen 112 PIDNLFCCAGVAVP--GLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAML--GIYGYSAYSP 187 (331)
T ss_pred CcceEEEecCcccc--cccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhc--Cccccccccc
Confidence 57899999999886 8899999999999999999999999999999999877 68999999999999 8999999999
Q ss_pred HHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc-----------ccCCCCCCCHHHHHHHHHHHhCCCCcccCCc
Q 020854 211 TKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI-----------KRSSFFVPSTDVYARAAMRWIGYEPCCTPYW 279 (320)
Q Consensus 211 sKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~-----------~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~ 279 (320)
||+|+.+++.+|++|+.++||+|..+.|+.++||-++. ........++|++|++++..+.+++.....+
T Consensus 188 sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii~g~ss~~~~e~~a~~~~~~~~rg~f~~~~~ 267 (331)
T KOG1210|consen 188 SKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKPEETKIIEGGSSVIKCEEMAKAIVKGMKRGNFTVSLG 267 (331)
T ss_pred HHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCchheeeecCCCCCcCHHHHHHHHHhHHhhcCeEEeec
Confidence 99999999999999999999999999999999998873 1222335799999999999999997655554
Q ss_pred hH
Q 020854 280 PH 281 (320)
Q Consensus 280 ~~ 281 (320)
.-
T Consensus 268 ~~ 269 (331)
T KOG1210|consen 268 FT 269 (331)
T ss_pred hH
Confidence 44
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=246.45 Aligned_cols=234 Identities=23% Similarity=0.299 Sum_probs=189.1
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHcCC
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEGL 131 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~ 131 (320)
|+++||||+||||++++++|+++|++|++++|+.+++++.. + ..+..+.+|+++. +++.++.+.+.++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~----~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-- 71 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA----A----AGFTAVQLDVNDGAALARLAEELEAEHG-- 71 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----H----CCCeEEEeeCCCHHHHHHHHHHHHHhcC--
Confidence 78999999999999999999999999999999987765432 1 1356788999985 2334444444444
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHHH
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAAT 211 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~as 211 (320)
++|++|||||.... +++.+.+.+++++.+++|+.|++.+++.++|.|.+ +.|+||++||.++.. +.+....|++|
T Consensus 72 ~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~g~iv~isS~~~~~--~~~~~~~Y~~s 146 (274)
T PRK05693 72 GLDVLINNAGYGAM--GPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRR-SRGLVVNIGSVSGVL--VTPFAGAYCAS 146 (274)
T ss_pred CCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh-cCCEEEEECCccccC--CCCCccHHHHH
Confidence 46699999998653 56778899999999999999999999999999865 468999999999987 67788999999
Q ss_pred HHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccC----------C----------------CCCCCHHHHHHHH
Q 020854 212 KAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRS----------S----------------FFVPSTDVYARAA 265 (320)
Q Consensus 212 Kaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~----------~----------------~~~~~~~~~a~~i 265 (320)
|++++.++++++.|+++.||+|++|+||+++|++...... . ....+|+++|+.+
T Consensus 147 K~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i 226 (274)
T PRK05693 147 KAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQL 226 (274)
T ss_pred HHHHHHHHHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHH
Confidence 9999999999999999999999999999999998763100 0 1135899999999
Q ss_pred HHHhCCCC---cccCCchHHHHHHHHhhchHHHHHHHHHH
Q 020854 266 MRWIGYEP---CCTPYWPHSFIWGVLSILPEKLIDAGRLQ 302 (320)
Q Consensus 266 ~~~l~~~~---~~~~~~~~~~~~~l~~~~P~~~~~~~~~~ 302 (320)
++.+.+++ ...+........++.+++|..+.+++..+
T Consensus 227 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~ 266 (274)
T PRK05693 227 LAAVQQSPRPRLVRLGNGSRALPLLARLLPRGLLDRVLRK 266 (274)
T ss_pred HHHHhCCCCCceEEecCchHHHHHHHHHCcHHHHHHHHHH
Confidence 99998753 24455566677778899998777766653
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-33 Score=247.34 Aligned_cols=226 Identities=22% Similarity=0.343 Sum_probs=182.1
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
++.||+++||||++|||++++++|+++|++|++++|+++++++..+.+.+. +.++..+.+|++|. +++.++++.+.
T Consensus 7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 84 (255)
T PRK07523 7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ--GLSAHALAFDVTDHDAVRAAIDAFEAE 84 (255)
T ss_pred CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CceEEEEEccCCCHHHHHHHHHHHHHh
Confidence 467999999999999999999999999999999999998888877777654 35688899999985 24444555555
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
++. +|+||||||.... .++.+.+.+++++++++|+.+++++++.+.+.|.+++.|+||++||..+.. +.++...
T Consensus 85 ~~~--~d~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~--~~~~~~~ 158 (255)
T PRK07523 85 IGP--IDILVNNAGMQFR--TPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSAL--ARPGIAP 158 (255)
T ss_pred cCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhcc--CCCCCcc
Confidence 554 5699999998754 567888999999999999999999999999999888889999999998877 6778899
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHH
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGV 287 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l 287 (320)
|+++|+++++++++++.|++++||+|++|+||+++|++..... ..++..+.+....+.++...|.+....+.++
T Consensus 159 y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l 232 (255)
T PRK07523 159 YTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALV------ADPEFSAWLEKRTPAGRWGKVEELVGACVFL 232 (255)
T ss_pred HHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhc------cCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999865311 1122223333333444555566666655555
Q ss_pred Hh
Q 020854 288 LS 289 (320)
Q Consensus 288 ~~ 289 (320)
++
T Consensus 233 ~~ 234 (255)
T PRK07523 233 AS 234 (255)
T ss_pred cC
Confidence 43
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-33 Score=246.23 Aligned_cols=224 Identities=25% Similarity=0.293 Sum_probs=174.1
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||+++||||++|||.++|++|+++|++|++++|+.. ++..+.+.+. +.++..+.+|+++. +...++++.+.
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (248)
T TIGR01832 2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEAL--GRRFLSLTADLSDIEAIKALVDSAVEE 77 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 467999999999999999999999999999999999753 3344444433 34688899999985 23444445555
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccccCCCCCch
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
++ ++|++|||||.... .++.+.+.+++++++++|+.+++.+++.++|.|.+++ .|+||++||..+.. +.+...
T Consensus 78 ~~--~~d~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~~ 151 (248)
T TIGR01832 78 FG--HIDILVNNAGIIRR--ADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQ--GGIRVP 151 (248)
T ss_pred cC--CCCEEEECCCCCCC--CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhcc--CCCCCc
Confidence 55 46699999998754 4567888999999999999999999999999998765 78999999999887 567788
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHH
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWG 286 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~ 286 (320)
.|++||+|+++++++++.|+.++||+|++|+||+++|++..... ..++..+.+...++.++...|.+.+..+.+
T Consensus 152 ~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 225 (248)
T TIGR01832 152 SYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALR------ADEDRNAAILERIPAGRWGTPDDIGGPAVF 225 (248)
T ss_pred hhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccc------cChHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999865311 111222233344444455666666665555
Q ss_pred HHh
Q 020854 287 VLS 289 (320)
Q Consensus 287 l~~ 289 (320)
+++
T Consensus 226 l~s 228 (248)
T TIGR01832 226 LAS 228 (248)
T ss_pred HcC
Confidence 544
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-33 Score=252.27 Aligned_cols=225 Identities=21% Similarity=0.175 Sum_probs=176.8
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH--HHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP--DKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++||+++||||++|||+++|++|+++|++|++++|+. +..++..+.+.+. +.++..+.+|++|. +.+.++++.+
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~ 124 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEEC--GRKAVLLPGDLSDEKFARSLVHEAHK 124 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 6789999999999999999999999999999988753 3455555544433 44677899999985 3455566666
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
.++. +|++|||||.... ..++.+.+.++|++++++|+.|++.++++++|+|.+ .|+||++||.++.. +.++..
T Consensus 125 ~~g~--id~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~iSS~~~~~--~~~~~~ 197 (294)
T PRK07985 125 ALGG--LDIMALVAGKQVA-IPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK--GASIITTSSIQAYQ--PSPHLL 197 (294)
T ss_pred HhCC--CCEEEECCCCCcC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc--CCEEEEECCchhcc--CCCCcc
Confidence 6664 5699999997532 245778899999999999999999999999999854 48999999999987 678889
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHH
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWG 286 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~ 286 (320)
+|++||+|+++++++++.|++++||+||+|+||+|+|++.... ..+++..+......+.++...|++++..+.+
T Consensus 198 ~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~------~~~~~~~~~~~~~~~~~r~~~pedva~~~~f 271 (294)
T PRK07985 198 DYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISG------GQTQDKIPQFGQQTPMKRAGQPAELAPVYVY 271 (294)
T ss_pred hhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCcccccccc------CCCHHHHHHHhccCCCCCCCCHHHHHHHHHh
Confidence 9999999999999999999999999999999999999985320 0122222333344444566777777777777
Q ss_pred HHhh
Q 020854 287 VLSI 290 (320)
Q Consensus 287 l~~~ 290 (320)
|++-
T Consensus 272 L~s~ 275 (294)
T PRK07985 272 LASQ 275 (294)
T ss_pred hhCh
Confidence 6653
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-33 Score=248.94 Aligned_cols=191 Identities=27% Similarity=0.360 Sum_probs=164.6
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
++.||+++||||++|||++++++|+++|++|++++|+.+..++..+++.. +.++..+++|++|. +++.++.+.+.
T Consensus 15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 91 (280)
T PLN02253 15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG---EPNVCFFHCDVTVEDDVSRAVDFTVDK 91 (280)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC---CCceEEEEeecCCHHHHHHHHHHHHHH
Confidence 46699999999999999999999999999999999998877776666522 35688999999985 24555666666
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
+++ +|+||||||.......++.+.+.+++++++++|+.|+++++++++|.|.+++.|+||++||.++.. +.++...
T Consensus 92 ~g~--id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~--~~~~~~~ 167 (280)
T PLN02253 92 FGT--LDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAI--GGLGPHA 167 (280)
T ss_pred hCC--CCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcc--cCCCCcc
Confidence 664 569999999865323457788999999999999999999999999999887789999999999977 5677789
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
|++||+|+++++++++.|++++||+|++++||.++|++..
T Consensus 168 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~ 207 (280)
T PLN02253 168 YTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALAL 207 (280)
T ss_pred cHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccc
Confidence 9999999999999999999999999999999999999854
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-33 Score=246.67 Aligned_cols=211 Identities=24% Similarity=0.242 Sum_probs=169.1
Q ss_pred cCCCEEEEECCC--CcHHHHHHHHHHHcCCeEEEEeCC-----------HHHHHHHHHHHHhhcCCceEEEEEEeCCCC-
Q 020854 51 KYGSWALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRN-----------PDKLKDVSDSIQAKYAKTQIKSVVVDFSGD- 116 (320)
Q Consensus 51 ~~gk~vlITGas--~GIG~ala~~l~~~G~~Vil~~r~-----------~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~- 116 (320)
++||+++||||+ +|||+++|++|+++|++|++++|+ .++..+..+++++. +.++..+++|++|.
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~~ 81 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKN--GVKVSSMELDLTQND 81 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhc--CCeEEEEEcCCCCHH
Confidence 669999999999 599999999999999999997642 23334445555543 45788999999985
Q ss_pred -cHHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcc
Q 020854 117 -LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGA 195 (320)
Q Consensus 117 -~~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~ 195 (320)
+++.++++.+.++ ++|++|||||.... .++.+.+.+++++++++|+.+++.+++.++|.|.+++.|+||++||.+
T Consensus 82 ~i~~~~~~~~~~~g--~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~ 157 (256)
T PRK12859 82 APKELLNKVTEQLG--YPHILVNNAAYSTN--NDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQ 157 (256)
T ss_pred HHHHHHHHHHHHcC--CCcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccc
Confidence 2445555555555 46799999998654 567899999999999999999999999999999887789999999999
Q ss_pred ccccCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc--------ccCCCCCCCHHHHHHHHHH
Q 020854 196 AIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI--------KRSSFFVPSTDVYARAAMR 267 (320)
Q Consensus 196 ~~~~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~--------~~~~~~~~~~~~~a~~i~~ 267 (320)
+.. +.++...|++||+++.+|+++++.|+.++||+|++|+||+++|++... ..+.....+|+++|+.++.
T Consensus 158 ~~~--~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~ 235 (256)
T PRK12859 158 FQG--PMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEEIKQGLLPMFPFGRIGEPKDAARLIKF 235 (256)
T ss_pred cCC--CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 987 678899999999999999999999999999999999999999997432 0111223456666655555
Q ss_pred Hh
Q 020854 268 WI 269 (320)
Q Consensus 268 ~l 269 (320)
.+
T Consensus 236 l~ 237 (256)
T PRK12859 236 LA 237 (256)
T ss_pred Hh
Confidence 44
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-33 Score=252.97 Aligned_cols=226 Identities=23% Similarity=0.236 Sum_probs=179.6
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHH--HHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD--KLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
+++||++|||||++|||+++|++|+++|++|+++.++.+ ..++..+.+... +.++..+.+|++|. +++.++++.
T Consensus 52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~ 129 (300)
T PRK06128 52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE--GRKAVALPGDLKDEAFCRQLVERAV 129 (300)
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHHHHHHH
Confidence 367899999999999999999999999999999887643 445555666543 45678899999985 355666666
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCc
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
+.+++ +|+||||||.... ..++.+.+.+++++++++|+.|++++++.++|.|.. +++||++||..+.. +.++.
T Consensus 130 ~~~g~--iD~lV~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~~sS~~~~~--~~~~~ 202 (300)
T PRK06128 130 KELGG--LDILVNIAGKQTA-VKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP--GASIINTGSIQSYQ--PSPTL 202 (300)
T ss_pred HHhCC--CCEEEECCcccCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc--CCEEEEECCccccC--CCCCc
Confidence 66665 5699999997643 346788899999999999999999999999999853 58999999999987 67888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHH
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIW 285 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~ 285 (320)
..|++||+|+++|+++|+.|+.++||+|++|+||+++|++.... ...+ +..+.+....+.++...|.+...++.
T Consensus 203 ~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~-----~~~~-~~~~~~~~~~p~~r~~~p~dva~~~~ 276 (300)
T PRK06128 203 LDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSG-----GQPP-EKIPDFGSETPMKRPGQPVEMAPLYV 276 (300)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccC-----CCCH-HHHHHHhcCCCCCCCcCHHHHHHHHH
Confidence 99999999999999999999999999999999999999986421 1122 22333333444556677777777777
Q ss_pred HHHhh
Q 020854 286 GVLSI 290 (320)
Q Consensus 286 ~l~~~ 290 (320)
++++-
T Consensus 277 ~l~s~ 281 (300)
T PRK06128 277 LLASQ 281 (300)
T ss_pred HHhCc
Confidence 76553
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=250.50 Aligned_cols=227 Identities=18% Similarity=0.188 Sum_probs=178.0
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
++||+++||||++|||++++++|+++|++|++++|+.+++++..+++ +.++..+++|++|. ++..++++.+.+
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF-----GDHVLVVEGDVTSYADNQRAVDQTVDAF 78 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHHhc
Confidence 56899999999999999999999999999999999998877665544 34577889999985 345566666666
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHH----HHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCC
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVL----LKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL 204 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~----~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~ 204 (320)
++ +|+||||||.... ..++.+.+.++ |++++++|+.+++.+++.++|.|.++ +|+||++||.++.. +.++
T Consensus 79 g~--id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~--~~~~ 152 (263)
T PRK06200 79 GK--LDCFVGNAGIWDY-NTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS-GGSMIFTLSNSSFY--PGGG 152 (263)
T ss_pred CC--CCEEEECCCCccc-CCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc-CCEEEEECChhhcC--CCCC
Confidence 64 5699999998542 23455566654 88999999999999999999998754 58999999999987 6677
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCC---CCCCCHHHHHHHHHHHhCCCCcccCCchH
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSS---FFVPSTDVYARAAMRWIGYEPCCTPYWPH 281 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~---~~~~~~~~~a~~i~~~l~~~~~~~~~~~~ 281 (320)
...|++||+|+.+|+++++.|+++. |+||+|+||+++|+|....... ......++..+.+....+.++...|.+.+
T Consensus 153 ~~~Y~~sK~a~~~~~~~la~el~~~-Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva 231 (263)
T PRK06200 153 GPLYTASKHAVVGLVRQLAYELAPK-IRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHT 231 (263)
T ss_pred CchhHHHHHHHHHHHHHHHHHHhcC-cEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHHHHh
Confidence 8899999999999999999999884 9999999999999986531110 00111122234444555666888888888
Q ss_pred HHHHHHHh
Q 020854 282 SFIWGVLS 289 (320)
Q Consensus 282 ~~~~~l~~ 289 (320)
..+.|+++
T Consensus 232 ~~~~fl~s 239 (263)
T PRK06200 232 GPYVLLAS 239 (263)
T ss_pred hhhhheec
Confidence 88888765
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-33 Score=244.95 Aligned_cols=224 Identities=25% Similarity=0.295 Sum_probs=177.5
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHcC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEG 130 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~ 130 (320)
||+++||||++|||++++++|+++|++|++++|+.+++++..+++.+. +..+..+++|++|+ +++.++++.+.++.
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF--PGQVLTVQMDVRNPEDVQKMVEQIDEKFGR 78 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 689999999999999999999999999999999998888877777653 34688999999985 24455555555664
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC-CCcEEEEEcCccccccCCCCCchhhH
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSGAAIVIPSDPLYSVYA 209 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-~~g~Iv~vsS~~~~~~~~~~~~~~Y~ 209 (320)
+|++|||||.... .++.+.+.++|++++++|+.|+++++++++|.|.++ ..|+||++||..+.. +.++...|+
T Consensus 79 --id~lI~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~--~~~~~~~Y~ 152 (252)
T PRK07677 79 --IDALINNAAGNFI--CPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWD--AGPGVIHSA 152 (252)
T ss_pred --ccEEEECCCCCCC--CCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhcc--CCCCCcchH
Confidence 6699999997543 567788999999999999999999999999998764 369999999999987 567788999
Q ss_pred HHHHHHHHHHHHHHHHHcc-CCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHHH
Q 020854 210 ATKAYIDQFSRSLYVEYRK-SGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVL 288 (320)
Q Consensus 210 asKaal~~~~~~l~~el~~-~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l~ 288 (320)
+||+|+++|+++|+.|+.+ +||+|++|+||+++|+..... ....++..+.+.+..+.++...|.+...++.+++
T Consensus 153 ~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~ 227 (252)
T PRK07677 153 AAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADK-----LWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLL 227 (252)
T ss_pred HHHHHHHHHHHHHHHHhCcccCeEEEEEeeccccccccccc-----ccCCHHHHHHHhccCCCCCCCCHHHHHHHHHHHc
Confidence 9999999999999999974 699999999999996432110 1123344555555555556666666666665554
Q ss_pred h
Q 020854 289 S 289 (320)
Q Consensus 289 ~ 289 (320)
+
T Consensus 228 ~ 228 (252)
T PRK07677 228 S 228 (252)
T ss_pred C
Confidence 3
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=251.04 Aligned_cols=228 Identities=18% Similarity=0.179 Sum_probs=173.9
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||+++|||||+|||++++++|+++|++|++++|+.+++++..+. . +.++..+++|++|. +.+.++++.+.
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~----~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (262)
T TIGR03325 2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA----H-GDAVVGVEGDVRSLDDHKEAVARCVAA 76 (262)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh----c-CCceEEEEeccCCHHHHHHHHHHHHHH
Confidence 35699999999999999999999999999999999998877665432 1 34578899999974 34556666666
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCH----HHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCC
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQ----VLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP 203 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~----~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~ 203 (320)
+++ +|+||||||.... ..++.+.+. ++|++++++|+.+++.++++++|.|.++ +|+||++||..+.. +.+
T Consensus 77 ~g~--id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~~sS~~~~~--~~~ 150 (262)
T TIGR03325 77 FGK--IDCLIPNAGIWDY-STALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS-RGSVIFTISNAGFY--PNG 150 (262)
T ss_pred hCC--CCEEEECCCCCcc-CCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc-CCCEEEEeccceec--CCC
Confidence 665 5599999997532 123333333 5789999999999999999999999765 48999999999887 667
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCC--CCCCCHHHHHHHHHHHhCCCCcccCCchH
Q 020854 204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSS--FFVPSTDVYARAAMRWIGYEPCCTPYWPH 281 (320)
Q Consensus 204 ~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~--~~~~~~~~~a~~i~~~l~~~~~~~~~~~~ 281 (320)
+...|++||+|+++|+++++.|++++ |+||+|+||+++|+|....... ....+.....+...+.++.+|...|.++.
T Consensus 151 ~~~~Y~~sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva 229 (262)
T TIGR03325 151 GGPLYTAAKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYT 229 (262)
T ss_pred CCchhHHHHHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChHHhh
Confidence 78899999999999999999999887 9999999999999986531100 00001111222223345566778888888
Q ss_pred HHHHHHHh
Q 020854 282 SFIWGVLS 289 (320)
Q Consensus 282 ~~~~~l~~ 289 (320)
..+.++++
T Consensus 230 ~~~~~l~s 237 (262)
T TIGR03325 230 GAYVFFAT 237 (262)
T ss_pred hheeeeec
Confidence 87777654
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-33 Score=244.69 Aligned_cols=225 Identities=24% Similarity=0.265 Sum_probs=180.7
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
+++.+|+++||||++|||++++++|+++|++|++++|+.+..++..+++... +.++..+.+|++|. +++.++.+.+
T Consensus 7 ~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~ 84 (255)
T PRK06113 7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFALS 84 (255)
T ss_pred cCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 4567999999999999999999999999999999999998888887777653 34678889999985 2344455555
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
.++. +|++|||||...+ .++ +.+.+++++.+++|+.+++++++.++|.|.+.+.++||++||.++.. +.++..
T Consensus 85 ~~~~--~d~li~~ag~~~~--~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~~ 157 (255)
T PRK06113 85 KLGK--VDILVNNAGGGGP--KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN--KNINMT 157 (255)
T ss_pred HcCC--CCEEEECCCCCCC--CCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccC--CCCCcc
Confidence 5554 6699999998654 334 67889999999999999999999999999877788999999999987 677888
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHH
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWG 286 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~ 286 (320)
.|++||+|+++++++++.|+.+.||+|++|+||+++|++.... ..++ ..+...+..+.++...|.+....+.+
T Consensus 158 ~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~------~~~~-~~~~~~~~~~~~~~~~~~d~a~~~~~ 230 (255)
T PRK06113 158 SYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV------ITPE-IEQKMLQHTPIRRLGQPQDIANAALF 230 (255)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccc------cCHH-HHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999987631 1222 23333344444455566666666666
Q ss_pred HHh
Q 020854 287 VLS 289 (320)
Q Consensus 287 l~~ 289 (320)
+++
T Consensus 231 l~~ 233 (255)
T PRK06113 231 LCS 233 (255)
T ss_pred HcC
Confidence 554
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=273.23 Aligned_cols=241 Identities=26% Similarity=0.288 Sum_probs=195.7
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||+++|||||+|||++++++|+++|++|++++|+.+++++..+++.+. +.++..+.+|++|. +++.++++.+.
T Consensus 368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 445 (657)
T PRK07201 368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAK--GGTAHAYTCDLTDSAAVDHTVKDILAE 445 (657)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHh
Confidence 466999999999999999999999999999999999999998888888654 44688899999985 24455555566
Q ss_pred HcCCCeEEEEEccCCCCCccccccCC--CHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCc
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEV--DQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~--~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
++. +|++|||||.... ..+.+. +.+++++++++|+.|++.+++.++|.|++++.|+||++||.++.. +.++.
T Consensus 446 ~g~--id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~ 519 (657)
T PRK07201 446 HGH--VDYLVNNAGRSIR--RSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQT--NAPRF 519 (657)
T ss_pred cCC--CCEEEECCCCCCC--CChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcC--CCCCc
Confidence 664 5699999998643 223222 257899999999999999999999999988889999999999987 67888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc--cCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHH
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK--RSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSF 283 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~--~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~ 283 (320)
+.|++||+++++|+++++.|+++.||+|++|+||+++|+|.... .......+||++|+.++..+..++.........+
T Consensus 520 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~~~~~~~~~~~~~ 599 (657)
T PRK07201 520 SAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKRYNNVPTISPEEAADMVVRAIVEKPKRIDTPLGTF 599 (657)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCccccccCCCCCCHHHHHHHHHHHHHhCCcEEeccHHHH
Confidence 99999999999999999999999999999999999999997632 1223467999999999998865432222224556
Q ss_pred HHHHHhhchHHHHHH
Q 020854 284 IWGVLSILPEKLIDA 298 (320)
Q Consensus 284 ~~~l~~~~P~~~~~~ 298 (320)
..++..++|.++...
T Consensus 600 ~~~~~~~~p~~~~~~ 614 (657)
T PRK07201 600 AEVGHALAPRLARRI 614 (657)
T ss_pred HHHHHHHCHHHHHHH
Confidence 667778888654443
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=244.29 Aligned_cols=230 Identities=27% Similarity=0.261 Sum_probs=174.8
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
++++|+++||||++|||++++++|+++|++|++++|+.. .++..+++... +..+..+.+|++|. +.+.++++.+.
T Consensus 5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (260)
T PRK12823 5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAA--GGEALALTADLETYAGAQAAMAAAVEA 81 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhc--CCeEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 356999999999999999999999999999999999853 44555666443 44678899999985 24455555555
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
++ ++|+||||||.... ..++.+.+.+++++.+++|+.+++++++.++|.|.+++.|+||++||.++.. +...+
T Consensus 82 ~~--~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~----~~~~~ 154 (260)
T PRK12823 82 FG--RIDVLINNVGGTIW-AKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRG----INRVP 154 (260)
T ss_pred cC--CCeEEEECCccccC-CCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccC----CCCCc
Confidence 55 46799999996432 3567888999999999999999999999999999888889999999987753 34568
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcccc-----CCCCCCCHHHHHHHHHHHhCCCCcccCCchHH
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKR-----SSFFVPSTDVYARAAMRWIGYEPCCTPYWPHS 282 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~-----~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~ 282 (320)
|++||+|+++|+++++.|++++||+|++|+||+++|++..... ........++..+......+.++...|.+...
T Consensus 155 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 234 (260)
T PRK12823 155 YSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQVA 234 (260)
T ss_pred cHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCHHHHHH
Confidence 9999999999999999999999999999999999999742100 00000111223333333334445566777777
Q ss_pred HHHHHHh
Q 020854 283 FIWGVLS 289 (320)
Q Consensus 283 ~~~~l~~ 289 (320)
.+.++++
T Consensus 235 ~~~~l~s 241 (260)
T PRK12823 235 AILFLAS 241 (260)
T ss_pred HHHHHcC
Confidence 7666554
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=243.82 Aligned_cols=229 Identities=21% Similarity=0.250 Sum_probs=181.7
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHcC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEG 130 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~ 130 (320)
||+++||||++|||++++++|+++|++|++++|+.++.++..+++... +..+..+++|+++. +++.++++.+.+++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD--GGKAIAVKADVSDRDQVFAAVRQVVDTFGD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 789999999999999999999999999999999998888888777654 34678899999986 24555666666654
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccccCCCCCchhhH
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYA 209 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~ 209 (320)
+|++|||||.... .++.+.+.+++++++++|+.+++.+++.+++.|.+.+ .++||++||..+.. +.++...|+
T Consensus 80 --id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~Y~ 153 (256)
T PRK08643 80 --LNVVVNNAGVAPT--TPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVV--GNPELAVYS 153 (256)
T ss_pred --CCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECcccccc--CCCCCchhH
Confidence 5699999998653 5677889999999999999999999999999997764 58999999999887 677889999
Q ss_pred HHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCC--CCCCCHHH-HHHHHHHHhCCCCcccCCchHHHHHH
Q 020854 210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSS--FFVPSTDV-YARAAMRWIGYEPCCTPYWPHSFIWG 286 (320)
Q Consensus 210 asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~--~~~~~~~~-~a~~i~~~l~~~~~~~~~~~~~~~~~ 286 (320)
+||++++.++++++.|+.++||+|++|+||+++|++....... .....+++ ..+.....+..++...|+++...+.+
T Consensus 154 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ 233 (256)
T PRK08643 154 STKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSF 233 (256)
T ss_pred HHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHHHHHHHHHH
Confidence 9999999999999999999999999999999999987531110 00011111 12333444455566666667766666
Q ss_pred HHh
Q 020854 287 VLS 289 (320)
Q Consensus 287 l~~ 289 (320)
+++
T Consensus 234 L~~ 236 (256)
T PRK08643 234 LAG 236 (256)
T ss_pred HhC
Confidence 654
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=244.19 Aligned_cols=226 Identities=21% Similarity=0.265 Sum_probs=177.7
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCC-HHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-PDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
+++||+++||||++|||+++|++|+++|++|++++|+ .+..+...+++... +.++..+.+|++|. +.+.++.+.+
T Consensus 4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~ 81 (261)
T PRK08936 4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA--GGEAIAVKGDVTVESDVVNLIQTAVK 81 (261)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHHH
Confidence 3669999999999999999999999999999998885 45566667777554 45678899999985 2344455555
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccccCCCCCc
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
.++ ++|++|||||...+ .++.+.+.+++++++++|+.+++.+++.++|.|.+++ .|+||++||..+.. +.++.
T Consensus 82 ~~g--~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~--~~~~~ 155 (261)
T PRK08936 82 EFG--TLDVMINNAGIENA--VPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQI--PWPLF 155 (261)
T ss_pred HcC--CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccC--CCCCC
Confidence 555 46699999998654 5677889999999999999999999999999998765 68999999998877 67888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHH
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIW 285 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~ 285 (320)
..|++||+|+.+++++++.|+.++||+|++|+||+++|++..... ..++. ...+....+.++...+++....+.
T Consensus 156 ~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~va~~~~ 229 (261)
T PRK08936 156 VHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKF-----ADPKQ-RADVESMIPMGYIGKPEEIAAVAA 229 (261)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCcccccc-----CCHHH-HHHHHhcCCCCCCcCHHHHHHHHH
Confidence 999999999999999999999999999999999999999865311 12222 223333344445555556665555
Q ss_pred HHHh
Q 020854 286 GVLS 289 (320)
Q Consensus 286 ~l~~ 289 (320)
++++
T Consensus 230 ~l~s 233 (261)
T PRK08936 230 WLAS 233 (261)
T ss_pred HHcC
Confidence 5543
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=246.61 Aligned_cols=215 Identities=21% Similarity=0.299 Sum_probs=178.3
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHH-------HHHHHHHHHhhcCCceEEEEEEeCCCC--cHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK-------LKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEG 120 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~ 120 (320)
.++||+++||||++|||.++|++|+++|++|++++|+.+. +++..+++... +.++..+.+|+++. +.+.
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~ 80 (273)
T PRK08278 3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA--GGQALPLVGDVRDEDQVAAA 80 (273)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHH
Confidence 3568999999999999999999999999999999998643 44555566543 44688899999985 2445
Q ss_pred HHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC
Q 020854 121 VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP 200 (320)
Q Consensus 121 ~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~ 200 (320)
++++.+.+++ +|+||||||.... .++.+.+.+++++++++|+.|++.++++++|.|.++++|+|+++||..+..
T Consensus 81 ~~~~~~~~g~--id~li~~ag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-- 154 (273)
T PRK08278 81 VAKAVERFGG--IDICVNNASAINL--TGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLD-- 154 (273)
T ss_pred HHHHHHHhCC--CCEEEECCCCcCC--CCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcc--
Confidence 5566666664 6699999998654 567788999999999999999999999999999988889999999988776
Q ss_pred CC--CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEecc-ceecCCCcc----ccCCCCCCCHHHHHHHHHHHhCCC
Q 020854 201 SD--PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPL-YVATKMASI----KRSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 201 ~~--~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG-~v~T~~~~~----~~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
+. ++.+.|++||+|+++++++++.|+.++||+|++|+|| +++|++... ..+.....+|+++|+.++..+..+
T Consensus 155 ~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~~~~~~~~~~~p~~va~~~~~l~~~~ 233 (273)
T PRK08278 155 PKWFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLGGDEAMRRSRTPEIMADAAYEILSRP 233 (273)
T ss_pred ccccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhcccccccccccCCHHHHHHHHHHHhcCc
Confidence 44 7788999999999999999999999999999999999 689986442 112224679999999999988654
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=244.43 Aligned_cols=187 Identities=32% Similarity=0.439 Sum_probs=155.9
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
+.+.||+++||||++|||+++|++|+++|++|++++++.++. .+++... .+..+++|++|. +++.++++.+
T Consensus 3 ~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~~----~~~~~~~Dl~~~~~~~~~~~~~~~ 75 (255)
T PRK06463 3 MRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELREK----GVFTIKCDVGNRDQVKKSKEVVEK 75 (255)
T ss_pred CCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHhC----CCeEEEecCCCHHHHHHHHHHHHH
Confidence 345699999999999999999999999999999887765432 2233221 367889999985 2445555555
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
.+++ +|+||||||.... .++.+.+.+++++++++|+.|++++++.++|.|.+++.|+||++||.++... +.++.+
T Consensus 76 ~~~~--id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~-~~~~~~ 150 (255)
T PRK06463 76 EFGR--VDVLVNNAGIMYL--MPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGT-AAEGTT 150 (255)
T ss_pred HcCC--CCEEEECCCcCCC--CChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCC-CCCCcc
Confidence 5664 5699999998653 5677889999999999999999999999999998778899999999988742 346678
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
.|++||+|+++|+++++.|+++.||+|++|+||+++|++..
T Consensus 151 ~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~ 191 (255)
T PRK06463 151 FYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTL 191 (255)
T ss_pred HhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhh
Confidence 89999999999999999999999999999999999999864
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-33 Score=270.02 Aligned_cols=222 Identities=25% Similarity=0.314 Sum_probs=175.9
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
..||+++||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++..+.+|++|. +++.++++.+.+
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 341 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL-----GDEHLSVQADITDEAAVESAFAQIQARW 341 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEccCCCHHHHHHHHHHHHHHc
Confidence 57899999999999999999999999999999999998887776554 34567789999985 345566666666
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
+. +|+||||||.... ..++.+.+.++|++++++|+.|++++++.++|+| ++.|+||++||.++.. +.++...|
T Consensus 342 g~--id~li~nAg~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~g~iv~isS~~~~~--~~~~~~~Y 414 (520)
T PRK06484 342 GR--LDVLVNNAGIAEV-FKPSLEQSAEDFTRVYDVNLSGAFACARAAARLM--SQGGVIVNLGSIASLL--ALPPRNAY 414 (520)
T ss_pred CC--CCEEEECCCCcCC-CCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHh--ccCCEEEEECchhhcC--CCCCCchh
Confidence 64 5699999998642 2467788999999999999999999999999999 4569999999999988 67889999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHHH
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVL 288 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l~ 288 (320)
++||+++++|+++|+.|++++||+||+|+||+|+|+|...... ..++..+.+.+..+.++...|.+....+.+++
T Consensus 415 ~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~ 489 (520)
T PRK06484 415 CASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKA-----SGRADFDSIRRRIPLGRLGDPEEVAEAIAFLA 489 (520)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhcc-----ccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999998653110 01111222333333344455555555555544
Q ss_pred h
Q 020854 289 S 289 (320)
Q Consensus 289 ~ 289 (320)
+
T Consensus 490 s 490 (520)
T PRK06484 490 S 490 (520)
T ss_pred C
Confidence 3
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=244.29 Aligned_cols=226 Identities=24% Similarity=0.288 Sum_probs=178.7
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
.+++||+++||||++|||++++++|+++|++|++++|+.++. . ...+..+++|++|. +++.++++.+
T Consensus 5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~------~-----~~~~~~~~~D~~~~~~~~~~~~~~~~ 73 (260)
T PRK06523 5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD------L-----PEGVEFVAADLTTAEGCAAVARAVLE 73 (260)
T ss_pred cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh------c-----CCceeEEecCCCCHHHHHHHHHHHHH
Confidence 346799999999999999999999999999999999986531 1 33577899999985 2444555556
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCC-Cc
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP-LY 205 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~-~~ 205 (320)
.++. +|+||||||.......++.+.+.+++++++++|+.|++.+++.++|+|.+++.|+||++||..+.. +.+ +.
T Consensus 74 ~~~~--id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~--~~~~~~ 149 (260)
T PRK06523 74 RLGG--VDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRL--PLPEST 149 (260)
T ss_pred HcCC--CCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccC--CCCCCc
Confidence 5564 569999999754323457778999999999999999999999999999888789999999999877 433 68
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccC---CCCCCCHHHHHHHHHHH---hCCCCcccCCc
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRS---SFFVPSTDVYARAAMRW---IGYEPCCTPYW 279 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~---~~~~~~~~~~a~~i~~~---l~~~~~~~~~~ 279 (320)
..|++||+++++++++++.|++++||+|++|+||+++|++...... .....++++..+.+... ++.++...|.+
T Consensus 150 ~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 229 (260)
T PRK06523 150 TAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEE 229 (260)
T ss_pred chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHHH
Confidence 8999999999999999999999999999999999999998642110 11123445555555443 34456677788
Q ss_pred hHHHHHHHHh
Q 020854 280 PHSFIWGVLS 289 (320)
Q Consensus 280 ~~~~~~~l~~ 289 (320)
+..++.++++
T Consensus 230 va~~~~~l~s 239 (260)
T PRK06523 230 VAELIAFLAS 239 (260)
T ss_pred HHHHHHHHhC
Confidence 8887777765
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-35 Score=233.31 Aligned_cols=209 Identities=30% Similarity=0.352 Sum_probs=174.1
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
++.|+++++||+.-|||+++++.|++.|++|+.++|+++.+..+.++. ...+..+..|+++. +.+.+.+.
T Consensus 4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~-----p~~I~Pi~~Dls~w-----ea~~~~l~ 73 (245)
T KOG1207|consen 4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET-----PSLIIPIVGDLSAW-----EALFKLLV 73 (245)
T ss_pred cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC-----CcceeeeEecccHH-----HHHHHhhc
Confidence 467999999999999999999999999999999999999999888765 34588999999864 33444443
Q ss_pred CC-CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC-CCcEEEEEcCccccccCCCCCchh
Q 020854 130 GL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 130 ~~-~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
.. .+|.+|||||+... .+|.+.+.+.+++.|++|+.+++.++|....-+..+ .+|.|||+||.++.+ +..+...
T Consensus 74 ~v~pidgLVNNAgvA~~--~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R--~~~nHtv 149 (245)
T KOG1207|consen 74 PVFPIDGLVNNAGVATN--HPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIR--PLDNHTV 149 (245)
T ss_pred ccCchhhhhccchhhhc--chHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhccc--ccCCceE
Confidence 32 57799999999775 779999999999999999999999999966655443 478999999999999 7889999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCC
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPY 278 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~ 278 (320)
||++|+|+++++++|+.|+.+++||||.|.|-.|-|.|.+. .|.+|++ ++.+++.++.+|.....
T Consensus 150 YcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~d-----nWSDP~K-~k~mL~riPl~rFaEV~ 214 (245)
T KOG1207|consen 150 YCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRD-----NWSDPDK-KKKMLDRIPLKRFAEVD 214 (245)
T ss_pred EeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEeccccc-----ccCCchh-ccchhhhCchhhhhHHH
Confidence 99999999999999999999999999999999999999774 2334443 45556666655544333
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-33 Score=252.50 Aligned_cols=192 Identities=22% Similarity=0.229 Sum_probs=161.2
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||+++||||++|||+++|++|+++|++|++++|+.++.++..+++.+..++..+.++.+|++|. +++.++++.+.
T Consensus 11 ~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~ 90 (313)
T PRK05854 11 DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAE 90 (313)
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 4779999999999999999999999999999999999999999888887766666789999999985 24444555554
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC-------
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP------- 200 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~------- 200 (320)
++ ++|+||||||.... +..+.+.++++.++++|+.|++.+++.++|.|.+. .++||++||.++....
T Consensus 91 ~~--~iD~li~nAG~~~~---~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~~~~~~ 164 (313)
T PRK05854 91 GR--PIHLLINNAGVMTP---PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAINWDDLN 164 (313)
T ss_pred CC--CccEEEECCccccC---CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcCccccc
Confidence 44 46699999998653 23466788999999999999999999999999754 6899999999875521
Q ss_pred ---CCCCchhhHHHHHHHHHHHHHHHHHH--ccCCceEEEEeccceecCCCc
Q 020854 201 ---SDPLYSVYAATKAYIDQFSRSLYVEY--RKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 201 ---~~~~~~~Y~asKaal~~~~~~l~~el--~~~gi~v~~v~PG~v~T~~~~ 247 (320)
+.++...|+.||+|+..|++.|+.++ ...||+|++++||+++|++..
T Consensus 165 ~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~ 216 (313)
T PRK05854 165 WERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLA 216 (313)
T ss_pred ccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccc
Confidence 12456789999999999999999864 467899999999999999864
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-33 Score=245.94 Aligned_cols=216 Identities=29% Similarity=0.393 Sum_probs=187.1
Q ss_pred CCC--CcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH-cCCCeE
Q 020854 60 GPT--DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI-EGLDVG 134 (320)
Q Consensus 60 Gas--~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~-~~~~id 134 (320)
|++ +|||+++|++|+++|++|++++|+.+++++..+++.+..+ .. .+++|++++ ++..++++.+.+ ++ +|
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~-~~--~~~~D~~~~~~v~~~~~~~~~~~~g~--iD 75 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG-AE--VIQCDLSDEESVEALFDEAVERFGGR--ID 75 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT-SE--EEESCTTSHHHHHHHHHHHHHHHCSS--ES
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC-Cc--eEeecCcchHHHHHHHHHHHhhcCCC--eE
Confidence 566 9999999999999999999999999998888888877664 33 499999974 466777778888 64 66
Q ss_pred EEEEccCCCCC--ccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHHHH
Q 020854 135 VLINNVGISYP--YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATK 212 (320)
Q Consensus 135 ~lI~nAG~~~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asK 212 (320)
+||||+|.... ...++.+.+.++|++.+++|+.+++.+++.+.|+|.++ |+||++||.++.. +.+++..|+++|
T Consensus 76 ~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gsii~iss~~~~~--~~~~~~~y~~sK 151 (241)
T PF13561_consen 76 ILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG--GSIINISSIAAQR--PMPGYSAYSASK 151 (241)
T ss_dssp EEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE--EEEEEEEEGGGTS--BSTTTHHHHHHH
T ss_pred EEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCcccccchhhcc--cCccchhhHHHH
Confidence 99999998764 23677889999999999999999999999999988654 9999999999988 678889999999
Q ss_pred HHHHHHHHHHHHHHcc-CCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHHHhh
Q 020854 213 AYIDQFSRSLYVEYRK-SGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVLSI 290 (320)
Q Consensus 213 aal~~~~~~l~~el~~-~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l~~~ 290 (320)
+|+++|+++|+.||++ +|||||+|+||+++|++.... ...++..+......+.+|...|.+++.++.||++-
T Consensus 152 aal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~------~~~~~~~~~~~~~~pl~r~~~~~evA~~v~fL~s~ 224 (241)
T PF13561_consen 152 AALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERI------PGNEEFLEELKKRIPLGRLGTPEEVANAVLFLASD 224 (241)
T ss_dssp HHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHH------HTHHHHHHHHHHHSTTSSHBEHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHhccccCeeeeeecccceeccchhcc------ccccchhhhhhhhhccCCCcCHHHHHHHHHHHhCc
Confidence 9999999999999999 999999999999999986531 23577888888899999989999999999998863
|
... |
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-32 Score=241.22 Aligned_cols=191 Identities=26% Similarity=0.383 Sum_probs=168.1
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
+++.||+++||||++|||++++++|+++|++|++++|+.+++++..+++++. +.++..+.+|++|. +.+.++++.+
T Consensus 7 ~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~ 84 (256)
T PRK06124 7 FSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAA--GGAAEALAFDIADEEAVAAAFARIDA 84 (256)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHH
Confidence 4467999999999999999999999999999999999998888888877654 34588899999985 2445556656
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
.+++ +|++|||+|.... .++.+.+.+++++.+++|+.+++.+++.++|.|.+++.++||++||..+.. +.++..
T Consensus 85 ~~~~--id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~--~~~~~~ 158 (256)
T PRK06124 85 EHGR--LDILVNNVGARDR--RPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQV--ARAGDA 158 (256)
T ss_pred hcCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhcc--CCCCcc
Confidence 5664 5699999998654 567888999999999999999999999999999888889999999999987 678889
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
.|++||+++.+++++++.|+.+.||+|++|+||+++|++..
T Consensus 159 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~ 199 (256)
T PRK06124 159 VYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNA 199 (256)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchh
Confidence 99999999999999999999999999999999999999854
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=243.77 Aligned_cols=232 Identities=30% Similarity=0.391 Sum_probs=183.2
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
+.+|+++||||++|||++++++|+++|++|++++|+.+ ..+..+++... +.++..+.+|+++. +++.++.+.+.+
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 80 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGR--GHRCTAVVADVRDPASVAAAIKRAKEKE 80 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999999999999999875 34444555433 45678899999985 344555666666
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
+. +|++|||||.... .++.+.+.+++++++++|+.+++.+++.++|.+.+++.++||++||..+... +.++...|
T Consensus 81 ~~--id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-~~~~~~~Y 155 (263)
T PRK08226 81 GR--IDILVNNAGVCRL--GSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMV-ADPGETAY 155 (263)
T ss_pred CC--CCEEEECCCcCCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccc-CCCCcchH
Confidence 54 6699999998653 5677888999999999999999999999999998777899999999887432 45778899
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHHH
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVL 288 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l~ 288 (320)
+++|+++++++++++.|+.++||+|++|+||+++|+|............++++.+.+....+.++...|.+....+.+++
T Consensus 156 ~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~ 235 (263)
T PRK08226 156 ALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLA 235 (263)
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999987542111111234455555555555556677777777777766
Q ss_pred hh
Q 020854 289 SI 290 (320)
Q Consensus 289 ~~ 290 (320)
+-
T Consensus 236 ~~ 237 (263)
T PRK08226 236 SD 237 (263)
T ss_pred Cc
Confidence 54
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-32 Score=236.68 Aligned_cols=216 Identities=18% Similarity=0.236 Sum_probs=178.6
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCc----HHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDL----DEGVERIKE 126 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~----~~~~~~~~~ 126 (320)
++||+++||||++|||++++++|+++|++|++++|+.+++++..+++.+.. +..+..+.+|+++.. .+.++++.+
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~i~~ 82 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAG-HPEPFAIRFDLMSAEEKEFEQFAATIAE 82 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcC-CCCcceEEeeecccchHHHHHHHHHHHH
Confidence 568999999999999999999999999999999999998888888876543 345677889987532 344455555
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
.++. ++|++|||||.... ..++.+.+.+++++++++|+.|++.+++.++|.|.+.+.++||++||..+.. +.++..
T Consensus 83 ~~~~-~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~--~~~~~~ 158 (239)
T PRK08703 83 ATQG-KLDGIVHCAGYFYA-LSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGET--PKAYWG 158 (239)
T ss_pred HhCC-CCCEEEEecccccc-CCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEecccccc--CCCCcc
Confidence 5522 56799999997543 2467888999999999999999999999999999887789999999999887 667788
Q ss_pred hhHHHHHHHHHHHHHHHHHHccC-CceEEEEeccceecCCCccc---cCCCCCCCHHHHHHHHHHHhCC
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKS-GIDVQCQVPLYVATKMASIK---RSSFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~-gi~v~~v~PG~v~T~~~~~~---~~~~~~~~~~~~a~~i~~~l~~ 271 (320)
.|++||++++.|+++++.|+.+. +|+|++|.||+++|++.... .....+.++++++..++..+..
T Consensus 159 ~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (239)
T PRK08703 159 GFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEAKSERKSYGDVLPAFVWWASA 227 (239)
T ss_pred chHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCCCCCccccCCHHHHHHHHHHHhCc
Confidence 99999999999999999999876 69999999999999986531 1112356888888888888763
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-32 Score=240.70 Aligned_cols=229 Identities=24% Similarity=0.257 Sum_probs=184.2
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
+.+|+++||||++|||+++|++|+++|++|++++|+.++.++..+++ +..+..+.+|++|. ++..++++.+.+
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI-----GPAAIAVSLDVTRQDSIDRIVAAAVERF 78 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 56899999999999999999999999999999999998887766655 23578889999985 244555555555
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccccCCCCCchh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
+. +|++|||||.... .++.+.+.+++++++++|+.+++.+++.+++.|.+++ +|+||++||..+.. +.++.+.
T Consensus 79 ~~--id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~ 152 (257)
T PRK07067 79 GG--IDILFNNAALFDM--APILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRR--GEALVSH 152 (257)
T ss_pred CC--CCEEEECCCcCCC--CCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCC--CCCCCch
Confidence 54 6699999998653 5677889999999999999999999999999987654 58999999998877 6778899
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcccc---CCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHH
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKR---SSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFI 284 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~---~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~ 284 (320)
|++||+++.+++++++.|+.++||+|++|.||+++|++..... .......+.+..+.+...++.++...|.++..++
T Consensus 153 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 232 (257)
T PRK07067 153 YCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMA 232 (257)
T ss_pred hhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHH
Confidence 9999999999999999999999999999999999999865311 1111122334444455555666777888888877
Q ss_pred HHHHhh
Q 020854 285 WGVLSI 290 (320)
Q Consensus 285 ~~l~~~ 290 (320)
.++++-
T Consensus 233 ~~l~s~ 238 (257)
T PRK07067 233 LFLASA 238 (257)
T ss_pred HHHhCc
Confidence 777654
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-32 Score=239.76 Aligned_cols=189 Identities=27% Similarity=0.381 Sum_probs=161.0
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
+++++||+++||||++|||.++|++|+++|++|++++|+.+.. +..+++. +..+..+++|+++. +++.++++.
T Consensus 10 ~~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (255)
T PRK06841 10 AFDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQLL----GGNAKGLVCDVSDSQSVEAAVAAVI 84 (255)
T ss_pred hcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHhh----CCceEEEEecCCCHHHHHHHHHHHH
Confidence 3567899999999999999999999999999999999987642 2333332 34567899999975 244555555
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCc
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
+.++. +|++|||||.... .++.+.+.+++++++++|+.|++++++.+.|.|.+++.++||++||..+.. +.+..
T Consensus 85 ~~~~~--~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~ 158 (255)
T PRK06841 85 SAFGR--IDILVNSAGVALL--APAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVV--ALERH 158 (255)
T ss_pred HHhCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhcc--CCCCC
Confidence 55554 6699999998653 567788899999999999999999999999999888889999999999887 67888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
..|++||+|+++++++++.|++++||+|++|+||+++|++..
T Consensus 159 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~ 200 (255)
T PRK06841 159 VAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGK 200 (255)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccc
Confidence 999999999999999999999999999999999999999865
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-32 Score=238.98 Aligned_cols=188 Identities=24% Similarity=0.352 Sum_probs=161.8
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeC-CHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
.+|+++||||++|||++++++|+++|++|+++++ +.+..++..++++.. +..+..+.+|++|. ++..++++.+.+
T Consensus 1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (256)
T PRK12743 1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH--GVRAEIRQLDLSDLPEGAQALDKLIQRL 78 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3689999999999999999999999999998864 666677777777654 45688899999985 345566666666
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccccCCCCCchh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
++ +|++|||||.... .++.+.+.+++++++++|+.+++.+++++.++|.+++ +|+||++||..+.. +.++...
T Consensus 79 ~~--id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~--~~~~~~~ 152 (256)
T PRK12743 79 GR--IDVLVNNAGAMTK--APFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHT--PLPGASA 152 (256)
T ss_pred CC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccC--CCCCcch
Confidence 65 5699999998654 4567889999999999999999999999999997654 58999999999887 6778899
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
|+++|+++.+++++++.++.++||+|++|+||+++|++..
T Consensus 153 Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~ 192 (256)
T PRK12743 153 YTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNG 192 (256)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcccc
Confidence 9999999999999999999999999999999999999865
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-32 Score=238.51 Aligned_cols=189 Identities=24% Similarity=0.343 Sum_probs=160.3
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
++.++||+++||||++|||+++|++|+++|++|++++|+.++.++..+++ +..+.++++|++|. +.+.++++.
T Consensus 5 ~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~ 79 (255)
T PRK05717 5 NPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL-----GENAWFIAMDVADEAQVAAGVAEVL 79 (255)
T ss_pred CcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc-----CCceEEEEccCCCHHHHHHHHHHHH
Confidence 45677999999999999999999999999999999999987766654433 34578899999985 234456666
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCc
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
+.++. +|++|||||...+...++.+.+.+++++++++|+.+++.+++++.|+|.++ .|+||++||..+.. +.++.
T Consensus 80 ~~~g~--id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~ii~~sS~~~~~--~~~~~ 154 (255)
T PRK05717 80 GQFGR--LDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH-NGAIVNLASTRARQ--SEPDT 154 (255)
T ss_pred HHhCC--CCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CcEEEEEcchhhcC--CCCCC
Confidence 66664 669999999875433567788999999999999999999999999998754 58999999999987 66788
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
..|++||+|+++++++++.|+.+ +|+|++|+||+++|++..
T Consensus 155 ~~Y~~sKaa~~~~~~~la~~~~~-~i~v~~i~Pg~i~t~~~~ 195 (255)
T PRK05717 155 EAYAASKGGLLALTHALAISLGP-EIRVNAVSPGWIDARDPS 195 (255)
T ss_pred cchHHHHHHHHHHHHHHHHHhcC-CCEEEEEecccCcCCccc
Confidence 99999999999999999999976 499999999999998754
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-31 Score=238.46 Aligned_cols=232 Identities=19% Similarity=0.187 Sum_probs=189.0
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHcC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEG 130 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~ 130 (320)
+|+++||||++|||.+++++|+++|++|++++|+.+++++..+++....+..++..+.+|+++. +...++++.+.++.
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 6899999999999999999999999999999999988888877776654335688999999975 24455555555554
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccccCCCCCchhhH
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYA 209 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~ 209 (320)
+|++|||||.... .++.+.+.+++++++++|+.|++.+++.++|.|.+++ .++||++||.++.. +.+....|+
T Consensus 82 --id~vv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~--~~~~~~~Y~ 155 (259)
T PRK12384 82 --VDLLVYNAGIAKA--AFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKV--GSKHNSGYS 155 (259)
T ss_pred --CCEEEECCCcCCC--CCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCccccc--CCCCCchhH
Confidence 5699999998764 5678889999999999999999999999999998776 68999999998877 567788999
Q ss_pred HHHHHHHHHHHHHHHHHccCCceEEEEeccc-eecCCCccccCC---CCCCCHHHHHHHHHHHhCCCCcccCCchHHHHH
Q 020854 210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVPLY-VATKMASIKRSS---FFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIW 285 (320)
Q Consensus 210 asKaal~~~~~~l~~el~~~gi~v~~v~PG~-v~T~~~~~~~~~---~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~ 285 (320)
+||+|+++++++++.|+++.||+|++|+||. +.|+++....+. ....++++..+...+..+.++...+.+....+.
T Consensus 156 ~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~ 235 (259)
T PRK12384 156 AAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLL 235 (259)
T ss_pred HHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHH
Confidence 9999999999999999999999999999996 577776421111 011345666666666667677778888888777
Q ss_pred HHHhh
Q 020854 286 GVLSI 290 (320)
Q Consensus 286 ~l~~~ 290 (320)
++++.
T Consensus 236 ~l~~~ 240 (259)
T PRK12384 236 FYASP 240 (259)
T ss_pred HHcCc
Confidence 76553
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-32 Score=242.07 Aligned_cols=216 Identities=19% Similarity=0.190 Sum_probs=165.5
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC-C
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG-L 131 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 131 (320)
+|+++|||| +|||+++|++|+ +|++|++++|+.+++++..+++... +.++..+++|++|. +.++++.+.+.. .
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~--~~i~~~~~~~~~~g 75 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREA--GFDVSTQEVDVSSR--ESVKALAATAQTLG 75 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEeecCCH--HHHHHHHHHHHhcC
Confidence 689999998 699999999996 8999999999998888877777653 45688899999986 444444333321 1
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCC----------
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS---------- 201 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~---------- 201 (320)
++|+||||||... +.+++++++++|+.|++++++.+.|.|.+ +|++|++||.++...+.
T Consensus 76 ~id~li~nAG~~~---------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~~~~~~ 144 (275)
T PRK06940 76 PVTGLVHTAGVSP---------SQASPEAILKVDLYGTALVLEEFGKVIAP--GGAGVVIASQSGHRLPALTAEQERALA 144 (275)
T ss_pred CCCEEEECCCcCC---------chhhHHHHHHHhhHHHHHHHHHHHHHHhh--CCCEEEEEecccccCcccchhhhcccc
Confidence 4779999999742 13568999999999999999999999964 47889999998876310
Q ss_pred --------------C----CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHH
Q 020854 202 --------------D----PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYAR 263 (320)
Q Consensus 202 --------------~----~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~ 263 (320)
. ++...|++||+|+.+++++++.|++++||+||+|+||+++|+|...... ..+++..+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~----~~~~~~~~ 220 (275)
T PRK06940 145 TTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELN----GPRGDGYR 220 (275)
T ss_pred ccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhc----CCchHHHH
Confidence 0 2467899999999999999999999999999999999999998643111 11122223
Q ss_pred HHHHHhCCCCcccCCchHHHHHHHHh
Q 020854 264 AAMRWIGYEPCCTPYWPHSFIWGVLS 289 (320)
Q Consensus 264 ~i~~~l~~~~~~~~~~~~~~~~~l~~ 289 (320)
.+....+.++...|++++..+.|+++
T Consensus 221 ~~~~~~p~~r~~~peeia~~~~fL~s 246 (275)
T PRK06940 221 NMFAKSPAGRPGTPDEIAALAEFLMG 246 (275)
T ss_pred HHhhhCCcccCCCHHHHHHHHHHHcC
Confidence 34444555677777788877777765
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-32 Score=238.30 Aligned_cols=182 Identities=29% Similarity=0.324 Sum_probs=156.2
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++++||+++||||++|||++++++|+++|++|++++|+.++ + . .+..+..+++|++|. +++.++.+.+
T Consensus 2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~-----~---~--~~~~~~~~~~D~~~~~~~~~~~~~~~~ 71 (252)
T PRK07856 2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-----T---V--DGRPAEFHAADVRDPDQVAALVDAIVE 71 (252)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh-----h---h--cCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 34679999999999999999999999999999999998764 0 1 144678899999975 3455556666
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC-CCcEEEEEcCccccccCCCCCc
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-~~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
.+++ +|+||||||.... .++.+.+.+.+++++++|+.+++.+++.+.|.|.++ +.|+||++||..+.. +.++.
T Consensus 72 ~~~~--id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~--~~~~~ 145 (252)
T PRK07856 72 RHGR--LDVLVNNAGGSPY--ALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRR--PSPGT 145 (252)
T ss_pred HcCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCC--CCCCC
Confidence 5664 5699999997653 557788999999999999999999999999999865 458999999999987 67889
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
..|++||+++++|+++++.|+.++ |+|++|+||+++|++..
T Consensus 146 ~~Y~~sK~a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~ 186 (252)
T PRK07856 146 AAYGAAKAGLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSE 186 (252)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCC-eEEEEEEeccccChHHh
Confidence 999999999999999999999887 99999999999999864
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-31 Score=243.58 Aligned_cols=213 Identities=24% Similarity=0.251 Sum_probs=174.2
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCC-HHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-PDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERI 124 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~ 124 (320)
..+++||+++||||++|||+++|++|+++|++|++.+++ .+..++..+++++. +.++..+.+|++|. +++.++.+
T Consensus 7 ~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~--g~~~~~~~~Dv~d~~~~~~~~~~~ 84 (306)
T PRK07792 7 TTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAA--GAKAVAVAGDISQRATADELVATA 84 (306)
T ss_pred CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHHH
Confidence 456789999999999999999999999999999999985 45667777777654 45688899999985 24444555
Q ss_pred HHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC-------CCcEEEEEcCcccc
Q 020854 125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-------KKGAIVNIGSGAAI 197 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-------~~g~Iv~vsS~~~~ 197 (320)
.+ +++ +|+||||||...+ ..+.+.+.+++++++++|+.|++++++.+.|+|.++ ..|+||++||.++.
T Consensus 85 ~~-~g~--iD~li~nAG~~~~--~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 159 (306)
T PRK07792 85 VG-LGG--LDIVVNNAGITRD--RMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGL 159 (306)
T ss_pred HH-hCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccc
Confidence 55 554 6699999998764 567788999999999999999999999999998753 14799999999998
Q ss_pred ccCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccC--------CCCCCCHHHHHHHHHHHh
Q 020854 198 VIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRS--------SFFVPSTDVYARAAMRWI 269 (320)
Q Consensus 198 ~~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~--------~~~~~~~~~~a~~i~~~l 269 (320)
. +.++.+.|++||+|+++|+++++.|+.++||+||+|+||. .|+|...... .....+|+++|..+...+
T Consensus 160 ~--~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~~~~~~~~~~~~~~~~~pe~va~~v~~L~ 236 (306)
T PRK07792 160 V--GPVGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADVFGDAPDVEAGGIDPLSPEHVVPLVQFLA 236 (306)
T ss_pred c--CCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhhccccchhhhhccCCCCHHHHHHHHHHHc
Confidence 7 6678889999999999999999999999999999999994 8888642111 112357999999877654
Q ss_pred C
Q 020854 270 G 270 (320)
Q Consensus 270 ~ 270 (320)
.
T Consensus 237 s 237 (306)
T PRK07792 237 S 237 (306)
T ss_pred C
Confidence 3
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-32 Score=262.34 Aligned_cols=211 Identities=28% Similarity=0.419 Sum_probs=174.9
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
.+||+++||||++|||+++|++|+++|++|++++|+.+++++..+++ +..+..+++|++|. +++.++.+.+.+
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL-----GPDHHALAMDVSDEAQIREGFEQLHREF 77 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEeccCCHHHHHHHHHHHHHHh
Confidence 46899999999999999999999999999999999998887766655 34577899999985 245556666666
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCc-EEEEEcCccccccCCCCCchh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKG-AIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g-~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
+. +|+||||||...+...++.+.+.+++++++++|+.+++.++++++|+|.+++.| +||++||.++.. +.++...
T Consensus 78 g~--iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~--~~~~~~~ 153 (520)
T PRK06484 78 GR--IDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLV--ALPKRTA 153 (520)
T ss_pred CC--CCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCC--CCCCCch
Confidence 64 569999999854323567788999999999999999999999999999876665 999999999988 6788999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc--------------cCCCCCCCHHHHHHHHHHHhC
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK--------------RSSFFVPSTDVYARAAMRWIG 270 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~--------------~~~~~~~~~~~~a~~i~~~l~ 270 (320)
|+++|+|+.+|+++|+.|+.++||+|++|+||+++|++.... .+.....+|+++|+.+...+.
T Consensus 154 Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~v~~l~~ 230 (520)
T PRK06484 154 YSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLAS 230 (520)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999986421 011123467777777666544
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-31 Score=238.78 Aligned_cols=215 Identities=23% Similarity=0.307 Sum_probs=178.2
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
+++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++... +.++..+.+|++|. +++.++.+.+.+
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 81 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ--GAEVLGVRTDVSDAAQVEALADAALERF 81 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 45899999999999999999999999999999999998888887777653 45688899999985 244455555555
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCC------cEEEEEcCccccccCCC
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKK------GAIVNIGSGAAIVIPSD 202 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~------g~Iv~vsS~~~~~~~~~ 202 (320)
+. +|+||||||.... .++.+.+.++++.++++|+.|++++++.++|.|.++.. |+||++||.++.. +.
T Consensus 82 g~--id~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~ 155 (287)
T PRK06194 82 GA--VHLLFNNAGVGAG--GLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLL--AP 155 (287)
T ss_pred CC--CCEEEECCCCCCC--CCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc--CC
Confidence 54 5699999998764 56778899999999999999999999999999987654 7999999999987 66
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHc--cCCceEEEEeccceecCCCccccC---C-----------------------CC
Q 020854 203 PLYSVYAATKAYIDQFSRSLYVEYR--KSGIDVQCQVPLYVATKMASIKRS---S-----------------------FF 254 (320)
Q Consensus 203 ~~~~~Y~asKaal~~~~~~l~~el~--~~gi~v~~v~PG~v~T~~~~~~~~---~-----------------------~~ 254 (320)
++.+.|++||+++++|+++++.|+. ..+|++++++||+++|++...... . ..
T Consensus 156 ~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T PRK06194 156 PAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQKAVGSG 235 (287)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHHHHHHhhhhcc
Confidence 7888999999999999999999987 457999999999999998753110 0 01
Q ss_pred CCCHHHHHHHHHHHhCCCC
Q 020854 255 VPSTDVYARAAMRWIGYEP 273 (320)
Q Consensus 255 ~~~~~~~a~~i~~~l~~~~ 273 (320)
..+++++|+.++..+..+.
T Consensus 236 ~~s~~dva~~i~~~~~~~~ 254 (287)
T PRK06194 236 KVTAEEVAQLVFDAIRAGR 254 (287)
T ss_pred CCCHHHHHHHHHHHHHcCC
Confidence 2588888888888776553
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-31 Score=235.87 Aligned_cols=210 Identities=25% Similarity=0.280 Sum_probs=174.3
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHc
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIE 129 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~ 129 (320)
.+|+++||||+||||++++++|+++|++|++++|+.++++...+. . +.++..+.+|++|. +.+.++.+.+.++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~----~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~~ 77 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL----H-PDRALARLLDVTDFDAIDAVVADAEATFG 77 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh----c-CCCeeEEEccCCCHHHHHHHHHHHHHHhC
Confidence 378999999999999999999999999999999998876654332 1 34578889999985 2344455555555
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhH
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA 209 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~ 209 (320)
. +|+||||||.... .++.+.+.+++++++++|+.|++++++.++|+|++++.++||++||.++.. +.++...|+
T Consensus 78 ~--~d~vv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~--~~~~~~~Y~ 151 (277)
T PRK06180 78 P--IDVLVNNAGYGHE--GAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLI--TMPGIGYYC 151 (277)
T ss_pred C--CCEEEECCCccCC--cccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccC--CCCCcchhH
Confidence 4 5699999998654 567888999999999999999999999999999888889999999999987 678899999
Q ss_pred HHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc------------------------cCCCCCCCHHHHHHHH
Q 020854 210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK------------------------RSSFFVPSTDVYARAA 265 (320)
Q Consensus 210 asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~------------------------~~~~~~~~~~~~a~~i 265 (320)
+||+++++++++++.|+.+.|++|++|+||.++|++.... .+.....+|+++|+.+
T Consensus 152 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 231 (277)
T PRK06180 152 GSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQAI 231 (277)
T ss_pred HHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHHH
Confidence 9999999999999999999999999999999999874310 0112245788888888
Q ss_pred HHHhCCC
Q 020854 266 MRWIGYE 272 (320)
Q Consensus 266 ~~~l~~~ 272 (320)
+..+..+
T Consensus 232 ~~~l~~~ 238 (277)
T PRK06180 232 LAAVESD 238 (277)
T ss_pred HHHHcCC
Confidence 8887765
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-31 Score=235.30 Aligned_cols=223 Identities=24% Similarity=0.262 Sum_probs=175.3
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEE-eCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
++||+++||||++|||+++|++|+++|++|++. +++..+.++..+++... +.++..+.+|++|. +++.++++.+.
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKAL--GFDFIASEGNVGDWDSTKAAFDKVKAE 78 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 358999999999999999999999999998885 45566656666666543 45677889999985 24555666666
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
+++ +|+||||||.... .++.+.+.+++++++++|+.+++.+++.++|.|.+++.++||++||..+.. +.++...
T Consensus 79 ~~~--id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~~~ 152 (246)
T PRK12938 79 VGE--IDVLVNNAGITRD--VVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQK--GQFGQTN 152 (246)
T ss_pred hCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccC--CCCCChh
Confidence 664 5699999998654 467788999999999999999999999999999888789999999998887 6778899
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHH
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGV 287 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l 287 (320)
|+++|+++++++++++.|+.+.||++++|+||+++|++.... .+ +..+.+....+..+...++....++.++
T Consensus 153 y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~-------~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~l 224 (246)
T PRK12938 153 YSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI-------RP-DVLEKIVATIPVRRLGSPDEIGSIVAWL 224 (246)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhc-------Ch-HHHHHHHhcCCccCCcCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999987531 12 2222333333333445555565555555
Q ss_pred Hh
Q 020854 288 LS 289 (320)
Q Consensus 288 ~~ 289 (320)
++
T Consensus 225 ~~ 226 (246)
T PRK12938 225 AS 226 (246)
T ss_pred cC
Confidence 44
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-31 Score=235.57 Aligned_cols=225 Identities=20% Similarity=0.216 Sum_probs=172.1
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeC-CHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
.+++|+++||||++|||+++|+.|+++|++|+++++ +.++.++..+++ +.++..+.+|++|. +++.++++.+
T Consensus 2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~ 76 (253)
T PRK08642 2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL-----GDRAIALQADVTDREQVQAMFATATE 76 (253)
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 356899999999999999999999999999998765 455554444333 24688899999985 2445555555
Q ss_pred HHcCCCeEEEEEccCCCCC----ccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCC
Q 020854 127 AIEGLDVGVLINNVGISYP----YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD 202 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~----~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~ 202 (320)
.++. ++|++|||||.... ...++.+.+.+++++++++|+.+++.+++.++|.|.+++.|+||++||..+.. +.
T Consensus 77 ~~g~-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~--~~ 153 (253)
T PRK08642 77 HFGK-PITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQN--PV 153 (253)
T ss_pred HhCC-CCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccC--CC
Confidence 5554 37799999987421 12457788999999999999999999999999999877789999999987765 45
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHH
Q 020854 203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHS 282 (320)
Q Consensus 203 ~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~ 282 (320)
++...|++||+|+++++++++.|+.++||+||+|+||+++|+..... .+++.-+.+...++.++...|.+.+.
T Consensus 154 ~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~va~ 226 (253)
T PRK08642 154 VPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAA-------TPDEVFDLIAATTPLRKVTTPQEFAD 226 (253)
T ss_pred CCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhcc-------CCHHHHHHHHhcCCcCCCCCHHHHHH
Confidence 56779999999999999999999999999999999999999865421 12233333333344445566666666
Q ss_pred HHHHHHh
Q 020854 283 FIWGVLS 289 (320)
Q Consensus 283 ~~~~l~~ 289 (320)
.+.++++
T Consensus 227 ~~~~l~~ 233 (253)
T PRK08642 227 AVLFFAS 233 (253)
T ss_pred HHHHHcC
Confidence 6666554
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-32 Score=237.00 Aligned_cols=230 Identities=15% Similarity=0.143 Sum_probs=173.1
Q ss_pred CCcccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHH
Q 020854 45 PAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERI 124 (320)
Q Consensus 45 ~~~~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~ 124 (320)
|....+++||+++|||||+|||+++|++|+++|++|++++|+..+..+ .. .. .. ...+.+|++|. + ++
T Consensus 6 ~~~~~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~---~~-~~--~~-~~~~~~D~~~~--~---~~ 73 (245)
T PRK12367 6 PMAQSTWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE---SN-DE--SP-NEWIKWECGKE--E---SL 73 (245)
T ss_pred hhhHHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh---hh-cc--CC-CeEEEeeCCCH--H---HH
Confidence 334456789999999999999999999999999999999998732111 11 11 11 25678999876 2 33
Q ss_pred HHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC---CCcEEEEEcCccccccCC
Q 020854 125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR---KKGAIVNIGSGAAIVIPS 201 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~---~~g~Iv~vsS~~~~~~~~ 201 (320)
.+.+++ +|++|||||... ..+.+.+++++++++|+.|++++++.++|.|.++ +++.+++.||.++.. +
T Consensus 74 ~~~~~~--iDilVnnAG~~~-----~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~--~ 144 (245)
T PRK12367 74 DKQLAS--LDVLILNHGINP-----GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQ--P 144 (245)
T ss_pred HHhcCC--CCEEEECCccCC-----cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccC--C
Confidence 445554 669999999743 2346789999999999999999999999999763 233455556666554 2
Q ss_pred CCCchhhHHHHHHHHHHH---HHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCc--cc
Q 020854 202 DPLYSVYAATKAYIDQFS---RSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPC--CT 276 (320)
Q Consensus 202 ~~~~~~Y~asKaal~~~~---~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~--~~ 276 (320)
++...|++||+|+..+. +.++.|+...|++|+.+.||+++|++.. ...++||++|+.++.++..++. ..
T Consensus 145 -~~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~-----~~~~~~~~vA~~i~~~~~~~~~~~~~ 218 (245)
T PRK12367 145 -ALSPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNP-----IGIMSADFVAKQILDQANLGLYLIIV 218 (245)
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCc-----cCCCCHHHHHHHHHHHHhcCCceEEE
Confidence 35678999999986544 4444455778999999999999999853 1357999999999999988844 33
Q ss_pred CCchHHHHHHHHhhchHHHHHHHHH
Q 020854 277 PYWPHSFIWGVLSILPEKLIDAGRL 301 (320)
Q Consensus 277 ~~~~~~~~~~l~~~~P~~~~~~~~~ 301 (320)
+++++.++.+.++.+|.++..++.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (245)
T PRK12367 219 TPNPLTYLLMPLTELGRRLYSRILY 243 (245)
T ss_pred ecCceeEEEeeHHHHHHHHHHHHHh
Confidence 4566677777889999999887654
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-31 Score=238.28 Aligned_cols=228 Identities=23% Similarity=0.231 Sum_probs=174.3
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
+++++||+++||||++|||+++|++|+++|++|++++|+.++. +..+++.+. +.++..+.+|+++. ++..++++.
T Consensus 2 ~~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (258)
T PRK08628 2 DLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRAL--QPRAEFVQVDLTDDAQCRDAVEQTV 78 (258)
T ss_pred CCCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHH
Confidence 4668899999999999999999999999999999999998876 666666554 34688999999975 234445555
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCc
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
+.++ ++|++|||||.... ..+++.+ +++++.+++|+.+++.+++.+.|.+.++ .|+||++||..+.. +.++.
T Consensus 79 ~~~~--~id~vi~~ag~~~~--~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~--~~~~~ 150 (258)
T PRK08628 79 AKFG--RIDGLVNNAGVNDG--VGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISSKTALT--GQGGT 150 (258)
T ss_pred HhcC--CCCEEEECCcccCC--CcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECCHHhcc--CCCCC
Confidence 5555 46699999997543 3344444 8899999999999999999999988754 58999999999987 66788
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCC-CcccCCchHHHH
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYE-PCCTPYWPHSFI 284 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~-~~~~~~~~~~~~ 284 (320)
..|++||+++++++++++.|+.++||+|++|+||.++|++..... .....+++..+.+...++.+ +...|.+....+
T Consensus 151 ~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 228 (258)
T PRK08628 151 SGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWI--ATFDDPEAKLAAITAKIPLGHRMTTAEEIADTA 228 (258)
T ss_pred chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHh--hhccCHHHHHHHHHhcCCccccCCCHHHHHHHH
Confidence 999999999999999999999999999999999999999854200 00122333333333333332 444555555555
Q ss_pred HHHH
Q 020854 285 WGVL 288 (320)
Q Consensus 285 ~~l~ 288 (320)
.+++
T Consensus 229 ~~l~ 232 (258)
T PRK08628 229 VFLL 232 (258)
T ss_pred HHHh
Confidence 5444
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-31 Score=235.50 Aligned_cols=231 Identities=23% Similarity=0.250 Sum_probs=183.8
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
+.+|+++||||++|||+++|++|+++|++|++++|+.+++++..+++... +.++..+.+|++|. ++..++.+.+.+
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDL--GRRALAVPTDITDEDQCANLVALALERF 80 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHh--CCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence 45899999999999999999999999999999999998888877777653 34688999999975 244455555556
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
++ +|++|||||...+ ..++.+.+.+++++++++|+.|++.+++.+.+.|.++ +++||++||..+.. +.++...|
T Consensus 81 g~--~d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~ii~~sS~~~~~--~~~~~~~Y 154 (258)
T PRK07890 81 GR--VDALVNNAFRVPS-MKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES-GGSIVMINSMVLRH--SQPKYGAY 154 (258)
T ss_pred CC--ccEEEECCccCCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCEEEEEechhhcc--CCCCcchh
Confidence 54 6699999997543 2467788999999999999999999999999998765 47999999999877 67888999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcccc---CCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHH
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKR---SSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIW 285 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~---~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~ 285 (320)
+++|++++.++++++.|++++||+|++|+||++.|++..... ......+.+++.+.+.+..+.++...+.+...++.
T Consensus 155 ~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~ 234 (258)
T PRK07890 155 KMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVL 234 (258)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHHHHHHHH
Confidence 999999999999999999999999999999999999864210 11112334444455455555556666677776666
Q ss_pred HHHh
Q 020854 286 GVLS 289 (320)
Q Consensus 286 ~l~~ 289 (320)
++++
T Consensus 235 ~l~~ 238 (258)
T PRK07890 235 FLAS 238 (258)
T ss_pred HHcC
Confidence 6554
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-31 Score=235.03 Aligned_cols=228 Identities=24% Similarity=0.375 Sum_probs=184.0
Q ss_pred cccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHH
Q 020854 47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERI 124 (320)
Q Consensus 47 ~~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~ 124 (320)
+..++.||+++||||++|||++++++|+++|++|++++|+.+++++..+++... ..++..+.+|+++. +.+.++++
T Consensus 3 ~~~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~ 80 (258)
T PRK06949 3 RSINLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAE--GGAAHVVSLDVTDYQSIKAAVAHA 80 (258)
T ss_pred cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHH
Confidence 355678999999999999999999999999999999999999888887777554 34578899999975 23444444
Q ss_pred HHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC--------CcEEEEEcCccc
Q 020854 125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK--------KGAIVNIGSGAA 196 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~--------~g~Iv~vsS~~~ 196 (320)
.+.++ ++|++|||||.... .++.+.+.++++.++++|+.+++.+++.++|.|.++. .++||++||..+
T Consensus 81 ~~~~~--~~d~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~ 156 (258)
T PRK06949 81 ETEAG--TIDILVNNSGVSTT--QKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAG 156 (258)
T ss_pred HHhcC--CCCEEEECCCCCCC--CCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccc
Confidence 44454 46699999998654 5567788899999999999999999999999987654 479999999998
Q ss_pred cccCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCccc
Q 020854 197 IVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCT 276 (320)
Q Consensus 197 ~~~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~ 276 (320)
.. +.+....|+++|+++..++++++.|+.+.||+|++|+||+++|++..... . ++..+.+...++..+...
T Consensus 157 ~~--~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~------~-~~~~~~~~~~~~~~~~~~ 227 (258)
T PRK06949 157 LR--VLPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHW------E-TEQGQKLVSMLPRKRVGK 227 (258)
T ss_pred cC--CCCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhcc------C-hHHHHHHHhcCCCCCCcC
Confidence 77 66778899999999999999999999999999999999999999875310 1 122234445556567777
Q ss_pred CCchHHHHHHHHh
Q 020854 277 PYWPHSFIWGVLS 289 (320)
Q Consensus 277 ~~~~~~~~~~l~~ 289 (320)
|.+....+.++++
T Consensus 228 p~~~~~~~~~l~~ 240 (258)
T PRK06949 228 PEDLDGLLLLLAA 240 (258)
T ss_pred HHHHHHHHHHHhC
Confidence 7777777777655
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-32 Score=241.05 Aligned_cols=227 Identities=25% Similarity=0.267 Sum_probs=179.4
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++++||+++||||++|||++++++|+++|++|++++|+.++.+ ...+..+.+|++|. +++.++.+.+
T Consensus 5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~ 73 (266)
T PRK06171 5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ-----------HENYQFVPTDVSSAEEVNHTVAEIIE 73 (266)
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc-----------cCceEEEEccCCCHHHHHHHHHHHHH
Confidence 3567999999999999999999999999999999999876532 23577889999985 2445555555
Q ss_pred HHcCCCeEEEEEccCCCCCcc-------ccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccccc
Q 020854 127 AIEGLDVGVLINNVGISYPYA-------RFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI 199 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~-------~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~ 199 (320)
.++. +|++|||||...+.. .++.+.+.++|++++++|+.+++.+++++.|+|.+++.|+||++||.++..
T Consensus 74 ~~g~--id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~- 150 (266)
T PRK06171 74 KFGR--IDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLE- 150 (266)
T ss_pred HcCC--CCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccC-
Confidence 5564 569999999754310 123467899999999999999999999999999888889999999999987
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEecccee-cCCCccccCC----CCCCCHHHHHHHHHH--HhCCC
Q 020854 200 PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVA-TKMASIKRSS----FFVPSTDVYARAAMR--WIGYE 272 (320)
Q Consensus 200 ~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~-T~~~~~~~~~----~~~~~~~~~a~~i~~--~l~~~ 272 (320)
+.++...|++||+|+++++++++.|++++||+||+|+||+++ |++....... .....+++..+.... .++.+
T Consensus 151 -~~~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 229 (266)
T PRK06171 151 -GSEGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLG 229 (266)
T ss_pred -CCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccCC
Confidence 678889999999999999999999999999999999999997 6764421100 011234444444444 45666
Q ss_pred CcccCCchHHHHHHHHhh
Q 020854 273 PCCTPYWPHSFIWGVLSI 290 (320)
Q Consensus 273 ~~~~~~~~~~~~~~l~~~ 290 (320)
+...|++++.++.|+++-
T Consensus 230 r~~~~~eva~~~~fl~s~ 247 (266)
T PRK06171 230 RSGKLSEVADLVCYLLSD 247 (266)
T ss_pred CCCCHHHhhhheeeeecc
Confidence 888888888888887663
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-31 Score=235.94 Aligned_cols=190 Identities=23% Similarity=0.357 Sum_probs=164.0
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++++|++++||||++|||++++++|+++|++|++++|+.+++++..+++... +.++.++.+|+++. +.+.++++.+
T Consensus 6 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (263)
T PRK07814 6 FRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAA--GRRAHVVAADLAHPEATAGLAGQAVE 83 (263)
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 3467999999999999999999999999999999999998888887777653 34688899999985 2344455555
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhc-CCCcEEEEEcCccccccCCCCCc
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK-RKKGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~-~~~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
.+++ +|+||||||.... .++.+.+.+++++++++|+.+++.+++.+.|.|.+ ++.|+||++||..+.. +.++.
T Consensus 84 ~~~~--id~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~ 157 (263)
T PRK07814 84 AFGR--LDIVVNNVGGTMP--NPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRL--AGRGF 157 (263)
T ss_pred HcCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccC--CCCCC
Confidence 5654 5699999997654 55778899999999999999999999999999987 5679999999999987 67888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
..|++||+++++++++++.|+.+ +|+|++|+||+++|++..
T Consensus 158 ~~Y~~sK~a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~ 198 (263)
T PRK07814 158 AAYGTAKAALAHYTRLAALDLCP-RIRVNAIAPGSILTSALE 198 (263)
T ss_pred chhHHHHHHHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhh
Confidence 99999999999999999999987 699999999999999754
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-31 Score=232.21 Aligned_cols=213 Identities=28% Similarity=0.380 Sum_probs=180.8
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHc
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIE 129 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~ 129 (320)
++|+++||||++|||++++++|+++|++|++++|+.++.++..+++.+. +.++..+.+|++|. +.+.++.+.+.++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST--GVKAAAYSIDLSNPEAIAPGIAELLEQFG 82 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4689999999999999999999999999999999998888777777653 34688899999985 2344455555555
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhH
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA 209 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~ 209 (320)
. +|+||||||.... .++.+.+.++++.++++|+.+++.+++.++|.|.+++.++||++||..+.. +.++...|+
T Consensus 83 ~--id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~~~Y~ 156 (241)
T PRK07454 83 C--PDVLINNAGMAYT--GPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARN--AFPQWGAYC 156 (241)
T ss_pred C--CCEEEECCCccCC--CchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCc--CCCCccHHH
Confidence 4 6699999998654 557788899999999999999999999999999888789999999999877 677889999
Q ss_pred HHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc-----cCCCCCCCHHHHHHHHHHHhCCC
Q 020854 210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK-----RSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 210 asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~-----~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
+||++++.++++++.|+++.|+++++|.||+++|++.... .......+|+++|+.++..+..+
T Consensus 157 ~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~ 224 (241)
T PRK07454 157 VSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTETVQADFDRSAMLSPEQVAQTILHLAQLP 224 (241)
T ss_pred HHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccccccccccccccCCCHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999986521 11223578999999999988765
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-31 Score=233.26 Aligned_cols=212 Identities=16% Similarity=0.159 Sum_probs=162.8
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHcC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEG 130 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~ 130 (320)
+|+++||||++|||++++++|+++|++|++++|+.++.. +++... .+..+.+|++|. ++..++++.+.++.
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 74 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQA----GAQCIQADFSTNAGIMAFIDELKQHTDG 74 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHc----CCEEEEcCCCCHHHHHHHHHHHHhhCCC
Confidence 689999999999999999999999999999999876532 333322 256789999975 24455555555553
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC--CcEEEEEcCccccccCCCCCchhh
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK--KGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~--~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
+|++|||||.... ....+.+.+++++++++|+.+++.+++.++|.|.+++ .|+||++||..+.. +.++...|
T Consensus 75 --id~lv~~ag~~~~--~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~--~~~~~~~Y 148 (236)
T PRK06483 75 --LRAIIHNASDWLA--EKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEK--GSDKHIAY 148 (236)
T ss_pred --ccEEEECCccccC--CCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhcc--CCCCCccH
Confidence 6699999997643 3355778999999999999999999999999998765 68999999999877 67788999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHHH
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVL 288 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l~ 288 (320)
++||+|+++|+++++.|+++ +|+||+|+||++.|+... +++..+........++...|.+...++.+++
T Consensus 149 ~asKaal~~l~~~~a~e~~~-~irvn~v~Pg~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~ 217 (236)
T PRK06483 149 AASKAALDNMTLSFAAKLAP-EVKVNSIAPALILFNEGD----------DAAYRQKALAKSLLKIEPGEEEIIDLVDYLL 217 (236)
T ss_pred HHHHHHHHHHHHHHHHHHCC-CcEEEEEccCceecCCCC----------CHHHHHHHhccCccccCCCHHHHHHHHHHHh
Confidence 99999999999999999987 599999999999875421 1112222222233344555666666665554
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-32 Score=243.77 Aligned_cols=218 Identities=26% Similarity=0.247 Sum_probs=177.3
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA 127 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 127 (320)
..+..|++++||||++|||+++|++|+.+|++|++.+||.++.++.+++++...++..+.++++|++|. +.+.++.+.
T Consensus 30 ~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl--~SV~~fa~~ 107 (314)
T KOG1208|consen 30 GIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSL--KSVRKFAEE 107 (314)
T ss_pred cccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCH--HHHHHHHHH
Confidence 345679999999999999999999999999999999999999999999999877788999999999985 444555444
Q ss_pred HcC--CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccccc------
Q 020854 128 IEG--LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI------ 199 (320)
Q Consensus 128 ~~~--~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~------ 199 (320)
+.. .++|++|||||++.+.. ..+.|.++.+|.+|++|++.+++.++|.|+.+.++|||++||..+...
T Consensus 108 ~~~~~~~ldvLInNAGV~~~~~----~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l 183 (314)
T KOG1208|consen 108 FKKKEGPLDVLINNAGVMAPPF----SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDL 183 (314)
T ss_pred HHhcCCCccEEEeCcccccCCc----ccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhc
Confidence 432 24669999999987522 667889999999999999999999999999888899999999886110
Q ss_pred --CC---CCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecC-CCcc---------ccCCCCCCCHHHHHHH
Q 020854 200 --PS---DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATK-MASI---------KRSSFFVPSTDVYARA 264 (320)
Q Consensus 200 --~~---~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~-~~~~---------~~~~~~~~~~~~~a~~ 264 (320)
+. .....+|+.||.+...+++.|++.+.. ||.+++++||.++|+ +.+. .....+..++++.|+.
T Consensus 184 ~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r~~~~~~~l~~~l~~~~~ks~~~ga~t 262 (314)
T KOG1208|consen 184 SGEKAKLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSRVNLLLRLLAKKLSWPLTKSPEQGAAT 262 (314)
T ss_pred cchhccCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceecchHHHHHHHHHHHHHhccCHHHHhhh
Confidence 00 222346999999999999999999987 999999999999999 5551 1111123478888888
Q ss_pred HHHHhCCC
Q 020854 265 AMRWIGYE 272 (320)
Q Consensus 265 i~~~l~~~ 272 (320)
.+...-.+
T Consensus 263 ~~~~a~~p 270 (314)
T KOG1208|consen 263 TCYAALSP 270 (314)
T ss_pred eehhccCc
Confidence 87766554
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-31 Score=229.41 Aligned_cols=231 Identities=26% Similarity=0.287 Sum_probs=196.6
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
++.+++++|||||||||+++|++|+++|+ +|++++|+.+++++ .+..+..+.+|++|. +.++++.+.+
T Consensus 3 ~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---------~~~~~~~~~~D~~~~--~~~~~~~~~~ 71 (238)
T PRK08264 3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---------LGPRVVPLQLDVTDP--ASVAAAAEAA 71 (238)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---------cCCceEEEEecCCCH--HHHHHHHHhc
Confidence 45689999999999999999999999999 99999999876543 145688899999986 5566666665
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
+ ++|++|||||.... ..++.+.+.+++++.+++|+.+++.+++.+.|.+.+++.+++|++||..+.. +.++...|
T Consensus 72 ~--~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~--~~~~~~~y 146 (238)
T PRK08264 72 S--DVTILVNNAGIFRT-GSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWV--NFPNLGTY 146 (238)
T ss_pred C--CCCEEEECCCcCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcc--CCCCchHh
Confidence 5 36699999998432 3567788999999999999999999999999999888889999999998877 67788999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCC-CcccCCchHHHHHHH
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYE-PCCTPYWPHSFIWGV 287 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~-~~~~~~~~~~~~~~l 287 (320)
+++|++++++++.++.++.+.|++++++.||.++|++...... ...+++++++.++..+..+ ..+..++..+.+..+
T Consensus 147 ~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~~~--~~~~~~~~a~~~~~~~~~~~~~i~~~~~~~~~~~~ 224 (238)
T PRK08264 147 SASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGLDA--PKASPADVARQILDALEAGDEEVLPDEMARQVKAA 224 (238)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccCCc--CCCCHHHHHHHHHHHHhCCCCeEeccHHHHHHHHH
Confidence 9999999999999999999999999999999999999654222 2688999999999999887 556777788888888
Q ss_pred HhhchHHHHHH
Q 020854 288 LSILPEKLIDA 298 (320)
Q Consensus 288 ~~~~P~~~~~~ 298 (320)
....|.++++.
T Consensus 225 ~~~~~~~~~~~ 235 (238)
T PRK08264 225 LSADPKNYEEQ 235 (238)
T ss_pred hhcCCchhhHh
Confidence 88888776664
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-30 Score=231.63 Aligned_cols=236 Identities=26% Similarity=0.356 Sum_probs=190.8
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHcC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEG 130 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~ 130 (320)
+++++||||+||||++++++|+++|++|++++|+.++.++..+++... +..+..+.+|++|. ++..++.+.+.++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~- 77 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH--GGEALVVPTDVSDAEACERLIEAAVARFG- 77 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcC-
Confidence 578999999999999999999999999999999998888777777654 34688889999985 2334444444444
Q ss_pred CCeEEEEEccCCCCCccccccCC-CHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhH
Q 020854 131 LDVGVLINNVGISYPYARFFHEV-DQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA 209 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~ 209 (320)
++|++|||||.... .++.+. +.+.+++.+++|+.+++.+++.+.|.|.++ .++||++||..+.. +.++...|+
T Consensus 78 -~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv~~sS~~~~~--~~~~~~~Y~ 151 (263)
T PRK06181 78 -GIDILVNNAGITMW--SRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIVVVSSLAGLT--GVPTRSGYA 151 (263)
T ss_pred -CCCEEEECCCcccc--cchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEEEEecccccC--CCCCccHHH
Confidence 46699999998654 456677 889999999999999999999999988654 58999999999887 677889999
Q ss_pred HHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc----------cC--CCCCCCHHHHHHHHHHHhCCC-Cccc
Q 020854 210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK----------RS--SFFVPSTDVYARAAMRWIGYE-PCCT 276 (320)
Q Consensus 210 asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~----------~~--~~~~~~~~~~a~~i~~~l~~~-~~~~ 276 (320)
+||+++++++++++.++.++|++++++.||++.|++.... .+ .....+|+++|+.++..+..+ +...
T Consensus 152 ~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~~~~~~~ 231 (263)
T PRK06181 152 ASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGKPLGKSPMQESKIMSAEECAEAILPAIARRKRLLV 231 (263)
T ss_pred HHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhccccccccccccccccCCCCHHHHHHHHHHHhhCCCCEEe
Confidence 9999999999999999999999999999999999986421 00 114679999999999999876 4444
Q ss_pred CCchHHHHHHHHhhchHHHHH
Q 020854 277 PYWPHSFIWGVLSILPEKLID 297 (320)
Q Consensus 277 ~~~~~~~~~~l~~~~P~~~~~ 297 (320)
.....+...++.+..|..+.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~ 252 (263)
T PRK06181 232 MSLRGRLGRWLKLIAPGLVDK 252 (263)
T ss_pred cCchHHHHHHHHHHCHHHHHH
Confidence 443444556677788875544
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-31 Score=231.23 Aligned_cols=197 Identities=18% Similarity=0.193 Sum_probs=157.1
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeE
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG 134 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 134 (320)
.++||||++|||++++++|+++|++|++++|+.+++++..+++ .+..+++|++|. +.++++.+.+.. ++|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~--~~v~~~~~~~~~-~id 71 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-------DVDAIVCDNTDP--ASLEEARGLFPH-HLD 71 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-------cCcEEecCCCCH--HHHHHHHHHHhh-cCc
Confidence 4899999999999999999999999999999998877665543 245778999886 555666555543 477
Q ss_pred EEEEccCCCCC----ccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHH
Q 020854 135 VLINNVGISYP----YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA 210 (320)
Q Consensus 135 ~lI~nAG~~~~----~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~a 210 (320)
++|||||.... ...++.+ +.++|++++++|+.+++++++.++|.|.+ +|+||++||.+. +....|++
T Consensus 72 ~lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~------~~~~~Y~a 142 (223)
T PRK05884 72 TIVNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS--GGSIISVVPENP------PAGSAEAA 142 (223)
T ss_pred EEEECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCeEEEEecCCC------CCccccHH
Confidence 99999985321 0112334 57889999999999999999999999953 589999999762 34578999
Q ss_pred HHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCC
Q 020854 211 TKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 211 sKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~ 271 (320)
||+|+.+|+++|+.|++++||+||+|+||+++|++...... ....+|+++++.+...+..
T Consensus 143 sKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~~~-~p~~~~~~ia~~~~~l~s~ 202 (223)
T PRK05884 143 IKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDGLSR-TPPPVAAEIARLALFLTTP 202 (223)
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhhccC-CCCCCHHHHHHHHHHHcCc
Confidence 99999999999999999999999999999999998653211 1224788888888776653
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-31 Score=233.35 Aligned_cols=212 Identities=23% Similarity=0.237 Sum_probs=174.8
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEE-EeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCc--HHHHHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDL--DEGVERIKEAI 128 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~--~~~~~~~~~~~ 128 (320)
.|++++||||++|||++++++|+++|++|++ .+|+.++.++..+++++. +..+..+.+|++|.. ...++++.+.+
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEAL--GRKALAVKANVGDVEKIKEMFAQIDEEF 80 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4799999999999999999999999999876 588888888887777654 456888999999852 44455555555
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
+. +|+||||||.... .++.+.+.+.++.++++|+.+++.++++++|.|.+++.|+||++||..+.. +.++...|
T Consensus 81 ~~--id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~~~y 154 (250)
T PRK08063 81 GR--LDVFVNNAASGVL--RPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIR--YLENYTTV 154 (250)
T ss_pred CC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcc--CCCCccHH
Confidence 54 6699999998654 567788999999999999999999999999999888889999999988876 56778899
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc-------------cCCCCCCCHHHHHHHHHHHhCC
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK-------------RSSFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~-------------~~~~~~~~~~~~a~~i~~~l~~ 271 (320)
++||+++++|+++++.|+.+.||++++|+||+++|++.... .+.....+++++|+.++..+..
T Consensus 155 ~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~ 230 (250)
T PRK08063 155 GVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFLCSP 230 (250)
T ss_pred HHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCc
Confidence 99999999999999999999999999999999999985421 0111245667777776666543
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-32 Score=222.09 Aligned_cols=182 Identities=29% Similarity=0.374 Sum_probs=156.4
Q ss_pred CCCEEEEECCC-CcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHH--
Q 020854 52 YGSWALVTGPT-DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI-- 128 (320)
Q Consensus 52 ~gk~vlITGas-~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-- 128 (320)
..|.|+|||+| ||||.++|++|++.|+.|+.++|+.+...++.. ...+....+|++++ +.+..+..++
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~-------~~gl~~~kLDV~~~--~~V~~v~~evr~ 76 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAI-------QFGLKPYKLDVSKP--EEVVTVSGEVRA 76 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHH-------hhCCeeEEeccCCh--HHHHHHHHHHhh
Confidence 35889999988 799999999999999999999999887665543 23488899999986 4444444433
Q ss_pred -cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 129 -EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 129 -~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
...++|+|+||||..- ..|..|.+.++.+++|++|++|++.+++++. ++..+.+|.|||++|.++.. +.|..+.
T Consensus 77 ~~~Gkld~L~NNAG~~C--~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~-h~likaKGtIVnvgSl~~~v--pfpf~~i 151 (289)
T KOG1209|consen 77 NPDGKLDLLYNNAGQSC--TFPALDATIAAVEQCFKVNVFGHIRMCRALS-HFLIKAKGTIVNVGSLAGVV--PFPFGSI 151 (289)
T ss_pred CCCCceEEEEcCCCCCc--ccccccCCHHHHHhhhccceeeeehHHHHHH-HHHHHccceEEEecceeEEe--ccchhhh
Confidence 2336889999999753 3677899999999999999999999999999 45556789999999999998 8999999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
|++||+|+.+++++|+.|+++.||+|..+.||-|.|++..
T Consensus 152 YsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~ 191 (289)
T KOG1209|consen 152 YSASKAAIHAYARTLRLELKPFGVRVINAITGGVATDIAD 191 (289)
T ss_pred hhHHHHHHHHhhhhcEEeeeccccEEEEecccceeccccc
Confidence 9999999999999999999999999999999999999876
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-31 Score=220.71 Aligned_cols=210 Identities=25% Similarity=0.370 Sum_probs=167.9
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHc-CCeEEE-EeCCHHHHHHHHHHHHhhc-CCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKT-GLNLVL-VGRNPDKLKDVSDSIQAKY-AKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~-G~~Vil-~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
-|.++||||.+|||..++++|.+. |-.+++ +.||.++.. +++...+ .+.+++.+++|++++ ++++++++.+.
T Consensus 3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~---~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~i 79 (249)
T KOG1611|consen 3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAA---TELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKI 79 (249)
T ss_pred CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhh---HHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhh
Confidence 356999999999999999999975 555554 556787752 2222211 267899999999975 35666666666
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCC-----------cEEEEEcCccc
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKK-----------GAIVNIGSGAA 196 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~-----------g~Iv~vsS~~~ 196 (320)
.+...+|+||||||+..+. ....+.+.+.|.+.+++|..|++.++|+|+|++++... +.|||+||.++
T Consensus 80 Vg~~GlnlLinNaGi~~~y-~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~ 158 (249)
T KOG1611|consen 80 VGSDGLNLLINNAGIALSY-NTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAG 158 (249)
T ss_pred cccCCceEEEeccceeeec-ccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeecccc
Confidence 6666788999999998763 23456678889999999999999999999999986542 48999999888
Q ss_pred cccC-CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhC
Q 020854 197 IVIP-SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIG 270 (320)
Q Consensus 197 ~~~~-~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~ 270 (320)
.... ...+..+|.+||+|+++|+|+++.||++.+|-|..+|||||+|+|... ....++|+.+..+++.+.
T Consensus 159 s~~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~----~a~ltveeSts~l~~~i~ 229 (249)
T KOG1611|consen 159 SIGGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGK----KAALTVEESTSKLLASIN 229 (249)
T ss_pred ccCCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCC----CcccchhhhHHHHHHHHH
Confidence 7632 134478999999999999999999999999999999999999999873 335789999999988775
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-31 Score=235.35 Aligned_cols=187 Identities=24% Similarity=0.343 Sum_probs=159.4
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
.+++|+++||||++|||.+++++|+++|++|++++|+.+++++..+++... +.++..+.+|++|. +++.++++.+.
T Consensus 6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~i~~~~~~~~~~ 83 (264)
T PRK07576 6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQA--GPEGLGVSADVRDYAAVEAAFAQIADE 83 (264)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 467999999999999999999999999999999999998887777777654 33567889999975 23444555555
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
++. +|++|||||.... .++.+.+.+++++++++|+.|+++++++++|.|.++ +|+||++||.++.. +.++...
T Consensus 84 ~~~--iD~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-~g~iv~iss~~~~~--~~~~~~~ 156 (264)
T PRK07576 84 FGP--IDVLVSGAAGNFP--APAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP-GASIIQISAPQAFV--PMPMQAH 156 (264)
T ss_pred cCC--CCEEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCEEEEECChhhcc--CCCCccH
Confidence 554 6699999997643 567788999999999999999999999999998754 58999999998877 6788899
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEecccee-cCC
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVA-TKM 245 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~-T~~ 245 (320)
|++||+++++|+++++.|+.++||+|++|+||.++ |+.
T Consensus 157 Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~ 195 (264)
T PRK07576 157 VCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEG 195 (264)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHH
Confidence 99999999999999999999999999999999997 553
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-31 Score=235.35 Aligned_cols=210 Identities=24% Similarity=0.321 Sum_probs=176.4
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHc
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIE 129 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~ 129 (320)
.+|+++||||+||||++++++|+++|++|++++|+.+++++..+.+ ...+..+++|++|. +++.++++.+.++
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 76 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY-----GDRLLPLALDVTDRAAVFAAVETAVEHFG 76 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-----cCCeeEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4789999999999999999999999999999999988876655433 33577889999985 2344455555555
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhH
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA 209 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~ 209 (320)
. +|++|||||.... .++.+.+.+++++++++|+.+++.+++.++|.|++++.++||++||.++.. +.++...|+
T Consensus 77 ~--~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~--~~~~~~~Y~ 150 (275)
T PRK08263 77 R--LDIVVNNAGYGLF--GMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGIS--AFPMSGIYH 150 (275)
T ss_pred C--CCEEEECCCCccc--cccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcC--CCCCccHHH
Confidence 4 5699999998754 667888999999999999999999999999999888889999999999987 678889999
Q ss_pred HHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc--------------------cCCCCC-CCHHHHHHHHHHH
Q 020854 210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK--------------------RSSFFV-PSTDVYARAAMRW 268 (320)
Q Consensus 210 asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~--------------------~~~~~~-~~~~~~a~~i~~~ 268 (320)
+||+++++++++++.|+++.||+|+.|+||.++|++.... .+.... .+|+++|+.++..
T Consensus 151 ~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l 230 (275)
T PRK08263 151 ASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAEALLKL 230 (275)
T ss_pred HHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999987310 011123 6899999999998
Q ss_pred hCCC
Q 020854 269 IGYE 272 (320)
Q Consensus 269 l~~~ 272 (320)
+..+
T Consensus 231 ~~~~ 234 (275)
T PRK08263 231 VDAE 234 (275)
T ss_pred HcCC
Confidence 8765
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-30 Score=228.60 Aligned_cols=214 Identities=33% Similarity=0.435 Sum_probs=182.1
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
+.+++++||||++|||++++++|+++|++|++++|+.++.++..+++... +.++..+.+|+++. +++.++++.+.+
T Consensus 5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (239)
T PRK07666 5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY--GVKVVIATADVSDYEEVTAAIEQLKNEL 82 (239)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--CCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 45899999999999999999999999999999999998888877777543 45788899999875 234445555545
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
+ ++|++|||||.... .++.+.+.+++++.+++|+.+++.+++.+.|.+.+++.+++|++||..+.. +.++...|
T Consensus 83 ~--~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~--~~~~~~~Y 156 (239)
T PRK07666 83 G--SIDILINNAGISKF--GKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQK--GAAVTSAY 156 (239)
T ss_pred C--CccEEEEcCccccC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhcc--CCCCCcch
Confidence 5 46699999998653 456778899999999999999999999999999888889999999999987 66778899
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc----ccCCCCCCCHHHHHHHHHHHhCCC
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI----KRSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~----~~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
+.||+++..++++++.|+.+.||++++|+||.++|++... ........+++++|+.+++.+..+
T Consensus 157 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~a~~~~~~l~~~ 224 (239)
T PRK07666 157 SASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGLTDGNPDKVMQPEDLAEFIVAQLKLN 224 (239)
T ss_pred HHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhccccccCCCCCCCHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999998652 122334679999999999999876
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-31 Score=241.69 Aligned_cols=215 Identities=15% Similarity=0.142 Sum_probs=169.8
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcC-CeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G-~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
.+|+++|||||+|||+++|++|+++| ++|++++|+.++.++..+++.. .+..+..+.+|++|. +++.++++.+.+
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 79 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGM--PKDSYTIMHLDLGSLDSVRQFVQQFRESG 79 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcC--CCCeEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 57999999999999999999999999 9999999999988887777643 245677889999985 244455554444
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC--CcEEEEEcCccccccC------
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK--KGAIVNIGSGAAIVIP------ 200 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~--~g~Iv~vsS~~~~~~~------ 200 (320)
+ ++|++|||||+..+ ..+..+.+.+++++++++|+.|++.+++.++|+|++++ .|+||++||.++....
T Consensus 80 ~--~iD~lI~nAG~~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~ 156 (314)
T TIGR01289 80 R--PLDALVCNAAVYFP-TAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVP 156 (314)
T ss_pred C--CCCEEEECCCcccc-CccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCC
Confidence 4 46699999998543 22344678899999999999999999999999998764 5899999999874310
Q ss_pred -------------------------CCCCchhhHHHHHHHHHHHHHHHHHHc-cCCceEEEEeccce-ecCCCccccC--
Q 020854 201 -------------------------SDPLYSVYAATKAYIDQFSRSLYVEYR-KSGIDVQCQVPLYV-ATKMASIKRS-- 251 (320)
Q Consensus 201 -------------------------~~~~~~~Y~asKaal~~~~~~l~~el~-~~gi~v~~v~PG~v-~T~~~~~~~~-- 251 (320)
+..+..+|++||+|+..+++.|++++. +.||+|++|+||+| +|+|......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~ 236 (314)
T TIGR01289 157 PKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLF 236 (314)
T ss_pred CcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHH
Confidence 012356799999999999999999985 46999999999999 7998653110
Q ss_pred -----------CCCCCCHHHHHHHHHHHhCC
Q 020854 252 -----------SFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 252 -----------~~~~~~~~~~a~~i~~~l~~ 271 (320)
.....+|++.|+.++..+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~ 267 (314)
T TIGR01289 237 RTLFPPFQKYITKGYVSEEEAGERLAQVVSD 267 (314)
T ss_pred HHHHHHHHHHHhccccchhhhhhhhHHhhcC
Confidence 11246889999988887754
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-31 Score=230.78 Aligned_cols=191 Identities=29% Similarity=0.407 Sum_probs=165.5
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
++++++++||||+||||.+++++|+++|++|++++|+.++.++..+++.. +.++.++.+|++|. +++.++++.+.
T Consensus 2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (251)
T PRK07231 2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA---GGRAIAVAADVSDEADVEAAVAAALER 78 (251)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 35689999999999999999999999999999999999888877776644 45688999999985 23444555555
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
++ ++|+||||||.... ..++.+.+.+.+++.+++|+.+++.+++.+++.|.+++.++||++||..+.. +.++...
T Consensus 79 ~~--~~d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~ 153 (251)
T PRK07231 79 FG--SVDILVNNAGTTHR-NGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLR--PRPGLGW 153 (251)
T ss_pred hC--CCCEEEECCCCCCC-CCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcC--CCCCchH
Confidence 55 46699999998543 3457788999999999999999999999999999888889999999999987 6788999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI 248 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~ 248 (320)
|+.||++++.++++++.++++.||+|++++||+++|++...
T Consensus 154 y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~ 194 (251)
T PRK07231 154 YNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEA 194 (251)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchh
Confidence 99999999999999999999989999999999999998663
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-30 Score=231.48 Aligned_cols=219 Identities=18% Similarity=0.204 Sum_probs=175.1
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
++||+++|||||+|||+++|++|+++|++|++++|+.+++++..+++....+...+.++++|++|. +.+.++++.+.+
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 81 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY 81 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 358999999999999999999999999999999999999888888886544445567779999985 244455555555
Q ss_pred cCCCeEEEEEccCCCCC-ccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCC------
Q 020854 129 EGLDVGVLINNVGISYP-YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS------ 201 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~------ 201 (320)
+. +|+||||||.... ...++.+.+.+.++.++++|+.+++.+++.++|.|.+++.++||++||..+...+.
T Consensus 82 ~~--id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~ 159 (256)
T PRK09186 82 GK--IDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEG 159 (256)
T ss_pred CC--ccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhccc
Confidence 53 6699999986432 12457788999999999999999999999999999988889999999988764211
Q ss_pred --CCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc-------ccCCCCCCCHHHHHHHHHHHhCC
Q 020854 202 --DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI-------KRSSFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 202 --~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~-------~~~~~~~~~~~~~a~~i~~~l~~ 271 (320)
......|++||+++++++++++.|+.+.||+|+.++||.+.++.... ..+.....+|+++|+.++..+..
T Consensus 160 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 238 (256)
T PRK09186 160 TSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFLNAYKKCCNGKGMLDPDDICGTLVFLLSD 238 (256)
T ss_pred cccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHHHHHHHHhcCCccCCCCHHHhhhhHhheecc
Confidence 01224699999999999999999999999999999999998765321 12223457888888888887754
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-30 Score=231.41 Aligned_cols=213 Identities=24% Similarity=0.250 Sum_probs=169.7
Q ss_pred ccCCCEEEEECCCC--cHHHHHHHHHHHcCCeEEEEeCC-----------HHHHHHHHHHHHhhcCCceEEEEEEeCCCC
Q 020854 50 RKYGSWALVTGPTD--GIGKSFAFQLAKTGLNLVLVGRN-----------PDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116 (320)
Q Consensus 50 ~~~gk~vlITGas~--GIG~ala~~l~~~G~~Vil~~r~-----------~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~ 116 (320)
+++||+++|||||+ |||.+++++|+++|++|++++|+ ........+++... +.+++++++|+++.
T Consensus 2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~ 79 (256)
T PRK12748 2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESY--GVRCEHMEIDLSQP 79 (256)
T ss_pred CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhc--CCeEEEEECCCCCH
Confidence 46799999999994 99999999999999999999987 22222244444332 44688999999985
Q ss_pred --cHHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCc
Q 020854 117 --LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSG 194 (320)
Q Consensus 117 --~~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~ 194 (320)
+...++++.+.++. +|+||||||.... .++.+.+.+++++.+++|+.|++.+++++.|.|..++.++||++||.
T Consensus 80 ~~~~~~~~~~~~~~g~--id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~ 155 (256)
T PRK12748 80 YAPNRVFYAVSERLGD--PSILINNAAYSTH--TRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSG 155 (256)
T ss_pred HHHHHHHHHHHHhCCC--CCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCc
Confidence 24455555555554 6699999998653 56778899999999999999999999999999987778999999999
Q ss_pred cccccCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc--------ccCCCCCCCHHHHHHHHH
Q 020854 195 AAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI--------KRSSFFVPSTDVYARAAM 266 (320)
Q Consensus 195 ~~~~~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~--------~~~~~~~~~~~~~a~~i~ 266 (320)
.+.. +.++...|++||+|+++++++++.|+.+.||+|++++||+++|++... ..+.....+|+++|+.+.
T Consensus 156 ~~~~--~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 233 (256)
T PRK12748 156 QSLG--PMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEELKHHLVPKFPQGRVGEPVDAARLIA 233 (256)
T ss_pred cccC--CCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhHHHhhhccCCCCCCcCHHHHHHHHH
Confidence 8877 667888999999999999999999999999999999999999997542 111122456777777766
Q ss_pred HHhC
Q 020854 267 RWIG 270 (320)
Q Consensus 267 ~~l~ 270 (320)
..+.
T Consensus 234 ~l~~ 237 (256)
T PRK12748 234 FLVS 237 (256)
T ss_pred HHhC
Confidence 5443
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=8e-31 Score=239.50 Aligned_cols=211 Identities=18% Similarity=0.161 Sum_probs=167.8
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
.+++||+++||||++|||+++|++|+++|++|++++|+.++.++..+++. .+..+.+|++|. +++.++++.+
T Consensus 22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~------~v~~~~~Dl~d~~~v~~~~~~~~~ 95 (315)
T PRK06196 22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID------GVEVVMLDLADLESVRAFAERFLD 95 (315)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh------hCeEEEccCCCHHHHHHHHHHHHh
Confidence 34679999999999999999999999999999999999988877766653 267889999985 2333444444
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC------
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP------ 200 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~------ 200 (320)
.++ ++|+||||||.... ..+.+.++++..+++|+.|++.+++.++|.|.+++.++||++||..+...+
T Consensus 96 ~~~--~iD~li~nAg~~~~----~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~ 169 (315)
T PRK06196 96 SGR--RIDILINNAGVMAC----PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDP 169 (315)
T ss_pred cCC--CCCEEEECCCCCCC----CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCcccc
Confidence 434 46799999998643 134567789999999999999999999999988777999999998664210
Q ss_pred ----CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccC---------------C-CCCCCHHH
Q 020854 201 ----SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRS---------------S-FFVPSTDV 260 (320)
Q Consensus 201 ----~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~---------------~-~~~~~~~~ 260 (320)
+.+....|++||+++..+++.++.+++++||+|++|+||+++|++...... . ....+|++
T Consensus 170 ~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (315)
T PRK06196 170 HFTRGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKTPAQ 249 (315)
T ss_pred CccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCCHhH
Confidence 233457899999999999999999999999999999999999998653110 0 02457888
Q ss_pred HHHHHHHHhCC
Q 020854 261 YARAAMRWIGY 271 (320)
Q Consensus 261 ~a~~i~~~l~~ 271 (320)
.|..++..+..
T Consensus 250 ~a~~~~~l~~~ 260 (315)
T PRK06196 250 GAATQVWAATS 260 (315)
T ss_pred HHHHHHHHhcC
Confidence 88888877754
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.5e-30 Score=229.31 Aligned_cols=222 Identities=23% Similarity=0.289 Sum_probs=176.5
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeC-CHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++|+++||||++|||.++|++|+++|++|+++.+ +.+..++..+++.+. +.++.++.+|++|. +++.++++.+.
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKE--GHDVYAVQADVSKVEDANRLVEEAVNH 81 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 45899999999999999999999999999987654 566666666777553 35688999999985 24455555555
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
++. +|+||||||.... ..+.+.+.+.+++++++|+.+++.+++.++|.|.+++.++||++||..+.. +.++...
T Consensus 82 ~~~--id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~ 155 (247)
T PRK12935 82 FGK--VDILVNNAGITRD--RTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQA--GGFGQTN 155 (247)
T ss_pred cCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcC--CCCCCcc
Confidence 554 6699999998754 456788889999999999999999999999999887789999999999877 5677899
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHH
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGV 287 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l 287 (320)
|++||+++++++++++.|+.+.||+++.|+||+++|++... .++...+.....+..++...+++....+.++
T Consensus 156 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~--------~~~~~~~~~~~~~~~~~~~~~edva~~~~~~ 227 (247)
T PRK12935 156 YSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAE--------VPEEVRQKIVAKIPKKRFGQADEIAKGVVYL 227 (247)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhh--------ccHHHHHHHHHhCCCCCCcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998653 1233344444444444455555555555544
Q ss_pred H
Q 020854 288 L 288 (320)
Q Consensus 288 ~ 288 (320)
+
T Consensus 228 ~ 228 (247)
T PRK12935 228 C 228 (247)
T ss_pred c
Confidence 4
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-30 Score=230.97 Aligned_cols=224 Identities=25% Similarity=0.275 Sum_probs=171.8
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
++||+++||||++|||.+++++|+++|++|++++|+.++.++..+++ . ...+.+|++|. +++.++++.+..
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~-----~--~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV-----G--GLFVPTDVTDEDAVNALFDTAAETY 77 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc-----C--CcEEEeeCCCHHHHHHHHHHHHHHc
Confidence 56999999999999999999999999999999999988776655544 1 15678999985 233444444444
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
+ ++|++|||||...+...++.+.+.+.+++++++|+.|++.+++.++|.|.+++.|+||++||..+..+ ..++...|
T Consensus 78 ~--~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g-~~~~~~~Y 154 (255)
T PRK06057 78 G--SVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMG-SATSQISY 154 (255)
T ss_pred C--CCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccC-CCCCCcch
Confidence 4 46699999998643234567788999999999999999999999999998878899999999887662 12367789
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHHH
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVL 288 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l~ 288 (320)
++||+++.+++++++.|+.+.||+|++|+||+++|++.... ....+++.++.+. .++.++...|.+....+.+++
T Consensus 155 ~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~ 229 (255)
T PRK06057 155 TASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQEL----FAKDPERAARRLV-HVPMGRFAEPEEIAAAVAFLA 229 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhh----ccCCHHHHHHHHh-cCCCCCCcCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999987531 1123444433332 233345555666666555544
Q ss_pred h
Q 020854 289 S 289 (320)
Q Consensus 289 ~ 289 (320)
+
T Consensus 230 ~ 230 (255)
T PRK06057 230 S 230 (255)
T ss_pred C
Confidence 3
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-30 Score=229.68 Aligned_cols=223 Identities=24% Similarity=0.244 Sum_probs=171.9
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
++||+++||||++|||++++++|+++|++|++++|+.+++++..+++ +.++..+++|++|. +.+.++.+.+.+
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL-----GESALVIRADAGDVAAQKALAQALAEAF 78 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 56899999999999999999999999999999999987776655544 34678889999975 234445555555
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
++ +|++|||||.... .++.+.+.+++++++++|+.+++.+++++.|+|.. .+++|++||.++.. +.+....|
T Consensus 79 ~~--id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~i~~~S~~~~~--~~~~~~~Y 150 (249)
T PRK06500 79 GR--LDAVFINAGVAKF--APLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN--PASIVLNGSINAHI--GMPNSSVY 150 (249)
T ss_pred CC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEechHhcc--CCCCccHH
Confidence 54 6699999998653 55778899999999999999999999999998853 47899999988877 66788999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHHH
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVL 288 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l~ 288 (320)
+++|+++++++++++.|++++||+|++++||.++|++...... .....+.+.+.+....+.++...|.+....+.+++
T Consensus 151 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~ 228 (249)
T PRK06500 151 AASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGL--PEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLA 228 (249)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhcc--CccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999998642100 00112233333333333334445555555555544
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.8e-31 Score=239.70 Aligned_cols=210 Identities=17% Similarity=0.164 Sum_probs=165.0
Q ss_pred EEECCCCcHHHHHHHHHHHcC-CeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHcCCCe
Q 020854 57 LVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEGLDV 133 (320)
Q Consensus 57 lITGas~GIG~ala~~l~~~G-~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~i 133 (320)
||||||+|||+++|++|+++| ++|++++|+.++.++..+++... +..+..+.+|++|. +++.++.+.+.++ ++
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~--~i 76 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMP--KDSYTVMHLDLASLDSVRQFVDNFRRSGR--PL 76 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEEecCCCHHHHHHHHHHHHhcCC--CC
Confidence 699999999999999999999 99999999998888777776432 34678889999985 2334444444334 46
Q ss_pred EEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC--CcEEEEEcCcccccc------C-----
Q 020854 134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK--KGAIVNIGSGAAIVI------P----- 200 (320)
Q Consensus 134 d~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~--~g~Iv~vsS~~~~~~------~----- 200 (320)
|+||||||+..+ ..++.+.+.+++++++++|+.|++.+++.++|.|.+++ +|+||++||.++... +
T Consensus 77 D~lInnAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~ 155 (308)
T PLN00015 77 DVLVCNAAVYLP-TAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANL 155 (308)
T ss_pred CEEEECCCcCCC-CCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccch
Confidence 799999998643 23456788999999999999999999999999998776 689999999887431 0
Q ss_pred ----------------------CCCCchhhHHHHHHHHHHHHHHHHHHcc-CCceEEEEeccce-ecCCCcccc------
Q 020854 201 ----------------------SDPLYSVYAATKAYIDQFSRSLYVEYRK-SGIDVQCQVPLYV-ATKMASIKR------ 250 (320)
Q Consensus 201 ----------------------~~~~~~~Y~asKaal~~~~~~l~~el~~-~gi~v~~v~PG~v-~T~~~~~~~------ 250 (320)
..++..+|++||+|...+++.+++++.+ .||+|++|+||+| +|+|.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~ 235 (308)
T PLN00015 156 GDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLL 235 (308)
T ss_pred hhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHH
Confidence 0124577999999999999999999975 6999999999999 799865310
Q ss_pred -------CCCCCCCHHHHHHHHHHHhCC
Q 020854 251 -------SSFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 251 -------~~~~~~~~~~~a~~i~~~l~~ 271 (320)
+.....+||+.|+.++..+..
T Consensus 236 ~~~~~~~~~~~~~~pe~~a~~~~~l~~~ 263 (308)
T PLN00015 236 FPPFQKYITKGYVSEEEAGKRLAQVVSD 263 (308)
T ss_pred HHHHHHHHhcccccHHHhhhhhhhhccc
Confidence 111246888888888876653
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.9e-30 Score=227.52 Aligned_cols=212 Identities=25% Similarity=0.350 Sum_probs=176.6
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
+++|+++||||+||||++++++|+++|++|++++|+.+++++..++++.. +.++..+++|++|. +++.++++.+.+
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 82 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAA--GGRAHAIAADLADPASVQRFFDAAAAAL 82 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 45899999999999999999999999999999999999888887777654 34688899999975 233444444544
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
+ ++|++|||+|.... .++.+.+.+++++.+++|+.+++.+++.+.|.|.+++.|++|++||..+.. +.+....|
T Consensus 83 ~--~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~y 156 (250)
T PRK12939 83 G--GLDGLVNNAGITNS--KSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALW--GAPKLGAY 156 (250)
T ss_pred C--CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhcc--CCCCcchH
Confidence 4 46699999998764 556788999999999999999999999999999888889999999998887 67778899
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcccc------------CCCCCCCHHHHHHHHHHHhC
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKR------------SSFFVPSTDVYARAAMRWIG 270 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~------------~~~~~~~~~~~a~~i~~~l~ 270 (320)
+++|+++++++++++.++.+.||+|++|+||.++|++..... +.....+++++|+.++..+.
T Consensus 157 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 230 (250)
T PRK12939 157 VASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYLKGRALERLQVPDDVAGAVLFLLS 230 (250)
T ss_pred HHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999875311 12234566777777666654
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.5e-31 Score=230.30 Aligned_cols=177 Identities=27% Similarity=0.353 Sum_probs=153.9
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
++||+++||||++|||++++++|+++|++|++++|+.... . ..++..+.+|+++. ++++.+.+++
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~-----~~~~~~~~~D~~~~----~~~~~~~~~~ 67 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD------L-----SGNFHFLQLDLSDD----LEPLFDWVPS 67 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc------c-----CCcEEEEECChHHH----HHHHHHhhCC
Confidence 5699999999999999999999999999999999985431 0 23577888998764 5666666665
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHH
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA 210 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~a 210 (320)
+|++|||||.... ..++.+.+.+++++++++|+.+++++++.++|.+.+++.++||++||.++.. +.++...|++
T Consensus 68 --id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~Y~~ 142 (235)
T PRK06550 68 --VDILCNTAGILDD-YKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFV--AGGGGAAYTA 142 (235)
T ss_pred --CCEEEECCCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcc--CCCCCcccHH
Confidence 5699999997542 2456788899999999999999999999999999888889999999999987 6678899999
Q ss_pred HHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 211 TKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 211 sKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
+|+++++++++++.|+.++||+|++|+||+++|++..
T Consensus 143 sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~ 179 (235)
T PRK06550 143 SKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTA 179 (235)
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccc
Confidence 9999999999999999999999999999999999864
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.8e-30 Score=234.39 Aligned_cols=225 Identities=22% Similarity=0.270 Sum_probs=173.8
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHH-HHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD-KLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
.+++||+++||||++|||.+++++|+++|++|++++|+.+ ..+...+.+... +.++.++.+|++|. +++.++++.
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~i~ 119 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKE--GVKCLLIPGDVSDEAFCKDAVEETV 119 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHH
Confidence 3567999999999999999999999999999999999864 345555555432 45688899999985 244555555
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCc
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
+.++. +|+||||||.... ..++.+.+.+++++++++|+.+++.+++++.+.|.. .++||++||.++.. +.++.
T Consensus 120 ~~~~~--iD~lI~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~--~g~iV~isS~~~~~--~~~~~ 192 (290)
T PRK06701 120 RELGR--LDILVNNAAFQYP-QQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ--GSAIINTGSITGYE--GNETL 192 (290)
T ss_pred HHcCC--CCEEEECCcccCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh--CCeEEEEecccccC--CCCCc
Confidence 55554 5699999997643 245778899999999999999999999999998853 48999999999987 66788
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHH
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIW 285 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~ 285 (320)
..|++||+|+++++++++.++.+.||+|++|+||.++|++.... ..++ ..+........++...+.++...+.
T Consensus 193 ~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~------~~~~-~~~~~~~~~~~~~~~~~~dva~~~~ 265 (290)
T PRK06701 193 IDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSD------FDEE-KVSQFGSNTPMQRPGQPEELAPAYV 265 (290)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccc------cCHH-HHHHHHhcCCcCCCcCHHHHHHHHH
Confidence 89999999999999999999999999999999999999986531 1122 2222233333344455555555555
Q ss_pred HHHh
Q 020854 286 GVLS 289 (320)
Q Consensus 286 ~l~~ 289 (320)
++++
T Consensus 266 ~ll~ 269 (290)
T PRK06701 266 FLAS 269 (290)
T ss_pred HHcC
Confidence 5444
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.9e-30 Score=229.48 Aligned_cols=228 Identities=25% Similarity=0.259 Sum_probs=179.7
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHcCC
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEGL 131 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~ 131 (320)
|+++||||+||||.+++++|+++|++|++++|+.+++++..+++... +..+..+.+|++|. +.+.++.+.+.++.
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~- 77 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA--GGKAVAYKLDVSDKDQVFSAIDQAAEKFGG- 77 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHHcCC-
Confidence 68999999999999999999999999999999988888777777653 45688899999985 23445555555554
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccccCCCCCchhhHH
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYAA 210 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~a 210 (320)
+|+||||||.... .++.+.+.+++++++++|+.+++.+++.+++.|.+++ +++||++||..+.. +.+....|++
T Consensus 78 -id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~Y~~ 152 (254)
T TIGR02415 78 -FDVMVNNAGVAPI--TPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHE--GNPILSAYSS 152 (254)
T ss_pred -CCEEEECCCcCCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcC--CCCCCcchHH
Confidence 6699999998653 5677889999999999999999999999999998765 48999999999988 6788999999
Q ss_pred HHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccC---CCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHH
Q 020854 211 TKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRS---SFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGV 287 (320)
Q Consensus 211 sKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~---~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l 287 (320)
||+++++|+++++.|+.+.||+|+.|+||+++|++...... ........+..+.....+..++...|++...++.++
T Consensus 153 sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l 232 (254)
T TIGR02415 153 TKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFL 232 (254)
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHhh
Confidence 99999999999999999999999999999999998653110 000011112223334444555666666666666665
Q ss_pred Hh
Q 020854 288 LS 289 (320)
Q Consensus 288 ~~ 289 (320)
++
T Consensus 233 ~~ 234 (254)
T TIGR02415 233 AS 234 (254)
T ss_pred cc
Confidence 54
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.7e-30 Score=229.13 Aligned_cols=229 Identities=28% Similarity=0.322 Sum_probs=185.1
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
++||+++||||++|||++++++|+++|++|++++|+.++.++..+++.+. +.++..+.+|++|. +++.++.+.+.+
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 78 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAK--GGNAQAFACDITDRDSVDTAVAAAEQAL 78 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 35899999999999999999999999999999999998888877777654 34688899999975 234444555545
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
+ ++|++|||+|.... .++.+.+.+++++++++|+.+++++++.+.|.|.+++.++||++||..+.. +.++...|
T Consensus 79 ~--~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~--~~~~~~~Y 152 (250)
T TIGR03206 79 G--PVDVLVNNAGWDKF--GPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARV--GSSGEAVY 152 (250)
T ss_pred C--CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhcc--CCCCCchH
Confidence 4 46699999998643 556778889999999999999999999999999888889999999999987 66788999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHHH
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVL 288 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l~ 288 (320)
+++|+|++.++++++.|+.+.|++++.++||.++|++...... ....+++....+...+..++...+.+...++.+++
T Consensus 153 ~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~ 230 (250)
T TIGR03206 153 AACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICG--GAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFS 230 (250)
T ss_pred HHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhh--ccCChHHHHHHHHhcCCccCCcCHHHHHHHHHHHc
Confidence 9999999999999999999899999999999999998653211 12345555555566666556666666666666654
Q ss_pred h
Q 020854 289 S 289 (320)
Q Consensus 289 ~ 289 (320)
+
T Consensus 231 ~ 231 (250)
T TIGR03206 231 S 231 (250)
T ss_pred C
Confidence 3
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.2e-30 Score=232.06 Aligned_cols=219 Identities=23% Similarity=0.253 Sum_probs=178.0
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCc--HHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDL--DEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~--~~~~~~~~~ 126 (320)
+++++|+++||||+||||.+++++|+++|++|++++|+.++.++..+++.......++..+.+|++|.. .+.++++.+
T Consensus 3 ~~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 82 (276)
T PRK05875 3 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATA 82 (276)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 346689999999999999999999999999999999998888777777765433356888899999852 344455555
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
.+++ +|++|||||.... ..++.+.+.+++++++++|+.+++.+++.+++.|.+++.++|+++||..+.. +.+...
T Consensus 83 ~~~~--~d~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~~ 157 (276)
T PRK05875 83 WHGR--LHGVVHCAGGSET-IGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASN--THRWFG 157 (276)
T ss_pred HcCC--CCEEEECCCcccC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcC--CCCCCc
Confidence 5554 5699999997543 2456778899999999999999999999999999887789999999999877 567788
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcccc-------------CCCCCCCHHHHHHHHHHHhCCC
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKR-------------SSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~-------------~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
.|+++|++++.++++++.|+...||++++|.||+++|++..... +.....+++++++.+...+..+
T Consensus 158 ~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 236 (276)
T PRK05875 158 AYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMFLLSDA 236 (276)
T ss_pred chHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCch
Confidence 99999999999999999999999999999999999999865211 1112346777777777776543
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=2e-30 Score=227.99 Aligned_cols=222 Identities=23% Similarity=0.234 Sum_probs=173.5
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH-HHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP-DKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
.+++|+++||||++|||+++|++|+++|++|+++.|+. +..++..+++... +.++..+.+|+++. +++.++++.+
T Consensus 2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (245)
T PRK12937 2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA--GGRAIAVQADVADAAAVTRLFDAAET 79 (245)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 35689999999999999999999999999998887754 4456666666543 45788999999974 2455566666
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
.+++ +|++|||||.... .++.+.+.+++++++++|+.+++.+++.++|.|. +.++||++||.++.. +.++..
T Consensus 80 ~~~~--id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~~ss~~~~~--~~~~~~ 151 (245)
T PRK12937 80 AFGR--IDVLVNNAGVMPL--GTIADFDLEDFDRTIATNLRGAFVVLREAARHLG--QGGRIINLSTSVIAL--PLPGYG 151 (245)
T ss_pred HcCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhc--cCcEEEEEeeccccC--CCCCCc
Confidence 6664 5699999998653 5677888999999999999999999999999885 358999999998877 678889
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHH
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWG 286 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~ 286 (320)
.|+++|++++.++++++.|+.+.|+++++|+||+++|+|.... ..+ +..+.+.+..+.++...+.+....+.+
T Consensus 152 ~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~------~~~-~~~~~~~~~~~~~~~~~~~d~a~~~~~ 224 (245)
T PRK12937 152 PYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNG------KSA-EQIDQLAGLAPLERLGTPEEIAAAVAF 224 (245)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhccc------CCH-HHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999986421 112 223344444444444455555555444
Q ss_pred HH
Q 020854 287 VL 288 (320)
Q Consensus 287 l~ 288 (320)
++
T Consensus 225 l~ 226 (245)
T PRK12937 225 LA 226 (245)
T ss_pred Hc
Confidence 44
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.9e-30 Score=227.91 Aligned_cols=189 Identities=25% Similarity=0.337 Sum_probs=164.9
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||+++||||+||||.+++++|+++|++|++++|+.++.++..+++. .+.++..+++|++|. +++.++.+.+.
T Consensus 2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~i~~~ 78 (252)
T PRK06138 2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA---AGGRAFARQGDVGSAEAVEALVDFVAAR 78 (252)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh---cCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4569999999999999999999999999999999999988877776665 245688999999985 24455555555
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
++ ++|+||||+|.... .++.+.+.+++++++++|+.+++.+++.++|.|++++.++|+++||..+.. +.++...
T Consensus 79 ~~--~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~--~~~~~~~ 152 (252)
T PRK06138 79 WG--RLDVLVNNAGFGCG--GTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALA--GGRGRAA 152 (252)
T ss_pred cC--CCCEEEECCCCCCC--CCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhcc--CCCCccH
Confidence 55 46699999998654 556778899999999999999999999999999888889999999998887 6677899
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
|+++|++++.++++++.|+.+.|++|++++||.+.|++..
T Consensus 153 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~ 192 (252)
T PRK06138 153 YVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFR 192 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchh
Confidence 9999999999999999999999999999999999999865
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.3e-30 Score=228.79 Aligned_cols=225 Identities=22% Similarity=0.268 Sum_probs=173.9
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||+++||||++|||.++|++|+++|++|++++|+.++++...+++... +.++..+++|++|. +++.++++.+.
T Consensus 9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~Dl~d~~~i~~~~~~~~~~ 86 (259)
T PRK08213 9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEAL--GIDALWIAADVADEADIERLAEETLER 86 (259)
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 366999999999999999999999999999999999998888777777553 44677899999985 23444555555
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHh-hhcCCCcEEEEEcCccccccCC--CCC
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPG-MLKRKKGAIVNIGSGAAIVIPS--DPL 204 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~-l~~~~~g~Iv~vsS~~~~~~~~--~~~ 204 (320)
++ ++|++|||||.... .+..+.+.+.+++++++|+.+++.+++++.|+ |.+++.++||++||..+..+.+ .++
T Consensus 87 ~~--~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~ 162 (259)
T PRK08213 87 FG--HVDILVNNAGATWG--APAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMD 162 (259)
T ss_pred hC--CCCEEEECCCCCCC--CChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccC
Confidence 55 46699999997543 45667888999999999999999999999998 7766778999999988766211 123
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHH
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFI 284 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~ 284 (320)
...|+++|+++++++++++.++.+.||+++.|+||+++|++.... .+...+.+....+..+...+.++..+.
T Consensus 163 ~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~va~~~ 234 (259)
T PRK08213 163 TIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGT--------LERLGEDLLAHTPLGRLGDDEDLKGAA 234 (259)
T ss_pred cchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhh--------hHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 588999999999999999999999999999999999999986421 122233333333333444455555554
Q ss_pred HHHH
Q 020854 285 WGVL 288 (320)
Q Consensus 285 ~~l~ 288 (320)
.+++
T Consensus 235 ~~l~ 238 (259)
T PRK08213 235 LLLA 238 (259)
T ss_pred HHHh
Confidence 4444
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.3e-30 Score=227.20 Aligned_cols=217 Identities=24% Similarity=0.319 Sum_probs=179.9
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC----cHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD----LDEGVERIK 125 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~----~~~~~~~~~ 125 (320)
.++||+++||||++|||.+++++|+++|++|++++|+.+++++..+++.+.. ..++..+.+|+.+. +++.++.+.
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAG-GPQPAIIPLDLLTATPQNYQQLADTIE 87 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcC-CCCceEEEecccCCCHHHHHHHHHHHH
Confidence 3579999999999999999999999999999999999988888877776543 33566677777632 234445555
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCc
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
+.+++ +|+||||||.... ..++.+.+.+.+++.+++|+.|++++++.++|.|.+++.++||++||..+.. +.++.
T Consensus 88 ~~~~~--id~vi~~Ag~~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~--~~~~~ 162 (247)
T PRK08945 88 EQFGR--LDGVLHNAGLLGE-LGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQ--GRANW 162 (247)
T ss_pred HHhCC--CCEEEECCcccCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcC--CCCCC
Confidence 55554 6699999998654 2456788899999999999999999999999999988889999999999887 67788
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc---ccCCCCCCCHHHHHHHHHHHhCCC
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI---KRSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~---~~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
..|++||+++++++++++.++...||++++++||.++|++... ........+|+++++.++..+...
T Consensus 163 ~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (247)
T PRK08945 163 GAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPGEDPQKLKTPEDIMPLYLYLMGDD 232 (247)
T ss_pred cccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCcccccCCCCHHHHHHHHHHHhCcc
Confidence 9999999999999999999999999999999999999998542 122234678999999988877543
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.6e-30 Score=236.53 Aligned_cols=215 Identities=22% Similarity=0.244 Sum_probs=169.3
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||+++||||++|||+++|++|+++|++|++++|+.++.++..+++.+..++..+.++.+|++|. +++.++++.+.
T Consensus 13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 92 (306)
T PRK06197 13 DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA 92 (306)
T ss_pred cCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh
Confidence 4679999999999999999999999999999999999998888777776654456788899999985 23444555555
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC-------
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP------- 200 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~------- 200 (320)
++ ++|+||||||...+ ..+.+.++++..+++|+.|++.+++.++|.|++++.++||++||.++....
T Consensus 93 ~~--~iD~li~nAg~~~~----~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~ 166 (306)
T PRK06197 93 YP--RIDLLINNAGVMYT----PKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDL 166 (306)
T ss_pred CC--CCCEEEECCccccC----CCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCcccc
Confidence 55 46699999998643 234667788999999999999999999999988778999999998754310
Q ss_pred ----CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEE--eccceecCCCccccC----------CCCCCCHHHHHHH
Q 020854 201 ----SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQ--VPLYVATKMASIKRS----------SFFVPSTDVYARA 264 (320)
Q Consensus 201 ----~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v--~PG~v~T~~~~~~~~----------~~~~~~~~~~a~~ 264 (320)
+.++...|++||+++.+|+++++.++++.|++|+++ +||+|+|+|.+.... +.+..++++.+..
T Consensus 167 ~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 246 (306)
T PRK06197 167 QWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRALRPVATVLAPLLAQSPEMGALP 246 (306)
T ss_pred CcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcHHHHHHHHHHHhhhcCCHHHHHHH
Confidence 123467899999999999999999999889888766 699999999763110 1123456666666
Q ss_pred HHHHhC
Q 020854 265 AMRWIG 270 (320)
Q Consensus 265 i~~~l~ 270 (320)
.+....
T Consensus 247 ~~~~~~ 252 (306)
T PRK06197 247 TLRAAT 252 (306)
T ss_pred HHHHhc
Confidence 665543
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.6e-30 Score=222.00 Aligned_cols=187 Identities=16% Similarity=0.163 Sum_probs=161.0
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeE
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG 134 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 134 (320)
+++||||++|||++++++|+++ ++|++++|+.+ .+++|++|. +.++++.+.+++ +|
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-------------------~~~~D~~~~--~~~~~~~~~~~~--id 57 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-------------------DVQVDITDP--ASIRALFEKVGK--VD 57 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-------------------ceEecCCCh--HHHHHHHHhcCC--CC
Confidence 6999999999999999999999 99999999753 368899986 666666666654 66
Q ss_pred EEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHHHHHH
Q 020854 135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAY 214 (320)
Q Consensus 135 ~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaa 214 (320)
++|||||.... .++.+.+.+++++.+++|+.+++++++.+.|.|.+ .|+|+++||..+.. +.++...|++||+|
T Consensus 58 ~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~iss~~~~~--~~~~~~~Y~~sK~a 131 (199)
T PRK07578 58 AVVSAAGKVHF--APLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND--GGSFTLTSGILSDE--PIPGGASAATVNGA 131 (199)
T ss_pred EEEECCCCCCC--CchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCeEEEEcccccCC--CCCCchHHHHHHHH
Confidence 99999997643 56778899999999999999999999999999963 58999999999987 67889999999999
Q ss_pred HHHHHHHHHHHHccCCceEEEEeccceecCCCccc--cCCCCCCCHHHHHHHHHHHhCCC
Q 020854 215 IDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK--RSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 215 l~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~--~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
+++|+++++.|+ ++||+|++|+||+++|++.... .+.....+||++|+.++..+...
T Consensus 132 ~~~~~~~la~e~-~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 190 (199)
T PRK07578 132 LEGFVKAAALEL-PRGIRINVVSPTVLTESLEKYGPFFPGFEPVPAARVALAYVRSVEGA 190 (199)
T ss_pred HHHHHHHHHHHc-cCCeEEEEEcCCcccCchhhhhhcCCCCCCCCHHHHHHHHHHHhccc
Confidence 999999999999 8899999999999999986421 23344679999999998888754
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-30 Score=227.04 Aligned_cols=221 Identities=25% Similarity=0.274 Sum_probs=175.4
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
++||+++||||++|||++++++|+++|++|++++|+.++.++..+++... +..+..+.+|++|. +++.++.+.+.+
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVAD--GGTAIAVQVDVSDPDSAKAMADATVSAF 81 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 56899999999999999999999999999999999988877777776543 33567889999985 244555566666
Q ss_pred cCCCeEEEEEccCCCCC-ccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 129 EGLDVGVLINNVGISYP-YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
+. +|+||||||.... ...++.+.+.+++++++++|+.+++++++.++|.+.+++.|+||++||..+.. +.+.
T Consensus 82 ~~--id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----~~~~ 154 (250)
T PRK07774 82 GG--IDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL-----YSNF 154 (250)
T ss_pred CC--CCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC-----Cccc
Confidence 64 6699999998642 12456678899999999999999999999999999887789999999988754 2467
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHH
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGV 287 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l 287 (320)
|++||++++.++++++.|+...||+++.++||.++|++... ..++...+..++.++..+...+.+....+.++
T Consensus 155 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~ 227 (250)
T PRK07774 155 YGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRT-------VTPKEFVADMVKGIPLSRMGTPEDLVGMCLFL 227 (250)
T ss_pred cHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccc-------cCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998653 13344555555555544444444544444443
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-30 Score=226.71 Aligned_cols=217 Identities=22% Similarity=0.257 Sum_probs=171.0
Q ss_pred EEEECCCCcHHHHHHHHHHHcCCeEEEEeCC-HHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHcCCC
Q 020854 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-PDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEGLD 132 (320)
Q Consensus 56 vlITGas~GIG~ala~~l~~~G~~Vil~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~ 132 (320)
++||||++|||+++|++|+++|++|++++|+ .++.++..+++++. +.++..+++|++|. +...++++.+.++.
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~-- 76 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQ--GGNARLLQFDVADRVACRTLLEADIAEHGA-- 76 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEccCCCHHHHHHHHHHHHHHcCC--
Confidence 5899999999999999999999999998865 55666677777654 34688999999985 23444555555554
Q ss_pred eEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHh-HhhhcCCCcEEEEEcCccccccCCCCCchhhHHH
Q 020854 133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVL-PGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAAT 211 (320)
Q Consensus 133 id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~-~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~as 211 (320)
+|++|||+|.... .++.+.+.++++.++++|+.+++++++.++ |.+.+++.|+||++||.++.. +.++...|+++
T Consensus 77 i~~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~--~~~~~~~Y~~s 152 (239)
T TIGR01831 77 YYGVVLNAGITRD--AAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVM--GNRGQVNYSAA 152 (239)
T ss_pred CCEEEECCCCCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhcc--CCCCCcchHHH
Confidence 5699999998754 456788999999999999999999999875 555556779999999999988 67888999999
Q ss_pred HHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHHHh
Q 020854 212 KAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVLS 289 (320)
Q Consensus 212 Kaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l~~ 289 (320)
|+++.+++++++.|+.++||+|++|+||+++|++.... ++. .+.....++.++...|.+...++.++++
T Consensus 153 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--------~~~-~~~~~~~~~~~~~~~~~~va~~~~~l~~ 221 (239)
T TIGR01831 153 KAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEV--------EHD-LDEALKTVPMNRMGQPAEVASLAGFLMS 221 (239)
T ss_pred HHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhh--------hHH-HHHHHhcCCCCCCCCHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999997631 111 1222334444556666666666666554
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-30 Score=230.37 Aligned_cols=210 Identities=21% Similarity=0.186 Sum_probs=159.6
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeC-CHHHHHHHHHHHHhhcCCceEEEEEEeCCCCc--HHHHHHH----HH
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDL--DEGVERI----KE 126 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~--~~~~~~~----~~ 126 (320)
++++|||||+|||++++++|+++|++|++++| +.+++++..+++.... +.++..+.+|++|.. .+.++++ .+
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~ 80 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARR-PNSAVTCQADLSNSATLFSRCEAIIDACFR 80 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhcc-CCceEEEEccCCCchhhHHHHHHHHHHHHH
Confidence 68999999999999999999999999999865 5677777777775433 335677899999852 2233333 33
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCH-----------HHHHHHHHHHhHHHHHHHHHHhHhhhcC------CCcEEE
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQ-----------VLLKNLIKVNVEGTTKVTQAVLPGMLKR------KKGAIV 189 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~-----------~~~~~~~~~N~~g~~~l~~~~~~~l~~~------~~g~Iv 189 (320)
.++ ++|+||||||...+ .++.+.+. +++.+++++|+.+++.+++.+.|.|..+ ..++|+
T Consensus 81 ~~g--~iD~lv~nAG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv 156 (267)
T TIGR02685 81 AFG--RCDVLVNNASAFYP--TPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIV 156 (267)
T ss_pred ccC--CceEEEECCccCCC--CcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEE
Confidence 344 47799999998653 23333332 3588999999999999999999998643 247899
Q ss_pred EEcCccccccCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc---------ccCC-CCCCCHH
Q 020854 190 NIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI---------KRSS-FFVPSTD 259 (320)
Q Consensus 190 ~vsS~~~~~~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~---------~~~~-~~~~~~~ 259 (320)
+++|..+.. +.++..+|++||+|+++|+++|+.|+.++||+|++|+||+++|+.... ..+. ....+|+
T Consensus 157 ~~~s~~~~~--~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (267)
T TIGR02685 157 NLCDAMTDQ--PLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPFEVQEDYRRKVPLGQREASAE 234 (267)
T ss_pred EehhhhccC--CCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccchhHHHHHHHhCCCCcCCCCHH
Confidence 999999877 678889999999999999999999999999999999999997763211 0011 1235667
Q ss_pred HHHHHHHHHhC
Q 020854 260 VYARAAMRWIG 270 (320)
Q Consensus 260 ~~a~~i~~~l~ 270 (320)
++++.++..+.
T Consensus 235 ~va~~~~~l~~ 245 (267)
T TIGR02685 235 QIADVVIFLVS 245 (267)
T ss_pred HHHHHHHHHhC
Confidence 77777666654
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-30 Score=228.09 Aligned_cols=186 Identities=24% Similarity=0.404 Sum_probs=159.6
Q ss_pred EEEECCCCcHHHHHHHHHHHcCCeEEEEeCC-HHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHcCCC
Q 020854 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-PDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEGLD 132 (320)
Q Consensus 56 vlITGas~GIG~ala~~l~~~G~~Vil~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~ 132 (320)
++||||++|||+++++.|+++|++|++++|+ .+++++..+++........+..+++|++|. +++.++++.+.+++
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~-- 79 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGG-- 79 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCC--
Confidence 7999999999999999999999999999998 777777777776543334566788999985 24455555565664
Q ss_pred eEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHHHH
Q 020854 133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATK 212 (320)
Q Consensus 133 id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asK 212 (320)
+|++|||||.... .++.+.+.+++++++++|+.+++.+++.++|.|.+++.++||++||.++.. +.++...|+++|
T Consensus 80 id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~--~~~~~~~Y~~sK 155 (251)
T PRK07069 80 LSVLVNNAGVGSF--GAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFK--AEPDYTAYNASK 155 (251)
T ss_pred ccEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhcc--CCCCCchhHHHH
Confidence 5699999998654 567788999999999999999999999999999988889999999999987 678889999999
Q ss_pred HHHHHHHHHHHHHHccCC--ceEEEEeccceecCCCc
Q 020854 213 AYIDQFSRSLYVEYRKSG--IDVQCQVPLYVATKMAS 247 (320)
Q Consensus 213 aal~~~~~~l~~el~~~g--i~v~~v~PG~v~T~~~~ 247 (320)
++++.++++++.|+.+++ |+|+.|+||+++|++..
T Consensus 156 ~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~ 192 (251)
T PRK07069 156 AAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVD 192 (251)
T ss_pred HHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchh
Confidence 999999999999998765 99999999999999875
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.7e-30 Score=225.12 Aligned_cols=209 Identities=25% Similarity=0.365 Sum_probs=169.4
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHcCC
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEGL 131 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~ 131 (320)
++++||||+||||.+++++|+++|++|++++|+.+++++..+.+ +.++..+.+|++|. +++.++.+.+.++.
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~- 74 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVRNRAAIEEMLASLPAEWRN- 74 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----ccceEEEEecCCCHHHHHHHHHHHHHHcCC-
Confidence 46899999999999999999999999999999998877665544 34578899999985 23344444444444
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHHH
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAAT 211 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~as 211 (320)
+|++|||||.... ..++.+.+.+++++++++|+.|++.+++.++|.|.+++.++||++||..+.. +.++...|++|
T Consensus 75 -id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~~~Y~~s 150 (248)
T PRK10538 75 -IDVLVNNAGLALG-LEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW--PYAGGNVYGAT 150 (248)
T ss_pred -CCEEEECCCccCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCC--CCCCCchhHHH
Confidence 6699999997542 2456678999999999999999999999999999888889999999998877 66778899999
Q ss_pred HHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc-----c-------cCCCCCCCHHHHHHHHHHHhCCC
Q 020854 212 KAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI-----K-------RSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 212 Kaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~-----~-------~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
|++++++++.++.|+.+.||+|++|.||++.|++... . .......+|+++|+.++..+..+
T Consensus 151 K~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~ 223 (248)
T PRK10538 151 KAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVATLP 223 (248)
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhhccccCCCCHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999998444321 0 01123457888888877776544
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-30 Score=225.43 Aligned_cols=181 Identities=21% Similarity=0.269 Sum_probs=149.7
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeC-CHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
++||+++||||++|||++++++|+++|++|+++++ +.++.++..+++ ....+.+|++|. +.+.++.+.++
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~-------~~~~~~~D~~~~--~~~~~~~~~~~ 74 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET-------GATAVQTDSADR--DAVIDVVRKSG 74 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh-------CCeEEecCCCCH--HHHHHHHHHhC
Confidence 45899999999999999999999999999998876 455555443322 245678899875 44555555554
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhH
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA 209 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~ 209 (320)
++|++|||||.... .+..+.+.+++++++++|+.|++.+++.+++.|. +.|+||++||..+... +.++...|+
T Consensus 75 --~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~g~iv~isS~~~~~~-~~~~~~~Y~ 147 (237)
T PRK12742 75 --ALDILVVNAGIAVF--GDALELDADDIDRLFKINIHAPYHASVEAARQMP--EGGRIIIIGSVNGDRM-PVAGMAAYA 147 (237)
T ss_pred --CCcEEEECCCCCCC--CCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHh--cCCeEEEEeccccccC-CCCCCcchH
Confidence 46699999998653 4466788999999999999999999999999985 3589999999888532 457788999
Q ss_pred HHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 210 asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
++|++++.++++++.|+.++||+|++|+||+++|++..
T Consensus 148 ~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~ 185 (237)
T PRK12742 148 ASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANP 185 (237)
T ss_pred HhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccc
Confidence 99999999999999999999999999999999999864
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=223.62 Aligned_cols=235 Identities=21% Similarity=0.308 Sum_probs=187.7
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCc--HHHHHHHHHHHcC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDL--DEGVERIKEAIEG 130 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~--~~~~~~~~~~~~~ 130 (320)
.|+++||||+||||.+++++|+++|++|++++|+.++++... + ..+..+.+|++|.. .+.++.+.+..+
T Consensus 2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~----~----~~~~~~~~D~~~~~~~~~~~~~i~~~~~- 72 (256)
T PRK08017 2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN----S----LGFTGILLDLDDPESVERAADEVIALTD- 72 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH----h----CCCeEEEeecCCHHHHHHHHHHHHHhcC-
Confidence 378999999999999999999999999999999988765432 1 13567889998751 233333333222
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHH
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA 210 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~a 210 (320)
.++|.+|||+|.... .++.+.+.+++++++++|+.|++++++.++|.+.+.+.++||++||..+.. +.++...|++
T Consensus 73 ~~~~~ii~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~--~~~~~~~Y~~ 148 (256)
T PRK08017 73 NRLYGLFNNAGFGVY--GPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLI--STPGRGAYAA 148 (256)
T ss_pred CCCeEEEECCCCCCc--cchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCccccc--CCCCccHHHH
Confidence 257799999997653 567788999999999999999999999999999888889999999998887 6788899999
Q ss_pred HHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc------cC-------CCCCCCHHHHHHHHHHHhCCCCc--c
Q 020854 211 TKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK------RS-------SFFVPSTDVYARAAMRWIGYEPC--C 275 (320)
Q Consensus 211 sKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~------~~-------~~~~~~~~~~a~~i~~~l~~~~~--~ 275 (320)
||++++.+.++++.++.+.|+++++|.||.++|++.... .+ .....+|+++++.+...+..+.. .
T Consensus 149 sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~ 228 (256)
T PRK08017 149 SKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALESPKPKLR 228 (256)
T ss_pred HHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhCCCCCce
Confidence 999999999999999999999999999999999876521 00 01247899999999999987732 2
Q ss_pred cC-CchHHHHHHHHhhchHHHHHHHH
Q 020854 276 TP-YWPHSFIWGVLSILPEKLIDAGR 300 (320)
Q Consensus 276 ~~-~~~~~~~~~l~~~~P~~~~~~~~ 300 (320)
.+ ........++.+.+|.++.+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~p~~~~~~~~ 254 (256)
T PRK08017 229 YPVTLVTHAVMVLKRLLPGRMMDKIL 254 (256)
T ss_pred eecCcchHHHHHHHHHCCHHHHHHHh
Confidence 22 23455667788899988777643
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-29 Score=224.09 Aligned_cols=212 Identities=22% Similarity=0.308 Sum_probs=166.4
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEe-CCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHc
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIE 129 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~ 129 (320)
.|+++||||++|||.+++++|+++|++|+++. |+.+++++..+++... +.++..+++|++|. +++.++++.+.++
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAA--GGRACVVAGDVANEADVIAMFDAVQSAFG 79 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence 47899999999999999999999999998764 6777777777777553 44688999999975 2344455555555
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC---CcEEEEEcCccccccCCCC-Cc
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK---KGAIVNIGSGAAIVIPSDP-LY 205 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~---~g~Iv~vsS~~~~~~~~~~-~~ 205 (320)
++|++|||||...+ ..++.+.+.++++.++++|+.+++.+++.+++.+..++ .++||++||.++.. +.+ .+
T Consensus 80 --~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~--~~~~~~ 154 (248)
T PRK06947 80 --RLDALVNNAGIVAP-SMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRL--GSPNEY 154 (248)
T ss_pred --CCCEEEECCccCCC-CCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcC--CCCCCC
Confidence 46699999998653 24567889999999999999999999999999887554 57899999998876 334 35
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc------------cCCCCCCCHHHHHHHHHHHhCC
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK------------RSSFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~------------~~~~~~~~~~~~a~~i~~~l~~ 271 (320)
..|++||+++++|+++++.++.+.||+|+.|+||+++|++.... .+.....+||++++.++..+..
T Consensus 155 ~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~l~~~ 232 (248)
T PRK06947 155 VDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRAARLGAQTPLGRAGEADEVAETIVWLLSD 232 (248)
T ss_pred cccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 68999999999999999999999999999999999999986420 0111234566666666655543
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.8e-30 Score=225.57 Aligned_cols=188 Identities=21% Similarity=0.282 Sum_probs=150.8
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCC----HHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN----PDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVE 122 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~----~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~ 122 (320)
..++||+++||||++|||+++|++|+++|++|++++++ .+..++..+++... +.++..+++|++|. +++.++
T Consensus 4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~ 81 (257)
T PRK12744 4 HSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAA--GAKAVAFQADLTTAAAVEKLFD 81 (257)
T ss_pred CCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHh--CCcEEEEecCcCCHHHHHHHHH
Confidence 44679999999999999999999999999997776543 34455555555443 34678899999975 234445
Q ss_pred HHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEE-cCccccccCC
Q 020854 123 RIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNI-GSGAAIVIPS 201 (320)
Q Consensus 123 ~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~v-sS~~~~~~~~ 201 (320)
.+.+.+++ +|++|||||.... .++.+.+.+++++++++|+.+++.+++.+.|.|.. .|+|+++ ||..+. +
T Consensus 82 ~~~~~~~~--id~li~~ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~~~iv~~~ss~~~~---~ 152 (257)
T PRK12744 82 DAKAAFGR--PDIAINTVGKVLK--KPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND--NGKIVTLVTSLLGA---F 152 (257)
T ss_pred HHHHhhCC--CCEEEECCcccCC--CCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc--CCCEEEEecchhcc---c
Confidence 55555554 6699999998654 56778899999999999999999999999998853 4677776 554443 3
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 202 DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 202 ~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
.++...|++||+|+++|+++++.|+.++||+|++++||++.|++..
T Consensus 153 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~ 198 (257)
T PRK12744 153 TPFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFY 198 (257)
T ss_pred CCCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhc
Confidence 4667899999999999999999999999999999999999999864
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.3e-30 Score=224.69 Aligned_cols=187 Identities=28% Similarity=0.440 Sum_probs=160.0
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
++++++++||||++|||++++++|+++|+.|++.+|+.+++++..+++ +.++..+.+|+++. +++.++++.+.
T Consensus 3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (245)
T PRK12936 3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL-----GERVKIFPANLSDRDEVKALGQKAEAD 77 (245)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 356899999999999999999999999999999999988877665443 34577889999975 23444555555
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
+++ +|++|||||...+ .++.+.+.+++++++++|+.+++.+++.+.+.+.+++.++||++||..+.. +.++...
T Consensus 78 ~~~--id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~ 151 (245)
T PRK12936 78 LEG--VDILVNNAGITKD--GLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVT--GNPGQAN 151 (245)
T ss_pred cCC--CCEEEECCCCCCC--CccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCc--CCCCCcc
Confidence 554 6699999998654 456778889999999999999999999999988877789999999998887 6678889
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
|+++|+|+.+++++++.++.+.|+++++++||+++|++..
T Consensus 152 Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~ 191 (245)
T PRK12936 152 YCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTG 191 (245)
T ss_pred hHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhc
Confidence 9999999999999999999999999999999999999864
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.8e-30 Score=226.09 Aligned_cols=231 Identities=23% Similarity=0.287 Sum_probs=180.3
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
++||+++||||+||||++++++|+++|++|++++|++++.++..+++.+. +.++..+++|++|. +++.++++.+.+
T Consensus 5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 82 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA--GGKAIGVAMDVTNEDAVNAGIDKVAERF 82 (262)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhc--CceEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 55899999999999999999999999999999999999888888887654 45688899999985 234445555555
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhh-hcCCCcEEEEEcCccccccCCCCCchh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGM-LKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l-~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
+. +|+||||||.... .++.+.+.++++.++++|+.+++.+++.+++.+ .+.+.++||++||..+.. +.+....
T Consensus 83 ~~--~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~--~~~~~~~ 156 (262)
T PRK13394 83 GS--VDILVSNAGIQIV--NPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHE--ASPLKSA 156 (262)
T ss_pred CC--CCEEEECCccCCC--CchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcC--CCCCCcc
Confidence 54 6699999998653 556678889999999999999999999999999 667789999999998877 5677889
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCC---CCCCCHHHHHHHHHHH-hCCCCcccCCchHHH
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSS---FFVPSTDVYARAAMRW-IGYEPCCTPYWPHSF 283 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~---~~~~~~~~~a~~i~~~-l~~~~~~~~~~~~~~ 283 (320)
|+++|+++.+++++++.++++.||++++|+||.++|++.....+. ......++..+.++.. ....+.+.+.+...+
T Consensus 157 y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a 236 (262)
T PRK13394 157 YVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQT 236 (262)
T ss_pred cHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 999999999999999999999999999999999999986431111 1112333444443321 122345566666666
Q ss_pred HHHHHh
Q 020854 284 IWGVLS 289 (320)
Q Consensus 284 ~~~l~~ 289 (320)
+.++++
T Consensus 237 ~~~l~~ 242 (262)
T PRK13394 237 VLFLSS 242 (262)
T ss_pred HHHHcC
Confidence 555544
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-29 Score=222.43 Aligned_cols=188 Identities=28% Similarity=0.368 Sum_probs=155.4
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEe-CCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHc
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIE 129 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~ 129 (320)
+|+++||||++|||.+++++|+++|++|++++ |+.++.++..+++... +..+..+++|++|. +++.++++.+.++
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQ--GGEALAVAADVADEADVLRLFEAVDRELG 79 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhC--CCcEEEEEeccCCHHHHHHHHHHHHHHhC
Confidence 58999999999999999999999999998887 4556666666666543 34577899999985 2444555555555
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC---CcEEEEEcCccccccCCCCC-c
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK---KGAIVNIGSGAAIVIPSDPL-Y 205 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~---~g~Iv~vsS~~~~~~~~~~~-~ 205 (320)
. +|+||||||...+ ..++.+.+.+++++++++|+.+++.+++.+++.|.++. +|+||++||.++.. +.++ .
T Consensus 80 ~--id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~~ 154 (248)
T PRK06123 80 R--LDALVNNAGILEA-QMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARL--GSPGEY 154 (248)
T ss_pred C--CCEEEECCCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcC--CCCCCc
Confidence 4 5699999998653 24567889999999999999999999999999987542 57999999998877 4454 3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
..|++||+++++|+++++.|+.++||+|++|+||.+.|++..
T Consensus 155 ~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~ 196 (248)
T PRK06123 155 IDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHA 196 (248)
T ss_pred cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhh
Confidence 679999999999999999999999999999999999999754
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-29 Score=223.73 Aligned_cols=189 Identities=26% Similarity=0.395 Sum_probs=165.2
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
+++|+++|||||++||++++++|+++|++|++++|+.++.++..+++... +.++..+.+|++|. +.+.++.+.+.+
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 79 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA--GGKAIGVAMDVTDEEAINAGIDYAVETF 79 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45899999999999999999999999999999999999888887777653 45688899999985 234445555555
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
+ ++|+||||||.... .++.+.+.++++.++++|+.+++.+++.++|.|.+++.++||++||..+.. +.++...|
T Consensus 80 ~--~~d~vi~~a~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~--~~~~~~~y 153 (258)
T PRK12429 80 G--GVDILVNNAGIQHV--APIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLV--GSAGKAAY 153 (258)
T ss_pred C--CCCEEEECCCCCCC--CChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhcc--CCCCcchh
Confidence 5 46699999998654 556788889999999999999999999999999988889999999999987 67889999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
+++|+++.++++.++.|+++.||+|+++.||+++|++..
T Consensus 154 ~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~ 192 (258)
T PRK12429 154 VSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVR 192 (258)
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhh
Confidence 999999999999999999999999999999999999865
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-29 Score=224.38 Aligned_cols=215 Identities=25% Similarity=0.377 Sum_probs=174.2
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+..+|+++||||++|||++++++|+++|++|++++|+.+++++..+++... +.++..+.+|+++. +.+.++++.+.
T Consensus 7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (274)
T PRK07775 7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRAD--GGEAVAFPLDVTDPDSVKSFVAQAEEA 84 (274)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence 355789999999999999999999999999999999988877776666554 34678889999985 13344444444
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
++ ++|++|||||.... .+..+.+.+.+++.+++|+.+++++++.++|.+.+++.|+||++||..+.. +.++.+.
T Consensus 85 ~~--~id~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~--~~~~~~~ 158 (274)
T PRK07775 85 LG--EIEVLVSGAGDTYF--GKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALR--QRPHMGA 158 (274)
T ss_pred cC--CCCEEEECCCcCCC--cccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcC--CCCCcch
Confidence 45 46699999998654 456677889999999999999999999999999887789999999998887 6677889
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcccc-----------------CCCCCCCHHHHHHHHHHHhC
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKR-----------------SSFFVPSTDVYARAAMRWIG 270 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~-----------------~~~~~~~~~~~a~~i~~~l~ 270 (320)
|++||+++++++++++.++.+.||++++|+||+++|++..... .......++++|+.++..+.
T Consensus 159 Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~ 238 (274)
T PRK07775 159 YGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARAITFVAE 238 (274)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHHHHHHHHHHHhc
Confidence 9999999999999999999989999999999999998643210 01224577777777777765
Q ss_pred CC
Q 020854 271 YE 272 (320)
Q Consensus 271 ~~ 272 (320)
.+
T Consensus 239 ~~ 240 (274)
T PRK07775 239 TP 240 (274)
T ss_pred CC
Confidence 44
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=7e-30 Score=222.16 Aligned_cols=205 Identities=19% Similarity=0.272 Sum_probs=167.2
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCe
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV 133 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 133 (320)
|+++||||++|||.+++++|+++|++|++++|+.++.++.. + ...+....+|++|. +.++++.+.+...++
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~----~---~~~~~~~~~D~~d~--~~~~~~~~~~~~~~i 72 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ----A---LPGVHIEKLDMNDP--ASLDQLLQRLQGQRF 72 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH----h---ccccceEEcCCCCH--HHHHHHHHHhhcCCC
Confidence 68999999999999999999999999999999987654432 1 12456778899886 566666666654468
Q ss_pred EEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccccc-CCCCCchhhHHHH
Q 020854 134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI-PSDPLYSVYAATK 212 (320)
Q Consensus 134 d~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~-~~~~~~~~Y~asK 212 (320)
|+||||||...+...++.+.+.+++++.+++|+.+++.+++.++|.+.+ +.++|+++||..+... ++......|+++|
T Consensus 73 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK 151 (225)
T PRK08177 73 DLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRP-GQGVLAFMSSQLGSVELPDGGEMPLYKASK 151 (225)
T ss_pred CEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhh-cCCEEEEEccCccccccCCCCCccchHHHH
Confidence 8999999987543355778899999999999999999999999998864 3589999999877652 1234567899999
Q ss_pred HHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCC
Q 020854 213 AYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 213 aal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
++++.|+++++.|+.++||+|++|+||+++|++.... ...++++.++.+++.+...
T Consensus 152 ~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~~----~~~~~~~~~~~~~~~~~~~ 207 (225)
T PRK08177 152 AALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGDN----APLDVETSVKGLVEQIEAA 207 (225)
T ss_pred HHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCCCC----CCCCHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999997642 2357788888888876544
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.4e-30 Score=222.59 Aligned_cols=205 Identities=16% Similarity=0.190 Sum_probs=165.1
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G--~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
++++|||||+|||+++|++|+++| ..|++..|+.... ....++.++++|+++. +.++++.+.+++
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~----------~~~~~~~~~~~Dls~~--~~~~~~~~~~~~- 67 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD----------FQHDNVQWHALDVTDE--AEIKQLSEQFTQ- 67 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc----------cccCceEEEEecCCCH--HHHHHHHHhcCC-
Confidence 479999999999999999999985 5666666754321 1145678899999987 566667777765
Q ss_pred CeEEEEEccCCCCCc----cccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccccc-CCCCCch
Q 020854 132 DVGVLINNVGISYPY----ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI-PSDPLYS 206 (320)
Q Consensus 132 ~id~lI~nAG~~~~~----~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~-~~~~~~~ 206 (320)
+|+||||||..... ..++.+.+.+.+++.+++|+.+++.+++.++|.|.+++.++|+++||..+... .+.+++.
T Consensus 68 -id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~ 146 (235)
T PRK09009 68 -LDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWY 146 (235)
T ss_pred -CCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcc
Confidence 55999999987531 23567888899999999999999999999999998777789999998766431 1245678
Q ss_pred hhHHHHHHHHHHHHHHHHHHcc--CCceEEEEeccceecCCCccc---cCCCCCCCHHHHHHHHHHHhCCC
Q 020854 207 VYAATKAYIDQFSRSLYVEYRK--SGIDVQCQVPLYVATKMASIK---RSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~--~gi~v~~v~PG~v~T~~~~~~---~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
.|++||+++++|+++|+.|+++ .||+|++|+||+++|+|.... .+...+.+||++|+.++..+..+
T Consensus 147 ~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~ 217 (235)
T PRK09009 147 SYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQQNVPKGKLFTPEYVAQCLLGIIANA 217 (235)
T ss_pred hhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchhhccccCCCCCHHHHHHHHHHHHHcC
Confidence 9999999999999999999986 699999999999999997642 22233579999999999988765
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-29 Score=223.23 Aligned_cols=209 Identities=21% Similarity=0.294 Sum_probs=170.2
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHcC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEG 130 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~ 130 (320)
.|++|||||+||||++++++|+++|++|++++|+.+.+++..++. ...+..+.+|++|. +++.++++.+.++.
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 76 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY-----GDRLWVLQLDVTDSAAVRAVVDRAFAALGR 76 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999999999999999999999987766554432 23578889999986 23344444444554
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHH
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA 210 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~a 210 (320)
+|+||||||.... .+..+.+.+++++.+++|+.|++++++.++|+|++++.++||++||..+.. +.|+.+.|++
T Consensus 77 --id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~Y~~ 150 (276)
T PRK06482 77 --IDVVVSNAGYGLF--GAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQI--AYPGFSLYHA 150 (276)
T ss_pred --CCEEEECCCCCCC--cccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCccccc--CCCCCchhHH
Confidence 5699999998764 556778889999999999999999999999999888889999999998876 6678899999
Q ss_pred HHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCC-----------------------CCCCCHHHHHHHHHH
Q 020854 211 TKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSS-----------------------FFVPSTDVYARAAMR 267 (320)
Q Consensus 211 sKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~-----------------------~~~~~~~~~a~~i~~ 267 (320)
||++++.++++++.++.+.||+++.++||.+.|++....... ....+++++++.++.
T Consensus 151 sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~a~~~ 230 (276)
T PRK06482 151 TKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAIPGDPQKMVQAMIA 230 (276)
T ss_pred HHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCCCCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999885421100 011467778887777
Q ss_pred HhCCC
Q 020854 268 WIGYE 272 (320)
Q Consensus 268 ~l~~~ 272 (320)
.+..+
T Consensus 231 ~~~~~ 235 (276)
T PRK06482 231 SADQT 235 (276)
T ss_pred HHcCC
Confidence 77543
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-29 Score=222.47 Aligned_cols=189 Identities=23% Similarity=0.383 Sum_probs=159.4
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEE-eCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++++++|||||||||.++|++|+++|++|++. +|+.++.++..+++... +..+..+++|++|. +.+.++++.+.
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~~~ 81 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESN--GGKAFLIEADLNSIDGVKKLVEQLKNE 81 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCcCCHHHHHHHHHHHHHH
Confidence 458999999999999999999999999998775 78888777777666543 34678899999985 23444555555
Q ss_pred Hc----CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCC
Q 020854 128 IE----GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP 203 (320)
Q Consensus 128 ~~----~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~ 203 (320)
++ ..++|++|||||...+ .++.+.+.+.++.++++|+.+++++++.++|.+.+ .+++|++||..+.. +.+
T Consensus 82 ~~~~~~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~v~~sS~~~~~--~~~ 155 (254)
T PRK12746 82 LQIRVGTSEIDILVNNAGIGTQ--GTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA--EGRVINISSAEVRL--GFT 155 (254)
T ss_pred hccccCCCCccEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECCHHhcC--CCC
Confidence 52 1357899999998654 56778899999999999999999999999998854 47999999998877 678
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 204 ~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
+...|++||++++.++++++.|+.+.|++|++++||+++|++..
T Consensus 156 ~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~ 199 (254)
T PRK12746 156 GSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINA 199 (254)
T ss_pred CCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchh
Confidence 88999999999999999999999999999999999999999865
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=7e-29 Score=220.22 Aligned_cols=213 Identities=18% Similarity=0.173 Sum_probs=170.4
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeC-CHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
..+|+++||||++|||++++++|+++|++|+++++ +.+.+++..+++... +.++..+.+|++|. +.+.++++.+.
T Consensus 7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 84 (258)
T PRK09134 7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL--GRRAVALQADLADEAEVRALVARASAA 84 (258)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999988766 456666666666543 45688899999985 23344455555
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
++ ++|+||||||.... .++.+.+.+++++++++|+.|++.+++.+.+.+.++..++||+++|..+.. +.|+...
T Consensus 85 ~~--~iD~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~--~~p~~~~ 158 (258)
T PRK09134 85 LG--PITLLVNNASLFEY--DSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWN--LNPDFLS 158 (258)
T ss_pred cC--CCCEEEECCcCCCC--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcC--CCCCchH
Confidence 55 46699999998654 457788999999999999999999999999999877789999999987766 5677789
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc---------ccCCCCCCCHHHHHHHHHHHhCCC
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI---------KRSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~---------~~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
|++||+++++++++++.|+.+. |+|++|+||++.|+.... ..+.....+++++|+.++..+..+
T Consensus 159 Y~~sK~a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~ 231 (258)
T PRK09134 159 YTLSKAALWTATRTLAQALAPR-IRVNAIGPGPTLPSGRQSPEDFARQHAATPLGRGSTPEEIAAAVRYLLDAP 231 (258)
T ss_pred HHHHHHHHHHHHHHHHHHhcCC-cEEEEeecccccCCcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcCC
Confidence 9999999999999999999765 999999999998865321 011122457888888877777643
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-29 Score=222.72 Aligned_cols=182 Identities=23% Similarity=0.333 Sum_probs=156.9
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
+++++|+++||||++|||++++++|+++|++|++++|+. +... +..+..+++|+++. +++.++++.+
T Consensus 4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 72 (252)
T PRK08220 4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQE--DYPFATFVLDVSDAAAVAQVCQRLLA 72 (252)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhc--CCceEEEEecCCCHHHHHHHHHHHHH
Confidence 446799999999999999999999999999999999986 1111 44678899999985 2444555555
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
.++. +|++|||+|.... .++.+.+.+++++.+++|+.+++.+++.+.|.|++++.|+||++||..+.. +.++.+
T Consensus 73 ~~~~--id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~--~~~~~~ 146 (252)
T PRK08220 73 ETGP--LDVLVNAAGILRM--GATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHV--PRIGMA 146 (252)
T ss_pred HcCC--CCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhcc--CCCCCc
Confidence 5554 5699999998654 567788999999999999999999999999999888889999999998877 667789
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
.|++||+++++++++++.|+++.||+|+++.||.++|++..
T Consensus 147 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~ 187 (252)
T PRK08220 147 AYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQR 187 (252)
T ss_pred hhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhh
Confidence 99999999999999999999999999999999999999854
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-29 Score=220.24 Aligned_cols=186 Identities=28% Similarity=0.389 Sum_probs=156.5
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHH-HHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHcC
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD-KLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEG 130 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~ 130 (320)
|+++||||++|||.++|++|+++|++|++++|+.. ..++..+.... .+.++..+++|++|. +++.++.+.+.++.
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 80 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGF--TEDQVRLKELDVTDTEECAEALAEIEEEEGP 80 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhc--cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 68999999999999999999999999999999854 22222222222 134688899999985 23445555555554
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHH
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA 210 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~a 210 (320)
+|++|||+|.... .++.+.+.+++++++++|+.+++++++.++|.+.+++.++||++||..+.. +.++...|++
T Consensus 81 --id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~--~~~~~~~Y~~ 154 (245)
T PRK12824 81 --VDILVNNAGITRD--SVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLK--GQFGQTNYSA 154 (245)
T ss_pred --CCEEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhcc--CCCCChHHHH
Confidence 6699999998654 557788999999999999999999999999999888889999999999887 6788899999
Q ss_pred HHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 211 TKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 211 sKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
||+|+++++++++.|+.+.||+++.++||+++|++..
T Consensus 155 sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~ 191 (245)
T PRK12824 155 AKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVE 191 (245)
T ss_pred HHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchh
Confidence 9999999999999999999999999999999999865
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=224.10 Aligned_cols=186 Identities=22% Similarity=0.349 Sum_probs=151.9
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH-HHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHcC
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP-DKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEG 130 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~ 130 (320)
|+++||||+||||++++++|+++|++|++++|+. +.+++..+ .. +.+++.+++|+++. .+..++++.+.++.
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~----~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 76 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAE----QY-NSNLTFHSLDLQDVHELETNFNEILSSIQE 76 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHh----cc-CCceEEEEecCCCHHHHHHHHHHHHHhcCc
Confidence 6899999999999999999999999999999987 33333222 11 34678899999985 23444444444443
Q ss_pred C--CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC-CCcEEEEEcCccccccCCCCCchh
Q 020854 131 L--DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 131 ~--~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
. +.+++|+|||...+ ..++.+.+.+++++.+++|+.+++.+++.++|.+.+. ..++||++||..+.. +.++...
T Consensus 77 ~~~~~~~~v~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~ 153 (251)
T PRK06924 77 DNVSSIHLINNAGMVAP-IKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKN--PYFGWSA 153 (251)
T ss_pred ccCCceEEEEcceeccc-CcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcC--CCCCcHH
Confidence 2 33389999998654 3467788999999999999999999999999999875 368999999998877 6788999
Q ss_pred hHHHHHHHHHHHHHHHHHHc--cCCceEEEEeccceecCCCc
Q 020854 208 YAATKAYIDQFSRSLYVEYR--KSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~--~~gi~v~~v~PG~v~T~~~~ 247 (320)
|+++|+|+++++++++.|++ +.||+|++|+||+++|++..
T Consensus 154 Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~ 195 (251)
T PRK06924 154 YCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQA 195 (251)
T ss_pred HhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHH
Confidence 99999999999999999975 56899999999999999854
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.8e-29 Score=220.77 Aligned_cols=188 Identities=28% Similarity=0.343 Sum_probs=161.7
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLN-LVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~-Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++|+++||||++|||+.++++|+++|++ |++++|+.++.+...+++.+. +..+..+.+|+++. +.+.++.+.+.
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEAL--GAKAVFVQADLSDVEDCRRVVAAADEA 81 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 56899999999999999999999999998 999999988887777777543 45688889999975 23444555555
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccccCCCCCch
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
++. +|++|||||.... .++.+.+.+.++.++++|+.+++.+++.++|.|.+++ .|+||++||..+.. +.++..
T Consensus 82 ~g~--id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~--~~~~~~ 155 (260)
T PRK06198 82 FGR--LDALVNAAGLTDR--GTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHG--GQPFLA 155 (260)
T ss_pred hCC--CCEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCccccc--CCCCcc
Confidence 554 6699999998654 5567889999999999999999999999999997654 58999999999877 667788
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCC
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMA 246 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~ 246 (320)
.|+++|+++++++++++.|+.+.||+|++|+||+++|++.
T Consensus 156 ~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~ 195 (260)
T PRK06198 156 AYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGE 195 (260)
T ss_pred hhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcch
Confidence 9999999999999999999999999999999999999974
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-29 Score=220.25 Aligned_cols=212 Identities=23% Similarity=0.253 Sum_probs=169.3
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH-HHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHc
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP-DKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIE 129 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~ 129 (320)
.|+++||||++|||.+++++|+++|++|++++|+. +..++..+.++.. +.++.++.+|++|. +.+.++++.+.++
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL--GVEVIFFPADVADLSAHEAMLDAAQAAWG 79 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 48999999999999999999999999999999864 4455555555443 34688899999985 2344555555555
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC------CcEEEEEcCccccccCCCC
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK------KGAIVNIGSGAAIVIPSDP 203 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~------~g~Iv~vsS~~~~~~~~~~ 203 (320)
. +|++|||||...+...++.+.+.+.+++.+++|+.+++.+++.+.+.|.+++ .++||++||..+.. +.+
T Consensus 80 ~--id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~ 155 (256)
T PRK12745 80 R--IDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIM--VSP 155 (256)
T ss_pred C--CCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhcc--CCC
Confidence 4 6699999998654335677889999999999999999999999999998664 35799999999987 667
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc------------cCCCCCCCHHHHHHHHHHHhC
Q 020854 204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK------------RSSFFVPSTDVYARAAMRWIG 270 (320)
Q Consensus 204 ~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~------------~~~~~~~~~~~~a~~i~~~l~ 270 (320)
+...|++||+++++++++++.|+.++|++|++++||.++|++.... .+...+..|+++++.+...+.
T Consensus 156 ~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~i~~l~~ 234 (256)
T PRK12745 156 NRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYDALIAKGLVPMPRWGEPEDVARAVAALAS 234 (256)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhHHhhhhhcCCCcCCCcCHHHHHHHHHHHhC
Confidence 7889999999999999999999999999999999999999986421 111124467777776665554
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.7e-29 Score=219.07 Aligned_cols=190 Identities=24% Similarity=0.339 Sum_probs=157.6
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
++|++++||||++|||.++++.|+++|++|++++|+.+++++..+++... +.++..+++|+++. +++.++.+.+.+
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGAL--GTEVRGYAANVTDEEDVEATFAQIAEDF 80 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 56999999999999999999999999999999999998888887777654 45688899999975 233344444444
Q ss_pred cCCCeEEEEEccCCCCCcc------ccc-cCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC-CCcEEEEEcCccccccC
Q 020854 129 EGLDVGVLINNVGISYPYA------RFF-HEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSGAAIVIP 200 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~------~~~-~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-~~g~Iv~vsS~~~~~~~ 200 (320)
+ ++|++|||||...... ..+ .+.+.+.++.++++|+.|++++.+.++|.+.++ ..+.||++||... .
T Consensus 81 ~--~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~-~-- 155 (253)
T PRK08217 81 G--QLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIAR-A-- 155 (253)
T ss_pred C--CCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccc-c--
Confidence 4 4669999999754310 112 577889999999999999999999999999766 4678999999754 3
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 201 SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 201 ~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
+.++.+.|++||+|+++++++|+.|+.++||++++++||+++|++..
T Consensus 156 ~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~ 202 (253)
T PRK08217 156 GNMGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTA 202 (253)
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccc
Confidence 45678899999999999999999999999999999999999999875
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.8e-29 Score=218.15 Aligned_cols=186 Identities=28% Similarity=0.344 Sum_probs=158.8
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeC-CHHHHHHHHHHHHhhcCCceEEEEEEeCCCCc--HHHHHHHHHHHcC
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDL--DEGVERIKEAIEG 130 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~--~~~~~~~~~~~~~ 130 (320)
|+++||||++|||++++++|+++|++|++++| +.+..++..+++... +.++..+.+|++|.. ++.++.+.+.++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~- 77 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGAL--GFDFRVVEGDVSSFESCKAAVAKVEAELG- 77 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHcC-
Confidence 68999999999999999999999999999988 666666655555433 346888999999852 344455555555
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHH
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA 210 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~a 210 (320)
++|+||||||...+ .++.+.+.+++++++++|+.+++.+++.++|.|.+++.++||++||..+.. +.++...|++
T Consensus 78 -~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~--~~~~~~~y~~ 152 (242)
T TIGR01829 78 -PIDVLVNNAGITRD--ATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQK--GQFGQTNYSA 152 (242)
T ss_pred -CCcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcC--CCCCcchhHH
Confidence 46699999998654 457788999999999999999999999999999888889999999998877 6778899999
Q ss_pred HHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 211 TKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 211 sKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
+|+++..++++++.|+.+.|++++.+.||+++|++..
T Consensus 153 sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~ 189 (242)
T TIGR01829 153 AKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVM 189 (242)
T ss_pred HHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCcccc
Confidence 9999999999999999999999999999999999865
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-29 Score=248.19 Aligned_cols=235 Identities=22% Similarity=0.224 Sum_probs=183.0
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
..++||+++||||++|||++++++|+++|++|++++|+.+++++..+++.+..+...+..+.+|++|. +++.++++.+
T Consensus 410 ~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~ 489 (676)
T TIGR02632 410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVAL 489 (676)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 44679999999999999999999999999999999999988888877776554445678899999985 3455556666
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccccCCCCCc
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
.+++ +|+||||||.... .++.+.+.++|+..+++|+.+++.+++.++|.|.+++ +|+||++||..+.. +.++.
T Consensus 490 ~~g~--iDilV~nAG~~~~--~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~--~~~~~ 563 (676)
T TIGR02632 490 AYGG--VDIVVNNAGIATS--SPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVY--AGKNA 563 (676)
T ss_pred hcCC--CcEEEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcC--CCCCC
Confidence 6665 5699999998653 5677889999999999999999999999999998765 67999999999887 67888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceec--CCCcccc----CCCCCCCHHHHHHHHHHHhCCCCcccCCc
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVAT--KMASIKR----SSFFVPSTDVYARAAMRWIGYEPCCTPYW 279 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T--~~~~~~~----~~~~~~~~~~~a~~i~~~l~~~~~~~~~~ 279 (320)
..|++||+++++++++++.|+.+.||+||+|+||.|.| +++.... ......++++..+........++.+.|.+
T Consensus 564 ~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~peD 643 (676)
T TIGR02632 564 SAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPAD 643 (676)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCHHH
Confidence 99999999999999999999999999999999999965 3432100 00011223333232333333345667777
Q ss_pred hHHHHHHHHh
Q 020854 280 PHSFIWGVLS 289 (320)
Q Consensus 280 ~~~~~~~l~~ 289 (320)
+..++.++++
T Consensus 644 VA~av~~L~s 653 (676)
T TIGR02632 644 IAEAVFFLAS 653 (676)
T ss_pred HHHHHHHHhC
Confidence 7777666653
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-29 Score=220.28 Aligned_cols=188 Identities=32% Similarity=0.445 Sum_probs=155.2
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHH--HHHHHHHHHhhcCC-ceEEEEEEeCCC-C--cHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK--LKDVSDSIQAKYAK-TQIKSVVVDFSG-D--LDEGVERI 124 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~--~~~~~~~l~~~~~~-~~~~~~~~D~~~-~--~~~~~~~~ 124 (320)
+.+|+++||||++|||+++|++|+++|++|+++.|+.+. .+...+... ..+ ..+....+|+++ . ++..++++
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~Dvs~~~~~v~~~~~~~ 80 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK--EAGGGRAAAVAADVSDDEESVEALVAAA 80 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH--hcCCCcEEEEEecCCCCHHHHHHHHHHH
Confidence 568999999999999999999999999999988887654 333333333 112 368888899997 4 24566777
Q ss_pred HHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCC
Q 020854 125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL 204 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~ 204 (320)
.+.+++ +|++|||||..... .++.+.+.+++++++++|+.|++.+++.+.|.+.++ +||++||..+. .+ .+.
T Consensus 81 ~~~~g~--id~lvnnAg~~~~~-~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~Iv~isS~~~~-~~-~~~ 152 (251)
T COG1028 81 EEEFGR--IDILVNNAGIAGPD-APLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---RIVNISSVAGL-GG-PPG 152 (251)
T ss_pred HHHcCC--CCEEEECCCCCCCC-CChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC---eEEEECCchhc-CC-CCC
Confidence 777776 44999999987531 367889999999999999999999999888888733 99999999997 42 222
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI 248 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~ 248 (320)
.++|++||+|+.+|+++++.|+++.||+|++|+||+++|++...
T Consensus 153 ~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~ 196 (251)
T COG1028 153 QAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAA 196 (251)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhh
Confidence 58999999999999999999999999999999999999999874
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-28 Score=216.88 Aligned_cols=183 Identities=24% Similarity=0.360 Sum_probs=157.9
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
+|+++|||||||||++++++|+++|++|++++|+.++.++..+..... +..+..+.+|++|. +.+.+. +.. +
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~--~~~~~~---~~~-~ 73 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR--GLALRVEKLDLTDA--IDRAQA---AEW-D 73 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcceEEEeeCCCH--HHHHHH---hcC-C
Confidence 689999999999999999999999999999999988777766655443 34578889999986 333332 222 5
Q ss_pred eEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHHHH
Q 020854 133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATK 212 (320)
Q Consensus 133 id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asK 212 (320)
+|+||||||.... .++.+.+.+.++..+++|+.+++.+++.++|.+.+++.++||++||..+.. +.++...|++||
T Consensus 74 id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~--~~~~~~~Y~~sK 149 (257)
T PRK09291 74 VDVLLNNAGIGEA--GAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLI--TGPFTGAYCASK 149 (257)
T ss_pred CCEEEECCCcCCC--cCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhcc--CCCCcchhHHHH
Confidence 7799999998754 577888999999999999999999999999999888789999999998877 567788999999
Q ss_pred HHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 213 AYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 213 aal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
++++.++++++.++.+.||++++|+||++.|++..
T Consensus 150 ~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~ 184 (257)
T PRK09291 150 HALEAIAEAMHAELKPFGIQVATVNPGPYLTGFND 184 (257)
T ss_pred HHHHHHHHHHHHHHHhcCcEEEEEecCcccccchh
Confidence 99999999999999999999999999999998754
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-28 Score=216.32 Aligned_cols=191 Identities=31% Similarity=0.459 Sum_probs=164.9
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEE-eCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++++|+++||||++|||.+++++|+++|++|+++ +|+.++.++..+++... +.++..+.+|++|. +.+.++.+.+
T Consensus 2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (247)
T PRK05565 2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE--GGDAIAVKADVSSEEDVENLVEQIVE 79 (247)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 3568999999999999999999999999999999 99988887777777553 45688899999985 2344455555
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
.++. +|++|||+|.... .++.+.+.+++++.+++|+.+++.+++.+.|.+.+++.+++|++||..+.. +.+...
T Consensus 80 ~~~~--id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~--~~~~~~ 153 (247)
T PRK05565 80 KFGK--IDILVNNAGISNF--GLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLI--GASCEV 153 (247)
T ss_pred HhCC--CCEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhcc--CCCCcc
Confidence 5554 6699999998743 567788999999999999999999999999999888889999999998887 667788
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI 248 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~ 248 (320)
.|+++|++++.++++++.++.+.|+++++++||+++|++.+.
T Consensus 154 ~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~ 195 (247)
T PRK05565 154 LYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSS 195 (247)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccc
Confidence 999999999999999999999999999999999999998653
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-28 Score=227.96 Aligned_cols=222 Identities=16% Similarity=0.160 Sum_probs=170.9
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
++||+++|||||||||++++++|+++|++|++++|+.+++++.. ... ...+..+.+|++|. +++.+.+++
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~---~~~--~~~v~~v~~Dvsd~-----~~v~~~l~~ 245 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEI---NGE--DLPVKTLHWQVGQE-----AALAELLEK 245 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---hhc--CCCeEEEEeeCCCH-----HHHHHHhCC
Confidence 57899999999999999999999999999999999987654322 111 23466788999876 334445554
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCC----cEEEEEcCccccccCCCCCch
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKK----GAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~----g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
+|++|||||.... .+.+.+++++++++|+.|++.+++.++|.|++++. +.+|++|| ++.. .+..+
T Consensus 246 --IDiLInnAGi~~~-----~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~~~---~~~~~ 314 (406)
T PRK07424 246 --VDILIINHGINVH-----GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AEVN---PAFSP 314 (406)
T ss_pred --CCEEEECCCcCCC-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cccc---CCCch
Confidence 6699999997532 36788999999999999999999999999987642 45666665 4332 24567
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCC-Ccc-cCCchHHHH
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYE-PCC-TPYWPHSFI 284 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~-~~~-~~~~~~~~~ 284 (320)
.|++||+|+.+++. ++++. .++.|..+.||.++|++.. ...++||++|+.++.++.++ +.+ .+.++...+
T Consensus 315 ~Y~ASKaAl~~l~~-l~~~~--~~~~I~~i~~gp~~t~~~~-----~~~~spe~vA~~il~~i~~~~~~i~v~~~~~~~~ 386 (406)
T PRK07424 315 LYELSKRALGDLVT-LRRLD--APCVVRKLILGPFKSNLNP-----IGVMSADWVAKQILKLAKRDFRNIIVTINPLTYL 386 (406)
T ss_pred HHHHHHHHHHHHHH-HHHhC--CCCceEEEEeCCCcCCCCc-----CCCCCHHHHHHHHHHHHHCCCCEEEeCchHHHHH
Confidence 89999999999984 55543 4677888899999999853 23579999999999999988 333 444566677
Q ss_pred HHHHhhchHHHHHHHHH
Q 020854 285 WGVLSILPEKLIDAGRL 301 (320)
Q Consensus 285 ~~l~~~~P~~~~~~~~~ 301 (320)
.+..+.+|.+++.++..
T Consensus 387 ~~~i~~~~~~~~~~l~~ 403 (406)
T PRK07424 387 LFPIKEFSVSLYFKLFS 403 (406)
T ss_pred HHHHHHhhHHHHHHHhc
Confidence 77788899988887653
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-28 Score=214.29 Aligned_cols=213 Identities=25% Similarity=0.335 Sum_probs=177.3
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
+.+++++||||+|+||.+++++|+++|++|++++|+.+++++..+++.+. ..++.+++|++|. +.+.++++.+.+
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK---GNVLGLAADVRDEADVQRAVDAIVAAF 80 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc---CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 45899999999999999999999999999999999998888877777542 4688899999875 233444444444
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
+ ++|++|||+|.... .++.+.+.+++++++++|+.+++.+++++++.+ .++.++||++||.++.. +.++...|
T Consensus 81 ~--~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~iv~~ss~~~~~--~~~~~~~y 153 (237)
T PRK07326 81 G--GLDVLIANAGVGHF--APVEELTPEEWRLVIDTNLTGAFYTIKAAVPAL-KRGGGYIINISSLAGTN--FFAGGAAY 153 (237)
T ss_pred C--CCCEEEECCCCCCC--CchhhCCHHHHHHHHhhccHHHHHHHHHHHHHH-HHCCeEEEEECChhhcc--CCCCCchH
Confidence 4 46699999997653 557788999999999999999999999999988 44568999999998876 56778899
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCC--CCCCCHHHHHHHHHHHhCCCC
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSS--FFVPSTDVYARAAMRWIGYEP 273 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~--~~~~~~~~~a~~i~~~l~~~~ 273 (320)
+++|+++.++++.++.|++..|+++++|+||.+.|++....... ....+++++++.++..+..+.
T Consensus 154 ~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~d~a~~~~~~l~~~~ 220 (237)
T PRK07326 154 NASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPSEKDAWKIQPEDIAQLVLDLLKMPP 220 (237)
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccccchhhhccCCHHHHHHHHHHHHhCCc
Confidence 99999999999999999999999999999999999986542211 224789999999999987663
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-29 Score=219.75 Aligned_cols=183 Identities=26% Similarity=0.337 Sum_probs=151.9
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCc--HHHHHH-HHHHHcC
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDL--DEGVER-IKEAIEG 130 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~--~~~~~~-~~~~~~~ 130 (320)
++++|||||||||++++++|+++|++|++++|+.++. . ... .+.++..+.+|++|.. ++.+++ +.+.++.
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~----~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 74 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L----AAA-AGERLAEVELDLSDAAAAAAWLAGDLLAAFVD 74 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h----hhc-cCCeEEEEEeccCCHHHHHHHHHHHHHHHhcc
Confidence 3699999999999999999999999999999986541 1 111 2456888999999851 222322 3334443
Q ss_pred -CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhH
Q 020854 131 -LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA 209 (320)
Q Consensus 131 -~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~ 209 (320)
.++|++|||||...+ ..++.+.+.+++++.+++|+.|++.+++.+.|.|.+++.++||++||..+.. +.+++..|+
T Consensus 75 ~~~~~~~v~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~~~Y~ 151 (243)
T PRK07023 75 GASRVLLINNAGTVEP-IGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARN--AYAGWSVYC 151 (243)
T ss_pred CCCceEEEEcCcccCC-CCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcC--CCCCchHHH
Confidence 358899999998653 3456778999999999999999999999999999887789999999999887 678899999
Q ss_pred HHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 210 asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
++|+++++++++++.+ .+.||++++|+||+++|++..
T Consensus 152 ~sK~a~~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~ 188 (243)
T PRK07023 152 ATKAALDHHARAVALD-ANRALRIVSLAPGVVDTGMQA 188 (243)
T ss_pred HHHHHHHHHHHHHHhc-CCCCcEEEEecCCccccHHHH
Confidence 9999999999999999 788999999999999999854
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-28 Score=215.33 Aligned_cols=212 Identities=26% Similarity=0.322 Sum_probs=168.8
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeC----CHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR----NPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERI 124 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r----~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~ 124 (320)
+++++++||||+||||+++|++|+++|++|++++| +.+..++..+++... +.++..+.+|++|. +++.++.+
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~ 81 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAA--GGKALGLAFDVRDFAATRAALDAG 81 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHH
Confidence 45899999999999999999999999999999765 445555555555443 34688899999985 23344444
Q ss_pred HHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHh-HhhhcCCCcEEEEEcCccccccCCCC
Q 020854 125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVL-PGMLKRKKGAIVNIGSGAAIVIPSDP 203 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~-~~l~~~~~g~Iv~vsS~~~~~~~~~~ 203 (320)
.+..+ ++|++|||||.... .++.+.+.+++++.+++|+.+++.+++.+. +.+.+++.+++|++||..+.. +.+
T Consensus 82 ~~~~~--~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~ 155 (249)
T PRK12827 82 VEEFG--RLDILVNNAGIATD--AAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVR--GNR 155 (249)
T ss_pred HHHhC--CCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcC--CCC
Confidence 44445 36699999998764 567788899999999999999999999999 666666778999999999987 667
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcccc---------CCCCCCCHHHHHHHHHHHhC
Q 020854 204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKR---------SSFFVPSTDVYARAAMRWIG 270 (320)
Q Consensus 204 ~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~---------~~~~~~~~~~~a~~i~~~l~ 270 (320)
+...|+++|++++.++++++.|+++.|+++++++||+++|++..... +.....+++++++.++..+.
T Consensus 156 ~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~ 231 (249)
T PRK12827 156 GQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPTEHLLNPVPVQRLGEPDEVAALVAFLVS 231 (249)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchHHHHHhhCCCcCCcCHHHHHHHHHHHcC
Confidence 78899999999999999999999999999999999999999865321 11223366666666666553
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.1e-29 Score=216.04 Aligned_cols=175 Identities=29% Similarity=0.396 Sum_probs=147.7
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHc
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIE 129 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~ 129 (320)
.+|+++||||++|||++++++|+++|++|++++|+.++. . . ...+.+|++|. +++.++++.+.
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~-----~--~~~~~~D~~~~~~~~~~~~~~~~~-- 66 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD------F-----P--GELFACDLADIEQTAATLAQINEI-- 66 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc------c-----C--ceEEEeeCCCHHHHHHHHHHHHHh--
Confidence 478999999999999999999999999999999987540 0 1 14678999885 12333333333
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhH
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA 209 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~ 209 (320)
.++|++|||||.... .++.+.+.+++++.+++|+.+++.+++.++|.|++++.++||++||... . +.++...|+
T Consensus 67 -~~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~-~--~~~~~~~Y~ 140 (234)
T PRK07577 67 -HPVDAIVNNVGIALP--QPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAI-F--GALDRTSYS 140 (234)
T ss_pred -CCCcEEEECCCCCCC--CChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccc-c--CCCCchHHH
Confidence 256799999998664 5677888999999999999999999999999998888899999999864 3 456788999
Q ss_pred HHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 210 asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
+||+++++++++++.|+++.||+|++|+||+++|++..
T Consensus 141 ~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~ 178 (234)
T PRK07577 141 AAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFR 178 (234)
T ss_pred HHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccc
Confidence 99999999999999999999999999999999999865
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=8e-29 Score=226.99 Aligned_cols=192 Identities=18% Similarity=0.179 Sum_probs=153.2
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
+.+|+++||||++|||++++++|+++|++|++++|+.++.++..+++... +..+..+.+|++|. +.++++.+.+..
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~--~~v~~~~~~~~~ 79 (322)
T PRK07453 4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIP--PDSYTIIHIDLGDL--DSVRRFVDDFRA 79 (322)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcc--CCceEEEEecCCCH--HHHHHHHHHHHH
Confidence 45899999999999999999999999999999999999888887777432 44688899999985 444444333321
Q ss_pred --CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCC--cEEEEEcCcccccc-------
Q 020854 131 --LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKK--GAIVNIGSGAAIVI------- 199 (320)
Q Consensus 131 --~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~--g~Iv~vsS~~~~~~------- 199 (320)
.++|+||||||+..+ .....+.+.++++.++++|+.|++.+++.++|.|++++. ++||++||.+....
T Consensus 80 ~~~~iD~li~nAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~ 158 (322)
T PRK07453 80 LGKPLDALVCNAAVYMP-LLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIP 158 (322)
T ss_pred hCCCccEEEECCcccCC-CCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccC
Confidence 147799999998643 122346788999999999999999999999999987753 69999999765320
Q ss_pred --------------------------CCCCCchhhHHHHHHHHHHHHHHHHHHc-cCCceEEEEeccce-ecCCCc
Q 020854 200 --------------------------PSDPLYSVYAATKAYIDQFSRSLYVEYR-KSGIDVQCQVPLYV-ATKMAS 247 (320)
Q Consensus 200 --------------------------~~~~~~~~Y~asKaal~~~~~~l~~el~-~~gi~v~~v~PG~v-~T~~~~ 247 (320)
.+......|+.||.+...+++.+++++. ..||+|++++||.| .|++.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~ 234 (322)
T PRK07453 159 IPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFR 234 (322)
T ss_pred CCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcccc
Confidence 0012246799999999999999999994 46999999999999 588865
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-30 Score=208.26 Aligned_cols=217 Identities=24% Similarity=0.286 Sum_probs=184.7
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
.+|-+++||||.||+|++.|++|+++|+.|++.+--.++.++.++++ +.++.+.+.|++++ ++..+.....++
T Consensus 7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel-----g~~~vf~padvtsekdv~aala~ak~kf 81 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL-----GGKVVFTPADVTSEKDVRAALAKAKAKF 81 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh-----CCceEEeccccCcHHHHHHHHHHHHhhc
Confidence 56899999999999999999999999999999999888888888887 67889999999974 355667777778
Q ss_pred cCCCeEEEEEccCCCCCc----cccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC------CcEEEEEcCccccc
Q 020854 129 EGLDVGVLINNVGISYPY----ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK------KGAIVNIGSGAAIV 198 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~----~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~------~g~Iv~vsS~~~~~ 198 (320)
++.| .+|||||+.... ...-...+.|++++++++|+.|+|++++.-.-.|.++. .|.|||+.|++++.
T Consensus 82 grld--~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafd 159 (260)
T KOG1199|consen 82 GRLD--ALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFD 159 (260)
T ss_pred ccee--eeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeec
Confidence 8655 999999996631 11123557899999999999999999999998887653 47999999999998
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCC-CcccC
Q 020854 199 IPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYE-PCCTP 277 (320)
Q Consensus 199 ~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~-~~~~~ 277 (320)
+..+.++|++||.++.+++.-++++++..|||+++|.||..+|||... -||++-..+.+.++.+ |...|
T Consensus 160 --gq~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllss--------lpekv~~fla~~ipfpsrlg~p 229 (260)
T KOG1199|consen 160 --GQTGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSS--------LPEKVKSFLAQLIPFPSRLGHP 229 (260)
T ss_pred --CccchhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhh--------hhHHHHHHHHHhCCCchhcCCh
Confidence 889999999999999999999999999999999999999999999874 5888888888888887 66555
Q ss_pred CchHHHH
Q 020854 278 YWPHSFI 284 (320)
Q Consensus 278 ~~~~~~~ 284 (320)
.+-..++
T Consensus 230 ~eyahlv 236 (260)
T KOG1199|consen 230 HEYAHLV 236 (260)
T ss_pred HHHHHHH
Confidence 5444443
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.2e-29 Score=205.50 Aligned_cols=161 Identities=29% Similarity=0.452 Sum_probs=142.1
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCC--HHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRN--PDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~--~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
|+++||||++|||++++++|+++|+ +|++++|+ .+..++..+++++. +.++.++++|+++. ++..++++.+..
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAP--GAKITFIECDLSDPESIRALIEEVIKRF 78 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHT--TSEEEEEESETTSHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccc--cccccccccccccccccccccccccccc
Confidence 7899999999999999999999966 78899999 77788888888754 57899999999985 345556666555
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
+. +|++|||||.... +++.+.+.+++++++++|+.+++++.+.+.| ++.|+||++||.++.. +.|++..|
T Consensus 79 ~~--ld~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~~g~iv~~sS~~~~~--~~~~~~~Y 148 (167)
T PF00106_consen 79 GP--LDILINNAGIFSD--GSLDDLSEEELERVFRVNLFGPFLLAKALLP----QGGGKIVNISSIAGVR--GSPGMSAY 148 (167)
T ss_dssp SS--ESEEEEECSCTTS--BSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HTTEEEEEEEEGGGTS--SSTTBHHH
T ss_pred cc--ccccccccccccc--cccccccchhhhhccccccceeeeeeehhee----ccccceEEecchhhcc--CCCCChhH
Confidence 54 6699999999874 7788999999999999999999999999999 4589999999999998 78999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 020854 209 AATKAYIDQFSRSLYVEY 226 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el 226 (320)
++||+|+.+|+++|+.|+
T Consensus 149 ~askaal~~~~~~la~e~ 166 (167)
T PF00106_consen 149 SASKAALRGLTQSLAAEL 166 (167)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 999999999999999996
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-28 Score=214.27 Aligned_cols=209 Identities=23% Similarity=0.275 Sum_probs=166.1
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeC-CHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++++++||||++|||++++++|+++|++|++..| +.+......+.+++. +.++..+.+|+++. +.+.++++.+.
T Consensus 4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (252)
T PRK06077 4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN--GGEGIGVLADVSTREGCETLAKATIDR 81 (252)
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHc--CCeeEEEEeccCCHHHHHHHHHHHHHH
Confidence 56899999999999999999999999999988775 445555555555543 34677889999985 23445555555
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
++ ++|++|||||.... .++.+.+.+.+++.+++|+.+++.+++.+.|.+.+ .++||++||.++.. +.++...
T Consensus 82 ~~--~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~sS~~~~~--~~~~~~~ 153 (252)
T PRK06077 82 YG--VADILVNNAGLGLF--SPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE--GGAIVNIASVAGIR--PAYGLSI 153 (252)
T ss_pred cC--CCCEEEECCCCCCC--CChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc--CcEEEEEcchhccC--CCCCchH
Confidence 55 46699999998654 45677888889999999999999999999999864 48999999999987 6788899
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccC---------------CCCCCCHHHHHHHHHHHhC
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRS---------------SFFVPSTDVYARAAMRWIG 270 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~---------------~~~~~~~~~~a~~i~~~l~ 270 (320)
|++||+++++++++++.|+.+ ||+++.+.||+++|++...... .....+||++|+.++..+.
T Consensus 154 Y~~sK~~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~ 230 (252)
T PRK06077 154 YGAMKAAVINLTKYLALELAP-KIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAILK 230 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHhc-CCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHHHHHhC
Confidence 999999999999999999988 9999999999999998542100 1123566666666666654
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-28 Score=214.53 Aligned_cols=185 Identities=29% Similarity=0.387 Sum_probs=157.1
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA 127 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 127 (320)
.++++|++++||||++|||+++++.|+++|++|++++|+.++.++..++. ....+.+|+++. +.++++.+.
T Consensus 4 ~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~--~~v~~~~~~ 74 (245)
T PRK07060 4 AFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-------GCEPLRLDVGDD--AAIRAALAA 74 (245)
T ss_pred ccccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------CCeEEEecCCCH--HHHHHHHHH
Confidence 34567999999999999999999999999999999999988766554432 245678999875 555566555
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccccCCCCCch
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
.+ ++|++|||||.... .+..+.+.+++++++++|+.+++.+++.+.+.+.+++ .++||++||..+.. +.+...
T Consensus 75 ~~--~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~ 148 (245)
T PRK07060 75 AG--AFDGLVNCAGIASL--ESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALV--GLPDHL 148 (245)
T ss_pred hC--CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcC--CCCCCc
Confidence 54 46699999998653 4566788899999999999999999999999987654 48999999999887 667889
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
.|++||++++.++++++.++.+.||++++++||.++|++..
T Consensus 149 ~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~ 189 (245)
T PRK07060 149 AYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAA 189 (245)
T ss_pred HhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhh
Confidence 99999999999999999999999999999999999999854
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.6e-28 Score=214.72 Aligned_cols=184 Identities=27% Similarity=0.377 Sum_probs=157.6
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCc--HHHHHHHHHHHcC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDL--DEGVERIKEAIEG 130 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~--~~~~~~~~~~~~~ 130 (320)
+|+++||||++|||++++++|+++|++|++++|+.++.++..+++. +.++..+++|+.|.. ...++++.+.+++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 77 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG----DARFVPVACDLTDAASLAAALANAAAERGP 77 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 6899999999999999999999999999999999988877766662 346888999999852 3444555555554
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHH
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA 210 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~a 210 (320)
+|++|||+|...+ .++.+.+.+++++.+++|+.+++.+.+.+++.+.+++.++||++||..+.. ..+...|++
T Consensus 78 --~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~---~~~~~~y~~ 150 (257)
T PRK07074 78 --VDVLVANAGAARA--ASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMA---ALGHPAYSA 150 (257)
T ss_pred --CCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcC---CCCCcccHH
Confidence 5699999998654 456778899999999999999999999999999888889999999987754 235678999
Q ss_pred HHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 211 TKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 211 sKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
+|+++++++++++.|+.+.||+|++++||+++|++..
T Consensus 151 sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~ 187 (257)
T PRK07074 151 AKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWE 187 (257)
T ss_pred HHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhh
Confidence 9999999999999999999999999999999999854
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-28 Score=212.64 Aligned_cols=174 Identities=17% Similarity=0.242 Sum_probs=149.6
Q ss_pred EEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeEEE
Q 020854 57 LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGVL 136 (320)
Q Consensus 57 lITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 136 (320)
+|||||+|||++++++|+++|++|++++|+.+++++..+++.+ +..+.++.+|++|. +.++++.+.+++ +|++
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~--~~~~~~~~~~~~--id~l 73 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG---GAPVRTAALDITDE--AAVDAFFAEAGP--FDHV 73 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCceEEEEccCCCH--HHHHHHHHhcCC--CCEE
Confidence 6999999999999999999999999999998887777666642 45678889999987 556666666654 6699
Q ss_pred EEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHHHHHHHH
Q 020854 137 INNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYID 216 (320)
Q Consensus 137 I~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~ 216 (320)
|||+|.... .++.+.+.+++++++++|+.+++++++ .+.+ ++.|+||++||.++.. +.+....|++||++++
T Consensus 74 i~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~--~~~g~iv~~ss~~~~~--~~~~~~~Y~~sK~a~~ 145 (230)
T PRK07041 74 VITAADTPG--GPVRALPLAAAQAAMDSKFWGAYRVAR--AARI--APGGSLTFVSGFAAVR--PSASGVLQGAINAALE 145 (230)
T ss_pred EECCCCCCC--CChhhCCHHHHHHHHHHHHHHHHHHHh--hhhh--cCCeEEEEECchhhcC--CCCcchHHHHHHHHHH
Confidence 999998764 567788999999999999999999999 4444 3568999999999987 6788899999999999
Q ss_pred HHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 217 QFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 217 ~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
+++++++.|+.. |+|++++||+++|++..
T Consensus 146 ~~~~~la~e~~~--irv~~i~pg~~~t~~~~ 174 (230)
T PRK07041 146 ALARGLALELAP--VRVNTVSPGLVDTPLWS 174 (230)
T ss_pred HHHHHHHHHhhC--ceEEEEeecccccHHHH
Confidence 999999999965 99999999999999865
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.3e-28 Score=212.20 Aligned_cols=212 Identities=30% Similarity=0.331 Sum_probs=175.0
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
+++|+++||||+++||++++++|+++|++|++++|+.++.++..+++.+. +..+..+.+|++|. +++.++++.+.+
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAA--GGKARARQVDVRDRAALKAAVAAGVEDF 81 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 45899999999999999999999999999999999988888777777654 34588899999975 244455555555
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccc-ccCCCCCchh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAI-VIPSDPLYSV 207 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~-~~~~~~~~~~ 207 (320)
+. +|++|||+|.... .++.+.+.+++++.+++|+.+++.+.+.++|.|.+++.++||++||..+. . +.++...
T Consensus 82 ~~--~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~--~~~~~~~ 155 (251)
T PRK12826 82 GR--LDILVANAGIFPL--TPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRV--GYPGLAH 155 (251)
T ss_pred CC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhcc--CCCCccH
Confidence 54 6699999998764 56778889999999999999999999999999988888999999999987 5 5677889
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcccc------------CCCCCCCHHHHHHHHHHHhC
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKR------------SSFFVPSTDVYARAAMRWIG 270 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~------------~~~~~~~~~~~a~~i~~~l~ 270 (320)
|+++|+++++++++++.++.+.|++++.++||.+.|+...... +...+.+++++|+.++..+.
T Consensus 156 y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 230 (251)
T PRK12826 156 YAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPLGRLGEPEDIAAAVLFLAS 230 (251)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999764211 11123566777777666554
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-27 Score=209.15 Aligned_cols=213 Identities=24% Similarity=0.306 Sum_probs=175.5
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||+++||||+|+||++++++|+++|++|++++|+.++.++..+++... ....+.+|+.|. +++.++++.+.
T Consensus 4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (239)
T PRK12828 4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD----ALRIGGIDLVDPQAARRAVDEVNRQ 79 (239)
T ss_pred CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc----CceEEEeecCCHHHHHHHHHHHHHH
Confidence 356899999999999999999999999999999999988777666665432 355677999875 24455555555
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
+++ +|++|||+|.... .++.+.+.+.+++.+++|+.+++.+++.++|.+.+++.++||++||..+.. +.+....
T Consensus 80 ~~~--~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~ 153 (239)
T PRK12828 80 FGR--LDALVNIAGAFVW--GTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALK--AGPGMGA 153 (239)
T ss_pred hCC--cCEEEECCcccCc--CChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhcc--CCCCcch
Confidence 654 5699999997653 456677899999999999999999999999999888889999999999887 5677889
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccC---CCCCCCHHHHHHHHHHHhCCC
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRS---SFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~---~~~~~~~~~~a~~i~~~l~~~ 272 (320)
|+++|++++.++++++.++.+.|++++.+.||++.|++.....+ ...+.+++++++.+...+..+
T Consensus 154 y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~ 221 (239)
T PRK12828 154 YAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMPDADFSRWVTPEQIAAVIAFLLSDE 221 (239)
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCCchhhhcCCCHHHHHHHHHHHhCcc
Confidence 99999999999999999998899999999999999997653221 122467899999988887644
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-27 Score=209.48 Aligned_cols=187 Identities=28% Similarity=0.408 Sum_probs=154.8
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEE-EeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHcC
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEG 130 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~ 130 (320)
|+++||||+||||++++++|+++|++|++ ..|+.++.++..+++... +..+..+.+|++|. +++.++++.+.++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~~~~~- 78 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA--GGKAFVLQADISDENQVVAMFTAIDQHDE- 78 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhC--CCeEEEEEccCCCHHHHHHHHHHHHHhCC-
Confidence 68999999999999999999999999987 568887777777777553 34578899999986 2333444444444
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC---CcEEEEEcCccccccCCCCC-ch
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK---KGAIVNIGSGAAIVIPSDPL-YS 206 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~---~g~Iv~vsS~~~~~~~~~~~-~~ 206 (320)
++|++|||||.... ..++.+.+.++++.++++|+.+++.+++.+++.+.++. +|+||++||..+.. +.++ ..
T Consensus 79 -~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~--~~~~~~~ 154 (247)
T PRK09730 79 -PLAALVNNAGILFT-QCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRL--GAPGEYV 154 (247)
T ss_pred -CCCEEEECCCCCCC-CCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcc--CCCCccc
Confidence 46699999997643 24567889999999999999999999999999987653 57899999998877 4454 46
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
.|+++|++++.++++++.|+.++|+++++++||.+.|++..
T Consensus 155 ~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~ 195 (247)
T PRK09730 155 DYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHA 195 (247)
T ss_pred chHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccc
Confidence 79999999999999999999999999999999999999854
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-27 Score=208.54 Aligned_cols=190 Identities=30% Similarity=0.432 Sum_probs=159.0
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHH-HHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD-KLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
.+.+|+++|||||||||.+++++|+++|++|++++|+.+ ..+...+++... +.++..+.+|+++. +.+.++++.+
T Consensus 2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (248)
T PRK05557 2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGAL--GGKALAVQGDVSDAESVERAVDEAKA 79 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 356899999999999999999999999999988887654 355555555443 45688899999985 2334444444
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
.++ ++|++|||||.... .+..+.+.+.+++.+++|+.+++.+.+.+.|.+.+++.+++|++||..+.. +.++..
T Consensus 80 ~~~--~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~--~~~~~~ 153 (248)
T PRK05557 80 EFG--GVDILVNNAGITRD--NLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLM--GNPGQA 153 (248)
T ss_pred HcC--CCCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCc--CCCCCc
Confidence 444 46699999998664 456678889999999999999999999999999887788999999998877 567788
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
.|+++|++++.++++++.++...|+++++++||+++|++..
T Consensus 154 ~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~ 194 (248)
T PRK05557 154 NYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTD 194 (248)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCcccc
Confidence 99999999999999999999999999999999999998865
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=229.26 Aligned_cols=184 Identities=24% Similarity=0.355 Sum_probs=154.0
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH--HHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP--DKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++|++++||||++|||++++++|+++|++|+++++.. +++++..+++ ....+.+|++|. +++.++.+.+
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~-------~~~~~~~Dv~~~~~~~~~~~~~~~ 280 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV-------GGTALALDITAPDAPARIAEHLAE 280 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc-------CCeEEEEeCCCHHHHHHHHHHHHH
Confidence 5689999999999999999999999999999999843 3344333322 234678999985 2334444444
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
.++ ++|+||||||.... ..+.+.+.+.++.++++|+.|++++.+.+.+.+..++.++||++||.++.. +.++..
T Consensus 281 ~~g--~id~vi~~AG~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~--g~~~~~ 354 (450)
T PRK08261 281 RHG--GLDIVVHNAGITRD--KTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIA--GNRGQT 354 (450)
T ss_pred hCC--CCCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcC--CCCCCh
Confidence 444 46699999998764 567889999999999999999999999999976656779999999999987 678889
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
.|+++|+++++|+++++.|++++||++++|+||+++|+|..
T Consensus 355 ~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~ 395 (450)
T PRK08261 355 NYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTA 395 (450)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhh
Confidence 99999999999999999999999999999999999999865
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.9e-27 Score=205.53 Aligned_cols=212 Identities=28% Similarity=0.411 Sum_probs=173.1
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
+.+++++||||++|||.+++++|+++|++|++++|+.++.+...+++.+. +.++..+.+|++|. +.+.++++.+.+
T Consensus 3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (246)
T PRK05653 3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAA--GGEARVLVFDVSDEAAVRALIEAAVEAF 80 (246)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 45789999999999999999999999999999999998888777777643 45688888999985 233444444444
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
+ ++|++|||+|.... .+..+.+.+++++.++.|+.+++.+++.+.|++.+.+.++||++||..+.. +.+....|
T Consensus 81 ~--~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~--~~~~~~~y 154 (246)
T PRK05653 81 G--ALDILVNNAGITRD--ALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVT--GNPGQTNY 154 (246)
T ss_pred C--CCCEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc--CCCCCcHh
Confidence 5 46699999998654 556678899999999999999999999999999877778999999998877 56778899
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc-----------ccCCCCCCCHHHHHHHHHHHhC
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI-----------KRSSFFVPSTDVYARAAMRWIG 270 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~-----------~~~~~~~~~~~~~a~~i~~~l~ 270 (320)
+.+|++++.++++++.++.+.|+++++++||.+.+++... ..+.....+++++++.+...+.
T Consensus 155 ~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~ 227 (246)
T PRK05653 155 SAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEVKAEILKEIPLGRLGQPEEVANAVAFLAS 227 (246)
T ss_pred HhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence 9999999999999999999899999999999999998752 1111223456667766666654
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.4e-27 Score=207.84 Aligned_cols=186 Identities=27% Similarity=0.389 Sum_probs=159.4
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHcC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEG 130 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~ 130 (320)
+|++|||||+|+||++++++|+++|++|++++|+.+..++..+++... +.++..+.+|++|. +++.++.+.+.++.
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDA--GGSVIYLVADVTKEDEIADMIAAAAAEFGG 78 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 578999999999999999999999999999999998887777766543 35688899999985 23344455544454
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHH
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA 210 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~a 210 (320)
+|++|||||.... .+..+.+.+++++++++|+.|++.+++.++|.|.+.+.+++|++||..+.. +.++...|++
T Consensus 79 --~d~vi~~a~~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~--~~~~~~~y~~ 152 (255)
T TIGR01963 79 --LDILVNNAGIQHV--APIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLV--ASPFKSAYVA 152 (255)
T ss_pred --CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcC--CCCCCchhHH
Confidence 6699999998654 445677888999999999999999999999999888788999999998877 6678899999
Q ss_pred HHHHHHHHHHHHHHHHccCCceEEEEeccceecCCC
Q 020854 211 TKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMA 246 (320)
Q Consensus 211 sKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~ 246 (320)
+|+++++++++++.++.+.|++|+.++||++.|++.
T Consensus 153 sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~ 188 (255)
T TIGR01963 153 AKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLV 188 (255)
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHH
Confidence 999999999999999988899999999999999874
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.9e-27 Score=235.40 Aligned_cols=188 Identities=27% Similarity=0.339 Sum_probs=164.4
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
+.||+++||||+||||++++++|+++|++|++++|+.+++++..+++... ..+..+.+|++|. +.+.++++.+.+
T Consensus 420 l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~---~~v~~v~~Dvtd~~~v~~~~~~~~~~~ 496 (681)
T PRK08324 420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP---DRALGVACDVTDEAAVQAAFEEAALAF 496 (681)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc---CcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 56899999999999999999999999999999999998888777766442 4688899999985 234455555555
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCC-cEEEEEcCccccccCCCCCchh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~-g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
++ +|++|||||.... .++.+.+.+.++.++++|+.|++.+++.+.|.|++++. |+||++||..+.. +.++...
T Consensus 497 g~--iDvvI~~AG~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~--~~~~~~~ 570 (681)
T PRK08324 497 GG--VDIVVSNAGIAIS--GPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVN--PGPNFGA 570 (681)
T ss_pred CC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccC--CCCCcHH
Confidence 64 5699999998764 66788899999999999999999999999999988764 8999999999987 6788899
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccce--ecCCCc
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYV--ATKMAS 247 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v--~T~~~~ 247 (320)
|++||+++++++++++.|+.+.||+|+.|+||.+ +|+++.
T Consensus 571 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~ 612 (681)
T PRK08324 571 YGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWT 612 (681)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCcccc
Confidence 9999999999999999999999999999999999 898765
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.2e-27 Score=203.19 Aligned_cols=202 Identities=17% Similarity=0.221 Sum_probs=161.9
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCe
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV 133 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 133 (320)
|+++||||++|||++++++|+++|++|++++|+.++.++.. .. .+..+.+|+++. +.++++.+.+...++
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~----~~----~~~~~~~D~~~~--~~v~~~~~~~~~~~~ 71 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ----AL----GAEALALDVADP--ASVAGLAWKLDGEAL 71 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH----hc----cceEEEecCCCH--HHHHHHHHHhcCCCC
Confidence 68999999999999999999999999999999987665432 21 245789999986 566666555554468
Q ss_pred EEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC-CCCCchhhHHHH
Q 020854 134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP-SDPLYSVYAATK 212 (320)
Q Consensus 134 d~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~-~~~~~~~Y~asK 212 (320)
|++|||+|.......+..+.+.++++.++++|+.+++.+++.+.|+|.+ ..|+++++||..+.... +......|+++|
T Consensus 72 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~~~~Y~~sK 150 (222)
T PRK06953 72 DAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEA-AGGVLAVLSSRMGSIGDATGTTGWLYRASK 150 (222)
T ss_pred CEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhc-cCCeEEEEcCcccccccccCCCccccHHhH
Confidence 8999999986432345667789999999999999999999999998865 46899999998876521 111123699999
Q ss_pred HHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCC
Q 020854 213 AYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 213 aal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
++++++++.++.++ .+++|++|+||+++|++... .....+++.++.+.+.+...
T Consensus 151 ~a~~~~~~~~~~~~--~~i~v~~v~Pg~i~t~~~~~----~~~~~~~~~~~~~~~~~~~~ 204 (222)
T PRK06953 151 AALNDALRAASLQA--RHATCIALHPGWVRTDMGGA----QAALDPAQSVAGMRRVIAQA 204 (222)
T ss_pred HHHHHHHHHHhhhc--cCcEEEEECCCeeecCCCCC----CCCCCHHHHHHHHHHHHHhc
Confidence 99999999999986 47999999999999999763 22468899999998887644
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-26 Score=202.88 Aligned_cols=212 Identities=28% Similarity=0.371 Sum_probs=169.4
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCC-HHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-PDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
++|+++||||||+||++++++|+++|++|++..|+ .+..+...+.+... +.++..+.+|++|. +.+.++++.+.+
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL--GRRAQAVQADVTDKAALEAAVAAAVERF 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc--CCceEEEECCcCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999999998886665 44455555555443 34678889999875 133334444444
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
+ ++|++|||||.... .++.+.+.+.+++.+++|+.+++++++.++|++.+.+.+++|++||..+.. +.++...|
T Consensus 83 ~--~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~--~~~~~~~y 156 (249)
T PRK12825 83 G--RIDILVNNAGIFED--KPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLP--GWPGRSNY 156 (249)
T ss_pred C--CCCEEEECCccCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCC--CCCCchHH
Confidence 4 46699999997654 556778899999999999999999999999999888889999999999886 66778899
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc-----------cCCCCCCCHHHHHHHHHHHhCC
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK-----------RSSFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~-----------~~~~~~~~~~~~a~~i~~~l~~ 271 (320)
+.+|++++++++.++.++.+.|++++.++||.+.|++.... .+.....+++++++.+...+..
T Consensus 157 ~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~ 230 (249)
T PRK12825 157 AAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAKDAETPLGRSGTPEDIARAVAFLCSD 230 (249)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhhhccCCCCCCcCHHHHHHHHHHHhCc
Confidence 99999999999999999998999999999999999986531 1112245677777777776643
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-26 Score=206.06 Aligned_cols=188 Identities=24% Similarity=0.321 Sum_probs=158.6
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCc--HHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDL--DEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~--~~~~~~~~~~~ 128 (320)
+++++++||||+||||++++++|+++|++|++++|+.+..++..++.. +.++..+.+|++|.. .+.++++.+.+
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP----GAKVTATVADVADPAQVERVFDTAVERF 84 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh----cCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 568999999999999999999999999999999999887766555442 225788899999852 34445555555
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCC-cEEEEEcCccccccCCCCCchh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~-g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
+ ++|+||||||...+ ..++.+.+.+.+++++++|+.+++.+++.+++.+...+. ++|+++||.++.. +.++...
T Consensus 85 ~--~~d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~--~~~~~~~ 159 (264)
T PRK12829 85 G--GLDVLVNNAGIAGP-TGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRL--GYPGRTP 159 (264)
T ss_pred C--CCCEEEECCCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEeccccccc--CCCCCch
Confidence 5 46699999998733 245667888999999999999999999999998877665 7899999988876 6677889
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
|+++|++++.+++.++.++.+.+++++++.||++.|++..
T Consensus 160 y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~ 199 (264)
T PRK12829 160 YAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMR 199 (264)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHH
Confidence 9999999999999999999888999999999999999865
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.5e-26 Score=199.49 Aligned_cols=211 Identities=20% Similarity=0.239 Sum_probs=166.7
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||+++||||++|||.++++.|+++|++|++++|+.++.++..+++... ..++.+++|+++. +++.++++...
T Consensus 2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~ 78 (238)
T PRK05786 2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY---GNIHYVVGDVSSTESARNVIEKAAKV 78 (238)
T ss_pred CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEECCCCCHHHHHHHHHHHHHH
Confidence 356899999999999999999999999999999999998877766666442 2578889999985 23344444444
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
++. +|.+|+|+|.... .++. +.++++.++++|+.+++.+.+.++|.+.+ .+++|++||..+... +.+....
T Consensus 79 ~~~--id~ii~~ag~~~~--~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~-~~~~~~~ 149 (238)
T PRK05786 79 LNA--IDGLVVTVGGYVE--DTVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKE--GSSIVLVSSMSGIYK-ASPDQLS 149 (238)
T ss_pred hCC--CCEEEEcCCCcCC--CchH--HHHHHHHHHHHhchHHHHHHHHHHHHHhc--CCEEEEEecchhccc-CCCCchH
Confidence 553 5699999987543 2233 33788999999999999999999998853 589999999877432 4566788
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc------cCCCCCCCHHHHHHHHHHHhCCC
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK------RSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~------~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
|++||+++..++++++.++.+.||++++|+||++.|++.... .......+++++++.++..+..+
T Consensus 150 Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~ 220 (238)
T PRK05786 150 YAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPERNWKKLRKLGDDMAPPEDFAKVIIWLLTDE 220 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchhhhhhhccccCCCCCHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999999999975321 01123568899999988887543
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.5e-26 Score=199.34 Aligned_cols=184 Identities=32% Similarity=0.480 Sum_probs=154.6
Q ss_pred EEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH-HHHHHHHHHHHhhcCCceEEEEEEeCCCCc--HHHHHHHHHHHcCCC
Q 020854 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP-DKLKDVSDSIQAKYAKTQIKSVVVDFSGDL--DEGVERIKEAIEGLD 132 (320)
Q Consensus 56 vlITGas~GIG~ala~~l~~~G~~Vil~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~--~~~~~~~~~~~~~~~ 132 (320)
++|||++++||..++++|+++|++|++++|+. +..++..+++... +.++..+.+|++|.. ++.++.+.+.++ +
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~ 76 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAY--GVKALGVVCDVSDREDVKAVVEEIEEELG--P 76 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHhC--C
Confidence 58999999999999999999999999999875 4555555556543 346888999999852 334444455455 4
Q ss_pred eEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHHHH
Q 020854 133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATK 212 (320)
Q Consensus 133 id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asK 212 (320)
+|+||||+|.... .++.+.+.+.+++++++|+.+++.+++.+.+.+.+.+.++++++||.++.. +.+....|+++|
T Consensus 77 id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~--g~~~~~~y~~~k 152 (239)
T TIGR01830 77 IDILVNNAGITRD--NLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLM--GNAGQANYAASK 152 (239)
T ss_pred CCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccC--CCCCCchhHHHH
Confidence 6699999998654 456677889999999999999999999999999877788999999998887 667889999999
Q ss_pred HHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 213 AYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 213 aal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
++++.++++|+.++...|+++++++||+++|++..
T Consensus 153 ~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~ 187 (239)
T TIGR01830 153 AGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTD 187 (239)
T ss_pred HHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhh
Confidence 99999999999999999999999999999998764
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.6e-27 Score=205.73 Aligned_cols=183 Identities=23% Similarity=0.266 Sum_probs=143.4
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHH-HHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD-KLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+.||+++||||+||||++++++|+++|++|++++|+.+ ..+...+++... +.++..+.+|++|. +...++++.+.
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAA--GGRASAVGADLTDEESVAALMDTAREE 81 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 45899999999999999999999999999999999753 455666666543 34578899999985 23344444444
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccccc---CCCCC
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI---PSDPL 204 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~---~~~~~ 204 (320)
++ ++|++|||||.... . +.+ ++..+++|+.|++++++.+.|+|.+ .++||++||..+... .+.+.
T Consensus 82 ~~--~~d~vi~~ag~~~~--~---~~~---~~~~~~vn~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~~~ 149 (248)
T PRK07806 82 FG--GLDALVLNASGGME--S---GMD---EDYAMRLNRDAQRNLARAALPLMPA--GSRVVFVTSHQAHFIPTVKTMPE 149 (248)
T ss_pred CC--CCcEEEECCCCCCC--C---CCC---cceeeEeeeHHHHHHHHHHHhhccC--CceEEEEeCchhhcCccccCCcc
Confidence 44 46699999986432 1 111 3567889999999999999998843 579999999655321 13455
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
+..|++||++++.++++++.|+++.||+|++|+||.++|++..
T Consensus 150 ~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~ 192 (248)
T PRK07806 150 YEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTA 192 (248)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhh
Confidence 7789999999999999999999999999999999999998754
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.7e-26 Score=198.41 Aligned_cols=188 Identities=24% Similarity=0.286 Sum_probs=153.1
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCC-HHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-PDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
.++++++||||+||||++++++|+++|++|++++|+ .+..++..+.+.+.. ...+..+.+|++|. +...++.+.+.
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 82 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALR-PGSAAALQADLLDPDALPELVAACVAA 82 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc-CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 357999999999999999999999999999999986 444555555554432 33578889999985 23344444444
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
++. +|+||||||.... .++.+.+.++++.++++|+.|++.+.+++.|.+.++ .+++++++|..+.. +.++...
T Consensus 83 ~~~--~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~ 155 (249)
T PRK09135 83 FGR--LDALVNNASSFYP--TPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ-RGAIVNITDIHAER--PLKGYPV 155 (249)
T ss_pred cCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC-CeEEEEEeChhhcC--CCCCchh
Confidence 554 6699999998654 456677888999999999999999999999988654 58899999877766 5677889
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
|++||++++.++++++.++.+ +++++++.||++.||+..
T Consensus 156 Y~~sK~~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~ 194 (249)
T PRK09135 156 YCAAKAALEMLTRSLALELAP-EVRVNAVAPGAILWPEDG 194 (249)
T ss_pred HHHHHHHHHHHHHHHHHHHCC-CCeEEEEEeccccCcccc
Confidence 999999999999999999965 799999999999999853
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.4e-25 Score=189.88 Aligned_cols=204 Identities=25% Similarity=0.333 Sum_probs=168.5
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
+|+++||||+|+||++++++|+++ ++|++++|+.++.++..++. ..+.++.+|++|. +.++++.+.++ +
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~--~~~~~~~~~~~--~ 71 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL------PGATPFPVDLTDP--EAIAAAVEQLG--R 71 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh------ccceEEecCCCCH--HHHHHHHHhcC--C
Confidence 578999999999999999999999 99999999987765543322 2367889999986 55566665554 4
Q ss_pred eEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHHHH
Q 020854 133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATK 212 (320)
Q Consensus 133 id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asK 212 (320)
+|+|||++|.... .++.+.+.+++.+++++|+.+++.+++.+++.+.++ .+++|++||..+.. +.++...|+.+|
T Consensus 72 id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~--~~~~~~~y~~~K 146 (227)
T PRK08219 72 LDVLVHNAGVADL--GPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLR--ANPGWGSYAASK 146 (227)
T ss_pred CCEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcC--cCCCCchHHHHH
Confidence 6799999998653 456778899999999999999999999999988765 58999999999877 567788999999
Q ss_pred HHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc-------ccCCCCCCCHHHHHHHHHHHhCCCC
Q 020854 213 AYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI-------KRSSFFVPSTDVYARAAMRWIGYEP 273 (320)
Q Consensus 213 aal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~-------~~~~~~~~~~~~~a~~i~~~l~~~~ 273 (320)
++++.+++.++.++... +++++++||.++|++... ..+...+.+++++++.++..+..++
T Consensus 147 ~a~~~~~~~~~~~~~~~-i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~~ 213 (227)
T PRK08219 147 FALRALADALREEEPGN-VRVTSVHPGRTDTDMQRGLVAQEGGEYDPERYLRPETVAKAVRFAVDAPP 213 (227)
T ss_pred HHHHHHHHHHHHHhcCC-ceEEEEecCCccchHhhhhhhhhccccCCCCCCCHHHHHHHHHHHHcCCC
Confidence 99999999999988766 999999999999987542 1122335799999999999987663
|
|
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.1e-26 Score=191.83 Aligned_cols=226 Identities=18% Similarity=0.146 Sum_probs=156.0
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHc
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIE 129 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~ 129 (320)
.++++|+||+|+|||..++..+.+.+-..+..+++....+ .+.++..+++ .......|.+++ ..+..+...+..+
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~~gd-~~v~~~g~~~e~~~l~al~e~~r~k~g 81 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVAYGD-DFVHVVGDITEEQLLGALREAPRKKGG 81 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEEecC-CcceechHHHHHHHHHHHHhhhhhcCC
Confidence 4689999999999999999888887765554444433322 1111111110 111111122211 0222223333333
Q ss_pred CCCeEEEEEccCCCCCccc-cccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccccCCCCCchh
Q 020854 130 GLDVGVLINNVGISYPYAR-FFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~-~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
..|++|||||...+..+ ..+..+.+.|++.++.|+++++.+.+.++|.+++++ .+.|||+||.++.. |.+++++
T Consensus 82 --kr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~--p~~~wa~ 157 (253)
T KOG1204|consen 82 --KRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVR--PFSSWAA 157 (253)
T ss_pred --ceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhc--cccHHHH
Confidence 56799999999876322 234678889999999999999999999999998885 79999999999999 8999999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHH
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGV 287 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l 287 (320)
||++|+|.++|++.|+.|-. .+++|.++.||.+||+|........ -++|+..... -.....++...|......+..+
T Consensus 158 yc~~KaAr~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~ir~~~-~~~p~~l~~f-~el~~~~~ll~~~~~a~~l~~L 234 (253)
T KOG1204|consen 158 YCSSKAARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCIRETS-RMTPADLKMF-KELKESGQLLDPQVTAKVLAKL 234 (253)
T ss_pred hhhhHHHHHHHHHHHhhcCc-cceeEEEccCCcccchhHHHHhhcc-CCCHHHHHHH-HHHHhcCCcCChhhHHHHHHHH
Confidence 99999999999999999953 6999999999999999976422222 3566654332 3333445666666666655544
|
|
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-23 Score=177.28 Aligned_cols=193 Identities=22% Similarity=0.227 Sum_probs=163.3
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCC-----eEEEEeCCHHHHHHHHHHHHhhcC--CceEEEEEEeCCC--CcHHHHHH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGL-----NLVLVGRNPDKLKDVSDSIQAKYA--KTQIKSVVVDFSG--DLDEGVER 123 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~-----~Vil~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~~~--~~~~~~~~ 123 (320)
.|+++|||++||||.++|++|.+... ++++++|+.++.++.++.+.+.+| ..++.++.+|+++ ++....++
T Consensus 3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d 82 (341)
T KOG1478|consen 3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD 82 (341)
T ss_pred ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence 48999999999999999999987643 488899999999999999999888 5678899999998 44667788
Q ss_pred HHHHHcCCCeEEEEEccCCCCCcc------------ccc-------------cCCCHHHHHHHHHHHhHHHHHHHHHHhH
Q 020854 124 IKEAIEGLDVGVLINNVGISYPYA------------RFF-------------HEVDQVLLKNLIKVNVEGTTKVTQAVLP 178 (320)
Q Consensus 124 ~~~~~~~~~id~lI~nAG~~~~~~------------~~~-------------~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 178 (320)
+.++++++| .+..|||++.-.. .++ ...+.+++..+|++|++|++++++.+.|
T Consensus 83 i~~rf~~ld--~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~p 160 (341)
T KOG1478|consen 83 IKQRFQRLD--YIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEP 160 (341)
T ss_pred HHHHhhhcc--EEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhh
Confidence 888888766 9999999876210 000 2345678899999999999999999999
Q ss_pred hhhcCCCcEEEEEcCcccccc-------CCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 179 GMLKRKKGAIVNIGSGAAIVI-------PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 179 ~l~~~~~g~Iv~vsS~~~~~~-------~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
++..++...+|++||..+.-. ....+..+|++||.+++-++-++.+.+.+.|+--++++||..-|.++.
T Consensus 161 ll~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~ 236 (341)
T KOG1478|consen 161 LLCHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFS 236 (341)
T ss_pred HhhcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhh
Confidence 998777779999999888541 122456789999999999999999999999999999999999999876
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2e-22 Score=168.32 Aligned_cols=228 Identities=18% Similarity=0.130 Sum_probs=186.9
Q ss_pred ccCCCEEEEECCC--CcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHH
Q 020854 50 RKYGSWALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 50 ~~~gk~vlITGas--~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
.+.||+.||+|=. ++|+..+|+.|.++|+++..+..++ ++++..+++.+..+ .-..++||++++ ++..++++.
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~--s~~v~~cDV~~d~~i~~~f~~i~ 79 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELG--SDLVLPCDVTNDESIDALFATIK 79 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhcc--CCeEEecCCCCHHHHHHHHHHHH
Confidence 4679999999966 6999999999999999999999887 67776666655432 256789999985 356677777
Q ss_pred HHHcCCCeEEEEEccCCCCC--ccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCC
Q 020854 126 EAIEGLDVGVLINNVGISYP--YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP 203 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~ 203 (320)
++++. +|.|||+.|+... ..+.+-|++.|.+...+++..++...+++++.|+| +++|+||.+|=..+.+ ..|
T Consensus 80 ~~~g~--lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM--~~ggSiltLtYlgs~r--~vP 153 (259)
T COG0623 80 KKWGK--LDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLM--NNGGSILTLTYLGSER--VVP 153 (259)
T ss_pred HhhCc--ccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhc--CCCCcEEEEEecccee--ecC
Confidence 77775 5599999998762 23567789999999999999999999999999999 4689999999988887 678
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHH
Q 020854 204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSF 283 (320)
Q Consensus 204 ~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~ 283 (320)
.+-..+.+|+++++-+|.|+.++.++|||||.|+-|+++|=-... +..-.++-+..-..-+.+|.++++++...
T Consensus 154 nYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasg------I~~f~~~l~~~e~~aPl~r~vt~eeVG~t 227 (259)
T COG0623 154 NYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASG------IGDFRKMLKENEANAPLRRNVTIEEVGNT 227 (259)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhc------cccHHHHHHHHHhhCCccCCCCHHHhhhh
Confidence 899999999999999999999999999999999999999965543 23345555555555566677888888888
Q ss_pred HHHHHhhch
Q 020854 284 IWGVLSILP 292 (320)
Q Consensus 284 ~~~l~~~~P 292 (320)
..||++-+.
T Consensus 228 A~fLlSdLs 236 (259)
T COG0623 228 AAFLLSDLS 236 (259)
T ss_pred HHHHhcchh
Confidence 777766544
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=3e-23 Score=182.44 Aligned_cols=151 Identities=24% Similarity=0.279 Sum_probs=123.5
Q ss_pred HHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeEEEEEccCCCCCccc
Q 020854 69 FAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYAR 148 (320)
Q Consensus 69 la~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~ 148 (320)
+|++|+++|++|++++|+.++.+ . ...+++|++|. +.++++.+.+.+ ++|+||||||....
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~--------~~~~~~Dl~~~--~~v~~~~~~~~~-~iD~li~nAG~~~~--- 61 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMT-----L--------DGFIQADLGDP--ASIDAAVAALPG-RIDALFNIAGVPGT--- 61 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhh-----h--------hHhhcccCCCH--HHHHHHHHHhcC-CCeEEEECCCCCCC---
Confidence 47899999999999999976532 1 13568999876 556666555532 57899999997521
Q ss_pred cccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccccc-------------------------CCCC
Q 020854 149 FFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI-------------------------PSDP 203 (320)
Q Consensus 149 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~-------------------------~~~~ 203 (320)
+.+++++++|+.+++.+++.++|.|.+ .|+||++||.++... .+.+
T Consensus 62 -------~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (241)
T PRK12428 62 -------APVELVARVNFLGLRHLTEALLPRMAP--GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVA 132 (241)
T ss_pred -------CCHHHhhhhchHHHHHHHHHHHHhccC--CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCC
Confidence 136889999999999999999999853 489999999988631 1356
Q ss_pred CchhhHHHHHHHHHHHHHHH-HHHccCCceEEEEeccceecCCCc
Q 020854 204 LYSVYAATKAYIDQFSRSLY-VEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 204 ~~~~Y~asKaal~~~~~~l~-~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
+...|++||+|+.+++++++ .|++++||+||+|+||+++|+|..
T Consensus 133 ~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~ 177 (241)
T PRK12428 133 LATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILG 177 (241)
T ss_pred cccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccc
Confidence 77899999999999999999 999999999999999999999965
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.8e-23 Score=224.16 Aligned_cols=181 Identities=15% Similarity=0.160 Sum_probs=148.2
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHc-CCeEEEEeCCH-------------------------------------------
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKT-GLNLVLVGRNP------------------------------------------- 87 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~-G~~Vil~~r~~------------------------------------------- 87 (320)
.|+++|||||++|||+++|++|+++ |++|++++|+.
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence 5899999999999999999999998 69999999982
Q ss_pred ----HHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHH
Q 020854 88 ----DKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNL 161 (320)
Q Consensus 88 ----~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~ 161 (320)
.+.++..+++.+. +..+.++.||++|. +++.++++.+. + .+|+||||||+... +.+.+.+.++|+++
T Consensus 2076 ~~~~~ei~~~la~l~~~--G~~v~y~~~DVtD~~av~~av~~v~~~-g--~IDgVVhnAGv~~~--~~i~~~t~e~f~~v 2148 (2582)
T TIGR02813 2076 VLSSLEIAQALAAFKAA--GASAEYASADVTNSVSVAATVQPLNKT-L--QITGIIHGAGVLAD--KHIQDKTLEEFNAV 2148 (2582)
T ss_pred cchhHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHh-C--CCcEEEECCccCCC--CCcccCCHHHHHHH
Confidence 0111222333322 45688999999985 24444444443 2 57899999998765 67889999999999
Q ss_pred HHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccce
Q 020854 162 IKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYV 241 (320)
Q Consensus 162 ~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v 241 (320)
+++|+.|++++++.+.+.+ .++||++||+++.. +.++.+.|+++|++++.+++.++.++. +++|++|+||.+
T Consensus 2149 ~~~nv~G~~~Ll~al~~~~----~~~IV~~SSvag~~--G~~gqs~YaaAkaaL~~la~~la~~~~--~irV~sI~wG~w 2220 (2582)
T TIGR02813 2149 YGTKVDGLLSLLAALNAEN----IKLLALFSSAAGFY--GNTGQSDYAMSNDILNKAALQLKALNP--SAKVMSFNWGPW 2220 (2582)
T ss_pred HHHHHHHHHHHHHHHHHhC----CCeEEEEechhhcC--CCCCcHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEECCee
Confidence 9999999999999987643 35799999999998 788999999999999999999999874 599999999999
Q ss_pred ecCCCc
Q 020854 242 ATKMAS 247 (320)
Q Consensus 242 ~T~~~~ 247 (320)
+|+|..
T Consensus 2221 dtgm~~ 2226 (2582)
T TIGR02813 2221 DGGMVN 2226 (2582)
T ss_pred cCCccc
Confidence 999864
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.3e-21 Score=160.01 Aligned_cols=173 Identities=18% Similarity=0.229 Sum_probs=136.3
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHH---HHHHHhhcCCceEEEEEEeCCCCc--HHHHHHHHHH
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDV---SDSIQAKYAKTQIKSVVVDFSGDL--DEGVERIKEA 127 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~---~~~l~~~~~~~~~~~~~~D~~~~~--~~~~~~~~~~ 127 (320)
|+++||||++|||.+++++|+++|+ .|++++|+.+..+.. .+++++. +.++..+.+|+++.. ++.++.+.+.
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEAL--GAEVTVVACDVADRAALAAALAAIPAR 78 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 5799999999999999999999997 688888876544332 2344332 456788899998751 3334444444
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
++ ++|.+|||||.... .++.+.+.+++++++++|+.+++.+.+.+.+ .+.++++++||..+.. +.++...
T Consensus 79 ~~--~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~ii~~ss~~~~~--~~~~~~~ 148 (180)
T smart00822 79 LG--PLRGVIHAAGVLDD--GLLANLTPERFAAVLAPKVDGAWNLHELTRD----LPLDFFVLFSSVAGVL--GNPGQAN 148 (180)
T ss_pred cC--CeeEEEEccccCCc--cccccCCHHHHHHhhchHhHHHHHHHHHhcc----CCcceEEEEccHHHhc--CCCCchh
Confidence 44 46799999998653 4567888999999999999999999999743 4568999999999887 6678899
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEecccee
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVA 242 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~ 242 (320)
|+++|+++..+++.++ +.|+++.++.||+++
T Consensus 149 y~~sk~~~~~~~~~~~----~~~~~~~~~~~g~~~ 179 (180)
T smart00822 149 YAAANAFLDALAAHRR----ARGLPATSINWGAWA 179 (180)
T ss_pred hHHHHHHHHHHHHHHH----hcCCceEEEeecccc
Confidence 9999999999987765 458899999999875
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.8e-19 Score=172.48 Aligned_cols=200 Identities=15% Similarity=0.080 Sum_probs=150.7
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhh-----c--CCceEEEEEEeCCCCcHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAK-----Y--AKTQIKSVVVDFSGDLDEGVER 123 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~-----~--~~~~~~~~~~D~~~~~~~~~~~ 123 (320)
..||+++||||+||||++++++|+++|++|++++|+.++++.+.+++.+. + ...++.++.+|+.|. +.
T Consensus 78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~-----es 152 (576)
T PLN03209 78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKP-----DQ 152 (576)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCH-----HH
Confidence 46899999999999999999999999999999999999888776665431 1 123578899999875 33
Q ss_pred HHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCC
Q 020854 124 IKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP 203 (320)
Q Consensus 124 ~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~ 203 (320)
+.+.+++ +|+||||+|.... ...++...+++|+.|..++++++.. .+.++||++||..+... +.+
T Consensus 153 I~~aLgg--iDiVVn~AG~~~~--------~v~d~~~~~~VN~~Gt~nLl~Aa~~----agVgRIV~VSSiga~~~-g~p 217 (576)
T PLN03209 153 IGPALGN--ASVVICCIGASEK--------EVFDVTGPYRIDYLATKNLVDAATV----AKVNHFILVTSLGTNKV-GFP 217 (576)
T ss_pred HHHHhcC--CCEEEEccccccc--------cccchhhHHHHHHHHHHHHHHHHHH----hCCCEEEEEccchhccc-Ccc
Confidence 4455665 4599999997531 1123567789999999999998754 35689999999877421 222
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc-----------ccCCCCCCCHHHHHHHHHHHhCCC
Q 020854 204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI-----------KRSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 204 ~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~-----------~~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
.. .|. +|+++..+.+.+..++...||+++.|+||++.|++... ........+++++|+.++..+..+
T Consensus 218 ~~-~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~~t~~v~~~~~d~~~gr~isreDVA~vVvfLasd~ 295 (576)
T PLN03209 218 AA-ILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNLTLSEEDTLFGGQVSNLQVAELMACMAKNR 295 (576)
T ss_pred cc-chh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccccccccceeeccccccCCCccCHHHHHHHHHHHHcCc
Confidence 22 244 88888888999999999999999999999999886431 011123468899999999877643
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.2e-19 Score=166.31 Aligned_cols=196 Identities=16% Similarity=0.179 Sum_probs=146.2
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G--~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
++||+++||||+|+||++++++|+++| ++|++++|+..+..+..+.+ ....+.++.+|++|. +.+.++ +
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~----~~~~~~~v~~Dl~d~--~~l~~~---~ 72 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF----PAPCLRFFIGDVRDK--ERLTRA---L 72 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh----CCCcEEEEEccCCCH--HHHHHH---H
Confidence 358999999999999999999999986 68999999876544433322 134578899999986 333333 3
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
.+ +|+|||+||.... +..+.++ .+++++|+.|+.++++++.+ .+.++||++||..... | ...|
T Consensus 73 ~~--iD~Vih~Ag~~~~---~~~~~~~---~~~~~~Nv~g~~~ll~aa~~----~~~~~iV~~SS~~~~~----p-~~~Y 135 (324)
T TIGR03589 73 RG--VDYVVHAAALKQV---PAAEYNP---FECIRTNINGAQNVIDAAID----NGVKRVVALSTDKAAN----P-INLY 135 (324)
T ss_pred hc--CCEEEECcccCCC---chhhcCH---HHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeCCCCCC----C-CCHH
Confidence 33 5699999997532 2223333 46889999999999999875 3457999999976543 2 4679
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCC------cc----cc---C------CCCCCCHHHHHHHHHHHh
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMA------SI----KR---S------SFFVPSTDVYARAAMRWI 269 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~------~~----~~---~------~~~~~~~~~~a~~i~~~l 269 (320)
++||++.+.++++++.+.+..|++++++.||.+..+-. .. .. + ...+...+++++.++..+
T Consensus 136 ~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al 215 (324)
T TIGR03589 136 GATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGSVVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSL 215 (324)
T ss_pred HHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCCCcHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHH
Confidence 99999999999999888888899999999999986521 10 00 0 012468999999999998
Q ss_pred CCC
Q 020854 270 GYE 272 (320)
Q Consensus 270 ~~~ 272 (320)
..+
T Consensus 216 ~~~ 218 (324)
T TIGR03589 216 ERM 218 (324)
T ss_pred hhC
Confidence 653
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.8e-19 Score=148.37 Aligned_cols=172 Identities=20% Similarity=0.253 Sum_probs=130.2
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCH---HHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP---DKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
++|||||.+|||..+++.|+++|. +|++++|+. .+.++..+++++. +.++.++++|++|. +.++++.+.+..
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~--g~~v~~~~~Dv~d~--~~v~~~~~~~~~ 77 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESA--GARVEYVQCDVTDP--EAVAAALAQLRQ 77 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHT--T-EEEEEE--TTSH--HHHHHHHHTSHT
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhC--CCceeeeccCccCH--HHHHHHHHHHHh
Confidence 789999999999999999999986 899999993 2345667777765 67899999999987 566666665543
Q ss_pred --CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 131 --LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 131 --~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
.+++.|||.||...+ .++.+.+.++++.++...+.|..++.+.+.+ .+-..+|++||+++.. +.++.+.|
T Consensus 78 ~~~~i~gVih~ag~~~~--~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~----~~l~~~i~~SSis~~~--G~~gq~~Y 149 (181)
T PF08659_consen 78 RFGPIDGVIHAAGVLAD--APIQDQTPDEFDAVLAPKVRGLWNLHEALEN----RPLDFFILFSSISSLL--GGPGQSAY 149 (181)
T ss_dssp TSS-EEEEEE---------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT----TTTSEEEEEEEHHHHT--T-TTBHHH
T ss_pred ccCCcceeeeeeeeecc--cccccCCHHHHHHHHhhhhhHHHHHHHHhhc----CCCCeEEEECChhHhc--cCcchHhH
Confidence 268899999999765 6789999999999999999999999998755 4567899999999998 88999999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEecccee
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVA 242 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~ 242 (320)
+++.+.++.|++..+. .|..+.+|+.|..+
T Consensus 150 aaAN~~lda~a~~~~~----~g~~~~sI~wg~W~ 179 (181)
T PF08659_consen 150 AAANAFLDALARQRRS----RGLPAVSINWGAWD 179 (181)
T ss_dssp HHHHHHHHHHHHHHHH----TTSEEEEEEE-EBS
T ss_pred HHHHHHHHHHHHHHHh----CCCCEEEEEccccC
Confidence 9999999999887654 47778888887654
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.4e-19 Score=163.71 Aligned_cols=177 Identities=16% Similarity=0.115 Sum_probs=132.0
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
++||+++||||+|+||.+++++|+++|++|++++|+........+.+.. ..++..+.+|++|. +.++++.+.
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~--~~~~~~~~~--- 73 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL---AKKIEDHFGDIRDA--AKLRKAIAE--- 73 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh---cCCceEEEccCCCH--HHHHHHHhh---
Confidence 4589999999999999999999999999999999987654433333321 23566788999876 444444443
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC----------
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------- 200 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~---------- 200 (320)
.++|+|||+||.... +.+.++....+++|+.++.++++++.+. ...+++|++||...+..+
T Consensus 74 ~~~d~vih~A~~~~~------~~~~~~~~~~~~~N~~g~~~ll~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~~e~~ 144 (349)
T TIGR02622 74 FKPEIVFHLAAQPLV------RKSYADPLETFETNVMGTVNLLEAIRAI---GSVKAVVNVTSDKCYRNDEWVWGYRETD 144 (349)
T ss_pred cCCCEEEECCccccc------ccchhCHHHHHHHhHHHHHHHHHHHHhc---CCCCEEEEEechhhhCCCCCCCCCccCC
Confidence 357799999995321 2344556778899999999999987431 225699999997543210
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHcc----CCceEEEEeccceecC
Q 020854 201 SDPLYSVYAATKAYIDQFSRSLYVEYRK----SGIDVQCQVPLYVATK 244 (320)
Q Consensus 201 ~~~~~~~Y~asKaal~~~~~~l~~el~~----~gi~v~~v~PG~v~T~ 244 (320)
+..+...|+.||.+.+.+++.++.++.+ +|+++.++.|+.+..|
T Consensus 145 ~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp 192 (349)
T TIGR02622 145 PLGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGG 192 (349)
T ss_pred CCCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCC
Confidence 1233568999999999999999988754 4899999999988765
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.9e-18 Score=156.34 Aligned_cols=222 Identities=17% Similarity=0.142 Sum_probs=153.7
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.||+++||||+|+||++++++|+++|++|++++|+.++.++..+.........++.++.+|++|. +.++++. .+
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~--~~~~~~~---~~- 77 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDE--GSFELAI---DG- 77 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCc--hHHHHHH---cC-
Confidence 47999999999999999999999999999999998766544322222111124678889999987 3333333 33
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCC----------
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS---------- 201 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~---------- 201 (320)
+|+||||||.... ..+.+.+.+.+++|+.|++++++++.+.+ +.++||++||.++...+.
T Consensus 78 -~d~vih~A~~~~~------~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~~ 147 (325)
T PLN02989 78 -CETVFHTASPVAI------TVKTDPQVELINPAVNGTINVLRTCTKVS---SVKRVILTSSMAAVLAPETKLGPNDVVD 147 (325)
T ss_pred -CCEEEEeCCCCCC------CCCCChHHHHHHHHHHHHHHHHHHHHHcC---CceEEEEecchhheecCCccCCCCCccC
Confidence 5699999996431 22334567889999999999999987753 347999999987654211
Q ss_pred -----CC-----CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc--------------ccCCC----
Q 020854 202 -----DP-----LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI--------------KRSSF---- 253 (320)
Q Consensus 202 -----~~-----~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~--------------~~~~~---- 253 (320)
.| ....|+.||.+.+.+++.++.+ .|+++..+.|+.+..|.... .....
T Consensus 148 E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~~~ 224 (325)
T PLN02989 148 ETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKD---NEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTH 224 (325)
T ss_pred cCCCCchhHhcccccchHHHHHHHHHHHHHHHHH---cCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCCCcC
Confidence 00 0246999999999999888765 37999999999997765321 00111
Q ss_pred -CCCCHHHHHHHHHHHhCCCC----cc---cCCchHHHHHHHHhhch
Q 020854 254 -FVPSTDVYARAAMRWIGYEP----CC---TPYWPHSFIWGVLSILP 292 (320)
Q Consensus 254 -~~~~~~~~a~~i~~~l~~~~----~~---~~~~~~~~~~~l~~~~P 292 (320)
.....+++|+.++..+..+. .. .+.....++..+.+.+|
T Consensus 225 r~~i~v~Dva~a~~~~l~~~~~~~~~ni~~~~~s~~ei~~~i~~~~~ 271 (325)
T PLN02989 225 HRFVDVRDVALAHVKALETPSANGRYIIDGPVVTIKDIENVLREFFP 271 (325)
T ss_pred cCeeEHHHHHHHHHHHhcCcccCceEEEecCCCCHHHHHHHHHHHCC
Confidence 13457999999998886542 11 12233445666666666
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.5e-18 Score=154.23 Aligned_cols=188 Identities=17% Similarity=0.126 Sum_probs=136.6
Q ss_pred cccCCCEEEEECCCCcHHHH--HHHHHHHcCCeEEEEeCCHHHH------------HHHHHHHHhhcCCceEEEEEEeCC
Q 020854 49 LRKYGSWALVTGPTDGIGKS--FAFQLAKTGLNLVLVGRNPDKL------------KDVSDSIQAKYAKTQIKSVVVDFS 114 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~a--la~~l~~~G~~Vil~~r~~~~~------------~~~~~~l~~~~~~~~~~~~~~D~~ 114 (320)
....||++||||||+|||.+ +|+.| +.|++|+++++..++. +...+.+.+. +..+..+.+|++
T Consensus 37 ~~~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~--G~~a~~i~~DVs 113 (398)
T PRK13656 37 IANGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAA--GLYAKSINGDAF 113 (398)
T ss_pred cCCCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhc--CCceEEEEcCCC
Confidence 33457999999999999999 89999 9999999988643221 1233333332 345678899999
Q ss_pred CC--cHHHHHHHHHHHcCCCeEEEEEccCCCCCcc-------------------cc-------------ccCCCHHHHHH
Q 020854 115 GD--LDEGVERIKEAIEGLDVGVLINNVGISYPYA-------------------RF-------------FHEVDQVLLKN 160 (320)
Q Consensus 115 ~~--~~~~~~~~~~~~~~~~id~lI~nAG~~~~~~-------------------~~-------------~~~~~~~~~~~ 160 (320)
++ +++.++.+.+.+++ +|+||||+|...... +. +...+.++++.
T Consensus 114 s~E~v~~lie~I~e~~G~--IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~ 191 (398)
T PRK13656 114 SDEIKQKVIELIKQDLGQ--VDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIAD 191 (398)
T ss_pred CHHHHHHHHHHHHHhcCC--CCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHH
Confidence 85 35667777777775 559999999874311 00 01244555555
Q ss_pred HHHHHhHHH---HHHH--HHHhHhhhcCCCcEEEEEcCccccccCCCCCc--hhhHHHHHHHHHHHHHHHHHHccCCceE
Q 020854 161 LIKVNVEGT---TKVT--QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY--SVYAATKAYIDQFSRSLYVEYRKSGIDV 233 (320)
Q Consensus 161 ~~~~N~~g~---~~l~--~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~--~~Y~asKaal~~~~~~l~~el~~~gi~v 233 (320)
+ ++++|. ...+ +...+.| .+++++|..|...+.. ..|.+ ..-+.+|++++.-++.|+.+|++.|||+
T Consensus 192 T--v~vMggedw~~Wi~al~~a~ll--a~g~~~va~TY~G~~~--t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~gira 265 (398)
T PRK13656 192 T--VKVMGGEDWELWIDALDEAGVL--AEGAKTVAYSYIGPEL--THPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDA 265 (398)
T ss_pred H--HHhhccchHHHHHHHHHhcccc--cCCcEEEEEecCCcce--eecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEE
Confidence 5 345555 2333 3334444 4679999999988877 55666 4789999999999999999999999999
Q ss_pred EEEeccceecCCCc
Q 020854 234 QCQVPLYVATKMAS 247 (320)
Q Consensus 234 ~~v~PG~v~T~~~~ 247 (320)
|++++|.+.|.-..
T Consensus 266 n~i~~g~~~T~Ass 279 (398)
T PRK13656 266 YVSVLKAVVTQASS 279 (398)
T ss_pred EEEecCcccchhhh
Confidence 99999999998765
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.6e-16 Score=143.98 Aligned_cols=220 Identities=11% Similarity=0.040 Sum_probs=148.3
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHH--HHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD--KLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
-.+|+++||||+|+||++++++|+++|++|++++|+.+ +..+....+... +.++..+.+|++|. + .+.+.+
T Consensus 4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~--~---~~~~~l 76 (297)
T PLN02583 4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCE--EERLKVFDVDPLDY--H---SILDAL 76 (297)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccC--CCceEEEEecCCCH--H---HHHHHH
Confidence 34789999999999999999999999999999999643 222222322211 23577888999986 3 333444
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC-C-C----
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP-S-D---- 202 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~-~-~---- 202 (320)
.. .|.++|.++.... .+ +.+++++++|+.|+.++++++.+.+ +.++||++||.++.... . .
T Consensus 77 ~~--~d~v~~~~~~~~~-------~~-~~~~~~~~~nv~gt~~ll~aa~~~~---~v~riV~~SS~~a~~~~~~~~~~~~ 143 (297)
T PLN02583 77 KG--CSGLFCCFDPPSD-------YP-SYDEKMVDVEVRAAHNVLEACAQTD---TIEKVVFTSSLTAVIWRDDNISTQK 143 (297)
T ss_pred cC--CCEEEEeCccCCc-------cc-ccHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEecchHheecccccCCCCC
Confidence 44 4488876653221 11 1357889999999999999987753 24699999998765310 0 0
Q ss_pred ------CC--------chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc------c------cCCCCCC
Q 020854 203 ------PL--------YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI------K------RSSFFVP 256 (320)
Q Consensus 203 ------~~--------~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~------~------~~~~~~~ 256 (320)
+. ...|+.||...+.++..++.+ .|+++++|.|+.|..|.... . .......
T Consensus 144 ~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~gi~~v~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~v 220 (297)
T PLN02583 144 DVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD---RGVNMVSINAGLLMGPSLTQHNPYLKGAAQMYENGVLVTV 220 (297)
T ss_pred CCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH---hCCcEEEEcCCcccCCCCCCchhhhcCCcccCcccCcceE
Confidence 00 015999998888888777654 48999999999998775321 0 0111256
Q ss_pred CHHHHHHHHHHHhCCC----Ccc-cCC---chHHHHHHHHhhchH
Q 020854 257 STDVYARAAMRWIGYE----PCC-TPY---WPHSFIWGVLSILPE 293 (320)
Q Consensus 257 ~~~~~a~~i~~~l~~~----~~~-~~~---~~~~~~~~l~~~~P~ 293 (320)
..+++|+..+.+++.+ +.. ... ....+..++.+..|.
T Consensus 221 ~V~Dva~a~~~al~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~p~ 265 (297)
T PLN02583 221 DVNFLVDAHIRAFEDVSSYGRYLCFNHIVNTEEDAVKLAQMLSPL 265 (297)
T ss_pred EHHHHHHHHHHHhcCcccCCcEEEecCCCccHHHHHHHHHHhCCC
Confidence 7899999999999754 322 212 123355666777775
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.1e-17 Score=136.95 Aligned_cols=143 Identities=17% Similarity=0.225 Sum_probs=111.4
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
+++++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +.....+.+|+++. +++.++++.
T Consensus 11 ~~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~v~~~~ 88 (169)
T PRK06720 11 KMKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNL--GGEALFVSYDMEKQGDWQRVISITL 88 (169)
T ss_pred ccccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence 45578999999999999999999999999999999999998888777777643 34567789999874 245556666
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-------CcEEEEEcCccccc
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-------KGAIVNIGSGAAIV 198 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-------~g~Iv~vsS~~~~~ 198 (320)
+.+++ +|++|||||.... ..++.+.+.++ ++ .+|+.+++..++.+.+.|.+++ .||+..|||.+..+
T Consensus 89 ~~~G~--iDilVnnAG~~~~-~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (169)
T PRK06720 89 NAFSR--IDMLFQNAGLYKI-DSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQSF 162 (169)
T ss_pred HHcCC--CCEEEECCCcCCC-CCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccccc
Confidence 66665 5699999998764 34555555554 33 6777888889999999887653 58999999977754
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.1e-16 Score=144.69 Aligned_cols=223 Identities=16% Similarity=0.160 Sum_probs=152.0
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
..||+++||||+|+||.+++++|+++|++|+++.|+.++.+...+..........+.++.+|++|. +.++++. .+
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~---~~ 77 (322)
T PLN02986 3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEE--SSFEQAI---EG 77 (322)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCc--chHHHHH---hC
Confidence 358999999999999999999999999999999998765443322222111124578889999986 3333333 33
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccc-c-CCC------
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV-I-PSD------ 202 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~-~-~~~------ 202 (320)
+|+|||+||.... . . . +...+++++|+.|+.++++++... .+.++||++||.++.. . ++.
T Consensus 78 --~d~vih~A~~~~~--~-~--~--~~~~~~~~~nv~gt~~ll~~~~~~---~~v~rvV~~SS~~~~~~~~~~~~~~~~~ 145 (322)
T PLN02986 78 --CDAVFHTASPVFF--T-V--K--DPQTELIDPALKGTINVLNTCKET---PSVKRVILTSSTAAVLFRQPPIEANDVV 145 (322)
T ss_pred --CCEEEEeCCCcCC--C-C--C--CchhhhhHHHHHHHHHHHHHHHhc---CCccEEEEecchhheecCCccCCCCCCc
Confidence 5699999996432 1 1 1 123567899999999999986532 2346899999987532 1 000
Q ss_pred -------C-----CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc--------------ccCC----
Q 020854 203 -------P-----LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI--------------KRSS---- 252 (320)
Q Consensus 203 -------~-----~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~--------------~~~~---- 252 (320)
| ....|+.||.+.+.+++.+..+ .|+++.++.|+.+-+|.... ..+.
T Consensus 146 ~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~ 222 (322)
T PLN02986 146 DETFFSDPSLCRETKNWYPLSKILAENAAWEFAKD---NGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNR 222 (322)
T ss_pred CcccCCChHHhhccccchHHHHHHHHHHHHHHHHH---hCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCCCCc
Confidence 1 1356999999998888877665 38999999999998875321 0110
Q ss_pred -CCCCCHHHHHHHHHHHhCCCC----c---ccCCchHHHHHHHHhhchH
Q 020854 253 -FFVPSTDVYARAAMRWIGYEP----C---CTPYWPHSFIWGVLSILPE 293 (320)
Q Consensus 253 -~~~~~~~~~a~~i~~~l~~~~----~---~~~~~~~~~~~~l~~~~P~ 293 (320)
......+++|+.++..+..+. . ..+.....++..+.+.+|+
T Consensus 223 ~~~~v~v~Dva~a~~~al~~~~~~~~yni~~~~~s~~e~~~~i~~~~~~ 271 (322)
T PLN02986 223 FYRFVDVRDVALAHIKALETPSANGRYIIDGPIMSVNDIIDILRELFPD 271 (322)
T ss_pred CcceeEHHHHHHHHHHHhcCcccCCcEEEecCCCCHHHHHHHHHHHCCC
Confidence 124688999999999887542 1 1122344566667777774
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.4e-17 Score=149.80 Aligned_cols=210 Identities=18% Similarity=0.062 Sum_probs=137.5
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHH-HHHHHHHh--hcCCceEEEEEEeCCCCcHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK-DVSDSIQA--KYAKTQIKSVVVDFSGDLDEGVERIKEA 127 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~-~~~~~l~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 127 (320)
++||++|||||+|+||.+++++|+++|++|++++|+.+... ...+.+.. ...+..+.++.+|++|. +.+.++.+.
T Consensus 4 ~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~--~~~~~~~~~ 81 (340)
T PLN02653 4 PPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDA--SSLRRWLDD 81 (340)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCH--HHHHHHHHH
Confidence 45899999999999999999999999999999998754311 11122211 01134578899999986 444444443
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccccCC-----
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPS----- 201 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~~~----- 201 (320)
+ .+|+|||+||.... . ...+..+..+++|+.|+.++++++.+...+++ ..++|++||.+.+...+
T Consensus 82 ~---~~d~Vih~A~~~~~--~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E 152 (340)
T PLN02653 82 I---KPDEVYNLAAQSHV--A----VSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSE 152 (340)
T ss_pred c---CCCEEEECCcccch--h----hhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCC
Confidence 3 46799999997542 1 12233466779999999999999988764321 12788998864433111
Q ss_pred ---CCCchhhHHHHHHHHHHHHHHHHHHcc---CCceEEEEeccceecCCC-----------ccc---------cCCCCC
Q 020854 202 ---DPLYSVYAATKAYIDQFSRSLYVEYRK---SGIDVQCQVPLYVATKMA-----------SIK---------RSSFFV 255 (320)
Q Consensus 202 ---~~~~~~Y~asKaal~~~~~~l~~el~~---~gi~v~~v~PG~v~T~~~-----------~~~---------~~~~~~ 255 (320)
......|+.||.+.+.++++++.++.- .++.++.+.|+...+.+. ... ....-.
T Consensus 153 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~ 232 (340)
T PLN02653 153 TTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDW 232 (340)
T ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecc
Confidence 112567999999999999999887642 234445555654332110 000 001123
Q ss_pred CCHHHHHHHHHHHhCC
Q 020854 256 PSTDVYARAAMRWIGY 271 (320)
Q Consensus 256 ~~~~~~a~~i~~~l~~ 271 (320)
...+++|+.++..+..
T Consensus 233 i~v~D~a~a~~~~~~~ 248 (340)
T PLN02653 233 GFAGDYVEAMWLMLQQ 248 (340)
T ss_pred eeHHHHHHHHHHHHhc
Confidence 5788899998888765
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.5e-15 Score=134.19 Aligned_cols=197 Identities=21% Similarity=0.141 Sum_probs=134.5
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.++++++||||||+||++++++|+++|++|+++.|+.++.++... . +..+.++.+|+.|.. +.+.+.++.
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----~--~~~~~~~~~Dl~d~~----~~l~~~~~~ 84 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP----Q--DPSLQIVRADVTEGS----DKLVEAIGD 84 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc----c--CCceEEEEeeCCCCH----HHHHHHhhc
Confidence 557999999999999999999999999999999999876543221 1 235788899998742 233444421
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccccc-CCCCCchhhH
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI-PSDPLYSVYA 209 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~-~~~~~~~~Y~ 209 (320)
++|+||+|+|.... ..+. ..+++|+.++.++++++. +++.++||++||...... .+.+....|.
T Consensus 85 -~~d~vi~~~g~~~~-~~~~---------~~~~~n~~~~~~ll~a~~----~~~~~~iV~iSS~~v~g~~~~~~~~~~~~ 149 (251)
T PLN00141 85 -DSDAVICATGFRRS-FDPF---------APWKVDNFGTVNLVEACR----KAGVTRFILVSSILVNGAAMGQILNPAYI 149 (251)
T ss_pred -CCCEEEECCCCCcC-CCCC---------CceeeehHHHHHHHHHHH----HcCCCEEEEEccccccCCCcccccCcchh
Confidence 36699999986432 1111 113678888888888863 456689999999864321 1223345577
Q ss_pred HHHHHHHHHHHHHHHH--HccCCceEEEEeccceecCCCccc-------cCCCCCCCHHHHHHHHHHHhCCC
Q 020854 210 ATKAYIDQFSRSLYVE--YRKSGIDVQCQVPLYVATKMASIK-------RSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 210 asKaal~~~~~~l~~e--l~~~gi~v~~v~PG~v~T~~~~~~-------~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
..|.+...+...+..| +...|+++++|.||++.++..... ......++++++|+.+...+..+
T Consensus 150 ~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~~~~~~~~~~~~~i~~~dvA~~~~~~~~~~ 221 (251)
T PLN00141 150 FLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNIVMEPEDTLYEGSISRDQVAEVAVEALLCP 221 (251)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceEEECCCCccccCcccHHHHHHHHHHHhcCh
Confidence 7665544433333333 466799999999999987754321 01123579999999999998764
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.7e-15 Score=137.16 Aligned_cols=200 Identities=19% Similarity=0.182 Sum_probs=138.7
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhh-cCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAK-YAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
+||+++||||+|.||+.++++|+++|++|++++|+..+..... .+... .....+.++.+|+.|. +.++++ +.
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~---~~- 75 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTE-HLLALDGAKERLHLFKANLLEE--GSFDSV---VD- 75 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHH-HHHhccCCCCceEEEeccccCc--chHHHH---Hc-
Confidence 4789999999999999999999999999999999865433222 22111 1123678899999986 333333 33
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccc--ccCC-------
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAI--VIPS------- 201 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~--~~~~------- 201 (320)
++|+|||+|+.... .. ..+ ...++++|+.|+.++++++.... +..+||++||.++. ...+
T Consensus 76 -~~d~Vih~A~~~~~---~~--~~~--~~~~~~~nv~gt~~ll~a~~~~~---~~~~~v~~SS~~~~~y~~~~~~~~~~~ 144 (322)
T PLN02662 76 -GCEGVFHTASPFYH---DV--TDP--QAELIDPAVKGTLNVLRSCAKVP---SVKRVVVTSSMAAVAYNGKPLTPDVVV 144 (322)
T ss_pred -CCCEEEEeCCcccC---CC--CCh--HHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEccCHHHhcCCCcCCCCCCcC
Confidence 35699999986432 11 111 24678999999999999976431 34689999997642 1100
Q ss_pred ------CCC-----chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc--------------cc-----C
Q 020854 202 ------DPL-----YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI--------------KR-----S 251 (320)
Q Consensus 202 ------~~~-----~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~--------------~~-----~ 251 (320)
.|. ...|+.||.+.+.+++.+..+ .|+++..+.|+.+.+|.... .. .
T Consensus 145 ~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (322)
T PLN02662 145 DETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKE---NGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNA 221 (322)
T ss_pred CcccCCChhHhhcccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccCCCC
Confidence 010 147999999988888777654 48999999999998875321 00 0
Q ss_pred CCCCCCHHHHHHHHHHHhCCC
Q 020854 252 SFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 252 ~~~~~~~~~~a~~i~~~l~~~ 272 (320)
.......+++|+.++..+..+
T Consensus 222 ~~~~i~v~Dva~a~~~~~~~~ 242 (322)
T PLN02662 222 SYRWVDVRDVANAHIQAFEIP 242 (322)
T ss_pred CcCeEEHHHHHHHHHHHhcCc
Confidence 112578899999999988764
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.2e-15 Score=145.29 Aligned_cols=183 Identities=16% Similarity=0.063 Sum_probs=126.7
Q ss_pred cccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHH---H----H---------HHHHHHHHhhcCCceEEEEE
Q 020854 47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD---K----L---------KDVSDSIQAKYAKTQIKSVV 110 (320)
Q Consensus 47 ~~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~---~----~---------~~~~~~l~~~~~~~~~~~~~ 110 (320)
..-++++++++||||+|+||+.++++|+++|++|+++++... + . .+..+.+... .+..+.++.
T Consensus 41 ~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~~v~ 119 (442)
T PLN02572 41 SSSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEV-SGKEIELYV 119 (442)
T ss_pred CCccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHh-hCCcceEEE
Confidence 344577999999999999999999999999999999875321 0 0 0011111111 123578889
Q ss_pred EeCCCCcHHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEE
Q 020854 111 VDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVN 190 (320)
Q Consensus 111 ~D~~~~~~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~ 190 (320)
+|++|. +.+.++.+. .++|+|||+|+... .+....++++.+..+++|+.|+.++++++...- ...++|+
T Consensus 120 ~Dl~d~--~~v~~~l~~---~~~D~ViHlAa~~~---~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g---v~~~~V~ 188 (442)
T PLN02572 120 GDICDF--EFLSEAFKS---FEPDAVVHFGEQRS---APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA---PDCHLVK 188 (442)
T ss_pred CCCCCH--HHHHHHHHh---CCCCEEEECCCccc---ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC---CCccEEE
Confidence 999976 444444443 35779999997643 223344556677888999999999999976531 1248999
Q ss_pred EcCccccccC----------------------CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecC
Q 020854 191 IGSGAAIVIP----------------------SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATK 244 (320)
Q Consensus 191 vsS~~~~~~~----------------------~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~ 244 (320)
+||.+.+..+ +......|+.||.+.+.+.+..+.. .|+++..+.|+.+-.|
T Consensus 189 ~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~---~gl~~v~lR~~~vyGp 261 (442)
T PLN02572 189 LGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGV 261 (442)
T ss_pred EecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHh---cCCCEEEEecccccCC
Confidence 9998654311 0112357999999998888876654 5899999999888655
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.2e-15 Score=141.48 Aligned_cols=201 Identities=17% Similarity=0.161 Sum_probs=141.1
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.+|++|||||+|.||.+++++|+++|++|++++|+.++...........+....+.++..|++|. +.++++. .
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~--~~~~~~~---~-- 76 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVE--GSFDDAI---R-- 76 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCCh--hhHHHHH---h--
Confidence 35789999999999999999999999999999998766554433221111123578889999886 3333333 3
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC--CCC------
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP--SDP------ 203 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~--~~~------ 203 (320)
++|.|||+|+.... ...+ ..+..+++|+.|+.++++++.+.. ..++||++||....... ..+
T Consensus 77 ~~d~ViH~A~~~~~-----~~~~--~~~~~~~~Nv~gt~~ll~aa~~~~---~~~r~v~~SS~~~~~~~~~~~~~~~E~~ 146 (351)
T PLN02650 77 GCTGVFHVATPMDF-----ESKD--PENEVIKPTVNGMLSIMKACAKAK---TVRRIVFTSSAGTVNVEEHQKPVYDEDC 146 (351)
T ss_pred CCCEEEEeCCCCCC-----CCCC--chhhhhhHHHHHHHHHHHHHHhcC---CceEEEEecchhhcccCCCCCCccCccc
Confidence 35699999986421 1112 235678999999999999987642 13689999998543210 000
Q ss_pred ------------CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc---------------cc------
Q 020854 204 ------------LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI---------------KR------ 250 (320)
Q Consensus 204 ------------~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~---------------~~------ 250 (320)
....|+.||.+.+.+++.++.+ .|+++..+.|+.+..|.... ..
T Consensus 147 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (351)
T PLN02650 147 WSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAE---NGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSII 223 (351)
T ss_pred CCchhhhhccccccchHHHHHHHHHHHHHHHHHH---cCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccCcC
Confidence 1237999999999999888766 58999999999998874311 00
Q ss_pred CCCCCCCHHHHHHHHHHHhCCC
Q 020854 251 SSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 251 ~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
........+++++.++..+..+
T Consensus 224 ~~r~~v~V~Dva~a~~~~l~~~ 245 (351)
T PLN02650 224 KQGQFVHLDDLCNAHIFLFEHP 245 (351)
T ss_pred CCcceeeHHHHHHHHHHHhcCc
Confidence 0113468899999999888654
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.8e-15 Score=140.32 Aligned_cols=224 Identities=14% Similarity=0.100 Sum_probs=152.7
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.++++|||||+|+||..++++|+++|++|++++|+.++.+...+.+.. ...+.++.+|++|. +.+.++ +.
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~--~~~~~~---~~-- 78 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE---GDRLRLFRADLQEE--GSFDEA---VK-- 78 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc---CCeEEEEECCCCCH--HHHHHH---Hc--
Confidence 468899999999999999999999999999999987765554444322 34678889999986 333333 33
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHH--HHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCC--------
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLL--KNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS-------- 201 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~-------- 201 (320)
++|+|||+||...... .....+++.+ ..++++|+.|+.++++++.+.. ..++||++||.+.+..++
T Consensus 79 ~~d~Vih~A~~~~~~~-~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~~~~~v~~SS~~vyg~~~~~~~~~~~ 154 (353)
T PLN02896 79 GCDGVFHVAASMEFDV-SSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---TVKRVVFTSSISTLTAKDSNGRWRAV 154 (353)
T ss_pred CCCEEEECCccccCCc-cccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---CccEEEEEechhhccccccCCCCCCc
Confidence 3569999999754311 1112233332 4577888899999999986532 246899999976653110
Q ss_pred ------C---------CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc---------------ccC
Q 020854 202 ------D---------PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI---------------KRS 251 (320)
Q Consensus 202 ------~---------~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~---------------~~~ 251 (320)
. +....|+.||.+.+.+++.++.+ .|+++.++.|+.+-.|.... ...
T Consensus 155 ~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~ 231 (353)
T PLN02896 155 VDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKE---NGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSK 231 (353)
T ss_pred cCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCcc
Confidence 0 11237999999999999887765 37999999998877764210 000
Q ss_pred C-------------CCCCCHHHHHHHHHHHhCCCC----cc---cCCchHHHHHHHHhhch
Q 020854 252 S-------------FFVPSTDVYARAAMRWIGYEP----CC---TPYWPHSFIWGVLSILP 292 (320)
Q Consensus 252 ~-------------~~~~~~~~~a~~i~~~l~~~~----~~---~~~~~~~~~~~l~~~~P 292 (320)
. ......+++|+.++..+..+. .. .+.....++..+.+.+|
T Consensus 232 ~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~~~~~~~~~~~~~~~s~~el~~~i~~~~~ 292 (353)
T PLN02896 232 LFSILSAVNSRMGSIALVHIEDICDAHIFLMEQTKAEGRYICCVDSYDMSELINHLSKEYP 292 (353)
T ss_pred ccccccccccccCceeEEeHHHHHHHHHHHHhCCCcCccEEecCCCCCHHHHHHHHHHhCC
Confidence 0 023588999999999886441 11 23345556666666665
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.5e-15 Score=138.56 Aligned_cols=201 Identities=19% Similarity=0.226 Sum_probs=138.9
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.++++++||||+|+||+.++++|+++|++|++++|+.+....... +........+.++.+|++|. +.+.+ .+++
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~--~~~~~---~~~~ 80 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH-LRALQELGDLKIFGADLTDE--ESFEA---PIAG 80 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH-HHhcCCCCceEEEEcCCCCh--HHHHH---HHhc
Confidence 347899999999999999999999999999999888654332221 11100012577889999986 33333 3333
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC----------
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------- 200 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~---------- 200 (320)
+|+|||+|+... ... .+.....+++|+.|+.++++++.+. .+.++||++||.+.+...
T Consensus 81 --~d~vih~A~~~~-----~~~--~~~~~~~~~~nv~g~~~ll~a~~~~---~~~~~~v~~SS~~~~g~~~~~~~~~~~~ 148 (338)
T PLN00198 81 --CDLVFHVATPVN-----FAS--EDPENDMIKPAIQGVHNVLKACAKA---KSVKRVILTSSAAAVSINKLSGTGLVMN 148 (338)
T ss_pred --CCEEEEeCCCCc-----cCC--CChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeecceeeeccCCCCCCceec
Confidence 569999998532 111 1223567899999999999997653 235699999998765310
Q ss_pred ------------CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc---------------ccc---
Q 020854 201 ------------SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS---------------IKR--- 250 (320)
Q Consensus 201 ------------~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~---------------~~~--- 250 (320)
..+....|+.||.+.+.+++.++.+ .|+++..+.|+.+-.|-.. ...
T Consensus 149 E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~ 225 (338)
T PLN00198 149 EKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLI 225 (338)
T ss_pred cccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHh---cCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCcccc
Confidence 0122456999999999999888765 4799999999988776311 000
Q ss_pred ---C-------CCCCCCHHHHHHHHHHHhCCC
Q 020854 251 ---S-------SFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 251 ---~-------~~~~~~~~~~a~~i~~~l~~~ 272 (320)
. .......+++++.++..+..+
T Consensus 226 ~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~~ 257 (338)
T PLN00198 226 NGLKGMQMLSGSISITHVEDVCRAHIFLAEKE 257 (338)
T ss_pred ccccccccccCCcceeEHHHHHHHHHHHhhCc
Confidence 0 013478899999998887654
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.1e-15 Score=141.90 Aligned_cols=172 Identities=22% Similarity=0.279 Sum_probs=144.5
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
++||+++||||+|.||.++++++++.+. ++++.+|++.++.....++++.++..+..++-+|+.|. +.+.+.+.
T Consensus 248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~-----~~~~~~~~ 322 (588)
T COG1086 248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDR-----DRVERAME 322 (588)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccH-----HHHHHHHh
Confidence 6799999999999999999999999986 79999999999999999999988888999999999987 56666666
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhH
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA 209 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~ 209 (320)
+.++|+|+|.|+.-. -|.-+..+ .+.+.+|++|+.++++++.. .+-.++|++|+--+.. | ...|+
T Consensus 323 ~~kvd~VfHAAA~KH---VPl~E~nP---~Eai~tNV~GT~nv~~aa~~----~~V~~~V~iSTDKAV~--P---tNvmG 387 (588)
T COG1086 323 GHKVDIVFHAAALKH---VPLVEYNP---EEAIKTNVLGTENVAEAAIK----NGVKKFVLISTDKAVN--P---TNVMG 387 (588)
T ss_pred cCCCceEEEhhhhcc---CcchhcCH---HHHHHHhhHhHHHHHHHHHH----hCCCEEEEEecCcccC--C---chHhh
Confidence 667889999998744 23334443 56679999999999999865 4456799999988876 2 46799
Q ss_pred HHHHHHHHHHHHHHHHHccCCceEEEEecccee
Q 020854 210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVA 242 (320)
Q Consensus 210 asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~ 242 (320)
+||...+.++.+++.+....+-++.+|.=|.|-
T Consensus 388 aTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVl 420 (588)
T COG1086 388 ATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVL 420 (588)
T ss_pred HHHHHHHHHHHHHhhccCCCCcEEEEEEeccee
Confidence 999999999999998776556788888888763
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.3e-15 Score=141.24 Aligned_cols=203 Identities=15% Similarity=0.033 Sum_probs=135.3
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEE-EEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLV-LVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vi-l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
++++||||+|+||.+++++|.++|++++ +.++.... ... ..+........+.++.+|++|. +.++++.+. .+
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~Dl~d~--~~~~~~~~~---~~ 74 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GNL-MSLAPVAQSERFAFEKVDICDR--AELARVFTE---HQ 74 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cch-hhhhhcccCCceEEEECCCcCh--HHHHHHHhh---cC
Confidence 5799999999999999999999998755 45554321 111 1111111133577788999986 444444433 34
Q ss_pred eEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhh---c--CCCcEEEEEcCcccccc--------
Q 020854 133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGML---K--RKKGAIVNIGSGAAIVI-------- 199 (320)
Q Consensus 133 id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~---~--~~~g~Iv~vsS~~~~~~-------- 199 (320)
+|+|||+||.... +.+.+..+..+++|+.|+.++++++.+.+. . .+..++|++||.+.+..
T Consensus 75 ~D~Vih~A~~~~~------~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~ 148 (355)
T PRK10217 75 PDCVMHLAAESHV------DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFF 148 (355)
T ss_pred CCEEEECCcccCc------chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCc
Confidence 7799999996532 223445688999999999999999987532 1 12358999999653220
Q ss_pred ---CCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc--------------ccc--------CCCC
Q 020854 200 ---PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS--------------IKR--------SSFF 254 (320)
Q Consensus 200 ---~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~--------------~~~--------~~~~ 254 (320)
.+....+.|+.||.+.+.+++.++.++ |+++..+.|+.+-.|-.. ... ....
T Consensus 149 ~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~ 225 (355)
T PRK10217 149 TETTPYAPSSPYSASKASSDHLVRAWLRTY---GLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRD 225 (355)
T ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeC
Confidence 012235789999999999999987774 677777777666443310 000 0112
Q ss_pred CCCHHHHHHHHHHHhCCC
Q 020854 255 VPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 255 ~~~~~~~a~~i~~~l~~~ 272 (320)
+...+++++.++..+..+
T Consensus 226 ~i~v~D~a~a~~~~~~~~ 243 (355)
T PRK10217 226 WLYVEDHARALYCVATTG 243 (355)
T ss_pred cCcHHHHHHHHHHHHhcC
Confidence 578899999998887654
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.3e-15 Score=139.41 Aligned_cols=173 Identities=17% Similarity=0.178 Sum_probs=118.5
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhc--CCceEEEEEEeCCCCcHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKY--AKTQIKSVVVDFSGDLDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~ 127 (320)
.+++|+++||||+|+||.+++++|+++|++|++++|......+..+.+.... ....+..+.+|++|. +.++.+.+.
T Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~l~~~~~~ 79 (352)
T PLN02240 2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDK--EALEKVFAS 79 (352)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCH--HHHHHHHHh
Confidence 4568999999999999999999999999999999875433222222222211 123577888999876 344443332
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC-------
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP------- 200 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~------- 200 (320)
.++|+|||+||.... ..+.+.....+++|+.++.++++++ .+.+.+++|++||...+..+
T Consensus 80 ---~~~d~vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~E 146 (352)
T PLN02240 80 ---TRFDAVIHFAGLKAV------GESVAKPLLYYDNNLVGTINLLEVM----AKHGCKKLVFSSSATVYGQPEEVPCTE 146 (352)
T ss_pred ---CCCCEEEEccccCCc------cccccCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEccHHHhCCCCCCCCCC
Confidence 357799999997532 1122345778999999999998865 33445689999996543210
Q ss_pred --CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEecc
Q 020854 201 --SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPL 239 (320)
Q Consensus 201 --~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG 239 (320)
+......|+.||.+.+.+.+.++.+ ..++.+..+.|+
T Consensus 147 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~~R~~ 185 (352)
T PLN02240 147 EFPLSATNPYGRTKLFIEEICRDIHAS--DPEWKIILLRYF 185 (352)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHh--cCCCCEEEEeec
Confidence 1123568999999999999988755 235666666643
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.6e-15 Score=140.12 Aligned_cols=206 Identities=18% Similarity=0.104 Sum_probs=131.5
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHH-----HHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK-----LKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
|++|||||+|+||.+++++|+++|++|++++|+.+. ++...+.... ..+..+.++.+|++|. +.+.++.+
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~--~~l~~~~~-- 75 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHN-VNKARMKLHYGDLTDS--SNLRRIID-- 75 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhcccc-ccccceeEEEeccCCH--HHHHHHHH--
Confidence 689999999999999999999999999999997542 2221111110 0123578899999986 44444433
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC--------
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP-------- 200 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~-------- 200 (320)
..++|+|||+|+.... . ...+.-...+++|+.|+.++++++.+.-.+ +..++|++||.+.+..+
T Consensus 76 -~~~~d~ViH~Aa~~~~--~----~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~E~ 147 (343)
T TIGR01472 76 -EIKPTEIYNLAAQSHV--K----VSFEIPEYTADVDGIGTLRLLEAVRTLGLI-KSVKFYQASTSELYGKVQEIPQNET 147 (343)
T ss_pred -hCCCCEEEECCccccc--c----hhhhChHHHHHHHHHHHHHHHHHHHHhCCC-cCeeEEEeccHHhhCCCCCCCCCCC
Confidence 3346799999997542 1 111122556789999999999998764211 12479999997543310
Q ss_pred -CCCCchhhHHHHHHHHHHHHHHHHHHcc---CCceEEEEeccceecCCCc-----------cc---------cCCCCCC
Q 020854 201 -SDPLYSVYAATKAYIDQFSRSLYVEYRK---SGIDVQCQVPLYVATKMAS-----------IK---------RSSFFVP 256 (320)
Q Consensus 201 -~~~~~~~Y~asKaal~~~~~~l~~el~~---~gi~v~~v~PG~v~T~~~~-----------~~---------~~~~~~~ 256 (320)
+......|+.||.+.+.+++.++.++.- .++.++...|+.-..-+.. .. ....-..
T Consensus 148 ~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i 227 (343)
T TIGR01472 148 TPFYPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWG 227 (343)
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCce
Confidence 1123568999999999999999887521 1223344445421110100 00 0112246
Q ss_pred CHHHHHHHHHHHhCCC
Q 020854 257 STDVYARAAMRWIGYE 272 (320)
Q Consensus 257 ~~~~~a~~i~~~l~~~ 272 (320)
..+++++.++..+..+
T Consensus 228 ~V~D~a~a~~~~~~~~ 243 (343)
T TIGR01472 228 HAKDYVEAMWLMLQQD 243 (343)
T ss_pred eHHHHHHHHHHHHhcC
Confidence 8899999998887654
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.9e-14 Score=128.64 Aligned_cols=223 Identities=19% Similarity=0.115 Sum_probs=151.5
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHH--HHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV--SDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~--~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
.+++|+||||||-||..++++|+++|+.|..+.|++++.+.. ..++. +...+...+..|+.|. +.+.+.+.
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~--~a~~~l~l~~aDL~d~-----~sf~~ai~ 77 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLE--GAKERLKLFKADLLDE-----GSFDKAID 77 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcc--cCcccceEEecccccc-----chHHHHHh
Confidence 579999999999999999999999999999999999884443 33332 3345699999999998 44555555
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCC-CC----
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD-PL---- 204 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~-~~---- 204 (320)
+.+ +|+|.|..... ...+ .-.++++.++.|+.++.+++... ..-.|||++||.++...++. .+
T Consensus 78 gcd--gVfH~Asp~~~-----~~~~--~e~~li~pav~Gt~nVL~ac~~~---~sVkrvV~TSS~aAv~~~~~~~~~~~v 145 (327)
T KOG1502|consen 78 GCD--GVFHTASPVDF-----DLED--PEKELIDPAVKGTKNVLEACKKT---KSVKRVVYTSSTAAVRYNGPNIGENSV 145 (327)
T ss_pred CCC--EEEEeCccCCC-----CCCC--cHHhhhhHHHHHHHHHHHHHhcc---CCcceEEEeccHHHhccCCcCCCCCcc
Confidence 555 99999986542 1112 22468899999999999998542 13578999999999873211 00
Q ss_pred -------chhhHHHHHHHH----HHHHHHHHHHcc-CCceEEEEeccceecCCCcc------------------ccC--C
Q 020854 205 -------YSVYAATKAYID----QFSRSLYVEYRK-SGIDVQCQVPLYVATKMASI------------------KRS--S 252 (320)
Q Consensus 205 -------~~~Y~asKaal~----~~~~~l~~el~~-~gi~v~~v~PG~v~T~~~~~------------------~~~--~ 252 (320)
-..|+.++.... .+++-.|.+++. .|+....|+||+|-.|.... ..+ .
T Consensus 146 vdE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~ 225 (327)
T KOG1502|consen 146 VDEESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFW 225 (327)
T ss_pred cccccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCc
Confidence 112333333222 344444555553 46999999999998876541 011 1
Q ss_pred CCCCCHHHHHHHHHHHhCCC----Ccc-cCCc--hHHHHHHHHhhchH
Q 020854 253 FFVPSTDVYARAAMRWIGYE----PCC-TPYW--PHSFIWGVLSILPE 293 (320)
Q Consensus 253 ~~~~~~~~~a~~i~~~l~~~----~~~-~~~~--~~~~~~~l~~~~P~ 293 (320)
....+.+++|++.+.+++.+ |+. .... .-.++..+...+|.
T Consensus 226 ~~~VdVrDVA~AHv~a~E~~~a~GRyic~~~~~~~~ei~~~l~~~~P~ 273 (327)
T KOG1502|consen 226 LAFVDVRDVALAHVLALEKPSAKGRYICVGEVVSIKEIADILRELFPD 273 (327)
T ss_pred eeeEeHHHHHHHHHHHHcCcccCceEEEecCcccHHHHHHHHHHhCCC
Confidence 12478999999999999876 332 2222 22456666666664
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.67 E-value=9.7e-15 Score=134.94 Aligned_cols=215 Identities=18% Similarity=0.158 Sum_probs=147.3
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV-SDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~-~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
+++++++||||+|+||++++++|+++|++|++++|+.++.... .+++.. ...++.++.+|++|. +.++++ +.
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~--~~~~~~---~~ 80 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEG--GKERLILCKADLQDY--EALKAA---ID 80 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhC--CCCcEEEEecCcCCh--HHHHHH---Hh
Confidence 5689999999999999999999999999999999987653321 122221 123577888999876 333333 33
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccccc-CC-CC----
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI-PS-DP---- 203 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~-~~-~~---- 203 (320)
+ +|+|||+||.... ...+.+++|+.|+.++++++.. .+.++||++||.++... +. .+
T Consensus 81 ~--~d~Vih~A~~~~~-----------~~~~~~~~nv~gt~~ll~aa~~----~~v~r~V~~SS~~avyg~~~~~~~~~~ 143 (342)
T PLN02214 81 G--CDGVFHTASPVTD-----------DPEQMVEPAVNGAKFVINAAAE----AKVKRVVITSSIGAVYMDPNRDPEAVV 143 (342)
T ss_pred c--CCEEEEecCCCCC-----------CHHHHHHHHHHHHHHHHHHHHh----cCCCEEEEeccceeeeccCCCCCCccc
Confidence 3 5699999985321 2356789999999999999764 34468999999754331 00 00
Q ss_pred -------------CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc---------------cccC----
Q 020854 204 -------------LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS---------------IKRS---- 251 (320)
Q Consensus 204 -------------~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~---------------~~~~---- 251 (320)
....|+.||.+.+.++..++.+ .|+++..+.|+.|-.|-.. ....
T Consensus 144 ~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~---~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~ 220 (342)
T PLN02214 144 DESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKE---KGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYAN 220 (342)
T ss_pred CcccCCChhhccccccHHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCC
Confidence 1347999999999998887665 3899999999988665321 0000
Q ss_pred -CCCCCCHHHHHHHHHHHhCCCC----c--c-cCCchHHHHHHHHhhch
Q 020854 252 -SFFVPSTDVYARAAMRWIGYEP----C--C-TPYWPHSFIWGVLSILP 292 (320)
Q Consensus 252 -~~~~~~~~~~a~~i~~~l~~~~----~--~-~~~~~~~~~~~l~~~~P 292 (320)
.......+++|+.++.++..+. . . .+.....++..+.+.+|
T Consensus 221 ~~~~~i~V~Dva~a~~~al~~~~~~g~yn~~~~~~~~~el~~~i~~~~~ 269 (342)
T PLN02214 221 LTQAYVDVRDVALAHVLVYEAPSASGRYLLAESARHRGEVVEILAKLFP 269 (342)
T ss_pred CCcCeeEHHHHHHHHHHHHhCcccCCcEEEecCCCCHHHHHHHHHHHCC
Confidence 1124578999999999887542 1 1 12233445566666665
|
|
| >PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function | Back alignment and domain information |
|---|
Probab=99.65 E-value=6.6e-14 Score=124.32 Aligned_cols=185 Identities=17% Similarity=0.200 Sum_probs=149.4
Q ss_pred CCEEEEECC-CCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCC--CcHHHHHHHHHHHc
Q 020854 53 GSWALVTGP-TDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEAIE 129 (320)
Q Consensus 53 gk~vlITGa-s~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 129 (320)
.++|||.|. +.-|++.+|..|-++|+-|+++..+.++.+...++- ...+.....|..+ +....+.++.+.+.
T Consensus 3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~-----~~dI~~L~ld~~~~~~~~~~l~~f~~~L~ 77 (299)
T PF08643_consen 3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED-----RPDIRPLWLDDSDPSSIHASLSRFASLLS 77 (299)
T ss_pred eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc-----CCCCCCcccCCCCCcchHHHHHHHHHHhc
Confidence 478999996 799999999999999999999999988755443322 3346677777744 44677788887776
Q ss_pred CC------------CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhc---CCCcEEEEEcCc
Q 020854 130 GL------------DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK---RKKGAIVNIGSG 194 (320)
Q Consensus 130 ~~------------~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~---~~~g~Iv~vsS~ 194 (320)
.. .+..||.--....+ .+|++.++.+.|.+.++.|+..++.+++.++|+++. ++..-|++.-|+
T Consensus 78 ~p~~p~~~~~~h~l~L~svi~~Psl~yp-~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi 156 (299)
T PF08643_consen 78 RPHVPFPGAPPHHLQLKSVIFIPSLSYP-TGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSI 156 (299)
T ss_pred CCCCCCCCCCCceeEEEEEEEecCCCCC-CCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCch
Confidence 43 45566666655553 578999999999999999999999999999999987 334445555577
Q ss_pred cccccCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCC
Q 020854 195 AAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKM 245 (320)
Q Consensus 195 ~~~~~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~ 245 (320)
.+.. ..|..+.-.+...++.+|+++|++|+.+.||+|..+..|.++-.-
T Consensus 157 ~ssl--~~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~~ 205 (299)
T PF08643_consen 157 SSSL--NPPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIGN 205 (299)
T ss_pred hhcc--CCCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeecccc
Confidence 7766 568889999999999999999999999999999999999987773
|
One of the proteins P32792 from SWISSPROT has been localised to the mitochondria []. |
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.7e-15 Score=134.04 Aligned_cols=195 Identities=19% Similarity=0.253 Sum_probs=134.1
Q ss_pred EEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEE----EEEEeCCCCcHHHHHHHHHHHcC
Q 020854 56 ALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIK----SVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 56 vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~----~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
||||||+|.||.+++++|++.+. +|++++|++.++-++.+++++.+++.++. .+.+|+.|. +.+...+..
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~-----~~l~~~~~~ 75 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDK-----ERLNRIFEE 75 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHH-----HHHHHHTT-
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCH-----HHHHHHHhh
Confidence 79999999999999999999985 79999999999999999997766554443 345677665 556666666
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHH
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA 210 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~a 210 (320)
.++|+|+|.|+.-.. ++.+..+ .+.+++|++|+.++++++..+ +-.++|++|+--+.. | ...|++
T Consensus 76 ~~pdiVfHaAA~KhV---pl~E~~p---~eav~tNv~GT~nv~~aa~~~----~v~~~v~ISTDKAv~--P---tnvmGa 140 (293)
T PF02719_consen 76 YKPDIVFHAAALKHV---PLMEDNP---FEAVKTNVLGTQNVAEAAIEH----GVERFVFISTDKAVN--P---TNVMGA 140 (293)
T ss_dssp -T-SEEEE------H---HHHCCCH---HHHHHHHCHHHHHHHHHHHHT----T-SEEEEEEECGCSS-------SHHHH
T ss_pred cCCCEEEEChhcCCC---ChHHhCH---HHHHHHHHHHHHHHHHHHHHc----CCCEEEEccccccCC--C---CcHHHH
Confidence 678899999997542 3334343 567899999999999998763 456899999987765 2 468999
Q ss_pred HHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc------------------cccCCCCCCCHHHHHHHHHHHhC
Q 020854 211 TKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS------------------IKRSSFFVPSTDVYARAAMRWIG 270 (320)
Q Consensus 211 sKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~------------------~~~~~~~~~~~~~~a~~i~~~l~ 270 (320)
||...+.++.+.+......+.++.+|.=|.|--.--. .....-+.++.++.++-++.+..
T Consensus 141 tKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~~ 218 (293)
T PF02719_consen 141 TKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAAA 218 (293)
T ss_dssp HHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHHHh
Confidence 9999999999999887667788999988877332111 01112346788898888888764
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.9e-14 Score=132.53 Aligned_cols=168 Identities=17% Similarity=0.134 Sum_probs=114.2
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeE
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG 134 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 134 (320)
+++||||+|+||++++++|+++|++|++++|...........+.+. .+.++.++.+|++|. +.++++.+ ..++|
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~--~~~~~~~~---~~~~d 75 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERL-GGKHPTFVEGDIRNE--ALLTEILH---DHAID 75 (338)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHh-cCCCceEEEccCCCH--HHHHHHHh---cCCCC
Confidence 5899999999999999999999999999886533322222222221 133567788999876 44444433 23577
Q ss_pred EEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCC----------CCC
Q 020854 135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS----------DPL 204 (320)
Q Consensus 135 ~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~----------~~~ 204 (320)
+|||+||.... .. ..+.....+++|+.++.++++++ .+.+.+++|++||...+..+. ...
T Consensus 76 ~vvh~a~~~~~--~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p 145 (338)
T PRK10675 76 TVIHFAGLKAV--GE----SVQKPLEYYDNNVNGTLRLISAM----RAANVKNLIFSSSATVYGDQPKIPYVESFPTGTP 145 (338)
T ss_pred EEEECCccccc--cc----hhhCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEeccHHhhCCCCCCccccccCCCCC
Confidence 99999987542 11 11223567899999999998865 344557899999976432100 022
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccc
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLY 240 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~ 240 (320)
...|+.+|.+.+.+++.++.+. .++++..+.|+.
T Consensus 146 ~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~ilR~~~ 179 (338)
T PRK10675 146 QSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFN 179 (338)
T ss_pred CChhHHHHHHHHHHHHHHHHhc--CCCcEEEEEeee
Confidence 5789999999999999987653 346666666433
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.7e-14 Score=131.16 Aligned_cols=218 Identities=16% Similarity=0.027 Sum_probs=142.3
Q ss_pred EEEEECCCCcHHHHHHHHHHHcC--CeEEEEeCCHHH-HHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPDK-LKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G--~~Vil~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
+++||||+|+||.+++++|+++| ++|++.+|.... -.+..+.+. ....+.++.+|++|. +.++++.+. .
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~--~~~~~~~~~---~ 72 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLE---DNPRYRFVKGDIGDR--ELVSRLFTE---H 72 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhc---cCCCcEEEEcCCcCH--HHHHHHHhh---c
Confidence 48999999999999999999987 689888764311 111112221 123567788999986 444444433 3
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC----------C
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP----------S 201 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~----------~ 201 (320)
++|+|||+||.... +.+.+..+..+++|+.++.++++.+...+ .+.++|++||....... +
T Consensus 73 ~~d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~Ss~~v~g~~~~~~~~~e~~~ 143 (317)
T TIGR01181 73 QPDAVVHFAAESHV------DRSISGPAAFIETNVVGTYTLLEAVRKYW---HEFRFHHISTDEVYGDLEKGDAFTETTP 143 (317)
T ss_pred CCCEEEEcccccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHhcC---CCceEEEeeccceeCCCCCCCCcCCCCC
Confidence 47799999986532 12334456788999999999999876543 23479999996532210 1
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc--------------cccC--------CCCCCCHH
Q 020854 202 DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS--------------IKRS--------SFFVPSTD 259 (320)
Q Consensus 202 ~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~--------------~~~~--------~~~~~~~~ 259 (320)
......|+.+|.+.+.+++.++.+ .|+++.++.|+.+-.+... .... ...+...+
T Consensus 144 ~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 220 (317)
T TIGR01181 144 LAPSSPYSASKAASDHLVRAYHRT---YGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVE 220 (317)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHH---hCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHH
Confidence 112457999999999999988776 3789999999877654321 0000 01245688
Q ss_pred HHHHHHHHHhCCCC----c--cc--CCchHHHHHHHHhhch
Q 020854 260 VYARAAMRWIGYEP----C--CT--PYWPHSFIWGVLSILP 292 (320)
Q Consensus 260 ~~a~~i~~~l~~~~----~--~~--~~~~~~~~~~l~~~~P 292 (320)
++++.+...+..+. . .. +.....++..+...++
T Consensus 221 D~a~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~ 261 (317)
T TIGR01181 221 DHCRAIYLVLEKGRVGETYNIGGGNERTNLEVVETILELLG 261 (317)
T ss_pred HHHHHHHHHHcCCCCCceEEeCCCCceeHHHHHHHHHHHhC
Confidence 99999888876431 1 11 2234456666666655
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.4e-14 Score=130.32 Aligned_cols=200 Identities=17% Similarity=0.073 Sum_probs=130.8
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCe-EEEEeCCH--HHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLN-LVLVGRNP--DKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~-Vil~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
+++||||+|+||.+++++|+++|.+ |+.+++.. ...+... .+ .++..+.++.+|++|. +.++++.+. .
T Consensus 2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~Dl~d~--~~~~~~~~~---~ 72 (352)
T PRK10084 2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA-DV---SDSERYVFEHADICDR--AELDRIFAQ---H 72 (352)
T ss_pred eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH-hc---ccCCceEEEEecCCCH--HHHHHHHHh---c
Confidence 5899999999999999999999986 55555532 1222111 11 1234577889999986 444444433 3
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC-----CCcEEEEEcCcccccc-------
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-----KKGAIVNIGSGAAIVI------- 199 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-----~~g~Iv~vsS~~~~~~------- 199 (320)
++|+|||+||.... .. +.+..+.++++|+.|+.++++++.+.|... +..++|++||.+.+..
T Consensus 73 ~~d~vih~A~~~~~-~~-----~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~ 146 (352)
T PRK10084 73 QPDAVMHLAAESHV-DR-----SITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEV 146 (352)
T ss_pred CCCEEEECCcccCC-cc-----hhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccc
Confidence 57799999996532 11 112236678999999999999998765321 2348999999654321
Q ss_pred ------C------CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc--------------c-c---
Q 020854 200 ------P------SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS--------------I-K--- 249 (320)
Q Consensus 200 ------~------~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~--------------~-~--- 249 (320)
| +......|+.||.+.+.+++.++.++ |+++..+.|+.+-.|-.. . .
T Consensus 147 ~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~ 223 (352)
T PRK10084 147 ENSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPI 223 (352)
T ss_pred cccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEE
Confidence 0 11224689999999999999988774 566666666555433210 0 0
Q ss_pred ----cCCCCCCCHHHHHHHHHHHhCCC
Q 020854 250 ----RSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 250 ----~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
.........+++++.+...+..+
T Consensus 224 ~~~g~~~~~~v~v~D~a~a~~~~l~~~ 250 (352)
T PRK10084 224 YGKGDQIRDWLYVEDHARALYKVVTEG 250 (352)
T ss_pred eCCCCeEEeeEEHHHHHHHHHHHHhcC
Confidence 00112467889999998877643
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.6e-14 Score=129.60 Aligned_cols=170 Identities=19% Similarity=0.151 Sum_probs=118.0
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeE
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG 134 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 134 (320)
+++||||+|+||.+++++|.++|++|++++|......+....+.+ ...+..+.+|+++. +.++++.+ ..++|
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~--~~~~~~~~---~~~~d 72 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGER---ITRVTFVEGDLRDR--ELLDRLFE---EHKID 72 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcc---ccceEEEECCCCCH--HHHHHHHH---hCCCc
Confidence 379999999999999999999999999887654332222222221 11467788999876 44444443 23577
Q ss_pred EEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCC---------CCc
Q 020854 135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD---------PLY 205 (320)
Q Consensus 135 ~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~---------~~~ 205 (320)
++|||||.... .. +.+...+.+++|+.++..+++.+. +.+.+++|++||...+..+.. ...
T Consensus 73 ~vv~~ag~~~~--~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~ 142 (328)
T TIGR01179 73 AVIHFAGLIAV--GE----SVQDPLKYYRNNVVNTLNLLEAMQ----QTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPI 142 (328)
T ss_pred EEEECccccCc--ch----hhcCchhhhhhhHHHHHHHHHHHH----hcCCCEEEEecchhhcCCCCCCCccccCCCCCC
Confidence 99999997542 11 222345678899999999988754 334578999998655431110 124
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecC
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATK 244 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~ 244 (320)
..|+.+|++.+.+++.++.+ ..++++..+.|+.+-.+
T Consensus 143 ~~y~~sK~~~e~~~~~~~~~--~~~~~~~ilR~~~v~g~ 179 (328)
T TIGR01179 143 NPYGRSKLMSERILRDLSKA--DPGLSYVILRYFNVAGA 179 (328)
T ss_pred CchHHHHHHHHHHHHHHHHh--ccCCCEEEEecCcccCC
Confidence 67999999999999998765 25789999998766544
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=7.1e-14 Score=129.49 Aligned_cols=177 Identities=11% Similarity=0.020 Sum_probs=123.1
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcC---CceEEEEEEeCCCCcHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYA---KTQIKSVVVDFSGDLDEGVERI 124 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~D~~~~~~~~~~~~ 124 (320)
.+.+++|.++||||+|-||..++++|.++|++|++++|.........+......+ ..++.++.+|+.|. ..++++
T Consensus 10 ~~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~--~~l~~~ 87 (348)
T PRK15181 10 KLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKF--TDCQKA 87 (348)
T ss_pred cccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCH--HHHHHH
Confidence 4667789999999999999999999999999999999865432222222211111 13577888999875 333333
Q ss_pred HHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCC-C-
Q 020854 125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS-D- 202 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~-~- 202 (320)
+.+ +|+|||.|+.... +. +.++....+++|+.|+.++++.+.. .+-.++|++||...+...+ .
T Consensus 88 ---~~~--~d~ViHlAa~~~~---~~---~~~~~~~~~~~Nv~gt~nll~~~~~----~~~~~~v~~SS~~vyg~~~~~~ 152 (348)
T PRK15181 88 ---CKN--VDYVLHQAALGSV---PR---SLKDPIATNSANIDGFLNMLTAARD----AHVSSFTYAASSSTYGDHPDLP 152 (348)
T ss_pred ---hhC--CCEEEECccccCc---hh---hhhCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeechHhhCCCCCCC
Confidence 333 5699999997542 11 1122345689999999999998643 3446899999975543101 0
Q ss_pred -------CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecC
Q 020854 203 -------PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATK 244 (320)
Q Consensus 203 -------~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~ 244 (320)
.....|+.||.+.+.+.+..+.+ .|+++..+.|+.+-.|
T Consensus 153 ~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~vyGp 198 (348)
T PRK15181 153 KIEERIGRPLSPYAVTKYVNELYADVFARS---YEFNAIGLRYFNVFGR 198 (348)
T ss_pred CCCCCCCCCCChhhHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCc
Confidence 12457999999999988877655 4799999999888655
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.58 E-value=7.1e-14 Score=127.87 Aligned_cols=189 Identities=19% Similarity=0.170 Sum_probs=133.4
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCe
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV 133 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 133 (320)
++++||||+|+||..++++|+++|++|++++|+.++.... . ...+..+.+|+.|. +.++ +.+.. +
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~----~~~~~~~~~D~~~~--~~l~---~~~~~--~ 65 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL----E----GLDVEIVEGDLRDP--ASLR---KAVAG--C 65 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc----c----cCCceEEEeeCCCH--HHHH---HHHhC--C
Confidence 3699999999999999999999999999999987653221 1 23577889999876 3333 33333 5
Q ss_pred EEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCC-----------
Q 020854 134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD----------- 202 (320)
Q Consensus 134 d~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~----------- 202 (320)
|+|||+|+.... ..+..+..+++|+.++.++++++.. .+.+++|++||.......+.
T Consensus 66 d~vi~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~ 133 (328)
T TIGR03466 66 RALFHVAADYRL--------WAPDPEEMYAANVEGTRNLLRAALE----AGVERVVYTSSVATLGVRGDGTPADETTPSS 133 (328)
T ss_pred CEEEEeceeccc--------CCCCHHHHHHHHHHHHHHHHHHHHH----hCCCeEEEEechhhcCcCCCCCCcCccCCCC
Confidence 699999985321 1112466788999999999998654 34569999999766541000
Q ss_pred --CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc--------------c-----cCCCCCCCHHHH
Q 020854 203 --PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI--------------K-----RSSFFVPSTDVY 261 (320)
Q Consensus 203 --~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~--------------~-----~~~~~~~~~~~~ 261 (320)
.....|+.+|.+.+.+.+.+..+ .|+++..+.|+.+-.+-... . .........+++
T Consensus 134 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~ 210 (328)
T TIGR03466 134 LDDMIGHYKRSKFLAEQAALEMAAE---KGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDV 210 (328)
T ss_pred cccccChHHHHHHHHHHHHHHHHHh---cCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHHHH
Confidence 01357999999999999888765 47999999998775442110 0 001124578999
Q ss_pred HHHHHHHhCCC
Q 020854 262 ARAAMRWIGYE 272 (320)
Q Consensus 262 a~~i~~~l~~~ 272 (320)
|+.++..+..+
T Consensus 211 a~a~~~~~~~~ 221 (328)
T TIGR03466 211 AEGHLLALERG 221 (328)
T ss_pred HHHHHHHHhCC
Confidence 99999887654
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.8e-13 Score=127.68 Aligned_cols=202 Identities=12% Similarity=0.083 Sum_probs=137.0
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhc----CCceEEEEEEeCCCCcHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKY----AKTQIKSVVVDFSGDLDEGVERIK 125 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~----~~~~~~~~~~D~~~~~~~~~~~~~ 125 (320)
..++|+++||||+|+||.+++++|+++|++|+++.|+.++.+.+ +++...+ .+..+.++.+|++|. +.+.++.
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~--~~l~~~i 126 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEP--ESLHEAF 126 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCH--HHHHHHH
Confidence 35689999999999999999999999999999999987665544 2332111 012477888999986 4344433
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccc-c----cC
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAI-V----IP 200 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~-~----~~ 200 (320)
+ . +|.++|.|+..... . .... .....++|+.++.++++++... .+-.++|++||.++. . ..
T Consensus 127 ~---~--~d~V~hlA~~~~~~-~-~~~~----~~~~~~~nv~gt~~llea~~~~---~~v~r~V~~SS~~~~vyg~~~~~ 192 (367)
T PLN02686 127 D---G--CAGVFHTSAFVDPA-G-LSGY----TKSMAELEAKASENVIEACVRT---ESVRKCVFTSSLLACVWRQNYPH 192 (367)
T ss_pred H---h--ccEEEecCeeeccc-c-cccc----cchhhhhhHHHHHHHHHHHHhc---CCccEEEEeccHHHhcccccCCC
Confidence 3 2 45888988875431 1 1011 1234567899999998886432 134589999996421 0 00
Q ss_pred C----------------CCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc------------c---
Q 020854 201 S----------------DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI------------K--- 249 (320)
Q Consensus 201 ~----------------~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~------------~--- 249 (320)
. ......|+.||.+.+.+++.++.+ .|++++++.|+.|..|-... .
T Consensus 193 ~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~~~~ 269 (367)
T PLN02686 193 DLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICPALVTGPGFFRRNSTATIAYLKGAQEM 269 (367)
T ss_pred CCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcCCceECCCCCCCCChhHHHHhcCCCcc
Confidence 0 012346999999999999887765 58999999999998884210 0
Q ss_pred -c-CCCCCCCHHHHHHHHHHHhCC
Q 020854 250 -R-SSFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 250 -~-~~~~~~~~~~~a~~i~~~l~~ 271 (320)
. ........+++++.++..+..
T Consensus 270 ~g~g~~~~v~V~Dva~A~~~al~~ 293 (367)
T PLN02686 270 LADGLLATADVERLAEAHVCVYEA 293 (367)
T ss_pred CCCCCcCeEEHHHHHHHHHHHHhc
Confidence 0 111256789999999988863
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.55 E-value=6.5e-13 Score=123.09 Aligned_cols=195 Identities=18% Similarity=0.160 Sum_probs=130.8
Q ss_pred EEEEECCCCcHHHHHHHHHHHcC--CeEEEEeCCHHHH---HHHHHHHHhhcC-----C-ceEEEEEEeCCCCc----HH
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPDKL---KDVSDSIQAKYA-----K-TQIKSVVVDFSGDL----DE 119 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G--~~Vil~~r~~~~~---~~~~~~l~~~~~-----~-~~~~~~~~D~~~~~----~~ 119 (320)
+|+||||||+||+.++++|+++| ++|+++.|+.+.. +...+.+..... . .++..+.+|+++.. .+
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 48999999999999999999999 6799999976532 222222222110 1 46888999988641 12
Q ss_pred HHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccccc
Q 020854 120 GVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI 199 (320)
Q Consensus 120 ~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~ 199 (320)
..+. ... .+|++||||+.... . ..++...++|+.|+..+++.+.. .+..+++++||......
T Consensus 81 ~~~~---~~~--~~d~vih~a~~~~~-~--------~~~~~~~~~nv~g~~~ll~~a~~----~~~~~~v~iSS~~v~~~ 142 (367)
T TIGR01746 81 EWER---LAE--NVDTIVHNGALVNW-V--------YPYSELRAANVLGTREVLRLAAS----GRAKPLHYVSTISVLAA 142 (367)
T ss_pred HHHH---HHh--hCCEEEeCCcEecc-C--------CcHHHHhhhhhHHHHHHHHHHhh----CCCceEEEEccccccCC
Confidence 2222 223 46699999996532 0 12456678999999999888654 33456999999877542
Q ss_pred CC--------------CCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc------------------
Q 020854 200 PS--------------DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS------------------ 247 (320)
Q Consensus 200 ~~--------------~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~------------------ 247 (320)
.. ......|+.||.+.+.+.+..+. .|++++.+.||.+.++...
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~ 218 (367)
T TIGR01746 143 IDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLA 218 (367)
T ss_pred cCCCCccccccccccccccCCChHHHHHHHHHHHHHHHh----cCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHH
Confidence 00 01134699999999988876543 3899999999999875211
Q ss_pred -cccC-----CCCCCCHHHHHHHHHHHhCC
Q 020854 248 -IKRS-----SFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 248 -~~~~-----~~~~~~~~~~a~~i~~~l~~ 271 (320)
...+ ...+...+++++.++..+..
T Consensus 219 ~~~~p~~~~~~~~~~~vddva~ai~~~~~~ 248 (367)
T TIGR01746 219 LGAYPDSPELTEDLTPVDYVARAIVALSSQ 248 (367)
T ss_pred hCCCCCCCccccCcccHHHHHHHHHHHHhC
Confidence 0001 12256788999998887643
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.53 E-value=8.2e-13 Score=124.08 Aligned_cols=190 Identities=14% Similarity=0.089 Sum_probs=129.3
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHH--HHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD--VSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~--~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
.++++++||||||+||+.++++|+++|++|++++|+..+.+. ..++.... ...+..+.+|++|. +.++++.+..
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~--~~~v~~v~~Dl~d~--~~l~~~~~~~ 133 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKE--LPGAEVVFGDVTDA--DSLRKVLFSE 133 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhh--cCCceEEEeeCCCH--HHHHHHHHHh
Confidence 457899999999999999999999999999999998765431 11122221 23577899999986 5555555544
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
+. ++|+||||+|.... . . .+.+++|+.++.++++++. +.+.+++|++||..... + ...|
T Consensus 134 ~~-~~D~Vi~~aa~~~~--~-----~----~~~~~vn~~~~~~ll~aa~----~~gv~r~V~iSS~~v~~--p---~~~~ 192 (390)
T PLN02657 134 GD-PVDVVVSCLASRTG--G-----V----KDSWKIDYQATKNSLDAGR----EVGAKHFVLLSAICVQK--P---LLEF 192 (390)
T ss_pred CC-CCcEEEECCccCCC--C-----C----ccchhhHHHHHHHHHHHHH----HcCCCEEEEEeeccccC--c---chHH
Confidence 31 46799999985321 1 0 1234678888887777753 44567999999986543 2 3468
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc-------cc-----cC----CCCCCCHHHHHHHHHHHhC
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS-------IK-----RS----SFFVPSTDVYARAAMRWIG 270 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~-------~~-----~~----~~~~~~~~~~a~~i~~~l~ 270 (320)
..+|...+...+. ...|++...+.|+.+-.++.. .. .+ .....+.+++|+.++..+.
T Consensus 193 ~~sK~~~E~~l~~-----~~~gl~~tIlRp~~~~~~~~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~ 265 (390)
T PLN02657 193 QRAKLKFEAELQA-----LDSDFTYSIVRPTAFFKSLGGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVL 265 (390)
T ss_pred HHHHHHHHHHHHh-----ccCCCCEEEEccHHHhcccHHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHh
Confidence 8899888776543 246899999999765433211 00 00 1123677899999888874
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.1e-12 Score=121.38 Aligned_cols=199 Identities=14% Similarity=0.097 Sum_probs=131.3
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKT-GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~-G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
.+.++|+||||+|.||..++++|+++ |++|++++|+.++.+...+.-... ...++.++.+|+.|. +.++++ +.
T Consensus 12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~-~~~~~~~~~~Dl~d~--~~l~~~---~~ 85 (386)
T PLN02427 12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVP-WSGRIQFHRINIKHD--SRLEGL---IK 85 (386)
T ss_pred ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhcccccc-CCCCeEEEEcCCCCh--HHHHHH---hh
Confidence 34578999999999999999999998 589999998866543322110000 013588889999876 333333 33
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC-------CC
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP-------SD 202 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~-------~~ 202 (320)
+ +|+|||.|+...+ .... .++ .+.+..|+.+..++++++.. .+ .++|++||...+... ..
T Consensus 86 ~--~d~ViHlAa~~~~--~~~~-~~~---~~~~~~n~~gt~~ll~aa~~----~~-~r~v~~SS~~vYg~~~~~~~~e~~ 152 (386)
T PLN02427 86 M--ADLTINLAAICTP--ADYN-TRP---LDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVYGKTIGSFLPKDH 152 (386)
T ss_pred c--CCEEEEcccccCh--hhhh-hCh---HHHHHHHHHHHHHHHHHHHh----cC-CEEEEEeeeeeeCCCcCCCCCccc
Confidence 3 5699999997543 1111 111 23456899999998887643 23 689999997543210 00
Q ss_pred ------------------------CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc-----------
Q 020854 203 ------------------------PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS----------- 247 (320)
Q Consensus 203 ------------------------~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~----------- 247 (320)
.....|+.||.+.+.++...+.. .|+++..+.|+.|-.|-..
T Consensus 153 p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~ 229 (386)
T PLN02427 153 PLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEG 229 (386)
T ss_pred ccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEecccceeCCCCCccccccccccc
Confidence 01236999999999988766543 5899999999887665310
Q ss_pred --------------cc--------cCCCCCCCHHHHHHHHHHHhCC
Q 020854 248 --------------IK--------RSSFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 248 --------------~~--------~~~~~~~~~~~~a~~i~~~l~~ 271 (320)
.. .........+++|+.++..+..
T Consensus 230 ~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~ 275 (386)
T PLN02427 230 VPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIEN 275 (386)
T ss_pred cchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhC
Confidence 00 0011256789999999988864
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.3e-12 Score=111.23 Aligned_cols=165 Identities=22% Similarity=0.290 Sum_probs=123.5
Q ss_pred EEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeEE
Q 020854 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGV 135 (320)
Q Consensus 56 vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 135 (320)
|+||||+|-||.+++++|.++|+.|+.+.|+.......... ..+..+.+|+.|. +.++++.+.. ++|.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~-------~~~~~~~~dl~~~--~~~~~~~~~~---~~d~ 68 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK-------LNVEFVIGDLTDK--EQLEKLLEKA---NIDV 68 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH-------TTEEEEESETTSH--HHHHHHHHHH---TESE
T ss_pred EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc-------ceEEEEEeecccc--cccccccccc---CceE
Confidence 79999999999999999999999988888876543322111 1688899999975 5555555554 5779
Q ss_pred EEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC-CC--------CCch
Q 020854 136 LINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP-SD--------PLYS 206 (320)
Q Consensus 136 lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~-~~--------~~~~ 206 (320)
|||.||.... ..+.+.....++.|+.+..++++.+.. .+..++|++||...+..+ +. ....
T Consensus 69 vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~ 138 (236)
T PF01370_consen 69 VIHLAAFSSN------PESFEDPEEIIEANVQGTRNLLEAARE----AGVKRFIFLSSASVYGDPDGEPIDEDSPINPLS 138 (236)
T ss_dssp EEEEBSSSSH------HHHHHSHHHHHHHHHHHHHHHHHHHHH----HTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSS
T ss_pred EEEeeccccc------ccccccccccccccccccccccccccc----ccccccccccccccccccccccccccccccccc
Confidence 9999997531 112234567788999999988888754 334799999996554421 01 1245
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCC
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKM 245 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~ 245 (320)
.|+.+|...+.+.+.+..+. ++++..+.|+.+-.+.
T Consensus 139 ~Y~~~K~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~ 174 (236)
T PF01370_consen 139 PYGASKRAAEELLRDYAKKY---GLRVTILRPPNVYGPG 174 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---TSEEEEEEESEEESTT
T ss_pred cccccccccccccccccccc---cccccccccccccccc
Confidence 69999999999999988774 8999999999998887
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.3e-12 Score=112.33 Aligned_cols=167 Identities=21% Similarity=0.139 Sum_probs=120.6
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCC--eEEEEeC-----CHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHH
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGR-----NPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKE 126 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~--~Vil~~r-----~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 126 (320)
+.+|||||.|.||.++++.+.++.. +|+.++. |.+.+... . .+.+..+++.|+.|. +.+.++.+
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~----~---~~~~~~fv~~DI~D~--~~v~~~~~ 71 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADV----E---DSPRYRFVQGDICDR--ELVDRLFK 71 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhh----h---cCCCceEEeccccCH--HHHHHHHH
Confidence 4689999999999999999998764 4677765 33333222 1 256899999999986 66666655
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccccc-------
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI------- 199 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~------- 199 (320)
++ ++|++||-|+=+.- |.+.+.-+..+++|+.|++.+.+++..+..+ -+++.||.-.-+..
T Consensus 72 ~~---~~D~VvhfAAESHV------DRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~---frf~HISTDEVYG~l~~~~~~ 139 (340)
T COG1088 72 EY---QPDAVVHFAAESHV------DRSIDGPAPFIQTNVVGTYTLLEAARKYWGK---FRFHHISTDEVYGDLGLDDDA 139 (340)
T ss_pred hc---CCCeEEEechhccc------cccccChhhhhhcchHHHHHHHHHHHHhccc---ceEEEeccccccccccCCCCC
Confidence 44 57799999985542 3445555677899999999999998775532 47888887433221
Q ss_pred ----CCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecC
Q 020854 200 ----PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATK 244 (320)
Q Consensus 200 ----~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~ 244 (320)
.+....++|++||||-+.++++..+.+ |+.+....+.---.|
T Consensus 140 FtE~tp~~PsSPYSASKAasD~lVray~~TY---glp~~ItrcSNNYGP 185 (340)
T COG1088 140 FTETTPYNPSSPYSASKAASDLLVRAYVRTY---GLPATITRCSNNYGP 185 (340)
T ss_pred cccCCCCCCCCCcchhhhhHHHHHHHHHHHc---CCceEEecCCCCcCC
Confidence 123346889999999999999999875 777777766543333
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.42 E-value=7.1e-12 Score=125.48 Aligned_cols=194 Identities=15% Similarity=0.136 Sum_probs=133.1
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKT-GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~-G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
+++++|+||||+|.||..++++|+++ |++|+.++|+....... . +...+.++.+|++|.. ..++ +.+.
T Consensus 313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~----~---~~~~~~~~~gDl~d~~-~~l~---~~l~ 381 (660)
T PRK08125 313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF----L---GHPRFHFVEGDISIHS-EWIE---YHIK 381 (660)
T ss_pred hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhh----c---CCCceEEEeccccCcH-HHHH---HHhc
Confidence 67899999999999999999999986 79999999976543221 1 1235778889998751 1122 2233
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC---C-----
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---S----- 201 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~---~----- 201 (320)
++|+|||.||...+. .. ..+ .+..+++|+.++.++.+++.. .+ .++|++||...+..+ +
T Consensus 382 --~~D~ViHlAa~~~~~--~~-~~~---~~~~~~~Nv~~t~~ll~a~~~----~~-~~~V~~SS~~vyg~~~~~~~~E~~ 448 (660)
T PRK08125 382 --KCDVVLPLVAIATPI--EY-TRN---PLRVFELDFEENLKIIRYCVK----YN-KRIIFPSTSEVYGMCTDKYFDEDT 448 (660)
T ss_pred --CCCEEEECccccCch--hh-ccC---HHHHHHhhHHHHHHHHHHHHh----cC-CeEEEEcchhhcCCCCCCCcCccc
Confidence 366999999976531 11 112 245678999999999998764 23 589999997543210 0
Q ss_pred -----CC---CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc----------------------ccc-
Q 020854 202 -----DP---LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS----------------------IKR- 250 (320)
Q Consensus 202 -----~~---~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~----------------------~~~- 250 (320)
.| ....|+.||.+.+.+++.++.+ .|+++..+.|+.+..|-.. ...
T Consensus 449 ~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i 525 (660)
T PRK08125 449 SNLIVGPINKQRWIYSVSKQLLDRVIWAYGEK---EGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPI 525 (660)
T ss_pred cccccCCCCCCccchHHHHHHHHHHHHHHHHh---cCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCe
Confidence 01 1246999999999999887665 4789999999887654210 000
Q ss_pred ----C---CCCCCCHHHHHHHHHHHhCC
Q 020854 251 ----S---SFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 251 ----~---~~~~~~~~~~a~~i~~~l~~ 271 (320)
+ .......+++++.++..+..
T Consensus 526 ~~~g~g~~~rd~i~v~Dva~a~~~~l~~ 553 (660)
T PRK08125 526 KLVDGGKQKRCFTDIRDGIEALFRIIEN 553 (660)
T ss_pred EEeCCCceeeceeeHHHHHHHHHHHHhc
Confidence 0 11245789999998888764
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.42 E-value=5.7e-12 Score=120.05 Aligned_cols=193 Identities=14% Similarity=0.106 Sum_probs=127.0
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.+++.|+||||+|.||..++++|.++|++|++++|......+. +.......++..+..|+.+. . +.
T Consensus 117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~---~~~~~~~~~~~~i~~D~~~~--~--------l~- 182 (442)
T PLN02206 117 RKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKEN---VMHHFSNPNFELIRHDVVEP--I--------LL- 182 (442)
T ss_pred cCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhh---hhhhccCCceEEEECCccCh--h--------hc-
Confidence 4679999999999999999999999999999998754322111 11111234567777787654 1 11
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC----------
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------- 200 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~---------- 200 (320)
++|+|||.|+...+ .. .+.+ ....+++|+.|+.++.+++.. .+ .++|++||...+..+
T Consensus 183 -~~D~ViHlAa~~~~--~~-~~~~---p~~~~~~Nv~gt~nLleaa~~----~g-~r~V~~SS~~VYg~~~~~p~~E~~~ 250 (442)
T PLN02206 183 -EVDQIYHLACPASP--VH-YKFN---PVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQVETYW 250 (442)
T ss_pred -CCCEEEEeeeecch--hh-hhcC---HHHHHHHHHHHHHHHHHHHHH----hC-CEEEEECChHHhCCCCCCCCCcccc
Confidence 36799999987543 11 1112 356789999999999998754 23 489999998654310
Q ss_pred ----CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCC--------c--------ccc-----C---C
Q 020854 201 ----SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMA--------S--------IKR-----S---S 252 (320)
Q Consensus 201 ----~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~--------~--------~~~-----~---~ 252 (320)
+......|+.||.+.+.+++.+..+ .|+++..+.|+.+-.|-. . ... + .
T Consensus 251 ~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~---~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~ 327 (442)
T PLN02206 251 GNVNPIGVRSCYDEGKRTAETLTMDYHRG---ANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT 327 (442)
T ss_pred ccCCCCCccchHHHHHHHHHHHHHHHHHH---hCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEE
Confidence 1112467999999999988876554 367888777765543320 0 000 0 0
Q ss_pred CCCCCHHHHHHHHHHHhCCC
Q 020854 253 FFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 253 ~~~~~~~~~a~~i~~~l~~~ 272 (320)
......+++|+.++..+..+
T Consensus 328 rdfi~V~Dva~ai~~a~e~~ 347 (442)
T PLN02206 328 RSFQFVSDLVEGLMRLMEGE 347 (442)
T ss_pred EeEEeHHHHHHHHHHHHhcC
Confidence 11456888998888876543
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.42 E-value=5.6e-12 Score=113.13 Aligned_cols=166 Identities=22% Similarity=0.251 Sum_probs=117.4
Q ss_pred EEECCCCcHHHHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeE
Q 020854 57 LVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG 134 (320)
Q Consensus 57 lITGas~GIG~ala~~l~~~G--~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 134 (320)
|||||+|-||..++++|.++| ++|.+.+++...... ..+.. .....++.+|++|. +.+.+.+.+ .|
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~~~---~~~~~~~~~Di~d~-----~~l~~a~~g--~d 68 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDLQK---SGVKEYIQGDITDP-----ESLEEALEG--VD 68 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhhhc---ccceeEEEeccccH-----HHHHHHhcC--Cc
Confidence 699999999999999999999 789888887654221 11111 12233899999987 455555555 45
Q ss_pred EEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC--CC----------
Q 020854 135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP--SD---------- 202 (320)
Q Consensus 135 ~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~--~~---------- 202 (320)
+|||.|+...... ....+.++++|+.|+-++++++.. .+-.++|++||.+..... +.
T Consensus 69 ~V~H~Aa~~~~~~-------~~~~~~~~~vNV~GT~nvl~aa~~----~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~ 137 (280)
T PF01073_consen 69 VVFHTAAPVPPWG-------DYPPEEYYKVNVDGTRNVLEAARK----AGVKRLVYTSSISVVFDNYKGDPIINGDEDTP 137 (280)
T ss_pred eEEEeCccccccC-------cccHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEcCcceeEeccCCCCcccCCcCCc
Confidence 9999999754311 223477889999999999998864 456789999999886630 00
Q ss_pred ---CCchhhHHHHHHHHHHHHHHHH-HHcc-CCceEEEEeccceecCC
Q 020854 203 ---PLYSVYAATKAYIDQFSRSLYV-EYRK-SGIDVQCQVPLYVATKM 245 (320)
Q Consensus 203 ---~~~~~Y~asKaal~~~~~~l~~-el~~-~gi~v~~v~PG~v~T~~ 245 (320)
.....|+.||+..+.++..... ++.. ..++..+|.|..|--|-
T Consensus 138 ~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~ 185 (280)
T PF01073_consen 138 YPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPG 185 (280)
T ss_pred ccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcc
Confidence 1234799999999988876554 2211 24788889998886653
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.1e-11 Score=114.72 Aligned_cols=191 Identities=15% Similarity=0.147 Sum_probs=128.1
Q ss_pred CEEEEECCCCcHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKT-GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~-G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
++++||||+|-||..++++|+++ |++|+.++|+.++... +. +...+.++.+|+.++. ..+++ .+. +
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~----~~---~~~~~~~~~~Dl~~~~-~~~~~---~~~--~ 68 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGD----LV---NHPRMHFFEGDITINK-EWIEY---HVK--K 68 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHH----hc---cCCCeEEEeCCCCCCH-HHHHH---HHc--C
Confidence 46999999999999999999986 6999999987654322 11 1335788889997431 22222 233 3
Q ss_pred eEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCC----C------
Q 020854 133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS----D------ 202 (320)
Q Consensus 133 id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~----~------ 202 (320)
+|+|||.|+...+ .. ..++-+..+++|+.++.++++++.. .+ .++|++||...+.... .
T Consensus 69 ~d~ViH~aa~~~~--~~----~~~~p~~~~~~n~~~~~~ll~aa~~----~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~ 137 (347)
T PRK11908 69 CDVILPLVAIATP--AT----YVKQPLRVFELDFEANLPIVRSAVK----YG-KHLVFPSTSEVYGMCPDEEFDPEASPL 137 (347)
T ss_pred CCEEEECcccCCh--HH----hhcCcHHHHHHHHHHHHHHHHHHHh----cC-CeEEEEecceeeccCCCcCcCcccccc
Confidence 5699999997543 11 1112246679999999998888653 33 5899999975432100 0
Q ss_pred ------CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc----------------------cc-----
Q 020854 203 ------PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS----------------------IK----- 249 (320)
Q Consensus 203 ------~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~----------------------~~----- 249 (320)
.....|+.||.+.+.+.+.++.+ .|+++..+.|+.+-.|-.. ..
T Consensus 138 ~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 214 (347)
T PRK11908 138 VYGPINKPRWIYACSKQLMDRVIWAYGME---EGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLV 214 (347)
T ss_pred ccCcCCCccchHHHHHHHHHHHHHHHHHH---cCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEe
Confidence 11236999999999998887654 4788888888766444210 00
Q ss_pred ---cCCCCCCCHHHHHHHHHHHhCC
Q 020854 250 ---RSSFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 250 ---~~~~~~~~~~~~a~~i~~~l~~ 271 (320)
.........+++++.++..+..
T Consensus 215 ~~g~~~r~~i~v~D~a~a~~~~~~~ 239 (347)
T PRK11908 215 DGGSQKRAFTDIDDGIDALMKIIEN 239 (347)
T ss_pred cCCceeeccccHHHHHHHHHHHHhC
Confidence 0111257889999998888764
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.41 E-value=5.9e-12 Score=113.24 Aligned_cols=170 Identities=14% Similarity=0.137 Sum_probs=116.9
Q ss_pred EEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeEE
Q 020854 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGV 135 (320)
Q Consensus 56 vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 135 (320)
++||||||.||.+++++|.++|++|++++|+ .+|+.+. + .+.+.+...++|+
T Consensus 2 ilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-----------------------~~d~~~~--~---~~~~~~~~~~~d~ 53 (287)
T TIGR01214 2 ILITGANGQLGRELVQQLSPEGRVVVALTSS-----------------------QLDLTDP--E---ALERLLRAIRPDA 53 (287)
T ss_pred EEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-----------------------ccCCCCH--H---HHHHHHHhCCCCE
Confidence 7999999999999999999999999999985 2466654 3 3333344445779
Q ss_pred EEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC---------CCCCch
Q 020854 136 LINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------SDPLYS 206 (320)
Q Consensus 136 lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~---------~~~~~~ 206 (320)
+||+||.... . ......+..+++|+.++.++++++.. .+ .++|++||...+..+ +.....
T Consensus 54 vi~~a~~~~~--~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~ 122 (287)
T TIGR01214 54 VVNTAAYTDV--D----GAESDPEKAFAVNALAPQNLARAAAR----HG-ARLVHISTDYVFDGEGKRPYREDDATNPLN 122 (287)
T ss_pred EEECCccccc--c----ccccCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEeeeeeecCCCCCCCCCCCCCCCcc
Confidence 9999996532 1 11122356779999999999998643 22 489999996543210 011246
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc------------ccc-------CCCCCCCHHHHHHHHHH
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS------------IKR-------SSFFVPSTDVYARAAMR 267 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~------------~~~-------~~~~~~~~~~~a~~i~~ 267 (320)
.|+.+|.+.+.+++.+ +.++..+.|+.+-.+... ... ........+++++.+..
T Consensus 123 ~Y~~~K~~~E~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~ 195 (287)
T TIGR01214 123 VYGQSKLAGEQAIRAA-------GPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAA 195 (287)
T ss_pred hhhHHHHHHHHHHHHh-------CCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHH
Confidence 7999999998887764 457888889887654310 000 01123457899999888
Q ss_pred HhCC
Q 020854 268 WIGY 271 (320)
Q Consensus 268 ~l~~ 271 (320)
.+..
T Consensus 196 ~~~~ 199 (287)
T TIGR01214 196 LLQR 199 (287)
T ss_pred HHhh
Confidence 8764
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.41 E-value=8.9e-12 Score=125.14 Aligned_cols=200 Identities=15% Similarity=0.023 Sum_probs=132.7
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHc--CCeEEEEeCCH--HHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKT--GLNLVLVGRNP--DKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA 127 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~--G~~Vil~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 127 (320)
++|+||||||+|.||+.++++|.++ |++|+.++|.. ++..... .......+.++.+|++|. +.++.+.
T Consensus 5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~----~~~~~~~v~~~~~Dl~d~--~~~~~~~-- 76 (668)
T PLN02260 5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLN----PSKSSPNFKFVKGDIASA--DLVNYLL-- 76 (668)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhh----hcccCCCeEEEECCCCCh--HHHHHHH--
Confidence 4789999999999999999999998 67899888752 2222111 111134578889999986 4443332
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCC------
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS------ 201 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~------ 201 (320)
...++|+|||+|+..... ...+.....+++|+.|+.++++++... ....++|++||...+..+.
T Consensus 77 -~~~~~D~ViHlAa~~~~~------~~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~vkr~I~~SS~~vyg~~~~~~~~~ 146 (668)
T PLN02260 77 -ITEGIDTIMHFAAQTHVD------NSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDADVG 146 (668)
T ss_pred -hhcCCCEEEECCCccCch------hhhhCHHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEcchHHhCCCccccccC
Confidence 223577999999975421 111223466789999999998886431 1246899999975432110
Q ss_pred ------CCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc--------------cc-----cC---CC
Q 020854 202 ------DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS--------------IK-----RS---SF 253 (320)
Q Consensus 202 ------~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~--------------~~-----~~---~~ 253 (320)
......|+.||.+.+.+.+.+..+ .++++..+.|+.+-.+-.. .. .+ ..
T Consensus 147 ~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~---~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r 223 (668)
T PLN02260 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVR 223 (668)
T ss_pred ccccCCCCCCCCcHHHHHHHHHHHHHHHHH---cCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceE
Confidence 112357999999999999887665 4788888998877544311 00 00 11
Q ss_pred CCCCHHHHHHHHHHHhCCC
Q 020854 254 FVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 254 ~~~~~~~~a~~i~~~l~~~ 272 (320)
.....+++|+.+...+..+
T Consensus 224 ~~ihV~Dva~a~~~~l~~~ 242 (668)
T PLN02260 224 SYLYCEDVAEAFEVVLHKG 242 (668)
T ss_pred eeEEHHHHHHHHHHHHhcC
Confidence 2467889999988877543
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.40 E-value=5.2e-12 Score=110.53 Aligned_cols=151 Identities=19% Similarity=0.116 Sum_probs=112.2
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCe
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV 133 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 133 (320)
+++|||||.|-||..++.+|++.|++|+++|.-.....+..+.. ...+++.|+.|. +.++++ +.+.+|
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~-------~~~f~~gDi~D~--~~L~~v---f~~~~i 68 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL-------QFKFYEGDLLDR--ALLTAV---FEENKI 68 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc-------cCceEEeccccH--HHHHHH---HHhcCC
Confidence 46999999999999999999999999999997655444333221 167899999987 444444 444468
Q ss_pred EEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCC---------CCC
Q 020854 134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS---------DPL 204 (320)
Q Consensus 134 d~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~---------~~~ 204 (320)
|.|||-||...- ..+.+.-.+.++.|+.|++.|++++ ++.+-.+||+-||.+-+..|. ...
T Consensus 69 daViHFAa~~~V------gESv~~Pl~Yy~NNv~gTl~Ll~am----~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p 138 (329)
T COG1087 69 DAVVHFAASISV------GESVQNPLKYYDNNVVGTLNLIEAM----LQTGVKKFIFSSTAAVYGEPTTSPISETSPLAP 138 (329)
T ss_pred CEEEECcccccc------chhhhCHHHHHhhchHhHHHHHHHH----HHhCCCEEEEecchhhcCCCCCcccCCCCCCCC
Confidence 899999997653 1234445788899999999999985 445566788887766654221 112
Q ss_pred chhhHHHHHHHHHHHHHHHHHH
Q 020854 205 YSVYAATKAYIDQFSRSLYVEY 226 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el 226 (320)
..+|+.||...+.+.+.++.-.
T Consensus 139 ~NPYG~sKlm~E~iL~d~~~a~ 160 (329)
T COG1087 139 INPYGRSKLMSEEILRDAAKAN 160 (329)
T ss_pred CCcchhHHHHHHHHHHHHHHhC
Confidence 4579999999999999888764
|
|
| >KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.40 E-value=4.7e-11 Score=95.09 Aligned_cols=200 Identities=14% Similarity=0.120 Sum_probs=143.6
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCC----CcHHHHHHHHHHHc
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG----DLDEGVERIKEAIE 129 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~----~~~~~~~~~~~~~~ 129 (320)
..|+|-||-+.+|.++++.|-+.++-|.-++-.+.+-. +.. +.+|-.+ +.+...+++-+.++
T Consensus 4 grVivYGGkGALGSacv~~FkannywV~siDl~eNe~A-----------d~s---I~V~~~~swtEQe~~v~~~vg~sL~ 69 (236)
T KOG4022|consen 4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA-----------DSS---ILVDGNKSWTEQEQSVLEQVGSSLQ 69 (236)
T ss_pred ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc-----------cce---EEecCCcchhHHHHHHHHHHHHhhc
Confidence 56899999999999999999999998888776554210 111 2233332 33455677777777
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhH
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA 209 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~ 209 (320)
+.++|.+++-||........-.++ .+.-+.++...+.....-.+.+..+++ .+|-.-..+.-++.. +.|++..|+
T Consensus 70 gekvDav~CVAGGWAGGnAksKdl-~KNaDLMwKQSvwtSaIsa~lAt~HLK--~GGLL~LtGAkaAl~--gTPgMIGYG 144 (236)
T KOG4022|consen 70 GEKVDAVFCVAGGWAGGNAKSKDL-VKNADLMWKQSVWTSAISAKLATTHLK--PGGLLQLTGAKAALG--GTPGMIGYG 144 (236)
T ss_pred ccccceEEEeeccccCCCcchhhh-hhchhhHHHHHHHHHHHHHHHHHhccC--CCceeeecccccccC--CCCcccchh
Confidence 778999999998766422111111 123345666666666666666666663 456777777777776 789999999
Q ss_pred HHHHHHHHHHHHHHHHHc--cCCceEEEEeccceecCCCccccCC---CCCCCHHHHHHHHHHHhCCC
Q 020854 210 ATKAYIDQFSRSLYVEYR--KSGIDVQCQVPLYVATKMASIKRSS---FFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 210 asKaal~~~~~~l~~el~--~~gi~v~~v~PG~v~T~~~~~~~~~---~~~~~~~~~a~~i~~~l~~~ 272 (320)
++|+|+.+++++|+.+-. +.|-.+..|.|=..+|||++.-.|. ..+..-+.+++..++|....
T Consensus 145 MAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~ADfssWTPL~fi~e~flkWtt~~ 212 (236)
T KOG4022|consen 145 MAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNADFSSWTPLSFISEHFLKWTTET 212 (236)
T ss_pred HHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCCcccCcccHHHHHHHHHHHhccC
Confidence 999999999999999854 5678889999999999999863332 23566778888888887544
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.39 E-value=4.2e-11 Score=100.45 Aligned_cols=166 Identities=20% Similarity=0.261 Sum_probs=120.4
Q ss_pred EEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeEE
Q 020854 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGV 135 (320)
Q Consensus 56 vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 135 (320)
|+|+||||.+|+.++++|.++|++|+++.|++++.++ ...+..+++|+.|. +.+.+.+.+ .|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~----------~~~~~~~~~d~~d~-----~~~~~al~~--~d~ 63 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED----------SPGVEIIQGDLFDP-----DSVKAALKG--ADA 63 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH----------CTTEEEEESCTTCH-----HHHHHHHTT--SSE
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc----------ccccccceeeehhh-----hhhhhhhhh--cch
Confidence 6899999999999999999999999999999988765 45688999999876 555555665 449
Q ss_pred EEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCC---------ch
Q 020854 136 LINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL---------YS 206 (320)
Q Consensus 136 lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~---------~~ 206 (320)
+|+++|.... + ...++.++..+++.+..++|.+||...... .+. ..
T Consensus 64 vi~~~~~~~~----------~-------------~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~--~~~~~~~~~~~~~~ 118 (183)
T PF13460_consen 64 VIHAAGPPPK----------D-------------VDAAKNIIEAAKKAGVKRVVYLSSAGVYRD--PPGLFSDEDKPIFP 118 (183)
T ss_dssp EEECCHSTTT----------H-------------HHHHHHHHHHHHHTTSSEEEEEEETTGTTT--CTSEEEGGTCGGGH
T ss_pred hhhhhhhhcc----------c-------------ccccccccccccccccccceeeeccccCCC--CCcccccccccchh
Confidence 9999975321 0 334456666666677789999999887662 222 23
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc-------ccCCCCCCCHHHHHHHHHHHhC
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI-------KRSSFFVPSTDVYARAAMRWIG 270 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~-------~~~~~~~~~~~~~a~~i~~~l~ 270 (320)
.|...|...+.+. ...+++...+.||++-.+.... ........+.+++|+.++..+.
T Consensus 119 ~~~~~~~~~e~~~-------~~~~~~~~ivrp~~~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~ 182 (183)
T PF13460_consen 119 EYARDKREAEEAL-------RESGLNWTIVRPGWIYGNPSRSYRLIKEGGPQGVNFISREDVAKAIVEALE 182 (183)
T ss_dssp HHHHHHHHHHHHH-------HHSTSEEEEEEESEEEBTTSSSEEEESSTSTTSHCEEEHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHH-------HhcCCCEEEEECcEeEeCCCcceeEEeccCCCCcCcCCHHHHHHHHHHHhC
Confidence 5666666554443 2358999999999987776431 1112245688888888887653
|
... |
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.2e-11 Score=112.25 Aligned_cols=189 Identities=20% Similarity=0.175 Sum_probs=130.1
Q ss_pred EEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeEE
Q 020854 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGV 135 (320)
Q Consensus 56 vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 135 (320)
||||||+|.||..++++|.++|++|+.++|...+..... ..+..+.+|+++. +......+... |.
T Consensus 3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~d~~~~--~~~~~~~~~~~----d~ 67 (314)
T COG0451 3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL---------SGVEFVVLDLTDR--DLVDELAKGVP----DA 67 (314)
T ss_pred EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc---------cccceeeecccch--HHHHHHHhcCC----CE
Confidence 999999999999999999999999999999876543211 2466777887765 33333333222 69
Q ss_pred EEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC------------CCC
Q 020854 136 LINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP------------SDP 203 (320)
Q Consensus 136 lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~------------~~~ 203 (320)
+||.|+...... .... .....+.+|+.++.++++++.. .+..++|+.||.+....+ ..|
T Consensus 68 vih~aa~~~~~~----~~~~-~~~~~~~~nv~gt~~ll~aa~~----~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p 138 (314)
T COG0451 68 VIHLAAQSSVPD----SNAS-DPAEFLDVNVDGTLNLLEAARA----AGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRP 138 (314)
T ss_pred EEEccccCchhh----hhhh-CHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeCCCceECCCCCCCCcccccCCCCC
Confidence 999999865311 1111 3456789999999999999765 456789997775544311 111
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc----------------ccC--CC--------CCCC
Q 020854 204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI----------------KRS--SF--------FVPS 257 (320)
Q Consensus 204 ~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~----------------~~~--~~--------~~~~ 257 (320)
.. .|+.||.+.+.+++.... ..|+.+..+.|+.+--|.... ..+ .. ....
T Consensus 139 ~~-~Yg~sK~~~E~~~~~~~~---~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 214 (314)
T COG0451 139 LN-PYGVSKLAAEQLLRAYAR---LYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVY 214 (314)
T ss_pred CC-HHHHHHHHHHHHHHHHHH---HhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEe
Confidence 12 599999999999998887 467899999988664433110 010 00 1234
Q ss_pred HHHHHHHHHHHhCCC
Q 020854 258 TDVYARAAMRWIGYE 272 (320)
Q Consensus 258 ~~~~a~~i~~~l~~~ 272 (320)
.+++++.++..++.+
T Consensus 215 v~D~a~~~~~~~~~~ 229 (314)
T COG0451 215 VDDVADALLLALENP 229 (314)
T ss_pred HHHHHHHHHHHHhCC
Confidence 778888888888865
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.2e-11 Score=112.60 Aligned_cols=159 Identities=19% Similarity=0.191 Sum_probs=102.7
Q ss_pred EEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHH-HcC---C
Q 020854 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA-IEG---L 131 (320)
Q Consensus 56 vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~---~ 131 (320)
++||||+|.||+.++++|+++|++++++.|+....... .. ...+|+.|. ...+.+.+. +.. .
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-~~-----------~~~~~~~d~--~~~~~~~~~~~~~~~~~ 67 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-VN-----------LVDLDIADY--MDKEDFLAQIMAGDDFG 67 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-Hh-----------hhhhhhhhh--hhHHHHHHHHhcccccC
Confidence 79999999999999999999999766665554321111 00 122444442 111222222 211 2
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCC---------C
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS---------D 202 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~---------~ 202 (320)
++|+|||.||.... . +.+. +..+++|+.++.++++++.. .+ .++|++||.+.+..+. .
T Consensus 68 ~~d~Vih~A~~~~~--~---~~~~---~~~~~~n~~~t~~ll~~~~~----~~-~~~i~~SS~~vyg~~~~~~~~E~~~~ 134 (308)
T PRK11150 68 DIEAIFHEGACSST--T---EWDG---KYMMDNNYQYSKELLHYCLE----RE-IPFLYASSAATYGGRTDDFIEEREYE 134 (308)
T ss_pred CccEEEECceecCC--c---CCCh---HHHHHHHHHHHHHHHHHHHH----cC-CcEEEEcchHHhCcCCCCCCccCCCC
Confidence 57799999986432 1 1122 34689999999999998753 33 4799999986543110 1
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecC
Q 020854 203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATK 244 (320)
Q Consensus 203 ~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~ 244 (320)
.....|+.||.+.+.+.+.+..+ .++++..+.|+.+-.+
T Consensus 135 ~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyG~ 173 (308)
T PRK11150 135 KPLNVYGYSKFLFDEYVRQILPE---ANSQICGFRYFNVYGP 173 (308)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHH---cCCCEEEEeeeeecCC
Confidence 12457999999999988877654 4788888888766543
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.37 E-value=2e-11 Score=116.13 Aligned_cols=193 Identities=12% Similarity=0.069 Sum_probs=126.0
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
+.++++++||||+|.||..++++|.++|++|++++|...........+. ....+..+..|+.+.. +.
T Consensus 117 ~~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~---~~~~~~~~~~Di~~~~----------~~ 183 (436)
T PLN02166 117 GRKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLF---GNPRFELIRHDVVEPI----------LL 183 (436)
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhc---cCCceEEEECcccccc----------cc
Confidence 3456889999999999999999999999999999986432111111111 1234666777776531 11
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC---------
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP--------- 200 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~--------- 200 (320)
++|+|||.|+..... .. +.+ -...+++|+.|+.++++++... + .++|++||.+.+..+
T Consensus 184 --~~D~ViHlAa~~~~~--~~-~~~---p~~~~~~Nv~gT~nLleaa~~~----g-~r~V~~SS~~VYg~~~~~p~~E~~ 250 (436)
T PLN02166 184 --EVDQIYHLACPASPV--HY-KYN---PVKTIKTNVMGTLNMLGLAKRV----G-ARFLLTSTSEVYGDPLEHPQKETY 250 (436)
T ss_pred --CCCEEEECceeccch--hh-ccC---HHHHHHHHHHHHHHHHHHHHHh----C-CEEEEECcHHHhCCCCCCCCCccc
Confidence 467999999865431 11 112 2567899999999999887542 2 489999997644311
Q ss_pred -----CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCC--------c--------cc-----c---C
Q 020854 201 -----SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMA--------S--------IK-----R---S 251 (320)
Q Consensus 201 -----~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~--------~--------~~-----~---~ 251 (320)
+......|+.||.+.+.+++..... .|+++..+.|+.+-.+-. . .. . .
T Consensus 251 ~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~---~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~ 327 (436)
T PLN02166 251 WGNVNPIGERSCYDEGKRTAETLAMDYHRG---AGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQ 327 (436)
T ss_pred cccCCCCCCCCchHHHHHHHHHHHHHHHHH---hCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCe
Confidence 1112356999999999998877654 467888777765544321 0 00 0 0
Q ss_pred CCCCCCHHHHHHHHHHHhCC
Q 020854 252 SFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 252 ~~~~~~~~~~a~~i~~~l~~ 271 (320)
.......+++++.+...+..
T Consensus 328 ~rdfi~V~Dva~ai~~~~~~ 347 (436)
T PLN02166 328 TRSFQYVSDLVDGLVALMEG 347 (436)
T ss_pred EEeeEEHHHHHHHHHHHHhc
Confidence 11245678888888877654
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.37 E-value=2e-11 Score=111.07 Aligned_cols=162 Identities=14% Similarity=0.128 Sum_probs=105.1
Q ss_pred EEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHH-HcCCCe
Q 020854 56 ALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA-IEGLDV 133 (320)
Q Consensus 56 vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~~i 133 (320)
|+||||+|.||..+++.|.++|+ .|++++|..... .. .++ . ...+..|+.+. +..+.+.+. +. ++
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~-~~~-----~--~~~~~~d~~~~--~~~~~~~~~~~~--~~ 67 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KF-LNL-----A--DLVIADYIDKE--DFLDRLEKGAFG--KI 67 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hh-hhh-----h--heeeeccCcch--hHHHHHHhhccC--CC
Confidence 68999999999999999999998 688887754321 11 111 1 12344555543 444544442 22 57
Q ss_pred EEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC---------CCCC
Q 020854 134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------SDPL 204 (320)
Q Consensus 134 d~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~---------~~~~ 204 (320)
|+|||+||.... +.++.+..+++|+.++.++++.+.. .+ .++|++||...+..+ ....
T Consensus 68 D~vvh~A~~~~~--------~~~~~~~~~~~n~~~~~~ll~~~~~----~~-~~~v~~SS~~vy~~~~~~~~e~~~~~~p 134 (314)
T TIGR02197 68 EAIFHQGACSDT--------TETDGEYMMENNYQYSKRLLDWCAE----KG-IPFIYASSAATYGDGEAGFREGRELERP 134 (314)
T ss_pred CEEEECccccCc--------cccchHHHHHHHHHHHHHHHHHHHH----hC-CcEEEEccHHhcCCCCCCcccccCcCCC
Confidence 799999996431 1223466789999999999998754 22 479999997644310 0113
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecC
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATK 244 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~ 244 (320)
...|+.||.+.+.+++....+. ..++++..+.|+.+-.+
T Consensus 135 ~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~~lR~~~vyG~ 173 (314)
T TIGR02197 135 LNVYGYSKFLFDQYVRRRVLPE-ALSAQVVGLRYFNVYGP 173 (314)
T ss_pred CCHHHHHHHHHHHHHHHHhHhh-ccCCceEEEEEeeccCC
Confidence 5679999999999987633221 22467777777655443
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=8.7e-11 Score=107.44 Aligned_cols=176 Identities=20% Similarity=0.142 Sum_probs=118.0
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeE
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG 134 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 134 (320)
+++||||||.||+.++++|.++|++|++++|+.++.... . ...+..+.+|+.|. +.+.+.+.+ +|
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l----~----~~~v~~v~~Dl~d~-----~~l~~al~g--~d 66 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFL----K----EWGAELVYGDLSLP-----ETLPPSFKG--VT 66 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhH----h----hcCCEEEECCCCCH-----HHHHHHHCC--CC
Confidence 699999999999999999999999999999997654321 1 12467888999876 334444554 45
Q ss_pred EEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHHHHHH
Q 020854 135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAY 214 (320)
Q Consensus 135 ~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaa 214 (320)
+|||.++.... + .....++|..++.++.+++. +.+-.++|++||..+.. .+...|..+|..
T Consensus 67 ~Vi~~~~~~~~--------~---~~~~~~~~~~~~~~l~~aa~----~~gvkr~I~~Ss~~~~~----~~~~~~~~~K~~ 127 (317)
T CHL00194 67 AIIDASTSRPS--------D---LYNAKQIDWDGKLALIEAAK----AAKIKRFIFFSILNAEQ----YPYIPLMKLKSD 127 (317)
T ss_pred EEEECCCCCCC--------C---ccchhhhhHHHHHHHHHHHH----HcCCCEEEEeccccccc----cCCChHHHHHHH
Confidence 99998764211 1 12345678888888887764 34456899999965432 123458888988
Q ss_pred HHHHHHHHHHHHccCCceEEEEeccceecCCCc--------cc-------cCCCCCCCHHHHHHHHHHHhCC
Q 020854 215 IDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS--------IK-------RSSFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 215 l~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~--------~~-------~~~~~~~~~~~~a~~i~~~l~~ 271 (320)
.+.+.+ ..|++...+.|+.+-.++.. .. .........+++|+.+...+..
T Consensus 128 ~e~~l~-------~~~l~~tilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~ 192 (317)
T CHL00194 128 IEQKLK-------KSGIPYTIFRLAGFFQGLISQYAIPILEKQPIWITNESTPISYIDTQDAAKFCLKSLSL 192 (317)
T ss_pred HHHHHH-------HcCCCeEEEeecHHhhhhhhhhhhhhccCCceEecCCCCccCccCHHHHHHHHHHHhcC
Confidence 766543 35788888998744322111 00 0011235678999999888864
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.5e-11 Score=111.54 Aligned_cols=149 Identities=17% Similarity=0.225 Sum_probs=103.4
Q ss_pred EEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeEEE
Q 020854 57 LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGVL 136 (320)
Q Consensus 57 lITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 136 (320)
+||||||.||..+++.|.+.|++|+++.+. ..+|++|. +.++++ +...++|+|
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~----------------------~~~Dl~~~--~~l~~~---~~~~~~d~V 53 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH----------------------KELDLTRQ--ADVEAF---FAKEKPTYV 53 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc----------------------ccCCCCCH--HHHHHH---HhccCCCEE
Confidence 699999999999999999999988766432 13677765 333333 333456799
Q ss_pred EEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccccc--------------CCC
Q 020854 137 INNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI--------------PSD 202 (320)
Q Consensus 137 I~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~--------------~~~ 202 (320)
||+|+.... ... ..+.-...+++|+.++..+++.+.. .+.+++|++||..-+.. +..
T Consensus 54 ih~A~~~~~---~~~--~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~ 124 (306)
T PLN02725 54 ILAAAKVGG---IHA--NMTYPADFIRENLQIQTNVIDAAYR----HGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPE 124 (306)
T ss_pred EEeeeeecc---cch--hhhCcHHHHHHHhHHHHHHHHHHHH----cCCCeEEEeCceeecCCCCCCCCCHHHhccCCCC
Confidence 999987431 000 1111245678999999999988753 34568999999654321 111
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecC
Q 020854 203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATK 244 (320)
Q Consensus 203 ~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~ 244 (320)
|....|+.||.+.+.+.+.+..+. ++++..+.|+.+-.+
T Consensus 125 p~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~ 163 (306)
T PLN02725 125 PTNEWYAIAKIAGIKMCQAYRIQY---GWDAISGMPTNLYGP 163 (306)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCC
Confidence 222359999999998888876553 789999999877555
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.35 E-value=4.8e-11 Score=111.48 Aligned_cols=170 Identities=11% Similarity=-0.008 Sum_probs=115.4
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA 127 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 127 (320)
.+--++++++||||+|.||.+++++|.++|++|+.++|...... ... .....+...|+.|. +. +.+.
T Consensus 16 ~~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~------~~~--~~~~~~~~~Dl~d~--~~---~~~~ 82 (370)
T PLN02695 16 YWPSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM------SED--MFCHEFHLVDLRVM--EN---CLKV 82 (370)
T ss_pred CCCCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc------ccc--cccceEEECCCCCH--HH---HHHH
Confidence 44446799999999999999999999999999999998643211 000 11245667788765 22 2222
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC-------
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP------- 200 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~------- 200 (320)
+. ++|+|||.|+.... ....... ....+..|+.++.++++++.. .+..++|++||...+...
T Consensus 83 ~~--~~D~Vih~Aa~~~~--~~~~~~~---~~~~~~~N~~~t~nll~aa~~----~~vk~~V~~SS~~vYg~~~~~~~~~ 151 (370)
T PLN02695 83 TK--GVDHVFNLAADMGG--MGFIQSN---HSVIMYNNTMISFNMLEAARI----NGVKRFFYASSACIYPEFKQLETNV 151 (370)
T ss_pred Hh--CCCEEEEcccccCC--ccccccC---chhhHHHHHHHHHHHHHHHHH----hCCCEEEEeCchhhcCCccccCcCC
Confidence 33 35699999986532 1111111 234567899999999988643 345689999997532200
Q ss_pred --------CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecC
Q 020854 201 --------SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATK 244 (320)
Q Consensus 201 --------~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~ 244 (320)
+......|+.+|.+.+.+++..+.. .|+++..+.|+.+-.|
T Consensus 152 ~~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp 200 (370)
T PLN02695 152 SLKESDAWPAEPQDAYGLEKLATEELCKHYTKD---FGIECRIGRFHNIYGP 200 (370)
T ss_pred CcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEECCccCC
Confidence 1123468999999999999887654 4789999999877665
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.28 E-value=6.2e-11 Score=104.81 Aligned_cols=159 Identities=18% Similarity=0.238 Sum_probs=115.7
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKY-AKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
+++||||||.|-||..++.+|.++|+.|+++|.=.....+.....++.. ....+.+...|+.|. ..++++.+..+
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~--~~L~kvF~~~~-- 77 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDA--EALEKLFSEVK-- 77 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCH--HHHHHHHhhcC--
Confidence 6899999999999999999999999999999853222222222222211 146799999999987 56666655544
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC----------C
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP----------S 201 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~----------~ 201 (320)
+|.|+|-|+.... + .+.+.-.+..+.|+.|++++.... ++.+-..+|+.||..-+..| .
T Consensus 78 -fd~V~Hfa~~~~v--g----eS~~~p~~Y~~nNi~gtlnlLe~~----~~~~~~~~V~sssatvYG~p~~ip~te~~~t 146 (343)
T KOG1371|consen 78 -FDAVMHFAALAAV--G----ESMENPLSYYHNNIAGTLNLLEVM----KAHNVKALVFSSSATVYGLPTKVPITEEDPT 146 (343)
T ss_pred -CceEEeehhhhcc--c----hhhhCchhheehhhhhHHHHHHHH----HHcCCceEEEecceeeecCcceeeccCcCCC
Confidence 7799999987653 1 123333678899999999998884 55556789999997665421 1
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHH
Q 020854 202 DPLYSVYAATKAYIDQFSRSLYVEY 226 (320)
Q Consensus 202 ~~~~~~Y~asKaal~~~~~~l~~el 226 (320)
......|+.+|.+++...+....-+
T Consensus 147 ~~p~~pyg~tK~~iE~i~~d~~~~~ 171 (343)
T KOG1371|consen 147 DQPTNPYGKTKKAIEEIIHDYNKAY 171 (343)
T ss_pred CCCCCcchhhhHHHHHHHHhhhccc
Confidence 1146789999999999999888764
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=6.2e-11 Score=107.54 Aligned_cols=133 Identities=18% Similarity=0.168 Sum_probs=92.0
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeE
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG 134 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 134 (320)
++|||||+|-||.+++++|.++| +|+.++|... .+..|++|. +.++++ +...++|
T Consensus 2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-------------------~~~~Dl~d~--~~~~~~---~~~~~~D 56 (299)
T PRK09987 2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST-------------------DYCGDFSNP--EGVAET---VRKIRPD 56 (299)
T ss_pred eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-------------------cccCCCCCH--HHHHHH---HHhcCCC
Confidence 59999999999999999999999 7888887531 124577765 333333 3333567
Q ss_pred EEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC---------CCCCc
Q 020854 135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------SDPLY 205 (320)
Q Consensus 135 ~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~---------~~~~~ 205 (320)
+|||+|+..... ...++-+..+++|+.++.++++++.. . +.++|++||..-+... +....
T Consensus 57 ~Vih~Aa~~~~~------~~~~~~~~~~~~N~~~~~~l~~aa~~----~-g~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~ 125 (299)
T PRK09987 57 VIVNAAAHTAVD------KAESEPEFAQLLNATSVEAIAKAANE----V-GAWVVHYSTDYVFPGTGDIPWQETDATAPL 125 (299)
T ss_pred EEEECCccCCcc------hhhcCHHHHHHHHHHHHHHHHHHHHH----c-CCeEEEEccceEECCCCCCCcCCCCCCCCC
Confidence 999999976431 11112245568999999999998754 2 2479999996543210 11123
Q ss_pred hhhHHHHHHHHHHHHHHH
Q 020854 206 SVYAATKAYIDQFSRSLY 223 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~ 223 (320)
..|+.||.+.+.+++...
T Consensus 126 ~~Yg~sK~~~E~~~~~~~ 143 (299)
T PRK09987 126 NVYGETKLAGEKALQEHC 143 (299)
T ss_pred CHHHHHHHHHHHHHHHhC
Confidence 579999999999886643
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.8e-10 Score=115.56 Aligned_cols=166 Identities=18% Similarity=0.170 Sum_probs=112.1
Q ss_pred EEEEECCCCcHHHHHHHHHH--HcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 55 WALVTGPTDGIGKSFAFQLA--KTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~--~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
+++||||||.||..++++|+ +.|++|++++|+... ... +.+.......++..+..|++|..........+.+. +
T Consensus 2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~-~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l~--~ 77 (657)
T PRK07201 2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRL-EALAAYWGADRVVPLVGDLTEPGLGLSEADIAELG--D 77 (657)
T ss_pred eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHH-HHHHHhcCCCcEEEEecccCCccCCcCHHHHHHhc--C
Confidence 69999999999999999999 589999999997532 111 11212111246888899998742111112222233 5
Q ss_pred eEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCC-----------
Q 020854 133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS----------- 201 (320)
Q Consensus 133 id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~----------- 201 (320)
+|+|||+||.... ..+ .....++|+.|+.++++.+.. .+..++|++||........
T Consensus 78 ~D~Vih~Aa~~~~------~~~---~~~~~~~nv~gt~~ll~~a~~----~~~~~~v~~SS~~v~g~~~~~~~e~~~~~~ 144 (657)
T PRK07201 78 IDHVVHLAAIYDL------TAD---EEAQRAANVDGTRNVVELAER----LQAATFHHVSSIAVAGDYEGVFREDDFDEG 144 (657)
T ss_pred CCEEEECceeecC------CCC---HHHHHHHHhHHHHHHHHHHHh----cCCCeEEEEeccccccCccCccccccchhh
Confidence 6799999996532 112 244668899999888887643 3457899999976642100
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceec
Q 020854 202 DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVAT 243 (320)
Q Consensus 202 ~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T 243 (320)
......|+.||...+.+.+. ..|+++..+.|+.+-.
T Consensus 145 ~~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~G 180 (657)
T PRK07201 145 QGLPTPYHRTKFEAEKLVRE------ECGLPWRVYRPAVVVG 180 (657)
T ss_pred cCCCCchHHHHHHHHHHHHH------cCCCcEEEEcCCeeee
Confidence 11235699999999988753 2579999999998854
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.27 E-value=8.9e-11 Score=103.67 Aligned_cols=166 Identities=20% Similarity=0.217 Sum_probs=99.9
Q ss_pred EECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHH---HHHHHHHHHhhc--------CCceEEEEEEeCCCCc----HHH
Q 020854 58 VTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDK---LKDVSDSIQAKY--------AKTQIKSVVVDFSGDL----DEG 120 (320)
Q Consensus 58 ITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~---~~~~~~~l~~~~--------~~~~~~~~~~D~~~~~----~~~ 120 (320)
||||||.||..+.++|++++. +|+++.|..+. .+.+.+.+.+.. ...++.++..|++++. ++.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999986 89999997633 222222222110 1568999999999852 233
Q ss_pred HHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC
Q 020854 121 VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP 200 (320)
Q Consensus 121 ~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~ 200 (320)
.+.+.+ .+|+|||+|+...- .. .+++..++|+.|+.++++.+.. .+..+++++||.......
T Consensus 81 ~~~L~~-----~v~~IiH~Aa~v~~-~~--------~~~~~~~~NV~gt~~ll~la~~----~~~~~~~~iSTa~v~~~~ 142 (249)
T PF07993_consen 81 YQELAE-----EVDVIIHCAASVNF-NA--------PYSELRAVNVDGTRNLLRLAAQ----GKRKRFHYISTAYVAGSR 142 (249)
T ss_dssp HHHHHH-----H--EEEE--SS-SB-S---------S--EEHHHHHHHHHHHHHHHTS----SS---EEEEEEGGGTTS-
T ss_pred hhcccc-----ccceeeecchhhhh-cc--------cchhhhhhHHHHHHHHHHHHHh----ccCcceEEeccccccCCC
Confidence 344433 46699999997642 11 1344678999999999999863 233489999993221100
Q ss_pred C------------------CCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecC
Q 020854 201 S------------------DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATK 244 (320)
Q Consensus 201 ~------------------~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~ 244 (320)
. ......|..||...+.+.+..+.+ .|+.+..+.||.|-..
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~---~g~p~~I~Rp~~i~g~ 201 (249)
T PF07993_consen 143 PGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQR---HGLPVTIYRPGIIVGD 201 (249)
T ss_dssp TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHH---H---EEEEEE-EEE-S
T ss_pred CCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhc---CCceEEEEecCccccc
Confidence 0 112357999999999999888765 4789999999999773
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.7e-09 Score=104.50 Aligned_cols=172 Identities=17% Similarity=0.165 Sum_probs=114.6
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC---eEEEEeCCHHH---HHHHHHH---------HHhhcC-------CceEEE
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGL---NLVLVGRNPDK---LKDVSDS---------IQAKYA-------KTQIKS 108 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~---~Vil~~r~~~~---~~~~~~~---------l~~~~~-------~~~~~~ 108 (320)
.+||+|+||||||.||..++++|++.+. +|+++.|.... .+....+ +++..+ ..++.+
T Consensus 9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~ 88 (491)
T PLN02996 9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP 88 (491)
T ss_pred hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence 5699999999999999999999997653 67888886531 1111111 111111 157899
Q ss_pred EEEeCCCCc-----HHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC
Q 020854 109 VVVDFSGDL-----DEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR 183 (320)
Q Consensus 109 ~~~D~~~~~-----~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~ 183 (320)
+..|+++.. .+..+.+.+ ++|+|||+|+.... . +..+..+++|+.|+.++++.+... .
T Consensus 89 i~GDl~~~~LGLs~~~~~~~l~~-----~vD~ViH~AA~v~~-----~----~~~~~~~~~Nv~gt~~ll~~a~~~---~ 151 (491)
T PLN02996 89 VPGDISYDDLGVKDSNLREEMWK-----EIDIVVNLAATTNF-----D----ERYDVALGINTLGALNVLNFAKKC---V 151 (491)
T ss_pred EecccCCcCCCCChHHHHHHHHh-----CCCEEEECccccCC-----c----CCHHHHHHHHHHHHHHHHHHHHhc---C
Confidence 999998531 122333332 36699999997532 1 124667899999999999987542 1
Q ss_pred CCcEEEEEcCccccccCC-----------C-------------------------------------------------C
Q 020854 184 KKGAIVNIGSGAAIVIPS-----------D-------------------------------------------------P 203 (320)
Q Consensus 184 ~~g~Iv~vsS~~~~~~~~-----------~-------------------------------------------------~ 203 (320)
+..++|++||........ . .
T Consensus 152 ~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (491)
T PLN02996 152 KVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHG 231 (491)
T ss_pred CCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCC
Confidence 235899999976542100 0 0
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecC
Q 020854 204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATK 244 (320)
Q Consensus 204 ~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~ 244 (320)
....|+.||++.+.+++..+ .|+.+..+.|+.|-.+
T Consensus 232 ~pn~Y~~TK~~aE~lv~~~~-----~~lpv~i~RP~~V~G~ 267 (491)
T PLN02996 232 WPNTYVFTKAMGEMLLGNFK-----ENLPLVIIRPTMITST 267 (491)
T ss_pred CCCchHhhHHHHHHHHHHhc-----CCCCEEEECCCEeccC
Confidence 01349999999999986542 3799999999888554
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.8e-09 Score=109.09 Aligned_cols=156 Identities=19% Similarity=0.229 Sum_probs=110.0
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeE
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG 134 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 134 (320)
+++||||+|+||++++++|+++|++|++++|+.... . ...+.++.+|+.|. +.+.++ +.+ +|
T Consensus 2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~-----~~~v~~v~gDL~D~--~~l~~a---l~~--vD 63 (854)
T PRK05865 2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W-----PSSADFIAADIRDA--TAVESA---MTG--AD 63 (854)
T ss_pred EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c-----ccCceEEEeeCCCH--HHHHHH---HhC--CC
Confidence 599999999999999999999999999999985321 1 12467888999876 333333 333 56
Q ss_pred EEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHHHHHH
Q 020854 135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAY 214 (320)
Q Consensus 135 ~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaa 214 (320)
+|||+|+...+ .+++|+.++.++++++ .+.+.++||++||.. |.+
T Consensus 64 ~VVHlAa~~~~---------------~~~vNv~GT~nLLeAa----~~~gvkr~V~iSS~~----------------K~a 108 (854)
T PRK05865 64 VVAHCAWVRGR---------------NDHINIDGTANVLKAM----AETGTGRIVFTSSGH----------------QPR 108 (854)
T ss_pred EEEECCCcccc---------------hHHHHHHHHHHHHHHH----HHcCCCeEEEECCcH----------------HHH
Confidence 99999975321 3578999988877664 445567999999842 777
Q ss_pred HHHHHHHHHHHHccCCceEEEEeccceecCCCc----c----c--cC-----CCCCCCHHHHHHHHHHHhC
Q 020854 215 IDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS----I----K--RS-----SFFVPSTDVYARAAMRWIG 270 (320)
Q Consensus 215 l~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~----~----~--~~-----~~~~~~~~~~a~~i~~~l~ 270 (320)
.+.+.+ ..|+.+..+.|+.+-.+-.. . . .. .......+++++.++..+.
T Consensus 109 aE~ll~-------~~gl~~vILRp~~VYGP~~~~~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~ 172 (854)
T PRK05865 109 VEQMLA-------DCGLEWVAVRCALIFGRNVDNWVQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALL 172 (854)
T ss_pred HHHHHH-------HcCCCEEEEEeceEeCCChHHHHHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHh
Confidence 666553 24788999998887654211 0 0 00 0124678999999988874
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.09 E-value=6.3e-10 Score=100.28 Aligned_cols=144 Identities=19% Similarity=0.240 Sum_probs=95.5
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeE
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG 134 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 134 (320)
++|||||+|-||.++.+.|.++|++|+.++|+ ++|+.|. +.+.++.+.. ++|
T Consensus 2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-----------------------~~dl~d~--~~~~~~~~~~---~pd 53 (286)
T PF04321_consen 2 RILITGASGFLGSALARALKERGYEVIATSRS-----------------------DLDLTDP--EAVAKLLEAF---KPD 53 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-----------------------CS-TTSH--HHHHHHHHHH-----S
T ss_pred EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-----------------------hcCCCCH--HHHHHHHHHh---CCC
Confidence 68999999999999999999999999999877 5566664 4444444443 477
Q ss_pred EEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC---------CCCCc
Q 020854 135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------SDPLY 205 (320)
Q Consensus 135 ~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~---------~~~~~ 205 (320)
+|||+||.... +.-.++-+..+.+|+.++..+.+.+.. .+.++|++||..-+.+. .....
T Consensus 54 ~Vin~aa~~~~------~~ce~~p~~a~~iN~~~~~~la~~~~~-----~~~~li~~STd~VFdG~~~~~y~E~d~~~P~ 122 (286)
T PF04321_consen 54 VVINCAAYTNV------DACEKNPEEAYAINVDATKNLAEACKE-----RGARLIHISTDYVFDGDKGGPYTEDDPPNPL 122 (286)
T ss_dssp EEEE------H------HHHHHSHHHHHHHHTHHHHHHHHHHHH-----CT-EEEEEEEGGGS-SSTSSSB-TTS----S
T ss_pred eEeccceeecH------HhhhhChhhhHHHhhHHHHHHHHHHHH-----cCCcEEEeeccEEEcCCcccccccCCCCCCC
Confidence 99999997643 112223466789999999999999754 35689999997554321 01124
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecC
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATK 244 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~ 244 (320)
..|+.+|...+...+... -+...+.++++-.+
T Consensus 123 ~~YG~~K~~~E~~v~~~~-------~~~~IlR~~~~~g~ 154 (286)
T PF04321_consen 123 NVYGRSKLEGEQAVRAAC-------PNALILRTSWVYGP 154 (286)
T ss_dssp SHHHHHHHHHHHHHHHH--------SSEEEEEE-SEESS
T ss_pred CHHHHHHHHHHHHHHHhc-------CCEEEEecceeccc
Confidence 689999999988877621 26667777777655
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.06 E-value=4.3e-09 Score=95.45 Aligned_cols=133 Identities=16% Similarity=0.158 Sum_probs=85.0
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
.+.+|||||+|.||..+++.|.++|++|+...++. .+. + .+...+...+
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~~~--------------------------~~~--~---~v~~~l~~~~ 57 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSGRL--------------------------ENR--A---SLEADIDAVK 57 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCEEEEecCcc--------------------------CCH--H---HHHHHHHhcC
Confidence 47799999999999999999999999987543221 111 1 1222222235
Q ss_pred eEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcc--ccc------------
Q 020854 133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGA--AIV------------ 198 (320)
Q Consensus 133 id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~--~~~------------ 198 (320)
+|+|||.||.... ... +...+.-...+++|+.|+.++++++... +- +.+.+||.. +..
T Consensus 58 ~D~ViH~Aa~~~~--~~~-~~~~~~p~~~~~~Nv~gt~~ll~aa~~~----gv-~~v~~sS~~vy~~~~~~p~~~~~~~~ 129 (298)
T PLN02778 58 PTHVFNAAGVTGR--PNV-DWCESHKVETIRANVVGTLTLADVCRER----GL-VLTNYATGCIFEYDDAHPLGSGIGFK 129 (298)
T ss_pred CCEEEECCcccCC--CCc-hhhhhCHHHHHHHHHHHHHHHHHHHHHh----CC-CEEEEecceEeCCCCCCCcccCCCCC
Confidence 7799999997643 111 1112234678899999999999998542 22 344454432 110
Q ss_pred --cCCCCCchhhHHHHHHHHHHHHHHHH
Q 020854 199 --IPSDPLYSVYAATKAYIDQFSRSLYV 224 (320)
Q Consensus 199 --~~~~~~~~~Y~asKaal~~~~~~l~~ 224 (320)
.++.+....|+.||.+.+.+++..+.
T Consensus 130 Ee~~p~~~~s~Yg~sK~~~E~~~~~y~~ 157 (298)
T PLN02778 130 EEDTPNFTGSFYSKTKAMVEELLKNYEN 157 (298)
T ss_pred cCCCCCCCCCchHHHHHHHHHHHHHhhc
Confidence 01112235799999999999887653
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.03 E-value=2.3e-08 Score=89.90 Aligned_cols=185 Identities=14% Similarity=0.086 Sum_probs=109.0
Q ss_pred EEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeEE
Q 020854 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGV 135 (320)
Q Consensus 56 vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 135 (320)
|+||||+|.||..++++|+++|++|++++|+.++..... . ... .|... ....+.+. ++|+
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~--~~~--~~~~~------~~~~~~~~--~~D~ 60 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK--------W--EGY--KPWAP------LAESEALE--GADA 60 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc--------c--eee--ecccc------cchhhhcC--CCCE
Confidence 689999999999999999999999999999876533210 0 001 11111 11222333 4669
Q ss_pred EEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCC--cEEEEEcCccccccC---CC-----C-C
Q 020854 136 LINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKK--GAIVNIGSGAAIVIP---SD-----P-L 204 (320)
Q Consensus 136 lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~--g~Iv~vsS~~~~~~~---~~-----~-~ 204 (320)
|||+||.... ..+.+.+.....+++|+.++.++.+++.. .+. ..++..||...+... +. + .
T Consensus 61 Vvh~a~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~ 132 (292)
T TIGR01777 61 VINLAGEPIA----DKRWTEERKQEIRDSRIDTTRALVEAIAA----AEQKPKVFISASAVGYYGTSEDRVFTEEDSPAG 132 (292)
T ss_pred EEECCCCCcc----cccCCHHHHHHHHhcccHHHHHHHHHHHh----cCCCceEEEEeeeEEEeCCCCCCCcCcccCCCC
Confidence 9999996432 11234445567788999999888888643 332 245545543222100 00 0 1
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc-----------c--c-----cCCCCCCCHHHHHHHHH
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS-----------I--K-----RSSFFVPSTDVYARAAM 266 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~-----------~--~-----~~~~~~~~~~~~a~~i~ 266 (320)
...|+..+...+...+ .+...++.+..+.|+.+-.+-.. . . .........+++++.+.
T Consensus 133 ~~~~~~~~~~~e~~~~----~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~ 208 (292)
T TIGR01777 133 DDFLAELCRDWEEAAQ----AAEDLGTRVVLLRTGIVLGPKGGALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLIL 208 (292)
T ss_pred CChHHHHHHHHHHHhh----hchhcCCceEEEeeeeEECCCcchhHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHH
Confidence 1123333333333322 23345799999999988655210 0 0 11124578999999999
Q ss_pred HHhCCC
Q 020854 267 RWIGYE 272 (320)
Q Consensus 267 ~~l~~~ 272 (320)
..+..+
T Consensus 209 ~~l~~~ 214 (292)
T TIGR01777 209 FALENA 214 (292)
T ss_pred HHhcCc
Confidence 998764
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.7e-08 Score=89.24 Aligned_cols=170 Identities=16% Similarity=0.145 Sum_probs=115.6
Q ss_pred EEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeEE
Q 020854 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGV 135 (320)
Q Consensus 56 vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 135 (320)
+||||++|-+|.++++.|. .+.+|+.++|.. +|++|. + .+.+.+.+.++|+
T Consensus 3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-----------------------~Ditd~--~---~v~~~i~~~~PDv 53 (281)
T COG1091 3 ILITGANGQLGTELRRALP-GEFEVIATDRAE-----------------------LDITDP--D---AVLEVIRETRPDV 53 (281)
T ss_pred EEEEcCCChHHHHHHHHhC-CCceEEeccCcc-----------------------ccccCh--H---HHHHHHHhhCCCE
Confidence 8999999999999999999 668999888764 688876 3 3444444446889
Q ss_pred EEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCC---------CCCch
Q 020854 136 LINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS---------DPLYS 206 (320)
Q Consensus 136 lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~---------~~~~~ 206 (320)
|||+|+...- +.-+.+-+..+.+|..|+.++++++-. -+..+|.+|+-.-+.+.. .....
T Consensus 54 VIn~AAyt~v------D~aE~~~e~A~~vNa~~~~~lA~aa~~-----~ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~n 122 (281)
T COG1091 54 VINAAAYTAV------DKAESEPELAFAVNATGAENLARAAAE-----VGARLVHISTDYVFDGEKGGPYKETDTPNPLN 122 (281)
T ss_pred EEECcccccc------ccccCCHHHHHHhHHHHHHHHHHHHHH-----hCCeEEEeecceEecCCCCCCCCCCCCCCChh
Confidence 9999998653 112222467789999999999999754 356899999866554211 11246
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCC---------cc---------ccCCCCCCCHHHHHHHHHHH
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMA---------SI---------KRSSFFVPSTDVYARAAMRW 268 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~---------~~---------~~~~~~~~~~~~~a~~i~~~ 268 (320)
.|+.||.+-+..++.... +...+...++-..-. .. ...-......+++|+.+...
T Consensus 123 vYG~sKl~GE~~v~~~~~-------~~~I~Rtswv~g~~g~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~l 195 (281)
T COG1091 123 VYGRSKLAGEEAVRAAGP-------RHLILRTSWVYGEYGNNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILEL 195 (281)
T ss_pred hhhHHHHHHHHHHHHhCC-------CEEEEEeeeeecCCCCCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHH
Confidence 799999999998877642 223333333322211 10 01111245788999999997
Q ss_pred hCCC
Q 020854 269 IGYE 272 (320)
Q Consensus 269 l~~~ 272 (320)
+...
T Consensus 196 l~~~ 199 (281)
T COG1091 196 LEKE 199 (281)
T ss_pred Hhcc
Confidence 7765
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.01 E-value=1e-08 Score=93.02 Aligned_cols=173 Identities=18% Similarity=0.196 Sum_probs=115.7
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcC-CeEEEEeCCHH---HHHHHHHHHH-----hhcCCceEEEEEEeCCCCcHHHHHHH
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPD---KLKDVSDSIQ-----AKYAKTQIKSVVVDFSGDLDEGVERI 124 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G-~~Vil~~r~~~---~~~~~~~~l~-----~~~~~~~~~~~~~D~~~~~~~~~~~~ 124 (320)
+++++|||||-+|+-+..+|..+- ++|++..|-.+ ..+.+.+.+. +.....++..+..|+++..-..-+.-
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 579999999999999999998764 59999988443 2222222222 11225689999999996431111222
Q ss_pred HHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccccc-----
Q 020854 125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI----- 199 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~----- 199 (320)
.+.+.. .+|.+|||++...- .. + ..+....|+.|+..+++.+.- .+...+.+|||++....
T Consensus 81 ~~~La~-~vD~I~H~gA~Vn~-v~-----p---Ys~L~~~NVlGT~evlrLa~~----gk~Kp~~yVSsisv~~~~~~~~ 146 (382)
T COG3320 81 WQELAE-NVDLIIHNAALVNH-VF-----P---YSELRGANVLGTAEVLRLAAT----GKPKPLHYVSSISVGETEYYSN 146 (382)
T ss_pred HHHHhh-hcceEEecchhhcc-cC-----c---HHHhcCcchHhHHHHHHHHhc----CCCceeEEEeeeeeccccccCC
Confidence 222222 47799999987531 11 1 355568899999999988743 23345999999876541
Q ss_pred -------------CCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecC
Q 020854 200 -------------PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATK 244 (320)
Q Consensus 200 -------------~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~ 244 (320)
........|+.||.+.+-+++.... .|.++..+.||+|-.+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~----rGLpv~I~Rpg~I~gd 200 (382)
T COG3320 147 FTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGD----RGLPVTIFRPGYITGD 200 (382)
T ss_pred CccccccccccccccCccCCCcchhHHHHHHHHHHHhh----cCCCeEEEecCeeecc
Confidence 0111236799999998888776543 4899999999998444
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.1e-07 Score=79.45 Aligned_cols=163 Identities=16% Similarity=0.148 Sum_probs=106.7
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHcCC
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEGL 131 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~ 131 (320)
++++||||| |+|.+++++|+++|++|++++|+.++.+.....+.. ...+..+.+|++|. +...++...+..+
T Consensus 1 m~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~---~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g-- 74 (177)
T PRK08309 1 MHALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT---PESITPLPLDYHDDDALKLAIKSTIEKNG-- 74 (177)
T ss_pred CEEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc---CCcEEEEEccCCCHHHHHHHHHHHHHHcC--
Confidence 368999998 788889999999999999999998877666554532 34678889999985 2344455544445
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHHH
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAAT 211 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~as 211 (320)
.+|++|+.+-...+ -.+..++-..-.+.+.-+++.+=...+.. +
T Consensus 75 ~id~lv~~vh~~~~------------------------~~~~~~~~~~gv~~~~~~~~h~~gs~~~~----~-------- 118 (177)
T PRK08309 75 PFDLAVAWIHSSAK------------------------DALSVVCRELDGSSETYRLFHVLGSAASD----P-------- 118 (177)
T ss_pred CCeEEEEeccccch------------------------hhHHHHHHHHccCCCCceEEEEeCCcCCc----h--------
Confidence 45688877654321 12223332222222333666664333321 1
Q ss_pred HHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCC
Q 020854 212 KAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 212 Kaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
+..+..+...+..-.-|..|++..+-.. .|.+-||+++-+++++..+
T Consensus 119 --------~~~~~~~~~~~~~~~~i~lgf~~~~~~~------rwlt~~ei~~gv~~~~~~~ 165 (177)
T PRK08309 119 --------RIPSEKIGPARCSYRRVILGFVLEDTYS------RWLTHEEISDGVIKAIESD 165 (177)
T ss_pred --------hhhhhhhhhcCCceEEEEEeEEEeCCcc------ccCchHHHHHHHHHHHhcC
Confidence 2222333445567778889999876543 4789999999999999876
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=98.93 E-value=4e-08 Score=88.37 Aligned_cols=166 Identities=13% Similarity=0.099 Sum_probs=101.0
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC-C-
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL-D- 132 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~- 132 (320)
+++||||||.+|+.++++|.++|++|.+++|+.++.. ...+....+|..|. +.+....+..... .
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~-----------~~~~~~~~~d~~d~--~~l~~a~~~~~~~~g~ 67 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA-----------GPNEKHVKFDWLDE--DTWDNPFSSDDGMEPE 67 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc-----------CCCCccccccCCCH--HHHHHHHhcccCcCCc
Confidence 3899999999999999999999999999999987532 11244566788775 4443333221211 3
Q ss_pred eEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHHHH
Q 020854 133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATK 212 (320)
Q Consensus 133 id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asK 212 (320)
+|.++++++.... . .+ ..+.++...++.+-.+||++||..... +.+ ++
T Consensus 68 ~d~v~~~~~~~~~---------~--~~------------~~~~~i~aa~~~gv~~~V~~Ss~~~~~--~~~-------~~ 115 (285)
T TIGR03649 68 ISAVYLVAPPIPD---------L--AP------------PMIKFIDFARSKGVRRFVLLSASIIEK--GGP-------AM 115 (285)
T ss_pred eeEEEEeCCCCCC---------h--hH------------HHHHHHHHHHHcCCCEEEEeeccccCC--CCc-------hH
Confidence 6789888763210 0 01 112334445556667999999865433 211 22
Q ss_pred HHHHHHHHHHHHHHccCCceEEEEeccceecCCCc----------c------ccCCCCCCCHHHHHHHHHHHhCC
Q 020854 213 AYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS----------I------KRSSFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 213 aal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~----------~------~~~~~~~~~~~~~a~~i~~~l~~ 271 (320)
...+.+.+. ..|+....+.|+++..++.. . ......+.+.+++|+.+...+..
T Consensus 116 ~~~~~~l~~------~~gi~~tilRp~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~ 184 (285)
T TIGR03649 116 GQVHAHLDS------LGGVEYTVLRPTWFMENFSEEFHVEAIRKENKIYSATGDGKIPFVSADDIARVAYRALTD 184 (285)
T ss_pred HHHHHHHHh------ccCCCEEEEeccHHhhhhcccccccccccCCeEEecCCCCccCcccHHHHHHHHHHHhcC
Confidence 222222211 13899999999876543311 0 01122367888999988887764
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.3e-08 Score=92.95 Aligned_cols=170 Identities=16% Similarity=0.181 Sum_probs=113.5
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G--~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
++.+++||||+|-+|+.++++|.++| .+|.+.|.......-..+.... ....+..+.+|+.|. ..+.+.+.
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~--~~~~v~~~~~D~~~~-----~~i~~a~~ 75 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGF--RSGRVTVILGDLLDA-----NSISNAFQ 75 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcc--cCCceeEEecchhhh-----hhhhhhcc
Confidence 46899999999999999999999998 6899998876421111111110 156788888998876 55555555
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC---------
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP--------- 200 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~--------- 200 (320)
+. .+||+|....+ +.-..+-+..+++|+.|+.+++..+.. .+..++|++||..-.+..
T Consensus 76 ~~---~Vvh~aa~~~~------~~~~~~~~~~~~vNV~gT~nvi~~c~~----~~v~~lIYtSs~~Vvf~g~~~~n~~E~ 142 (361)
T KOG1430|consen 76 GA---VVVHCAASPVP------DFVENDRDLAMRVNVNGTLNVIEACKE----LGVKRLIYTSSAYVVFGGEPIINGDES 142 (361)
T ss_pred Cc---eEEEeccccCc------cccccchhhheeecchhHHHHHHHHHH----hCCCEEEEecCceEEeCCeecccCCCC
Confidence 43 45555543322 112223467789999998888888654 566789999998776521
Q ss_pred -CCC--CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecC
Q 020854 201 -SDP--LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATK 244 (320)
Q Consensus 201 -~~~--~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~ 244 (320)
+.| ....|+.||+-.+.+++.... ..+..-.++.|-.|-.|
T Consensus 143 ~p~p~~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGp 186 (361)
T KOG1430|consen 143 LPYPLKHIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIYGP 186 (361)
T ss_pred CCCccccccccchHHHHHHHHHHHhcC---CCCeeEEEEccccccCC
Confidence 112 125899999998888877664 23456666777555443
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=98.91 E-value=6.6e-08 Score=94.87 Aligned_cols=130 Identities=17% Similarity=0.210 Sum_probs=88.6
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC---eEEEEeCCHHH--H-HHHHHH---------HHhhcC-------CceEEE
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGL---NLVLVGRNPDK--L-KDVSDS---------IQAKYA-------KTQIKS 108 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~---~Vil~~r~~~~--~-~~~~~~---------l~~~~~-------~~~~~~ 108 (320)
.+||+|+||||||-||..++++|++.+. +|+++.|.... . +...++ +++..+ ..++..
T Consensus 117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~ 196 (605)
T PLN02503 117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP 196 (605)
T ss_pred hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence 4689999999999999999999998763 67888885432 1 122112 223222 247889
Q ss_pred EEEeCCCCc----HHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC
Q 020854 109 VVVDFSGDL----DEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK 184 (320)
Q Consensus 109 ~~~D~~~~~----~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~ 184 (320)
+..|+++.. ++..+.+.+ ++|+|||+|+.... + +..+..+++|+.|+.++++.+... .+
T Consensus 197 v~GDl~d~~LGLs~~~~~~L~~-----~vDiVIH~AA~v~f------~---~~~~~a~~vNV~GT~nLLelA~~~---~~ 259 (605)
T PLN02503 197 VVGNVCESNLGLEPDLADEIAK-----EVDVIINSAANTTF------D---ERYDVAIDINTRGPCHLMSFAKKC---KK 259 (605)
T ss_pred EEeeCCCcccCCCHHHHHHHHh-----cCCEEEECcccccc------c---cCHHHHHHHHHHHHHHHHHHHHHc---CC
Confidence 999999852 223333332 36799999987531 1 235677899999999999987542 12
Q ss_pred CcEEEEEcCcccc
Q 020854 185 KGAIVNIGSGAAI 197 (320)
Q Consensus 185 ~g~Iv~vsS~~~~ 197 (320)
..++|++||....
T Consensus 260 lk~fV~vSTayVy 272 (605)
T PLN02503 260 LKLFLQVSTAYVN 272 (605)
T ss_pred CCeEEEccCceee
Confidence 3578999886543
|
|
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=98.87 E-value=5.2e-09 Score=90.90 Aligned_cols=101 Identities=15% Similarity=0.118 Sum_probs=69.4
Q ss_pred CEEEEECC-CCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHcC
Q 020854 54 SWALVTGP-TDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEG 130 (320)
Q Consensus 54 k~vlITGa-s~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~ 130 (320)
.+=.||.. |||||+++|++|+++|++|+++++... +.. .. ...+|+.+. .++.++.+.+.++.
T Consensus 15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~---~~---~~~~Dv~d~~s~~~l~~~v~~~~g~ 80 (227)
T TIGR02114 15 SVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKP---EP---HPNLSIREIETTKDLLITLKELVQE 80 (227)
T ss_pred CceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------ccc---cc---CCcceeecHHHHHHHHHHHHHHcCC
Confidence 45566665 578999999999999999999986321 100 00 134677763 34555666666665
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHH
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~ 175 (320)
+|++|||||+... .++.+.+.++|+++ +..+.+.+.+.
T Consensus 81 --iDiLVnnAgv~d~--~~~~~~s~e~~~~~---~~~~~~~~~~~ 118 (227)
T TIGR02114 81 --HDILIHSMAVSDY--TPVYMTDLEQVQAS---DNLNEFLSKQN 118 (227)
T ss_pred --CCEEEECCEeccc--cchhhCCHHHHhhh---cchhhhhcccc
Confidence 5699999998643 56888899999866 44566666653
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=98.85 E-value=1e-07 Score=103.38 Aligned_cols=197 Identities=18% Similarity=0.105 Sum_probs=127.9
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcC----CeEEEEeCCHHHHH---HHHHHHHhhc-----CCceEEEEEEeCCCCc---
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTG----LNLVLVGRNPDKLK---DVSDSIQAKY-----AKTQIKSVVVDFSGDL--- 117 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G----~~Vil~~r~~~~~~---~~~~~l~~~~-----~~~~~~~~~~D~~~~~--- 117 (320)
.++|+||||+|.||..++++|+++| .+|+...|+..... ...+.+...+ ...++.++..|+++..
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence 5889999999999999999999887 78999999754322 2222221110 0136888899988641
Q ss_pred -HHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccc
Q 020854 118 -DEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAA 196 (320)
Q Consensus 118 -~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~ 196 (320)
.+..+++ .. .+|++||||+.... ..+ .......|+.|+.++++.+.. .+..+++++||.+.
T Consensus 1051 ~~~~~~~l---~~--~~d~iiH~Aa~~~~------~~~---~~~~~~~nv~gt~~ll~~a~~----~~~~~~v~vSS~~v 1112 (1389)
T TIGR03443 1051 SDEKWSDL---TN--EVDVIIHNGALVHW------VYP---YSKLRDANVIGTINVLNLCAE----GKAKQFSFVSSTSA 1112 (1389)
T ss_pred CHHHHHHH---Hh--cCCEEEECCcEecC------ccC---HHHHHHhHHHHHHHHHHHHHh----CCCceEEEEeCeee
Confidence 2222222 22 36699999986531 112 234456799999999988743 34458999999755
Q ss_pred cccC---------------C-----------CCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc---
Q 020854 197 IVIP---------------S-----------DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS--- 247 (320)
Q Consensus 197 ~~~~---------------~-----------~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~--- 247 (320)
.... + ......|+.||.+.+.+++..+. .|+.+..+.||.|-.+-..
T Consensus 1113 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~ 1188 (1389)
T TIGR03443 1113 LDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGCIVRPGYVTGDSKTGAT 1188 (1389)
T ss_pred cCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CCCCEEEECCCccccCCCcCCC
Confidence 4200 0 00124599999999988876432 4899999999988543211
Q ss_pred ----------------cccC----CCCCCCHHHHHHHHHHHhCC
Q 020854 248 ----------------IKRS----SFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 248 ----------------~~~~----~~~~~~~~~~a~~i~~~l~~ 271 (320)
...+ ...+...+++++.++..+..
T Consensus 1189 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~ 1232 (1389)
T TIGR03443 1189 NTDDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALN 1232 (1389)
T ss_pred CchhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhC
Confidence 0011 12256788999998887643
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=98.82 E-value=9.1e-08 Score=96.29 Aligned_cols=143 Identities=17% Similarity=0.161 Sum_probs=92.3
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
.+++|||||+|-||+++++.|.++|++|.... .|++|. +.+ .+.+...+
T Consensus 380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~~--------------------------~~l~d~--~~v---~~~i~~~~ 428 (668)
T PLN02260 380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEYGK--------------------------GRLEDR--SSL---LADIRNVK 428 (668)
T ss_pred CceEEEECCCchHHHHHHHHHHhCCCeEEeec--------------------------cccccH--HHH---HHHHHhhC
Confidence 36799999999999999999999998873211 123333 222 22233345
Q ss_pred eEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccccc-------------
Q 020854 133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI------------- 199 (320)
Q Consensus 133 id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~------------- 199 (320)
+|+|||+|+.... ... +...++-+..+++|+.|+.++++++... + .+.+++||...+..
T Consensus 429 pd~Vih~Aa~~~~--~~~-~~~~~~~~~~~~~N~~gt~~l~~a~~~~----g-~~~v~~Ss~~v~~~~~~~~~~~~~p~~ 500 (668)
T PLN02260 429 PTHVFNAAGVTGR--PNV-DWCESHKVETIRANVVGTLTLADVCREN----G-LLMMNFATGCIFEYDAKHPEGSGIGFK 500 (668)
T ss_pred CCEEEECCcccCC--CCC-ChHHhCHHHHHHHHhHHHHHHHHHHHHc----C-CeEEEEcccceecCCcccccccCCCCC
Confidence 7899999997642 111 2223344678899999999999998642 2 34566655332110
Q ss_pred ---CCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEe
Q 020854 200 ---PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQV 237 (320)
Q Consensus 200 ---~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~ 237 (320)
++.+....|+.||.+.+.+++.... ...+++..+.
T Consensus 501 E~~~~~~~~~~Yg~sK~~~E~~~~~~~~---~~~~r~~~~~ 538 (668)
T PLN02260 501 EEDKPNFTGSFYSKTKAMVEELLREYDN---VCTLRVRMPI 538 (668)
T ss_pred cCCCCCCCCChhhHHHHHHHHHHHhhhh---heEEEEEEec
Confidence 1112236799999999999877642 2356666665
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=2.2e-07 Score=87.14 Aligned_cols=176 Identities=16% Similarity=0.140 Sum_probs=108.5
Q ss_pred cCCCEEEEE----CCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-------HHHHhhcCCceEEEEEEeCCCCcHH
Q 020854 51 KYGSWALVT----GPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVS-------DSIQAKYAKTQIKSVVVDFSGDLDE 119 (320)
Q Consensus 51 ~~gk~vlIT----Gas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~-------~~l~~~~~~~~~~~~~~D~~~~~~~ 119 (320)
...+.|+|| ||+|.||..++++|+++|++|++++|+........ +++. ...+..+..|+.|
T Consensus 50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~----~~~v~~v~~D~~d---- 121 (378)
T PLN00016 50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS----SAGVKTVWGDPAD---- 121 (378)
T ss_pred cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh----hcCceEEEecHHH----
Confidence 345789999 99999999999999999999999999875432211 1121 1236677777754
Q ss_pred HHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccccc
Q 020854 120 GVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI 199 (320)
Q Consensus 120 ~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~ 199 (320)
++ +.+...++|+||+++|.. .+ ++ +.++...++.+-.++|++||...+..
T Consensus 122 -~~---~~~~~~~~d~Vi~~~~~~-----------~~-----------~~----~~ll~aa~~~gvkr~V~~SS~~vyg~ 171 (378)
T PLN00016 122 -VK---SKVAGAGFDVVYDNNGKD-----------LD-----------EV----EPVADWAKSPGLKQFLFCSSAGVYKK 171 (378)
T ss_pred -HH---hhhccCCccEEEeCCCCC-----------HH-----------HH----HHHHHHHHHcCCCEEEEEccHhhcCC
Confidence 12 222223577999987521 11 11 22333344455669999999765431
Q ss_pred CCC-CC-----chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc-------------cc---cCC-----
Q 020854 200 PSD-PL-----YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS-------------IK---RSS----- 252 (320)
Q Consensus 200 ~~~-~~-----~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~-------------~~---~~~----- 252 (320)
... +. ...+. +|...+.+.+ ..++.+..+.|+.+-.+... .. .+.
T Consensus 172 ~~~~p~~E~~~~~p~~-sK~~~E~~l~-------~~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~ 243 (378)
T PLN00016 172 SDEPPHVEGDAVKPKA-GHLEVEAYLQ-------KLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQL 243 (378)
T ss_pred CCCCCCCCCCcCCCcc-hHHHHHHHHH-------HcCCCeEEEeceeEECCCCCCchHHHHHHHHHcCCceeecCCCCee
Confidence 100 10 01122 7877776543 34789999999988765321 00 000
Q ss_pred CCCCCHHHHHHHHHHHhCCC
Q 020854 253 FFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 253 ~~~~~~~~~a~~i~~~l~~~ 272 (320)
......+++++.++..+..+
T Consensus 244 ~~~i~v~Dva~ai~~~l~~~ 263 (378)
T PLN00016 244 TQLGHVKDLASMFALVVGNP 263 (378)
T ss_pred eceecHHHHHHHHHHHhcCc
Confidence 12456899999999888653
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.9e-07 Score=81.25 Aligned_cols=186 Identities=18% Similarity=0.187 Sum_probs=112.5
Q ss_pred EEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeEE
Q 020854 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGV 135 (320)
Q Consensus 56 vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 135 (320)
++||||||-||++++.+|.+.|++|+++.|+..+.+... ...+. . .+.+.+. ...++|+
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~--------~~~v~--~----------~~~~~~~-~~~~~Da 59 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL--------HPNVT--L----------WEGLADA-LTLGIDA 59 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc--------Ccccc--c----------cchhhhc-ccCCCCE
Confidence 589999999999999999999999999999987654321 11111 0 1111111 1115779
Q ss_pred EEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccccCCCCCchhhHHHHHH
Q 020854 136 LINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYAATKAY 214 (320)
Q Consensus 136 lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaa 214 (320)
|||-||-.-. .+ ..+.+.=+.++ .+-+..++.+...+.+.+ +.++..-+|..|+. +......|--....
T Consensus 60 vINLAG~~I~-~r---rWt~~~K~~i~----~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyY--G~~~~~~~tE~~~~ 129 (297)
T COG1090 60 VINLAGEPIA-ER---RWTEKQKEEIR----QSRINTTEKLVELIAASETKPKVLISASAVGYY--GHSGDRVVTEESPP 129 (297)
T ss_pred EEECCCCccc-cc---cCCHHHHHHHH----HHHhHHHHHHHHHHHhccCCCcEEEecceEEEe--cCCCceeeecCCCC
Confidence 9999996442 11 13444333333 355666677776666433 45566666777766 32233233222222
Q ss_pred HHHHHHHHHHHH-------ccCCceEEEEeccceecCCCc------------------cccCCCCCCCHHHHHHHHHHHh
Q 020854 215 IDQFSRSLYVEY-------RKSGIDVQCQVPLYVATKMAS------------------IKRSSFFVPSTDVYARAAMRWI 269 (320)
Q Consensus 215 l~~~~~~l~~el-------~~~gi~v~~v~PG~v~T~~~~------------------~~~~~~~~~~~~~~a~~i~~~l 269 (320)
-+.|...+.+++ ...|.||..+.-|.|-++--. ....-..|+.-|++.+.|...+
T Consensus 130 g~~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll 209 (297)
T COG1090 130 GDDFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLL 209 (297)
T ss_pred CCChHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHH
Confidence 333444443333 245899999999998664211 0112234789999999999988
Q ss_pred CCC
Q 020854 270 GYE 272 (320)
Q Consensus 270 ~~~ 272 (320)
...
T Consensus 210 ~~~ 212 (297)
T COG1090 210 ENE 212 (297)
T ss_pred hCc
Confidence 764
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.71 E-value=3.4e-08 Score=85.98 Aligned_cols=175 Identities=19% Similarity=0.147 Sum_probs=119.5
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhh--cCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAK--YAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
.+|++||||=||-=|.-+|+.|.++|+.|..+.|.........-.+... -.+.+++...+|++|. ..+.++.+
T Consensus 1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~--~~l~r~l~--- 75 (345)
T COG1089 1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDS--SNLLRILE--- 75 (345)
T ss_pred CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccch--HHHHHHHH---
Confidence 3699999999999999999999999999999888643322110011111 1255688999999997 44444444
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccc---------cC
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV---------IP 200 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~---------~~ 200 (320)
..++|-+.|-|+.+.- ..+.+.-+.+.+++..|+.++..+..-.- .++.++..-||..-+. ..
T Consensus 76 ~v~PdEIYNLaAQS~V------~vSFe~P~~T~~~~~iGtlrlLEaiR~~~--~~~~rfYQAStSE~fG~v~~~pq~E~T 147 (345)
T COG1089 76 EVQPDEIYNLAAQSHV------GVSFEQPEYTADVDAIGTLRLLEAIRILG--EKKTRFYQASTSELYGLVQEIPQKETT 147 (345)
T ss_pred hcCchhheeccccccc------cccccCcceeeeechhHHHHHHHHHHHhC--CcccEEEecccHHhhcCcccCccccCC
Confidence 4456677777776543 22333346677889999999998865432 2356676666643322 01
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHH---ccCCceEEEEecc
Q 020854 201 SDPLYSVYAATKAYIDQFSRSLYVEY---RKSGIDVQCQVPL 239 (320)
Q Consensus 201 ~~~~~~~Y~asKaal~~~~~~l~~el---~~~gi~v~~v~PG 239 (320)
|+...++|+++|......+...+.-+ +-.||-+|.=+|.
T Consensus 148 PFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~ 189 (345)
T COG1089 148 PFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPL 189 (345)
T ss_pred CCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCC
Confidence 34457899999999999998888775 3567888876664
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=3.4e-07 Score=87.85 Aligned_cols=129 Identities=21% Similarity=0.187 Sum_probs=91.1
Q ss_pred CCCEEE----EECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHH
Q 020854 52 YGSWAL----VTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA 127 (320)
Q Consensus 52 ~gk~vl----ITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 127 (320)
.|..++ |+||++|+|.++++.+...|++|+.+.+...+.. ..
T Consensus 33 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~---------------------~~------------- 78 (450)
T PRK08261 33 PGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWA---------------------AG------------- 78 (450)
T ss_pred CCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccc---------------------cC-------------
Confidence 456677 8999999999999999999999998776544110 00
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
...+++.+|.-+... .+.+++ .+.+..++..++.|. +.|+||+++|..+.. ....
T Consensus 79 -~~~~~~~~~~d~~~~---------~~~~~l--------~~~~~~~~~~l~~l~--~~griv~i~s~~~~~-----~~~~ 133 (450)
T PRK08261 79 -WGDRFGALVFDATGI---------TDPADL--------KALYEFFHPVLRSLA--PCGRVVVLGRPPEAA-----ADPA 133 (450)
T ss_pred -cCCcccEEEEECCCC---------CCHHHH--------HHHHHHHHHHHHhcc--CCCEEEEEccccccC-----CchH
Confidence 001233444322211 112222 244466777778774 468999999977753 2346
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccc
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLY 240 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~ 240 (320)
|+++|+++.+++++++.|+ +.|+++++|.|+.
T Consensus 134 ~~~akaal~gl~rsla~E~-~~gi~v~~i~~~~ 165 (450)
T PRK08261 134 AAAAQRALEGFTRSLGKEL-RRGATAQLVYVAP 165 (450)
T ss_pred HHHHHHHHHHHHHHHHHHh-hcCCEEEEEecCC
Confidence 9999999999999999999 7899999999985
|
|
| >COG4982 3-oxoacyl-[acyl-carrier protein] | Back alignment and domain information |
|---|
Probab=98.62 E-value=4.4e-06 Score=79.82 Aligned_cols=215 Identities=13% Similarity=0.068 Sum_probs=137.6
Q ss_pred ccccCCCEEEEECCC-CcHHHHHHHHHHHcCCeEEEEeCCHH-HHHHHHHHHHhhcC--CceEEEEEEeCCCCcHHHHHH
Q 020854 48 NLRKYGSWALVTGPT-DGIGKSFAFQLAKTGLNLVLVGRNPD-KLKDVSDSIQAKYA--KTQIKSVVVDFSGDLDEGVER 123 (320)
Q Consensus 48 ~~~~~gk~vlITGas-~GIG~ala~~l~~~G~~Vil~~r~~~-~~~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~ 123 (320)
.....++++|||||+ +.||.+++..|++.|++||++..+.+ +..+..+.+-..+. +..+..+..+..+. ..++.
T Consensus 391 ~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~Sy--sDVdA 468 (866)
T COG4982 391 GGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSY--SDVDA 468 (866)
T ss_pred CCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccch--hhHHH
Confidence 445668999999999 78999999999999999999876643 34556666655443 45677777887764 44444
Q ss_pred HHHHHcC----------------CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC---
Q 020854 124 IKEAIEG----------------LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK--- 184 (320)
Q Consensus 124 ~~~~~~~----------------~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~--- 184 (320)
+.+.++. .++|.++--|..... +.+.+..... +..+++-+.....++-.+.+.-..++
T Consensus 469 lIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~--G~l~~agsra-E~~~rilLw~V~Rliggl~~~~s~r~v~~ 545 (866)
T COG4982 469 LIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVS--GELADAGSRA-EFAMRILLWNVLRLIGGLKKQGSSRGVDT 545 (866)
T ss_pred HHHHhccccccccCCcceecccccCcceeeecccCCcc--CccccCCchH-HHHHHHHHHHHHHHHHHhhhhccccCccc
Confidence 4444321 247788877776543 3455554432 33455656666666665555333322
Q ss_pred CcEEEEEcCccccccCCCCCchhhHHHHHHHHHHHHHHHHHHc-cCCceEEEEecccee-cCCCcc--------ccCCCC
Q 020854 185 KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR-KSGIDVQCQVPLYVA-TKMASI--------KRSSFF 254 (320)
Q Consensus 185 ~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~~~~~l~~el~-~~gi~v~~v~PG~v~-T~~~~~--------~~~~~~ 254 (320)
.-+||.=.|-..-. +.+-.+|+-||++++.++--...|-. ...+.+..-.-||++ |.++.. .+....
T Consensus 546 R~hVVLPgSPNrG~---FGgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGLMg~Ndiiv~aiEk~GV~ 622 (866)
T COG4982 546 RLHVVLPGSPNRGM---FGGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGLMGHNDIIVAAIEKAGVR 622 (866)
T ss_pred ceEEEecCCCCCCc---cCCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccccccCCcchhHHHHHHhCce
Confidence 24666666643322 34567899999999999877766631 112444444578875 444431 344455
Q ss_pred CCCHHHHHHHHHHHhC
Q 020854 255 VPSTDVYARAAMRWIG 270 (320)
Q Consensus 255 ~~~~~~~a~~i~~~l~ 270 (320)
..+++++|..++..+.
T Consensus 623 tyS~~EmA~~LLgL~s 638 (866)
T COG4982 623 TYSTDEMAFNLLGLAS 638 (866)
T ss_pred ecCHHHHHHHHHhhcc
Confidence 6788888888887654
|
|
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=98.55 E-value=2.2e-07 Score=87.05 Aligned_cols=78 Identities=19% Similarity=0.302 Sum_probs=57.2
Q ss_pred cCCCEEEEECC---------------CCc-HHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCC
Q 020854 51 KYGSWALVTGP---------------TDG-IGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114 (320)
Q Consensus 51 ~~gk~vlITGa---------------s~G-IG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~ 114 (320)
++||+++|||| |+| +|+++|++|+++|++|++++++.+ ++ . ... ...+|++
T Consensus 186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-----~-----~~~--~~~~dv~ 252 (399)
T PRK05579 186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-----T-----PAG--VKRIDVE 252 (399)
T ss_pred cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-----C-----CCC--cEEEccC
Confidence 56999999999 555 999999999999999999998763 11 0 111 2356777
Q ss_pred CCcHHHHHHHHHHHcCCCeEEEEEccCCCC
Q 020854 115 GDLDEGVERIKEAIEGLDVGVLINNVGISY 144 (320)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~id~lI~nAG~~~ 144 (320)
+. ++..+.+.+.++. +|++|||||+..
T Consensus 253 ~~-~~~~~~v~~~~~~--~DilI~~Aav~d 279 (399)
T PRK05579 253 SA-QEMLDAVLAALPQ--ADIFIMAAAVAD 279 (399)
T ss_pred CH-HHHHHHHHHhcCC--CCEEEEcccccc
Confidence 53 3455666666664 559999999865
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.54 E-value=2.1e-06 Score=72.82 Aligned_cols=83 Identities=31% Similarity=0.422 Sum_probs=60.9
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
.++++++++|+||+|++|+++++.|+++|++|++++|+.+++++..+++.+.. + .....+|..+. +++.+.+
T Consensus 24 ~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~-~--~~~~~~~~~~~-----~~~~~~~ 95 (194)
T cd01078 24 KDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF-G--EGVGAVETSDD-----AARAAAI 95 (194)
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc-C--CcEEEeeCCCH-----HHHHHHH
Confidence 34669999999999999999999999999999999999999888888775433 2 22334565543 2333444
Q ss_pred cCCCeEEEEEccC
Q 020854 129 EGLDVGVLINNVG 141 (320)
Q Consensus 129 ~~~~id~lI~nAG 141 (320)
.+.| ++|++..
T Consensus 96 ~~~d--iVi~at~ 106 (194)
T cd01078 96 KGAD--VVFAAGA 106 (194)
T ss_pred hcCC--EEEECCC
Confidence 4445 7777554
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=6e-07 Score=80.96 Aligned_cols=85 Identities=18% Similarity=0.299 Sum_probs=61.0
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCe-EEEEeCCH---HHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLN-LVLVGRNP---DKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIK 125 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~-Vil~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 125 (320)
.++||+++|||| ||+|++++..|++.|++ |++++|+. ++.+++.+++.+.++ .+....+|+++. +++.
T Consensus 123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~--~~~~~~~d~~~~-----~~~~ 194 (289)
T PRK12548 123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVP--ECIVNVYDLNDT-----EKLK 194 (289)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCC--CceeEEechhhh-----hHHH
Confidence 356899999999 69999999999999996 99999996 677777777765433 233445666543 2223
Q ss_pred HHHcCCCeEEEEEccCCCC
Q 020854 126 EAIEGLDVGVLINNVGISY 144 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~ 144 (320)
+.+.. .|+||||.....
T Consensus 195 ~~~~~--~DilINaTp~Gm 211 (289)
T PRK12548 195 AEIAS--SDILVNATLVGM 211 (289)
T ss_pred hhhcc--CCEEEEeCCCCC
Confidence 33333 359999886543
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.52 E-value=5e-07 Score=91.19 Aligned_cols=163 Identities=16% Similarity=0.166 Sum_probs=122.9
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHH---HHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLK---DVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~---~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
.|..+|+||-||.|.++|+.|..+|+ .+++++|+.-+-- ..++..+++ +..+..-..|++.. .....+.+.-
T Consensus 1768 eksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~--GVqV~vsT~nitt~--~ga~~Li~~s 1843 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRR--GVQVQVSTSNITTA--EGARGLIEES 1843 (2376)
T ss_pred cceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhc--CeEEEEecccchhh--hhHHHHHHHh
Confidence 58899999999999999999999999 5888999864422 233444444 44444444444433 4445555554
Q ss_pred cCC-CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 129 EGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 129 ~~~-~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
... .+..++|-|.+..+ +.+++.+++.+++.-+..+.|+.++-+.-...-- .-..+|..||++.-+ +..+...
T Consensus 1844 ~kl~~vGGiFnLA~VLRD--~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~--~LdyFv~FSSvscGR--GN~GQtN 1917 (2376)
T KOG1202|consen 1844 NKLGPVGGIFNLAAVLRD--GLIENQTPKNFKDVAKPKYSGTINLDRVSREICP--ELDYFVVFSSVSCGR--GNAGQTN 1917 (2376)
T ss_pred hhcccccchhhHHHHHHh--hhhcccChhHHHhhhccceeeeeehhhhhhhhCc--ccceEEEEEeecccC--CCCcccc
Confidence 444 45588888888775 7899999999999999999999998877554332 235799999999988 7899999
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 020854 208 YAATKAYIDQFSRSLYVE 225 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~e 225 (320)
|+-+.++++.+.+.-+.+
T Consensus 1918 YG~aNS~MERiceqRr~~ 1935 (2376)
T KOG1202|consen 1918 YGLANSAMERICEQRRHE 1935 (2376)
T ss_pred cchhhHHHHHHHHHhhhc
Confidence 999999999999875554
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.3e-06 Score=86.86 Aligned_cols=162 Identities=15% Similarity=0.154 Sum_probs=104.0
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeE
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG 134 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 134 (320)
+++||||+|.||..++++|.++|++|++++|+.... . ...+.++.+|+.+. . +.+.+.+ +|
T Consensus 2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---------~--~~~ve~v~~Dl~d~--~----l~~al~~--~D 62 (699)
T PRK12320 2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---------L--DPRVDYVCASLRNP--V----LQELAGE--AD 62 (699)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---------c--cCCceEEEccCCCH--H----HHHHhcC--CC
Confidence 599999999999999999999999999999875421 0 23467888898865 2 2233333 56
Q ss_pred EEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHHHHHH
Q 020854 135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAY 214 (320)
Q Consensus 135 ~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaa 214 (320)
+|||.|+.... .. ..+|+.|+.++++++.. .+ .++|++||..+. + ..|..
T Consensus 63 ~VIHLAa~~~~--------~~------~~vNv~Gt~nLleAA~~----~G-vRiV~~SS~~G~-----~--~~~~~---- 112 (699)
T PRK12320 63 AVIHLAPVDTS--------AP------GGVGITGLAHVANAAAR----AG-ARLLFVSQAAGR-----P--ELYRQ---- 112 (699)
T ss_pred EEEEcCccCcc--------ch------hhHHHHHHHHHHHHHHH----cC-CeEEEEECCCCC-----C--ccccH----
Confidence 99999986321 01 14799999998888643 33 479999986432 1 11321
Q ss_pred HHHHHHHHHHHHccCCceEEEEeccceecCCCcc--------------ccCCCCCCCHHHHHHHHHHHhCCC
Q 020854 215 IDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI--------------KRSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 215 l~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~--------------~~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
.+.+-. ..++.+..+.|+.+-.+-... ..........+++++.++..+..+
T Consensus 113 ----aE~ll~---~~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~~pI~vIyVdDvv~alv~al~~~ 177 (699)
T PRK12320 113 ----AETLVS---TGWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSARPIRVLHLDDLVRFLVLALNTD 177 (699)
T ss_pred ----HHHHHH---hcCCCEEEEeCceecCCCCcccHhHHHHHHHHHHHcCCceEEEEHHHHHHHHHHHHhCC
Confidence 222222 234677777777775552110 001111247788899888887643
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.49 E-value=5.6e-07 Score=78.45 Aligned_cols=200 Identities=17% Similarity=0.070 Sum_probs=128.7
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcC--CeEEEEeC-CHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTG--LNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G--~~Vil~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
.+.++||||.|-||...+..++..= ++.+..+. +--.-.+..++.+. ..+..++..|+.++ ..+...+.
T Consensus 6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n---~p~ykfv~~di~~~-----~~~~~~~~ 77 (331)
T KOG0747|consen 6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRN---SPNYKFVEGDIADA-----DLVLYLFE 77 (331)
T ss_pred cceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhcc---CCCceEeeccccch-----HHHHhhhc
Confidence 3889999999999999999998763 45555442 11000112222222 56788999999887 33333344
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccccc----------
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI---------- 199 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~---------- 199 (320)
...+|.|||-|........ ..+. -.....|++++..+.+...... +-.++|.+|+-.-+..
T Consensus 78 ~~~id~vihfaa~t~vd~s-----~~~~-~~~~~nnil~t~~Lle~~~~sg---~i~~fvhvSTdeVYGds~~~~~~~E~ 148 (331)
T KOG0747|consen 78 TEEIDTVIHFAAQTHVDRS-----FGDS-FEFTKNNILSTHVLLEAVRVSG---NIRRFVHVSTDEVYGDSDEDAVVGEA 148 (331)
T ss_pred cCchhhhhhhHhhhhhhhh-----cCch-HHHhcCCchhhhhHHHHHHhcc---CeeEEEEecccceecCcccccccccc
Confidence 4467899999987653111 1111 3345789999999998876544 3457999998654431
Q ss_pred -CCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCC------c-------------cccCC---CCCC
Q 020854 200 -PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMA------S-------------IKRSS---FFVP 256 (320)
Q Consensus 200 -~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~------~-------------~~~~~---~~~~ 256 (320)
.+.| ...|++||+|.+++.+++...+ |+.|..+.-+-|-.|-. . .+.++ -.++
T Consensus 149 s~~nP-tnpyAasKaAaE~~v~Sy~~sy---~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l 224 (331)
T KOG0747|consen 149 SLLNP-TNPYAASKAAAEMLVRSYGRSY---GLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYL 224 (331)
T ss_pred ccCCC-CCchHHHHHHHHHHHHHHhhcc---CCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeE
Confidence 1222 3569999999999999999875 66676666555544422 1 01111 1256
Q ss_pred CHHHHHHHHHHHhCCCC
Q 020854 257 STDVYARAAMRWIGYEP 273 (320)
Q Consensus 257 ~~~~~a~~i~~~l~~~~ 273 (320)
-.|++.+++......+.
T Consensus 225 ~veD~~ea~~~v~~Kg~ 241 (331)
T KOG0747|consen 225 YVEDVSEAFKAVLEKGE 241 (331)
T ss_pred eHHHHHHHHHHHHhcCC
Confidence 78888888888777764
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=98.47 E-value=2.9e-06 Score=74.13 Aligned_cols=167 Identities=14% Similarity=0.123 Sum_probs=110.9
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
..+++++||||.|.||..++..|..+|+.||.+|--........+-+. ....+..+..|+... +..
T Consensus 25 ~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~---~~~~fel~~hdv~~p-------l~~---- 90 (350)
T KOG1429|consen 25 SQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWI---GHPNFELIRHDVVEP-------LLK---- 90 (350)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhc---cCcceeEEEeechhH-------HHH----
Confidence 557999999999999999999999999999998864433322222221 134455555555433 222
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC----------
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------- 200 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~---------- 200 (320)
.+|.++|-|...++. .+ ..++ -+++.+|+.++.+....+.. -+.|++..|+..-+..|
T Consensus 91 -evD~IyhLAapasp~--~y-~~np---vktIktN~igtln~lglakr-----v~aR~l~aSTseVYgdp~~hpq~e~yw 158 (350)
T KOG1429|consen 91 -EVDQIYHLAAPASPP--HY-KYNP---VKTIKTNVIGTLNMLGLAKR-----VGARFLLASTSEVYGDPLVHPQVETYW 158 (350)
T ss_pred -HhhhhhhhccCCCCc--cc-ccCc---cceeeecchhhHHHHHHHHH-----hCceEEEeecccccCCcccCCCccccc
Confidence 144677777776541 11 1111 45678899999998887643 34678888876554311
Q ss_pred ----CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCC
Q 020854 201 ----SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMA 246 (320)
Q Consensus 201 ----~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~ 246 (320)
+....+.|.-.|...+.++.+..++ .||.|....+--+-.|..
T Consensus 159 g~vnpigpr~cydegKr~aE~L~~~y~k~---~giE~rIaRifNtyGPrm 205 (350)
T KOG1429|consen 159 GNVNPIGPRSCYDEGKRVAETLCYAYHKQ---EGIEVRIARIFNTYGPRM 205 (350)
T ss_pred cccCcCCchhhhhHHHHHHHHHHHHhhcc---cCcEEEEEeeecccCCcc
Confidence 1223678999999999888877665 588888877766655543
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.44 E-value=4.1e-05 Score=62.91 Aligned_cols=181 Identities=17% Similarity=0.178 Sum_probs=121.2
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeE
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG 134 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 134 (320)
.+-|.||||-.|..++++..++|+.|+.+.||..++... ..+...+.|+.|. +.+.+.+.+.|
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~----------~~~~i~q~Difd~-----~~~a~~l~g~D-- 64 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR----------QGVTILQKDIFDL-----TSLASDLAGHD-- 64 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc----------ccceeecccccCh-----hhhHhhhcCCc--
Confidence 477899999999999999999999999999999986542 3466788898876 44455556544
Q ss_pred EEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC------CCC-Cchh
Q 020854 135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP------SDP-LYSV 207 (320)
Q Consensus 135 ~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~------~~~-~~~~ 207 (320)
+||..-|...+ +.+ .. +....+.++..++.....|++.|+...+.... ..| +-..
T Consensus 65 aVIsA~~~~~~--------~~~--~~--------~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~e 126 (211)
T COG2910 65 AVISAFGAGAS--------DND--EL--------HSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAE 126 (211)
T ss_pred eEEEeccCCCC--------Chh--HH--------HHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchh
Confidence 99988886532 111 10 11124556666666678899999887665420 011 1233
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc-----c-------ccCCCCCCCHHHHHHHHHHHhCCCC
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS-----I-------KRSSFFVPSTDVYARAAMRWIGYEP 273 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~-----~-------~~~~~~~~~~~~~a~~i~~~l~~~~ 273 (320)
|-..-.+..-+.+.|+.| .++..+-|+|...-.|--+ . .......++-+++|-++++-++++.
T Consensus 127 y~~~A~~~ae~L~~Lr~~---~~l~WTfvSPaa~f~PGerTg~yrlggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~ 201 (211)
T COG2910 127 YKPEALAQAEFLDSLRAE---KSLDWTFVSPAAFFEPGERTGNYRLGGDQLLVNAKGESRISYADYAIAVLDELEKPQ 201 (211)
T ss_pred HHHHHHHHHHHHHHHhhc---cCcceEEeCcHHhcCCccccCceEeccceEEEcCCCceeeeHHHHHHHHHHHHhccc
Confidence 444444444455677776 4588999999876555222 1 1223346799999999999999884
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.3e-06 Score=76.02 Aligned_cols=100 Identities=18% Similarity=0.166 Sum_probs=68.5
Q ss_pred CEEEEECCCCc-HHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 54 SWALVTGPTDG-IGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 54 k~vlITGas~G-IG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
.+-.||+.|+| ||+++|++|+++|++|++++|+.... .. +...+..+.++.. ++..+.+.+.++.
T Consensus 16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~--------~~-~~~~v~~i~v~s~---~~m~~~l~~~~~~-- 81 (229)
T PRK06732 16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK--------PE-PHPNLSIIEIENV---DDLLETLEPLVKD-- 81 (229)
T ss_pred CceeecCccchHHHHHHHHHHHhCCCEEEEEECccccc--------CC-CCCCeEEEEEecH---HHHHHHHHHHhcC--
Confidence 57788887766 99999999999999999998764210 00 0123445554322 2444555555554
Q ss_pred eEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHH
Q 020854 133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169 (320)
Q Consensus 133 id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~ 169 (320)
+|+||||||.... .+....+.+++..++++|.+..
T Consensus 82 ~DivIh~AAvsd~--~~~~~~~~~~~~~~~~v~~~~~ 116 (229)
T PRK06732 82 HDVLIHSMAVSDY--TPVYMTDLEEVSASDNLNEFLT 116 (229)
T ss_pred CCEEEeCCccCCc--eehhhhhhhhhhhhhhhhhhhc
Confidence 5699999998652 4455677888899988877665
|
|
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=98.27 E-value=2.4e-06 Score=79.88 Aligned_cols=79 Identities=19% Similarity=0.249 Sum_probs=55.6
Q ss_pred cCCCEEEEECC---------------CCc-HHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCC
Q 020854 51 KYGSWALVTGP---------------TDG-IGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114 (320)
Q Consensus 51 ~~gk~vlITGa---------------s~G-IG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~ 114 (320)
++||+++|||| ||| +|.++|++|+.+|++|++++++.... . ...+ ..+|++
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~----------~-~~~~--~~~~v~ 249 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL----------T-PPGV--KSIKVS 249 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC----------C-CCCc--EEEEec
Confidence 56999999999 677 99999999999999999988765421 0 1122 346666
Q ss_pred CCcHHHHHHHHH-HHcCCCeEEEEEccCCCCC
Q 020854 115 GDLDEGVERIKE-AIEGLDVGVLINNVGISYP 145 (320)
Q Consensus 115 ~~~~~~~~~~~~-~~~~~~id~lI~nAG~~~~ 145 (320)
+. ++..+.+.+ .++ ++|++|+|||+...
T Consensus 250 ~~-~~~~~~~~~~~~~--~~D~~i~~Aavsd~ 278 (390)
T TIGR00521 250 TA-EEMLEAALNELAK--DFDIFISAAAVADF 278 (390)
T ss_pred cH-HHHHHHHHHhhcc--cCCEEEEccccccc
Confidence 53 233355553 333 36699999999653
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=98.26 E-value=3.4e-05 Score=67.15 Aligned_cols=173 Identities=25% Similarity=0.265 Sum_probs=102.2
Q ss_pred EEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeEE
Q 020854 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGV 135 (320)
Q Consensus 56 vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 135 (320)
|+||||+|.+|+.+++.|.+.|++|.++.|+..+ +..++++.. + +..+..|..|. +.+.+.+.+.+ .
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~~--g--~~vv~~d~~~~-----~~l~~al~g~d--~ 67 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQAL--G--AEVVEADYDDP-----ESLVAALKGVD--A 67 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHHT--T--TEEEES-TT-H-----HHHHHHHTTCS--E
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhcc--c--ceEeecccCCH-----HHHHHHHcCCc--e
Confidence 6899999999999999999999999999999843 223444443 3 34568887765 56666677655 8
Q ss_pred EEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCC---CCCchhhHHHH
Q 020854 136 LINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS---DPLYSVYAATK 212 (320)
Q Consensus 136 lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~---~~~~~~Y~asK 212 (320)
|+++.+...+ .. . .....+++++.. .+-.++| .||........ .|. ..+-..|
T Consensus 68 v~~~~~~~~~--------~~--~--------~~~~~li~Aa~~----agVk~~v-~ss~~~~~~~~~~~~p~-~~~~~~k 123 (233)
T PF05368_consen 68 VFSVTPPSHP--------SE--L--------EQQKNLIDAAKA----AGVKHFV-PSSFGADYDESSGSEPE-IPHFDQK 123 (233)
T ss_dssp EEEESSCSCC--------CH--H--------HHHHHHHHHHHH----HT-SEEE-ESEESSGTTTTTTSTTH-HHHHHHH
T ss_pred EEeecCcchh--------hh--h--------hhhhhHHHhhhc----cccceEE-EEEeccccccccccccc-chhhhhh
Confidence 8888775421 11 1 112234455433 3445777 45554433111 111 2233456
Q ss_pred HHHHHHHHHHHHHHccCCceEEEEeccceecCCCc-------cc---------cCC---CCCC-CHHHHHHHHHHHhCCC
Q 020854 213 AYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS-------IK---------RSS---FFVP-STDVYARAAMRWIGYE 272 (320)
Q Consensus 213 aal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~-------~~---------~~~---~~~~-~~~~~a~~i~~~l~~~ 272 (320)
..++.+.+. .|+..+.|.||+....+.. .. .+. .... +.+++++.+...+..+
T Consensus 124 ~~ie~~l~~-------~~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p 196 (233)
T PF05368_consen 124 AEIEEYLRE-------SGIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDP 196 (233)
T ss_dssp HHHHHHHHH-------CTSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSG
T ss_pred hhhhhhhhh-------ccccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcCh
Confidence 666554433 3899999999976433211 00 011 1233 7899999988888664
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.25 E-value=3.9e-05 Score=72.51 Aligned_cols=133 Identities=18% Similarity=0.190 Sum_probs=88.3
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcC---CeEEEEeCCHH------HH-----HHHHHHHHhhcCC--ceEEEEEEeCC
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTG---LNLVLVGRNPD------KL-----KDVSDSIQAKYAK--TQIKSVVVDFS 114 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G---~~Vil~~r~~~------~~-----~~~~~~l~~~~~~--~~~~~~~~D~~ 114 (320)
.+||+++||||||.+|+-+.+.|++.- -++.+.-|.+. ++ +.+.+.+++..|+ .++..+..|++
T Consensus 10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~ 89 (467)
T KOG1221|consen 10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS 89 (467)
T ss_pred hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence 569999999999999999999998753 26777766421 11 2333444444433 57888999998
Q ss_pred CCcHHHH-HHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcC
Q 020854 115 GDLDEGV-ERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGS 193 (320)
Q Consensus 115 ~~~~~~~-~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS 193 (320)
++.-..- .+...-.. .+|++||.|+...- .|.++..+.+|.+|+..+.+.+..... -...+.+|.
T Consensus 90 ~~~LGis~~D~~~l~~--eV~ivih~AAtvrF---------de~l~~al~iNt~Gt~~~l~lak~~~~---l~~~vhVST 155 (467)
T KOG1221|consen 90 EPDLGISESDLRTLAD--EVNIVIHSAATVRF---------DEPLDVALGINTRGTRNVLQLAKEMVK---LKALVHVST 155 (467)
T ss_pred CcccCCChHHHHHHHh--cCCEEEEeeeeecc---------chhhhhhhhhhhHhHHHHHHHHHHhhh---hheEEEeeh
Confidence 7421111 11112222 46699999997531 234677789999999999998876543 235777777
Q ss_pred cccc
Q 020854 194 GAAI 197 (320)
Q Consensus 194 ~~~~ 197 (320)
.-..
T Consensus 156 Ay~n 159 (467)
T KOG1221|consen 156 AYSN 159 (467)
T ss_pred hhee
Confidence 6554
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.23 E-value=5.2e-05 Score=70.54 Aligned_cols=200 Identities=19% Similarity=0.160 Sum_probs=117.0
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.+-.+|+|+||+|++|+-++++|.++|+.|..+.|+.++.+.... + .........+..|....+ +....+.+.+..
T Consensus 77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~--~~~d~~~~~v~~~~~~~~-d~~~~~~~~~~~ 152 (411)
T KOG1203|consen 77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-V--FFVDLGLQNVEADVVTAI-DILKKLVEAVPK 152 (411)
T ss_pred CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-c--cccccccceeeecccccc-chhhhhhhhccc
Confidence 456899999999999999999999999999999999988776544 1 111223333444444332 333344443332
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHH
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA 210 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~a 210 (320)
...+++-++|.-.. .. +..+++ .+.+.|..++++++. ..+-.|+|++||+.+... ..+.+. +..
T Consensus 153 -~~~~v~~~~ggrp~--~e-d~~~p~------~VD~~g~knlvdA~~----~aGvk~~vlv~si~~~~~-~~~~~~-~~~ 216 (411)
T KOG1203|consen 153 -GVVIVIKGAGGRPE--EE-DIVTPE------KVDYEGTKNLVDACK----KAGVKRVVLVGSIGGTKF-NQPPNI-LLL 216 (411)
T ss_pred -cceeEEecccCCCC--cc-cCCCcc------eecHHHHHHHHHHHH----HhCCceEEEEEeecCccc-CCCchh-hhh
Confidence 23366666665432 10 112222 345667777777763 345568999999888763 122222 221
Q ss_pred HHHHHHH-HHHHHHHHHccCCceEEEEeccceecCCCcc------ccC-----CC--CCCCHHHHHHHHHHHhCCC
Q 020854 211 TKAYIDQ-FSRSLYVEYRKSGIDVQCQVPLYVATKMASI------KRS-----SF--FVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 211 sKaal~~-~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~------~~~-----~~--~~~~~~~~a~~i~~~l~~~ 272 (320)
.+... .-+....++...|+.-..|.||....+.... ..+ .. ...+-.++|+..++++...
T Consensus 217 --~~~~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~vael~~~all~~ 290 (411)
T KOG1203|consen 217 --NGLVLKAKLKAEKFLQDSGLPYTIIRPGGLEQDTGGQREVVVDDEKELLTVDGGAYSISRLDVAELVAKALLNE 290 (411)
T ss_pred --hhhhhHHHHhHHHHHHhcCCCcEEEeccccccCCCCcceecccCccccccccccceeeehhhHHHHHHHHHhhh
Confidence 11111 1123344456789999999999876654331 000 00 1345567777777766433
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=98.12 E-value=1.8e-05 Score=63.13 Aligned_cols=78 Identities=22% Similarity=0.424 Sum_probs=58.2
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLN-LVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~-Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
+++|+.++|.|+ ||.|++++..|++.|++ |.++.|+.++++++++++. +..+..+..+- +.+..
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~----~~~~~~~~~~~----------~~~~~ 73 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFG----GVNIEAIPLED----------LEEAL 73 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHT----GCSEEEEEGGG----------HCHHH
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcC----ccccceeeHHH----------HHHHH
Confidence 577999999998 99999999999999986 9999999999998888772 33344444321 22333
Q ss_pred cCCCeEEEEEccCCCC
Q 020854 129 EGLDVGVLINNVGISY 144 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~ 144 (320)
.. .|++|++.+...
T Consensus 74 ~~--~DivI~aT~~~~ 87 (135)
T PF01488_consen 74 QE--ADIVINATPSGM 87 (135)
T ss_dssp HT--ESEEEE-SSTTS
T ss_pred hh--CCeEEEecCCCC
Confidence 43 459998887643
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.09 E-value=0.00015 Score=64.35 Aligned_cols=134 Identities=21% Similarity=0.192 Sum_probs=88.6
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeE
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG 134 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 134 (320)
.++||||||.+|.+++++|.++|++|....|+.++..... ..+.....|+.+. +.+..-+.+.+
T Consensus 2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~---------~~v~~~~~d~~~~-----~~l~~a~~G~~-- 65 (275)
T COG0702 2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA---------GGVEVVLGDLRDP-----KSLVAGAKGVD-- 65 (275)
T ss_pred eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc---------CCcEEEEeccCCH-----hHHHHHhcccc--
Confidence 5899999999999999999999999999999998876543 3467777888776 44444445433
Q ss_pred EEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHHHHHH
Q 020854 135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAY 214 (320)
Q Consensus 135 ~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaa 214 (320)
.+++..+...+ ...+ ......+.....+..- .+..+++.+|+..+.. ...+.|..+|..
T Consensus 66 ~~~~i~~~~~~-~~~~-----------~~~~~~~~~~~a~~a~-----~~~~~~~~~s~~~~~~----~~~~~~~~~~~~ 124 (275)
T COG0702 66 GVLLISGLLDG-SDAF-----------RAVQVTAVVRAAEAAG-----AGVKHGVSLSVLGADA----ASPSALARAKAA 124 (275)
T ss_pred EEEEEeccccc-ccch-----------hHHHHHHHHHHHHHhc-----CCceEEEEeccCCCCC----CCccHHHHHHHH
Confidence 66666654321 1000 1122333344444432 2345677777766644 335779999999
Q ss_pred HHHHHHHHHHH
Q 020854 215 IDQFSRSLYVE 225 (320)
Q Consensus 215 l~~~~~~l~~e 225 (320)
.+...++....
T Consensus 125 ~e~~l~~sg~~ 135 (275)
T COG0702 125 VEAALRSSGIP 135 (275)
T ss_pred HHHHHHhcCCC
Confidence 98887765443
|
|
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=98.00 E-value=0.00021 Score=64.52 Aligned_cols=140 Identities=19% Similarity=0.210 Sum_probs=85.5
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++++|+|+++++|.++++.+.+.|++|+.++++.++.+... ++ +.. ..+|..+. +..+.+.+..+..
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~-----g~~---~~~~~~~~--~~~~~~~~~~~~~ 212 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QA-----GAD---AVFNYRAE--DLADRILAATAGQ 212 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc-----CCC---EEEeCCCc--CHHHHHHHHcCCC
Confidence 4899999999999999999999999999999999887755542 22 211 11343333 3445555544444
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccc--------c--CC
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV--------I--PS 201 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~--------~--~~ 201 (320)
.+|++++++|... .+.. ...+ +..|+++++++..... . ..
T Consensus 213 ~~d~vi~~~~~~~-------------~~~~---------------~~~l--~~~g~~v~~~~~~~~~~~~~~~~~~~~~~ 262 (325)
T cd08253 213 GVDVIIEVLANVN-------------LAKD---------------LDVL--APGGRIVVYGSGGLRGTIPINPLMAKEAS 262 (325)
T ss_pred ceEEEEECCchHH-------------HHHH---------------HHhh--CCCCEEEEEeecCCcCCCChhHHHhcCce
Confidence 6889999886310 0111 1122 3468999887632100 0 01
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHccCCce
Q 020854 202 DPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232 (320)
Q Consensus 202 ~~~~~~Y~asKaal~~~~~~l~~el~~~gi~ 232 (320)
..+...|..+|.....+.+.+...+....++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 293 (325)
T cd08253 263 IRGVLLYTATPEERAAAAEAIAAGLADGALR 293 (325)
T ss_pred EEeeehhhcCHHHHHHHHHHHHHHHHCCCcc
Confidence 1222356677777777777776665444443
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.99 E-value=3.7e-05 Score=71.35 Aligned_cols=78 Identities=22% Similarity=0.355 Sum_probs=61.7
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcC-CeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G-~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
+.+||.|| |++|+.+|..|+++| .+|++.+|+.++..+..+.. ..++...++|+.|. +.+.+-+.+.
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~-----~~~v~~~~vD~~d~-----~al~~li~~~- 69 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI-----GGKVEALQVDAADV-----DALVALIKDF- 69 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc-----cccceeEEecccCh-----HHHHHHHhcC-
Confidence 56889999 999999999999999 79999999999888776554 33789999999886 3444444443
Q ss_pred eEEEEEccCCCC
Q 020854 133 VGVLINNVGISY 144 (320)
Q Consensus 133 id~lI~nAG~~~ 144 (320)
|+|||.+....
T Consensus 70 -d~VIn~~p~~~ 80 (389)
T COG1748 70 -DLVINAAPPFV 80 (389)
T ss_pred -CEEEEeCCchh
Confidence 48998887543
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00032 Score=61.58 Aligned_cols=187 Identities=16% Similarity=0.106 Sum_probs=116.7
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
..|-++-|.||||.+|+-++.+|++.|-+||+-.|..+.-- .+++-.+.-..+.++..|+.|+ +.+.++. ..
T Consensus 59 ~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~---r~lkvmGdLGQvl~~~fd~~De--dSIr~vv---k~ 130 (391)
T KOG2865|consen 59 VSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDP---RHLKVMGDLGQVLFMKFDLRDE--DSIRAVV---KH 130 (391)
T ss_pred ccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccch---hheeecccccceeeeccCCCCH--HHHHHHH---Hh
Confidence 55889999999999999999999999999999888543211 1121112234688999999987 5544444 44
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHH
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA 210 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~a 210 (320)
.+ +|||-.|.-.+. ...+- -++|..++-.+++.+-. .+--++|.+|+..+.. ..-+-|--
T Consensus 131 sN--VVINLIGrd~eT----knf~f------~Dvn~~~aerlAricke----~GVerfIhvS~Lganv----~s~Sr~Lr 190 (391)
T KOG2865|consen 131 SN--VVINLIGRDYET----KNFSF------EDVNVHIAERLARICKE----AGVERFIHVSCLGANV----KSPSRMLR 190 (391)
T ss_pred Cc--EEEEeecccccc----CCccc------ccccchHHHHHHHHHHh----hChhheeehhhccccc----cChHHHHH
Confidence 45 899999864431 12222 25677787777777644 3445799999987654 33455777
Q ss_pred HHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc-------------------c-ccCCCCCCCHHHHHHHHHHHhC
Q 020854 211 TKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS-------------------I-KRSSFFVPSTDVYARAAMRWIG 270 (320)
Q Consensus 211 sKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~-------------------~-~~~~~~~~~~~~~a~~i~~~l~ 270 (320)
||++-+--++ .++ .....|.|.-+-...-+ . .+.-....-.-++|+.|+++++
T Consensus 191 sK~~gE~aVr---daf----PeAtIirPa~iyG~eDrfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvk 263 (391)
T KOG2865|consen 191 SKAAGEEAVR---DAF----PEATIIRPADIYGTEDRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVK 263 (391)
T ss_pred hhhhhHHHHH---hhC----CcceeechhhhcccchhHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhcc
Confidence 7776654433 222 12344556544322211 0 0000112234589999999998
Q ss_pred CC
Q 020854 271 YE 272 (320)
Q Consensus 271 ~~ 272 (320)
.+
T Consensus 264 Dp 265 (391)
T KOG2865|consen 264 DP 265 (391)
T ss_pred Cc
Confidence 76
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.84 E-value=8.3e-05 Score=68.11 Aligned_cols=74 Identities=19% Similarity=0.305 Sum_probs=54.4
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHc-C-CeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKT-G-LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~-G-~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 127 (320)
++.||+|+||||+|.||..++++|+++ | .++++++|+.+++.+..+++.. .|+ ..+.+.
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~-----------~~i--------~~l~~~ 212 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG-----------GKI--------LSLEEA 212 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc-----------ccH--------HhHHHH
Confidence 467999999999999999999999864 5 4899999998888776655421 111 123344
Q ss_pred HcCCCeEEEEEccCCCC
Q 020854 128 IEGLDVGVLINNVGISY 144 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~ 144 (320)
+.. .|++|+.++...
T Consensus 213 l~~--aDiVv~~ts~~~ 227 (340)
T PRK14982 213 LPE--ADIVVWVASMPK 227 (340)
T ss_pred Hcc--CCEEEECCcCCc
Confidence 554 449999998643
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00019 Score=65.49 Aligned_cols=150 Identities=19% Similarity=0.237 Sum_probs=91.6
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.+.|.|||++|.+|..++..|+.++. +++++|.++ .+..+.++....+ ... ..++++. +++.+.+..
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~~--~~~--i~~~~~~-----~d~~~~l~~ 86 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHINT--PAQ--VRGFLGD-----DQLGDALKG 86 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCCc--Cce--EEEEeCC-----CCHHHHcCC
Confidence 47899999999999999999997764 799999987 2222223332211 111 1232222 123344454
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccc-----c------c
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAI-----V------I 199 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~-----~------~ 199 (320)
.|++|+.||.... + ..+ ..+.+..|+-....+.+.+ .+.....|++++|--.. . .
T Consensus 87 --aDiVVitAG~~~~---~--g~~---R~dll~~N~~i~~~i~~~i----~~~~p~aivivvSNPvD~~~~i~t~~~~~~ 152 (323)
T PLN00106 87 --ADLVIIPAGVPRK---P--GMT---RDDLFNINAGIVKTLCEAV----AKHCPNALVNIISNPVNSTVPIAAEVLKKA 152 (323)
T ss_pred --CCEEEEeCCCCCC---C--CCC---HHHHHHHHHHHHHHHHHHH----HHHCCCeEEEEeCCCccccHHHHHHHHHHc
Confidence 4599999997542 1 223 4566777877766555554 44444455555553332 1 1
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHHHHHc
Q 020854 200 PSDPLYSVYAATKAYIDQFSRSLYVEYR 227 (320)
Q Consensus 200 ~~~~~~~~Y~asKaal~~~~~~l~~el~ 227 (320)
.+.|....|+.++.-...|-..++.++.
T Consensus 153 s~~p~~~viG~~~LDs~Rl~~~lA~~lg 180 (323)
T PLN00106 153 GVYDPKKLFGVTTLDVVRANTFVAEKKG 180 (323)
T ss_pred CCCCcceEEEEecchHHHHHHHHHHHhC
Confidence 2345566788887666678888888874
|
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.81 E-value=6.3e-05 Score=65.37 Aligned_cols=83 Identities=17% Similarity=0.165 Sum_probs=53.4
Q ss_pred cCCCEEEEECCC----------------CcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCC
Q 020854 51 KYGSWALVTGPT----------------DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114 (320)
Q Consensus 51 ~~gk~vlITGas----------------~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~ 114 (320)
+.||.|+||+|. |-+|.++|++|.++|++|+++++....... .. ........+..
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~---~~~~~~~~V~s--- 71 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DI---NNQLELHPFEG--- 71 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---cc---CCceeEEEEec---
Confidence 469999999885 999999999999999999988764221110 00 00112222222
Q ss_pred CCcHHHHHHHHHHHcCCCeEEEEEccCCCC
Q 020854 115 GDLDEGVERIKEAIEGLDVGVLINNVGISY 144 (320)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~id~lI~nAG~~~ 144 (320)
..+..+.+.+.+...++|++||.|+...
T Consensus 72 --~~d~~~~l~~~~~~~~~D~VIH~AAvsD 99 (229)
T PRK09620 72 --IIDLQDKMKSIITHEKVDAVIMAAAGSD 99 (229)
T ss_pred --HHHHHHHHHHHhcccCCCEEEECccccc
Confidence 1133345555565446779999999854
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.80 E-value=9.3e-05 Score=71.03 Aligned_cols=77 Identities=23% Similarity=0.372 Sum_probs=55.8
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH-HHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP-DKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
++++|+++|+|+++ +|.++|+.|+++|++|++++++. +.+++..+++.+. .+..+..|..+. ..
T Consensus 2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~----------~~ 66 (450)
T PRK14106 2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGEL----GIELVLGEYPEE----------FL 66 (450)
T ss_pred CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc----CCEEEeCCcchh----------Hh
Confidence 35699999999888 99999999999999999999985 4455555555432 244555555531 12
Q ss_pred cCCCeEEEEEccCCC
Q 020854 129 EGLDVGVLINNVGIS 143 (320)
Q Consensus 129 ~~~~id~lI~nAG~~ 143 (320)
+ ++|+||+++|..
T Consensus 67 ~--~~d~vv~~~g~~ 79 (450)
T PRK14106 67 E--GVDLVVVSPGVP 79 (450)
T ss_pred h--cCCEEEECCCCC
Confidence 3 356999999874
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00011 Score=69.09 Aligned_cols=76 Identities=30% Similarity=0.517 Sum_probs=56.3
Q ss_pred EEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCe
Q 020854 56 ALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV 133 (320)
Q Consensus 56 vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 133 (320)
|+|.|| |.+|+.+++.|++++- +|++.+|+.+++++..+++ ...++...++|+.|. +++.+-+.+.|
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~----~~~~~~~~~~d~~~~-----~~l~~~~~~~d- 69 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL----LGDRVEAVQVDVNDP-----ESLAELLRGCD- 69 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT------TTTTEEEEE--TTTH-----HHHHHHHTTSS-
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc----cccceeEEEEecCCH-----HHHHHHHhcCC-
Confidence 689999 9999999999999874 8999999999988887665 256899999999876 34555555555
Q ss_pred EEEEEccCCC
Q 020854 134 GVLINNVGIS 143 (320)
Q Consensus 134 d~lI~nAG~~ 143 (320)
+|||++|..
T Consensus 70 -vVin~~gp~ 78 (386)
T PF03435_consen 70 -VVINCAGPF 78 (386)
T ss_dssp -EEEE-SSGG
T ss_pred -EEEECCccc
Confidence 999999854
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00016 Score=61.60 Aligned_cols=162 Identities=15% Similarity=0.218 Sum_probs=101.4
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHc-CC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKT-GL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~-G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
.+...|+||||-|-+|..+|+-|-.+ |- +||+.+..+....- .+. --++-.|+.|. +.+.+..
T Consensus 42 ~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V-----~~~-----GPyIy~DILD~-----K~L~eIV 106 (366)
T KOG2774|consen 42 QKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANV-----TDV-----GPYIYLDILDQ-----KSLEEIV 106 (366)
T ss_pred CCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhh-----ccc-----CCchhhhhhcc-----ccHHHhh
Confidence 34578999999999999999998754 64 67776654432111 111 11344555554 3333433
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCC----
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL---- 204 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~---- 204 (320)
-..+||.+||-.+..+. + .+...-...++|..|..++++.+..+ .-=+++-|.-|-++|..|.
T Consensus 107 Vn~RIdWL~HfSALLSA----v---GE~NVpLA~~VNI~GvHNil~vAa~~------kL~iFVPSTIGAFGPtSPRNPTP 173 (366)
T KOG2774|consen 107 VNKRIDWLVHFSALLSA----V---GETNVPLALQVNIRGVHNILQVAAKH------KLKVFVPSTIGAFGPTSPRNPTP 173 (366)
T ss_pred cccccceeeeHHHHHHH----h---cccCCceeeeecchhhhHHHHHHHHc------CeeEeecccccccCCCCCCCCCC
Confidence 34468899987765432 1 11122334579999999999887543 2335555555544332322
Q ss_pred -------chhhHHHHHHHHHHHHHHHHHHccCCceEEEEe-ccceec
Q 020854 205 -------YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQV-PLYVAT 243 (320)
Q Consensus 205 -------~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~-PG~v~T 243 (320)
...|+.||.-.+.+.+.+...+ |+++.|+. ||.+..
T Consensus 174 dltIQRPRTIYGVSKVHAEL~GEy~~hrF---g~dfr~~rfPg~is~ 217 (366)
T KOG2774|consen 174 DLTIQRPRTIYGVSKVHAELLGEYFNHRF---GVDFRSMRFPGIISA 217 (366)
T ss_pred CeeeecCceeechhHHHHHHHHHHHHhhc---CccceecccCccccc
Confidence 4679999999999988887764 67777665 776644
|
|
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.0012 Score=60.29 Aligned_cols=79 Identities=23% Similarity=0.380 Sum_probs=57.0
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++++|+|+++++|.++++.+...|++|++++++.++.+.. ..+ +.. ..+|..+. +..+.+.+.....
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~-----~~~---~~~~~~~~--~~~~~~~~~~~~~ 234 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KEL-----GAD---YVIDYRKE--DFVREVRELTGKR 234 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCC---eEEecCCh--HHHHHHHHHhCCC
Confidence 478999999999999999999999999999999998776543 211 111 12344433 4445565555544
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
++|++++++|
T Consensus 235 ~~d~~i~~~g 244 (342)
T cd08266 235 GVDVVVEHVG 244 (342)
T ss_pred CCcEEEECCc
Confidence 6789999987
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00039 Score=62.43 Aligned_cols=48 Identities=17% Similarity=0.378 Sum_probs=43.0
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcC-CeEEEEeCCHHHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQ 98 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G-~~Vil~~r~~~~~~~~~~~l~ 98 (320)
.+++|.++|+|+ ||+|++++..|++.| .+|++++|+.++.+++.+++.
T Consensus 120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~ 168 (278)
T PRK00258 120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG 168 (278)
T ss_pred CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence 466899999997 999999999999999 689999999999888877764
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00038 Score=63.53 Aligned_cols=118 Identities=19% Similarity=0.206 Sum_probs=72.6
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G--~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
+.+.+.|||++|.+|..++..|+.++ .+++++|++. .+..+.++....+ .. ...+.+|. ....+.+.
T Consensus 7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~--~~g~a~Dl~~~~~--~~--~v~~~td~-----~~~~~~l~ 75 (321)
T PTZ00325 7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG--APGVAADLSHIDT--PA--KVTGYADG-----ELWEKALR 75 (321)
T ss_pred CCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC--CcccccchhhcCc--Cc--eEEEecCC-----CchHHHhC
Confidence 46789999999999999999999666 4799999932 2222334432211 11 22234332 11233445
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCc
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSG 194 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~ 194 (320)
+ .|+||+.+|.... + ..+ ..+.+..|+...-.+.+. |.+.+..++|.++|-
T Consensus 76 g--aDvVVitaG~~~~---~--~~t---R~dll~~N~~i~~~i~~~----i~~~~~~~iviv~SN 126 (321)
T PTZ00325 76 G--ADLVLICAGVPRK---P--GMT---RDDLFNTNAPIVRDLVAA----VASSAPKAIVGIVSN 126 (321)
T ss_pred C--CCEEEECCCCCCC---C--CCC---HHHHHHHHHHHHHHHHHH----HHHHCCCeEEEEecC
Confidence 4 4499999997432 1 122 455677787766666655 555566678877774
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00061 Score=57.93 Aligned_cols=148 Identities=20% Similarity=0.219 Sum_probs=88.0
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCC---eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGL---NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~---~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
+.++|||++|=.|.|+.+.+.++|. +.++.+.. ++|+++. .+..+-+.+
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk-----------------------d~DLt~~-----a~t~~lF~~ 53 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK-----------------------DADLTNL-----ADTRALFES 53 (315)
T ss_pred ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc-----------------------cccccch-----HHHHHHHhc
Confidence 6799999999999999999999876 34443322 3555554 333344444
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccc-------------
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAI------------- 197 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~------------- 197 (320)
.++..||+.|+..+. .+...+- -.+.+..|+.-.-++++.+...-.+ .+|...|..-+
T Consensus 54 ekPthVIhlAAmVGG---lf~N~~y--nldF~r~Nl~indNVlhsa~e~gv~----K~vsclStCIfPdkt~yPIdEtmv 124 (315)
T KOG1431|consen 54 EKPTHVIHLAAMVGG---LFHNNTY--NLDFIRKNLQINDNVLHSAHEHGVK----KVVSCLSTCIFPDKTSYPIDETMV 124 (315)
T ss_pred cCCceeeehHhhhcc---hhhcCCC--chHHHhhcceechhHHHHHHHhchh----hhhhhcceeecCCCCCCCCCHHHh
Confidence 556789999877653 2222221 1233445554445555555443222 24444442211
Q ss_pred -ccCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccce
Q 020854 198 -VIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYV 241 (320)
Q Consensus 198 -~~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v 241 (320)
.+|+.|....|+-+|.-+.-..++.+.++. -...++.|-.+
T Consensus 125 h~gpphpsN~gYsyAKr~idv~n~aY~~qhg---~~~tsviPtNv 166 (315)
T KOG1431|consen 125 HNGPPHPSNFGYSYAKRMIDVQNQAYRQQHG---RDYTSVIPTNV 166 (315)
T ss_pred ccCCCCCCchHHHHHHHHHHHHHHHHHHHhC---Cceeeeccccc
Confidence 124566778899999888888888888863 34444444333
|
|
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00082 Score=58.45 Aligned_cols=149 Identities=19% Similarity=0.223 Sum_probs=93.6
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCH-------------------HHHHHHHHHHHhhcCCceEEEEE
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP-------------------DKLKDVSDSIQAKYAKTQIKSVV 110 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~ 110 (320)
+++.+|+|.|. ||+|.++++.|++.|. +++++|.+. .+.+...+.+.+.+|..++..+.
T Consensus 9 L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~ 87 (231)
T cd00755 9 LRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE 87 (231)
T ss_pred HhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee
Confidence 56788888875 7999999999999997 899988642 35566677888888888888877
Q ss_pred EeCCCCcHHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEE
Q 020854 111 VDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVN 190 (320)
Q Consensus 111 ~D~~~~~~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~ 190 (320)
..++.+ ....+ +. .++|++|.+..... .-..+.+.+.. . +-.+|.
T Consensus 88 ~~i~~~---~~~~l---~~-~~~D~VvdaiD~~~-----------------------~k~~L~~~c~~----~-~ip~I~ 132 (231)
T cd00755 88 EFLTPD---NSEDL---LG-GDPDFVVDAIDSIR-----------------------AKVALIAYCRK----R-KIPVIS 132 (231)
T ss_pred eecCHh---HHHHH---hc-CCCCEEEEcCCCHH-----------------------HHHHHHHHHHH----h-CCCEEE
Confidence 666532 11222 21 13568887654210 00112233221 1 234555
Q ss_pred EcCccccccCCCCCchhhHHHHHHHHHHHHHHHHHHccCCce--EEEEe
Q 020854 191 IGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID--VQCQV 237 (320)
Q Consensus 191 vsS~~~~~~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~--v~~v~ 237 (320)
..+..+...| .....=..+|.-..-+++.++.+|+..|+. +.+|+
T Consensus 133 s~g~g~~~dp--~~i~i~di~~t~~~pla~~~R~~Lrk~~~~~~~~~v~ 179 (231)
T cd00755 133 SMGAGGKLDP--TRIRVADISKTSGDPLARKVRKRLRKRGIFFGVPVVY 179 (231)
T ss_pred EeCCcCCCCC--CeEEEccEeccccCcHHHHHHHHHHHcCCCCCeEEEe
Confidence 5555554421 122334456666688999999999998885 66654
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00043 Score=61.82 Aligned_cols=48 Identities=21% Similarity=0.432 Sum_probs=42.9
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHh
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQA 99 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~ 99 (320)
.++|+++|+|+ ||+|++++..|++.|++|++++|+.++.++..+++..
T Consensus 115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~ 162 (270)
T TIGR00507 115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQR 162 (270)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhh
Confidence 45899999999 6999999999999999999999999998888877754
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00032 Score=57.37 Aligned_cols=161 Identities=17% Similarity=0.139 Sum_probs=104.4
Q ss_pred CcccccCCCEEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHH
Q 020854 46 AKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVER 123 (320)
Q Consensus 46 ~~~~~~~gk~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~ 123 (320)
+.|+.++++.++|.||||--|..+.+++++.+- +|+++.|.+.--.++ +..+....+|.+ -.++
T Consensus 11 rEDf~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at---------~k~v~q~~vDf~-----Kl~~ 76 (238)
T KOG4039|consen 11 REDFRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT---------DKVVAQVEVDFS-----KLSQ 76 (238)
T ss_pred HHHHhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc---------cceeeeEEechH-----HHHH
Confidence 457888899999999999999999999999883 899999875321111 334555555653 2355
Q ss_pred HHHHHcCCCeEEEEEccCCCCCccc--cccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCC
Q 020854 124 IKEAIEGLDVGVLINNVGISYPYAR--FFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS 201 (320)
Q Consensus 124 ~~~~~~~~~id~lI~nAG~~~~~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~ 201 (320)
....+.. +|+++++-|......+ -+-..+-+. .+.+++.+ ++.+..+++.+||..+.-
T Consensus 77 ~a~~~qg--~dV~FcaLgTTRgkaGadgfykvDhDy-----------vl~~A~~A----Ke~Gck~fvLvSS~GAd~--- 136 (238)
T KOG4039|consen 77 LATNEQG--PDVLFCALGTTRGKAGADGFYKVDHDY-----------VLQLAQAA----KEKGCKTFVLVSSAGADP--- 136 (238)
T ss_pred HHhhhcC--CceEEEeecccccccccCceEeechHH-----------HHHHHHHH----HhCCCeEEEEEeccCCCc---
Confidence 6666665 4599998887654222 111222211 12223332 345567899999987754
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 202 DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 202 ~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
.....|--.|.-++.=+..|.-+ ++....||.+.-+-..
T Consensus 137 -sSrFlY~k~KGEvE~~v~eL~F~------~~~i~RPG~ll~~R~e 175 (238)
T KOG4039|consen 137 -SSRFLYMKMKGEVERDVIELDFK------HIIILRPGPLLGERTE 175 (238)
T ss_pred -ccceeeeeccchhhhhhhhcccc------EEEEecCcceeccccc
Confidence 23566888888777666555433 6778889998655443
|
|
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00012 Score=70.25 Aligned_cols=48 Identities=21% Similarity=0.151 Sum_probs=38.9
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHh
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQA 99 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~ 99 (320)
+.||+++|||+++ +|.+.|+.|++.|++|++.+++........+++.+
T Consensus 3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~ 50 (447)
T PRK02472 3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLE 50 (447)
T ss_pred cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHh
Confidence 5689999999986 99999999999999999999876544444455544
|
|
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0019 Score=57.37 Aligned_cols=145 Identities=17% Similarity=0.207 Sum_probs=89.2
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCH-------------------HHHHHHHHHHHhhcCCceEEEE
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP-------------------DKLKDVSDSIQAKYAKTQIKSV 109 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~ 109 (320)
++++..|+|.|+ ||+|.++|+.|+..|. +++++|.+. .+.+.+.+.+.+.+|..++..+
T Consensus 27 kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i 105 (268)
T PRK15116 27 LFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVV 105 (268)
T ss_pred HhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEE
Confidence 467888888865 6999999999999994 899988641 2445666777777777777766
Q ss_pred EEeCCCCcHHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEE
Q 020854 110 VVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIV 189 (320)
Q Consensus 110 ~~D~~~~~~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv 189 (320)
+--++. +..+++ +. .++|+||.+.+... .-..+.+.+. + .+-.+|
T Consensus 106 ~~~i~~---e~~~~l---l~-~~~D~VIdaiD~~~-----------------------~k~~L~~~c~----~-~~ip~I 150 (268)
T PRK15116 106 DDFITP---DNVAEY---MS-AGFSYVIDAIDSVR-----------------------PKAALIAYCR----R-NKIPLV 150 (268)
T ss_pred ecccCh---hhHHHH---hc-CCCCEEEEcCCCHH-----------------------HHHHHHHHHH----H-cCCCEE
Confidence 432221 122222 22 13568887765311 0011222221 1 223466
Q ss_pred EEcCccccccCCCCCchhhHHHHHHHHHHHHHHHHHHcc-CCce
Q 020854 190 NIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK-SGID 232 (320)
Q Consensus 190 ~vsS~~~~~~~~~~~~~~Y~asKaal~~~~~~l~~el~~-~gi~ 232 (320)
.+++..+...| .....=..+|...+.|++.++++|+. +||+
T Consensus 151 ~~gGag~k~dp--~~~~~~di~~t~~~pla~~~R~~lr~~~~~~ 192 (268)
T PRK15116 151 TTGGAGGQIDP--TQIQVVDLAKTIQDPLAAKLRERLKSDFGVV 192 (268)
T ss_pred EECCcccCCCC--CeEEEEeeecccCChHHHHHHHHHHHhhCCC
Confidence 66666665522 22334456677778999999999997 6775
|
|
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00046 Score=57.92 Aligned_cols=78 Identities=23% Similarity=0.340 Sum_probs=50.7
Q ss_pred cCCCEEEEECC----------------CCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCC
Q 020854 51 KYGSWALVTGP----------------TDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114 (320)
Q Consensus 51 ~~gk~vlITGa----------------s~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~ 114 (320)
|+||.||||+| ||-.|.++|+++..+|++|+++..... +.. ...+..+.++-
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~----------p~~~~~i~v~s- 68 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP----------PPGVKVIRVES- 68 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS---------------TTEEEEE-SS-
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc----------cccceEEEecc-
Confidence 46899999985 678999999999999999999887742 111 22455555443
Q ss_pred CCcHHHHHHHHHHHcCCCeEEEEEccCCCC
Q 020854 115 GDLDEGVERIKEAIEGLDVGVLINNVGISY 144 (320)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~id~lI~nAG~~~ 144 (320)
.++..+.+.+.++..| ++|++|++..
T Consensus 69 --a~em~~~~~~~~~~~D--i~I~aAAVsD 94 (185)
T PF04127_consen 69 --AEEMLEAVKELLPSAD--IIIMAAAVSD 94 (185)
T ss_dssp --HHHHHHHHHHHGGGGS--EEEE-SB--S
T ss_pred --hhhhhhhhccccCcce--eEEEecchhh
Confidence 3467777777777665 9999999865
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00068 Score=61.31 Aligned_cols=82 Identities=22% Similarity=0.379 Sum_probs=65.9
Q ss_pred EEEECCCCcHHHHHHHHHHH----cCCeEEEEeCCHHHHHHHHHHHHhhcCC--ceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 56 ALVTGPTDGIGKSFAFQLAK----TGLNLVLVGRNPDKLKDVSDSIQAKYAK--TQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 56 vlITGas~GIG~ala~~l~~----~G~~Vil~~r~~~~~~~~~~~l~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
++|-||||--|.-+++++.. .|..+.+.+||++++++..+.+.+..+. .....+.+|.+|+ +.++++.+.
T Consensus 8 vVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~--~Sl~emak~-- 83 (423)
T KOG2733|consen 8 VVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANE--ASLDEMAKQ-- 83 (423)
T ss_pred EEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCH--HHHHHHHhh--
Confidence 89999999999999999998 7889999999999999999888765432 2223788999887 666666553
Q ss_pred CCCeEEEEEccCCCC
Q 020854 130 GLDVGVLINNVGISY 144 (320)
Q Consensus 130 ~~~id~lI~nAG~~~ 144 (320)
.+ +|||++|...
T Consensus 84 -~~--vivN~vGPyR 95 (423)
T KOG2733|consen 84 -AR--VIVNCVGPYR 95 (423)
T ss_pred -hE--EEEeccccce
Confidence 34 8999999755
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0016 Score=59.74 Aligned_cols=115 Identities=23% Similarity=0.239 Sum_probs=65.0
Q ss_pred EEEEECCCCcHHHHHHHHHHHcC-------CeEEEEeCCHH--HHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHH
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTG-------LNLVLVGRNPD--KLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIK 125 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G-------~~Vil~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 125 (320)
.++||||+|.+|..++..|+..+ .+|++.+++.. +++....++.... ..+..|+... ....
T Consensus 4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~-----~~~~~~~~~~-----~~~~ 73 (325)
T cd01336 4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCA-----FPLLKSVVAT-----TDPE 73 (325)
T ss_pred EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhcc-----ccccCCceec-----CCHH
Confidence 48999999999999999999854 48999999653 2222111111100 0000111111 2233
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC--CCcEEEEEcC
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR--KKGAIVNIGS 193 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~--~~g~Iv~vsS 193 (320)
+.+.+ .|+||+.||.... + ..+. .+.++.|+. +++...+.+.+. +++.++++|.
T Consensus 74 ~~l~~--aDiVI~tAG~~~~---~--~~~R---~~l~~~N~~----i~~~i~~~i~~~~~~~~iiivvsN 129 (325)
T cd01336 74 EAFKD--VDVAILVGAMPRK---E--GMER---KDLLKANVK----IFKEQGEALDKYAKKNVKVLVVGN 129 (325)
T ss_pred HHhCC--CCEEEEeCCcCCC---C--CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCCeEEEEecC
Confidence 44444 5599999997542 1 2233 344556654 445555545544 3667777775
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.01 Score=47.55 Aligned_cols=114 Identities=16% Similarity=0.286 Sum_probs=71.2
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhhcCCc--eEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAKT--QIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|.|+|++|.+|..+|..|...+. +++++|+++++++..+.++....... ...... +..+ .+.
T Consensus 2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~-~~~~-----------~~~- 68 (141)
T PF00056_consen 2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS-GDYE-----------ALK- 68 (141)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE-SSGG-----------GGT-
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc-cccc-----------ccc-
Confidence 588999999999999999999874 79999999998888777775432222 222222 2111 122
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcC
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGS 193 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS 193 (320)
+-|++|..||.... + ..+. .+.++.|..-.-.+.+.+..+ .+++.++.+|.
T Consensus 69 -~aDivvitag~~~~---~--g~sR---~~ll~~N~~i~~~~~~~i~~~---~p~~~vivvtN 119 (141)
T PF00056_consen 69 -DADIVVITAGVPRK---P--GMSR---LDLLEANAKIVKEIAKKIAKY---APDAIVIVVTN 119 (141)
T ss_dssp -TESEEEETTSTSSS---T--TSSH---HHHHHHHHHHHHHHHHHHHHH---STTSEEEE-SS
T ss_pred -cccEEEEecccccc---c--cccH---HHHHHHhHhHHHHHHHHHHHh---CCccEEEEeCC
Confidence 45699999997532 1 2233 344566655444444444332 34677777654
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0012 Score=53.50 Aligned_cols=48 Identities=27% Similarity=0.494 Sum_probs=41.4
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcC-CeEEEEeCCHHHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQ 98 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G-~~Vil~~r~~~~~~~~~~~l~ 98 (320)
++++++++|+|+ |++|.++++.|.+.| .+|++++|+.++.++..+++.
T Consensus 16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~ 64 (155)
T cd01065 16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFG 64 (155)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHh
Confidence 355889999998 899999999999996 789999999988887777664
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0015 Score=60.22 Aligned_cols=83 Identities=19% Similarity=0.347 Sum_probs=62.0
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCH---------------------HHHHHHHHHHHhhcCCceE
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP---------------------DKLKDVSDSIQAKYAKTQI 106 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~---------------------~~~~~~~~~l~~~~~~~~~ 106 (320)
-++++++|+|.|+ ||+|..+|+.|+..|. +++++|++. .+.+.+++.+++.+++..+
T Consensus 20 ~~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i 98 (338)
T PRK12475 20 RKIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEI 98 (338)
T ss_pred HhhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEE
Confidence 3577899999997 7899999999999997 899999874 3566677888888888888
Q ss_pred EEEEEeCCCCcHHHHHHHHHHHcCCCeEEEEEcc
Q 020854 107 KSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNV 140 (320)
Q Consensus 107 ~~~~~D~~~~~~~~~~~~~~~~~~~~id~lI~nA 140 (320)
..+..|++.+ .+++ .+.. .|++|.+.
T Consensus 99 ~~~~~~~~~~---~~~~---~~~~--~DlVid~~ 124 (338)
T PRK12475 99 VPVVTDVTVE---ELEE---LVKE--VDLIIDAT 124 (338)
T ss_pred EEEeccCCHH---HHHH---HhcC--CCEEEEcC
Confidence 8887777532 2222 2343 44777654
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0016 Score=59.88 Aligned_cols=79 Identities=27% Similarity=0.430 Sum_probs=57.0
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
|++|||+||+||+|...++-..+.|++++++..+.++.+ ...++ +... .+|..++ +..+++.+..++..
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~l---GAd~-----vi~y~~~--~~~~~v~~~t~g~g 211 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKEL---GADH-----VINYREE--DFVEQVRELTGGKG 211 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhc---CCCE-----EEcCCcc--cHHHHHHHHcCCCC
Confidence 999999999999999999999899988777777776655 33333 2221 1223333 46777777777666
Q ss_pred eEEEEEccCC
Q 020854 133 VGVLINNVGI 142 (320)
Q Consensus 133 id~lI~nAG~ 142 (320)
+|+++...|.
T Consensus 212 vDvv~D~vG~ 221 (326)
T COG0604 212 VDVVLDTVGG 221 (326)
T ss_pred ceEEEECCCH
Confidence 8899988873
|
|
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0017 Score=58.42 Aligned_cols=50 Identities=20% Similarity=0.404 Sum_probs=44.4
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhc
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKY 101 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~ 101 (320)
+.++.|+|.|+ ||.|++++..|++.|+ +|++++|+.++.+++++++....
T Consensus 125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~ 175 (284)
T PRK12549 125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARF 175 (284)
T ss_pred ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhC
Confidence 55889999997 7899999999999998 79999999999999988886654
|
|
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0022 Score=57.77 Aligned_cols=79 Identities=23% Similarity=0.423 Sum_probs=56.2
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++++|+|+++++|.++++.+...|++|++++++.++.+.. +++ +.. ..++..+. +..+.+.+.....
T Consensus 139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~--~~~~~~~~~~~~~ 207 (323)
T cd05276 139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL-----GAD---VAINYRTE--DFAEEVKEATGGR 207 (323)
T ss_pred CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc-----CCC---EEEeCCch--hHHHHHHHHhCCC
Confidence 478999999999999999999999999999999988766544 222 211 12333222 4445555544444
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
.+|++++++|
T Consensus 208 ~~d~vi~~~g 217 (323)
T cd05276 208 GVDVILDMVG 217 (323)
T ss_pred CeEEEEECCc
Confidence 6889999988
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.00059 Score=66.70 Aligned_cols=48 Identities=25% Similarity=0.495 Sum_probs=42.5
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI 97 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l 97 (320)
..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++
T Consensus 375 ~~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l 422 (529)
T PLN02520 375 SPLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV 422 (529)
T ss_pred cCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence 3467999999999 69999999999999999999999998888776655
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0021 Score=54.80 Aligned_cols=83 Identities=19% Similarity=0.397 Sum_probs=61.0
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCC-------------------HHHHHHHHHHHHhhcCCceEEEE
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRN-------------------PDKLKDVSDSIQAKYAKTQIKSV 109 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~ 109 (320)
++++++|+|.| .||+|.++++.|+..|. +++++|.+ ..+.+..++.+++.++..++..+
T Consensus 18 kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~ 96 (202)
T TIGR02356 18 RLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTAL 96 (202)
T ss_pred HhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence 46789999998 68999999999999997 89999987 34566777888888877777776
Q ss_pred EEeCCCCcHHHHHHHHHHHcCCCeEEEEEccC
Q 020854 110 VVDFSGDLDEGVERIKEAIEGLDVGVLINNVG 141 (320)
Q Consensus 110 ~~D~~~~~~~~~~~~~~~~~~~~id~lI~nAG 141 (320)
..++.++ .+.+.+...| ++|.+..
T Consensus 97 ~~~i~~~------~~~~~~~~~D--~Vi~~~d 120 (202)
T TIGR02356 97 KERVTAE------NLELLINNVD--LVLDCTD 120 (202)
T ss_pred hhcCCHH------HHHHHHhCCC--EEEECCC
Confidence 6555431 2333444444 8887653
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0032 Score=57.90 Aligned_cols=78 Identities=19% Similarity=0.255 Sum_probs=53.1
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
|++++|+||+||+|.+.++.....|+ +|+.+++++++.+.+.+++ +... . .|..+. +..+.+.+..+ .
T Consensus 155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l-----Ga~~-v--i~~~~~--~~~~~i~~~~~-~ 223 (345)
T cd08293 155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL-----GFDA-A--INYKTD--NVAERLRELCP-E 223 (345)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc-----CCcE-E--EECCCC--CHHHHHHHHCC-C
Confidence 48999999999999999888778898 7999999888766554433 2211 1 233322 33344444333 3
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
.+|+++.++|
T Consensus 224 gvd~vid~~g 233 (345)
T cd08293 224 GVDVYFDNVG 233 (345)
T ss_pred CceEEEECCC
Confidence 5789998877
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0037 Score=57.63 Aligned_cols=83 Identities=17% Similarity=0.382 Sum_probs=60.1
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCH---------------------HHHHHHHHHHHhhcCCceE
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP---------------------DKLKDVSDSIQAKYAKTQI 106 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~---------------------~~~~~~~~~l~~~~~~~~~ 106 (320)
-+++++.|+|.|+ ||+|..+++.|+..|. +++++|.+. .+.+...+.+++.++...+
T Consensus 20 ~~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v 98 (339)
T PRK07688 20 QKLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRV 98 (339)
T ss_pred HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEE
Confidence 3577899999998 8999999999999998 899999863 3455566777777777777
Q ss_pred EEEEEeCCCCcHHHHHHHHHHHcCCCeEEEEEcc
Q 020854 107 KSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNV 140 (320)
Q Consensus 107 ~~~~~D~~~~~~~~~~~~~~~~~~~~id~lI~nA 140 (320)
..+..++++. . +.+.+... |++|.+.
T Consensus 99 ~~~~~~~~~~---~---~~~~~~~~--DlVid~~ 124 (339)
T PRK07688 99 EAIVQDVTAE---E---LEELVTGV--DLIIDAT 124 (339)
T ss_pred EEEeccCCHH---H---HHHHHcCC--CEEEEcC
Confidence 7777776532 2 22223433 4777664
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.00054 Score=58.95 Aligned_cols=207 Identities=17% Similarity=0.096 Sum_probs=119.2
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHH-HHHHH----HhhcCCceEEEEEEeCCCCcHHHHHHHHHH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD-VSDSI----QAKYAKTQIKSVVVDFSGDLDEGVERIKEA 127 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~-~~~~l----~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 127 (320)
.|++||||=+|-=|.-+|+-|+.+|++|..+-|.....+. ..+.+ ...+ +......-.|++|+ ...-++
T Consensus 28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~-~~~mkLHYgDmTDs--s~L~k~--- 101 (376)
T KOG1372|consen 28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHN-GASMKLHYGDMTDS--SCLIKL--- 101 (376)
T ss_pred ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcc-cceeEEeeccccch--HHHHHH---
Confidence 4799999999999999999999999999987775544322 12222 1111 34556666788887 444444
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccc---------
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV--------- 198 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~--------- 198 (320)
+..+.++-+-|-|+...- + .+-+--+-+-++...|++.+..+.-..-... +-++---|+..-+.
T Consensus 102 I~~ikPtEiYnLaAQSHV--k----vSFdlpeYTAeVdavGtLRlLdAi~~c~l~~-~VrfYQAstSElyGkv~e~PQsE 174 (376)
T KOG1372|consen 102 ISTIKPTEVYNLAAQSHV--K----VSFDLPEYTAEVDAVGTLRLLDAIRACRLTE-KVRFYQASTSELYGKVQEIPQSE 174 (376)
T ss_pred HhccCchhhhhhhhhcce--E----EEeecccceeeccchhhhhHHHHHHhcCccc-ceeEEecccHhhcccccCCCccc
Confidence 444445566666665442 1 1111113334567788888887765433222 23333322211111
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHHHHH---ccCCceEEEEeccceec----CCCc---------------c-ccCCCCC
Q 020854 199 IPSDPLYSVYAATKAYIDQFSRSLYVEY---RKSGIDVQCQVPLYVAT----KMAS---------------I-KRSSFFV 255 (320)
Q Consensus 199 ~~~~~~~~~Y~asKaal~~~~~~l~~el---~~~gi~v~~v~PG~v~T----~~~~---------------~-~~~~~~~ 255 (320)
..|+...++|+++|.+-..++-..+..+ +-.||-+|.=+|--=++ .+.+ . .....-|
T Consensus 175 ~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDW 254 (376)
T KOG1372|consen 175 TTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDW 254 (376)
T ss_pred CCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhccc
Confidence 0134457899999987766655555443 45678888777742111 1111 0 0011124
Q ss_pred CCHHHHHHHHHHHhCCC
Q 020854 256 PSTDVYARAAMRWIGYE 272 (320)
Q Consensus 256 ~~~~~~a~~i~~~l~~~ 272 (320)
-.+.+..++++..+..+
T Consensus 255 GhA~dYVEAMW~mLQ~d 271 (376)
T KOG1372|consen 255 GHAGDYVEAMWLMLQQD 271 (376)
T ss_pred chhHHHHHHHHHHHhcC
Confidence 56778888888888765
|
|
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0032 Score=59.25 Aligned_cols=82 Identities=15% Similarity=0.177 Sum_probs=54.4
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCC-CCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS-GDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~ 130 (320)
+.++|||||++.++|.++++.|.+.|++|++++.+..........+ . .. +.++.. .+....++.+.+...+
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~-----d-~~--~~~p~p~~d~~~~~~~L~~i~~~ 74 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV-----D-GF--YTIPSPRWDPDAYIQALLSIVQR 74 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh-----h-he--EEeCCCCCCHHHHHHHHHHHHHH
Confidence 3689999999999999999999999999999999865443221111 1 11 222211 1223455666665555
Q ss_pred CCeEEEEEccC
Q 020854 131 LDVGVLINNVG 141 (320)
Q Consensus 131 ~~id~lI~nAG 141 (320)
.++|+||....
T Consensus 75 ~~id~vIP~~e 85 (389)
T PRK06849 75 ENIDLLIPTCE 85 (389)
T ss_pred cCCCEEEECCh
Confidence 56778887654
|
|
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.009 Score=54.39 Aligned_cols=112 Identities=18% Similarity=0.322 Sum_probs=69.6
Q ss_pred EEEEECCCCcHHHHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHHHhhcC--CceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPDKLKDVSDSIQAKYA--KTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G--~~Vil~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.+.|.|+ |++|.++|..|+..| .+|+++++++++.+..+.++..... ....... . .+. +.+.
T Consensus 2 kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~--~~~---------~~l~- 67 (306)
T cd05291 2 KVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-A--GDY---------SDCK- 67 (306)
T ss_pred EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-c--CCH---------HHhC-
Confidence 5788886 999999999999999 4899999999998888887754321 1111111 1 111 1223
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC-CCcEEEEEcC
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGS 193 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-~~g~Iv~vsS 193 (320)
+-|++|+.+|.... + ..+. .+.++.|.- +++...+.+.+. +.+.|+++|-
T Consensus 68 -~aDIVIitag~~~~---~--g~~R---~dll~~N~~----i~~~~~~~i~~~~~~~~vivvsN 118 (306)
T cd05291 68 -DADIVVITAGAPQK---P--GETR---LDLLEKNAK----IMKSIVPKIKASGFDGIFLVASN 118 (306)
T ss_pred -CCCEEEEccCCCCC---C--CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCeEEEEecC
Confidence 34599999997532 1 2233 233455544 444444445443 4677777764
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0057 Score=56.25 Aligned_cols=80 Identities=13% Similarity=0.232 Sum_probs=53.6
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++++|+||+|++|..+++.+...|++|+.++++.++.+...+.+ +.. .. +|..++ .+..+.+.+..+ .
T Consensus 151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l-----Ga~-~v--i~~~~~-~~~~~~i~~~~~-~ 220 (338)
T cd08295 151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL-----GFD-DA--FNYKEE-PDLDAALKRYFP-N 220 (338)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc-----CCc-ee--EEcCCc-ccHHHHHHHhCC-C
Confidence 4899999999999999999888889999999999988766544323 221 11 222211 123334444333 3
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
.+|+++.+.|
T Consensus 221 gvd~v~d~~g 230 (338)
T cd08295 221 GIDIYFDNVG 230 (338)
T ss_pred CcEEEEECCC
Confidence 5789998877
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0056 Score=55.90 Aligned_cols=79 Identities=13% Similarity=0.177 Sum_probs=51.6
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|.+++|+||+|++|...++.....|++|+.++++.++.+.. .++ +.. ..+ |..+. +...+..+.....
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~l-----Ga~-~vi--~~~~~--~~~~~~~~~~~~~ 206 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKL-----GFD-VAF--NYKTV--KSLEETLKKASPD 206 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCC-EEE--ecccc--ccHHHHHHHhCCC
Confidence 489999999999999999888888899999999988775544 222 221 122 22221 1122222223333
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
.+|+++.+.|
T Consensus 207 gvdvv~d~~G 216 (325)
T TIGR02825 207 GYDCYFDNVG 216 (325)
T ss_pred CeEEEEECCC
Confidence 5889998877
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0065 Score=54.80 Aligned_cols=79 Identities=20% Similarity=0.370 Sum_probs=55.1
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++++|+|+++++|.++++.+...|++|+.++++.++.+.. .++ +.. ...+..+. +..+.+.+..++.
T Consensus 139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~--~~~~~~~~~~~~~ 207 (325)
T TIGR02824 139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EAL-----GAD---IAINYREE--DFVEVVKAETGGK 207 (325)
T ss_pred CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCc---EEEecCch--hHHHHHHHHcCCC
Confidence 478999999999999999999999999999999988765533 222 211 11222222 4445555555544
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
.+|++|+++|
T Consensus 208 ~~d~~i~~~~ 217 (325)
T TIGR02824 208 GVDVILDIVG 217 (325)
T ss_pred CeEEEEECCc
Confidence 6889999887
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized. |
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0047 Score=55.53 Aligned_cols=47 Identities=32% Similarity=0.527 Sum_probs=41.7
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQ 98 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~ 98 (320)
++||.++|.|+ ||.|++++..|++.|+ +|+++.|+.++.+++++++.
T Consensus 123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~ 170 (282)
T TIGR01809 123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGV 170 (282)
T ss_pred cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhh
Confidence 45899999976 9999999999999997 79999999999988887764
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0084 Score=54.94 Aligned_cols=114 Identities=23% Similarity=0.253 Sum_probs=65.4
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCC-------eEEEEeCCH--HHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHH
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGL-------NLVLVGRNP--DKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIK 125 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~-------~Vil~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 125 (320)
.|.||||+|.+|..++..|+..|. .+++.|+++ +.++..+.++..... .... ...+. ....
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~-~~~~--~~~i~-------~~~~ 71 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAF-PLLK--GVVIT-------TDPE 71 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcc-cccC--CcEEe-------cChH
Confidence 589999999999999999998663 499999987 443322222221100 0000 00010 1233
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC--CCcEEEEEc
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR--KKGAIVNIG 192 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~--~~g~Iv~vs 192 (320)
+.+.. .|++|+.||.... + ..+. .+.+..|+ .+++...+.+.+. +.+.++++|
T Consensus 72 ~~~~~--aDiVVitAG~~~~---~--g~tR---~dll~~N~----~i~~~i~~~i~~~~~~~~iiivvs 126 (323)
T cd00704 72 EAFKD--VDVAILVGAFPRK---P--GMER---ADLLRKNA----KIFKEQGEALNKVAKPTVKVLVVG 126 (323)
T ss_pred HHhCC--CCEEEEeCCCCCC---c--CCcH---HHHHHHhH----HHHHHHHHHHHHhCCCCeEEEEeC
Confidence 44454 4599999997532 2 2233 33444444 4566666666655 356677765
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0067 Score=56.39 Aligned_cols=65 Identities=15% Similarity=0.318 Sum_probs=53.3
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCH-------------------HHHHHHHHHHHhhcCCceEEE
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP-------------------DKLKDVSDSIQAKYAKTQIKS 108 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~ 108 (320)
.++++.+|+|.|+ ||+|..+++.|+..|. +++++|.+. .+.+..++.+++.++..++..
T Consensus 24 ~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~ 102 (355)
T PRK05597 24 QSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTV 102 (355)
T ss_pred HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEE
Confidence 3477899999988 8999999999999997 798988753 467778888988888888887
Q ss_pred EEEeCC
Q 020854 109 VVVDFS 114 (320)
Q Consensus 109 ~~~D~~ 114 (320)
+..+++
T Consensus 103 ~~~~i~ 108 (355)
T PRK05597 103 SVRRLT 108 (355)
T ss_pred EEeecC
Confidence 766554
|
|
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0051 Score=57.68 Aligned_cols=83 Identities=20% Similarity=0.404 Sum_probs=59.8
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCC-------------------HHHHHHHHHHHHhhcCCceEEEE
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRN-------------------PDKLKDVSDSIQAKYAKTQIKSV 109 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~ 109 (320)
++++++|+|.|+ ||+|.++++.|+..|. ++++++++ ..+.+.+.+.+++.++...+..+
T Consensus 132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~ 210 (376)
T PRK08762 132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV 210 (376)
T ss_pred HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence 466888888855 8999999999999998 79999987 45677778888888777776666
Q ss_pred EEeCCCCcHHHHHHHHHHHcCCCeEEEEEccC
Q 020854 110 VVDFSGDLDEGVERIKEAIEGLDVGVLINNVG 141 (320)
Q Consensus 110 ~~D~~~~~~~~~~~~~~~~~~~~id~lI~nAG 141 (320)
...+.+ +. +.+.+.+ .|+||++..
T Consensus 211 ~~~~~~---~~---~~~~~~~--~D~Vv~~~d 234 (376)
T PRK08762 211 QERVTS---DN---VEALLQD--VDVVVDGAD 234 (376)
T ss_pred eccCCh---HH---HHHHHhC--CCEEEECCC
Confidence 544432 12 2223333 458887764
|
|
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0078 Score=52.93 Aligned_cols=84 Identities=19% Similarity=0.318 Sum_probs=60.7
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCH-------------------HHHHHHHHHHHhhcCCceEEE
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP-------------------DKLKDVSDSIQAKYAKTQIKS 108 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~ 108 (320)
.+++++.|+|.|+ ||+|..+++.|+..|. +++++|.+. .+.+.+++.+++.++..++..
T Consensus 28 ~~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~ 106 (245)
T PRK05690 28 EKLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIET 106 (245)
T ss_pred HHhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEE
Confidence 3577899999998 9999999999999997 788887642 355666778888888888877
Q ss_pred EEEeCCCCcHHHHHHHHHHHcCCCeEEEEEccC
Q 020854 109 VVVDFSGDLDEGVERIKEAIEGLDVGVLINNVG 141 (320)
Q Consensus 109 ~~~D~~~~~~~~~~~~~~~~~~~~id~lI~nAG 141 (320)
+...++++ .+.+.+.. .|++|.+..
T Consensus 107 ~~~~i~~~------~~~~~~~~--~DiVi~~~D 131 (245)
T PRK05690 107 INARLDDD------ELAALIAG--HDLVLDCTD 131 (245)
T ss_pred EeccCCHH------HHHHHHhc--CCEEEecCC
Confidence 76655421 22333444 448887653
|
|
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.015 Score=53.07 Aligned_cols=116 Identities=16% Similarity=0.305 Sum_probs=74.1
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhhcCC-ceEEEEEEeCCCCcHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAK-TQIKSVVVDFSGDLDEGVERIKEA 127 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~ 127 (320)
.+++.+.|+|+ |++|.++|..++..|. ++++.|+++++++..+.++....+- .++.. .. ++ .+.
T Consensus 4 ~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i-~~---~~--------~~~ 70 (315)
T PRK00066 4 KQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKI-YA---GD--------YSD 70 (315)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEE-Ee---CC--------HHH
Confidence 45788999998 9999999999999986 7999999999888888887653211 11111 11 11 122
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC-CCcEEEEEcC
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGS 193 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-~~g~Iv~vsS 193 (320)
+...| ++|..||.... + ..+. .+.++.|.. +++.+.+.+.+. ..+.++++|-
T Consensus 71 ~~~ad--ivIitag~~~k---~--g~~R---~dll~~N~~----i~~~i~~~i~~~~~~~~vivvsN 123 (315)
T PRK00066 71 CKDAD--LVVITAGAPQK---P--GETR---LDLVEKNLK----IFKSIVGEVMASGFDGIFLVASN 123 (315)
T ss_pred hCCCC--EEEEecCCCCC---C--CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCeEEEEccC
Confidence 34435 99999997532 2 2333 233455544 444445555543 4677777764
|
|
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0071 Score=55.17 Aligned_cols=115 Identities=21% Similarity=0.224 Sum_probs=62.4
Q ss_pred CEEEEECCCCcHHHHHHHHHHH-c--CCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 54 SWALVTGPTDGIGKSFAFQLAK-T--GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~-~--G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
+.++|.||+|++|.+++..+.. . +..+++.+|++. .+...-++... .. ...+.....+ ++.+.+.
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~--~~-~~~i~~~~~~-------d~~~~l~- 68 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHI--PT-AVKIKGFSGE-------DPTPALE- 68 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcC--CC-CceEEEeCCC-------CHHHHcC-
Confidence 4689999999999999998855 2 347888898743 21111122210 10 1111110011 1223334
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcC
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGS 193 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS 193 (320)
+.|++|.++|.... + ..+. .+.+..|....-.+.+. |.+.+..++|.+.|
T Consensus 69 -~~DiVIitaG~~~~---~--~~~R---~dll~~N~~i~~~ii~~----i~~~~~~~ivivvs 118 (312)
T PRK05086 69 -GADVVLISAGVARK---P--GMDR---SDLFNVNAGIVKNLVEK----VAKTCPKACIGIIT 118 (312)
T ss_pred -CCCEEEEcCCCCCC---C--CCCH---HHHHHHHHHHHHHHHHH----HHHhCCCeEEEEcc
Confidence 35599999997542 1 2232 34456666555555444 55445555666555
|
|
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0079 Score=54.05 Aligned_cols=49 Identities=18% Similarity=0.374 Sum_probs=43.1
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhh
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAK 100 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~ 100 (320)
.+||.++|.|+ ||-|++++..|++.|+ +|.+++|+.++.+++++++...
T Consensus 125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~ 174 (283)
T PRK14027 125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNA 174 (283)
T ss_pred cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc
Confidence 45899999998 9999999999999997 7999999999999888877543
|
|
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0092 Score=51.30 Aligned_cols=82 Identities=20% Similarity=0.342 Sum_probs=60.0
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCH------------------HHHHHHHHHHHhhcCCceEEEEE
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP------------------DKLKDVSDSIQAKYAKTQIKSVV 110 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~------------------~~~~~~~~~l~~~~~~~~~~~~~ 110 (320)
++++++|+|.|+ ||+|..+++.|+..|. +++++|.+. .+.+...+.+.+.++..++..+.
T Consensus 25 ~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~ 103 (212)
T PRK08644 25 KLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHN 103 (212)
T ss_pred HHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEe
Confidence 477899999995 8999999999999998 599998862 35666677777877888887777
Q ss_pred EeCCCCcHHHHHHHHHHHcCCCeEEEEEcc
Q 020854 111 VDFSGDLDEGVERIKEAIEGLDVGVLINNV 140 (320)
Q Consensus 111 ~D~~~~~~~~~~~~~~~~~~~~id~lI~nA 140 (320)
..++++ .+.+.+.+ .|++|.+.
T Consensus 104 ~~i~~~------~~~~~~~~--~DvVI~a~ 125 (212)
T PRK08644 104 EKIDED------NIEELFKD--CDIVVEAF 125 (212)
T ss_pred eecCHH------HHHHHHcC--CCEEEECC
Confidence 666542 12233344 44777663
|
|
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0077 Score=55.80 Aligned_cols=80 Identities=13% Similarity=0.233 Sum_probs=53.1
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|.+++|+||+|++|...++.....|++|+.++++.++.+...+++ +.. .. .|..+. .+..+.+.+..+ .
T Consensus 158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l-----Ga~-~v--i~~~~~-~~~~~~i~~~~~-~ 227 (348)
T PLN03154 158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL-----GFD-EA--FNYKEE-PDLDAALKRYFP-E 227 (348)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc-----CCC-EE--EECCCc-ccHHHHHHHHCC-C
Confidence 4899999999999999999888889999999999888765543333 221 11 222211 122233433333 2
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
.+|+++.+.|
T Consensus 228 gvD~v~d~vG 237 (348)
T PLN03154 228 GIDIYFDNVG 237 (348)
T ss_pred CcEEEEECCC
Confidence 5789998887
|
|
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0076 Score=54.91 Aligned_cols=78 Identities=18% Similarity=0.243 Sum_probs=53.4
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|.+++|+||+|++|.++++.....|++|+.++++.++.+.+.+ + +.. .. .|..+. +..+++.+..+ .
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~-----Ga~-~v--i~~~~~--~~~~~v~~~~~-~ 210 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-L-----GFD-AV--FNYKTV--SLEEALKEAAP-D 210 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c-----CCC-EE--EeCCCc--cHHHHHHHHCC-C
Confidence 48999999999999999988888899999999998877554422 2 221 11 233322 33444444333 3
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
.+|+++.+.|
T Consensus 211 gvd~vld~~g 220 (329)
T cd08294 211 GIDCYFDNVG 220 (329)
T ss_pred CcEEEEECCC
Confidence 5789998776
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.023 Score=52.05 Aligned_cols=151 Identities=16% Similarity=0.103 Sum_probs=91.8
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCC-------eEEEEeCCHH--HHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGL-------NLVLVGRNPD--KLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVER 123 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~-------~Vil~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~ 123 (320)
-+.|.|+|++|.+|..+|..|+..|. ++++.|.+++ +++..+.++..... .... .+.+...
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~-~~~~--~~~i~~~------- 71 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAF-PLLA--EIVITDD------- 71 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccc-cccC--ceEEecC-------
Confidence 35789999999999999999998875 6999999543 35555555543210 0000 0111111
Q ss_pred HHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC--CcEEEEEcCccccc---
Q 020854 124 IKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK--KGAIVNIGSGAAIV--- 198 (320)
Q Consensus 124 ~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~--~g~Iv~vsS~~~~~--- 198 (320)
..+.+.. -|++|..||.... + ..+. .+.+..|+ .+++...+.+.+.. .+.++++|--.-..
T Consensus 72 ~~~~~~d--aDivvitaG~~~k---~--g~tR---~dll~~N~----~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~ 137 (322)
T cd01338 72 PNVAFKD--ADWALLVGAKPRG---P--GMER---ADLLKANG----KIFTAQGKALNDVASRDVKVLVVGNPCNTNALI 137 (322)
T ss_pred cHHHhCC--CCEEEEeCCCCCC---C--CCcH---HHHHHHHH----HHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHH
Confidence 1233443 4499999997532 2 2333 23345554 45566666665543 57777776422111
Q ss_pred ---cC-CCCCchhhHHHHHHHHHHHHHHHHHHc
Q 020854 199 ---IP-SDPLYSVYAATKAYIDQFSRSLYVEYR 227 (320)
Q Consensus 199 ---~~-~~~~~~~Y~asKaal~~~~~~l~~el~ 227 (320)
.. +.|....|++++..-..|...+++.+.
T Consensus 138 ~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lg 170 (322)
T cd01338 138 AMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAG 170 (322)
T ss_pred HHHHcCCCChHheEEehHHHHHHHHHHHHHHhC
Confidence 11 256677899999998999999998874
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK14968 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.029 Score=46.73 Aligned_cols=79 Identities=22% Similarity=0.239 Sum_probs=53.5
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCce-EEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQ-IKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.++.++-.|++.|. ++..+++++.+|+.++++++.++...+.+...+...+ +.++.+|..+.. ..
T Consensus 23 ~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-----------~~ 88 (188)
T PRK14968 23 KGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEPF-----------RG 88 (188)
T ss_pred CCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEeccccccc-----------cc
Confidence 47788888887766 5556666689999999999888777666655432212 667777765421 11
Q ss_pred CCeEEEEEccCCCC
Q 020854 131 LDVGVLINNVGISY 144 (320)
Q Consensus 131 ~~id~lI~nAG~~~ 144 (320)
..+|+++.|.....
T Consensus 89 ~~~d~vi~n~p~~~ 102 (188)
T PRK14968 89 DKFDVILFNPPYLP 102 (188)
T ss_pred cCceEEEECCCcCC
Confidence 15779999887644
|
|
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0075 Score=53.97 Aligned_cols=52 Identities=23% Similarity=0.446 Sum_probs=45.4
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhc
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKY 101 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~ 101 (320)
.+..|+.++|.|| ||-+++++..|++.|+ +|+++.|+.++.+++++.+.+.+
T Consensus 122 ~~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~ 174 (283)
T COG0169 122 VDVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELG 174 (283)
T ss_pred cccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc
Confidence 3456899999986 8899999999999996 79999999999999998887653
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0055 Score=51.13 Aligned_cols=89 Identities=17% Similarity=0.209 Sum_probs=54.1
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH------HHHHhhcCCceEEEEEEeCCCCcHHHH-
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVS------DSIQAKYAKTQIKSVVVDFSGDLDEGV- 121 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~------~~l~~~~~~~~~~~~~~D~~~~~~~~~- 121 (320)
..+.|+++.|.|. |.||+++|+.+...|++|+..+|+........ .++.+......+..+.+-.+++.+..+
T Consensus 32 ~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~~~~l~ell~~aDiv~~~~plt~~T~~li~ 110 (178)
T PF02826_consen 32 RELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVEYVSLDELLAQADIVSLHLPLTPETRGLIN 110 (178)
T ss_dssp S-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEEESSHHHHHHH-SEEEE-SSSSTTTTTSBS
T ss_pred cccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhcccccceeeehhhhcchhhhhhhhhccccccceeee
Confidence 3577999999976 99999999999999999999999876543111 112222223556777776665432333
Q ss_pred HHHHHHHcCCCeEEEEEccC
Q 020854 122 ERIKEAIEGLDVGVLINNVG 141 (320)
Q Consensus 122 ~~~~~~~~~~~id~lI~nAG 141 (320)
++..+..+.. .++-|.|
T Consensus 111 ~~~l~~mk~g---a~lvN~a 127 (178)
T PF02826_consen 111 AEFLAKMKPG---AVLVNVA 127 (178)
T ss_dssp HHHHHTSTTT---EEEEESS
T ss_pred eeeeeccccc---eEEEecc
Confidence 3334444432 4555555
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.012 Score=53.94 Aligned_cols=111 Identities=20% Similarity=0.199 Sum_probs=65.5
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCC-------eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHH------
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGL-------NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGV------ 121 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~-------~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~------ 121 (320)
++.|||++|.+|..++..|+..|. .+++.|++++.- .......|+.|......
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~--------------~a~g~~~Dl~d~~~~~~~~~~~~ 66 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK--------------VLEGVVMELMDCAFPLLDGVVPT 66 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc--------------ccceeEeehhcccchhcCceecc
Confidence 378999999999999999998664 499999975430 11222334443210000
Q ss_pred HHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC--CCcEEEEEcC
Q 020854 122 ERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR--KKGAIVNIGS 193 (320)
Q Consensus 122 ~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~--~~g~Iv~vsS 193 (320)
....+.+. +.|++|+.||.... + ..+ ..+.+..|+. +++...+.+.+. +.+.|+++|.
T Consensus 67 ~~~~~~~~--~aDiVVitAG~~~~---~--~~t---r~~ll~~N~~----i~k~i~~~i~~~~~~~~iiivvsN 126 (324)
T TIGR01758 67 HDPAVAFT--DVDVAILVGAFPRK---E--GME---RRDLLSKNVK----IFKEQGRALDKLAKKDCKVLVVGN 126 (324)
T ss_pred CChHHHhC--CCCEEEEcCCCCCC---C--CCc---HHHHHHHHHH----HHHHHHHHHHhhCCCCeEEEEeCC
Confidence 01233344 35599999997532 1 222 3445555554 556666666654 3577777764
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.021 Score=50.00 Aligned_cols=77 Identities=22% Similarity=0.346 Sum_probs=51.0
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++++|+|+++ +|.++++.+...|.+|+.++++.++.+.. +++ + .. .. +|..+. +..+.+. .....
T Consensus 134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g--~~-~~--~~~~~~--~~~~~~~-~~~~~ 200 (271)
T cd05188 134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KEL---G--AD-HV--IDYKEE--DLEEELR-LTGGG 200 (271)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHh---C--Cc-ee--ccCCcC--CHHHHHH-HhcCC
Confidence 588999999999 99999999989999999999988765443 222 1 11 11 222222 2223333 33333
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
.+|++++++|
T Consensus 201 ~~d~vi~~~~ 210 (271)
T cd05188 201 GADVVIDAVG 210 (271)
T ss_pred CCCEEEECCC
Confidence 5779999887
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0036 Score=53.29 Aligned_cols=48 Identities=19% Similarity=0.237 Sum_probs=41.2
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDS 96 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~ 96 (320)
..+++||+++|+|.+ .+|+.+|+.|.+.|++|++.+++.+++++..++
T Consensus 23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~ 70 (200)
T cd01075 23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAEL 70 (200)
T ss_pred CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence 345679999999995 899999999999999999999998877766543
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.049 Score=50.94 Aligned_cols=76 Identities=21% Similarity=0.267 Sum_probs=51.7
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
+.++.++|.|+ |.+|+..++.+...|++|++++|+.++++...+.+ +..+ ..+..+. +.+.+.+..
T Consensus 165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~-----g~~v---~~~~~~~-----~~l~~~l~~ 230 (370)
T TIGR00518 165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF-----GGRI---HTRYSNA-----YEIEDAVKR 230 (370)
T ss_pred CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc-----Ccee---EeccCCH-----HHHHHHHcc
Confidence 45677899987 79999999999999999999999988766544332 1111 1222222 234444454
Q ss_pred CCeEEEEEccCC
Q 020854 131 LDVGVLINNVGI 142 (320)
Q Consensus 131 ~~id~lI~nAG~ 142 (320)
.| ++|++++.
T Consensus 231 aD--vVI~a~~~ 240 (370)
T TIGR00518 231 AD--LLIGAVLI 240 (370)
T ss_pred CC--EEEEcccc
Confidence 44 99998865
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.012 Score=53.24 Aligned_cols=80 Identities=16% Similarity=0.230 Sum_probs=54.9
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.+++++|+|+++++|.++++.+...|++|+.++++.++.+.. .+. +.. ..+ |..+. ...+.+.+.....
T Consensus 144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~-----g~~-~~~--~~~~~--~~~~~~~~~~~~~ 212 (328)
T cd08268 144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LAL-----GAA-HVI--VTDEE--DLVAEVLRITGGK 212 (328)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc-----CCC-EEE--ecCCc--cHHHHHHHHhCCC
Confidence 478999999999999999999999999999999988765544 222 211 112 22211 3334455544444
Q ss_pred CeEEEEEccCC
Q 020854 132 DVGVLINNVGI 142 (320)
Q Consensus 132 ~id~lI~nAG~ 142 (320)
.+|++++++|.
T Consensus 213 ~~d~vi~~~~~ 223 (328)
T cd08268 213 GVDVVFDPVGG 223 (328)
T ss_pred CceEEEECCch
Confidence 68899998773
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08244 MDR_enoyl_red Possible enoyl reductase | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.013 Score=53.23 Aligned_cols=79 Identities=25% Similarity=0.397 Sum_probs=56.1
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|.+++|+|+++++|.++++.+...|++|+.++++.++.+.. +++ +.. . ..|..+. +..+.+.+..++.
T Consensus 142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~-----g~~-~--~~~~~~~--~~~~~~~~~~~~~ 210 (324)
T cd08244 142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RAL-----GAD-V--AVDYTRP--DWPDQVREALGGG 210 (324)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc-----CCC-E--EEecCCc--cHHHHHHHHcCCC
Confidence 478999999999999999999999999999999988876543 322 221 1 1233332 3445555555555
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
++|+++++.|
T Consensus 211 ~~d~vl~~~g 220 (324)
T cd08244 211 GVTVVLDGVG 220 (324)
T ss_pred CceEEEECCC
Confidence 6889999876
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr |
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.009 Score=56.60 Aligned_cols=75 Identities=13% Similarity=0.248 Sum_probs=54.9
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
+.|+.++|.|+ ||+|+.+++.|++.|+ +|+++.|+.++.+++++++. .. ... .++++.+.+.
T Consensus 179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~----~~--~~~----------~~~~l~~~l~ 241 (414)
T PRK13940 179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFR----NA--SAH----------YLSELPQLIK 241 (414)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhc----CC--eEe----------cHHHHHHHhc
Confidence 66899999998 9999999999999996 79999999988877766552 11 111 1133444455
Q ss_pred CCCeEEEEEccCCCC
Q 020854 130 GLDVGVLINNVGISY 144 (320)
Q Consensus 130 ~~~id~lI~nAG~~~ 144 (320)
..| +||++.+...
T Consensus 242 ~aD--iVI~aT~a~~ 254 (414)
T PRK13940 242 KAD--IIIAAVNVLE 254 (414)
T ss_pred cCC--EEEECcCCCC
Confidence 545 8999887543
|
|
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.016 Score=49.38 Aligned_cols=81 Identities=20% Similarity=0.369 Sum_probs=56.2
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCC---H---------------HHHHHHHHHHHhhcCCceEEEEE
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRN---P---------------DKLKDVSDSIQAKYAKTQIKSVV 110 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~---~---------------~~~~~~~~~l~~~~~~~~~~~~~ 110 (320)
+++.++|+|.|+ ||+|..+|+.|++.|. +++++|++ . .+.+...+.+.+.++..++..+.
T Consensus 18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~ 96 (200)
T TIGR02354 18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYD 96 (200)
T ss_pred HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEee
Confidence 467899999998 7899999999999998 79999987 2 22334455566666677777766
Q ss_pred EeCCCCcHHHHHHHHHHHcCCCeEEEEEc
Q 020854 111 VDFSGDLDEGVERIKEAIEGLDVGVLINN 139 (320)
Q Consensus 111 ~D~~~~~~~~~~~~~~~~~~~~id~lI~n 139 (320)
.+++++ .+.+.+.. .|+||-+
T Consensus 97 ~~i~~~------~~~~~~~~--~DlVi~a 117 (200)
T TIGR02354 97 EKITEE------NIDKFFKD--ADIVCEA 117 (200)
T ss_pred eeCCHh------HHHHHhcC--CCEEEEC
Confidence 666532 22333443 3477765
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.018 Score=47.89 Aligned_cols=76 Identities=17% Similarity=0.397 Sum_probs=54.2
Q ss_pred EEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCH------------------HHHHHHHHHHHhhcCCceEEEEEEeCCCC
Q 020854 56 ALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP------------------DKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116 (320)
Q Consensus 56 vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~------------------~~~~~~~~~l~~~~~~~~~~~~~~D~~~~ 116 (320)
|+|.|+ ||+|..+++.|++.|. +++++|.+. .+.+...+.+++.++..++..+...+.++
T Consensus 2 VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~~ 80 (174)
T cd01487 2 VGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDEN 80 (174)
T ss_pred EEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecChh
Confidence 677775 8999999999999998 699999864 34556667777777777877777666532
Q ss_pred cHHHHHHHHHHHcCCCeEEEEEcc
Q 020854 117 LDEGVERIKEAIEGLDVGVLINNV 140 (320)
Q Consensus 117 ~~~~~~~~~~~~~~~~id~lI~nA 140 (320)
.+.+.+.+ .|++|.+.
T Consensus 81 ------~~~~~l~~--~DlVi~~~ 96 (174)
T cd01487 81 ------NLEGLFGD--CDIVVEAF 96 (174)
T ss_pred ------hHHHHhcC--CCEEEECC
Confidence 22333444 44787663
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0018 Score=45.17 Aligned_cols=37 Identities=24% Similarity=0.289 Sum_probs=23.4
Q ss_pred CC-CEEEEECCCCcHHHHHHHHHH-HcCCeEEEEeCCHH
Q 020854 52 YG-SWALVTGPTDGIGKSFAFQLA-KTGLNLVLVGRNPD 88 (320)
Q Consensus 52 ~g-k~vlITGas~GIG~ala~~l~-~~G~~Vil~~r~~~ 88 (320)
.| |.|||+|+|+|.|+|-.-.++ ..|++.+-++.+.+
T Consensus 37 ~GpK~VLViGaStGyGLAsRIa~aFg~gA~TiGV~fEk~ 75 (78)
T PF12242_consen 37 NGPKKVLVIGASTGYGLASRIAAAFGAGADTIGVSFEKP 75 (78)
T ss_dssp TS-SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE----
T ss_pred CCCceEEEEecCCcccHHHHHHHHhcCCCCEEEEeeccC
Confidence 35 999999999999999444444 56788888776543
|
|
| >COG2130 Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.033 Score=49.70 Aligned_cols=158 Identities=16% Similarity=0.195 Sum_probs=100.2
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++++|+||+|+.|.-..+----+|++|+.++-..++..-+.+++ +.. ..+|-.++ +..+.+.+..+.
T Consensus 150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~l-----GfD---~~idyk~~--d~~~~L~~a~P~- 218 (340)
T COG2130 150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEEL-----GFD---AGIDYKAE--DFAQALKEACPK- 218 (340)
T ss_pred CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhc-----CCc---eeeecCcc--cHHHHHHHHCCC-
Confidence 3999999999999997655554457999999999998877665544 111 12233333 566777777664
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHHH
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAAT 211 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~as 211 (320)
.||+.+-|.|.- +..+.++.| +..+||+.++-++.+..+..| ++..
T Consensus 219 GIDvyfeNVGg~----------------------------v~DAv~~~l--n~~aRi~~CG~IS~YN~~~~~----~gp~ 264 (340)
T COG2130 219 GIDVYFENVGGE----------------------------VLDAVLPLL--NLFARIPVCGAISQYNAPELP----PGPR 264 (340)
T ss_pred CeEEEEEcCCch----------------------------HHHHHHHhh--ccccceeeeeehhhcCCCCCC----CCcc
Confidence 588999999842 124555656 456899999998887743111 1221
Q ss_pred HHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCccc
Q 020854 212 KAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCT 276 (320)
Q Consensus 212 Kaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~ 276 (320)
. +..-+... +++ -|++-++-.. .-+++..+.+..|+..+.+..
T Consensus 265 ~-----l~~l~~kr-----~~v----~Gfiv~~~~~--------~~~~e~~~~l~~wv~~GKi~~ 307 (340)
T COG2130 265 R-----LPLLMAKR-----LRV----QGFIVASDYD--------QRFPEALRELGGWVKEGKIQY 307 (340)
T ss_pred h-----hhHHHhhh-----hee----EEEEechhhh--------hhhHHHHHHHHHHHHcCceee
Confidence 1 11111111 222 3555544443 257789999999999885533
|
|
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.015 Score=50.57 Aligned_cols=83 Identities=23% Similarity=0.357 Sum_probs=60.4
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCC-------------------HHHHHHHHHHHHhhcCCceEEEE
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRN-------------------PDKLKDVSDSIQAKYAKTQIKSV 109 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~ 109 (320)
++++++|+|.| .||+|.++|+.|+..|. +++++|.+ ..+.+.+++.+++.+|..++..+
T Consensus 18 ~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~ 96 (228)
T cd00757 18 KLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY 96 (228)
T ss_pred HHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence 46688999998 68999999999999997 78887643 24567778888888888888887
Q ss_pred EEeCCCCcHHHHHHHHHHHcCCCeEEEEEccC
Q 020854 110 VVDFSGDLDEGVERIKEAIEGLDVGVLINNVG 141 (320)
Q Consensus 110 ~~D~~~~~~~~~~~~~~~~~~~~id~lI~nAG 141 (320)
+.+++. + .+.+.+.. .|++|.+..
T Consensus 97 ~~~i~~---~---~~~~~~~~--~DvVi~~~d 120 (228)
T cd00757 97 NERLDA---E---NAEELIAG--YDLVLDCTD 120 (228)
T ss_pred cceeCH---H---HHHHHHhC--CCEEEEcCC
Confidence 766642 1 22333343 458887754
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0098 Score=54.09 Aligned_cols=42 Identities=33% Similarity=0.452 Sum_probs=37.2
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV 93 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~ 93 (320)
.|.+++|+||++++|.++++.+...|++|+.++++.++.+..
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~ 203 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL 203 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence 478999999999999999999999999999999888765543
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >cd05288 PGDH Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.016 Score=52.67 Aligned_cols=79 Identities=18% Similarity=0.278 Sum_probs=53.9
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|.+++|+|+++++|.++++.+.+.|++|+.++++.++.+...+.+ +.. ..+ |..+. +..+++.+..+ .
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~-----g~~-~~~--~~~~~--~~~~~v~~~~~-~ 213 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEEL-----GFD-AAI--NYKTP--DLAEALKEAAP-D 213 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhc-----CCc-eEE--ecCCh--hHHHHHHHhcc-C
Confidence 4799999999999999999999999999999999887755443222 211 111 22222 33444444443 3
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
++|+++.++|
T Consensus 214 ~~d~vi~~~g 223 (329)
T cd05288 214 GIDVYFDNVG 223 (329)
T ss_pred CceEEEEcch
Confidence 6789998876
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino |
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.016 Score=45.95 Aligned_cols=80 Identities=21% Similarity=0.444 Sum_probs=57.7
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCC-------------------HHHHHHHHHHHHhhcCCceEEEEEEe
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRN-------------------PDKLKDVSDSIQAKYAKTQIKSVVVD 112 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~D 112 (320)
+++|+|.|+ ||+|.++++.|+..|. +++++|.+ ..+.+...+.+++.+|..++..+..+
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~ 80 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK 80 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence 567777775 8999999999999998 79998763 23567778888888888898888887
Q ss_pred CCCCcHHHHHHHHHHHcCCCeEEEEEccC
Q 020854 113 FSGDLDEGVERIKEAIEGLDVGVLINNVG 141 (320)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~id~lI~nAG 141 (320)
+.+ +. ..+.+.. .|++|.+..
T Consensus 81 ~~~---~~---~~~~~~~--~d~vi~~~d 101 (135)
T PF00899_consen 81 IDE---EN---IEELLKD--YDIVIDCVD 101 (135)
T ss_dssp CSH---HH---HHHHHHT--SSEEEEESS
T ss_pred ccc---cc---ccccccC--CCEEEEecC
Confidence 732 22 2233344 448887654
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >PRK12480 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.086 Score=48.49 Aligned_cols=90 Identities=19% Similarity=0.179 Sum_probs=56.8
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH---HHHHhhcCCceEEEEEEeCCCCcHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVS---DSIQAKYAKTQIKSVVVDFSGDLDEGVERIKE 126 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~---~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 126 (320)
.++|+++.|.|. |.||+++|+.|...|++|+..+|+.+...... .++.+......+..+.+-.+.+....+. .+
T Consensus 143 ~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~~t~~li~--~~ 219 (330)
T PRK12480 143 PVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANKESYHLFD--KA 219 (330)
T ss_pred ccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcHHHHHHHh--HH
Confidence 477999999976 77999999999999999999999875432211 1233323355666666655543333332 23
Q ss_pred HHcCCCeEEEEEccCC
Q 020854 127 AIEGLDVGVLINNVGI 142 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~ 142 (320)
.+...+.+.++-|+|-
T Consensus 220 ~l~~mk~gavlIN~aR 235 (330)
T PRK12480 220 MFDHVKKGAILVNAAR 235 (330)
T ss_pred HHhcCCCCcEEEEcCC
Confidence 3333334456666664
|
|
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.033 Score=50.73 Aligned_cols=119 Identities=21% Similarity=0.295 Sum_probs=68.0
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCH--HHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNP--DKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.+.|+|++|.+|..++..++..|. +|++++|+. ++++....++.+........ ..+..+++ .+.+..
T Consensus 2 kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~-~~i~~~~d--------~~~l~~ 72 (309)
T cd05294 2 KVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGID-AEIKISSD--------LSDVAG 72 (309)
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCC-cEEEECCC--------HHHhCC
Confidence 589999999999999999999986 499999965 55554444443210000000 11222211 122444
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcc
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGA 195 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~ 195 (320)
.| ++|..+|.... .+.+. .+.++.|+.-.....+.+.+. .+++.|+++++..
T Consensus 73 aD--iViitag~p~~-----~~~~r---~dl~~~n~~i~~~~~~~i~~~---~~~~~viv~~npv 124 (309)
T cd05294 73 SD--IVIITAGVPRK-----EGMSR---LDLAKKNAKIVKKYAKQIAEF---APDTKILVVTNPV 124 (309)
T ss_pred CC--EEEEecCCCCC-----CCCCH---HHHHHHHHHHHHHHHHHHHHH---CCCeEEEEeCCch
Confidence 45 99999987432 12332 233455555444444444332 2467888888743
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0061 Score=58.96 Aligned_cols=48 Identities=19% Similarity=0.354 Sum_probs=41.2
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI 97 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l 97 (320)
..+.+++++|+|+ ||+|++++..|++.|++|++++|+.++.++..+++
T Consensus 328 ~~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~ 375 (477)
T PRK09310 328 IPLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRC 375 (477)
T ss_pred CCcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence 3466899999996 79999999999999999999999988877665543
|
|
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.031 Score=44.70 Aligned_cols=78 Identities=21% Similarity=0.444 Sum_probs=56.0
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCC-------------------HHHHHHHHHHHHhhcCCceEEEEEEeCC
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRN-------------------PDKLKDVSDSIQAKYAKTQIKSVVVDFS 114 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~D~~ 114 (320)
+++|.|+ ||+|.++++.|+..|. ++.++|.+ ..+.+..++.+++.+|..++..+..++.
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~ 79 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS 79 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence 3778886 9999999999999998 78888754 1355667777888888888888777765
Q ss_pred CCcHHHHHHHHHHHcCCCeEEEEEccC
Q 020854 115 GDLDEGVERIKEAIEGLDVGVLINNVG 141 (320)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~id~lI~nAG 141 (320)
+. . ..+.+.. .|++|.+..
T Consensus 80 ~~--~----~~~~~~~--~diVi~~~d 98 (143)
T cd01483 80 ED--N----LDDFLDG--VDLVIDAID 98 (143)
T ss_pred hh--h----HHHHhcC--CCEEEECCC
Confidence 43 1 1333444 448887654
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.024 Score=51.15 Aligned_cols=50 Identities=22% Similarity=0.307 Sum_probs=40.6
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCH---HHHHHHHHHHHh
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP---DKLKDVSDSIQA 99 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~---~~~~~~~~~l~~ 99 (320)
.+++||+++|.|+ ||-+++++..|+..|+ +|.+++|+. ++.+++++++..
T Consensus 120 ~~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~ 173 (288)
T PRK12749 120 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNE 173 (288)
T ss_pred CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhh
Confidence 3467899999997 6669999999999997 899999994 467777766643
|
|
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.032 Score=51.70 Aligned_cols=37 Identities=24% Similarity=0.355 Sum_probs=34.0
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP 87 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~ 87 (320)
.++||++.|.|- |.||+++|+.+...|++|+.++|+.
T Consensus 156 ~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~ 192 (347)
T PLN02928 156 TLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSW 192 (347)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCC
Confidence 477999999997 8999999999999999999999873
|
|
| >cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.024 Score=51.37 Aligned_cols=79 Identities=20% Similarity=0.376 Sum_probs=55.8
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|.+++|.|+++++|.++++.....|++|+.+.++.++.+...+ + +.. ..+ +..+. +..+.+.+..++.
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~-----g~~-~~~--~~~~~--~~~~~i~~~~~~~ 207 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-L-----GIG-PVV--STEQP--GWQDKVREAAGGA 207 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-c-----CCC-EEE--cCCCc--hHHHHHHHHhCCC
Confidence 47899999999999999999999999999999888877554432 2 221 111 22222 4445566655655
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
++|+++.++|
T Consensus 208 ~~d~v~d~~g 217 (324)
T cd08292 208 PISVALDSVG 217 (324)
T ss_pred CCcEEEECCC
Confidence 6889998877
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina |
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.053 Score=52.63 Aligned_cols=42 Identities=17% Similarity=0.086 Sum_probs=36.6
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV 93 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~ 93 (320)
..+.+|+|+|+ |.+|...+..+...|++|+++|++.++++..
T Consensus 163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~a 204 (509)
T PRK09424 163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQV 204 (509)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 45899999987 7899999999999999999999999887644
|
|
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.0092 Score=49.27 Aligned_cols=44 Identities=20% Similarity=0.324 Sum_probs=37.9
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD 92 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~ 92 (320)
.++.||.++|.|++.-.|..+++.|.++|++|.++.|+.+++.+
T Consensus 40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~~ 83 (168)
T cd01080 40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLKE 83 (168)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHHH
Confidence 35779999999997778999999999999999999998765543
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.029 Score=50.19 Aligned_cols=68 Identities=15% Similarity=0.276 Sum_probs=53.8
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCH-------------------HHHHHHHHHHHhhcCCceEE
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP-------------------DKLKDVSDSIQAKYAKTQIK 107 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~-------------------~~~~~~~~~l~~~~~~~~~~ 107 (320)
..++++..|+|.|+ ||+|..+++.|+..|. ++.++|.+. .|.+..++.+++.++..++.
T Consensus 22 Q~kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~ 100 (287)
T PRK08223 22 QQRLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIR 100 (287)
T ss_pred HHHHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEE
Confidence 33577899999976 6999999999999997 788888642 35566777888888888888
Q ss_pred EEEEeCCCC
Q 020854 108 SVVVDFSGD 116 (320)
Q Consensus 108 ~~~~D~~~~ 116 (320)
.++..++++
T Consensus 101 ~~~~~l~~~ 109 (287)
T PRK08223 101 AFPEGIGKE 109 (287)
T ss_pred EEecccCcc
Confidence 888777643
|
|
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.072 Score=47.31 Aligned_cols=115 Identities=25% Similarity=0.372 Sum_probs=69.8
Q ss_pred EEEECCCCcHHHHHHHHHHHcC----CeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 56 ALVTGPTDGIGKSFAFQLAKTG----LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 56 vlITGas~GIG~ala~~l~~~G----~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
+.|+||+|.+|..++..|+..| .+|++.|+++++++....+++...... ....+-.+++ ..+.+...
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~--~~~~i~~~~d-------~~~~~~~a 71 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL--ADIKVSITDD-------PYEAFKDA 71 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc--cCcEEEECCc-------hHHHhCCC
Confidence 4689998899999999999998 689999999988888777775432111 1122222222 23334444
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhc-CCCcEEEEEcC
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK-RKKGAIVNIGS 193 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~-~~~g~Iv~vsS 193 (320)
| ++|..+|.... . ..+. ...+..|. .+.+...+.+.+ .+++.++++|-
T Consensus 72 D--iVv~t~~~~~~-~----g~~r---~~~~~~n~----~i~~~i~~~i~~~~p~a~~i~~tN 120 (263)
T cd00650 72 D--VVIITAGVGRK-P----GMGR---LDLLKRNV----PIVKEIGDNIEKYSPDAWIIVVSN 120 (263)
T ss_pred C--EEEECCCCCCC-c----CCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecC
Confidence 5 99999987542 1 1222 12223333 344444444543 34677777754
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.035 Score=48.66 Aligned_cols=83 Identities=19% Similarity=0.326 Sum_probs=57.4
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCH-------------------HHHHHHHHHHHhhcCCceEEEE
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP-------------------DKLKDVSDSIQAKYAKTQIKSV 109 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~ 109 (320)
++++.+|+|.|+ ||+|..+++.|+..|. +++++|.+. .|.+..++.+++.++...+..+
T Consensus 21 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~ 99 (240)
T TIGR02355 21 ALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPI 99 (240)
T ss_pred HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEE
Confidence 466888888875 7999999999999997 788888642 3455667778888888777776
Q ss_pred EEeCCCCcHHHHHHHHHHHcCCCeEEEEEccC
Q 020854 110 VVDFSGDLDEGVERIKEAIEGLDVGVLINNVG 141 (320)
Q Consensus 110 ~~D~~~~~~~~~~~~~~~~~~~~id~lI~nAG 141 (320)
...++++ .+.+.+.+.| ++|.+..
T Consensus 100 ~~~i~~~------~~~~~~~~~D--lVvd~~D 123 (240)
T TIGR02355 100 NAKLDDA------ELAALIAEHD--IVVDCTD 123 (240)
T ss_pred eccCCHH------HHHHHhhcCC--EEEEcCC
Confidence 5544321 2233344434 7776653
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.049 Score=62.32 Aligned_cols=176 Identities=14% Similarity=0.076 Sum_probs=99.1
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHH-c
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI-E 129 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~ 129 (320)
+.|+.++|++..+++|.+++.+|.++|+.|+++.....- ......+ +..+..+.++-.|+ ..++.+.+.+ .
T Consensus 1753 ~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~~-~~~~~~~-----~~~~~~~~~~~~~~--~~~~~~~~~~~~ 1824 (2582)
T TIGR02813 1753 QSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWVV-SHSASPL-----ASAIASVTLGTIDD--TSIEAVIKDIEE 1824 (2582)
T ss_pred ccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeeccccc-ccccccc-----ccccccccccccch--HHHHHHHHhhhc
Confidence 447888999889999999999999999998877422110 0000000 11122223222222 3333332222 1
Q ss_pred -CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 130 -GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 130 -~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
..+++.+||-.+............ .+...-..-+...|.+.|.+.+.+...+.+.++.+|...|.. +..+...-
T Consensus 1825 ~~~~~~g~i~l~~~~~~~~~~~~~~---~~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~--g~~~~~~~ 1899 (2582)
T TIGR02813 1825 KTAQIDGFIHLQPQHKSVADKVDAI---ELPEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDGGF--GYSNGDAD 1899 (2582)
T ss_pred cccccceEEEecccccccccccccc---ccchhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCCcc--ccCCcccc
Confidence 124668888766432100001111 011111233445677888877766655678899999988766 32221111
Q ss_pred --------HHHHHHHHHHHHHHHHHHccCCceEEEEecc
Q 020854 209 --------AATKAYIDQFSRSLYVEYRKSGIDVQCQVPL 239 (320)
Q Consensus 209 --------~asKaal~~~~~~l~~el~~~gi~v~~v~PG 239 (320)
....+++.+|+|+++.|+....+|...+.|.
T Consensus 1900 ~~~~~~~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~ 1938 (2582)
T TIGR02813 1900 SGTQQVKAELNQAALAGLTKTLNHEWNAVFCRALDLAPK 1938 (2582)
T ss_pred ccccccccchhhhhHHHHHHhHHHHCCCCeEEEEeCCCC
Confidence 2357999999999999986655666666564
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.032 Score=51.24 Aligned_cols=78 Identities=22% Similarity=0.312 Sum_probs=53.1
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLN-LVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~-Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|++++|+|+ |++|...++.+...|++ |+.+++++++.+.. +++ +.. . .+|..+. + .+++.+..+.
T Consensus 163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~-----ga~-~--~i~~~~~--~-~~~~~~~~~~ 229 (339)
T cd08239 163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KAL-----GAD-F--VINSGQD--D-VQEIRELTSG 229 (339)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh-----CCC-E--EEcCCcc--h-HHHHHHHhCC
Confidence 3899999986 89999999998889998 99999988876543 333 221 1 1233322 2 4555554444
Q ss_pred CCeEEEEEccCC
Q 020854 131 LDVGVLINNVGI 142 (320)
Q Consensus 131 ~~id~lI~nAG~ 142 (320)
..+|++|.+.|.
T Consensus 230 ~~~d~vid~~g~ 241 (339)
T cd08239 230 AGADVAIECSGN 241 (339)
T ss_pred CCCCEEEECCCC
Confidence 457799988873
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at |
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.072 Score=49.11 Aligned_cols=90 Identities=13% Similarity=0.199 Sum_probs=54.5
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-----HHHHhhcCCceEEEEEEeCCCCcHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVS-----DSIQAKYAKTQIKSVVVDFSGDLDEGVERI 124 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~ 124 (320)
.+.||++.|.|- |.||+++|+.|...|++|+..+|+........ .++.+......+..+.+-.+++.+..+..
T Consensus 147 ~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lP~t~~T~~~i~~- 224 (333)
T PRK13243 147 DVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKPEAEKELGAEYRPLEELLRESDFVSLHVPLTKETYHMINE- 224 (333)
T ss_pred CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCChhhHHHcCCEecCHHHHHhhCCEEEEeCCCChHHhhccCH-
Confidence 478999999998 99999999999999999999998754321100 01222222445666666555433333321
Q ss_pred HHHHcCCCeEEEEEccCC
Q 020854 125 KEAIEGLDVGVLINNVGI 142 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~ 142 (320)
+.+...+.+.++-|.|-
T Consensus 225 -~~~~~mk~ga~lIN~aR 241 (333)
T PRK13243 225 -ERLKLMKPTAILVNTAR 241 (333)
T ss_pred -HHHhcCCCCeEEEECcC
Confidence 23333333355555553
|
|
| >cd05282 ETR_like 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.033 Score=50.41 Aligned_cols=79 Identities=20% Similarity=0.436 Sum_probs=55.3
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|.+++|.|+++++|.++++.+...|++|+.++++.++.+.. +++ +.. . ..+..+ .+..+++.+..++.
T Consensus 138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~-~--~~~~~~--~~~~~~~~~~~~~~ 206 (323)
T cd05282 138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KAL-----GAD-E--VIDSSP--EDLAQRVKEATGGA 206 (323)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-Hhc-----CCC-E--Eecccc--hhHHHHHHHHhcCC
Confidence 578999999999999999999999999999999988765543 222 211 1 112122 24455566555555
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
.+|+++.+.|
T Consensus 207 ~~d~vl~~~g 216 (323)
T cd05282 207 GARLALDAVG 216 (323)
T ss_pred CceEEEECCC
Confidence 6889998887
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman |
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.037 Score=51.73 Aligned_cols=65 Identities=17% Similarity=0.315 Sum_probs=52.1
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCC-------------------HHHHHHHHHHHHhhcCCceEEE
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRN-------------------PDKLKDVSDSIQAKYAKTQIKS 108 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~ 108 (320)
.++++.+|+|.|+ ||+|..+++.|+..|. +++++|.+ ..|.+.+++.+.+.+++.++..
T Consensus 37 ~~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~ 115 (370)
T PRK05600 37 ERLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNA 115 (370)
T ss_pred HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEE
Confidence 3467888999976 7999999999999996 89998875 2456677788888888888877
Q ss_pred EEEeCC
Q 020854 109 VVVDFS 114 (320)
Q Consensus 109 ~~~D~~ 114 (320)
+...++
T Consensus 116 ~~~~i~ 121 (370)
T PRK05600 116 LRERLT 121 (370)
T ss_pred eeeecC
Confidence 776665
|
|
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.012 Score=53.13 Aligned_cols=78 Identities=24% Similarity=0.287 Sum_probs=60.4
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCe
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV 133 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 133 (320)
...+|-||+|--|.-+|++|+.+|.+-.+.+||..++..+.+++ +.....+++++ . +.++++ ..+.+
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L-----G~~~~~~p~~~--p--~~~~~~---~~~~~- 73 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL-----GPEAAVFPLGV--P--AALEAM---ASRTQ- 73 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc-----CccccccCCCC--H--HHHHHH---Hhcce-
Confidence 55899999999999999999999999999999999999988887 44444555554 2 333333 34434
Q ss_pred EEEEEccCCCCC
Q 020854 134 GVLINNVGISYP 145 (320)
Q Consensus 134 d~lI~nAG~~~~ 145 (320)
+|+|++|....
T Consensus 74 -VVlncvGPyt~ 84 (382)
T COG3268 74 -VVLNCVGPYTR 84 (382)
T ss_pred -EEEeccccccc
Confidence 99999997654
|
|
| >PTZ00354 alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.046 Score=49.72 Aligned_cols=80 Identities=15% Similarity=0.271 Sum_probs=54.9
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|.+++|+|+++++|.++++.+.+.|++++++.++.++.+.+ .++ +.. .. .+..+. ....+++.+..++.
T Consensus 140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~-~~--~~~~~~-~~~~~~~~~~~~~~ 209 (334)
T PTZ00354 140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC-KKL-----AAI-IL--IRYPDE-EGFAPKVKKLTGEK 209 (334)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCc-EE--EecCCh-hHHHHHHHHHhCCC
Confidence 478999999999999999999999999988888888765554 222 221 11 122221 12455565555555
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
++|+++++.|
T Consensus 210 ~~d~~i~~~~ 219 (334)
T PTZ00354 210 GVNLVLDCVG 219 (334)
T ss_pred CceEEEECCc
Confidence 6889998876
|
|
| >cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.013 Score=46.73 Aligned_cols=45 Identities=20% Similarity=0.288 Sum_probs=39.7
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD 92 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~ 92 (320)
.++++||.++|.|.|.-.|+.++..|.++|++|++++++...+++
T Consensus 23 ~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~ 67 (140)
T cd05212 23 GVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQS 67 (140)
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHH
Confidence 456789999999999999999999999999999999977655554
|
NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional |
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.028 Score=52.03 Aligned_cols=81 Identities=28% Similarity=0.381 Sum_probs=54.9
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
-.|+.+||.||+||.|.+.++-....|+..++++++.++.+ +.+++ +. -+ .+|-.+. +.++++.+.. .
T Consensus 156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~-l~k~l-----GA-d~--vvdy~~~--~~~e~~kk~~-~ 223 (347)
T KOG1198|consen 156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLE-LVKKL-----GA-DE--VVDYKDE--NVVELIKKYT-G 223 (347)
T ss_pred CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHH-HHHHc-----CC-cE--eecCCCH--HHHHHHHhhc-C
Confidence 46899999999999999999999889966666666655543 23333 21 12 2343332 5666666655 4
Q ss_pred CCeEEEEEccCCC
Q 020854 131 LDVGVLINNVGIS 143 (320)
Q Consensus 131 ~~id~lI~nAG~~ 143 (320)
..+|+|+-++|..
T Consensus 224 ~~~DvVlD~vg~~ 236 (347)
T KOG1198|consen 224 KGVDVVLDCVGGS 236 (347)
T ss_pred CCccEEEECCCCC
Confidence 4688999999863
|
|
| >cd05286 QOR2 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.047 Score=48.89 Aligned_cols=79 Identities=20% Similarity=0.318 Sum_probs=54.2
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++++|.|+++++|.++++.....|++|+.++++.++.+.. .++ +.. ..+ +..+ ....+.+.+..+..
T Consensus 136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~-~~~--~~~~--~~~~~~~~~~~~~~ 204 (320)
T cd05286 136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA-RAA-----GAD-HVI--NYRD--EDFVERVREITGGR 204 (320)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHC-----CCC-EEE--eCCc--hhHHHHHHHHcCCC
Confidence 479999999999999999999999999999999888775543 222 221 111 1111 23444555544444
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
.+|+++++.|
T Consensus 205 ~~d~vl~~~~ 214 (320)
T cd05286 205 GVDVVYDGVG 214 (320)
T ss_pred CeeEEEECCC
Confidence 6889998876
|
Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone |
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.058 Score=49.21 Aligned_cols=90 Identities=14% Similarity=0.147 Sum_probs=57.3
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHH---HH--HHHHHhhcCCceEEEEEEeCCCCcHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK---DV--SDSIQAKYAKTQIKSVVVDFSGDLDEGVERI 124 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~---~~--~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~ 124 (320)
.++||++.|.| .|.||+++|+.|...|++|+..+|+.++.. .. ..++.+.-+...+..+.+-.+++.+..+.
T Consensus 133 ~l~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~~~~~~~~~~~~l~e~l~~aDvvv~~lPlt~~T~~li~-- 209 (312)
T PRK15469 133 HREDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSWPGVQSFAGREELSAFLSQTRVLINLLPNTPETVGIIN-- 209 (312)
T ss_pred CcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCCCCceeecccccHHHHHhcCCEEEECCCCCHHHHHHhH--
Confidence 46799999987 578999999999999999999998654311 00 11222222355677776666655444443
Q ss_pred HHHHcCCCeEEEEEccCC
Q 020854 125 KEAIEGLDVGVLINNVGI 142 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~ 142 (320)
.+.+...+.+.++-|.|-
T Consensus 210 ~~~l~~mk~ga~lIN~aR 227 (312)
T PRK15469 210 QQLLEQLPDGAYLLNLAR 227 (312)
T ss_pred HHHHhcCCCCcEEEECCC
Confidence 233444444466666664
|
|
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.038 Score=50.21 Aligned_cols=59 Identities=19% Similarity=0.323 Sum_probs=47.1
Q ss_pred EEEECCCCcHHHHHHHHHHHcCC-eEEEEeCC-------------------HHHHHHHHHHHHhhcCCceEEEEEEeCCC
Q 020854 56 ALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRN-------------------PDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115 (320)
Q Consensus 56 vlITGas~GIG~ala~~l~~~G~-~Vil~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~D~~~ 115 (320)
|+|.|+ ||+|.++++.|+..|. ++.++|.+ ..+.+..++.+++.++..++..+..++.+
T Consensus 2 VlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~~ 80 (312)
T cd01489 2 VLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIKD 80 (312)
T ss_pred EEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCCC
Confidence 678886 9999999999999997 78888753 24556677778888888888888777765
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.058 Score=49.10 Aligned_cols=117 Identities=20% Similarity=0.293 Sum_probs=69.2
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
.+.|+|++|.+|.++|..|+.+|. +++++|.+ +++..+-++........+.... .+ +++.+.+..
T Consensus 2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~---~~------~~~y~~~~d-- 68 (310)
T cd01337 2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYL---GP------EELKKALKG-- 68 (310)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEec---CC------CchHHhcCC--
Confidence 578999999999999999998884 79999998 4444444443321111222110 11 112333444
Q ss_pred eEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcc
Q 020854 133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGA 195 (320)
Q Consensus 133 id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~ 195 (320)
-|++|..||.... + ..+. .+.++.|..-.-.+.+.+.++ .+++.|+++|--.
T Consensus 69 aDivvitaG~~~k---~--g~tR---~dll~~N~~i~~~i~~~i~~~---~p~a~vivvtNPv 120 (310)
T cd01337 69 ADVVVIPAGVPRK---P--GMTR---DDLFNINAGIVRDLATAVAKA---CPKALILIISNPV 120 (310)
T ss_pred CCEEEEeCCCCCC---C--CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCeEEEEccCch
Confidence 4499999997532 2 2333 344566665555555554332 3467888887654
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.04 Score=48.07 Aligned_cols=59 Identities=15% Similarity=0.292 Sum_probs=45.5
Q ss_pred EEEECCCCcHHHHHHHHHHHcCC-eEEEEeCC-------------------HHHHHHHHHHHHhhcCCceEEEEEEeCCC
Q 020854 56 ALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRN-------------------PDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115 (320)
Q Consensus 56 vlITGas~GIG~ala~~l~~~G~-~Vil~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~D~~~ 115 (320)
|+|.| .||+|.++++.|+..|. ++.++|.+ ..|.+.+++.+++.+++.++..+..++.+
T Consensus 2 VlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~~ 80 (234)
T cd01484 2 VLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVGP 80 (234)
T ss_pred EEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCCh
Confidence 56666 78999999999999997 78888764 23455667777888888888887777654
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou |
| >cd08241 QOR1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.048 Score=48.98 Aligned_cols=80 Identities=23% Similarity=0.330 Sum_probs=54.2
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++++|+|+++++|.++++.+...|++|+.++++.++.+... ++ +.. ..+ +..+. +..+.+.+..+..
T Consensus 139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~-----g~~-~~~--~~~~~--~~~~~i~~~~~~~ 207 (323)
T cd08241 139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALAR-AL-----GAD-HVI--DYRDP--DLRERVKALTGGR 207 (323)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHH-Hc-----CCc-eee--ecCCc--cHHHHHHHHcCCC
Confidence 4789999999999999999999999999999999877655432 21 211 111 21111 3344455444444
Q ss_pred CeEEEEEccCC
Q 020854 132 DVGVLINNVGI 142 (320)
Q Consensus 132 ~id~lI~nAG~ 142 (320)
.+|.++++.|.
T Consensus 208 ~~d~v~~~~g~ 218 (323)
T cd08241 208 GVDVVYDPVGG 218 (323)
T ss_pred CcEEEEECccH
Confidence 68899988773
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic |
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.035 Score=52.85 Aligned_cols=46 Identities=22% Similarity=0.411 Sum_probs=40.0
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcC-CeEEEEeCCHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSI 97 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G-~~Vil~~r~~~~~~~~~~~l 97 (320)
+.|++++|.|+ |.+|..+++.|.+.| .+|++++|+.++.++.++++
T Consensus 178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~ 224 (417)
T TIGR01035 178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL 224 (417)
T ss_pred ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence 56899999997 999999999999999 68999999998877666544
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.04 Score=50.43 Aligned_cols=73 Identities=23% Similarity=0.452 Sum_probs=51.1
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++|+|+|.+ |+|.--++-....|++|+..+|++++++... ++ +... .+ |.+|+ +..+.+.+.
T Consensus 166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~-~l-----GAd~-~i--~~~~~--~~~~~~~~~---- 229 (339)
T COG1064 166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAK-KL-----GADH-VI--NSSDS--DALEAVKEI---- 229 (339)
T ss_pred CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHH-Hh-----CCcE-EE--EcCCc--hhhHHhHhh----
Confidence 48999999999 9999888877779999999999999876543 33 2221 22 22232 334444442
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
+|++|..++
T Consensus 230 -~d~ii~tv~ 238 (339)
T COG1064 230 -ADAIIDTVG 238 (339)
T ss_pred -CcEEEECCC
Confidence 569998887
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.015 Score=52.34 Aligned_cols=43 Identities=21% Similarity=0.261 Sum_probs=38.0
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD 92 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~ 92 (320)
..++|++++|.|. |++|+++|+.|...|++|++.+|+.++.+.
T Consensus 147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~ 189 (287)
T TIGR02853 147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR 189 (287)
T ss_pred CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 4677999999999 779999999999999999999999876543
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >PLN02740 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.048 Score=51.12 Aligned_cols=80 Identities=21% Similarity=0.243 Sum_probs=53.2
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|++|+|.|+ |++|...++.+...|+ +|+.++++.++++.. +++ +.. ..+ |..+...+..+.+.+..++
T Consensus 198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a-~~~-----Ga~-~~i--~~~~~~~~~~~~v~~~~~~ 267 (381)
T PLN02740 198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKG-KEM-----GIT-DFI--NPKDSDKPVHERIREMTGG 267 (381)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH-HHc-----CCc-EEE--ecccccchHHHHHHHHhCC
Confidence 5899999986 9999999998888999 699999998876654 222 221 122 3222111233444444444
Q ss_pred CCeEEEEEccCC
Q 020854 131 LDVGVLINNVGI 142 (320)
Q Consensus 131 ~~id~lI~nAG~ 142 (320)
.+|+++.++|.
T Consensus 268 -g~dvvid~~G~ 278 (381)
T PLN02740 268 -GVDYSFECAGN 278 (381)
T ss_pred -CCCEEEECCCC
Confidence 57799998883
|
|
| >TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.052 Score=50.65 Aligned_cols=80 Identities=21% Similarity=0.207 Sum_probs=52.1
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|.+|+|+|+ |++|...++.+...|+ +|+.++++.++++.. +++ +.. . .+|..+...+..+.+.+..+.
T Consensus 185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~-----Ga~-~--~i~~~~~~~~~~~~v~~~~~~ 254 (368)
T TIGR02818 185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKL-----GAT-D--CVNPNDYDKPIQEVIVEITDG 254 (368)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh-----CCC-e--EEcccccchhHHHHHHHHhCC
Confidence 4899999985 9999999988888898 799999998876644 333 221 1 123222111233444443343
Q ss_pred CCeEEEEEccCC
Q 020854 131 LDVGVLINNVGI 142 (320)
Q Consensus 131 ~~id~lI~nAG~ 142 (320)
.+|++|.++|.
T Consensus 255 -g~d~vid~~G~ 265 (368)
T TIGR02818 255 -GVDYSFECIGN 265 (368)
T ss_pred -CCCEEEECCCC
Confidence 57799998873
|
The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols. |
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.043 Score=49.46 Aligned_cols=46 Identities=22% Similarity=0.246 Sum_probs=40.0
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV 93 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~ 93 (320)
..++.||.++|.|.|+-+|+.+|..|.++|++|+++.+....+++.
T Consensus 154 ~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~ 199 (301)
T PRK14194 154 CGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKAL 199 (301)
T ss_pred CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHH
Confidence 4567899999999999999999999999999999998776655443
|
|
| >cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.052 Score=49.41 Aligned_cols=78 Identities=19% Similarity=0.271 Sum_probs=51.6
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|..++|.|+++++|.++++.....|++|+.++++.++.+.. +++ +.. .. ++..+. +..+.+.+..+ .
T Consensus 139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~-~v--~~~~~~--~~~~~~~~~~~-~ 206 (329)
T cd08250 139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSL-----GCD-RP--INYKTE--DLGEVLKKEYP-K 206 (329)
T ss_pred CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHc-----CCc-eE--EeCCCc--cHHHHHHHhcC-C
Confidence 478999999999999999998888999999999888765544 222 221 11 222222 22233333333 3
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
.+|+++++.|
T Consensus 207 ~vd~v~~~~g 216 (329)
T cd08250 207 GVDVVYESVG 216 (329)
T ss_pred CCeEEEECCc
Confidence 5789998876
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.064 Score=45.51 Aligned_cols=65 Identities=18% Similarity=0.323 Sum_probs=50.1
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCC-------------------HHHHHHHHHHHHhhcCCceEEE
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRN-------------------PDKLKDVSDSIQAKYAKTQIKS 108 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~ 108 (320)
-++++++|+|.|+ ||+|.++++.|+..|. ++.++|.+ ..+.+.+++.+++.+|..++..
T Consensus 17 ~~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~ 95 (197)
T cd01492 17 KRLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSV 95 (197)
T ss_pred HHHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEE
Confidence 3466889999974 6699999999999997 68888754 1345667778888888888877
Q ss_pred EEEeCC
Q 020854 109 VVVDFS 114 (320)
Q Consensus 109 ~~~D~~ 114 (320)
....++
T Consensus 96 ~~~~~~ 101 (197)
T cd01492 96 DTDDIS 101 (197)
T ss_pred EecCcc
Confidence 765554
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >PRK06436 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.049 Score=49.47 Aligned_cols=92 Identities=15% Similarity=0.187 Sum_probs=55.1
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHH--HHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK--LKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 126 (320)
..++||++.|.|- |.||+++|+.+...|++|+..+|+... ......++.+......+..+.+-.+++.+..+. .+
T Consensus 118 ~~L~gktvgIiG~-G~IG~~vA~~l~afG~~V~~~~r~~~~~~~~~~~~~l~ell~~aDiv~~~lp~t~~T~~li~--~~ 194 (303)
T PRK06436 118 KLLYNKSLGILGY-GGIGRRVALLAKAFGMNIYAYTRSYVNDGISSIYMEPEDIMKKSDFVLISLPLTDETRGMIN--SK 194 (303)
T ss_pred CCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcccCcccccCCHHHHHhhCCEEEECCCCCchhhcCcC--HH
Confidence 3578999999986 889999999888889999999986421 111011222222245566666666654333332 22
Q ss_pred HHcCCCeEEEEEccCCC
Q 020854 127 AIEGLDVGVLINNVGIS 143 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~ 143 (320)
.+...+.+.++.|.|..
T Consensus 195 ~l~~mk~ga~lIN~sRG 211 (303)
T PRK06436 195 MLSLFRKGLAIINVARA 211 (303)
T ss_pred HHhcCCCCeEEEECCCc
Confidence 23333333566666543
|
|
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.071 Score=45.29 Aligned_cols=64 Identities=16% Similarity=0.238 Sum_probs=48.4
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCH---------------------HHHHHHHHHHHhhcCCceEE
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP---------------------DKLKDVSDSIQAKYAKTQIK 107 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~---------------------~~~~~~~~~l~~~~~~~~~~ 107 (320)
++++..|+|.|++ |+|.++++.|+..|. +++++|.+. .+.+...+.+++.+|..++.
T Consensus 16 ~L~~s~VlviG~g-glGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~ 94 (198)
T cd01485 16 KLRSAKVLIIGAG-ALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLS 94 (198)
T ss_pred HHhhCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEE
Confidence 4667889999775 499999999999997 688887541 23445667788888888887
Q ss_pred EEEEeCC
Q 020854 108 SVVVDFS 114 (320)
Q Consensus 108 ~~~~D~~ 114 (320)
.+.-+..
T Consensus 95 ~~~~~~~ 101 (198)
T cd01485 95 IVEEDSL 101 (198)
T ss_pred EEecccc
Confidence 7766654
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.053 Score=50.29 Aligned_cols=78 Identities=27% Similarity=0.389 Sum_probs=52.6
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLN-LVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~-Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|++|+|.|+ |++|...++.....|++ |+.++++.++.+.. +++ +.. .. +|..++ +..+.+.+..++
T Consensus 176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~-~~~-----Ga~-~~--i~~~~~--~~~~~i~~~~~~ 243 (358)
T TIGR03451 176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA-REF-----GAT-HT--VNSSGT--DPVEAIRALTGG 243 (358)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc-----CCc-eE--EcCCCc--CHHHHHHHHhCC
Confidence 4899999985 99999999888888985 88899988876544 222 221 11 233332 344555555554
Q ss_pred CCeEEEEEccC
Q 020854 131 LDVGVLINNVG 141 (320)
Q Consensus 131 ~~id~lI~nAG 141 (320)
..+|+++.++|
T Consensus 244 ~g~d~vid~~g 254 (358)
T TIGR03451 244 FGADVVIDAVG 254 (358)
T ss_pred CCCCEEEECCC
Confidence 45779998887
|
Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione. |
| >cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1 | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.043 Score=50.06 Aligned_cols=78 Identities=17% Similarity=0.304 Sum_probs=51.9
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
+++++++||++++|.+.++.....|++|+.++++.++.+...+ + +.. +.+ |..+. +..+++.+..++..
T Consensus 144 ~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~-~-----g~~-~~i--~~~~~--~~~~~v~~~~~~~~ 212 (324)
T cd08291 144 AKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKK-I-----GAE-YVL--NSSDP--DFLEDLKELIAKLN 212 (324)
T ss_pred CcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c-----CCc-EEE--ECCCc--cHHHHHHHHhCCCC
Confidence 4555566999999999988777889999999999877655432 2 221 122 22222 44455655555446
Q ss_pred eEEEEEccC
Q 020854 133 VGVLINNVG 141 (320)
Q Consensus 133 id~lI~nAG 141 (320)
+|+++.+.|
T Consensus 213 ~d~vid~~g 221 (324)
T cd08291 213 ATIFFDAVG 221 (324)
T ss_pred CcEEEECCC
Confidence 789998877
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin |
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.015 Score=51.47 Aligned_cols=73 Identities=14% Similarity=0.186 Sum_probs=48.5
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeE
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG 134 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 134 (320)
.++|+|||+- |+.++++|.++|++|+...++....+...+ .....+..+..|. +.+.+.+...++|
T Consensus 2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~--------~g~~~v~~g~l~~-----~~l~~~l~~~~i~ 67 (256)
T TIGR00715 2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI--------HQALTVHTGALDP-----QELREFLKRHSID 67 (256)
T ss_pred eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc--------cCCceEEECCCCH-----HHHHHHHHhcCCC
Confidence 6899999997 999999999999999999988765332211 1112233444433 2244444555677
Q ss_pred EEEEccC
Q 020854 135 VLINNVG 141 (320)
Q Consensus 135 ~lI~nAG 141 (320)
+||..+.
T Consensus 68 ~VIDAtH 74 (256)
T TIGR00715 68 ILVDATH 74 (256)
T ss_pred EEEEcCC
Confidence 8887765
|
This enzyme was found to be a monomer by gel filtration. |
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.062 Score=52.40 Aligned_cols=46 Identities=22% Similarity=0.439 Sum_probs=40.8
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSI 97 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l 97 (320)
+.++.++|.|+ |++|..+++.|...|+ +|++++|+.++.+.+.+++
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~ 310 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF 310 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh
Confidence 56899999999 9999999999999997 7999999999887776654
|
|
| >cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.066 Score=49.08 Aligned_cols=79 Identities=22% Similarity=0.376 Sum_probs=55.3
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|.+++|.|+++++|.++++.+.+.|++|+.+++++++.+.. +++ +.. .. ++..+. +..+++.+..++.
T Consensus 165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~-~v--~~~~~~--~~~~~~~~~~~~~ 233 (341)
T cd08297 165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA-KEL-----GAD-AF--VDFKKS--DDVEAVKELTGGG 233 (341)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHc-----CCc-EE--EcCCCc--cHHHHHHHHhcCC
Confidence 478999999999999999999999999999999998775543 333 211 11 222222 4455666555555
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
.+|+++++.|
T Consensus 234 ~vd~vl~~~~ 243 (341)
T cd08297 234 GAHAVVVTAV 243 (341)
T ss_pred CCCEEEEcCC
Confidence 6789998665
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha |
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.074 Score=46.32 Aligned_cols=64 Identities=19% Similarity=0.283 Sum_probs=44.6
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHH--------------------HHHHHHHHHHhhcCCceEE
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPD--------------------KLKDVSDSIQAKYAKTQIK 107 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~--------------------~~~~~~~~l~~~~~~~~~~ 107 (320)
-++++++|+|.|+ ||+|.++++.|+..|. +++++|.+.- +.+...+.+++.+++..+.
T Consensus 23 ~~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~ 101 (231)
T PRK08328 23 EKLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIE 101 (231)
T ss_pred HHHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEE
Confidence 3467888999976 6999999999999997 7888886431 2222234455666666666
Q ss_pred EEEEeC
Q 020854 108 SVVVDF 113 (320)
Q Consensus 108 ~~~~D~ 113 (320)
.+...+
T Consensus 102 ~~~~~~ 107 (231)
T PRK08328 102 TFVGRL 107 (231)
T ss_pred EEeccC
Confidence 655544
|
|
| >cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.073 Score=47.95 Aligned_cols=76 Identities=20% Similarity=0.299 Sum_probs=51.8
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|.+++|.|+++++|.++++.....|++|+.++++.++.+.. .++ +.. ..+. + .+ +..+.+.+. +.
T Consensus 142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~-~~~~-~-~~---~~~~~i~~~--~~ 207 (320)
T cd08243 142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-KEL-----GAD-EVVI-D-DG---AIAEQLRAA--PG 207 (320)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hhc-----CCc-EEEe-c-Cc---cHHHHHHHh--CC
Confidence 479999999999999999999999999999999888765443 222 221 1111 1 21 233344433 33
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
++|+++++.|
T Consensus 208 ~~d~vl~~~~ 217 (320)
T cd08243 208 GFDKVLELVG 217 (320)
T ss_pred CceEEEECCC
Confidence 6889998876
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.053 Score=51.71 Aligned_cols=46 Identities=22% Similarity=0.441 Sum_probs=40.1
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSI 97 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l 97 (320)
+.|++++|.|+ |++|..+++.|...|+ +|++++|+.++.++.++++
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~ 226 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF 226 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc
Confidence 56899999987 9999999999999997 7999999998877666554
|
|
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.033 Score=50.01 Aligned_cols=43 Identities=23% Similarity=0.383 Sum_probs=37.1
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKL 90 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~ 90 (320)
...+.||.|+|.|+|+-.|++++..|.++|++|+++.|....+
T Consensus 154 ~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~~L 196 (283)
T PRK14192 154 NIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQNL 196 (283)
T ss_pred CCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCchhH
Confidence 3467799999999999999999999999999999998854433
|
|
| >PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.03 Score=46.81 Aligned_cols=44 Identities=25% Similarity=0.467 Sum_probs=36.3
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHh
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQA 99 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~ 99 (320)
+|.|.|| |-+|+.+|..++..|++|++.+++.+.+++..+.+..
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~ 44 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIER 44 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHH
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHH
Confidence 3678888 9999999999999999999999999988777666644
|
1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B .... |
| >PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.077 Score=48.27 Aligned_cols=79 Identities=20% Similarity=0.253 Sum_probs=54.7
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|.+++|.||++++|.++++..-..|++|+.++++.++.+.. +++ +.. .. ++..+. +..+.+.+..++.
T Consensus 140 ~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~-~~~-----g~~-~~--~~~~~~--~~~~~~~~~~~~~ 208 (327)
T PRK10754 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRA-KKA-----GAW-QV--INYREE--NIVERVKEITGGK 208 (327)
T ss_pred CCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHC-----CCC-EE--EcCCCC--cHHHHHHHHcCCC
Confidence 579999999999999999988888999999999888775543 222 221 12 222222 3445555555555
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
.+|+++++.|
T Consensus 209 ~~d~vl~~~~ 218 (327)
T PRK10754 209 KVRVVYDSVG 218 (327)
T ss_pred CeEEEEECCc
Confidence 6889998776
|
|
| >PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.025 Score=54.23 Aligned_cols=77 Identities=18% Similarity=0.245 Sum_probs=54.5
Q ss_pred cCCCEEEEECC----------------CCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCC
Q 020854 51 KYGSWALVTGP----------------TDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114 (320)
Q Consensus 51 ~~gk~vlITGa----------------s~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~ 114 (320)
++||.||||+| ||-.|.++|+++..+|++|++++-... +. +...+..+.++-.
T Consensus 254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~~----------~p~~v~~i~V~ta 322 (475)
T PRK13982 254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-LA----------DPQGVKVIHVESA 322 (475)
T ss_pred cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-CC----------CCCCceEEEecCH
Confidence 67999999995 578999999999999999999874332 10 1233555555432
Q ss_pred CCcHHHHHHHHHHHcCCCeEEEEEccCCCC
Q 020854 115 GDLDEGVERIKEAIEGLDVGVLINNVGISY 144 (320)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~id~lI~nAG~~~ 144 (320)
++..+.+.+.++ .|++|.+|++..
T Consensus 323 ---~eM~~av~~~~~---~Di~I~aAAVaD 346 (475)
T PRK13982 323 ---RQMLAAVEAALP---ADIAIFAAAVAD 346 (475)
T ss_pred ---HHHHHHHHhhCC---CCEEEEeccccc
Confidence 355566666554 359999999854
|
|
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.086 Score=48.29 Aligned_cols=120 Identities=13% Similarity=0.144 Sum_probs=69.3
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcC-CeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G-~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
+.+.+.|+|| |.+|..++..++..| ..|+++|.+++.++...-++.......... ...-.+++ .. .+..
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~-~~i~~~~d-------~~-~l~~ 73 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSN-INILGTNN-------YE-DIKD 73 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCC-eEEEeCCC-------HH-HhCC
Confidence 4678999997 889999999999988 689999999876553333332110000000 01111111 11 3343
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCcc
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGA 195 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~ 195 (320)
-|++|..+|.... + ..+. .+.+..|. .+.+.+.+.+.+.. ++.++++|--.
T Consensus 74 --ADiVVitag~~~~---~--g~~r---~dll~~n~----~i~~~i~~~i~~~~p~a~vivvsNP~ 125 (319)
T PTZ00117 74 --SDVVVITAGVQRK---E--EMTR---EDLLTING----KIMKSVAESVKKYCPNAFVICVTNPL 125 (319)
T ss_pred --CCEEEECCCCCCC---C--CCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecChH
Confidence 3499999987532 1 2232 34455665 45566666665443 56677776533
|
|
| >TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.057 Score=49.91 Aligned_cols=41 Identities=24% Similarity=0.458 Sum_probs=36.4
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV 93 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~ 93 (320)
.|++|+|.|+ |++|...++.+...|++|+.+++++++++..
T Consensus 166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~ 206 (349)
T TIGR03201 166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM 206 (349)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence 4899999999 9999999999888999999999998887644
|
Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. |
| >cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.074 Score=49.08 Aligned_cols=79 Identities=22% Similarity=0.303 Sum_probs=54.2
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|++++|+|+ +++|...++.+...|+ +|+.++++.++.+.. .++ +... .+|..+. +..+++.+..++
T Consensus 172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~~-----ga~~---~i~~~~~--~~~~~l~~~~~~ 239 (351)
T cd08233 172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA-EEL-----GATI---VLDPTEV--DVVAEVRKLTGG 239 (351)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh-----CCCE---EECCCcc--CHHHHHHHHhCC
Confidence 4899999985 8999999999999999 788888888876543 222 2211 1233332 344556555554
Q ss_pred CCeEEEEEccCC
Q 020854 131 LDVGVLINNVGI 142 (320)
Q Consensus 131 ~~id~lI~nAG~ 142 (320)
..+|+++.++|.
T Consensus 240 ~~~d~vid~~g~ 251 (351)
T cd08233 240 GGVDVSFDCAGV 251 (351)
T ss_pred CCCCEEEECCCC
Confidence 457899999873
|
(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. |
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.084 Score=49.52 Aligned_cols=89 Identities=11% Similarity=0.111 Sum_probs=54.5
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-------HHHHHhhcCCceEEEEEEeCCCCcHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV-------SDSIQAKYAKTQIKSVVVDFSGDLDEGVE 122 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~-------~~~l~~~~~~~~~~~~~~D~~~~~~~~~~ 122 (320)
.+.||++.|.|- |.||+++|+.|...|++|+..+|+....+.. ..++.+......+..+.+-++.+.+..++
T Consensus 189 ~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~ 267 (385)
T PRK07574 189 DLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTYHVSFDSLVSVCDVVTIHCPLHPETEHLFD 267 (385)
T ss_pred ecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCceecCCHHHHhhcCCEEEEcCCCCHHHHHHhC
Confidence 478999999987 6799999999999999999999875211100 11222222355677776666654444442
Q ss_pred HHHHHHcCCCeEEEEEccC
Q 020854 123 RIKEAIEGLDVGVLINNVG 141 (320)
Q Consensus 123 ~~~~~~~~~~id~lI~nAG 141 (320)
.+.+...+.+.++-|.|
T Consensus 268 --~~~l~~mk~ga~lIN~a 284 (385)
T PRK07574 268 --ADVLSRMKRGSYLVNTA 284 (385)
T ss_pred --HHHHhcCCCCcEEEECC
Confidence 12233333334444544
|
|
| >cd08300 alcohol_DH_class_III class III alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.078 Score=49.39 Aligned_cols=79 Identities=19% Similarity=0.231 Sum_probs=52.2
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|.+|+|.|+ +++|...++.+...|+ +|+.++++.++++.. +++ +.. .. .|..+..++..+.+.+..++
T Consensus 186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~l-----Ga~-~~--i~~~~~~~~~~~~v~~~~~~ 255 (368)
T cd08300 186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKF-----GAT-DC--VNPKDHDKPIQQVLVEMTDG 255 (368)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc-----CCC-EE--EcccccchHHHHHHHHHhCC
Confidence 4899999975 8999999999888999 699999998886643 333 221 11 22222111233444443343
Q ss_pred CCeEEEEEccC
Q 020854 131 LDVGVLINNVG 141 (320)
Q Consensus 131 ~~id~lI~nAG 141 (320)
.+|+++.+.|
T Consensus 256 -g~d~vid~~g 265 (368)
T cd08300 256 -GVDYTFECIG 265 (368)
T ss_pred -CCcEEEECCC
Confidence 5779999877
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim |
| >PRK08410 2-hydroxyacid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.066 Score=48.83 Aligned_cols=89 Identities=17% Similarity=0.157 Sum_probs=55.3
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHH--HHHHHhhcCCceEEEEEEeCCCCcHHHH-HHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV--SDSIQAKYAKTQIKSVVVDFSGDLDEGV-ERIKE 126 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~--~~~l~~~~~~~~~~~~~~D~~~~~~~~~-~~~~~ 126 (320)
.++||++.|.|- |.||+++|+.+...|.+|+..+|.....+.. ..++.+......+..+.+-++++-+..+ ++..+
T Consensus 142 ~L~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~~~~~~~~~~~~~l~ell~~sDvv~lh~Plt~~T~~li~~~~~~ 220 (311)
T PRK08410 142 EIKGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTSGKNKNEEYERVSLEELLKTSDIISIHAPLNEKTKNLIAYKELK 220 (311)
T ss_pred ccCCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCCccccccCceeecHHHHhhcCCEEEEeCCCCchhhcccCHHHHH
Confidence 478999999986 8999999999999999999999853211100 0112222224567777777776533333 33333
Q ss_pred HHcCCCeEEEEEccCC
Q 020854 127 AIEGLDVGVLINNVGI 142 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~ 142 (320)
..+ .+.++-|.|-
T Consensus 221 ~Mk---~~a~lIN~aR 233 (311)
T PRK08410 221 LLK---DGAILINVGR 233 (311)
T ss_pred hCC---CCeEEEECCC
Confidence 333 3355555553
|
|
| >cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.071 Score=50.55 Aligned_cols=87 Identities=14% Similarity=0.066 Sum_probs=52.5
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC---eEEEEeCCHHHHHHHHHHHHhhc--CCceEEEEEEeCCCCcHHHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL---NLVLVGRNPDKLKDVSDSIQAKY--AKTQIKSVVVDFSGDLDEGVERIKE 126 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~---~Vil~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~ 126 (320)
.|.+|+|.||+|++|...++.+...|+ +|+.++++.++++...+.+.... .+.... ..|..+. .+..+.+.+
T Consensus 175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~--~i~~~~~-~~~~~~v~~ 251 (410)
T cd08238 175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELL--YVNPATI-DDLHATLME 251 (410)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEE--EECCCcc-ccHHHHHHH
Confidence 478999999999999998877666553 79999999988775443211000 011111 1232221 133344444
Q ss_pred HHcCCCeEEEEEccC
Q 020854 127 AIEGLDVGVLINNVG 141 (320)
Q Consensus 127 ~~~~~~id~lI~nAG 141 (320)
..+...+|++|.++|
T Consensus 252 ~t~g~g~D~vid~~g 266 (410)
T cd08238 252 LTGGQGFDDVFVFVP 266 (410)
T ss_pred HhCCCCCCEEEEcCC
Confidence 444445778888776
|
L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found |
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.17 Score=48.22 Aligned_cols=115 Identities=14% Similarity=0.162 Sum_probs=73.0
Q ss_pred CEEEEECCCCcHHHHHHHHHHHc-------CC--eEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEEEeCCCCcHHHHHH
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKT-------GL--NLVLVGRNPDKLKDVSDSIQAKY-AKTQIKSVVVDFSGDLDEGVER 123 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~-------G~--~Vil~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~D~~~~~~~~~~~ 123 (320)
-.|.|+|++|.+|.++|..|+.. |. +++++++++++++..+-++.... +-.. .+.+...
T Consensus 101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~----~v~i~~~------- 169 (444)
T PLN00112 101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLR----EVSIGID------- 169 (444)
T ss_pred eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcC----ceEEecC-------
Confidence 46899999999999999999988 64 79999999999988887776532 1110 1111111
Q ss_pred HHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhc--CCCcEEEEEcC
Q 020854 124 IKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK--RKKGAIVNIGS 193 (320)
Q Consensus 124 ~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~--~~~g~Iv~vsS 193 (320)
-.+.+.. -|++|..||... ++ ..+. .+.++.|.. +++...+.+.+ .+.+.||++|-
T Consensus 170 ~ye~~kd--aDiVVitAG~pr---kp--G~tR---~dLl~~N~~----I~k~i~~~I~~~a~p~~ivIVVsN 227 (444)
T PLN00112 170 PYEVFQD--AEWALLIGAKPR---GP--GMER---ADLLDINGQ----IFAEQGKALNEVASRNVKVIVVGN 227 (444)
T ss_pred CHHHhCc--CCEEEECCCCCC---CC--CCCH---HHHHHHHHH----HHHHHHHHHHHhcCCCeEEEEcCC
Confidence 0223343 449999999743 22 2333 334455544 45555555655 45677777764
|
|
| >PRK06487 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.044 Score=50.11 Aligned_cols=89 Identities=10% Similarity=0.067 Sum_probs=54.3
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHH-HHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGV-ERIKEAI 128 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~-~~~~~~~ 128 (320)
.+.||++.|.|- |.||+++|+.+...|++|+..+|..........++.+......+..+.+-++++-+..+ ++..+..
T Consensus 145 ~l~gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~~~~~~~~~~~l~ell~~sDiv~l~lPlt~~T~~li~~~~~~~m 223 (317)
T PRK06487 145 ELEGKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLPGRPARPDRLPLDELLPQVDALTLHCPLTEHTRHLIGARELALM 223 (317)
T ss_pred ccCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCCcccccccCHHHHHHhCCEEEECCCCChHHhcCcCHHHHhcC
Confidence 478999999997 99999999999999999999887532100000112222224567777776665432332 2333333
Q ss_pred cCCCeEEEEEccCC
Q 020854 129 EGLDVGVLINNVGI 142 (320)
Q Consensus 129 ~~~~id~lI~nAG~ 142 (320)
+.+.++-|.|-
T Consensus 224 ---k~ga~lIN~aR 234 (317)
T PRK06487 224 ---KPGALLINTAR 234 (317)
T ss_pred ---CCCeEEEECCC
Confidence 33356666653
|
|
| >PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.11 Score=40.49 Aligned_cols=92 Identities=29% Similarity=0.407 Sum_probs=63.5
Q ss_pred cHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeEEEEEccCCC
Q 020854 64 GIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGIS 143 (320)
Q Consensus 64 GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lI~nAG~~ 143 (320)
|||...++-+...|++|+.+++++++.+.+. ++ +. ...+|..+. +..+++.+..+...+|++|.++|..
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~-~~-----Ga---~~~~~~~~~--~~~~~i~~~~~~~~~d~vid~~g~~ 69 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAK-EL-----GA---DHVIDYSDD--DFVEQIRELTGGRGVDVVIDCVGSG 69 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HT-----TE---SEEEETTTS--SHHHHHHHHTTTSSEEEEEESSSSH
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHHH-hh-----cc---ccccccccc--ccccccccccccccceEEEEecCcH
Confidence 6899999999999999999999998865432 22 21 122455544 4667777777766799999999831
Q ss_pred CCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcc
Q 020854 144 YPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGA 195 (320)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~ 195 (320)
+.+ +..+..+ ++.|+++.++...
T Consensus 70 ------------~~~---------------~~~~~~l--~~~G~~v~vg~~~ 92 (130)
T PF00107_consen 70 ------------DTL---------------QEAIKLL--RPGGRIVVVGVYG 92 (130)
T ss_dssp ------------HHH---------------HHHHHHE--EEEEEEEEESSTS
T ss_pred ------------HHH---------------HHHHHHh--ccCCEEEEEEccC
Confidence 111 2333334 4569999998876
|
1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: |
| >cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.076 Score=49.56 Aligned_cols=78 Identities=26% Similarity=0.328 Sum_probs=52.2
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|++|+|+|+ +++|...++.+...|+ +|+.+++++++++.. +++ +.. . .+|..++ +..+++.+..+.
T Consensus 191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~-----Ga~-~--~i~~~~~--~~~~~i~~~~~~ 258 (371)
T cd08281 191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-REL-----GAT-A--TVNAGDP--NAVEQVRELTGG 258 (371)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHc-----CCc-e--EeCCCch--hHHHHHHHHhCC
Confidence 4889999985 8999998888888899 699999988876543 333 221 1 1222222 444555554444
Q ss_pred CCeEEEEEccCC
Q 020854 131 LDVGVLINNVGI 142 (320)
Q Consensus 131 ~~id~lI~nAG~ 142 (320)
.+|++|.++|.
T Consensus 259 -g~d~vid~~G~ 269 (371)
T cd08281 259 -GVDYAFEMAGS 269 (371)
T ss_pred -CCCEEEECCCC
Confidence 57799988873
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd |
| >PLN03139 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.11 Score=48.85 Aligned_cols=90 Identities=20% Similarity=0.208 Sum_probs=55.0
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHH---HH----HHHHHhhcCCceEEEEEEeCCCCcHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK---DV----SDSIQAKYAKTQIKSVVVDFSGDLDEGVE 122 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~---~~----~~~l~~~~~~~~~~~~~~D~~~~~~~~~~ 122 (320)
.+.||++.|.| .|.||+++|+.|...|++|+..+|+....+ +. .+++.+..+...+..+.+-.+++.+..+.
T Consensus 196 ~L~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~sDvV~l~lPlt~~T~~li~ 274 (386)
T PLN03139 196 DLEGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFEEDLDAMLPKCDVVVINTPLTEKTRGMFN 274 (386)
T ss_pred CCCCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceecCCHHHHHhhCCEEEEeCCCCHHHHHHhC
Confidence 47899999999 588999999999999999999998642111 10 11222222345666666665554444442
Q ss_pred HHHHHHcCCCeEEEEEccCC
Q 020854 123 RIKEAIEGLDVGVLINNVGI 142 (320)
Q Consensus 123 ~~~~~~~~~~id~lI~nAG~ 142 (320)
.+.+...+.+.++-|.|-
T Consensus 275 --~~~l~~mk~ga~lIN~aR 292 (386)
T PLN03139 275 --KERIAKMKKGVLIVNNAR 292 (386)
T ss_pred --HHHHhhCCCCeEEEECCC
Confidence 123444433455555553
|
|
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.066 Score=51.26 Aligned_cols=41 Identities=37% Similarity=0.615 Sum_probs=35.6
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSD 95 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~ 95 (320)
++.|.||+|++|.++++.|.+.|++|++++|+.+...+...
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~ 42 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAK 42 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHH
Confidence 58999999999999999999999999999999877544433
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.088 Score=47.67 Aligned_cols=42 Identities=29% Similarity=0.324 Sum_probs=36.7
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK 91 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~ 91 (320)
..+.|++++|.|. |++|+++++.|...|++|++++|+.++.+
T Consensus 148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~ 189 (296)
T PRK08306 148 ITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLA 189 (296)
T ss_pred CCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 3456999999997 77999999999999999999999976543
|
|
| >cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH) | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.081 Score=49.01 Aligned_cols=81 Identities=15% Similarity=0.259 Sum_probs=52.3
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC-cHHHHHHHHHHHc
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD-LDEGVERIKEAIE 129 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~ 129 (320)
.|++++|+| ++++|.++++.+...|+ +|+.+++++++.+.+ +++ +.. ..+ |..+. ..+..+.+.+..+
T Consensus 177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~-~~~-----g~~-~vi--~~~~~~~~~~~~~i~~~~~ 246 (361)
T cd08231 177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELA-REF-----GAD-ATI--DIDELPDPQRRAIVRDITG 246 (361)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc-----CCC-eEE--cCcccccHHHHHHHHHHhC
Confidence 589999997 59999999988888999 899999888765433 222 221 111 22211 1122234555455
Q ss_pred CCCeEEEEEccCC
Q 020854 130 GLDVGVLINNVGI 142 (320)
Q Consensus 130 ~~~id~lI~nAG~ 142 (320)
...+|+++.+.|.
T Consensus 247 ~~~~d~vid~~g~ 259 (361)
T cd08231 247 GRGADVVIEASGH 259 (361)
T ss_pred CCCCcEEEECCCC
Confidence 4467899998873
|
This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino |
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.033 Score=49.93 Aligned_cols=44 Identities=14% Similarity=0.262 Sum_probs=38.5
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK 91 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~ 91 (320)
..++.||.++|+|.|.-+|+.++..|.++|++|+++.+...++.
T Consensus 153 ~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l~ 196 (286)
T PRK14175 153 DIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDMA 196 (286)
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHH
Confidence 34677999999999999999999999999999999988765443
|
|
| >cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.078 Score=48.14 Aligned_cols=42 Identities=31% Similarity=0.311 Sum_probs=37.1
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV 93 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~ 93 (320)
.|++++|.|+++++|.++++...+.|++|+.+++++++.+..
T Consensus 146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~ 187 (326)
T cd08289 146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL 187 (326)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence 368999999999999999999999999999999998876544
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH |
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.12 Score=48.59 Aligned_cols=87 Identities=20% Similarity=0.371 Sum_probs=61.3
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcC-CeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G-~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
+++++++|.|+ |-+|.-+|++|+++| .+|+++.|+.++.+++++++. . .+ -.++++.+.+.
T Consensus 176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~-----~--~~----------~~l~el~~~l~ 237 (414)
T COG0373 176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG-----A--EA----------VALEELLEALA 237 (414)
T ss_pred cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC-----C--ee----------ecHHHHHHhhh
Confidence 67999999998 559999999999999 489999999999998888773 1 11 12245555556
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHH
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIK 163 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~ 163 (320)
..| +||...|...+ -++.+.++..+.
T Consensus 238 ~~D--vVissTsa~~~------ii~~~~ve~a~~ 263 (414)
T COG0373 238 EAD--VVISSTSAPHP------IITREMVERALK 263 (414)
T ss_pred hCC--EEEEecCCCcc------ccCHHHHHHHHh
Confidence 545 88877764332 345555554433
|
|
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.037 Score=47.78 Aligned_cols=43 Identities=28% Similarity=0.422 Sum_probs=38.0
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHH
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI 97 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l 97 (320)
.+.|.||+|.+|.++++.|++.|++|++.+|+.++.++..+..
T Consensus 2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~ 44 (219)
T TIGR01915 2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKA 44 (219)
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHH
Confidence 4789999999999999999999999999999998877766544
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.068 Score=46.36 Aligned_cols=74 Identities=20% Similarity=0.386 Sum_probs=53.2
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeE
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG 134 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 134 (320)
.++|.| .|-+|..+|+.|.+.|++|++++++++..++..++ ....+.+..|-++. ++.++.+-.+.|
T Consensus 2 ~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~------~~~~~~v~gd~t~~------~~L~~agi~~aD 68 (225)
T COG0569 2 KIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD------ELDTHVVIGDATDE------DVLEEAGIDDAD 68 (225)
T ss_pred EEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh------hcceEEEEecCCCH------HHHHhcCCCcCC
Confidence 355555 47899999999999999999999999987764331 23467777887764 444455554566
Q ss_pred EEEEccC
Q 020854 135 VLINNVG 141 (320)
Q Consensus 135 ~lI~nAG 141 (320)
++|...|
T Consensus 69 ~vva~t~ 75 (225)
T COG0569 69 AVVAATG 75 (225)
T ss_pred EEEEeeC
Confidence 7776655
|
|
| >TIGR01751 crot-CoA-red crotonyl-CoA reductase | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.095 Score=49.42 Aligned_cols=41 Identities=27% Similarity=0.279 Sum_probs=35.5
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD 92 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~ 92 (320)
.|.+++|+|+++++|.++++.+...|++++.++++.++.+.
T Consensus 189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~ 229 (398)
T TIGR01751 189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEY 229 (398)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHH
Confidence 47899999999999999998888899999888888766543
|
The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. |
| >PRK12550 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.034 Score=49.66 Aligned_cols=44 Identities=23% Similarity=0.338 Sum_probs=38.1
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSI 97 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l 97 (320)
++.++|.|+ ||-+++++..|++.|+ +|.+++|+.++.+++++++
T Consensus 122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~ 166 (272)
T PRK12550 122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY 166 (272)
T ss_pred CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence 468899886 9999999999999998 5999999999887776644
|
|
| >PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.021 Score=46.70 Aligned_cols=46 Identities=20% Similarity=0.402 Sum_probs=35.7
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV 93 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~ 93 (320)
..+++||.++|.|.|.-+|+.++..|.++|+.|.++..+.+.+++.
T Consensus 31 ~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~ 76 (160)
T PF02882_consen 31 GIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEI 76 (160)
T ss_dssp T-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHH
T ss_pred CCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccce
Confidence 3457899999999999999999999999999999998877655543
|
Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A .... |
| >cd08246 crotonyl_coA_red crotonyl-CoA reductase | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.11 Score=48.82 Aligned_cols=42 Identities=24% Similarity=0.247 Sum_probs=36.7
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV 93 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~ 93 (320)
.|.+++|+|+++++|.++++.....|++++.++++.++.+..
T Consensus 193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~ 234 (393)
T cd08246 193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYC 234 (393)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence 478999999999999999988888999999888888776544
|
Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma |
| >cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3 | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.091 Score=47.29 Aligned_cols=59 Identities=17% Similarity=0.298 Sum_probs=46.8
Q ss_pred EEEECCCCcHHHHHHHHHHHcCC-eEEEEeCC-------------------HHHHHHHHHHHHhhcCCceEEEEEEeCCC
Q 020854 56 ALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRN-------------------PDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115 (320)
Q Consensus 56 vlITGas~GIG~ala~~l~~~G~-~Vil~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~D~~~ 115 (320)
|+|.| .||+|.++++.|+..|. ++.++|.+ ..|.+.+++.+++.+++.++..+..++.+
T Consensus 2 VlVVG-aGGlG~eilknLal~Gvg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np~v~I~~~~~~i~~ 80 (291)
T cd01488 2 ILVIG-AGGLGCELLKNLALSGFRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVPGVNVTPHFGKIQD 80 (291)
T ss_pred EEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCCCCEEEEEecccCc
Confidence 66776 68999999999999997 78887753 24566677778888888888888777764
|
UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.15 Score=46.75 Aligned_cols=114 Identities=21% Similarity=0.239 Sum_probs=67.5
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCC-------eEEEEeCCH--HHHHHHHHHHHhhc-CCceEEEEEEeCCCCcHHHHHH
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGL-------NLVLVGRNP--DKLKDVSDSIQAKY-AKTQIKSVVVDFSGDLDEGVER 123 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~-------~Vil~~r~~--~~~~~~~~~l~~~~-~~~~~~~~~~D~~~~~~~~~~~ 123 (320)
-.|.|+|++|++|..++..|...|. ++++.|.++ ++++..+.++.... +... ... +. ..
T Consensus 4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~--~~~--i~-------~~ 72 (323)
T TIGR01759 4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLA--GVV--AT-------TD 72 (323)
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccC--CcE--Ee-------cC
Confidence 3589999999999999999998884 699999965 44666666664321 1000 000 11 01
Q ss_pred HHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC-C-CcEEEEEc
Q 020854 124 IKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-K-KGAIVNIG 192 (320)
Q Consensus 124 ~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-~-~g~Iv~vs 192 (320)
-.+.+.. -|++|..||... ++ ..+. .+.++.|.. +++.+.+.+.+. + ++.|+++|
T Consensus 73 ~~~~~~d--aDvVVitAG~~~---k~--g~tR---~dll~~Na~----i~~~i~~~i~~~~~~~~iiivvs 129 (323)
T TIGR01759 73 PEEAFKD--VDAALLVGAFPR---KP--GMER---ADLLSKNGK----IFKEQGKALNKVAKKDVKVLVVG 129 (323)
T ss_pred hHHHhCC--CCEEEEeCCCCC---CC--CCcH---HHHHHHHHH----HHHHHHHHHHhhCCCCeEEEEeC
Confidence 1233343 449999999743 22 2333 334555554 445555555544 3 56777775
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.073 Score=48.51 Aligned_cols=115 Identities=18% Similarity=0.311 Sum_probs=65.8
Q ss_pred EEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCe
Q 020854 56 ALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV 133 (320)
Q Consensus 56 vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 133 (320)
|.|+|++|.+|.++|..|+..|. +++++|+++ .+..+.++.......++... . .+ ++..+.+.. -
T Consensus 2 V~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~~~~~~i~~~--~-~~------~~~~~~~~d--a 68 (312)
T TIGR01772 2 VAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHIPTAASVKGF--S-GE------EGLENALKG--A 68 (312)
T ss_pred EEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcCCcCceEEEe--c-CC------CchHHHcCC--C
Confidence 78999999999999999998875 799999987 22222223221100111110 0 00 012334444 4
Q ss_pred EEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC-CCcEEEEEcCcc
Q 020854 134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSGA 195 (320)
Q Consensus 134 d~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-~~g~Iv~vsS~~ 195 (320)
|++|..||.... + ..+. .+.+..|+. +++...+.+.+. +++.|+++|--.
T Consensus 69 DivvitaG~~~~---~--g~~R---~dll~~N~~----I~~~i~~~i~~~~p~~iiivvsNPv 119 (312)
T TIGR01772 69 DVVVIPAGVPRK---P--GMTR---DDLFNVNAG----IVKDLVAAVAESCPKAMILVITNPV 119 (312)
T ss_pred CEEEEeCCCCCC---C--CccH---HHHHHHhHH----HHHHHHHHHHHhCCCeEEEEecCch
Confidence 499999997432 2 2232 334566665 555555555544 467777776644
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.14 Score=46.47 Aligned_cols=116 Identities=22% Similarity=0.342 Sum_probs=67.7
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
+.|.|+|+ |++|.++|..|+.++. .+++.+.+++..+..+.++....+ .......+..+ .. .+.+..
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~---~~~~~~~i~~~-----~~-y~~~~~- 69 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAA---PLGSDVKITGD-----GD-YEDLKG- 69 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcch---hccCceEEecC-----CC-hhhhcC-
Confidence 35889999 9999999999988874 799999997776666666643211 11111111110 00 222333
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcC
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGS 193 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS 193 (320)
-|++|..||.... | .++. .+.++.|..=.-.+.+. +.+.. ++.++.+|-
T Consensus 70 -aDiVvitAG~prK---p--GmtR---~DLl~~Na~I~~~i~~~----i~~~~~d~ivlVvtN 119 (313)
T COG0039 70 -ADIVVITAGVPRK---P--GMTR---LDLLEKNAKIVKDIAKA----IAKYAPDAIVLVVTN 119 (313)
T ss_pred -CCEEEEeCCCCCC---C--CCCH---HHHHHhhHHHHHHHHHH----HHhhCCCeEEEEecC
Confidence 4499999997653 2 2344 34456666544444444 44333 466666654
|
|
| >PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.25 Score=40.34 Aligned_cols=45 Identities=24% Similarity=0.313 Sum_probs=33.5
Q ss_pred cccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Q 020854 47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD 92 (320)
Q Consensus 47 ~~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~ 92 (320)
.++.+.||+++|.| -|-+|+.+|+.|...|++|++++.++-+.-+
T Consensus 17 t~~~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alq 61 (162)
T PF00670_consen 17 TNLMLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQ 61 (162)
T ss_dssp H-S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHH
T ss_pred CceeeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHH
Confidence 45668899999997 5889999999999999999999999866443
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C .... |
| >PRK07411 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.1 Score=49.17 Aligned_cols=65 Identities=20% Similarity=0.301 Sum_probs=51.4
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCC-------------------HHHHHHHHHHHHhhcCCceEEEE
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRN-------------------PDKLKDVSDSIQAKYAKTQIKSV 109 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~ 109 (320)
+++..+|+|.|+ ||+|..+++.|+..|. +++++|.+ ..|.+..++.+++.++..++..+
T Consensus 35 ~L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~ 113 (390)
T PRK07411 35 RLKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLY 113 (390)
T ss_pred HHhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEE
Confidence 467889999976 6999999999999997 78888763 23566778888888888888877
Q ss_pred EEeCCC
Q 020854 110 VVDFSG 115 (320)
Q Consensus 110 ~~D~~~ 115 (320)
...+++
T Consensus 114 ~~~~~~ 119 (390)
T PRK07411 114 ETRLSS 119 (390)
T ss_pred ecccCH
Confidence 765553
|
|
| >PLN02494 adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.15 Score=48.76 Aligned_cols=42 Identities=19% Similarity=0.300 Sum_probs=36.4
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKL 90 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~ 90 (320)
+..+.||+++|.|.. .||+.+|+.+...|++|+++++++.+.
T Consensus 249 ~i~LaGKtVvViGyG-~IGr~vA~~aka~Ga~VIV~e~dp~r~ 290 (477)
T PLN02494 249 DVMIAGKVAVICGYG-DVGKGCAAAMKAAGARVIVTEIDPICA 290 (477)
T ss_pred CCccCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhh
Confidence 344679999999986 999999999999999999999987653
|
|
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.5 Score=43.14 Aligned_cols=115 Identities=22% Similarity=0.302 Sum_probs=69.7
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
..+.|+|+ |.+|.++|..|+..|. ++++++.+++.++..+.++....+-.... .+-.+.+ . +.+.
T Consensus 4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~--~v~~~~d-------y-~~~~-- 70 (312)
T cd05293 4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNP--KIEADKD-------Y-SVTA-- 70 (312)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCC--EEEECCC-------H-HHhC--
Confidence 46889996 9999999999998874 69999999988777777775432111100 1111111 1 1233
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC-CCcEEEEEcC
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGS 193 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-~~g~Iv~vsS 193 (320)
+-|++|..||.... + ..+. .+.+..|.- +++.+.+.+.+. .++.++++|-
T Consensus 71 ~adivvitaG~~~k---~--g~~R---~dll~~N~~----i~~~~~~~i~~~~p~~~vivvsN 121 (312)
T cd05293 71 NSKVVIVTAGARQN---E--GESR---LDLVQRNVD----IFKGIIPKLVKYSPNAILLVVSN 121 (312)
T ss_pred CCCEEEECCCCCCC---C--CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCcEEEEccC
Confidence 34599999997542 2 2333 234455544 445555545443 4677888775
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd08290 ETR 2-enoyl thioester reductase (ETR) | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.099 Score=47.87 Aligned_cols=84 Identities=19% Similarity=0.280 Sum_probs=51.4
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC-cHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD-LDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~ 130 (320)
.|++++|.|+++++|.++++.....|++|+.+.++.+..++..+.+++. +... .+ +..+. .....+.+....++
T Consensus 146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~--g~~~-~~--~~~~~~~~~~~~~i~~~~~~ 220 (341)
T cd08290 146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKAL--GADH-VL--TEEELRSLLATELLKSAPGG 220 (341)
T ss_pred CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhc--CCCE-EE--eCcccccccHHHHHHHHcCC
Confidence 4899999999999999999999999999988887653222222223222 2111 11 11110 00233444444444
Q ss_pred CCeEEEEEccC
Q 020854 131 LDVGVLINNVG 141 (320)
Q Consensus 131 ~~id~lI~nAG 141 (320)
.+|+++.+.|
T Consensus 221 -~~d~vld~~g 230 (341)
T cd08290 221 -RPKLALNCVG 230 (341)
T ss_pred -CceEEEECcC
Confidence 6789998877
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f |
| >cd08301 alcohol_DH_plants Plant alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.13 Score=47.92 Aligned_cols=79 Identities=22% Similarity=0.216 Sum_probs=51.0
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|.+|+|.|+ +++|...++.+...|+ +|+.++++.++.+.+ +++ +.. ..+ |..+...+..+.+.+..+.
T Consensus 187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~-----Ga~-~~i--~~~~~~~~~~~~v~~~~~~ 256 (369)
T cd08301 187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKF-----GVT-EFV--NPKDHDKPVQEVIAEMTGG 256 (369)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc-----CCc-eEE--cccccchhHHHHHHHHhCC
Confidence 4899999985 8999999888888998 799999998876543 222 221 111 2221111233344443443
Q ss_pred CCeEEEEEccC
Q 020854 131 LDVGVLINNVG 141 (320)
Q Consensus 131 ~~id~lI~nAG 141 (320)
.+|+++.+.|
T Consensus 257 -~~d~vid~~G 266 (369)
T cd08301 257 -GVDYSFECTG 266 (369)
T ss_pred -CCCEEEECCC
Confidence 5779998877
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the |
| >smart00829 PKS_ER Enoylreductase | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.15 Score=44.81 Aligned_cols=81 Identities=16% Similarity=0.214 Sum_probs=53.6
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|.+++|.|+++++|..+++.....|++|+.++++.++.+.. +++ +.... ...|..+. +..+++.+..++.
T Consensus 104 ~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~~~-~~~~~~~~--~~~~~~~~~~~~~ 174 (288)
T smart00829 104 PGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFL-REL-----GIPDD-HIFSSRDL--SFADEILRATGGR 174 (288)
T ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCChh-heeeCCCc--cHHHHHHHHhCCC
Confidence 478999999999999999988888999999999988876654 222 11000 01122222 3334455545544
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
.+|.++.+.|
T Consensus 175 ~~d~vi~~~~ 184 (288)
T smart00829 175 GVDVVLNSLA 184 (288)
T ss_pred CcEEEEeCCC
Confidence 5788887766
|
Enoylreductase in Polyketide synthases. |
| >PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.12 Score=46.29 Aligned_cols=44 Identities=25% Similarity=0.334 Sum_probs=36.9
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK 91 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~ 91 (320)
..++.||.++|.|.|+-+|+.++..|.++|++|+++......++
T Consensus 153 ~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~ 196 (284)
T PRK14179 153 NVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLA 196 (284)
T ss_pred CCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHH
Confidence 44678999999999999999999999999999999854433333
|
|
| >PLN02827 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.15 Score=47.79 Aligned_cols=80 Identities=20% Similarity=0.204 Sum_probs=50.6
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLN-LVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~-Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|++|+|+|+ |++|...++.....|++ |+.++++.++.+.. .++ +.. .. .|..+..++..+.+.+..++
T Consensus 193 ~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a-~~l-----Ga~-~~--i~~~~~~~~~~~~v~~~~~~ 262 (378)
T PLN02827 193 KGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKA-KTF-----GVT-DF--INPNDLSEPIQQVIKRMTGG 262 (378)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHc-----CCc-EE--EcccccchHHHHHHHHHhCC
Confidence 5899999985 99999999888889985 77778787765533 322 221 11 22222111333444444443
Q ss_pred CCeEEEEEccCC
Q 020854 131 LDVGVLINNVGI 142 (320)
Q Consensus 131 ~~id~lI~nAG~ 142 (320)
.+|++|.++|.
T Consensus 263 -g~d~vid~~G~ 273 (378)
T PLN02827 263 -GADYSFECVGD 273 (378)
T ss_pred -CCCEEEECCCC
Confidence 57799998883
|
|
| >PRK06932 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.084 Score=48.23 Aligned_cols=89 Identities=10% Similarity=0.131 Sum_probs=54.6
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHH-HHHHHHHHhhcCCceEEEEEEeCCCCcHHHH-HHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKL-KDVSDSIQAKYAKTQIKSVVVDFSGDLDEGV-ERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~-~~~~~~ 127 (320)
.++||++.|.|- |.||+++|+.+...|++|+..+|..... ......+.+..+...+..+.+-++++-+..+ ++..+.
T Consensus 144 ~l~gktvgIiG~-G~IG~~va~~l~~fg~~V~~~~~~~~~~~~~~~~~l~ell~~sDiv~l~~Plt~~T~~li~~~~l~~ 222 (314)
T PRK06932 144 DVRGSTLGVFGK-GCLGTEVGRLAQALGMKVLYAEHKGASVCREGYTPFEEVLKQADIVTLHCPLTETTQNLINAETLAL 222 (314)
T ss_pred ccCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCcccccccccCCHHHHHHhCCEEEEcCCCChHHhcccCHHHHHh
Confidence 478999999987 9999999999999999999988753211 0001112222224567777777665432333 333333
Q ss_pred HcCCCeEEEEEccCC
Q 020854 128 IEGLDVGVLINNVGI 142 (320)
Q Consensus 128 ~~~~~id~lI~nAG~ 142 (320)
.+ .+.++-|.|-
T Consensus 223 mk---~ga~lIN~aR 234 (314)
T PRK06932 223 MK---PTAFLINTGR 234 (314)
T ss_pred CC---CCeEEEECCC
Confidence 33 3355556653
|
|
| >PRK14967 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.64 Score=40.10 Aligned_cols=75 Identities=15% Similarity=0.130 Sum_probs=47.1
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
+..++-.|+++|. ++..+++.|+ +|+.++.++..++...+.+... +..+..+..|..+. +...
T Consensus 37 ~~~vLDlGcG~G~---~~~~la~~~~~~v~~vD~s~~~l~~a~~n~~~~--~~~~~~~~~d~~~~-----------~~~~ 100 (223)
T PRK14967 37 GRRVLDLCTGSGA---LAVAAAAAGAGSVTAVDISRRAVRSARLNALLA--GVDVDVRRGDWARA-----------VEFR 100 (223)
T ss_pred CCeEEEecCCHHH---HHHHHHHcCCCeEEEEECCHHHHHHHHHHHHHh--CCeeEEEECchhhh-----------ccCC
Confidence 5678888887654 3344555566 8999999998877666555433 22445555444321 1223
Q ss_pred CeEEEEEccCCC
Q 020854 132 DVGVLINNVGIS 143 (320)
Q Consensus 132 ~id~lI~nAG~~ 143 (320)
.+|++|.|.+..
T Consensus 101 ~fD~Vi~npPy~ 112 (223)
T PRK14967 101 PFDVVVSNPPYV 112 (223)
T ss_pred CeeEEEECCCCC
Confidence 578999998654
|
|
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.89 Score=42.17 Aligned_cols=115 Identities=23% Similarity=0.304 Sum_probs=70.2
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
+.+.|+|+ |.+|.++|..++..|. +++++|.++++++..+.++....+-.....+.. ..+ .+.+...
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~--~~d--------y~~~~da 106 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILA--STD--------YAVTAGS 106 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEe--CCC--------HHHhCCC
Confidence 68999996 9999999999998874 699999999888777777754321100011111 111 1123433
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC-CCcEEEEEcC
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGS 193 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-~~g~Iv~vsS 193 (320)
| ++|..||.... + ..+.. +.+..|. .+++...+.+.+. .++.++++|-
T Consensus 107 D--iVVitAG~~~k---~--g~tR~---dll~~N~----~I~~~i~~~I~~~~p~~ivivvtN 155 (350)
T PLN02602 107 D--LCIVTAGARQI---P--GESRL---NLLQRNV----ALFRKIIPELAKYSPDTILLIVSN 155 (350)
T ss_pred C--EEEECCCCCCC---c--CCCHH---HHHHHHH----HHHHHHHHHHHHHCCCeEEEEecC
Confidence 5 99999997532 2 23332 3334444 3445555555443 4677787774
|
|
| >PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.019 Score=43.23 Aligned_cols=38 Identities=21% Similarity=0.249 Sum_probs=33.1
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP 87 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~ 87 (320)
++++|+.++|.|| |.+|..-++.|.+.|++|++++.+.
T Consensus 3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~ 40 (103)
T PF13241_consen 3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI 40 (103)
T ss_dssp E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence 5678999999999 9999999999999999999999986
|
|
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.1 Score=47.66 Aligned_cols=46 Identities=22% Similarity=0.388 Sum_probs=39.5
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcC-CeEEEEeCCHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSI 97 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G-~~Vil~~r~~~~~~~~~~~l 97 (320)
+.|++++|.|+ |.+|..+++.|.+.| .+|++++|+.++.++.++++
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~ 222 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL 222 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc
Confidence 56899999987 999999999999877 47999999998877776655
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.12 Score=47.51 Aligned_cols=36 Identities=25% Similarity=0.419 Sum_probs=32.3
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP 87 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~ 87 (320)
.|.+++|.|+++++|.++++.....|++|+.++++.
T Consensus 177 ~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~ 212 (350)
T cd08274 177 AGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA 212 (350)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch
Confidence 489999999999999999999999999998888654
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.075 Score=47.91 Aligned_cols=39 Identities=23% Similarity=0.238 Sum_probs=35.4
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEe-CCH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNP 87 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~-r~~ 87 (320)
.++.||.|+|.|-|+-+|+.+|..|.++|+.|+++. |+.
T Consensus 154 i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~ 193 (296)
T PRK14188 154 GDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR 193 (296)
T ss_pred CCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC
Confidence 467799999999999999999999999999999995 654
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.12 Score=49.60 Aligned_cols=39 Identities=13% Similarity=0.373 Sum_probs=34.7
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVS 94 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~ 94 (320)
.++|.|+ |.+|+++++.|.++|..|++++++.+..++..
T Consensus 2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~ 40 (453)
T PRK09496 2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQ 40 (453)
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHH
Confidence 5788887 99999999999999999999999998876554
|
|
| >PRK14851 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.12 Score=51.98 Aligned_cols=66 Identities=14% Similarity=0.210 Sum_probs=52.5
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCC-------------------HHHHHHHHHHHHhhcCCceEEE
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRN-------------------PDKLKDVSDSIQAKYAKTQIKS 108 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~ 108 (320)
-++++.+|+|.| .||+|..+++.|+..|. +++++|.| ..|.+..++.+.+.++..++..
T Consensus 39 ~kL~~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~ 117 (679)
T PRK14851 39 ERLAEAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITP 117 (679)
T ss_pred HHHhcCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEE
Confidence 357799999998 67999999999999997 78888753 2355667777888888888888
Q ss_pred EEEeCCC
Q 020854 109 VVVDFSG 115 (320)
Q Consensus 109 ~~~D~~~ 115 (320)
+...+++
T Consensus 118 ~~~~i~~ 124 (679)
T PRK14851 118 FPAGINA 124 (679)
T ss_pred EecCCCh
Confidence 8776653
|
|
| >TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.18 Score=48.99 Aligned_cols=41 Identities=15% Similarity=0.047 Sum_probs=36.0
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD 92 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~ 92 (320)
..+.+|+|.|+ |.+|...+..+...|++|++++++.++++.
T Consensus 162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~ 202 (511)
T TIGR00561 162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQ 202 (511)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 44789999996 999999999999999999999999987554
|
In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff. |
| >TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.11 Score=46.53 Aligned_cols=40 Identities=28% Similarity=0.341 Sum_probs=33.4
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCe-EEEEeCCHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLN-LVLVGRNPDKLKD 92 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~-Vil~~r~~~~~~~ 92 (320)
.|++|+|.|+ |++|...++.+...|++ |+.++++.++++.
T Consensus 120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~ 160 (280)
T TIGR03366 120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRREL 160 (280)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence 5899999986 89999999888888986 8888888777543
|
This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. |
| >cd08251 polyketide_synthase polyketide synthase | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.19 Score=44.71 Aligned_cols=79 Identities=20% Similarity=0.285 Sum_probs=53.1
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|.+++|.||++++|.++++.....|++|+.++++.++.+.. +++ +.. .. .|..+. +..+.+.+..+..
T Consensus 120 ~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~-~~--~~~~~~--~~~~~i~~~~~~~ 188 (303)
T cd08251 120 KGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEYL-KQL-----GVP-HV--INYVEE--DFEEEIMRLTGGR 188 (303)
T ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc-----CCC-EE--EeCCCc--cHHHHHHHHcCCC
Confidence 478999999999999999999889999999998887765544 222 211 11 222222 3444455444444
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
.+|+++.+.+
T Consensus 189 ~~d~v~~~~~ 198 (303)
T cd08251 189 GVDVVINTLS 198 (303)
T ss_pred CceEEEECCc
Confidence 6778887664
|
Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a |
| >cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.17 Score=45.42 Aligned_cols=79 Identities=27% Similarity=0.383 Sum_probs=52.0
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLN-LVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~-Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|..++|+| ++++|.++++.+.+.|++ |++++++.++.+ ..+.+ +.. ..+ +..+ .+..+++.+..+.
T Consensus 129 ~~~~vlI~g-~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~-~~~~~-----g~~-~~~--~~~~--~~~~~~l~~~~~~ 196 (312)
T cd08269 129 AGKTVAVIG-AGFIGLLFLQLAAAAGARRVIAIDRRPARLA-LAREL-----GAT-EVV--TDDS--EAIVERVRELTGG 196 (312)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHH-HHHHh-----CCc-eEe--cCCC--cCHHHHHHHHcCC
Confidence 478899996 689999999998899999 999888877655 22222 211 111 1111 2344555554454
Q ss_pred CCeEEEEEccCC
Q 020854 131 LDVGVLINNVGI 142 (320)
Q Consensus 131 ~~id~lI~nAG~ 142 (320)
..+|+++++.|.
T Consensus 197 ~~vd~vld~~g~ 208 (312)
T cd08269 197 AGADVVIEAVGH 208 (312)
T ss_pred CCCCEEEECCCC
Confidence 467899998763
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i |
| >cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.16 Score=46.45 Aligned_cols=78 Identities=23% Similarity=0.347 Sum_probs=51.8
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLN-LVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~-Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|++++|+| ++++|.++++.+...|++ |+.++++.++.+.. .++ +.. .. .|..+. +..+.+.+..++
T Consensus 165 ~g~~VlV~g-~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~-~~~-----g~~-~~--~~~~~~--~~~~~i~~~~~~ 232 (343)
T cd08235 165 PGDTVLVIG-AGPIGLLHAMLAKASGARKVIVSDLNEFRLEFA-KKL-----GAD-YT--IDAAEE--DLVEKVRELTDG 232 (343)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHh-----CCc-EE--ecCCcc--CHHHHHHHHhCC
Confidence 478999996 689999999988888999 88888887776544 222 211 11 222222 344555555555
Q ss_pred CCeEEEEEccC
Q 020854 131 LDVGVLINNVG 141 (320)
Q Consensus 131 ~~id~lI~nAG 141 (320)
..+|++++++|
T Consensus 233 ~~vd~vld~~~ 243 (343)
T cd08235 233 RGADVVIVATG 243 (343)
T ss_pred cCCCEEEECCC
Confidence 45789999877
|
Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i |
| >PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.064 Score=47.97 Aligned_cols=44 Identities=16% Similarity=0.306 Sum_probs=37.9
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK 91 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~ 91 (320)
.+++.||.|+|.|.|.-.|+.++..|.++|++|.++......+.
T Consensus 152 ~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l~ 195 (285)
T PRK14191 152 HIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDLS 195 (285)
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHHH
Confidence 34677999999999999999999999999999999876655544
|
|
| >PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.15 Score=48.02 Aligned_cols=64 Identities=23% Similarity=0.303 Sum_probs=49.2
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCH-------------------HHHHHHHHHHHhhcCCceEEEE
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP-------------------DKLKDVSDSIQAKYAKTQIKSV 109 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~ 109 (320)
++++..|+|.|+ ||+|..+++.|+..|. +++++|.+. .|.+..++.+.+.++..++..+
T Consensus 39 ~L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~ 117 (392)
T PRK07878 39 RLKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLH 117 (392)
T ss_pred HHhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEE
Confidence 467888999976 6999999999999997 788887631 3556667778888888777766
Q ss_pred EEeCC
Q 020854 110 VVDFS 114 (320)
Q Consensus 110 ~~D~~ 114 (320)
..+++
T Consensus 118 ~~~i~ 122 (392)
T PRK07878 118 EFRLD 122 (392)
T ss_pred eccCC
Confidence 65544
|
|
| >TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p | Back alignment and domain information |
|---|
Probab=95.15 E-value=0.16 Score=50.23 Aligned_cols=88 Identities=17% Similarity=0.259 Sum_probs=62.1
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCC----------------------HHHHHHHHHHHHhhcCCceE
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRN----------------------PDKLKDVSDSIQAKYAKTQI 106 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~----------------------~~~~~~~~~~l~~~~~~~~~ 106 (320)
++++.+|+|.|+ ||+|..+|+.|+..|. +++++|.+ ..|.+.+++.+++.+|+..+
T Consensus 335 kL~~~kVLIvGa-GGLGs~VA~~La~~GVg~ItlVD~D~Ve~SNL~RQ~Lf~~~Dv~~~Gk~KA~aAa~~Lk~InP~v~i 413 (664)
T TIGR01381 335 RYSQLKVLLLGA-GTLGCNVARCLIGWGVRHITFVDNGKVSYSNPVRQSLSNFEDCLLGGRGKAETAQKALKRIFPSIQA 413 (664)
T ss_pred HHhcCeEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEECCCccccccccchhhhhhcCCcHHHHHHHHHHHHCCCcEE
Confidence 367888999986 8999999999999997 78888752 12455667788888888888
Q ss_pred EEEEEeC-------CCC----cHHHHHHHHHHHcCCCeEEEEEcc
Q 020854 107 KSVVVDF-------SGD----LDEGVERIKEAIEGLDVGVLINNV 140 (320)
Q Consensus 107 ~~~~~D~-------~~~----~~~~~~~~~~~~~~~~id~lI~nA 140 (320)
..+...+ ++. ..+..+.+.+.+.+.| +|+.+.
T Consensus 414 ~~~~~~Ipm~Gh~i~~~~~~~~~~d~~~l~~Li~~~D--vV~d~t 456 (664)
T TIGR01381 414 TGHRLTVPMPGHPIDEKDVPELEKDIARLEQLIKDHD--VVFLLL 456 (664)
T ss_pred EEeeeeeccccccCCchhhhhccccHHHHHHHHhhCC--EEEECC
Confidence 8877764 221 1223345555566555 666554
|
This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy. |
| >PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.3 Score=43.71 Aligned_cols=45 Identities=13% Similarity=0.310 Sum_probs=38.5
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD 92 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~ 92 (320)
.+++.||.++|.|.|.-+|+-++.-|.++|+.|+++.+....+++
T Consensus 151 ~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~~ 195 (282)
T PRK14169 151 DIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLKQ 195 (282)
T ss_pred CCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHHH
Confidence 456789999999999999999999999999999988665555443
|
|
| >cd05285 sorbitol_DH Sorbitol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.16 Score=46.64 Aligned_cols=81 Identities=25% Similarity=0.345 Sum_probs=52.2
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC-cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLN-LVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD-LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~-Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~ 128 (320)
..|++++|+| ++++|.++++.+-..|++ |+.+++++++.+.. +++ +.. ..+ |..+. ...+.+++.+..
T Consensus 161 ~~g~~vlI~g-~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~-~~~-----g~~-~vi--~~~~~~~~~~~~~~~~~~ 230 (343)
T cd05285 161 RPGDTVLVFG-AGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFA-KEL-----GAT-HTV--NVRTEDTPESAEKIAELL 230 (343)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHc-----CCc-EEe--ccccccchhHHHHHHHHh
Confidence 3488999986 589999998888889998 88888887765433 222 111 111 22221 011245566656
Q ss_pred cCCCeEEEEEccC
Q 020854 129 EGLDVGVLINNVG 141 (320)
Q Consensus 129 ~~~~id~lI~nAG 141 (320)
++.++|+++++.|
T Consensus 231 ~~~~~d~vld~~g 243 (343)
T cd05285 231 GGKGPDVVIECTG 243 (343)
T ss_pred CCCCCCEEEECCC
Confidence 5556889999887
|
Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.051 Score=46.33 Aligned_cols=39 Identities=15% Similarity=0.229 Sum_probs=35.3
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP 87 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~ 87 (320)
.++++||.++|.|| |.+|...++.|.+.|++|++++++.
T Consensus 5 ~l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~ 43 (202)
T PRK06718 5 MIDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL 43 (202)
T ss_pred EEEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 46788999999998 8999999999999999999998764
|
|
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.18 Score=46.32 Aligned_cols=114 Identities=18% Similarity=0.212 Sum_probs=67.9
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCC-------eEEEEeCCH--HHHHHHHHHHHhhc-CC-ceEEEEEEeCCCCcHHHHH
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGL-------NLVLVGRNP--DKLKDVSDSIQAKY-AK-TQIKSVVVDFSGDLDEGVE 122 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~-------~Vil~~r~~--~~~~~~~~~l~~~~-~~-~~~~~~~~D~~~~~~~~~~ 122 (320)
+.|.|+|++|.+|..+|..|+..|. ++++.|.++ ++++..+.++.... +. ..+. ++.
T Consensus 5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~-----i~~------- 72 (326)
T PRK05442 5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVV-----ITD------- 72 (326)
T ss_pred cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcE-----Eec-------
Confidence 5789999999999999999998763 699999854 33555454453321 10 0111 111
Q ss_pred HHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhc-C-CCcEEEEEcC
Q 020854 123 RIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK-R-KKGAIVNIGS 193 (320)
Q Consensus 123 ~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~-~-~~g~Iv~vsS 193 (320)
.-.+.+...| ++|..||... ++ ..+. .+.++.|. .+++.+.+.+.+ . +.+.++++|-
T Consensus 73 ~~y~~~~daD--iVVitaG~~~---k~--g~tR---~dll~~Na----~i~~~i~~~i~~~~~~~~iiivvsN 131 (326)
T PRK05442 73 DPNVAFKDAD--VALLVGARPR---GP--GMER---KDLLEANG----AIFTAQGKALNEVAARDVKVLVVGN 131 (326)
T ss_pred ChHHHhCCCC--EEEEeCCCCC---CC--CCcH---HHHHHHHH----HHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 1123344435 8999999743 22 2233 33445554 455666666665 4 3677777764
|
|
| >cd05295 MDH_like Malate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.29 Score=46.74 Aligned_cols=114 Identities=18% Similarity=0.149 Sum_probs=68.6
Q ss_pred CEEEEECCCCcHHHHHHHHHHHc---CC----eEEEEeC--CHHHHHHHHHHHHhhc-CCc-eEEEEEEeCCCCcHHHHH
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKT---GL----NLVLVGR--NPDKLKDVSDSIQAKY-AKT-QIKSVVVDFSGDLDEGVE 122 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~---G~----~Vil~~r--~~~~~~~~~~~l~~~~-~~~-~~~~~~~D~~~~~~~~~~ 122 (320)
-.|+||||+|-||.++.-.++.- |. .+++++. +.+.++..+-++.... +-. .+... . ++
T Consensus 124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~---~~------ 193 (452)
T cd05295 124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-T---DL------ 193 (452)
T ss_pred eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-E---CC------
Confidence 56999999999999999999972 42 3778888 6788887777776532 111 11111 1 11
Q ss_pred HHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCC--cEEEEEcC
Q 020854 123 RIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKK--GAIVNIGS 193 (320)
Q Consensus 123 ~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~--g~Iv~vsS 193 (320)
.+.+. +.|++|..+|.... + ..+. .+.++.|.. +++...+.+.+..+ .+|+.+.|
T Consensus 194 --~ea~~--daDvvIitag~prk---~--G~~R---~DLL~~N~~----Ifk~~g~~I~~~a~~~~~VlVv~t 250 (452)
T cd05295 194 --DVAFK--DAHVIVLLDDFLIK---E--GEDL---EGCIRSRVA----ICQLYGPLIEKNAKEDVKVIVAGR 250 (452)
T ss_pred --HHHhC--CCCEEEECCCCCCC---c--CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCCCeEEEEeC
Confidence 22334 35599999997432 1 2233 334555554 44555555554443 56666665
|
These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.07 Score=42.13 Aligned_cols=55 Identities=13% Similarity=0.177 Sum_probs=43.0
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~ 116 (320)
+++.+++.|.+ -|.++|..|++.|++|+.+|.++...+...+ ..+..+..|+.+.
T Consensus 16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~--------~~~~~v~dDlf~p 70 (134)
T PRK04148 16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKK--------LGLNAFVDDLFNP 70 (134)
T ss_pred cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHH--------hCCeEEECcCCCC
Confidence 36789999987 7788899999999999999999987655432 1356777777764
|
|
| >cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.2 Score=46.77 Aligned_cols=80 Identities=20% Similarity=0.227 Sum_probs=51.5
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|.+++|.| ++++|.++++.+...|+ +|+.++++.++.+.. +++ +.. .. .+..+...+..+.+.+..+
T Consensus 190 ~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a-~~l-----Ga~-~~--i~~~~~~~~~~~~v~~~~~- 258 (373)
T cd08299 190 PGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKA-KEL-----GAT-EC--INPQDYKKPIQEVLTEMTD- 258 (373)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc-----CCc-eE--ecccccchhHHHHHHHHhC-
Confidence 478999996 59999999999999999 799999988876654 333 221 11 1222111123333333333
Q ss_pred CCeEEEEEccCC
Q 020854 131 LDVGVLINNVGI 142 (320)
Q Consensus 131 ~~id~lI~nAG~ 142 (320)
.++|+++++.|.
T Consensus 259 ~~~d~vld~~g~ 270 (373)
T cd08299 259 GGVDFSFEVIGR 270 (373)
T ss_pred CCCeEEEECCCC
Confidence 357899998873
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically |
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.11 Score=50.22 Aligned_cols=48 Identities=21% Similarity=0.232 Sum_probs=37.2
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHH-HHHHHHHHHHh
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD-KLKDVSDSIQA 99 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~-~~~~~~~~l~~ 99 (320)
+.++.|+|.|+ |++|.++|+.|.++|++|++.+++.. ......+.+++
T Consensus 14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~ 62 (480)
T PRK01438 14 WQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEA 62 (480)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHH
Confidence 56899999997 77999999999999999999986543 33344445544
|
|
| >cd00300 LDH_like L-lactate dehydrogenase-like enzymes | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.47 Score=43.03 Aligned_cols=112 Identities=21% Similarity=0.287 Sum_probs=68.4
Q ss_pred EEECCCCcHHHHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeE
Q 020854 57 LVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG 134 (320)
Q Consensus 57 lITGas~GIG~ala~~l~~~G--~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 134 (320)
.|.|+ |++|.+++..++..| .+++++|+++++++....++........ ......+++ .+.+...|
T Consensus 2 ~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~--~~~i~~~~~--------~~~l~~aD-- 68 (300)
T cd00300 2 TIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLA--TGTIVRGGD--------YADAADAD-- 68 (300)
T ss_pred EEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccC--CCeEEECCC--------HHHhCCCC--
Confidence 57776 679999999999998 5799999999988888777765322100 011111111 22344445
Q ss_pred EEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC-CCcEEEEEcC
Q 020854 135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGS 193 (320)
Q Consensus 135 ~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-~~g~Iv~vsS 193 (320)
++|..||.... + ..+. .+.+..|+ .+++.+.+.+.+. +++.|+++|.
T Consensus 69 iVIitag~p~~---~--~~~R---~~l~~~n~----~i~~~~~~~i~~~~p~~~viv~sN 116 (300)
T cd00300 69 IVVITAGAPRK---P--GETR---LDLINRNA----PILRSVITNLKKYGPDAIILVVSN 116 (300)
T ss_pred EEEEcCCCCCC---C--CCCH---HHHHHHHH----HHHHHHHHHHHHhCCCeEEEEccC
Confidence 99999997432 1 2233 23334444 4455555555544 4677777775
|
Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot |
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.079 Score=38.98 Aligned_cols=37 Identities=22% Similarity=0.488 Sum_probs=32.4
Q ss_pred CCCcHHHHHHHHHHHcC---CeEEEE-eCCHHHHHHHHHHH
Q 020854 61 PTDGIGKSFAFQLAKTG---LNLVLV-GRNPDKLKDVSDSI 97 (320)
Q Consensus 61 as~GIG~ala~~l~~~G---~~Vil~-~r~~~~~~~~~~~l 97 (320)
|+|.+|.++++.|.+.| .+|.+. +|++++.++..++.
T Consensus 6 G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~ 46 (96)
T PF03807_consen 6 GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY 46 (96)
T ss_dssp STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh
Confidence 88999999999999999 899965 99999988776654
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.93 Score=41.25 Aligned_cols=113 Identities=18% Similarity=0.212 Sum_probs=69.0
Q ss_pred EEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhhcC---CceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 56 ALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYA---KTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 56 vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
+.|.|+ |.+|..+|..|+.+|. ++++.|.++++.+..+.++....+ ...+... . .| .+.+..
T Consensus 2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~-~--~~---------y~~~~~ 68 (307)
T cd05290 2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIR-A--GD---------YDDCAD 68 (307)
T ss_pred EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEE-E--CC---------HHHhCC
Confidence 678888 9999999999998885 699999999888777777765322 1122222 1 11 233344
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcC
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGS 193 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS 193 (320)
.| ++|..||.... + ..+.+ =.+.++.| ..+++...|.+.+.. ++.++++|-
T Consensus 69 aD--ivvitaG~~~k---p--g~tr~-R~dll~~N----~~I~~~i~~~i~~~~p~~i~ivvsN 120 (307)
T cd05290 69 AD--IIVITAGPSID---P--GNTDD-RLDLAQTN----AKIIREIMGNITKVTKEAVIILITN 120 (307)
T ss_pred CC--EEEECCCCCCC---C--CCCch-HHHHHHHH----HHHHHHHHHHHHHhCCCeEEEEecC
Confidence 35 89999997532 2 22311 12233444 446666777666555 455555543
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK10309 galactitol-1-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.19 Score=46.24 Aligned_cols=78 Identities=15% Similarity=0.256 Sum_probs=50.0
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLN-LVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~-Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|++++|+| ++++|.+.++.+...|++ |+.++++.++.+.. +++ +.. ..+ |..+. . .+++.+..++
T Consensus 160 ~g~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~-----Ga~-~~i--~~~~~--~-~~~~~~~~~~ 226 (347)
T PRK10309 160 EGKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEKLALA-KSL-----GAM-QTF--NSREM--S-APQIQSVLRE 226 (347)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHc-----CCc-eEe--cCccc--C-HHHHHHHhcC
Confidence 488999997 599999999888889997 67888888876643 333 221 122 22222 1 2344444444
Q ss_pred CCeE-EEEEccCC
Q 020854 131 LDVG-VLINNVGI 142 (320)
Q Consensus 131 ~~id-~lI~nAG~ 142 (320)
..+| +++.++|.
T Consensus 227 ~~~d~~v~d~~G~ 239 (347)
T PRK10309 227 LRFDQLILETAGV 239 (347)
T ss_pred CCCCeEEEECCCC
Confidence 4566 77777773
|
|
| >PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.93 E-value=0.21 Score=44.66 Aligned_cols=45 Identities=22% Similarity=0.384 Sum_probs=38.8
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD 92 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~ 92 (320)
..++.||.|+|.|.|.-+|+-++.-|.++|+.|+++.+....+.+
T Consensus 153 ~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~~ 197 (282)
T PRK14180 153 GIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKS 197 (282)
T ss_pred CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHHH
Confidence 345779999999999999999999999999999998776655544
|
|
| >cd05195 enoyl_red enoyl reductase of polyketide synthase | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.29 Score=42.95 Aligned_cols=81 Identities=15% Similarity=0.178 Sum_probs=53.7
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|.+++|.|+++++|..+++.....|++|+.++++.++.+...+ .++ ... ...|..+ .+..+++.+..++.
T Consensus 108 ~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~~~--~~~-~~~~~~~--~~~~~~~~~~~~~~ 178 (293)
T cd05195 108 KGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLRE----LGG--PVD-HIFSSRD--LSFADGILRATGGR 178 (293)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----hCC--Ccc-eEeecCc--hhHHHHHHHHhCCC
Confidence 47899999999999999998888899999999988776554322 111 000 1122222 24445555555444
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
.+|.++.+.|
T Consensus 179 ~~d~vi~~~~ 188 (293)
T cd05195 179 GVDVVLNSLS 188 (293)
T ss_pred CceEEEeCCC
Confidence 6789998776
|
Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase |
| >TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein | Back alignment and domain information |
|---|
Probab=94.91 E-value=2.7 Score=38.35 Aligned_cols=168 Identities=14% Similarity=0.090 Sum_probs=86.8
Q ss_pred cHHHHHHHHHHHcCCeEEEEeCCHHHHH-HHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeEEEEEccCC
Q 020854 64 GIGKSFAFQLAKTGLNLVLVGRNPDKLK-DVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGI 142 (320)
Q Consensus 64 GIG~ala~~l~~~G~~Vil~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lI~nAG~ 142 (320)
-=|.++|+.|++.|+.|++.+|+.++.+ +..+.+.+.+ .. ..++ ..+.....| ++|.+...
T Consensus 30 ~gGspMArnLlkAGheV~V~Drnrsa~e~e~~e~LaeaG--A~-------~AaS-------~aEAAa~AD--VVIL~LPd 91 (341)
T TIGR01724 30 YGGSRMAIEFAMAGHDVVLAEPNREFMSDDLWKKVEDAG--VK-------VVSD-------DKEAAKHGE--IHVLFTPF 91 (341)
T ss_pred CCHHHHHHHHHHCCCEEEEEeCChhhhhhhhhHHHHHCC--Ce-------ecCC-------HHHHHhCCC--EEEEecCC
Confidence 3478999999999999999999987653 3344444432 11 1111 112223334 78776542
Q ss_pred CCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHHHHHHHHHHHHHH
Q 020854 143 SYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSL 222 (320)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~~~~~l 222 (320)
.+..++++ .-+++.+ +.|++|.-+|..+- ..+.+.|
T Consensus 92 ------------~aaV~eVl-----------~GLaa~L---~~GaIVID~STIsP------------------~t~~~~~ 127 (341)
T TIGR01724 92 ------------GKGTFSIA-----------RTIIEHV---PENAVICNTCTVSP------------------VVLYYSL 127 (341)
T ss_pred ------------HHHHHHHH-----------HHHHhcC---CCCCEEEECCCCCH------------------HHHHHHH
Confidence 11122221 2344443 34556555543331 1334444
Q ss_pred HHHHc--cCCceEEEEeccce-ecCCCcc-----ccCCCCCCCHHHHHHHHHHHhC---CCCcccCCchHHHHHHHHhhc
Q 020854 223 YVEYR--KSGIDVQCQVPLYV-ATKMASI-----KRSSFFVPSTDVYARAAMRWIG---YEPCCTPYWPHSFIWGVLSIL 291 (320)
Q Consensus 223 ~~el~--~~gi~v~~v~PG~v-~T~~~~~-----~~~~~~~~~~~~~a~~i~~~l~---~~~~~~~~~~~~~~~~l~~~~ 291 (320)
-.+|+ +..+.|.+.|||.| .|+-... ..........|+-.+.++...+ ......|.+.-..+.-+.+..
T Consensus 128 e~~l~~~r~d~~v~s~HP~~vP~~~~~~~~~~~~~~~~~~~~A~ee~i~~~~el~~~~~~~~~~~pa~l~~~v~Dm~s~v 207 (341)
T TIGR01724 128 EKILRLKRTDVGISSMHPAAVPGTPQHGHYVIGGKPTAGKEMATEEQISKCVELAKSTGKKAYVVPADVTSAVADMGSLV 207 (341)
T ss_pred HHHhhcCccccCeeccCCCCCCCCCCCceeeeccccccccccCCHHHHHHHHHHHHHhCCCeeecchhhcchhhhHHHHH
Confidence 44443 56799999999988 4444321 1111112344455555554433 335556655555555555544
Q ss_pred hH
Q 020854 292 PE 293 (320)
Q Consensus 292 P~ 293 (320)
..
T Consensus 208 ta 209 (341)
T TIGR01724 208 TA 209 (341)
T ss_pred HH
Confidence 33
|
This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown. |
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.13 Score=39.18 Aligned_cols=71 Identities=18% Similarity=0.375 Sum_probs=47.0
Q ss_pred EEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeEE
Q 020854 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGV 135 (320)
Q Consensus 56 vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 135 (320)
++|.|. |.+|+.+++.|.+.+.+|++++++++..++.. +. + +..+..|.++. + ..++.+-.+.+.
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~----~~--~--~~~i~gd~~~~--~----~l~~a~i~~a~~ 65 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELR----EE--G--VEVIYGDATDP--E----VLERAGIEKADA 65 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHH----HT--T--SEEEES-TTSH--H----HHHHTTGGCESE
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHH----hc--c--cccccccchhh--h----HHhhcCccccCE
Confidence 466676 57999999999997779999999998865543 22 2 66788898875 2 223222223446
Q ss_pred EEEccC
Q 020854 136 LINNVG 141 (320)
Q Consensus 136 lI~nAG 141 (320)
+|...+
T Consensus 66 vv~~~~ 71 (116)
T PF02254_consen 66 VVILTD 71 (116)
T ss_dssp EEEESS
T ss_pred EEEccC
Confidence 665543
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=94.88 E-value=0.06 Score=43.31 Aligned_cols=42 Identities=17% Similarity=0.489 Sum_probs=35.6
Q ss_pred EEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHh
Q 020854 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQA 99 (320)
Q Consensus 56 vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~ 99 (320)
|+.+|+++-+|+++|..|.++|.+|+.+ ++++.+.+..++..
T Consensus 1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~~~ 42 (164)
T PF12076_consen 1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEAPE 42 (164)
T ss_pred CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHcCH
Confidence 5789999999999999999999999998 66666666666644
|
This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases []. |
| >cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2 | Back alignment and domain information |
|---|
Probab=94.87 E-value=0.26 Score=45.17 Aligned_cols=77 Identities=26% Similarity=0.456 Sum_probs=51.6
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|++++|+| ++++|.++++.+...|+ +|+.+++++++... .+++ +.. . .+..+. +..+.+.+..++
T Consensus 167 ~~~~vlI~g-~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~-~~~~-----g~~--~--~~~~~~--~~~~~l~~~~~~ 233 (344)
T cd08284 167 PGDTVAVIG-CGPVGLCAVLSAQVLGAARVFAVDPVPERLER-AAAL-----GAE--P--INFEDA--EPVERVREATEG 233 (344)
T ss_pred cCCEEEEEC-CcHHHHHHHHHHHHcCCceEEEEcCCHHHHHH-HHHh-----CCe--E--EecCCc--CHHHHHHHHhCC
Confidence 489999996 68999999999999997 78888777666433 2222 221 1 233322 344555555554
Q ss_pred CCeEEEEEccC
Q 020854 131 LDVGVLINNVG 141 (320)
Q Consensus 131 ~~id~lI~nAG 141 (320)
.++|+++++.|
T Consensus 234 ~~~dvvid~~~ 244 (344)
T cd08284 234 RGADVVLEAVG 244 (344)
T ss_pred CCCCEEEECCC
Confidence 56789998876
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical |
| >PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.25 Score=45.27 Aligned_cols=89 Identities=9% Similarity=0.102 Sum_probs=54.4
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHH-HcCCeEEEEeCCHHHH--HHH---HHHHHhhcCCceEEEEEEeCCCCcHHHH-H
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLA-KTGLNLVLVGRNPDKL--KDV---SDSIQAKYAKTQIKSVVVDFSGDLDEGV-E 122 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~-~~G~~Vil~~r~~~~~--~~~---~~~l~~~~~~~~~~~~~~D~~~~~~~~~-~ 122 (320)
.++||++.|.|- |.||+++|+.+. ..|.+|+..+|..... ... ..++.+......+..+.+-++++.+..+ +
T Consensus 142 ~L~gktvGIiG~-G~IG~~va~~l~~~fgm~V~~~~~~~~~~~~~~~~~~~~~l~ell~~sDvv~lh~plt~~T~~li~~ 220 (323)
T PRK15409 142 DVHHKTLGIVGM-GRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCIILPLTDETHHLFGA 220 (323)
T ss_pred CCCCCEEEEEcc-cHHHHHHHHHHHhcCCCEEEEECCCCchhhHHhcCcEecCHHHHHHhCCEEEEeCCCChHHhhccCH
Confidence 478999999997 999999999997 7899999888763211 110 0112222224567777777776433433 2
Q ss_pred HHHHHHcCCCeEEEEEccCC
Q 020854 123 RIKEAIEGLDVGVLINNVGI 142 (320)
Q Consensus 123 ~~~~~~~~~~id~lI~nAG~ 142 (320)
+..+.. +.+.++-|.|-
T Consensus 221 ~~l~~m---k~ga~lIN~aR 237 (323)
T PRK15409 221 EQFAKM---KSSAIFINAGR 237 (323)
T ss_pred HHHhcC---CCCeEEEECCC
Confidence 233333 33455555553
|
|
| >TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.38 Score=45.15 Aligned_cols=115 Identities=16% Similarity=0.179 Sum_probs=69.8
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCC-e----EEE----EeCCHHHHHHHHHHHHhhc-CCceEEEEEEeCCCCcHHHHHH
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGL-N----LVL----VGRNPDKLKDVSDSIQAKY-AKTQIKSVVVDFSGDLDEGVER 123 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~-~----Vil----~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~D~~~~~~~~~~~ 123 (320)
-.|.|+|++|.+|.++|..++..|. . |.+ .++++++++..+-++.... +-.. ...++..
T Consensus 45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~----~v~i~~~------- 113 (387)
T TIGR01757 45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLR----EVSIGID------- 113 (387)
T ss_pred eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcC----ceEEecC-------
Confidence 5699999999999999999998874 3 444 4889998888777776532 1110 1111111
Q ss_pred HHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhc-C-CCcEEEEEcC
Q 020854 124 IKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK-R-KKGAIVNIGS 193 (320)
Q Consensus 124 ~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~-~-~~g~Iv~vsS 193 (320)
-.+.+.. -|++|..||... ++ ..+. .+.++.|.. +++...+.+.+ . +.+.|+++|-
T Consensus 114 ~y~~~kd--aDIVVitAG~pr---kp--g~tR---~dll~~N~~----I~k~i~~~I~~~a~~~~iviVVsN 171 (387)
T TIGR01757 114 PYEVFED--ADWALLIGAKPR---GP--GMER---ADLLDINGQ----IFADQGKALNAVASKNCKVLVVGN 171 (387)
T ss_pred CHHHhCC--CCEEEECCCCCC---CC--CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCCeEEEEcCC
Confidence 0223343 449999999743 22 2233 334455544 45555555554 3 4677777764
|
This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized. |
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.71 Score=41.90 Aligned_cols=43 Identities=21% Similarity=0.225 Sum_probs=35.0
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHH
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSI 97 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l 97 (320)
+.+.|.|+ |.+|..+|..++..|. +|++++++++.++....++
T Consensus 3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl 46 (307)
T PRK06223 3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDI 46 (307)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHH
Confidence 46889998 8899999999999875 9999999888765544444
|
|
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.28 Score=41.89 Aligned_cols=40 Identities=23% Similarity=0.203 Sum_probs=34.3
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD 88 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~ 88 (320)
.+++.||.++|.|| |.+|..-++.|++.|++|++++.+..
T Consensus 4 ~l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~ 43 (205)
T TIGR01470 4 FANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE 43 (205)
T ss_pred EEEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence 45688999999997 67889999999999999999987654
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=94.77 E-value=0.19 Score=45.53 Aligned_cols=41 Identities=29% Similarity=0.368 Sum_probs=35.8
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV 93 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~ 93 (320)
+.+++|.|+++++|.++++.....|++|+.++++.++.+..
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~ 187 (325)
T cd05280 147 DGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYL 187 (325)
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 56899999999999999988888999999999998775544
|
Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so |
| >cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=94.77 E-value=0.23 Score=46.17 Aligned_cols=79 Identities=20% Similarity=0.175 Sum_probs=50.1
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|.+++|.| ++++|...++.....|+ +|+.++++.++.+.. +++ +.. ..+ |..+...+..+.+.+..+
T Consensus 184 ~g~~vlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~-~~~-----ga~-~~i--~~~~~~~~~~~~~~~~~~- 252 (365)
T cd08277 184 PGSTVAVFG-LGAVGLSAIMGAKIAGASRIIGVDINEDKFEKA-KEF-----GAT-DFI--NPKDSDKPVSEVIREMTG- 252 (365)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc-----CCC-cEe--ccccccchHHHHHHHHhC-
Confidence 489999997 59999999998888898 699999988776544 223 221 111 221110122333443333
Q ss_pred CCeEEEEEccC
Q 020854 131 LDVGVLINNVG 141 (320)
Q Consensus 131 ~~id~lI~nAG 141 (320)
..+|++|.+.|
T Consensus 253 ~g~d~vid~~g 263 (365)
T cd08277 253 GGVDYSFECTG 263 (365)
T ss_pred CCCCEEEECCC
Confidence 35779998887
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i |
| >TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=94.76 E-value=0.19 Score=45.82 Aligned_cols=41 Identities=20% Similarity=0.324 Sum_probs=34.5
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHc-CCeEEEEeCCHHHHHHH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKT-GLNLVLVGRNPDKLKDV 93 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~-G~~Vil~~r~~~~~~~~ 93 (320)
|.+++|+|+++++|.++++..... |++|+.++++.++.+.+
T Consensus 149 g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l 190 (336)
T TIGR02817 149 KRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWV 190 (336)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHH
Confidence 789999999999999988666666 99999998888765544
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 320 | ||||
| 2wdz_A | 254 | Crystal Structure Of The Short Chain Dehydrogenase | 4e-16 | ||
| 2pnf_A | 248 | Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl- | 1e-15 | ||
| 3t4x_A | 267 | Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU | 3e-15 | ||
| 4dc1_A | 281 | Crystal Structure Of Y202f Actinorhodin Polyketide | 1e-14 | ||
| 1xkq_A | 280 | Crystal Structure Of Short-Chain DehydrogenaseREDUC | 3e-14 | ||
| 1w4z_A | 281 | Structure Of Actinorhodin Polyketide (Actiii) Reduc | 3e-14 | ||
| 2rh4_A | 277 | Actinorhodin Ketoreductase, Actkr, With Nadph And I | 3e-14 | ||
| 4dc0_A | 281 | Crystal Structure Of F189w Actinorhodin Polyketide | 3e-14 | ||
| 1x7g_A | 261 | Actinorhodin Polyketide Ketoreductase, Act Kr, With | 3e-14 | ||
| 3ai1_A | 263 | The Crystal Structure Of L-Sorbose Reductase From G | 5e-14 | ||
| 4dbz_A | 281 | Crystal Structure Of V151l Actinorhodin Polyketide | 7e-14 | ||
| 3grp_A | 266 | 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl- | 1e-13 | ||
| 3ai3_A | 263 | The Crystal Structure Of L-Sorbose Reductase From G | 2e-13 | ||
| 3sj7_A | 252 | Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F | 2e-13 | ||
| 1spx_A | 278 | Crystal Structure Of Glucose Dehydrogenase Of Caeno | 2e-13 | ||
| 2rhr_B | 277 | P94l Actinorhodin Ketordeuctase Mutant, With Nadph | 4e-13 | ||
| 3csd_B | 281 | Actinorhodin Polyketide Ketoreductase Mutant P94l B | 4e-13 | ||
| 3asu_A | 248 | Crystal Structure Of Serine Dehydrogenase From Esch | 5e-13 | ||
| 3rsh_A | 251 | Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc | 8e-13 | ||
| 1yb1_A | 272 | Crystal Structure Of Human 17-Beta-Hydroxysteroid D | 9e-13 | ||
| 4b79_A | 242 | The Aeropath Project And Pseudomonas Aeruginosa Hig | 2e-12 | ||
| 3tzc_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 2e-12 | ||
| 2cfc_A | 250 | Structural Basis For Stereo Selectivity In The (R)- | 3e-12 | ||
| 1xhl_A | 297 | Crystal Structure Of Putative Tropinone Reductase-I | 3e-12 | ||
| 3v2h_A | 281 | The Crystal Structure Of D-Beta-Hydroxybutyrate Deh | 3e-12 | ||
| 1yxm_A | 303 | Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa | 3e-12 | ||
| 3tzh_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 3e-12 | ||
| 3rku_A | 287 | Substrate Fingerprint And The Structure Of Nadp+ De | 3e-12 | ||
| 3tzk_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 5e-12 | ||
| 1i01_A | 244 | Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr | 5e-12 | ||
| 3u09_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 9e-12 | ||
| 3osu_A | 246 | Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro | 1e-11 | ||
| 4ibo_A | 271 | Crystal Structure Of A Putative Gluconate Dehydroge | 1e-11 | ||
| 1q7c_A | 244 | The Structure Of Betaketoacyl-[acp] Reductase Y151f | 1e-11 | ||
| 2hq1_A | 247 | Crystal Structure Of Orf 1438 A Putative GlucoseRIB | 2e-11 | ||
| 3emk_A | 246 | 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN | 2e-11 | ||
| 3enn_A | 249 | 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN | 2e-11 | ||
| 3uf0_A | 273 | Crystal Structure Of A Putative Nad(P) Dependent Gl | 3e-11 | ||
| 2uvd_A | 246 | The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier | 4e-11 | ||
| 4afn_A | 269 | Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote | 4e-11 | ||
| 4bb6_A | 292 | Free-Wilson And Structural Approaches To Co-Optimis | 5e-11 | ||
| 2ae2_A | 260 | Tropinone Reductase-Ii Complexed With Nadp+ And Pse | 5e-11 | ||
| 1ipe_A | 259 | Tropinone Reductase-Ii Complexed With Nadph Length | 5e-11 | ||
| 4bb5_A | 292 | Free-Wilson And Structural Approaches To Co-Optimis | 5e-11 | ||
| 1edo_A | 244 | The X-Ray Structure Of Beta-Keto Acyl Carrier Prote | 8e-11 | ||
| 1vl8_A | 267 | Crystal Structure Of Gluconate 5-dehydrogenase (tm0 | 9e-11 | ||
| 2cf2_E | 226 | Architecture Of Mammalian Fatty Acid Synthase Lengt | 9e-11 | ||
| 2bel_A | 283 | Structure Of Human 11-Beta-Hydroxysteroid Dehydroge | 1e-10 | ||
| 2irw_A | 264 | Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W | 1e-10 | ||
| 4hfr_A | 272 | Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In | 1e-10 | ||
| 1xu7_A | 286 | Crystal Structure Of The Interface Open Conformatio | 1e-10 | ||
| 2ilt_A | 275 | Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W | 1e-10 | ||
| 3pdj_A | 273 | Crystal Structure Of Human 11-Beta-Hydroxysteroid D | 1e-10 | ||
| 2rbe_A | 275 | The Discovery Of 2-Anilinothiazolones As 11beta-Hsd | 1e-10 | ||
| 3d5q_A | 272 | Crystal Structure Of 11b-Hsd1 In Complex With Triaz | 1e-10 | ||
| 3ftp_A | 270 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 1e-10 | ||
| 3awd_A | 260 | Crystal Structure Of Gox2181 Length = 260 | 1e-10 | ||
| 2nwq_A | 272 | Short Chain Dehydrogenase From Pseudomonas Aerugino | 2e-10 | ||
| 3ch6_A | 286 | Crystal Structure Of 11beta-Hsd1 Double Mutant (L26 | 2e-10 | ||
| 2yz7_A | 260 | X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F | 2e-10 | ||
| 3f5q_A | 262 | Crystal Structure Of Putative Short Chain Dehydroge | 2e-10 | ||
| 3o4r_A | 261 | Crystal Structure Of Human DehydrogenaseREDUCTASE ( | 3e-10 | ||
| 2b4q_A | 276 | Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex | 3e-10 | ||
| 3rih_A | 293 | Crystal Structure Of A Putative Short Chain Dehydro | 3e-10 | ||
| 3gk3_A | 269 | Crystal Structure Of Acetoacetyl-Coa Reductase From | 4e-10 | ||
| 2jap_A | 247 | Clavulanic Acid Dehydrogenase: Structural And Bioch | 5e-10 | ||
| 3g1t_A | 258 | Crystal Structure Of Short Chain Dehydrogenase From | 7e-10 | ||
| 3op4_A | 248 | Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr | 1e-09 | ||
| 3f1l_A | 252 | The 0.95 A Structure Of An Oxidoreductase, Ycik Fro | 2e-09 | ||
| 3lz6_A | 263 | Guinea Pig 11beta Hydroxysteroid Dehydrogenase With | 2e-09 | ||
| 3g49_A | 277 | N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b- | 2e-09 | ||
| 3dwf_A | 276 | Crystal Structure Of The Guinea Pig 11beta-Hydroxys | 2e-09 | ||
| 3tfo_A | 264 | Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car | 2e-09 | ||
| 1xse_A | 295 | Crystal Structure Of Guinea Pig 11beta-Hydroxystero | 2e-09 | ||
| 2zat_A | 260 | Crystal Structure Of A Mammalian Reductase Length = | 2e-09 | ||
| 3m1a_A | 281 | The Crystal Structure Of A Short-Chain Dehydrogenas | 2e-09 | ||
| 1o5i_A | 249 | Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei | 2e-09 | ||
| 3f5s_A | 255 | Crystal Structure Of Putatitve Short Chain Dehydrog | 3e-09 | ||
| 3rkr_A | 262 | Crystal Structure Of A Metagenomic Short-Chain Oxid | 3e-09 | ||
| 3f9i_A | 249 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 3e-09 | ||
| 2jah_A | 247 | Biochemical And Structural Analysis Of The Clavulan | 4e-09 | ||
| 3cxr_A | 291 | Crystal Structure Of Gluconate 5-Dehydrogase From S | 4e-09 | ||
| 1xq1_A | 266 | X-Ray Structure Of Putative Tropinone Reducatse Fro | 4e-09 | ||
| 3sju_A | 279 | Hedamycin Polyketide Ketoreductase Bound To Nadph L | 4e-09 | ||
| 2c07_A | 285 | Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng | 4e-09 | ||
| 2ph3_A | 245 | Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei | 5e-09 | ||
| 1ae1_A | 273 | Tropinone Reductase-I Complex With Nadp Length = 27 | 5e-09 | ||
| 1pr9_A | 244 | Human L-Xylulose Reductase Holoenzyme Length = 244 | 6e-09 | ||
| 3d3w_A | 244 | Structure Of L-Xylulose Reductase With Bound Coenzy | 9e-09 | ||
| 4g81_D | 255 | Crystal Structure Of A Hexonate Dehydrogenase Ortho | 9e-09 | ||
| 3ezl_A | 256 | Crystal Structure Of Acetyacetyl-Coa Reductase From | 2e-08 | ||
| 1geg_A | 256 | Cryatal Structure Analysis Of Meso-2,3-Butanediol D | 2e-08 | ||
| 4imr_A | 275 | Crystal Structure Of 3-oxoacyl (acyl-carrier-protei | 2e-08 | ||
| 3ucx_A | 264 | The Structure Of A Short Chain Dehydrogenase From M | 3e-08 | ||
| 3tjr_A | 301 | Crystal Structure Of A Rv0851c Ortholog Short Chain | 3e-08 | ||
| 3gmd_A | 264 | Structure-Based Design Of 7-Azaindole-Pyrrolidines | 3e-08 | ||
| 1y5m_A | 276 | The Crystal Structure Of Murine 11b-Hydroxysteroid | 3e-08 | ||
| 3lyl_A | 247 | Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas | 3e-08 | ||
| 2q2q_A | 255 | Structure Of D-3-Hydroxybutyrate Dehydrogenase From | 4e-08 | ||
| 1wmb_A | 260 | Crystal Structure Of Nad Dependent D-3-Hydroxybutyl | 4e-08 | ||
| 3d3w_B | 245 | Structure Of L-Xylulose Reductase With Bound Coenzy | 4e-08 | ||
| 2ztm_A | 260 | T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L | 8e-08 | ||
| 2ztu_A | 260 | T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C | 9e-08 | ||
| 3nug_A | 247 | Crystal Structure Of Wild Type Tetrameric Pyridoxal | 1e-07 | ||
| 1x1e_A | 239 | Crystal Structure Of Tt0495 Protein From Thermus Th | 1e-07 | ||
| 3s55_A | 281 | Crystal Structure Of A Putative Short-Chain Dehydro | 2e-07 | ||
| 3r1i_A | 276 | Crystal Structure Of A Short-Chain Type Dehydrogena | 2e-07 | ||
| 3gvc_A | 277 | Crystal Structure Of Probable Short-Chain Dehydroge | 2e-07 | ||
| 2d1y_A | 256 | Crystal Structure Of Tt0321 From Thermus Thermophil | 3e-07 | ||
| 1zbq_A | 327 | Crystal Structure Of Human 17-beta-hydroxysteroid D | 3e-07 | ||
| 3oec_A | 317 | Crystal Structure Of Carveol Dehydrogenase From Myc | 3e-07 | ||
| 4hp8_A | 247 | Crystal Structure Of A Putative 2-Deoxy-D-Gluconate | 3e-07 | ||
| 3pk0_A | 262 | Crystal Structure Of Short-Chain DehydrogenaseREDUC | 3e-07 | ||
| 3qiv_A | 253 | Crystal Structure Of A Putative Short-Chain Dehydro | 4e-07 | ||
| 4egf_A | 266 | Crystal Structure Of A L-Xylulose Reductase From My | 4e-07 | ||
| 3u5t_A | 267 | The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr | 4e-07 | ||
| 2ew8_A | 249 | Crystal Structure Of The (s)-specific 1-phenylethan | 9e-07 | ||
| 3ndr_A | 247 | Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro | 9e-07 | ||
| 1k2w_A | 256 | Crystal Structure Of Sorbitol Dehydrogenase From R. | 1e-06 | ||
| 3p19_A | 266 | Improved Nadph-Dependent Blue Fluorescent Protein L | 1e-06 | ||
| 4e3z_A | 272 | Crystal Structure Of A Oxidoreductase From Rhizobiu | 1e-06 | ||
| 3f1k_A | 252 | Crystal Structure Of Ycik From E. Coli, An Oxidored | 1e-06 | ||
| 3ioy_A | 319 | Structure Of Putative Short-Chain Dehydrogenase (Sa | 2e-06 | ||
| 4fgs_A | 273 | Crystal Structure Of A Probable Dehydrogenase Prote | 2e-06 | ||
| 3iah_A | 256 | Crystal Structure Of Short Chain Dehydrogenase (yci | 2e-06 | ||
| 4dqx_A | 277 | Crystal Structure Of A Short Chain Dehydrogenase Fr | 2e-06 | ||
| 1xg5_A | 279 | Structure Of Human Putative Dehydrogenase Mgc4172 I | 3e-06 | ||
| 4fn4_A | 254 | Short-chain Nad(h)-dependent Dehydrogenase/reductas | 3e-06 | ||
| 3pgx_A | 280 | Crystal Structure Of A Putative Carveol Dehydrogena | 3e-06 | ||
| 3u0b_A | 454 | Crystal Structure Of An Oxidoreductase From Mycobac | 4e-06 | ||
| 1cyd_A | 244 | Carbonyl Reductase Complexed With Nadph And 2-Propa | 5e-06 | ||
| 4dml_A | 269 | 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn | 5e-06 | ||
| 1rwb_A | 261 | Cooperative Effect Of Two Surface Amino Acid Mutati | 5e-06 | ||
| 3nyw_A | 250 | Crystal Structure Of A Betaketoacyl-[acp] Reductase | 5e-06 | ||
| 1g6k_A | 261 | Crystal Structure Of Glucose Dehydrogenase Mutant E | 7e-06 | ||
| 1gee_A | 261 | Crystal Structure Of Glucose Dehydrogenase Mutant Q | 8e-06 | ||
| 4iiu_A | 267 | Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car | 9e-06 | ||
| 1gco_A | 261 | Crystal Structure Of Glucose Dehydrogenase Complexe | 9e-06 | ||
| 3m1l_A | 432 | Crystal Strucutre Of A C-Terminal Trunacted Mutant | 9e-06 | ||
| 3v1t_C | 462 | Crystal Structure Of A Putative Ketoacyl Reductase | 9e-06 | ||
| 3q6i_A | 446 | Crystal Structure Of Fabg4 And Coenzyme Binary Comp | 1e-05 | ||
| 3lls_A | 475 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 1e-05 | ||
| 4fw8_A | 454 | Crystal Structure Of Fabg4 Complexed With Coenzyme | 1e-05 | ||
| 3r3s_A | 294 | Structure Of The Ygha Oxidoreductase From Salmonell | 1e-05 | ||
| 3icc_A | 255 | Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car | 1e-05 | ||
| 3i3o_A | 291 | 2.06 Angstrom Resolution Crystal Structure Of A Sho | 1e-05 | ||
| 2ehd_A | 234 | Crystal Structure Analysis Of Oxidoreductase Length | 1e-05 | ||
| 3tzq_B | 271 | Crystal Structure Of A Short-Chain Type Dehydrogena | 1e-05 | ||
| 3ijr_A | 291 | 2.05 Angstrom Resolution Crystal Structure Of A Sho | 2e-05 | ||
| 3e9q_A | 273 | Crystal Structure Of The Short Chain Dehydrogenase | 2e-05 | ||
| 2et6_A | 604 | (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid | 2e-05 | ||
| 1uzm_A | 247 | Maba From Mycobacterium Tuberculosis Length = 247 | 2e-05 | ||
| 2nm0_A | 253 | Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl | 2e-05 | ||
| 1ja9_A | 274 | Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen | 3e-05 | ||
| 1gz6_A | 319 | (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat | 4e-05 | ||
| 3oml_A | 613 | Structure Of Full-Length Peroxisomal Multifunctiona | 5e-05 | ||
| 1uzl_A | 247 | Maba From Mycobacterium Tuberculosis Length = 247 | 5e-05 | ||
| 2qq5_A | 260 | Crystal Structure Of Human Sdr Family Member 1 Leng | 6e-05 | ||
| 1ahi_A | 255 | 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With | 6e-05 | ||
| 1nxq_A | 251 | Crystal Structure Of R-Alcohol Dehydrogenase (Radh) | 6e-05 | ||
| 1zem_A | 262 | Crystal Structure Of Nad+-Bound Xylitol Dehydrogena | 8e-05 | ||
| 3lf1_A | 265 | Apo Structure Of The Short Chain Oxidoreductase Q9h | 1e-04 | ||
| 2ntn_A | 267 | Crystal Structure Of Maba-c60v/g139a/s144l Length = | 1e-04 | ||
| 3uve_A | 286 | Crystal Structure Of Carveol Dehydrogenase ((+)-Tra | 1e-04 | ||
| 3oic_A | 258 | Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl | 2e-04 | ||
| 1yde_A | 270 | Crystal Structure Of Human Retinal Short-Chain Dehy | 2e-04 | ||
| 4iin_A | 271 | Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car | 2e-04 | ||
| 3l77_A | 235 | X-Ray Structure Alcohol Dehydrogenase From Archaeon | 2e-04 | ||
| 3tn7_A | 257 | Crystal Structure Of Short-Chain Alcohol Dehydrogen | 2e-04 | ||
| 2z1n_A | 260 | Crystal Structure Of Ape0912 From Aeropyrum Pernix | 2e-04 | ||
| 3kvo_A | 346 | Crystal Structure Of The Catalytic Domain Of Human | 2e-04 | ||
| 3tox_A | 280 | Crystal Structure Of A Short Chain Dehydrogenase In | 3e-04 | ||
| 3n74_A | 261 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 3e-04 | ||
| 1iy8_A | 267 | Crystal Structure Of Levodione Reductase Length = 2 | 3e-04 | ||
| 2bd0_A | 244 | Chlorobium Tepidum Sepiapterin Reductase Complexed | 3e-04 | ||
| 3v8b_A | 283 | Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro | 4e-04 | ||
| 1iol_A | 327 | Estrogenic 17-beta Hydroxysteroid Dehydrogenase Com | 4e-04 | ||
| 3ak4_A | 263 | Crystal Structure Of Nadh-Dependent Quinuclidinone | 4e-04 | ||
| 1zjy_A | 251 | Structure Of R-Specific Alcohol Dehydrogenase (Muta | 4e-04 | ||
| 1a27_A | 289 | Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C | 4e-04 | ||
| 3ay6_A | 269 | Crystal Structure Of Bacillus Megaterium Glucose De | 4e-04 | ||
| 3un1_A | 260 | Crystal Structure Of An Oxidoreductase From Sinorhi | 4e-04 | ||
| 3aus_A | 269 | Crystal Structure Of Bacillus Megaterium Glucose De | 5e-04 | ||
| 3ay7_A | 269 | Crystal Structure Of Bacillus Megaterium Glucose De | 5e-04 | ||
| 1fdu_A | 327 | Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 M | 5e-04 | ||
| 1fds_A | 327 | Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C | 6e-04 | ||
| 4e6p_A | 259 | Crystal Structure Of A Probable Sorbitol Dehydrogen | 6e-04 | ||
| 1equ_A | 327 | Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin | 6e-04 | ||
| 1fdw_A | 327 | Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 M | 6e-04 | ||
| 4da9_A | 280 | Crystal Structure Of Putative Short-Chain Dehydroge | 6e-04 | ||
| 2ag5_A | 246 | Crystal Structure Of Human Dhrs6 Length = 246 | 6e-04 | ||
| 3t7c_A | 299 | Crystal Structure Of Carveol Dehydrogenase From Myc | 6e-04 | ||
| 1hdc_A | 254 | Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste | 8e-04 |
| >pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254 | Back alignment and structure |
|
| >pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248 | Back alignment and structure |
|
| >pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267 | Back alignment and structure |
|
| >pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281 | Back alignment and structure |
|
| >pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280 | Back alignment and structure |
|
| >pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281 | Back alignment and structure |
|
| >pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277 | Back alignment and structure |
|
| >pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281 | Back alignment and structure |
|
| >pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261 | Back alignment and structure |
|
| >pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263 | Back alignment and structure |
|
| >pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281 | Back alignment and structure |
|
| >pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266 | Back alignment and structure |
|
| >pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263 | Back alignment and structure |
|
| >pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252 | Back alignment and structure |
|
| >pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278 | Back alignment and structure |
|
| >pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277 | Back alignment and structure |
|
| >pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281 | Back alignment and structure |
|
| >pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248 | Back alignment and structure |
|
| >pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251 | Back alignment and structure |
|
| >pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272 | Back alignment and structure |
|
| >pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242 | Back alignment and structure |
|
| >pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250 | Back alignment and structure |
|
| >pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297 | Back alignment and structure |
|
| >pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281 | Back alignment and structure |
|
| >pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303 | Back alignment and structure |
|
| >pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287 | Back alignment and structure |
|
| >pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244 | Back alignment and structure |
|
| >pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246 | Back alignment and structure |
|
| >pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271 | Back alignment and structure |
|
| >pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244 | Back alignment and structure |
|
| >pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247 | Back alignment and structure |
|
| >pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246 | Back alignment and structure |
|
| >pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249 | Back alignment and structure |
|
| >pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273 | Back alignment and structure |
|
| >pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246 | Back alignment and structure |
|
| >pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269 | Back alignment and structure |
|
| >pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292 | Back alignment and structure |
|
| >pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260 | Back alignment and structure |
|
| >pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259 | Back alignment and structure |
|
| >pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292 | Back alignment and structure |
|
| >pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244 | Back alignment and structure |
|
| >pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267 | Back alignment and structure |
|
| >pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226 | Back alignment and structure |
|
| >pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In Complex With Nadp And Carbenoxolone Length = 283 | Back alignment and structure |
|
| >pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Ether Inhibitor Length = 264 | Back alignment and structure |
|
| >pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In Complex With An Orally Bioavailable Acidic Inhibitor Azd4017. Length = 272 | Back alignment and structure |
|
| >pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of Tetrameric 11b-hsd1 Length = 286 | Back alignment and structure |
|
| >pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Sulfone Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase 1 (11b-Hsd1) In Complex With 4,4-Disubstituted Cyclohexylbenzamide Inhibitor Length = 273 | Back alignment and structure |
|
| >pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1 Inhibitors Length = 275 | Back alignment and structure |
|
| >pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270 | Back alignment and structure |
|
| >pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260 | Back alignment and structure |
|
| >pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272 | Back alignment and structure |
|
| >pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r, F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3- Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone Length = 286 | Back alignment and structure |
|
| >pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260 | Back alignment and structure |
|
| >pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase From Escherichia Coli Cft073 Length = 262 | Back alignment and structure |
|
| >pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261 | Back alignment and structure |
|
| >pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276 | Back alignment and structure |
|
| >pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293 | Back alignment and structure |
|
| >pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269 | Back alignment and structure |
|
| >pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247 | Back alignment and structure |
|
| >pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258 | Back alignment and structure |
|
| >pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248 | Back alignment and structure |
|
| >pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From E.Coli Length = 252 | Back alignment and structure |
|
| >pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With Pf-877423 Length = 263 | Back alignment and structure |
|
| >pdb|3G49|A Chain A, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of Pf-915275 Length = 277 | Back alignment and structure |
|
| >pdb|3DWF|A Chain A, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Mutant F278e Length = 276 | Back alignment and structure |
|
| >pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264 | Back alignment and structure |
|
| >pdb|1XSE|A Chain A, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Length = 295 | Back alignment and structure |
|
| >pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260 | Back alignment and structure |
|
| >pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281 | Back alignment and structure |
|
| >pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Reductase (Tm1169) From Thermotoga Maritima At 2.50 A Resolution Length = 249 | Back alignment and structure |
|
| >pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255 | Back alignment and structure |
|
| >pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262 | Back alignment and structure |
|
| >pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249 | Back alignment and structure |
|
| >pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247 | Back alignment and structure |
|
| >pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291 | Back alignment and structure |
|
| >pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266 | Back alignment and structure |
|
| >pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279 | Back alignment and structure |
|
| >pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285 | Back alignment and structure |
|
| >pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245 | Back alignment and structure |
|
| >pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273 | Back alignment and structure |
|
| >pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244 | Back alignment and structure |
|
| >pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244 | Back alignment and structure |
|
| >pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255 | Back alignment and structure |
|
| >pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256 | Back alignment and structure |
|
| >pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256 | Back alignment and structure |
|
| >pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein) Reductase (target Efi-506442) From Agrobacterium Tumefaciens C58 With Nadp Bound Length = 275 | Back alignment and structure |
|
| >pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264 | Back alignment and structure |
|
| >pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301 | Back alignment and structure |
|
| >pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I Length = 264 | Back alignment and structure |
|
| >pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid Dehydrogenase: An Important Therapeutic Target For Diabetes Length = 276 | Back alignment and structure |
|
| >pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247 | Back alignment and structure |
|
| >pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255 | Back alignment and structure |
|
| >pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260 | Back alignment and structure |
|
| >pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260 | Back alignment and structure |
|
| >pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260 | Back alignment and structure |
|
| >pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247 | Back alignment and structure |
|
| >pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239 | Back alignment and structure |
|
| >pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281 | Back alignment and structure |
|
| >pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276 | Back alignment and structure |
|
| >pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277 | Back alignment and structure |
|
| >pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256 | Back alignment and structure |
|
| >pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327 | Back alignment and structure |
|
| >pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317 | Back alignment and structure |
|
| >pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247 | Back alignment and structure |
|
| >pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262 | Back alignment and structure |
|
| >pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253 | Back alignment and structure |
|
| >pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266 | Back alignment and structure |
|
| >pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267 | Back alignment and structure |
|
| >pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249 | Back alignment and structure |
|
| >pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247 | Back alignment and structure |
|
| >pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256 | Back alignment and structure |
|
| >pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266 | Back alignment and structure |
|
| >pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272 | Back alignment and structure |
|
| >pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase, Complexed With Nadp+ At 2.6a Resolution Length = 252 | Back alignment and structure |
|
| >pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319 | Back alignment and structure |
|
| >pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273 | Back alignment and structure |
|
| >pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 In Complex With Nadp And Acetate. Length = 256 | Back alignment and structure |
|
| >pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277 | Back alignment and structure |
|
| >pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279 | Back alignment and structure |
|
| >pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254 | Back alignment and structure |
|
| >pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280 | Back alignment and structure |
|
| >pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454 | Back alignment and structure |
|
| >pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244 | Back alignment and structure |
|
| >pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269 | Back alignment and structure |
|
| >pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261 | Back alignment and structure |
|
| >pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250 | Back alignment and structure |
|
| >pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261 | Back alignment and structure |
|
| >pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261 | Back alignment and structure |
|
| >pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267 | Back alignment and structure |
|
| >pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261 | Back alignment and structure |
|
| >pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432 | Back alignment and structure |
|
| >pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462 | Back alignment and structure |
|
| >pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446 | Back alignment and structure |
|
| >pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475 | Back alignment and structure |
|
| >pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454 | Back alignment and structure |
|
| >pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294 | Back alignment and structure |
|
| >pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255 | Back alignment and structure |
|
| >pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291 | Back alignment and structure |
|
| >pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234 | Back alignment and structure |
|
| >pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271 | Back alignment and structure |
|
| >pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291 | Back alignment and structure |
|
| >pdb|3E9Q|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase From Shigella Flexneri Length = 273 | Back alignment and structure |
|
| >pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604 | Back alignment and structure |
|
| >pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247 | Back alignment and structure |
|
| >pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253 | Back alignment and structure |
|
| >pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274 | Back alignment and structure |
|
| >pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319 | Back alignment and structure |
|
| >pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613 | Back alignment and structure |
|
| >pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247 | Back alignment and structure |
|
| >pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260 | Back alignment and structure |
|
| >pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255 | Back alignment and structure |
|
| >pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251 | Back alignment and structure |
|
| >pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262 | Back alignment and structure |
|
| >pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265 | Back alignment and structure |
|
| >pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267 | Back alignment and structure |
|
| >pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286 | Back alignment and structure |
|
| >pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258 | Back alignment and structure |
|
| >pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270 | Back alignment and structure |
|
| >pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271 | Back alignment and structure |
|
| >pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235 | Back alignment and structure |
|
| >pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257 | Back alignment and structure |
|
| >pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1 Length = 260 | Back alignment and structure |
|
| >pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346 | Back alignment and structure |
|
| >pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280 | Back alignment and structure |
|
| >pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261 | Back alignment and structure |
|
| >pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267 | Back alignment and structure |
|
| >pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244 | Back alignment and structure |
|
| >pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283 | Back alignment and structure |
|
| >pdb|1IOL|A Chain A, Estrogenic 17-beta Hydroxysteroid Dehydrogenase Complexed 17-beta- Estradiol Length = 327 | Back alignment and structure |
|
| >pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263 | Back alignment and structure |
|
| >pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251 | Back alignment and structure |
|
| >pdb|1A27|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C-Terminal Deletion Mutant Complexed With Estradiol And Nadp+ Length = 289 | Back alignment and structure |
|
| >pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269 | Back alignment and structure |
|
| >pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260 | Back alignment and structure |
|
| >pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269 | Back alignment and structure |
|
| >pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269 | Back alignment and structure |
|
| >pdb|1FDU|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant H221l Complexed With Estradiol And Nadp+ Length = 327 | Back alignment and structure |
|
| >pdb|1FDS|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Complexed With 17- Beta-Estradiol Length = 327 | Back alignment and structure |
|
| >pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259 | Back alignment and structure |
|
| >pdb|1EQU|A Chain A, Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin Complexed With Nadp+ Length = 327 | Back alignment and structure |
|
| >pdb|1FDW|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant H221q Complexed With Estradiol Length = 327 | Back alignment and structure |
|
| >pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280 | Back alignment and structure |
|
| >pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6 Length = 246 | Back alignment and structure |
|
| >pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299 | Back alignment and structure |
|
| >pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230 | Back alignment and structure |
|---|
Score = 147 bits (374), Expect = 3e-43
Identities = 36/190 (18%), Positives = 71/190 (37%), Gaps = 17/190 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
++TG + G+G A G L GR+ KL V++ + D +
Sbjct: 4 IVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNV-----GYRARDLAS 58
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
++++ E++ ++++ G Y E D ++ LI+ N+ V
Sbjct: 59 HQEVEQLFEQLDSIPS-----TVVHSAGSG--YFGLLQEQDPEQIQTLIENNLSSAINVL 111
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
+ ++ + +V I S AA S Y A K + S+ +E + + +
Sbjct: 112 RELVKRYKDQ-PVNVVMIMSTAAQQ--PKAQESTYCAVKWAVKGLIESVRLELKGKPMKI 168
Query: 234 QCQVPLYVAT 243
P +AT
Sbjct: 169 IAVYPGGMAT 178
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207 | Back alignment and structure |
|---|
Score = 141 bits (357), Expect = 5e-41
Identities = 48/219 (21%), Positives = 90/219 (41%), Gaps = 22/219 (10%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
L+TG T G+G +FA L G +L+L GR L +++ + A+ + D +
Sbjct: 3 VLITGATGGLGGAFARALK--GHDLLLSGRRAGALAELAREVGARA-------LPADLA- 52
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
D + + + E LD+ L++ VG + E + L++ ++ ++
Sbjct: 53 D-ELEAKALLEEAGPLDL--LVHAVGKAGR--ASVREAGRDLVEEMLAAHLLTA----AF 103
Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
VL +K V G+ V P ++ YAA K ++ + + E + G+ +
Sbjct: 104 VLKHARFQKGARAVFFGAYPRYV--QVPGFAAYAAAKGALEAYLEAARKELLREGVHLVL 161
Query: 236 QVPLYVATKM-ASIKRSSFFVPSTDVYARAAMRWIGYEP 273
VAT + A + S + AR + + EP
Sbjct: 162 VRLPAVATGLWAPLGGPPKGALSPEEAARKVLEGLFREP 200
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259 | Back alignment and structure |
|---|
Score = 140 bits (355), Expect = 3e-40
Identities = 43/207 (20%), Positives = 81/207 (39%), Gaps = 14/207 (6%)
Query: 56 ALVTGPTDGIGKSFAFQLAKT---GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
++TG + G G++ A QLA+ G +++ R+ L+ + + + A+ ++ D
Sbjct: 9 CVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAAD 68
Query: 113 FS--GDLDEGVERIKEA--IEGLDVGVLINNVGISYPYAR-FFHEVDQVLLKNLIKVNVE 167
+ + ++E EGL +LINN ++ F + D + N +N+
Sbjct: 69 LGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLT 128
Query: 168 GTTKVTQAVLPGMLKRK--KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
+T L +VNI S A+ + +Y A KA D + L E
Sbjct: 129 SMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ--PYKGWGLYCAGKAARDMLYQVLAAE 186
Query: 226 YRKSGIDVQCQVPLYVATKMASIKRSS 252
+ V P + M + R +
Sbjct: 187 EP--SVRVLSYAPGPLDNDMQQLARET 211
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250 | Back alignment and structure |
|---|
Score = 138 bits (351), Expect = 1e-39
Identities = 49/197 (24%), Positives = 82/197 (41%), Gaps = 14/197 (7%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAK-TQIKSVVVDFS 114
A++TG + GIG A LA G +VL+ R+ L+ V D I + + +D +
Sbjct: 10 AIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDIT 69
Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARFFHEVDQVLLKNLIKVNVEGTT 170
D ++ I + +D+ L+N + + ++ +++NV
Sbjct: 70 DCTKADTEIKDIHQKYGAVDI--LVNAAAMFMDGSLSEPVDNFRKI-----MEINVIAQY 122
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
+ + V M +K G I N+ S AA +Y +TK + + SLY E G
Sbjct: 123 GILKTVTEIMKVQKNGYIFNVASRAAKYG--FADGGIYGSTKFALLGLAESLYRELAPLG 180
Query: 231 IDVQCQVPLYVATKMAS 247
I V P +V T MA
Sbjct: 181 IRVTTLCPGWVNTDMAK 197
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286 | Back alignment and structure |
|---|
Score = 137 bits (346), Expect = 1e-38
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 15/219 (6%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
+VTG + GIG+ A+ LAK G ++V+ R+ + L+ V A +
Sbjct: 31 VIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAA-SAHYIAGTMED 89
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
++ V + + + GLD +LI N + D ++ ++VN +T
Sbjct: 90 MTFAEQFVAQAGKLMGGLD--MLILNHITNTS--LNLFHDDIHHVRKSMEVNFLSYVVLT 145
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
A LP MLK+ G+IV + S A V + P+ + Y+A+K +D F S+ EY S ++V
Sbjct: 146 VAALP-MLKQSNGSIVVVSSLAGKV--AYPMVAAYSASKFALDGFFSSIRKEYSVSRVNV 202
Query: 234 Q--CQVPLYVATKMASIKRSSFFVP---STDVYARAAMR 267
V + T+ A S + A ++
Sbjct: 203 SITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIK 241
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 8e-38
Identities = 36/194 (18%), Positives = 76/194 (39%), Gaps = 14/194 (7%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
+VTG G+G++ L + G + ++GR +L+ + + +V D +
Sbjct: 6 IIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGN-----AVIGIVADLAH 60
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
D+D E + ++++ G ++ +++ N+ T V
Sbjct: 61 HEDVDVAFAAAVEWGGLPE--LVLHCAGTG--EFGPVGVYTAEQIRRVMESNLVSTILVA 116
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
Q + + + G + N+ S AA V S+Y A+K + F SL E + S + +
Sbjct: 117 QQTVRLI-GERGGVLANVLSSAAQV--GKANESLYCASKWGMRGFLESLRAELKDSPLRL 173
Query: 234 QCQVPLYVATKMAS 247
P + ++
Sbjct: 174 VNLYPSGIRSEFWD 187
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 6e-37
Identities = 56/190 (29%), Positives = 95/190 (50%), Gaps = 8/190 (4%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
ALVTG T GIGK+ A L G N+++ GR + + + I+A+Y ++ VV D
Sbjct: 13 ALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGT 72
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
++G + + E +D +LINN+GI + ++ L +VN+ ++T++
Sbjct: 73 --EQGCQDVIEKYPKVD--ILINNLGI--FEPVEYFDIPDEDWFKLFEVNIMSGVRLTRS 126
Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
L M++RK+G ++ I S AAI+ + Y+ATK SRSL + + V
Sbjct: 127 YLKKMIERKEGRVIFIASEAAIMPS--QEMAHYSATKTMQLSLSRSLAELTTGTNVTVNT 184
Query: 236 QVPLYVATKM 245
+P T+
Sbjct: 185 IMPGSTLTEG 194
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 6e-37
Identities = 47/197 (23%), Positives = 88/197 (44%), Gaps = 17/197 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
ALVTG + GIG + +LA G + RN +L + + + K ++ V D
Sbjct: 24 ALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVCDLLS 81
Query: 115 -GDLDEGVERIKEAIEG-LDVGVLINNVGISY--PYARFFHEV-DQVLLKNLIKVNVEGT 169
+ D+ ++ + +G L+ +L+NN G+ F + + + + N E
Sbjct: 82 RTERDKLMQTVAHVFDGKLN--ILVNNAGVVIHKEAKDFTEKDYNII-----MGTNFEAA 134
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
++Q P + + G ++ + S A + P S+Y+A+K I+Q ++SL E+ K
Sbjct: 135 YHLSQIAYPLLKASQNGNVIFLSSIAGFS--ALPSVSLYSASKGAINQMTKSLACEWAKD 192
Query: 230 GIDVQCQVPLYVATKMA 246
I V P + T +
Sbjct: 193 NIRVNSVAPGVILTPLV 209
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 8e-37
Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 10/196 (5%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGL---NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSV 109
L+TG + GIGK+ A + + L+L R +KL+++ +I ++ ++
Sbjct: 33 KKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVA 92
Query: 110 VVDFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVE 167
+D + + +E + + + +D+ L+NN G + R ++ ++++ NV
Sbjct: 93 QLDITQAEKIKPFIENLPQEFKDIDI--LVNNAGKALGSDRV-GQIATEDIQDVFDTNVT 149
Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
+TQAVLP + G IVN+GS A P S+Y A+K + F+ SL E
Sbjct: 150 ALINITQAVLPIFQAKNSGDIVNLGSIAGRDAY--PTGSIYCASKFAVGAFTDSLRKELI 207
Query: 228 KSGIDVQCQVPLYVAT 243
+ I V P V T
Sbjct: 208 NTKIRVILIAPGLVET 223
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 1e-36
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 17/197 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
ALVTG + GIG +LA G ++ RN +L D ++K ++++ V D S
Sbjct: 12 ALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVCDLSS 69
Query: 115 -GDLDEGVERIKEAIEG-LDVGVLINNVGISY--PYARFFHEV-DQVLLKNLIKVNVEGT 169
+ E + + G L+ +L+NN GI + E + + +N E
Sbjct: 70 RSERQELMNTVANHFHGKLN--ILVNNAGIVIYKEAKDYTVEDYSLI-----MSINFEAA 122
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
++ P + ++G +V I S + + + P +VY ATK +DQ +R L E+ K
Sbjct: 123 YHLSVLAHPFLKASERGNVVFISSVSGAL--AVPYEAVYGATKGAMDQLTRCLAFEWAKD 180
Query: 230 GIDVQCQVPLYVATKMA 246
I V P +AT +
Sbjct: 181 NIRVNGVGPGVIATSLV 197
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 6e-36
Identities = 50/198 (25%), Positives = 83/198 (41%), Gaps = 10/198 (5%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
ALVTG + GIG + A L + GL +V R +++++ ++ + D S
Sbjct: 35 ALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN 94
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
D+ I+ G+D + INN G++ P K++ VNV + T
Sbjct: 95 EEDILSMFSAIRSQHSGVD--ICINNAGLARP--DTLLSGSTSGWKDMFNVNVLALSICT 150
Query: 174 QAVLPGMLKRK--KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR--KS 229
+ M +R G I+NI S + + + Y+ATK + + L E R ++
Sbjct: 151 REAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQT 210
Query: 230 GIDVQCQVPLYVATKMAS 247
I C P V T+ A
Sbjct: 211 HIRATCISPGVVETQFAF 228
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 6e-36
Identities = 55/197 (27%), Positives = 99/197 (50%), Gaps = 13/197 (6%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAK-YAKTQIKSVVVDFS 114
++TG ++GIG++ A A+ G N+ + GR+ ++L++ I ++ Q+ SVV D +
Sbjct: 9 VIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVT 68
Query: 115 GDLDEGVER-IKEAIE---GLDVGVLINNVGISY--PYARFFHEVDQVLLKNLIKVNVEG 168
++G ++ I ++ +D VL+NN G + + + + +K+N++
Sbjct: 69 T--EDGQDQIINSTLKQFGKID--VLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQA 124
Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
++T+ V P L KG IVN+ S A P + YA KA +DQ++RS ++ K
Sbjct: 125 VIEMTKKVKP-HLVASKGEIVNVSSIVAGPQA-QPDFLYYAIAKAALDQYTRSTAIDLAK 182
Query: 229 SGIDVQCQVPLYVATKM 245
GI V P V T
Sbjct: 183 FGIRVNSVSPGMVETGF 199
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 8e-36
Identities = 50/194 (25%), Positives = 80/194 (41%), Gaps = 8/194 (4%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAK-TQIKSVVVDFS 114
LVTG GIGK A L G ++++VGRNPDKL ++A A I+ D +
Sbjct: 14 YLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDIT 73
Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
+ V+ + L +++ G S +VD + + +NV GT V
Sbjct: 74 NEDETARAVDAVTAWHGRLH--GVVHCAGGSENIGP-ITQVDSEAWRRTVDLNVNGTMYV 130
Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
+ M++ G+ V I S AA + + Y TK+ +D + E S +
Sbjct: 131 LKHAAREMVRGGGGSFVGISSIAASN--THRWFGAYGVTKSAVDHLMQLAADELGASWVR 188
Query: 233 VQCQVPLYVATKMA 246
V P + T +
Sbjct: 189 VNSIRPGLIRTDLV 202
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 1e-35
Identities = 44/196 (22%), Positives = 77/196 (39%), Gaps = 21/196 (10%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
+ GIG + +L K L ++ + +++ ++A K I D +
Sbjct: 8 VIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAE-LKAINPKVNITFHTYDVTV 66
Query: 116 DLDEGVERIKEAIE---GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
+ E + +K+ + +D +LIN GI H++++ I +N G
Sbjct: 67 PVAESKKLLKKIFDQLKTVD--ILINGAGILDD-----HQIERT-----IAINFTGLVNT 114
Query: 173 TQAVLPGMLKRKKG---AIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
T A+L KRK G I NI S + VY+A+KA + F+ SL +
Sbjct: 115 TTAILDFWDKRKGGPGGIIANICSVTGFN--AIHQVPVYSASKAAVVSFTNSLAKLAPIT 172
Query: 230 GIDVQCQVPLYVATKM 245
G+ P T +
Sbjct: 173 GVTAYSINPGITRTPL 188
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 2e-35
Identities = 44/194 (22%), Positives = 86/194 (44%), Gaps = 12/194 (6%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
A++TG + GIG++ A LA+ G L L R+ D+L+ ++ + + ++ +D S
Sbjct: 5 AVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQG-VEVFYHHLDVSK 63
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
++E +++ E +DV ++ N G+ Y + E+ + +I+VN+ G +
Sbjct: 64 AESVEEFSKKVLERFGDVDV--VVANAGLGYF--KRLEELSEEEFHEMIEVNLLGVWRTL 119
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
+A L + + A+V +A +IP Y +TK R+ +E +
Sbjct: 120 KAFLDSLKRTGGLALVTTSDVSARLIPY---GGGYVSTKWAARALVRTFQIE--NPDVRF 174
Query: 234 QCQVPLYVATKMAS 247
P V T
Sbjct: 175 FELRPGAVDTYFGG 188
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234 | Back alignment and structure |
|---|
Score = 126 bits (320), Expect = 3e-35
Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 14/194 (7%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
L+TG + GIG++ A L G + L+ R+ +L+ ++ ++ + D
Sbjct: 8 VLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALP------LPGDVRE 61
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
GD V ++EA L L+NN G+ + HE+ + ++ N+ G
Sbjct: 62 EGDWARAVAAMEEAFGELSA--LVNNAGVGV--MKPVHELTLEEWRLVLDTNLTGAFLGI 117
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
+ +P +L+R G IVN+GS A + Y A+K + + + ++ R++ + V
Sbjct: 118 RHAVPALLRRGGGTIVNVGSLAGKNPF--KGGAAYNASKFGLLGLAGAAMLDLREANVRV 175
Query: 234 QCQVPLYVATKMAS 247
+P V T A
Sbjct: 176 VNVLPGSVDTGFAG 189
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272 | Back alignment and structure |
|---|
Score = 127 bits (322), Expect = 3e-35
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 13/204 (6%)
Query: 43 LRPAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYA 102
L P + S +TG T G G++ A + A+ G +LVL GR ++L+ ++ + A
Sbjct: 13 LVPRGSHM--SSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELS---A 67
Query: 103 KTQIKSVVVDFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKN 160
KT++ + +D + V+ + E L LINN G++ D
Sbjct: 68 KTRVLPLTLDVRDRAAMSAAVDNLPEEFATLR--GLINNAGLALGTDP-AQSCDLDDWDT 124
Query: 161 LIKVNVEGTTKVTQAVLPGMLKRKKGA-IVNIGSGAAIVIPSDPLYSVYAATKAYIDQFS 219
++ N++G T+ +LP ++ GA IVN+GS A P VY TKA+++QFS
Sbjct: 125 MVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPY--PGSHVYGGTKAFVEQFS 182
Query: 220 RSLYVEYRKSGIDVQCQVPLYVAT 243
+L + + +G+ V P +
Sbjct: 183 LNLRCDLQGTGVRVTNLEPGLCES 206
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 4e-35
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 7/193 (3%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAK-TQIKSVVVDFS 114
++TG ++GIG+S A AK G + + GRN D+L++ I +I +VV D +
Sbjct: 29 VIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVT 88
Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
D+ + +D +L+NN G + + L + K+N + ++
Sbjct: 89 EASGQDDIINTTLAKFGKID--ILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEM 146
Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
TQ ++K KG IVN+ S A Y YA KA +DQ++R ++ + G+
Sbjct: 147 TQKTKEHLIKT-KGEIVNVSSIVAGPQA-HSGYPYYACAKAALDQYTRCTAIDLIQHGVR 204
Query: 233 VQCQVPLYVATKM 245
V P VAT
Sbjct: 205 VNSVSPGAVATGF 217
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252 | Back alignment and structure |
|---|
Score = 127 bits (320), Expect = 4e-35
Identities = 42/195 (21%), Positives = 73/195 (37%), Gaps = 14/195 (7%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
V G D IG A + A G + RN +KL + I+A A +I + +D
Sbjct: 10 VAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEA--AGGRIVARSLDAR- 66
Query: 116 DLDEGVERIKEAIE---GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
+ DE V A + L+ V I NVG + E + + + ++
Sbjct: 67 NEDE-VTAFLNAADAHAPLE--VTIFNVGANVN--FPILETTDRVFRKVWEMACWAGFVS 121
Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
+ ML +G I G+ A++ ++ +A+ K + ++S+ E I
Sbjct: 122 GRESARLMLAHGQGKIFFTGATASLRG--GSGFAAFASAKFGLRAVAQSMARELMPKNIH 179
Query: 233 VQCQV-PLYVATKMA 246
V + V T
Sbjct: 180 VAHLIIDSGVDTAWV 194
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 5e-35
Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 10/192 (5%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSV-VV 111
L+TG + GIG+ A +L G ++L R +++ ++ I+ + + V
Sbjct: 4 DKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVT 63
Query: 112 DFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
D + + + +D VL+NN G+ V + +I VN++G
Sbjct: 64 DRH-SVAAFAQAAVDTWGRID--VLVNNAGVM--PLSPLAAVKVDEWERMIDVNIKGVLW 118
Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
AVLP M ++ G I+NIGS A+ + P +VY ATK + S L E + I
Sbjct: 119 GIGAVLPIMEAQRSGQIINIGSIGALSVV--PTAAVYCATKFAVRAISDGLRQE--STNI 174
Query: 232 DVQCQVPLYVAT 243
V C P V +
Sbjct: 175 RVTCVNPGVVES 186
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263 | Back alignment and structure |
|---|
Score = 126 bits (320), Expect = 5e-35
Identities = 55/192 (28%), Positives = 92/192 (47%), Gaps = 9/192 (4%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
A++TG + GIG + A AK G ++VLV R D+L + + S++ K+ ++ V VD +
Sbjct: 10 AVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKF-GVRVLEVAVDVAT 68
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
+D VE ++ + G D+ L+NN G E + ++ V ++
Sbjct: 69 PEGVDAVVESVRSSFGGADI--LVNNAGT--GSNETIMEAADEKWQFYWELLVMAAVRLA 124
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
+ ++PGM R GAI++ S A+ +Y TKA + FS++L E K I V
Sbjct: 125 RGLVPGMRARGGGAIIHNASICAVQPL--WYEPIYNVTKAALMMFSKTLATEVIKDNIRV 182
Query: 234 QCQVPLYVATKM 245
C P + T
Sbjct: 183 NCINPGLILTPD 194
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260 | Back alignment and structure |
|---|
Score = 126 bits (320), Expect = 6e-35
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 7/192 (3%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
A+VTG IG + LA+ G +++ + + ++ + SVV+D +
Sbjct: 16 AIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDV--SSVVMDVTN 73
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
+ V + E +D+ L+ GI + ++ + +N+ G +
Sbjct: 74 TESVQNAVRSVHEQEGRVDI--LVACAGICISEVKA-EDMTDGQWLKQVDINLNGMFRSC 130
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
QAV ML++K+G IV IGS + +++ + Y A+KA + Q+ RSL E+ GI
Sbjct: 131 QAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRA 190
Query: 234 QCQVPLYVATKM 245
P Y+ T +
Sbjct: 191 NAVAPTYIETTL 202
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266 | Back alignment and structure |
|---|
Score = 126 bits (320), Expect = 7e-35
Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 15/199 (7%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
LVTG T GIG + + A G + RN +L + Q K Q+ V D
Sbjct: 14 AKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGF--QVTGSVCD 71
Query: 113 FS--GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARFFHE-VDQVLLKNLIKVNVE 167
S + ++ ++ + G + +LINN+G P + E I N+E
Sbjct: 72 ASLRPEREKLMQTVSSMF-GGKLDILINNLGAIRSKPTLDYTAEDFSFH-----ISTNLE 125
Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
++Q P + G I+ + S A +V S + S+Y+ATK ++Q +R+L E+
Sbjct: 126 SAYHLSQLAHPLLKASGCGNIIFMSSIAGVV--SASVGSIYSATKGALNQLARNLACEWA 183
Query: 228 KSGIDVQCQVPLYVATKMA 246
GI P +AT +A
Sbjct: 184 SDGIRANAVAPAVIATPLA 202
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 8e-35
Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
LVTG T G G+ + + G ++ GR ++L+++ D + + +D
Sbjct: 3 VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDN-----LYIAQLDVRN 57
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
++E + + +D+ L+NN G++ H+ + +I N +G +T
Sbjct: 58 RAAIEEMLASLPAEWCNIDI--LVNNAGLALGMEPA-HKASVEDWETMIDTNNKGLVYMT 114
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
+AVLPGM++R G I+NIGS A +VY ATKA++ QFS +L + + + V
Sbjct: 115 RAVLPGMVERNHGHIINIGSTAGSWPY--AGGNVYGATKAFVRQFSLNLRTDLHGTAVRV 172
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 1e-34
Identities = 69/259 (26%), Positives = 107/259 (41%), Gaps = 19/259 (7%)
Query: 44 RPAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAK 103
+ K++ G L+TG GIG+ A++ AK LVL N L++ + + AK
Sbjct: 24 KRRKSVT--GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAK 81
Query: 104 TQIKSVVVDFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNL 161
+ + VVD S D+ +++K I G DV +L+NN G+ Y ++
Sbjct: 82 --VHTFVVDCSNREDIYSSAKKVKAEI-G-DVSILVNNAGVVY--TSDLFATQDPQIEKT 135
Query: 162 IKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRS 221
+VNV T+A LP M K G IV + S A V S P Y ++K F ++
Sbjct: 136 FEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV--SVPFLLAYCSSKFAAVGFHKT 193
Query: 222 LYVE---YRKSGIDVQCQVPLYVATKMASIKRSSFFVP-STDVYARAAMRWI--GYEPCC 275
L E + +G+ C P +V T +S + M I +
Sbjct: 194 LTDELAALQITGVKTTCLCPNFVNTGFIKNPSTSLGPTLEPEEVVNRLMHGILTEQKMIF 253
Query: 276 TPYWPHSFIWGVLSILPEK 294
P F+ + ILPE
Sbjct: 254 IPSSIA-FLTTLERILPEG 271
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 2e-34
Identities = 44/194 (22%), Positives = 81/194 (41%), Gaps = 7/194 (3%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G A+VT + G+G + A +LA+ G L+L RN +KL+ + I + + Q+ V D
Sbjct: 7 GKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGD 66
Query: 113 FSGDLDEGVERIKEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
++R+ E L +L+ + G P F E+ ++
Sbjct: 67 IRE--PGDIDRLFEKARDLGGADILVYSTGG--PRPGRFMELGVEDWDESYRLLARSAVW 122
Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
V + M+++ G +V IGS + P L ++ + + R+L +E G+
Sbjct: 123 VGRRAAEQMVEKGWGRMVYIGSVTL-LRPWQDL-ALSNIMRLPVIGVVRTLALELAPHGV 180
Query: 232 DVQCQVPLYVATKM 245
V +P + T
Sbjct: 181 TVNAVLPSLILTDR 194
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 2e-34
Identities = 54/198 (27%), Positives = 84/198 (42%), Gaps = 17/198 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
A+VTG + GIG + A +L G +VL R+ +KL+ V I A A + +S D S
Sbjct: 32 AVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVA--AGGEAESHACDLSH 89
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFH----EVDQVLLKNLIKVNVEGT 169
+ + A DV L+NN G+ + E D + I VN++
Sbjct: 90 SDAIAAFATGVLAAHGRCDV--LVNNAGVGWFGGPLHTMKPAEWDAL-----IAVNLKAP 142
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
+ +A P M+ K+G I+NI S A + Y A+K ++ S E R+
Sbjct: 143 YLLLRAFAPAMIAAKRGHIINISSLAGKNP--VADGAAYTASKWGLNGLMTSAAEELRQH 200
Query: 230 GIDVQCQVPLYVATKMAS 247
+ V P V T+
Sbjct: 201 QVRVSLVAPGSVRTEFGV 218
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 2e-34
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 10/192 (5%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
+++G +G + A + A+ G +LVL R ++L+DV+ + + SV D +
Sbjct: 14 VVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRAL--SVGTDITD 71
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
+ V+ +A +D V+INN F +++ I++ V G ++
Sbjct: 72 DAQVAHLVDETMKAYGRVD--VVINNAFRVPSMKP-FANTTFEHMRDAIELTVFGALRLI 128
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
Q P + + KGA+VN+ S S Y Y K+ + S++L E + GI V
Sbjct: 129 QGFTPAL-EESKGAVVNVNSMVVRH--SQAKYGAYKMAKSALLAMSQTLATELGEKGIRV 185
Query: 234 QCQVPLYVATKM 245
+P Y+
Sbjct: 186 NSVLPGYIWGGT 197
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 2e-34
Identities = 49/192 (25%), Positives = 89/192 (46%), Gaps = 5/192 (2%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
ALVT TDGIG + A +LA+ G ++V+ R + + ++Q + V +
Sbjct: 17 ALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAE 76
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
D + V G+D +L++N ++ P+ + + + ++ VNV+ T +T+A
Sbjct: 77 DRERLVAMAVNLHGGVD--ILVSNAAVN-PFFGNIIDATEEVWDKILHVNVKATVLMTKA 133
Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
V+P M KR G+++ + S A P Y +K + +++L VE I V C
Sbjct: 134 VVPEMEKRGGGSVLIVSSVGAYH--PFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNC 191
Query: 236 QVPLYVATKMAS 247
P + T +
Sbjct: 192 LAPGLIKTNFSQ 203
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 5e-34
Identities = 38/195 (19%), Positives = 77/195 (39%), Gaps = 14/195 (7%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
A+VTG + GIG + L + G + R+ ++L+ +++ ++ ++ + V D
Sbjct: 11 AVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLD 70
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARFFHEV-DQVLLKNLIKVNVEGTT 170
+ E + + +L+NN G +A E + +++
Sbjct: 71 ALQVRAFAEACERTLGCAS--ILVNNAGQGRVSTFAETTDEAWSEE-----LQLKFFSVI 123
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
+A LP + R AIV + S A +P +A +A + RS+ E+ G
Sbjct: 124 HPVRAFLPQLESRADAAIVCVNSLLASQ--PEPHMVATSAARAGVKNLVRSMAFEFAPKG 181
Query: 231 IDVQCQVPLYVATKM 245
+ V + V +
Sbjct: 182 VRVNGILIGLVESGQ 196
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 6e-34
Identities = 54/195 (27%), Positives = 95/195 (48%), Gaps = 9/195 (4%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAK-YAKTQIKSVVVDFS 114
A++TG ++GIG++ A A+ G + + GR+ ++L++ I A ++ + SVV D +
Sbjct: 9 AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVT 68
Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARF--FHEVDQVLLKNLIKVNVEGTT 170
DE + LD +L+NN G + P ++ + +N+
Sbjct: 69 TDAGQDEILSTTLGKFGKLD--ILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVI 126
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
+T+ +P L KG IVNI S A+ + + P + Y+ KA IDQ++R+ ++ + G
Sbjct: 127 ALTKKAVP-HLSSTKGEIVNISSIASGLH-ATPDFPYYSIAKAAIDQYTRNTAIDLIQHG 184
Query: 231 IDVQCQVPLYVATKM 245
I V P VAT
Sbjct: 185 IRVNSISPGLVATGF 199
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247 | Back alignment and structure |
|---|
Score = 123 bits (312), Expect = 7e-34
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 11/200 (5%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G AL+TG + GIG++ A LA G + + R +KL+ + D + A A ++ + +D
Sbjct: 7 GKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTA--AGAKVHVLELD 64
Query: 113 FS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
+ +D V EA+ GLD +L+NN GI + D +I N+ G
Sbjct: 65 VADRQGVDAAVASTVEALGGLD--ILVNNAGIM--LLGPVEDADTTDWTRMIDTNLLGLM 120
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
+T+A LP + R KG +V + S A V +VY ATK ++ FS +L E + G
Sbjct: 121 YMTRAALPHL-LRSKGTVVQMSSIAGRVNV--RNAAVYQATKFGVNAFSETLRQEVTERG 177
Query: 231 IDVQCQVPLYVATKMASIKR 250
+ V P T++
Sbjct: 178 VRVVVIEPGTTDTELRGHIT 197
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 1e-33
Identities = 48/197 (24%), Positives = 80/197 (40%), Gaps = 16/197 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
++TG + GIG++ A + ++ G L+L+ R ++LK + VD +
Sbjct: 19 VVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL--------NLPNTLCAQVDVTD 70
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
D + R ++ D ++NN G+ + + + VNV G
Sbjct: 71 KYTFDTAITRAEKIYGPADA--IVNNAGMMLL--GQIDTQEANEWQRMFDVNVLGLLNGM 126
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
QAVL M R G I+NI S A P ++ Y TK + S ++ E S + V
Sbjct: 127 QAVLAPMKARNCGTIINISSIAGKKTF--PDHAAYCGTKFAVHAISENVREEVAASNVRV 184
Query: 234 QCQVPLYVATKMASIKR 250
P V T++ S
Sbjct: 185 MTIAPSAVKTELLSHTT 201
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 2e-33
Identities = 51/195 (26%), Positives = 76/195 (38%), Gaps = 14/195 (7%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
A+VTG G+G++ A LA G + L GR D L++ + I V D +
Sbjct: 31 AIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGD-----DALCVPTDVTD 85
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
+ E +D VL NN G P A ++ K ++ N+ G T
Sbjct: 86 PDSVRALFTATVEKFGRVD--VLFNNAGTGAP-AIPMEDLTFAQWKQVVDTNLTGPFLCT 142
Query: 174 QAVLPGMLKRKK--GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
Q M ++ G I+N GS +A P + Y ATK I ++S ++ R I
Sbjct: 143 QEAFRVMKAQEPRGGRIINNGSISATS--PRPYSAPYTATKHAITGLTKSTSLDGRVHDI 200
Query: 232 DVQCQVPLYVATKMA 246
T MA
Sbjct: 201 ACGQIDIGNADTPMA 215
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244 | Back alignment and structure |
|---|
Score = 121 bits (307), Expect = 3e-33
Identities = 48/202 (23%), Positives = 80/202 (39%), Gaps = 19/202 (9%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLN-------LVLVGRNPDKLKDVSDSIQAKYAKTQIKS 108
L+TG GIG++ A + A+ + LVL R L+ +S +A+ A T +
Sbjct: 5 LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTIT 64
Query: 109 VVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARF-FHEVDQVLLKNLIKVN 165
+ D+ I E +D L+NN G+ + + D + N
Sbjct: 65 ADISDMADVRRLTTHIVERYGHIDC--LVNNAGVGRFGALSDLTEEDFDYT-----MNTN 117
Query: 166 VEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
++GT +TQA+ M ++ G I I S AA S+Y +K ++ +
Sbjct: 118 LKGTFFLTQALFALMERQHSGHIFFITSVAATKA--FRHSSIYCMSKFGQRGLVETMRLY 175
Query: 226 YRKSGIDVQCQVPLYVATKMAS 247
RK + + P V T M
Sbjct: 176 ARKCNVRITDVQPGAVYTPMWG 197
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247 | Back alignment and structure |
|---|
Score = 121 bits (307), Expect = 3e-33
Identities = 45/195 (23%), Positives = 80/195 (41%), Gaps = 9/195 (4%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAK-YAKTQIKSVVVDFS 114
LVTG GIG + A A G ++VL+GR L +VSD I++ + I ++ ++ +
Sbjct: 17 ILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENA 76
Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
E R++ LD L++N I P ++ ++ VNV T +
Sbjct: 77 TAQQYRELAARVEHEFGRLD--GLLHNASIIGPRTP-LEQLPDEDFMQVMHVNVNATFML 133
Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR-KSGI 231
T+A+LP + + + +I S + Y +K + ++L E + +
Sbjct: 134 TRALLPLLKRSEDASIAFTSSSVGRK--GRANWGAYGVSKFATEGLMQTLADELEGVTAV 191
Query: 232 DVQCQVPLYVATKMA 246
P T M
Sbjct: 192 RANSINPGATRTGMR 206
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 3e-33
Identities = 52/196 (26%), Positives = 82/196 (41%), Gaps = 10/196 (5%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
ALVTG G+G+ A L+ G ++V+ GR PD L + I + +++VV D
Sbjct: 36 ALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTG-NIVRAVVCDVGD 94
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
+ ++ LD +L+NN G + P EV ++ N+ G T
Sbjct: 95 PDQVAALFAAVRAEFARLD--LLVNNAGSNVPPVP-LEEVTFEQWNGIVAANLTGAFLCT 151
Query: 174 QAVLPGMLKR--KKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
Q M + + G I+N GS +A P + Y ATK I ++S ++ R I
Sbjct: 152 QHAFRMMKAQTPRGGRIINNGSISAQT--PRPNSAPYTATKHAITGLTKSTALDGRMHDI 209
Query: 232 DVQCQVPLYVATKMAS 247
AT M +
Sbjct: 210 ACGQIDIGNAATDMTA 225
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252 | Back alignment and structure |
|---|
Score = 121 bits (307), Expect = 4e-33
Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 11/194 (5%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
LVTG +DGIG+ A A+ G ++L+GRN +KL+ V+ I + + Q + ++D
Sbjct: 15 ILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGR-QPQWFILDLLT 73
Query: 116 ----DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
+ + +RI LD +++N G+ E + + +++++VNV T
Sbjct: 74 CTSENCQQLAQRIAVNYPRLD--GVLHNAGLLGDVCP-MSEQNPQVWQDVMQVNVNATFM 130
Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
+TQA+LP +LK G++V S + YAA+K + + L EY + +
Sbjct: 131 LTQALLPLLLKSDAGSLVFTSSSVGRQ--GRANWGAYAASKFATEGMMQVLADEY-QQRL 187
Query: 232 DVQCQVPLYVATKM 245
V C P T M
Sbjct: 188 RVNCINPGGTRTAM 201
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 4e-33
Identities = 48/234 (20%), Positives = 86/234 (36%), Gaps = 22/234 (9%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
A VTG +G+G QL G + + D + +++A+ + ++ V +D +
Sbjct: 11 AFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVAS 70
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
+ ++ + +L NN G++ + E L+ VN+ G
Sbjct: 71 REGFKMAADEVEARFGPVS--ILCNNAGVN--LFQPIEESSYDDWDWLLGVNLHGVVNGV 126
Query: 174 QAVLPGMLKRKK------GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
+P M++R K G +VN S AA + + +Y TK + S SL+
Sbjct: 127 TTFVPRMVERVKAGEQKGGHVVNTASMAAFL--AAGSPGIYNTTKFAVRGLSESLHYSLL 184
Query: 228 KSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYAR--------AAMRWIGYEP 273
K I V P V + + + +V A + G EP
Sbjct: 185 KYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEP 238
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 5e-33
Identities = 49/194 (25%), Positives = 78/194 (40%), Gaps = 17/194 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVG--RNPDKLKDVSDSIQAKYAKTQIKSVVVDF 113
LVTG + GIGKS L + V+ G R+ LK + + + VV D
Sbjct: 5 ILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDR-----FFYVVGDI 59
Query: 114 S--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
+ L + V + +D L+ N G+ P +E+D K L +N
Sbjct: 60 TEDSVLKQLVNAAVKGHGKID--SLVANAGVLEPVQN-VNEIDVNAWKKLYDINFFSIVS 116
Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
+ LP LK+ G +V + S A + + Y ++KA ++ F+ +L E R +
Sbjct: 117 LVGIALP-ELKKTNGNVVFVSSDACNM--YFSSWGAYGSSKAALNHFAMTLANEER--QV 171
Query: 232 DVQCQVPLYVATKM 245
P V T M
Sbjct: 172 KAIAVAPGIVDTDM 185
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 8e-33
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 17/195 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
A VTG GIG A +G L+L+ R L + + A A +V D +
Sbjct: 14 AAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAA----RIVADVTD 69
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARFFHEV-DQVLLKNLIKVNVEGTT 170
+ EA+ + + L+N+ GI+ QV + VNV+G
Sbjct: 70 AEAMTAAAAEA-EAVAPVSI--LVNSAGIARLHDALETDDATWRQV-----MAVNVDGMF 121
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
++A M+ R GAIVN+GS + ++ S Y A+K + Q +R+L E+ G
Sbjct: 122 WASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRG 181
Query: 231 IDVQCQVPLYVATKM 245
+ V P YVAT+M
Sbjct: 182 VRVNALAPGYVATEM 196
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 1e-32
Identities = 54/191 (28%), Positives = 81/191 (42%), Gaps = 15/191 (7%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
ALVTG GIG+ L +G +V V R L ++ I+ V VD
Sbjct: 10 ALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG------IEPVCVDLG- 62
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
D D E+ I +D +L+NN + F EV + VN+ +V+Q
Sbjct: 63 DWDA-TEKALGGIGPVD--LLVNNAALVIMQP--FLEVTKEAFDRSFSVNLRSVFQVSQM 117
Query: 176 VLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQ 234
V M+ R G+IVN+ S A V + P Y++TK + ++++ +E I V
Sbjct: 118 VARDMINRGVPGSIVNVSSMVAHV--TFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVN 175
Query: 235 CQVPLYVATKM 245
P V T M
Sbjct: 176 SVNPTVVLTDM 186
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 2e-32
Identities = 54/191 (28%), Positives = 84/191 (43%), Gaps = 15/191 (7%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
LVTG GIG+ L TG +V V R L + I+ V VD
Sbjct: 10 VLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG------IEPVCVDLG- 62
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
D + ER ++ +D +L+NN ++ + F EV + +VN+ +V+Q
Sbjct: 63 DWEA-TERALGSVGPVD--LLVNNAAVALL--QPFLEVTKEAFDRSFEVNLRAVIQVSQI 117
Query: 176 VLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQ 234
V G++ R GAIVN+ S + + +SVY +TK +D ++ + +E I V
Sbjct: 118 VARGLIARGVPGAIVNVSSQCSQR--AVTNHSVYCSTKGALDMLTKVMALELGPHKIRVN 175
Query: 235 CQVPLYVATKM 245
P V T M
Sbjct: 176 AVNPTVVMTSM 186
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266 | Back alignment and structure |
|---|
Score = 119 bits (302), Expect = 2e-32
Identities = 59/196 (30%), Positives = 87/196 (44%), Gaps = 16/196 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
AL+TG T GIG A A G LVL GR+ +L ++ ++ + +V +D +
Sbjct: 23 ALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGT-DVHTVAIDLAE 81
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARFFHEV-DQVLLKNLIKVNVEGTT 170
E R EA GLD VL+NN GIS+ P ++ D I VN+
Sbjct: 82 PDAPAELARRAAEAFGGLD--VLVNNAGISHPQPVVDTDPQLFDAT-----IAVNLRAPA 134
Query: 171 KVTQAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
+ AV M+ + GAI+ + S AA+ P + Y +KA + ++ L E
Sbjct: 135 LLASAVGKAMVAAGEGGAIITVASAAALA--PLPDHYAYCTSKAGLVMATKVLARELGPH 192
Query: 230 GIDVQCQVPLYVATKM 245
GI P V T+M
Sbjct: 193 GIRANSVCPTVVLTEM 208
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 7e-32
Identities = 45/192 (23%), Positives = 77/192 (40%), Gaps = 9/192 (4%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
LVTG IG + A +LA+ G + L+ N + L+ S++ + +S V D +
Sbjct: 10 CLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVRE--KGVEARSYVCDVTS 67
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
+ V+ + +D L NN G +A + ++ +NV G V
Sbjct: 68 EEAVIGTVDSVVRDFGKIDF--LFNNAGYQGAFAPV-QDYPSDDFARVLTINVTGAFHVL 124
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
+AV M+ + G IVN S A + P + Y +K I + + ++ I V
Sbjct: 125 KAVSRQMITQNYGRIVNTASMAGVK--GPPNMAAYGTSKGAIIALTETAALDLAPYNIRV 182
Query: 234 QCQVPLYVATKM 245
P Y+
Sbjct: 183 NAISPGYMGPGF 194
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283 | Back alignment and structure |
|---|
Score = 118 bits (299), Expect = 9e-32
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 17/197 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
AL+TG GIG++ A LA G+ + +GR ++++V+D I A Q ++ D S
Sbjct: 31 ALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVG--AGGQAIALEADVSD 88
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEV-----DQVLLKNLIKVNVEG 168
+ V + LD+ ++ N GI+ +A ++ D+ I VN+ G
Sbjct: 89 ELQMRNAVRDLVLKFGHLDI--VVANAGINGVWAPI-DDLKPFEWDET-----IAVNLRG 140
Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
T +P + +R GAIV + S + P + Y ATKA + L +E K
Sbjct: 141 TFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGK 200
Query: 229 SGIDVQCQVPLYVATKM 245
I V P + T +
Sbjct: 201 HHIRVNAVCPGAIETNI 217
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255 | Back alignment and structure |
|---|
Score = 117 bits (297), Expect = 1e-31
Identities = 49/199 (24%), Positives = 78/199 (39%), Gaps = 23/199 (11%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
A++TG GIGK A A G ++V+ N D V D IQ + + D +
Sbjct: 14 AIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQA--FACRCDITS 71
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGIS------YPYARFFHEVDQVLLKNLIKVNVE 167
+L + + +D+ L+NN G P A F + ++NV
Sbjct: 72 EQELSALADFAISKLGKVDI--LVNNAGGGGPKPFDMPMADF----RRA-----YELNVF 120
Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
++Q V P M K G I+ I S AA + + YA++KA R++ +
Sbjct: 121 SFFHLSQLVAPEMEKNGGGVILTITSMAAEN--KNINMTSYASSKAAASHLVRNMAFDLG 178
Query: 228 KSGIDVQCQVPLYVATKMA 246
+ I V P + T
Sbjct: 179 EKNIRVNGIAPGAILTDAL 197
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 1e-31
Identities = 49/203 (24%), Positives = 84/203 (41%), Gaps = 26/203 (12%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
ALVTG + GIG+ A L + G + + R+ + D + + A +++ D S
Sbjct: 32 ALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG---DCQAIPADLSS 88
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARF----FHEVDQVLLKNLIKVNVE 167
+ + E LD +L+NN G S+ + + +V +++NV
Sbjct: 89 EAGARRLAQALGELSARLD--ILVNNAGTSWGAALESYPVSGWEKV--------MQLNVT 138
Query: 168 GTTKVTQAVLPGMLK----RKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLY 223
Q +LP + + ++NIGS A I + Y+ Y +KA + Q SR L
Sbjct: 139 SVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYA-YGPSKAALHQLSRMLA 197
Query: 224 VEYRKSGIDVQCQVPLYVATKMA 246
E I+V P ++M
Sbjct: 198 KELVGEHINVNVIAPGRFPSRMT 220
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 2e-31
Identities = 47/192 (24%), Positives = 77/192 (40%), Gaps = 7/192 (3%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
L+TG G+G++ A +LA G L LV + + L+ ++ ++ + V D S
Sbjct: 16 VLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD 75
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
++ V E +D NN GI ++ +N+ G
Sbjct: 76 EAQVEAYVTATTERFGRID--GFFNNAGIEGKQNP-TESFTAAEFDKVVSINLRGVFLGL 132
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
+ VL M ++ G +VN S I S YAA K + +R+ VEY + GI +
Sbjct: 133 EKVLKIMREQGSGMVVNTASVGGIR--GIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRI 190
Query: 234 QCQVPLYVATKM 245
P + T M
Sbjct: 191 NAIAPGAIWTPM 202
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 2e-31
Identities = 53/197 (26%), Positives = 81/197 (41%), Gaps = 22/197 (11%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
A+VTG + GIG + A L K G + + + + V ++ +V VD +
Sbjct: 15 AIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENG-----GFAVEVDVTK 69
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFH----EVDQVLLKNLIKVNVEGT 169
+D +++ +A+ G D +L N G+S E D VN G
Sbjct: 70 RASVDAAMQKAIDALGGFD--LLCANAGVS-TMRPAVDITDEEWDFN-----FDVNARGV 121
Query: 170 TKVTQAVLPGMLK-RKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
Q L KG IVN S AA V PL + Y+A+K + ++++L E
Sbjct: 122 FLANQIACRHFLASNTKGVIVNTASLAAKV--GAPLLAHYSASKFAVFGWTQALAREMAP 179
Query: 229 SGIDVQCQVPLYVATKM 245
I V C P +V T M
Sbjct: 180 KNIRVNCVCPGFVKTAM 196
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260 | Back alignment and structure |
|---|
Score = 116 bits (294), Expect = 3e-31
Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 15/198 (7%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
+VTG + GIG+ A QL K G + + GR+ D L+ V+ Q+ Q VV D S
Sbjct: 8 CVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQS--LGGQCVPVVCDSSQ 65
Query: 115 -GDLDEGVERI-KEAIEGLDVGVLINNVGISYPYARF-----FHEVDQVLLKNLIKVNVE 167
++ E++ +E LD VL+NN F E + ++ V +
Sbjct: 66 ESEVRSLFEQVDREQQGRLD--VLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLR 123
Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
G + M+ +G IV I S ++ + Y KA D+ + E R
Sbjct: 124 GHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMFNV---PYGVGKAACDKLAADCAHELR 180
Query: 228 KSGIDVQCQVPLYVATKM 245
+ G+ P V T++
Sbjct: 181 RHGVSCVSLWPGIVQTEL 198
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 4e-31
Identities = 47/200 (23%), Positives = 82/200 (41%), Gaps = 23/200 (11%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
AL+TG + GIGK A A+ G + + R+ D L+ V+D I K + D +
Sbjct: 35 ALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKA--LPIRCDVTQ 92
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGIS-------YPYARFFHEVDQVLLKNLIKVNV 166
+ ++++ + G+D+ + N GI P F ++ NV
Sbjct: 93 PDQVRGMLDQMTGELGGIDI--AVCNAGIVSVQAMLDMPLEEF----QRI-----QDTNV 141
Query: 167 EGTTKVTQAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
G QA M+ + G I+ S + +I S Y +KA + ++++ VE
Sbjct: 142 TGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVE 201
Query: 226 YRKSGIDVQCQVPLYVATKM 245
I V P Y+ T++
Sbjct: 202 LAPHQIRVNSVSPGYIRTEL 221
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 4e-31
Identities = 40/193 (20%), Positives = 80/193 (41%), Gaps = 16/193 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
A+VTG T G+G L++ + +GRNP+ L +++ + ++ +V
Sbjct: 8 AVVTGATGGMGIEIVKDLSRDH-IVYALGRNPEHLAALAEIEGVEPIESD----IVK--- 59
Query: 116 DLDEGVERIKEAIEGLD-VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
+ E + ++ LD V L++ ++ + +NV ++++
Sbjct: 60 --EVLEEGGVDKLKNLDHVDTLVHAAAVARD--TTIEAGSVAEWHAHLDLNVIVPAELSR 115
Query: 175 AVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQ 234
+LP + + G ++ I SGA P ++YAA+K + + + E +GI V
Sbjct: 116 QLLPAL-RAASGCVIYINSGAGNGP--HPGNTIYAASKHALRGLADAFRKEEANNGIRVS 172
Query: 235 CQVPLYVATKMAS 247
P T M
Sbjct: 173 TVSPGPTNTPMLQ 185
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 5e-31
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 18/200 (9%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKT---QIKSVVVD 112
A+VTG GIGK+ +L + G N+V+ R ++LK +D +QA T ++ + +
Sbjct: 21 AIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCN 80
Query: 113 FS--GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARF-FHEVDQVLLKNLIKVNVE 167
+++ V+ + ++ L+NN G + P V ++ N+
Sbjct: 81 IRNEEEVNNLVKSTLDTFGKIN--FLVNNGGGQFLSPAEHISSKGWHAV-----LETNLT 133
Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
GT + +AV +K G+IVNI PL A +A + ++SL +E+
Sbjct: 134 GTFYMCKAVYSSWMKEHGGSIVNI---IVPTKAGFPLAVHSGAARAGVYNLTKSLALEWA 190
Query: 228 KSGIDVQCQVPLYVATKMAS 247
SGI + C P + ++ A
Sbjct: 191 CSGIRINCVAPGVIYSQTAV 210
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 7e-31
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 20/198 (10%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
ALVTG + G+G A LA+ G ++V+ RN ++ + + + KY + + D S
Sbjct: 24 ALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGV-ETMAFRCDVSN 82
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARF----FHEVDQVLLKNLIKVNVE 167
++ + +E +KE LD ++N GI+ P F F +V I+VN+
Sbjct: 83 YEEVKKLLEAVKEKFGKLD--TVVNAAGINRRHPAEEFPLDEFRQV--------IEVNLF 132
Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
GT V + + + +I+NIGS + + P S YAA+K + +++L E+
Sbjct: 133 GTYYVCREAFSLLRESDNPSIINIGSLTVEEV-TMPNISAYAASKGGVASLTKALAKEWG 191
Query: 228 KSGIDVQCQVPLYVATKM 245
+ GI V P + TKM
Sbjct: 192 RYGIRVNVIAPGWYRTKM 209
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 7e-31
Identities = 44/198 (22%), Positives = 85/198 (42%), Gaps = 23/198 (11%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
A+VTG GIG++ A AK G ++V+ + + V+ +I+ A + + + +
Sbjct: 15 AIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQ--AGGKAIGLECNVTD 72
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGIS------YPYARFFHEVDQVLLKNLIKVNVE 167
+ ++ + + V L+NN G P + F + K+N+
Sbjct: 73 EQHREAVIKAALDQFGKITV--LVNNAGGGGPKPFDMPMSDF----EWA-----FKLNLF 121
Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
+++Q P M K GAI+NI S A ++ + Y ++KA ++ +R++ +
Sbjct: 122 SLFRLSQLAAPHMQKAGGGAILNISSMAGEN--TNVRMASYGSSKAAVNHLTRNIAFDVG 179
Query: 228 KSGIDVQCQVPLYVATKM 245
GI V P + T
Sbjct: 180 PMGIRVNAIAPGAIKTDA 197
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 1e-30
Identities = 35/192 (18%), Positives = 76/192 (39%), Gaps = 7/192 (3%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
A VTG + GIG + A A+ G ++ + + + + K+ + S
Sbjct: 37 ASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKT--YGVHSKAYKCNISD 94
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
++E + + ++ +DV + N G+++ + +I V++ G +
Sbjct: 95 PKSVEETISQQEKDFGTIDV--FVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCS 152
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
+ K KG+++ S + ++ L + Y KA ++SL +E+ V
Sbjct: 153 HNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAPFAR-V 211
Query: 234 QCQVPLYVATKM 245
P Y+ T +
Sbjct: 212 NTISPGYIDTDI 223
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 1e-30
Identities = 56/196 (28%), Positives = 96/196 (48%), Gaps = 16/196 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-PDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
A++TG T GIG + A LAK G N+VL G PD+++ V+D + + + D +
Sbjct: 28 AVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSS-GTVLHHPADMT 86
Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARFFHEV-DQVLLKNLIKVNVEGT 169
++ + + + + G D+ L+NN G+ + F E D++ I VN+ +
Sbjct: 87 KPSEIADMMAMVADRFGGADI--LVNNAGVQFVEKIEDFPVEQWDRI-----IAVNLSSS 139
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
+ +P M K+ G I+NI S +V + P S Y A K I ++++ +E +S
Sbjct: 140 FHTIRGAIPPMKKKGWGRIINIASAHGLV--ASPFKSAYVAAKHGIMGLTKTVALEVAES 197
Query: 230 GIDVQCQVPLYVATKM 245
G+ V P YV T +
Sbjct: 198 GVTVNSICPGYVLTPL 213
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239 | Back alignment and structure |
|---|
Score = 114 bits (289), Expect = 1e-30
Identities = 47/194 (24%), Positives = 78/194 (40%), Gaps = 21/194 (10%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
ALVTG + GIG++ A L G + + RNP++ + D
Sbjct: 5 ALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAA----------QSLGAVPLPTDLEK 54
Query: 115 GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARFFHEV-DQVLLKNLIKVNVEGTTK 171
D V+R EA+ GL V L++ ++ P +E +V + ++++
Sbjct: 55 DDPKGLVKRALEALGGLHV--LVHAAAVNVRKPALELSYEEWRRV-----LYLHLDVAFL 107
Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
+ QA P M + G ++ IGS Y K + +R+L E+ + GI
Sbjct: 108 LAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGI 167
Query: 232 DVQCQVPLYVATKM 245
V P YV T+
Sbjct: 168 RVNLLCPGYVETEF 181
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246 | Back alignment and structure |
|---|
Score = 114 bits (289), Expect = 1e-30
Identities = 45/190 (23%), Positives = 84/190 (44%), Gaps = 14/190 (7%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
++T GIG++ A A+ G ++ N KL+++ + + V+D +
Sbjct: 9 IILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQ-------TRVLDVTK 61
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
+ +++ +E LDV L N G + + ++ + +NV + +A
Sbjct: 62 K--KQIDQFANEVERLDV--LFNVAGFVHH--GTVLDCEEKDWDFSMNLNVRSMYLMIKA 115
Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
LP ML +K G I+N+ S A+ V VY+ TKA + ++S+ ++ + GI C
Sbjct: 116 FLPKMLAQKSGNIINMSSVASSVK-GVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNC 174
Query: 236 QVPLYVATKM 245
P V T
Sbjct: 175 VCPGTVDTPS 184
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 1e-30
Identities = 47/195 (24%), Positives = 86/195 (44%), Gaps = 11/195 (5%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
A+VTG GIG + A + A+ G LVL + L+ + ++ + VV D
Sbjct: 34 AVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGF--DAHGVVCDVRH 91
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
++ + + G+DV + +N GI A +++ + +I +++ G+
Sbjct: 92 LDEMVRLADEAFRLLGGVDV--VFSNAGIVV--AGPLAQMNHDDWRWVIDIDLWGSIHAV 147
Query: 174 QAVLPGMLKR-KKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
+A LP +L++ G I S A +V + Y K + + +L E + +GI
Sbjct: 148 EAFLPRLLEQGTGGHIAFTASFAGLV--PNAGLGTYGVAKYGVVGLAETLAREVKPNGIG 205
Query: 233 VQCQVPLYVATKMAS 247
V P+ V TK+ S
Sbjct: 206 VSVLCPMVVETKLVS 220
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256 | Back alignment and structure |
|---|
Score = 114 bits (289), Expect = 2e-30
Identities = 52/193 (26%), Positives = 85/193 (44%), Gaps = 11/193 (5%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
ALVTG GIGK+ A +L K G + + N K V+ I +V VD S
Sbjct: 5 ALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHA--VAVKVDVSD 62
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
+ VE+ ++ + G D V++NN G++ + ++ + +NV+G
Sbjct: 63 RDQVFAAVEQARKTLGGFD--VIVNNAGVAPS--TPIESITPEIVDKVYNINVKGVIWGI 118
Query: 174 QAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
QA + K G I+N S A V +P +VY+++K + +++ + GI
Sbjct: 119 QAAVEAFKKEGHGGKIINACSQAGHV--GNPELAVYSSSKFAVRGLTQTAARDLAPLGIT 176
Query: 233 VQCQVPLYVATKM 245
V P V T M
Sbjct: 177 VNGYCPGIVKTPM 189
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 2e-30
Identities = 26/197 (13%), Positives = 54/197 (27%), Gaps = 23/197 (11%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-PDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
ALVT G + L + G +V + D + + +
Sbjct: 4 ALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTI------ALAEQ 57
Query: 115 GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARF-FHEV-----DQVLLKNLIKVNVEG 168
+ V+ + E +D +++N I P R Q+ +
Sbjct: 58 -KPERLVDATLQHGEAIDT--IVSNDYIPRPMNRLPLEGTSEADIRQM-----FEALSIF 109
Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
+ Q+ + + +++ I S +Y +A S +
Sbjct: 110 PILLLQSAIAPLRAAGGASVIFITSSVGKK--PLAYNPLYGPARAATVALVESAAKTLSR 167
Query: 229 SGIDVQCQVPLYVATKM 245
GI + P +
Sbjct: 168 DGILLYAIGPNFFNNPT 184
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 2e-30
Identities = 43/200 (21%), Positives = 81/200 (40%), Gaps = 22/200 (11%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
A +TG G+GK L+ G V+ R D LK ++ I ++ ++ ++ D
Sbjct: 29 AFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGN-KVHAIQCDVRD 87
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARF----FHEVDQVLLKNLIKVNVE 167
+ V + + + ++INN ++ P R + + + +
Sbjct: 88 PDMVQNTVSELIKVAGHPN--IVINNAAGNFISPTERLSPNAWKTI--------TDIVLN 137
Query: 168 GTTKVTQAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
GT VT + ++K +K A ++I + A A+ KA ++ S+SL E+
Sbjct: 138 GTAFVTLEIGKQLIKAQKGAAFLSITTIYAET--GSGFVVPSASAKAGVEAMSKSLAAEW 195
Query: 227 RKSGIDVQCQVPLYVATKMA 246
K G+ P + TK A
Sbjct: 196 GKYGMRFNVIQPGPIKTKGA 215
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 2e-30
Identities = 51/204 (25%), Positives = 79/204 (38%), Gaps = 33/204 (16%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
ALVTG G+G ++A LA G ++L L + D++ K V D +
Sbjct: 12 ALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAH--GVAFDVTD 69
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARF----FHEVDQVLLKNLIKVNVE 167
++ ++ +D +LINN GI Y P + +V I N+
Sbjct: 70 ELAIEAAFSKLDAEGIHVD--ILINNAGIQYRKPMVELELENWQKV--------IDTNLT 119
Query: 168 GTTKVTQAVLPGMLKRKK-GAIVNIGS-----GAAIVIPSDPLYSVYAATKAYIDQFSRS 221
V+++ M+ R G I+NIGS V P Y A K I + S
Sbjct: 120 SAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAP-------YTAAKGGIKMLTCS 172
Query: 222 LYVEYRKSGIDVQCQVPLYVATKM 245
+ E+ + I P Y+ T M
Sbjct: 173 MAAEWAQFNIQTNAIGPGYILTDM 196
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 3e-30
Identities = 56/192 (29%), Positives = 84/192 (43%), Gaps = 9/192 (4%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
+VTG GIG++ A + A +V V D+L + ++ ++ V D S
Sbjct: 10 VIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRG--MGKEVLGVKADVSK 67
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
D++E V R E +DV L NN GI EV L + ++ VN+ +
Sbjct: 68 KKDVEEFVRRTFETYSRIDV--LCNNAGIMDGVTPV-AEVSDELWERVLAVNLYSAFYSS 124
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
+AV+P MLK+ KG IVN S A I + Y K + +RS+ Y GI
Sbjct: 125 RAVIPIMLKQGKGVIVNTASIAGIR--GGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRA 182
Query: 234 QCQVPLYVATKM 245
+P V T +
Sbjct: 183 VAVLPGTVKTNI 194
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 4e-30
Identities = 46/193 (23%), Positives = 79/193 (40%), Gaps = 21/193 (10%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
LV + GIG++ A L++ G + + RN + LK
Sbjct: 19 DKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVV------------- 65
Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
DL + ++ + E ++ +D +L+ N G P A FF E+ K I K+
Sbjct: 66 --CDLRKDLDLLFEKVKEVD--ILVLNAGG--PKAGFFDELTNEDFKEAIDSLFLNMIKI 119
Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
+ LP M ++ G IV I S +++ P + L + + + F ++L E GI
Sbjct: 120 VRNYLPAMKEKGWGRIVAITS-FSVISPIENL-YTSNSARMALTGFLKTLSFEVAPYGIT 177
Query: 233 VQCQVPLYVATKM 245
V C P + T+
Sbjct: 178 VNCVAPGWTETER 190
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 6e-30
Identities = 50/192 (26%), Positives = 78/192 (40%), Gaps = 15/192 (7%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
A++TG T GIG + A + G + + GR D L I + D +
Sbjct: 32 AVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGG-----AVGIQADSAN 86
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
+LD E++K +D VL N G EV + + NV+G
Sbjct: 87 LAELDRLYEKVKAEAGRID--VLFVNAGG-GSMLP-LGEVTEEQYDDTFDRNVKGVLFTV 142
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
Q LP + + ++V GS A P +SVYAA+KA + F+R+ ++ + GI +
Sbjct: 143 QKALPLL--ARGSSVVLTGSTAGST--GTPAFSVYAASKAALRSFARNWILDLKDRGIRI 198
Query: 234 QCQVPLYVATKM 245
P T
Sbjct: 199 NTLSPGPTETTG 210
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 8e-30
Identities = 43/197 (21%), Positives = 74/197 (37%), Gaps = 31/197 (15%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK-------DVSDSIQAKYAKTQIKS 108
ALVTG GIG + L G + + R + D+ ++
Sbjct: 31 ALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLHLPGDLREA------------ 78
Query: 109 VVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEG 168
D + + LD+ ++NN G+ E + VNVE
Sbjct: 79 ------AYADGLPGAVAAGLGRLDI--VVNNAGVISR--GRITETTDADWSLSLGVNVEA 128
Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
++ +A +P M GAIVN+ S + P +++Y TKA + ++ + +++
Sbjct: 129 PFRICRAAIPLMAAAGGGAIVNVASCWGLR--PGPGHALYCLTKAALASLTQCMGMDHAP 186
Query: 229 SGIDVQCQVPLYVATKM 245
GI + P V T M
Sbjct: 187 QGIRINAVCPNEVNTPM 203
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259 | Back alignment and structure |
|---|
Score = 112 bits (284), Expect = 1e-29
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 14/193 (7%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
AL+TG GIG++FA + G + + + ++ + + I +V +D +
Sbjct: 11 ALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPA-----AYAVQMDVTR 65
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
+D + E GLD +L+NN + E+ + + L +NV GT
Sbjct: 66 QDSIDAAIAATVEHAGGLD--ILVNNAALFDL--APIVEITRESYEKLFAINVAGTLFTL 121
Query: 174 QAVLPGMLKR-KKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
QA M+ + + G I+N+ S A + L ++Y ATKA + ++S ++ K I+
Sbjct: 122 QAAARQMIAQGRGGKIINMASQAGRR--GEALVAIYCATKAAVISLTQSAGLDLIKHRIN 179
Query: 233 VQCQVPLYVATKM 245
V P V +
Sbjct: 180 VNAIAPGVVDGEH 192
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 1e-29
Identities = 42/192 (21%), Positives = 72/192 (37%), Gaps = 8/192 (4%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
A+VTG + GIG++ A A+ G +V+ RN + L +++D I + ++ D
Sbjct: 11 AIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAG--GGGEAAALAGDVGD 68
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
+ VE GLD NN G + + + N+
Sbjct: 69 EALHEALVELAVRRFGGLD--TAFNNAGALGAMGE-ISSLSVEGWRETLDTNLTSAFLAA 125
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
+ +P + G++ S + YAA+KA + ++L VE GI V
Sbjct: 126 KYQVPAIAALGGGSLTFTSSFVGHTA-GFAGVAPYAASKAGLIGLVQALAVELGARGIRV 184
Query: 234 QCQVPLYVATKM 245
+P T
Sbjct: 185 NALLPGGTDTPA 196
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258 | Back alignment and structure |
|---|
Score = 112 bits (283), Expect = 1e-29
Identities = 47/199 (23%), Positives = 76/199 (38%), Gaps = 23/199 (11%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
ALVTG + G+GK+ A +LA+ G N+V+ R+ + ++ I+ K V +
Sbjct: 7 ALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKV--LVVKANVG 64
Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARF----FHEVDQVLLKNLIKVNV 166
+ E ++I E LDV +NN P + + +N
Sbjct: 65 QPAKIKEMFQQIDETFGRLDV--FVNNAASGVLRPVMELEETHWDWT--------MNINA 114
Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
+ Q M K G IV+I S +I Y+ +KA ++ +R L VE
Sbjct: 115 KALLFCAQEAAKLMEKNGGGHIVSISSLGSIR--YLENYTTVGVSKAALEALTRYLAVEL 172
Query: 227 RKSGIDVQCQVPLYVATKM 245
I V + T
Sbjct: 173 SPKQIIVNAVSGGAIDTDA 191
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 1e-29
Identities = 38/199 (19%), Positives = 72/199 (36%), Gaps = 21/199 (10%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
A +TG GIG A + G + V+ R+ ++ + + + + +D
Sbjct: 30 AFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATG-RRCLPLSMDVRA 88
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARF----FHEVDQVLLKNLIKVNVE 167
+ V++ + +D +LIN ++ P F V + ++
Sbjct: 89 PPAVMAAVDQALKEFGRID--ILINCAAGNFLCPAGALSFNAFKTV--------MDIDTS 138
Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
GT V++ + + G IVNI + L + KA +D +R L VE+
Sbjct: 139 GTFNVSRVLYEKFFRDHGGVIVNITATLGNR--GQALQVHAGSAKAAVDAMTRHLAVEWG 196
Query: 228 KSGIDVQCQVPLYVATKMA 246
I V P ++
Sbjct: 197 PQNIRVNSLAPGPISGTEG 215
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 1e-29
Identities = 56/200 (28%), Positives = 80/200 (40%), Gaps = 26/200 (13%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
+VTG GIG+++A LA+ G +V+ N + + V+ I A SV VD S
Sbjct: 12 GIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTA--ISVAVDVSD 69
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVNV 166
+R G+D L+NN I LL + VN+
Sbjct: 70 PESAKAMADRTLAEFGGIDY--LVNNAAIFGGMK------LDFLLTIDPEYYKKFMSVNL 121
Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV-YAATKAYIDQFSRSLYVE 225
+G T+AV M KR GAIVN S AA + YS Y K I+ ++ L E
Sbjct: 122 DGALWCTRAVYKKMTKRGGGAIVNQSSTAAWL------YSNYYGLAKVGINGLTQQLSRE 175
Query: 226 YRKSGIDVQCQVPLYVATKM 245
I + P + T+
Sbjct: 176 LGGRNIRINAIAPGPIDTEA 195
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 2e-29
Identities = 53/196 (27%), Positives = 85/196 (43%), Gaps = 16/196 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-PDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
A+VTG T GIG A LA G ++VL G +++ V + A++ ++ D S
Sbjct: 7 AVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHG-VKVLYDGADLS 65
Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARFFHEV-DQVLLKNLIKVNVEGT 169
+ V+ + +D+ L+NN GI + F E D + + +N+
Sbjct: 66 KGEAVRGLVDNAVRQMGRIDI--LVNNAGIQHTALIEDFPTEKWDAI-----LALNLSAV 118
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
T A LP M K+ G I+NI S +V + S Y A K + F++ +E
Sbjct: 119 FHGTAAALPHMKKQGFGRIINIASAHGLV--ASANKSAYVAAKHGVVGFTKVTALETAGQ 176
Query: 230 GIDVQCQVPLYVATKM 245
GI P +V T +
Sbjct: 177 GITANAICPGWVRTPL 192
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 2e-29
Identities = 45/194 (23%), Positives = 81/194 (41%), Gaps = 19/194 (9%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
A+V G T G+G + +L + G ++L GRN + + + + + ++ D +
Sbjct: 11 AIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPR-----VHALRSDIAD 65
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARF--FHEVDQVLLKNLIKVNVEGTTK 171
++ + + +D +L N G+ + F +V + VN +G
Sbjct: 66 LNEIAVLGAAAGQTLGAID--LLHINAGV----SELEPFDQVSEASYDRQFAVNTKGAFF 119
Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
Q + P + R+ G+IV S A P SVY+A+KA + F+ L E GI
Sbjct: 120 TVQRLTPLI--REGGSIVFTSSVADEG--GHPGMSVYSASKAALVSFASVLAAELLPRGI 175
Query: 232 DVQCQVPLYVATKM 245
V P ++ T
Sbjct: 176 RVNSVSPGFIDTPT 189
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 2e-29
Identities = 51/200 (25%), Positives = 81/200 (40%), Gaps = 22/200 (11%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
A VTG + GIG + A LA G+ + R+ + D ++A S V +
Sbjct: 27 AFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTD 86
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVNVEG 168
++ V E + +L+N+ G + +++ N+ G
Sbjct: 87 EVHAAVAAAVERFGPIG--ILVNSAGRN---------GGGETADLDDALWADVLDTNLTG 135
Query: 169 TTKVTQAVLP--GMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
+VT+ VL GM + G IVNI S + Y A+K + F++S+ E
Sbjct: 136 VFRVTREVLRAGGMREAGWGRIVNIASTGGKQ--GVMYAAPYTASKHGVVGFTKSVGFEL 193
Query: 227 RKSGIDVQCQVPLYVATKMA 246
K+GI V P YV T MA
Sbjct: 194 AKTGITVNAVCPGYVETPMA 213
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257 | Back alignment and structure |
|---|
Score = 111 bits (281), Expect = 3e-29
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 18/198 (9%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
++TG + G+GK A + AK G +V+ GR +KL++ I+ QI +V +D
Sbjct: 9 VIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQ--FPGQILTVQMDVRN 66
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARF-FHEVDQVLLKNLIKVNVEGTT 170
D+ + +E+I E +D +LINN ++ P + + V I + + GT
Sbjct: 67 TDDIQKMIEQIDEKFGRID--ILINNAAGNFICPAEDLSVNGWNSV-----INIVLNGTF 119
Query: 171 KVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY-RK 228
+QA+ +++ KG I+N+ + A P AA KA + +++L VE+ RK
Sbjct: 120 YCSQAIGKYWIEKGIKGNIINMVATYA-WDAG-PGVIHSAAAKAGVLAMTKTLAVEWGRK 177
Query: 229 SGIDVQCQVPLYVATKMA 246
GI V P +
Sbjct: 178 YGIRVNAIAPGPIERTGG 195
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277 | Back alignment and structure |
|---|
Score = 111 bits (281), Expect = 3e-29
Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 13/192 (6%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
+VTG GIG++ A AK G +V+ N D V++ I +K V VD S
Sbjct: 30 CIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSK-----AFGVRVDVSS 84
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
D + VE+ +DV L+NN G + + ++ VNV+G +
Sbjct: 85 AKDAESMVEKTTAKWGRVDV--LVNNAGFGTT--GNVVTIPEETWDRIMSVNVKGIFLCS 140
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
+ V+P M + G+I+N S A + + Y A+K I +R++ +++ K GI V
Sbjct: 141 KYVIPVMRRNGGGSIINTTSYTATS--AIADRTAYVASKGAISSLTRAMAMDHAKEGIRV 198
Query: 234 QCQVPLYVATKM 245
P + +
Sbjct: 199 NAVAPGTIDSPY 210
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 5e-29
Identities = 48/195 (24%), Positives = 81/195 (41%), Gaps = 15/195 (7%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI--QAKYAKTQIKSVVVDF 113
A++TG GIG + LA+ G +VL L + S+ A + VVD
Sbjct: 14 AIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVH-------HVVDL 66
Query: 114 S--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
+ + ++ + LD+ + NN S P ++ + + VN GT
Sbjct: 67 TNEVSVRALIDFTIDTFGRLDI--VDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTML 124
Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
+ + +P ++ GAIVNI S A + + + YA TKA I+ +R + +Y + G+
Sbjct: 125 MCKYAIPRLISAGGGAIVNISSATAHA--AYDMSTAYACTKAAIETLTRYVATQYGRHGV 182
Query: 232 DVQCQVPLYVATKMA 246
P V T
Sbjct: 183 RCNAIAPGLVRTPRL 197
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 9e-29
Identities = 53/195 (27%), Positives = 80/195 (41%), Gaps = 18/195 (9%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
ALVTG T GIG A LA+ G N+VL G I + D S
Sbjct: 7 ALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPA--PALAEIAR--HGVKAVHHPADLSD 62
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARFFHEV-DQVLLKNLIKVNVEGTT 170
++ + G+D+ L+NN GI + P +F E D++ I +N+
Sbjct: 63 VAQIEALFALAEREFGGVDI--LVNNAGIQHVAPVEQFPLESWDKI-----IALNLSAVF 115
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
T+ LPGM R G I+NI S +V + Y A K + ++ + +E S
Sbjct: 116 HGTRLALPGMRARNWGRIINIASVHGLV--GSTGKAAYVAAKHGVVGLTKVVGLETATSN 173
Query: 231 IDVQCQVPLYVATKM 245
+ P +V T +
Sbjct: 174 VTCNAICPGWVLTPL 188
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260 | Back alignment and structure |
|---|
Score = 109 bits (276), Expect = 1e-28
Identities = 49/198 (24%), Positives = 76/198 (38%), Gaps = 29/198 (14%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
++TG + GIG +V R+ A I +V D S
Sbjct: 31 VVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPS-----------ADPDIHTVAGDISK 79
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEV-----DQVLLKNLIKVNVEG 168
D V E +D L+NN G+ + F E+ D + VNV G
Sbjct: 80 PETADRIVREGIERFGRIDS--LVNNAGVFLA--KPFVEMTQEDYDHN-----LGVNVAG 130
Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIV-IPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
+TQ MLK+ G IV+I + + P + + TK ++ +RSL +E+
Sbjct: 131 FFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSA-LASLTKGGLNAVTRSLAMEFS 189
Query: 228 KSGIDVQCQVPLYVATKM 245
+SG+ V P + T M
Sbjct: 190 RSGVRVNAVSPGVIKTPM 207
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258 | Back alignment and structure |
|---|
Score = 109 bits (276), Expect = 1e-28
Identities = 54/195 (27%), Positives = 85/195 (43%), Gaps = 13/195 (6%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLV--GRNPDKLKDVSDSIQAKYAKTQIKSVVVDF 113
A+VTG GIG+ + +LA G ++ + + ++ + I+A K V +D
Sbjct: 5 AMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKA--VFVGLDV 62
Query: 114 S--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
+ + D ++ E + G D VL+NN GI+ + EV + LK + VNV
Sbjct: 63 TDKANFDSAIDEAAEKLGGFD--VLVNNAGIAQI--KPLLEVTEEDLKQIYSVNVFSVFF 118
Query: 172 VTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
QA + KG I+N S AAI P+ S Y+ TK + +++ E G
Sbjct: 119 GIQAASRKFDELGVKGKIINAASIAAIQ--GFPILSAYSTTKFAVRGLTQAAAQELAPKG 176
Query: 231 IDVQCQVPLYVATKM 245
V P V T M
Sbjct: 177 HTVNAYAPGIVGTGM 191
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 2e-28
Identities = 47/197 (23%), Positives = 84/197 (42%), Gaps = 21/197 (10%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
ALVTG GIG++FA L G + LV N + ++ ++ + + D +
Sbjct: 10 ALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD 69
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
L + ++ + LD +L+NN G++ + ++ +++N+ T
Sbjct: 70 QQQLRDTFRKVVDHFGRLD--ILVNNAGVNNE-KNW----EKT-----LQINLVSVISGT 117
Query: 174 QAVLPGMLKRKKG---AIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRS--LYVEYRK 228
L M K+ G I+N+ S A ++ VY A+K I F+RS L
Sbjct: 118 YLGLDYMSKQNGGEGGIIINMSSLAGLM--PVAQQPVYCASKHGIVGFTRSAALAANLMN 175
Query: 229 SGIDVQCQVPLYVATKM 245
SG+ + P +V T +
Sbjct: 176 SGVRLNAICPGFVNTAI 192
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 2e-28
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 26/200 (13%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
ALVTG + GIG A LA G +V + + +S++ K K + +V++ S
Sbjct: 8 ALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFK--ARGLVLNISD 65
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVNV 166
+ IK +D +L+NN GI+ R D ++++ ++I N+
Sbjct: 66 IESIQNFFAEIKAENLAID--ILVNNAGIT----R-----DNLMMRMSEDEWQSVINTNL 114
Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV-IPSDPLYSVYAATKAYIDQFSRSLYVE 225
++++ + GM+K++ G I++IGS +V +P + Y A KA + FS+SL E
Sbjct: 115 SSIFRMSKECVRGMMKKRWGRIISIGS---VVGSAGNPGQTNYCAAKAGVIGFSKSLAYE 171
Query: 226 YRKSGIDVQCQVPLYVATKM 245
I V P ++AT M
Sbjct: 172 VASRNITVNVVAPGFIATDM 191
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 2e-28
Identities = 56/193 (29%), Positives = 91/193 (47%), Gaps = 8/193 (4%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
A+VTG + G G + A + G + + + + L++ + + YA ++ V D +
Sbjct: 5 AIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYA-DKVLRVRADVAD 63
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYAR-FFHEVDQVLLKNLIKVNVEGTTKV 172
GD++ + E +DV L+NN GI+ H ++ VNV G
Sbjct: 64 EGDVNAAIAATMEQFGAIDV--LVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLG 121
Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
+AVLP ML + G IVNI S A++V + P S Y +K + Q ++S+ V+Y SGI
Sbjct: 122 CRAVLPHMLLQGAGVIVNIASVASLV--AFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIR 179
Query: 233 VQCQVPLYVATKM 245
P + T M
Sbjct: 180 CNAVCPGMIETPM 192
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 3e-28
Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 26/202 (12%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
ALVTG T GIG A +L K GL + + R + L+ ++ A + D
Sbjct: 25 ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE--AGVEADGRTCDVRS 82
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVNV 166
+++ V + E +D VL+NN G + ++++ N+
Sbjct: 83 VPEIEALVAAVVERYGPVD--VLVNNAGRP----G-----GGATAELADELWLDVVETNL 131
Query: 167 EGTTKVTQAVLP--GMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYV 224
G +VT+ VL GML+R G IVNI S + Y+A+K + F+++L +
Sbjct: 132 TGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQ--GVVHAAPYSASKHGVVGFTKALGL 189
Query: 225 EYRKSGIDVQCQVPLYVATKMA 246
E ++GI V P +V T MA
Sbjct: 190 ELARTGITVNAVCPGFVETPMA 211
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 3e-28
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 15/213 (7%)
Query: 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
W LVTG + G G++ A G ++ R + L D+ + +++ +D +
Sbjct: 8 W-LVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDL-----VAAYPDRAEAISLDVT 61
Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
+D + +DV L+NN G F E + L++L +++V G ++
Sbjct: 62 DGERIDVVAADVLARYGRVDV--LVNNAG--RTQVGAFEETTERELRDLFELHVFGPARL 117
Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
T+A+LP M +R G++VNI S + S +S Y+ATKA ++Q S L E GI
Sbjct: 118 TRALLPQMRERGSGSVVNISSFGGQL--SFAGFSAYSATKAALEQLSEGLADEVAPFGIK 175
Query: 233 VQCQVPLYVATKMASIKRSSFFVPSTDVYARAA 265
V P T + K +++F YA
Sbjct: 176 VLIVEPGAFRTNLFG-KGAAYFSEENPAYAEKV 207
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 3e-28
Identities = 56/201 (27%), Positives = 86/201 (42%), Gaps = 30/201 (14%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
A+VTG GIG++ A A+ G +++ GR D +K+V+D I + VV D +
Sbjct: 34 AVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGSAEA--VVADLAD 90
Query: 116 DLDEGVERIKEAIE---GLDVGVLINNVGISY--PYARFFHEV-DQVLLKNLIKVNVEGT 169
EG + E + +DV L+NN GI P +V + VN++
Sbjct: 91 L--EGAANVAEELAATRRVDV--LVNNAGIIARAPAEEVSLGRWREV-----LTVNLDAA 141
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGS-----GAAIVIPSDPLYSVYAATKAYIDQFSRSLYV 224
++++ ML G IV I S G V YAA+K + +R+L
Sbjct: 142 WVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAA-------YAASKHAVVGLTRALAS 194
Query: 225 EYRKSGIDVQCQVPLYVATKM 245
E+ G+ V P YV T
Sbjct: 195 EWAGRGVGVNALAPGYVVTAN 215
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 3e-28
Identities = 47/215 (21%), Positives = 83/215 (38%), Gaps = 10/215 (4%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKT---QIKSVVVD 112
L+TG + G G+ A LA G + R+ + A +A+ ++++ +D
Sbjct: 8 ILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELD 67
Query: 113 FS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
+D +++I +DV LI+N G + L +NV T
Sbjct: 68 VQSQVSVDRAIDQIIGEDGRIDV--LIHNAG--HMVFGPAEAFTPEQFAELYDINVLSTQ 123
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
+V +A LP M ++K G ++ I S ++ + P + Y A KA +D + E + G
Sbjct: 124 RVNRAALPHMRRQKHGLLIWISSSSS-AGGTPPYLAPYFAAKAAMDAIAVQYARELSRWG 182
Query: 231 IDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAA 265
I+ VP + S A
Sbjct: 183 IETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEA 217
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 3e-28
Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 20/196 (10%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
A++TG +GIG++ A + A G ++ + P + +I+ ++ +V D S
Sbjct: 10 AVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRN--LGRRVLTVKCDVSQ 65
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFH----EVDQVLLKNLIKVNVEGT 169
GD++ +++ D+ L+NN GI YP F + + ++NV+
Sbjct: 66 PGDVEAFGKQVISTFGRCDI--LVNNAGI-YPLIPFDELTFEQWKKT-----FEINVDSG 117
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
+ +A +PGM + G I+N+ S + Y+ Y +TKA F+R+L + K
Sbjct: 118 FLMAKAFVPGMKRNGWGRIINLTSTTYWL--KIEAYTHYISTKAANIGFTRALASDLGKD 175
Query: 230 GIDVQCQVPLYVATKM 245
GI V P V T
Sbjct: 176 GITVNAIAPSLVRTAT 191
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261 | Back alignment and structure |
|---|
Score = 108 bits (273), Expect = 4e-28
Identities = 50/196 (25%), Positives = 84/196 (42%), Gaps = 16/196 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
AL+TG G G+ A + AK G +V+V R+ + V+ I +V D S
Sbjct: 12 ALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDA-----ALAVAADISK 66
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
D+D VE +D +L+NN GI + + V+ ++ VNV G +T
Sbjct: 67 EADVDAAVEAALSKFGKVD--ILVNNAGIGHK-PQNAELVEPEEFDRIVGVNVRGVYLMT 123
Query: 174 QAVLPGMLKRKKGA----IVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
++P + I+N+ S A P + Y ATK ++ +++L +E +
Sbjct: 124 SKLIPHFKENGAKGQECVILNVASTGAGR--PRPNLAWYNATKGWVVSVTKALAIELAPA 181
Query: 230 GIDVQCQVPLYVATKM 245
I V P+ T +
Sbjct: 182 KIRVVALNPVAGETPL 197
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 9e-28
Identities = 55/194 (28%), Positives = 81/194 (41%), Gaps = 17/194 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI--QAKYAKTQIKSVVVDF 113
A+VTG GIG + A +LA G +++ + D + I A VD
Sbjct: 32 AIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAA-------CRVDV 84
Query: 114 S--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
S + V+ A G+D L+ N G+ + + +I +N+ G
Sbjct: 85 SDEQQIIAMVDACVAAFGGVDK--LVANAGVVHL--ASLIDTTVEDFDRVIAINLRGAWL 140
Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
T+ P M++R GAIVN+ S A V + Y +KA I Q SR E R SGI
Sbjct: 141 CTKHAAPRMIERGGGAIVNLSSLAGQV--AVGGTGAYGMSKAGIIQLSRITAAELRSSGI 198
Query: 232 DVQCQVPLYVATKM 245
+P +V T M
Sbjct: 199 RSNTLLPAFVDTPM 212
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 1e-27
Identities = 50/197 (25%), Positives = 83/197 (42%), Gaps = 26/197 (13%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
LVTG GIG++ A A+ G + L P+ K+V+++I + VD
Sbjct: 9 VLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGGAF-------FQVDLED 60
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEV-----DQVLLKNLIKVNVEG 168
+ VE A+ +DV L+NN I+ P V +V ++VN+
Sbjct: 61 ERERVRFVEEAAYALGRVDV--LVNNAAIAAP--GSALTVRLPEWRRV-----LEVNLTA 111
Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
++ M K GAIVN+ S + ++ + Y A+K + +RSL ++
Sbjct: 112 PMHLSALAAREMRKVGGGAIVNVASVQGLF--AEQENAAYNASKGGLVNLTRSLALDLAP 169
Query: 229 SGIDVQCQVPLYVATKM 245
I V P +AT+
Sbjct: 170 LRIRVNAVAPGAIATEA 186
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262 | Back alignment and structure |
|---|
Score = 106 bits (268), Expect = 2e-27
Identities = 53/201 (26%), Positives = 77/201 (38%), Gaps = 26/201 (12%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
+VTG T GIG+ A A+ G N+ + GR+ + + + ++ V D S
Sbjct: 13 VVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGS-GKVIGVQTDVSD 71
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVNV 166
D R E G+DV + N G+ D L + VNV
Sbjct: 72 RAQCDALAGRAVEEFGGIDV--VCANAGVF---------PDAPLATMTPEQLNGIFAVNV 120
Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV--IPSDPLYSVYAATKAYIDQFSRSLYV 224
GT QA L ++ G +V S I I P +S Y ATKA F R+ +
Sbjct: 121 NGTFYAVQACLDALIASGSGRVVLTSS---ITGPITGYPGWSHYGATKAAQLGFMRTAAI 177
Query: 225 EYRKSGIDVQCQVPLYVATKM 245
E I V +P + T+
Sbjct: 178 ELAPHKITVNAIMPGNIMTEG 198
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 2e-27
Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 26/200 (13%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
ALVTG GIG+ A LAK+ +++ + R V D I++ + D S
Sbjct: 47 ALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKS--FGYESSGYAGDVSK 104
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVNV 166
++ E + +I + +D +L+NN GI+ R D + L+ ++++ N+
Sbjct: 105 KEEISEVINKILTEHKNVD--ILVNNAGIT----R-----DNLFLRMKNDEWEDVLRTNL 153
Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV-IPSDPLYSVYAATKAYIDQFSRSLYVE 225
+TQ + M+ + G I+NI S IV + + + Y+++KA + F++SL E
Sbjct: 154 NSLFYITQPISKRMINNRYGRIINISS---IVGLTGNVGQANYSSSKAGVIGFTKSLAKE 210
Query: 226 YRKSGIDVQCQVPLYVATKM 245
I V P ++++ M
Sbjct: 211 LASRNITVNAIAPGFISSDM 230
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 2e-27
Identities = 37/202 (18%), Positives = 72/202 (35%), Gaps = 25/202 (12%)
Query: 56 ALVTGPTD--GIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
+VTG + G+G A A+ G + + ++ ++ Y + K+
Sbjct: 23 VVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTY-GIKAKAYKCQ 81
Query: 113 FS--GDLDEGVERIKEAIEGLDVGVLINNVGIS-------YPYARFFHEVDQVLLKNLIK 163
++ V+ + +D I N G + + + V ++
Sbjct: 82 VDSYESCEKLVKDVVADFGQIDA--FIANAGATADSGILDGSVEAW----NHV-----VQ 130
Query: 164 VNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLY 223
V++ GT +AV +R G++V S + + + Y KA +RSL
Sbjct: 131 VDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLA 190
Query: 224 VEYRKSGIDVQCQVPLYVATKM 245
E+R V P Y+ T +
Sbjct: 191 NEWR-DFARVNSISPGYIDTGL 211
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265 | Back alignment and structure |
|---|
Score = 106 bits (268), Expect = 2e-27
Identities = 48/205 (23%), Positives = 86/205 (41%), Gaps = 27/205 (13%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
+VTG GIG +F +A G N+ ++ R+ +V++ + ++ + K+ D S
Sbjct: 17 IIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVSN 75
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGIS-------YPYARFFHEVDQVLLKNLIKVNV 166
+ + +++I + + LI N G+S + F V VNV
Sbjct: 76 TDIVTKTIQQIDADLGPIS--GLIANAGVSVVKPATELTHEDF----AFV-----YDVNV 124
Query: 167 EGTTKVTQAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLY-----SVYAATKAYIDQFSR 220
G +AV L++++ G+IV S ++ +I L Y ++KA +
Sbjct: 125 FGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVK 184
Query: 221 SLYVEYRKSGIDVQCQVPLYVATKM 245
L E+ +GI V P YV T
Sbjct: 185 GLAAEWASAGIRVNALSPGYVNTDQ 209
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 3e-27
Identities = 29/198 (14%), Positives = 53/198 (26%), Gaps = 33/198 (16%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK------DVSDSIQAKYAKTQIKSV 109
LV G + +G N + + + S + K
Sbjct: 25 ILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHSFTIKDSGEEEIKSV------- 77
Query: 110 VVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
+E+I +D + G + +K +I +N+
Sbjct: 78 -----------IEKINSKSIKVD--TFVCAAGGWSGGNA-SSDEFLKSVKGMIDMNLYSA 123
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY--R 227
+ + G V G+ AA+ Y ATKA + L E
Sbjct: 124 FASAHIGAKLL--NQGGLFVLTGASAALNRT--SGMIAYGATKAATHHIIKDLASENGGL 179
Query: 228 KSGIDVQCQVPLYVATKM 245
+G +P+ + T
Sbjct: 180 PAGSTSLGILPVTLDTPT 197
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 3e-27
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 29/198 (14%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
+L+TG + GIG + A L K G +++ G N +KLK + ++++ V + +
Sbjct: 17 SLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDN-----YTIEVCNLAN 71
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLL-------KNLIKVNVEG 168
E + LD +L+ N GI D + + +I +N++
Sbjct: 72 --KEECSNLISKTSNLD--ILVCNAGI----TS-----DTLAIRMKDQDFDKVIDINLKA 118
Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIV-IPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
+ + + M++++ G I+NI S IV I +P + Y A+KA + ++SL E
Sbjct: 119 NFILNREAIKKMIQKRYGRIINISS---IVGIAGNPGQANYCASKAGLIGMTKSLSYEVA 175
Query: 228 KSGIDVQCQVPLYVATKM 245
GI V P ++ + M
Sbjct: 176 TRGITVNAVAPGFIKSDM 193
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 4e-27
Identities = 55/200 (27%), Positives = 97/200 (48%), Gaps = 29/200 (14%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
ALVTG T GIG++ A G + L G DKLK+++ + + + S
Sbjct: 30 ALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKD-----VFVFSANLSD 84
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVNV 166
+ + E + +EG+D +L+NN GI+ R D + ++ +++ VN+
Sbjct: 85 RKSIKQLAEVAEREMEGID--ILVNNAGIT----R-----DGLFVRMQDQDWDDVLAVNL 133
Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV-IPSDPLYSVYAATKAYIDQFSRSLYVE 225
+ +T+ ++ M++R+ G I+NI S IV + +P + Y A KA + FS++L E
Sbjct: 134 TAASTLTRELIHSMMRRRYGRIINITS---IVGVVGNPGQTNYCAAKAGLIGFSKALAQE 190
Query: 226 YRKSGIDVQCQVPLYVATKM 245
I V C P ++ + M
Sbjct: 191 IASRNITVNCIAPGFIKSAM 210
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293 | Back alignment and structure |
|---|
Score = 106 bits (268), Expect = 4e-27
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 26/201 (12%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
LVTG T GIG+ A A+ G N+ + R+P +L V+ + A + V +D S
Sbjct: 44 VLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGA-GNVIGVRLDVSD 102
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVNV 166
G + + +A LDV + N GI + L ++ VNV
Sbjct: 103 PGSCADAARTVVDAFGALDV--VCANAGIF----P-----EARLDTMTPEQLSEVLDVNV 151
Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV--IPSDPLYSVYAATKAYIDQFSRSLYV 224
+GT QA L + +G ++ S I + P +S Y A+KA F R+ +
Sbjct: 152 KGTVYTVQACLAPLTASGRGRVILTSS---ITGPVTGYPGWSHYGASKAAQLGFMRTAAI 208
Query: 225 EYRKSGIDVQCQVPLYVATKM 245
E G+ V +P + T+
Sbjct: 209 ELAPRGVTVNAILPGNILTEG 229
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 4e-27
Identities = 37/194 (19%), Positives = 70/194 (36%), Gaps = 19/194 (9%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
A+VT G A +L++ G + + + ++ +A+T + +
Sbjct: 4 AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL-----EAFAETYPQLKPMSEQ- 57
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGI---SYPYARFFHEV-DQVLLKNLIKVNVEGTTK 171
+ E +E + A +DV L++N P ++ E ++
Sbjct: 58 EPAELIEAVTSAYGQVDV--LVSNDIFAPEFQPIDKYAVEDYRGA-----VEALQIRPFA 110
Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
+ AV M KRK G I+ I S S Y + +A + +L E + I
Sbjct: 111 LVNAVASQMKKRKSGHIIFITSATPFG--PWKELSTYTSARAGACTLANALSKELGEYNI 168
Query: 232 DVQCQVPLYVATKM 245
V P Y+ ++
Sbjct: 169 PVFAIGPNYLHSED 182
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 4e-27
Identities = 40/192 (20%), Positives = 78/192 (40%), Gaps = 14/192 (7%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
+VTG GIG +G +V+ ++ + + + ++ D +
Sbjct: 12 VVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVF------ILCDVTQ 65
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
D+ V LD ++NN G P R E + L+++N+ GT +T
Sbjct: 66 EDDVKTLVSETIRRFGRLD--CVVNNAGHHPPPQR-PEETSAQGFRQLLELNLLGTYTLT 122
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
+ LP + ++ +G ++NI S + Y ATK + +++L ++ G+ V
Sbjct: 123 KLALPYL-RKSQGNVINISSLVGAI--GQAQAVPYVATKGAVTAMTKALALDESPYGVRV 179
Query: 234 QCQVPLYVATKM 245
C P + T +
Sbjct: 180 NCISPGNIWTPL 191
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 7e-27
Identities = 55/200 (27%), Positives = 97/200 (48%), Gaps = 26/200 (13%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
A+VTG + GIG++ A +LA+ G ++ + + + + A + + V++ +
Sbjct: 31 AIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQ--AGLEGRGAVLNVND 88
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVNV 166
+D VE + L+ VL+NN GI+ + DQ+ ++ +I N+
Sbjct: 89 ATAVDALVESTLKEFGALN--VLVNNAGIT----Q-----DQLAMRMKDDEWDAVIDTNL 137
Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV-IPSDPLYSVYAATKAYIDQFSRSLYVE 225
+ ++++AVL M+K + G IVNI S +V +P YAA KA + +R+L E
Sbjct: 138 KAVFRLSRAVLRPMMKARGGRIVNITS---VVGSAGNPGQVNYAAAKAGVAGMTRALARE 194
Query: 226 YRKSGIDVQCQVPLYVATKM 245
GI V C P ++ T M
Sbjct: 195 IGSRGITVNCVAPGFIDTDM 214
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 8e-27
Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 22/199 (11%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
++TG + G+GKS A + A +V+ R D+ V + I+ + +V D +
Sbjct: 10 VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKK--VGGEAIAVKGDVT 67
Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEV-----DQVLLKNLIKVNVE 167
D+ V+ + LDV +INN G+ P + HE+ ++V I N+
Sbjct: 68 VESDVINLVQSAIKEFGKLDV--MINNAGLENPVS--SHEMSLSDWNKV-----IDTNLT 118
Query: 168 GTTKVTQAVLPGMLK-RKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
G ++ + ++ KG ++N+ S + PL+ YAA+K + + +L +EY
Sbjct: 119 GAFLGSREAIKYFVENDIKGTVINMSSVHEKI--PWPLFVHYAASKGGMKLMTETLALEY 176
Query: 227 RKSGIDVQCQVPLYVATKM 245
GI V P + T +
Sbjct: 177 APKGIRVNNIGPGAINTPI 195
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 8e-27
Identities = 50/220 (22%), Positives = 86/220 (39%), Gaps = 21/220 (9%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
A+VTG + GIG + L + G +V V + +VSD + D +
Sbjct: 17 AIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFKI------------DVTN 64
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
++ E VE+ + +D+ L+NN GI H + + +I VNV G+ +
Sbjct: 65 EEEVKEAVEKTTKKYGRIDI--LVNNAGIEQY--SPLHLTPTEIWRRIIDVNVNGSYLMA 120
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
+ +P ML G+I+NI S + + + Y +K + +RS+ ++Y I
Sbjct: 121 KYTIPVMLAIGHGSIINIASVQSYA--ATKNAAAYVTSKHALLGLTRSVAIDYAP-KIRC 177
Query: 234 QCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEP 273
P + T M + R W P
Sbjct: 178 NAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHP 217
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 1e-26
Identities = 48/199 (24%), Positives = 86/199 (43%), Gaps = 30/199 (15%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
L+TG GIG++ AK G LV L++ ++++ A VV+D +
Sbjct: 8 VLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGA-------HPVVMDVAD 60
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVNV 166
++ G + LD +++ GI+ R D K +++VN+
Sbjct: 61 PASVERGFAEALAHLGRLD--GVVHYAGIT----R-----DNFHWKMPLEDWELVLRVNL 109
Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
G+ V +A M ++ G+IV S V + + YAA+ A + +R+L +E
Sbjct: 110 TGSFLVAKAASEAMREKNPGSIVLTAS---RVYLGNLGQANYAASMAGVVGLTRTLALEL 166
Query: 227 RKSGIDVQCQVPLYVATKM 245
+ GI V P ++ T+M
Sbjct: 167 GRWGIRVNTLAPGFIETRM 185
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278 | Back alignment and structure |
|---|
Score = 104 bits (263), Expect = 1e-26
Identities = 50/195 (25%), Positives = 82/195 (42%), Gaps = 12/195 (6%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
A++TG GIG++ A + G +V+ D + V ++I + + + V
Sbjct: 19 AIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTK--- 75
Query: 116 DLDEGVER-IKEAIE---GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
DE V + I LD+ + NVG+ E K ++ +NV G
Sbjct: 76 --DEDVRNLVDTTIAKHGKLDI--MFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFL 131
Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
V + M+ KKG+IV S ++ + + VY ATK + + SL E + GI
Sbjct: 132 VAKHAARVMIPAKKGSIVFTASISSFT-AGEGVSHVYTATKHAVLGLTTSLCTELGEYGI 190
Query: 232 DVQCQVPLYVATKMA 246
V C P VA+ +
Sbjct: 191 RVNCVSPYIVASPLL 205
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 2e-26
Identities = 53/200 (26%), Positives = 103/200 (51%), Gaps = 29/200 (14%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
ALVTG + GIGK+ A LA+ G ++ + + +SD + K + ++ +
Sbjct: 12 ALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDN-----GKGMALNVTN 66
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVNV 166
++ ++ I + G+D +L+NN GI+ R D +L++ ++++ N+
Sbjct: 67 PESIEAVLKAITDEFGGVD--ILVNNAGIT----R-----DNLLMRMKEEEWSDIMETNL 115
Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV-IPSDPLYSVYAATKAYIDQFSRSLYVE 225
++++AVL GM+K+++G I+N+GS +V + + YAA KA + F++S+ E
Sbjct: 116 TSIFRLSKAVLRGMMKKRQGRIINVGS---VVGTMGNAGQANYAAAKAGVIGFTKSMARE 172
Query: 226 YRKSGIDVQCQVPLYVATKM 245
G+ V P ++ T M
Sbjct: 173 VASRGVTVNTVAPGFIETDM 192
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 2e-26
Identities = 45/202 (22%), Positives = 73/202 (36%), Gaps = 22/202 (10%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-PDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
L+TG + GIG + A A+ G + L GR P + + S++A D +
Sbjct: 10 VLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRA--DGGDAAFFAADLA 67
Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFF----HEVDQVLLKNLIKVNVEG 168
+ V+ G+D VLINN G D V + N+
Sbjct: 68 TSEACQQLVDEFVAKFGGID--VLINNAGGLVGRKPLPEIDDTFYDAV-----MDANIRS 120
Query: 169 TTKVTQAVLPGMLKR-----KKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLY 223
T+ LP + + A+++ GS A P +Y A KA++ ++
Sbjct: 121 VVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGG-PGAGLYGAAKAFLHNVHKNWV 179
Query: 224 VEYRKSGIDVQCQVPLYVATKM 245
+ K G+ P V T
Sbjct: 180 DFHTKDGVRFNIVSPGTVDTAF 201
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 3e-26
Identities = 50/195 (25%), Positives = 87/195 (44%), Gaps = 16/195 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAKTQ-IKSVVVDF 113
A VTG + GIG + A +LA G + L ++ + V I+ + I++ D
Sbjct: 34 AFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRD- 92
Query: 114 SGDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARF-FHEVDQVLLKNLIKVNVEGTT 170
+ +++ + EA+ GLD+ L+N+ GI + P + D+V + VN
Sbjct: 93 AEAIEQAIRETVEALGGLDI--LVNSAGIWHSAPLEETTVADFDEV-----MAVNFRAPF 145
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
++ + G I+ IGS A ++P P S+Y+A+KA + ++ L + G
Sbjct: 146 VAIRSASRHL--GDGGRIITIGSNLAELVPW-PGISLYSASKAALAGLTKGLARDLGPRG 202
Query: 231 IDVQCQVPLYVATKM 245
I V P T M
Sbjct: 203 ITVNIVHPGSTDTDM 217
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247 | Back alignment and structure |
|---|
Score = 102 bits (258), Expect = 4e-26
Identities = 52/200 (26%), Positives = 79/200 (39%), Gaps = 28/200 (14%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
ALVTG GIGK+ A +LA G +++ N + K + SI K +++ D S
Sbjct: 9 ALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKK-----ARAIAADISD 63
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVNV 166
G + I+ G+D +L+NN I +I VN+
Sbjct: 64 PGSVKALFAEIQALTGGID--ILVNNASIV----P-----FVAWDDVDLDHWRKIIDVNL 112
Query: 167 EGTTKVTQAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
GT VT+A M K G +++I S P + Y A K + F+R+L E
Sbjct: 113 TGTFIVTRAGTDQMRAAGKAGRVISIASNTFFA--GTPNMAAYVAAKGGVIGFTRALATE 170
Query: 226 YRKSGIDVQCQVPLYVATKM 245
K I P + +
Sbjct: 171 LGKYNITANAVTPGLIESDG 190
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 4e-26
Identities = 56/196 (28%), Positives = 83/196 (42%), Gaps = 12/196 (6%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVG--RNPDKLKDVSDSIQAKYAKTQ-IKSVVVD 112
LVTG + GIG + A+ G V V N + V +I + I V +
Sbjct: 29 VLVTGGSRGIGAAVCRLAARQGWR-VGVNYAANREAADAVVAAITESGGEAVAIPGDVGN 87
Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
+ D+ + LD L+NN GI R E+ ++ +++VNV G+
Sbjct: 88 AA-DIAAMFSAVDRQFGRLDG--LVNNAGIVDYPQRV-DEMSVERIERMLRVNVTGSILC 143
Query: 173 TQAVLPGMLKRKK---GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
+ M + GAIVN+ S AA ++ S Y YAA+KA ID F+ L E
Sbjct: 144 AAEAVRRMSRLYSGQGGAIVNVSSMAA-ILGSATQYVDYAASKAAIDTFTIGLAREVAAE 202
Query: 230 GIDVQCQVPLYVATKM 245
GI V P + T +
Sbjct: 203 GIRVNAVRPGIIETDL 218
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 5e-26
Identities = 55/199 (27%), Positives = 84/199 (42%), Gaps = 25/199 (12%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
A+VTG + GIG + A +LA G +V+ ++V+ I+A A + + D S
Sbjct: 30 AIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEA--AGGKALTAQADVS 87
Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARF----FHEVDQVLLKNLIKVNV 166
+ +EA G+DV L+NN GI A F V I VN+
Sbjct: 88 DPAAVRRLFATAEEAFGGVDV--LVNNAGIMPLTTIAETGDAVFDRV--------IAVNL 137
Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
+GT + + R G I+N+ + + P Y +YAA KA ++ + L E
Sbjct: 138 KGTFNTLREAAQRL--RVGGRIINMSTSQVGL--LHPSYGIYAAAKAGVEAMTHVLSKEL 193
Query: 227 RKSGIDVQCQVPLYVATKM 245
R I V P AT +
Sbjct: 194 RGRDITVNAVAPGPTATDL 212
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 6e-26
Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 25/200 (12%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
+LVTG T GIG++ A +LA G +++ G + ++ K V++ I KY + V ++
Sbjct: 10 SLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYG-VKAHGVEMNLLS 68
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVNV 166
+++ E I ++G+D+ L+NN GI+ R D++ L+ ++KVN+
Sbjct: 69 EESINKAFEEIYNLVDGIDI--LVNNAGIT----R-----DKLFLRMSLLDWEEVLKVNL 117
Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV-IPSDPLYSVYAATKAYIDQFSRSLYVE 225
GT VTQ L M+K++ G IVNI S +V + Y+ TKA + F++SL E
Sbjct: 118 TGTFLVTQNSLRKMIKQRWGRIVNISS---VVGFTGNVGQVNYSTTKAGLIGFTKSLAKE 174
Query: 226 YRKSGIDVQCQVPLYVATKM 245
+ V P ++ T M
Sbjct: 175 LAPRNVLVNAVAPGFIETDM 194
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 7e-26
Identities = 37/194 (19%), Positives = 72/194 (37%), Gaps = 13/194 (6%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVL---VGRNPDKLKDVSDSIQAKYAKTQ-IKSVVV 111
++ G +G A A +NLVL ++ D + D ++ + AK +S +
Sbjct: 14 IVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLS 73
Query: 112 DFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
+ ++ + + ++ +D+ IN VG + E + + +N +
Sbjct: 74 NEE-EVAKLFDFAEKEFGKVDI--AINTVGKVLK--KPIVETSEAEFDAMDTINNKVAYF 128
Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
+ M G I+ I + YS YA KA ++ ++R+ E K I
Sbjct: 129 FIKQAAKHM--NPNGHIITIATSLLAA--YTGFYSTYAGNKAPVEHYTRAASKELMKQQI 184
Query: 232 DVQCQVPLYVATKM 245
V P + T
Sbjct: 185 SVNAIAPGPMDTSF 198
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 8e-26
Identities = 47/197 (23%), Positives = 78/197 (39%), Gaps = 17/197 (8%)
Query: 56 ALVTGPTD-GIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
LVT GIG + A + G ++V+ + +L + D + ++++VV D +
Sbjct: 25 VLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADL-GLGRVEAVVCDVT 83
Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARFFHEV-DQVLLKNLIKVNVEGT 169
+D + + E LD VL+NN G+ P E D+V + V +
Sbjct: 84 STEAVDALITQTVEKAGRLD--VLVNNAGLGGQTPVVDMTDEEWDRV-----LNVTLTSV 136
Query: 170 TKVTQAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
+ T+A L G IVN S + S YAA KA + +R +E +
Sbjct: 137 MRATRAALRYFRGVDHGGVIVNNASVLGWR--AQHSQSHYAAAKAGVMALTRCSAIEAVE 194
Query: 229 SGIDVQCQVPLYVATKM 245
G+ + P K
Sbjct: 195 FGVRINAVSPSIARHKF 211
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 9e-26
Identities = 40/193 (20%), Positives = 70/193 (36%), Gaps = 12/193 (6%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
+V G IG++ A + A+ G N+VL + I+ ++ D +
Sbjct: 11 IVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSA--LAIKADLT 68
Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
+++ + + + L++ G E+D+ ++ VN+
Sbjct: 69 NAAEVEAAISAAADKFGEIH--GLVHVAGGLIARKT-IAEMDEAFWHQVLDVNLTSLFLT 125
Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
+ LP M K GAIV S A P YA +K + F+R L E I
Sbjct: 126 AKTALPKM--AKGGAIVTFSSQAGRDGGG-PGALAYATSKGAVMTFTRGLAKEV-GPKIR 181
Query: 233 VQCQVPLYVATKM 245
V P ++T
Sbjct: 182 VNAVCPGMISTTF 194
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 1e-25
Identities = 48/192 (25%), Positives = 74/192 (38%), Gaps = 13/192 (6%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI--QAKYAKTQIKSVVVDF 113
++TG G+G A Q G +VL ++ + + A+Y V
Sbjct: 8 VIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLD----VTIE 63
Query: 114 SGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
D V +E +D L+NN GIS F + ++++N+ G
Sbjct: 64 E-DWQRVVAYAREEFGSVDG--LVNNAGISTG--MFLETESVERFRKVVEINLTGVFIGM 118
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
+ V+P M G+IVNI S A ++ L S Y A+K + S+ VE I V
Sbjct: 119 KTVIPAMKDAGGGSIVNISSAAGLM--GLALTSSYGASKWGVRGLSKLAAVELGTDRIRV 176
Query: 234 QCQVPLYVATKM 245
P T M
Sbjct: 177 NSVHPGMTYTPM 188
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 1e-25
Identities = 41/208 (19%), Positives = 79/208 (37%), Gaps = 30/208 (14%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-------PDKLKDVSDSIQAKYAKTQIKS 108
+TG + GIG + A + A+ G N+ + ++ P + + ++ A A Q +
Sbjct: 9 LFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNA--AGGQGLA 66
Query: 109 VVVDFS--GDLDEGVERIKEAIEGLDVGVLINNVGISY-------PYARFFHEVDQVLLK 159
+ D + V + G+D+ L+NN + P RF D +
Sbjct: 67 LKCDIREEDQVRAAVAATVDTFGGIDI--LVNNASAIWLRGTLDTPMKRF----DLM--- 117
Query: 160 NLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFS 219
+VN G+ QA LP +L+ I+ + ++ ++ Y K + +
Sbjct: 118 --QQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVT 175
Query: 220 RSLYVEYRKSGIDVQCQVP-LYVATKMA 246
L E+ G+ + P +AT
Sbjct: 176 LGLAAEFGPQGVAINALWPRTVIATDAI 203
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 2e-25
Identities = 56/201 (27%), Positives = 104/201 (51%), Gaps = 26/201 (12%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKY--AKTQIKSVVVD 112
AL+TG + GIG++ A +LA+ G L + G+N +K ++V++ + + + + +++
Sbjct: 4 ALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLE 63
Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVN 165
V + E + GLD L+NN GI+ R D +L++ +++ N
Sbjct: 64 AE-AATALVHQAAEVLGGLDT--LVNNAGIT----R-----DTLLVRMKDEDWEAVLEAN 111
Query: 166 VEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV-IPSDPLYSVYAATKAYIDQFSRSLYV 224
+ + T+ + M+K + G IVNI S +V I +P + Y A+KA + F+R++
Sbjct: 112 LSAVFRTTREAVKLMMKARFGRIVNITS---VVGILGNPGQANYVASKAGLIGFTRAVAK 168
Query: 225 EYRKSGIDVQCQVPLYVATKM 245
EY + GI V P ++ T+M
Sbjct: 169 EYAQRGITVNAVAPGFIETEM 189
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 2e-25
Identities = 40/192 (20%), Positives = 76/192 (39%), Gaps = 23/192 (11%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
LVTG + GIGK+ L + + V+ IQ ++ +K + D +
Sbjct: 7 YLVTGGSKGIGKAVVELLLQNKNHTVINID-----------IQQSFSAENLKFIKADLT- 54
Query: 116 DLDEGVERIKEAIE--GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
+ + + + I+ D + N GI ++D +K ++ +NV +
Sbjct: 55 KQQD-ITNVLDIIKNVSFDG--IFLNAGILIK--GSIFDIDIESIKKVLDLNVWSSIYFI 109
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
+ + + + +IV GS + + P Y +K I Q ++SL ++ K I V
Sbjct: 110 KGLENNL--KVGASIVFNGSDQCFI--AKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRV 165
Query: 234 QCQVPLYVATKM 245
P V T +
Sbjct: 166 NTVCPGTVDTDL 177
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 2e-25
Identities = 44/205 (21%), Positives = 69/205 (33%), Gaps = 46/205 (22%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK--------DVSDSIQAKYAKTQIK 107
VTG GIG + A + G + + + + DV+D+ Q
Sbjct: 10 VWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFATEVMDVADAAQV-------- 61
Query: 108 SVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------N 160
+ +R+ E LD L+N GI +
Sbjct: 62 ----------AQVCQRLLAETERLDA--LVNAAGIL---------RMGATDQLSKEDWQQ 100
Query: 161 LIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSR 220
VNV G + Q + +++ GAIV + S AA S Y A+KA + +
Sbjct: 101 TFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHT--PRIGMSAYGASKAALKSLAL 158
Query: 221 SLYVEYRKSGIDVQCQVPLYVATKM 245
S+ +E SG+ P T M
Sbjct: 159 SVGLELAGSGVRCNVVSPGSTDTDM 183
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 3e-25
Identities = 49/194 (25%), Positives = 79/194 (40%), Gaps = 17/194 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI--QAKYAKTQIKSVVVDF 113
ALV+G G+G S + G +V ++ K ++ + A+Y V +D
Sbjct: 10 ALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARY-------VHLDV 62
Query: 114 S--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
+ V+ A GL V L+NN GI + + ++ VN+ G
Sbjct: 63 TQPAQWKAAVDTAVTAFGGLHV--LVNNAGILNI--GTIEDYALTEWQRILDVNLTGVFL 118
Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
+AV+ M + +G+I+NI S + Y ATK + ++S +E SGI
Sbjct: 119 GIRAVVKPMKEAGRGSIINISSIEGLA--GTVACHGYTATKFAVRGLTKSTALELGPSGI 176
Query: 232 DVQCQVPLYVATKM 245
V P V T M
Sbjct: 177 RVNSIHPGLVKTPM 190
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 4e-25
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 20/200 (10%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQ-IKSVVVDF 113
A+VTG GIG A LA +G ++ + G + + + V + A+ +++ + D
Sbjct: 32 AIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADL 91
Query: 114 SGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEV-----DQVLLKNLIKVNVEG 168
S V+ + +D L+NN GI+ F ++ D + + VN+ G
Sbjct: 92 S-SHQATVDAVVAEFGRID--CLVNNAGIASIVRDDFLDLKPENFDTI-----VGVNLRG 143
Query: 169 TTKVTQAVLPGMLK---RKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
T TQAVL ML R +I+NI S +A++ + P Y +KA + FS+ L +
Sbjct: 144 TVFFTQAVLKAMLASDARASRSIINITSVSAVM--TSPERLDYCMSKAGLAAFSQGLALR 201
Query: 226 YRKSGIDVQCQVPLYVATKM 245
++GI V P + + M
Sbjct: 202 LAETGIAVFEVRPGIIRSDM 221
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 4e-25
Identities = 41/195 (21%), Positives = 75/195 (38%), Gaps = 16/195 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
AL+TG G+G++ + G + ++ ++ ++L+++ + VV D
Sbjct: 8 ALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGN-----AVGVVGDVRS 62
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKN---LIKVNVEGTT 170
D ER A +D LI N GI + + + VNV+G
Sbjct: 63 LQDQKRAAERCLAAFGKID--TLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYI 120
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
+A LP ++ +G++V S A + +Y ATK + R + E
Sbjct: 121 HAVKACLPALVSS-RGSVVFTISNAGFY--PNGGGPLYTATKHAVVGLVRQMAFEL-APH 176
Query: 231 IDVQCQVPLYVATKM 245
+ V P + T +
Sbjct: 177 VRVNGVAPGGMNTDL 191
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 4e-25
Identities = 48/223 (21%), Positives = 85/223 (38%), Gaps = 22/223 (9%)
Query: 56 ALVTGPTDGIGKSFAFQLAKT---GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
L+TG + GIG A +LA + R+ + ++ +A +
Sbjct: 5 VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQ- 63
Query: 113 FSGDLD----EGVER-IKEAIEG-LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNV 166
LD + V + EG +DV L+ N G+ + + + +++ VNV
Sbjct: 64 ----LDVRDSKSVAAARERVTEGRVDV--LVCNAGLGLLGP--LEALGEDAVASVLDVNV 115
Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
GT ++ QA LP M +R G ++ GS ++ P VY A+K ++ SL V
Sbjct: 116 VGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLM--GLPFNDVYCASKFALEGLCESLAVLL 173
Query: 227 RKSGIDVQCQVPLYVATKMA--SIKRSSFFVPSTDVYARAAMR 267
G+ + V T + + TD++
Sbjct: 174 LPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFY 216
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 4e-25
Identities = 40/192 (20%), Positives = 80/192 (41%), Gaps = 10/192 (5%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAKTQ-IKSVVVDF 113
ALVTG GIG+ A +L + G +++ + + ++V +I+ + +K+ V
Sbjct: 32 ALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVV 91
Query: 114 SGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
D+ E + LD+ + +N G+ + +V + +N G V
Sbjct: 92 -EDIVRMFEEAVKIFGKLDI--VCSNSGV-VSFGHV-KDVTPEEFDRVFTINTRGQFFVA 146
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
+ + G ++ +GS P ++VY+ +K I+ F+R + ++ I V
Sbjct: 147 REAYKHL--EIGGRLILMGSITGQAKAV-PKHAVYSGSKGAIETFARCMAIDMADKKITV 203
Query: 234 QCQVPLYVATKM 245
P + T M
Sbjct: 204 NVVAPGGIKTDM 215
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 5e-25
Identities = 55/211 (26%), Positives = 81/211 (38%), Gaps = 47/211 (22%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
A VTG GIG S +L K G +V G N + + +A + +
Sbjct: 16 AYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKA--LGFDFYASEGNVG 73
Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVN 165
+ +++K + +DV L+NN GI+ R D V K +I N
Sbjct: 74 DWDSTKQAFDKVKAEVGEIDV--LVNNAGIT----R-----DVVFRKMTREDWQAVIDTN 122
Query: 166 VEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV-----------YAATKAY 214
+ VT+ V+ GM++R G I+NI SV Y+ KA
Sbjct: 123 LTSLFNVTKQVIDGMVERGWGRIINIS-------------SVNGQKGQFGQTNYSTAKAG 169
Query: 215 IDQFSRSLYVEYRKSGIDVQCQVPLYVATKM 245
I F+ SL E G+ V P Y+ T M
Sbjct: 170 IHGFTMSLAQEVATKGVTVNTVSPGYIGTDM 200
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 5e-25
Identities = 55/211 (26%), Positives = 89/211 (42%), Gaps = 47/211 (22%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
A VTG G+G + + +L G+ + + D + + A K+ VD +
Sbjct: 28 AFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERD--AGRDFKAYAVDVA 85
Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVN 165
+ E++ +DV LINN GI+ R D +K +++ +
Sbjct: 86 DFESCERCAEKVLADFGKVDV--LINNAGIT----R-----DATFMKMTKGDWDAVMRTD 134
Query: 166 VEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV-----------YAATKAY 214
++ VT+ + GM++R+ G IVNIG SV YA+ KA
Sbjct: 135 LDAMFNVTKQFIAGMVERRFGRIVNIG-------------SVNGSRGAFGQANYASAKAG 181
Query: 215 IDQFSRSLYVEYRKSGIDVQCQVPLYVATKM 245
I F+++L +E K GI V P Y+AT M
Sbjct: 182 IHGFTKTLALETAKRGITVNTVSPGYLATAM 212
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 5e-25
Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 16/200 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKS------- 108
+TG + GIGK+ A + AK G N+V+ + + +I A +I++
Sbjct: 48 VFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYT--AAEEIEAVGGKALP 105
Query: 109 VVVD--FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNV 166
+VD + VE+ + G+D+ L+NN + L ++ VN
Sbjct: 106 CIVDVRDEQQISAAVEKAIKKFGGIDI--LVNNASAISL--TNTLDTPTKRLDLMMNVNT 161
Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
GT ++A +P + K K I+NI + + Y K + + + E+
Sbjct: 162 RGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEF 221
Query: 227 RKSGIDVQCQVPLYVATKMA 246
K I V P A
Sbjct: 222 -KGEIAVNALWPKTAIHTAA 240
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 6e-25
Identities = 46/216 (21%), Positives = 84/216 (38%), Gaps = 49/216 (22%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQI-----KSVV 110
ALVTG GIG++ + +LA G + + ++ + +K +
Sbjct: 10 ALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQ 69
Query: 111 VDFSGDLDEGVERIKEAIE--GLDVGVLINNVGISYPYARFFHEVDQVLLK-------NL 161
D S + +++ V+++ GI + D+ LL +
Sbjct: 70 ADVS-EARAARCLLEQVQACFSRPPSVVVSCAGI----TQ-----DEFLLHMSEDDWDKV 119
Query: 162 IKVNVEGTTKVTQAVLPGMLK-RKKGAIVNIGSGAAIVIPSDPLYSV-----------YA 209
I VN++GT VTQA ++ +G+I+NI S+ YA
Sbjct: 120 IAVNLKGTFLVTQAAAQALVSNGCRGSIINIS-------------SIVGKVGNVGQTNYA 166
Query: 210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKM 245
A+KA + +++ E + GI +P ++AT M
Sbjct: 167 ASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPM 202
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 6e-25
Identities = 51/192 (26%), Positives = 90/192 (46%), Gaps = 10/192 (5%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAK-TQIKSVVVDF 113
AL TG GIG+ A +L + G ++V+ G + ++V ++ A+ I++ +
Sbjct: 24 ALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKP 83
Query: 114 SGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
S ++ ++ GLD +++N G+ + EV Q L + +N G V
Sbjct: 84 S-EVVALFDKAVSHFGGLDF--VMSNSGM-EVWCDE-LEVTQELFDKVFNLNTRGQFFVA 138
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
Q L R+ G I+ S AA++ P +++YA +KA ++ F R+ V+ G+ V
Sbjct: 139 QQGLKHC--RRGGRIILTSSIAAVMTGI-PNHALYAGSKAAVEGFCRAFAVDCGAKGVTV 195
Query: 234 QCQVPLYVATKM 245
C P V T M
Sbjct: 196 NCIAPGGVKTDM 207
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251 | Back alignment and structure |
|---|
Score = 99.9 bits (250), Expect = 6e-25
Identities = 43/193 (22%), Positives = 83/193 (43%), Gaps = 10/193 (5%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
A++TG T GIG + A + + G +++ GR+ D + + S+ + D
Sbjct: 9 AIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSD-ED 67
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
+ + ++A + L+NN GI+ + E + L+ VN++G T+
Sbjct: 68 GWTKLFDATEKAFGPVS--TLVNNAGIAVN--KSVEETTTAEWRKLLAVNLDGVFFGTRL 123
Query: 176 VLPGMLKRKKG-AIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY--RKSGID 232
+ M + G +I+N+ S V DP Y A+K + S+S ++ + +
Sbjct: 124 GIQRMKNKGLGASIINMSSIEGFV--GDPSLGAYNASKGAVRIMSKSAALDCALKDYDVR 181
Query: 233 VQCQVPLYVATKM 245
V P Y+ T +
Sbjct: 182 VNTVHPGYIKTPL 194
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264 | Back alignment and structure |
|---|
Score = 99.6 bits (249), Expect = 9e-25
Identities = 39/197 (19%), Positives = 78/197 (39%), Gaps = 32/197 (16%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK-------DVSDSIQAKYAKTQIKS 108
+VTG + GIG++ A + G ++ + + DV++ Q K + I
Sbjct: 11 VIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKYDHIECDVTNPDQVKAS---IDH 67
Query: 109 VVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEG 168
+ ++ G + VL+NN GI + + +I VN+ G
Sbjct: 68 IFKEY-GSIS----------------VLVNNAGIESYGK--IESMSMGEWRRIIDVNLFG 108
Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
++ +P M++ + +IVNI S A + S Y +K + ++S+ ++Y
Sbjct: 109 YYYASKFAIPYMIRSRDPSIVNISSVQASI--ITKNASAYVTSKHAVIGLTKSIALDYAP 166
Query: 229 SGIDVQCQVPLYVATKM 245
+ P + T +
Sbjct: 167 -LLRCNAVCPATIDTPL 182
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270 | Back alignment and structure |
|---|
Score = 99 bits (250), Expect = 9e-25
Identities = 43/216 (19%), Positives = 79/216 (36%), Gaps = 10/216 (4%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAK-TQIKSVVVDF 113
ALVTG GIG + A L + G +V+ + + V I+A + IK+ +
Sbjct: 21 ALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQ- 79
Query: 114 SGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
++ + ++ LD+ ++N G+ + +V + + +N G V
Sbjct: 80 VPEIVKLFDQAVAHFGHLDI--AVSNSGV-VSFGHL-KDVTEEEFDRVFSLNTRGQFFVA 135
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
+ + + G IV S + P +S+Y+ +K +D F R + I V
Sbjct: 136 REAYRHL--TEGGRIVLTSSNTSKDFSV-PKHSLYSGSKGAVDSFVRIFSKDCGDKKITV 192
Query: 234 QCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWI 269
P T M + T A +
Sbjct: 193 NAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMA 228
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247 | Back alignment and structure |
|---|
Score = 99.5 bits (249), Expect = 9e-25
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 27/201 (13%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
A+VTG + G+GK+ A++L G N+VL G L ++ +A A + D
Sbjct: 8 AIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKA--AGINVVVAKGDVK 65
Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVN 165
D++ V+ +A +D+ L+NN GI+ R D ++LK +++ N
Sbjct: 66 NPEDVENMVKTAMDAFGRIDI--LVNNAGIT----R-----DTLMLKMSEKDWDDVLNTN 114
Query: 166 VEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV-IPSDPLYSVYAATKAYIDQFSRSLYV 224
++ T+AV MLK+K G I+NI S I I + + YAA+KA + F++S+
Sbjct: 115 LKSAYLCTKAVSKIMLKQKSGKIINITS---IAGIIGNAGQANYAASKAGLIGFTKSIAK 171
Query: 225 EYRKSGIDVQCQVPLYVATKM 245
E+ GI P + T M
Sbjct: 172 EFAAKGIYCNAVAPGIIKTDM 192
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246 | Back alignment and structure |
|---|
Score = 99.1 bits (248), Expect = 1e-24
Identities = 56/201 (27%), Positives = 98/201 (48%), Gaps = 27/201 (13%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
ALVTG + GIG+S A QLA+ G N+ + + +K + V + I+A ++ + +
Sbjct: 7 ALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKA--KGVDSFAIQANVA 64
Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVN 165
++ ++ + LDV L+NN GI+ R D +L++ ++I N
Sbjct: 65 DADEVKAMIKEVVSQFGSLDV--LVNNAGIT----R-----DNLLMRMKEQEWDDVIDTN 113
Query: 166 VEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV-IPSDPLYSVYAATKAYIDQFSRSLYV 224
++G Q P ML+++ GAI+N+ S +V +P + Y ATKA + ++S
Sbjct: 114 LKGVFNCIQKATPQMLRQRSGAIINLSS---VVGAVGNPGQANYVATKAGVIGLTKSAAR 170
Query: 225 EYRKSGIDVQCQVPLYVATKM 245
E GI V P ++ + M
Sbjct: 171 ELASRGITVNAVAPGFIVSDM 191
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285 | Back alignment and structure |
|---|
Score = 99.7 bits (249), Expect = 1e-24
Identities = 43/207 (20%), Positives = 76/207 (36%), Gaps = 30/207 (14%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKS------- 108
++G + GIG + A ++A G N+ LV ++ + + +I A +I+
Sbjct: 12 MFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYT--AAKEIEEAGGQALP 69
Query: 109 VVVD--FSGDLDEGVERIKEAIEGLDVGVLINNVGI-------SYPYARFFHEVDQVLLK 159
+V D + V + E G+D+ +NN P RF D +
Sbjct: 70 IVGDIRDGDAVAAAVAKTVEQFGGIDI--CVNNASAINLGSIEEVPLKRF----DLM--- 120
Query: 160 NLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFS 219
+ V GT V+Q+ +P M R I+ + + P + Y K + +
Sbjct: 121 --NGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRL-EPKWLRPTPYMMAKYGMTLCA 177
Query: 220 RSLYVEYRKSGIDVQCQVPLYVATKMA 246
+ E R +GI P A
Sbjct: 178 LGIAEELRDAGIASNTLWPRTTVATAA 204
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246 | Back alignment and structure |
|---|
Score = 98.7 bits (247), Expect = 1e-24
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 27/201 (13%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
ALVTG + GIG++ A LAK G N+V+ N K +V D I+ + +V D +
Sbjct: 7 ALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKK--LGSDAIAVRADVA 64
Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVN 165
D+ V++ + +D+ L+NN G++ + D +L++ +I N
Sbjct: 65 NAEDVTNMVKQTVDVFGQVDI--LVNNAGVT----K-----DNLLMRMKEEEWDTVINTN 113
Query: 166 VEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV-IPSDPLYSVYAATKAYIDQFSRSLYV 224
++G T+AV M++++ G IVNI S +V + +P + Y A KA + +++
Sbjct: 114 LKGVFLCTKAVSRFMMRQRHGRIVNIAS---VVGVTGNPGQANYVAAKAGVIGLTKTSAK 170
Query: 225 EYRKSGIDVQCQVPLYVATKM 245
E I V P ++AT M
Sbjct: 171 ELASRNITVNAIAPGFIATDM 191
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255 | Back alignment and structure |
|---|
Score = 98.8 bits (247), Expect = 1e-24
Identities = 37/193 (19%), Positives = 69/193 (35%), Gaps = 9/193 (4%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK-DVSDSIQAKYAKTQIKSVVVDFS 114
+TG GIG + LA+ G ++ + R ++ D+S + A + +V+
Sbjct: 4 IAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETA---VAAVLDRCG 60
Query: 115 GDLDEGVER--IKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
G LD V + + V +N G+S + + + V T+
Sbjct: 61 GVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQP 120
Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
A LP + G A + + YA +K + +R V++ G+
Sbjct: 121 GAAELPMVEAMLAGDEARAIELAEQQGQT---HLAYAGSKYAVTCLARRNVVDWAGRGVR 177
Query: 233 VQCQVPLYVATKM 245
+ P V T +
Sbjct: 178 LNVVAPGAVETPL 190
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241 | Back alignment and structure |
|---|
Score = 98.2 bits (245), Expect = 2e-24
Identities = 26/192 (13%), Positives = 59/192 (30%), Gaps = 17/192 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
LV G +G + + ++ S ++ + F+
Sbjct: 10 VLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVK----------MTDSFTE 59
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
D+ + + + V ++ G + + K ++ +T +
Sbjct: 60 QADQVTAEVGKLLGDQKVDAILCVAGGWAGGNA-KSKSLFKNCDLMWKQSIWTSTISSHL 118
Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR--KSGIDV 233
+ ++ G + G+ AA+ P Y K + Q +SL + SG
Sbjct: 119 ATKHL--KEGGLLTLAGAKAALD--GTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAA 174
Query: 234 QCQVPLYVATKM 245
+P+ + T M
Sbjct: 175 IAVLPVTLDTPM 186
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269 | Back alignment and structure |
|---|
Score = 98.8 bits (247), Expect = 2e-24
Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 27/201 (13%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
ALVTG + GIG++ A +LA G + + + +V +I A A + +V D S
Sbjct: 31 ALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAA--AGGEAFAVKADVS 88
Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVN 165
+++ + E LDV L+NN GI R D +LL+ +++ +N
Sbjct: 89 QESEVEALFAAVIERWGRLDV--LVNNAGI----TR-----DTLLLRMKRDDWQSVLDLN 137
Query: 166 VEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV-IPSDPLYSVYAATKAYIDQFSRSLYV 224
+ G ++A MLK++ G I+NI S +V +P + Y+A KA + ++++
Sbjct: 138 LGGVFLCSRAAAKIMLKQRSGRIINIAS---VVGEMGNPGQANYSAAKAGVIGLTKTVAK 194
Query: 225 EYRKSGIDVQCQVPLYVATKM 245
E GI V P ++AT M
Sbjct: 195 ELASRGITVNAVAPGFIATDM 215
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244 | Back alignment and structure |
|---|
Score = 97.6 bits (244), Expect = 3e-24
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 27/201 (13%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
+VTG + GIGK+ A L K G +++ R+ ++VS I+A Q + D S
Sbjct: 4 VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEA--YGGQAITFGGDVS 61
Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVN 165
D++ ++ +A +DV ++NN GI+ R D +L++ +I +N
Sbjct: 62 KEADVEAMMKTAIDAWGTIDV--VVNNAGIT----R-----DTLLIRMKKSQWDEVIDLN 110
Query: 166 VEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV-IPSDPLYSVYAATKAYIDQFSRSLYV 224
+ G TQA M+K++KG I+NI S +V + + + YAA KA + FS++
Sbjct: 111 LTGVFLCTQAATKIMMKKRKGRIINIAS---VVGLIGNIGQANYAAAKAGVIGFSKTAAR 167
Query: 225 EYRKSGIDVQCQVPLYVATKM 245
E I+V P ++A+ M
Sbjct: 168 EGASRNINVNVVCPGFIASDM 188
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264 | Back alignment and structure |
|---|
Score = 98.0 bits (245), Expect = 4e-24
Identities = 43/200 (21%), Positives = 82/200 (41%), Gaps = 21/200 (10%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
AL+T T G+GK +L G ++ + + ++ + ++ + + +++ V D +
Sbjct: 10 ALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKD--VEERLQFVQADVT 67
Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVN 165
DL + VE +D LINN G + L+ +I+ N
Sbjct: 68 KKEDLHKIVEEAMSHFGKIDF--LINNAG--PYVFE-----RKKLVDYEEDEWNEMIQGN 118
Query: 166 VEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
+ + + V+P M K+ G I+N G A P S +AA K + ++++ E
Sbjct: 119 LTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYE 178
Query: 226 YRKSGIDVQCQVPLYVATKM 245
+ GI P + +M
Sbjct: 179 EAEYGITANMVCPGDIIGEM 198
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263 | Back alignment and structure |
|---|
Score = 96.8 bits (242), Expect = 1e-23
Identities = 43/199 (21%), Positives = 77/199 (38%), Gaps = 30/199 (15%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
LVTG GIG++ A+ G +LV V R L + + + +VV D S
Sbjct: 9 ILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEA-----VAALEAEAIAVVADVSD 63
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVNV 166
++ E L + + G+ A + +++VN+
Sbjct: 64 PKAVEAVFAEALEEFGRLH--GVAHFAGV----AH-----SALSWNLPLEAWEKVLRVNL 112
Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
G+ V + + + G++V GS A + + YAA K + +R+L +E
Sbjct: 113 TGSFLVARKAGEVL--EEGGSLVLTGSVAGLGAFGL---AHYAAGKLGVVGLARTLALEL 167
Query: 227 RKSGIDVQCQVPLYVATKM 245
+ G+ V +P + T M
Sbjct: 168 ARKGVRVNVLLPGLIQTPM 186
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236 | Back alignment and structure |
|---|
Score = 96.2 bits (240), Expect = 1e-23
Identities = 27/192 (14%), Positives = 63/192 (32%), Gaps = 17/192 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
+V G +G + K G ++ + + + D + + +++
Sbjct: 6 VIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDG----------NKNWTE 55
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
+E+ +++G V + G + + +IK +V + +
Sbjct: 56 QEQSILEQTASSLQGSQVDGVFCVAGGWAGGSA-SSKDFVKNADLMIKQSVWSSAIAAKL 114
Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR--KSGIDV 233
+ + G + G+ AA+ P Y KA + + SL + V
Sbjct: 115 ATTHL--KPGGLLQLTGAAAAMG--PTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAV 170
Query: 234 QCQVPLYVATKM 245
+P+ + T M
Sbjct: 171 LTIMPVTLDTPM 182
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 96.7 bits (241), Expect = 1e-23
Identities = 49/207 (23%), Positives = 83/207 (40%), Gaps = 21/207 (10%)
Query: 56 ALVTGPTDGIGKSFAFQLAKT---GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
L+TG G+G L +L RN ++ K++ D + ++ I + +
Sbjct: 24 ILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAKNHSNIHILEIDLR 82
Query: 113 FSGDLDEGVERIKEA--IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
D+ V I+ +GL+V L NN GI+ AR V L + ++ N
Sbjct: 83 NFDAYDKLVADIEGVTKDQGLNV--LFNNAGIAPKSARI-TAVRSQELLDTLQTNTVVPI 139
Query: 171 KVTQAVLPGMLKRKK-----------GAIVNIGSGAA-IVIPSDPLYSVYAATKAYIDQF 218
+ +A LP + K K AI+N+ S I +D Y +K+ ++
Sbjct: 140 MLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAA 199
Query: 219 SRSLYVEYRKSGIDVQCQVPLYVATKM 245
++SL V+ I P +V T M
Sbjct: 200 TKSLSVDLYPQRIMCVSLHPGWVKTDM 226
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276 | Back alignment and structure |
|---|
Score = 96.5 bits (241), Expect = 1e-23
Identities = 38/211 (18%), Positives = 70/211 (33%), Gaps = 24/211 (11%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIK-----SV 109
A++TG IG S A +L + G +V+ R + + + + A A + + S+
Sbjct: 14 AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSL 73
Query: 110 VVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKN--------- 160
++ ++ A DV L+NN YP +
Sbjct: 74 SSSLLDCCEDIIDCSFRAFGRCDV--LVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAE 131
Query: 161 LIKVNVEGTTKVTQAVLP-----GMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYI 215
L N + +A G + + ++VN+ + P + VY K +
Sbjct: 132 LFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDL--PLPGFCVYTMAKHAL 189
Query: 216 DQFSRSLYVEYRKSGIDVQCQVPLYVATKMA 246
+R+ +E I V P A
Sbjct: 190 GGLTRAAALELAPRHIRVNAVAPGLSLLPPA 220
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255 | Back alignment and structure |
|---|
Score = 96.1 bits (240), Expect = 2e-23
Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 19/199 (9%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
ALVTG + GIG++ A +LA G + + G ++ ++ IQ+ S+ +
Sbjct: 10 ALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSA--FSIGANLE 67
Query: 115 --GDLDEGVERIKEAIE------GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNV 166
++ + ++ D+ LINN GI P A E + ++ VN
Sbjct: 68 SLHGVEALYSSLDNELQNRTGSTKFDI--LINNAGI-GPGAFI-EETTEQFFDRMVSVNA 123
Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
+ + Q L + R I+NI S A + S P + Y+ TK I+ + +L +
Sbjct: 124 KAPFFIIQQALSRL--RDNSRIINISSAATRI--SLPDFIAYSMTKGAINTMTFTLAKQL 179
Query: 227 RKSGIDVQCQVPLYVATKM 245
GI V +P +V T M
Sbjct: 180 GARGITVNAILPGFVKTDM 198
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253 | Back alignment and structure |
|---|
Score = 95.6 bits (239), Expect = 2e-23
Identities = 45/196 (22%), Positives = 79/196 (40%), Gaps = 20/196 (10%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI--QAKYAKTQIKSVVVDF 113
ALVTG G+G L G + N + ++ + ++ + V D
Sbjct: 9 ALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMF-------VRHDV 61
Query: 114 S--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
S D + ++ + L+ VL+NN GI P L+K+N E
Sbjct: 62 SSEADWTLVMAAVQRRLGTLN--VLVNNAGILLP--GDMETGRLEDFSRLLKINTESVFI 117
Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
Q + M K G+I+N+ S ++ + Y+ Y+A+KA + +R+ + RK G
Sbjct: 118 GCQQGIAAM-KETGGSIINMASVSSWL--PIEQYAGYSASKAAVSALTRAAALSCRKQGY 174
Query: 232 DVQCQV--PLYVATKM 245
++ P + T M
Sbjct: 175 AIRVNSIHPDGIYTPM 190
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328 | Back alignment and structure |
|---|
Score = 96.7 bits (241), Expect = 3e-23
Identities = 37/215 (17%), Positives = 64/215 (29%), Gaps = 41/215 (19%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKY------------- 101
ALVTG +G+S A L G + L R+ + +S ++ A+
Sbjct: 49 ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 108
Query: 102 -AKTQIKSVVVDFSGDLDEGVER-IKEAIE---GLDVGVLINNVGISYP----------- 145
A + L + D VL+NN YP
Sbjct: 109 VATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCD--VLVNNASSFYPTPLLRNDEDGH 166
Query: 146 -YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGML------KRKKGAIVNIGSGAAIV 198
E + +L N + +A + + +I+N+
Sbjct: 167 EPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQ 226
Query: 199 IPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
Y++Y K ++ +RS +E I V
Sbjct: 227 --PLLGYTIYTMAKGALEGLTRSAALELAPLQIRV 259
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291 | Back alignment and structure |
|---|
Score = 95.5 bits (238), Expect = 5e-23
Identities = 37/215 (17%), Positives = 64/215 (29%), Gaps = 41/215 (19%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKY------------- 101
ALVTG +G+S A L G + L R+ + +S ++ A+
Sbjct: 12 ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 71
Query: 102 -AKTQIKSVVVDFSGDLDEGVER-IKEAIE---GLDVGVLINNVGISYP----------- 145
A + L + DV L+NN YP
Sbjct: 72 VATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDV--LVNNASSFYPTPLLRNDEDGH 129
Query: 146 -YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGML------KRKKGAIVNIGSGAAIV 198
E + +L N + +A + + +I+N+
Sbjct: 130 EPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQ 189
Query: 199 IPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
Y++Y K ++ +RS +E I V
Sbjct: 190 PL--LGYTIYTMAKGALEGLTRSAALELAPLQIRV 222
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202 | Back alignment and structure |
|---|
Score = 91.9 bits (229), Expect = 2e-22
Identities = 23/193 (11%), Positives = 59/193 (30%), Gaps = 33/193 (17%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK-DVSDSIQAKYAKTQIKSVVVDFS 114
L+ G + +G + +L K ++ GR+ + D+++
Sbjct: 6 ILLIGASGTLGSAVKERLEKKA-EVITAGRHSGDVTVDITNI------------------ 46
Query: 115 GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
+ ++++ E + +D +++ G + E+ I + G +
Sbjct: 47 ----DSIKKMYEQVGKVDA--IVSATGSATFSP--LTELTPEKNAVTISSKLGGQINLVL 98
Query: 175 AVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQ 234
+ + KG+ + A + F++S +E GI +
Sbjct: 99 LGIDSL--NDKGSFTLTTGIMMED--PIVQGASAAMANGAVTAFAKSAAIEM-PRGIRIN 153
Query: 235 CQVPLYVATKMAS 247
P +
Sbjct: 154 TVSPNVLEESWDK 166
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250 | Back alignment and structure |
|---|
Score = 93.2 bits (232), Expect = 2e-22
Identities = 45/210 (21%), Positives = 84/210 (40%), Gaps = 26/210 (12%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVG--RNPDKLKDVSDSIQAKYAKTQIKSVVVDF 113
+VTG GIG QL K ++ R+ +K ++ +++ + +
Sbjct: 6 VVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATEL-----KSIKDSRVHVLPLTV 60
Query: 114 S--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
+ LD V ++ E + + +LINN G+ Y E ++ ++ + VN
Sbjct: 61 TCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNT-EPNRAVIAEQLDVNTTSVVL 119
Query: 172 VTQAVLPGMLK-----------RKKGAIVNIGSGAA-IVIPSDPLYSV----YAATKAYI 215
+TQ +LP + + A++ I SG I + Y +KA I
Sbjct: 120 LTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAI 179
Query: 216 DQFSRSLYVEYRKSGIDVQCQVPLYVATKM 245
+ F R+L V+ + + V P +V T +
Sbjct: 180 NMFGRTLAVDLKDDNVLVVNFCPGWVQTNL 209
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299 | Back alignment and structure |
|---|
Score = 94.2 bits (235), Expect = 2e-22
Identities = 45/205 (21%), Positives = 83/205 (40%), Gaps = 22/205 (10%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLV------------GRNPDKLKDVSDSIQAKYAK 103
A +TG G G+S A LA+ G +++ + PD L + ++A
Sbjct: 31 AFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEA--LG 88
Query: 104 TQIKSVVVDFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNL 161
+I + VD + V+ + LD +++ N ++ R + +D +++
Sbjct: 89 RRIIASQVDVRDFDAMQAAVDDGVTQLGRLD--IVLANAALASEGTR-LNRMDPKTWRDM 145
Query: 162 IKVNVEGTTKVTQAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSR 220
I VN+ G + +P ++ K+ G+IV S + Y A+K + R
Sbjct: 146 IDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLR--GAENIGNYIASKHGLHGLMR 203
Query: 221 SLYVEYRKSGIDVQCQVPLYVATKM 245
++ +E I V P VAT M
Sbjct: 204 TMALELGPRNIRVNIVCPSSVATPM 228
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260 | Back alignment and structure |
|---|
Score = 93.4 bits (233), Expect = 2e-22
Identities = 30/192 (15%), Positives = 63/192 (32%), Gaps = 17/192 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
L+TG + +G A +L + G +++ R ++ A + DFS
Sbjct: 30 ILITGASQRVGLHCALRLLEHGHRVIISYRTEH---ASVTELRQAGAVA----LYGDFSC 82
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
+ ++ +K L +++N E D + V++ +
Sbjct: 83 ETGIMAFIDLLKTQTSSLRA--VVHNASEWLA-ETPGEEADN--FTRMFSVHMLAPYLIN 137
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
P + + IV+I + Y ATKA ++ + S + + V
Sbjct: 138 LHCEPLLTASEVADIVHISDDVTRK--GSSKHIAYCATKAGLESLTLSFAARF-APLVKV 194
Query: 234 QCQVPLYVATKM 245
P + +
Sbjct: 195 NGIAPALLMFQP 206
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 93.5 bits (233), Expect = 2e-22
Identities = 38/200 (19%), Positives = 69/200 (34%), Gaps = 24/200 (12%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIK-----SV 109
A+VTG IG++ A +L +TG +V+ + + ++D + + + T + +
Sbjct: 26 AVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTN 85
Query: 110 VVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKN--------L 161
+E + A D VL+NN YP + + L
Sbjct: 86 SNVLPASCEEIINSCFRAFGRCD--VLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAEL 143
Query: 162 IKVNVEGTTKVTQAVLPGM------LKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYI 215
I N +T + +IVN+ P +S+Y K +
Sbjct: 144 IGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMV-DQPC-MAFSLYNMGKHAL 201
Query: 216 DQFSRSLYVEYRKSGIDVQC 235
++S +E GI V
Sbjct: 202 VGLTQSAALELAPYGIRVNG 221
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277 | Back alignment and structure |
|---|
Score = 93.4 bits (233), Expect = 3e-22
Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 24/206 (11%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLV-------------GRNPDKLKDVSDSIQAKYA 102
A +TG G G++ A ++A G +++ V +PD L + ++A A
Sbjct: 14 AFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEA--A 71
Query: 103 KTQIKSVVVDFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKN 160
+I + VVD L + V+ A+ LD +++ N G++ P + + ++ ++
Sbjct: 72 NRRIVAAVVDTRDFDRLRKVVDDGVAALGRLD--IIVANAGVAAP--QAWDDITPEDFRD 127
Query: 161 LIKVNVEGTTKVTQAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFS 219
++ +NV GT A P +++ + G+I+ I S A + P Y A+K + +
Sbjct: 128 VMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMK--MQPFMIHYTASKHAVTGLA 185
Query: 220 RSLYVEYRKSGIDVQCQVPLYVATKM 245
R+ E K I V P V T M
Sbjct: 186 RAFAAELGKHSIRVNSVHPGPVNTPM 211
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253 | Back alignment and structure |
|---|
Score = 92.2 bits (230), Expect = 4e-22
Identities = 51/200 (25%), Positives = 87/200 (43%), Gaps = 37/200 (18%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
LVTG GIG + A A G + + R+ + +V D +
Sbjct: 24 VLVTGGNRGIGLAIARAFADAGDKVAITYRSGE-------------PPEGFLAVKCDITD 70
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVNV 166
+++ + I+E ++V LI N G++ + DQ+L++ ++++ N+
Sbjct: 71 TEQVEQAYKEIEETHGPVEV--LIANAGVT----K-----DQLLMRMSEEDFTSVVETNL 119
Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV-IPSDPLYSVYAATKAYIDQFSRSLYVE 225
GT +V + ML+ KKG +V I S +V + + YAA+KA + F+RSL E
Sbjct: 120 TGTFRVVKRANRAMLRAKKGRVVLISS---VVGLLGSAGQANYAASKAGLVGFARSLARE 176
Query: 226 YRKSGIDVQCQVPLYVATKM 245
I P +V T M
Sbjct: 177 LGSRNITFNVVAPGFVDTDM 196
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247 | Back alignment and structure |
|---|
Score = 91.8 bits (229), Expect = 5e-22
Identities = 49/199 (24%), Positives = 81/199 (40%), Gaps = 35/199 (17%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
LVTG GIG + A +LA G + + R A + V VD +
Sbjct: 18 VLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSG-------------APKGLFGVEVDVTD 64
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVNV 166
+D ++E ++V L++N G+S D L++ +I N+
Sbjct: 65 SDAVDRAFTAVEEHQGPVEV--LVSNAGLS----A-----DAFLMRMTEEKFEKVINANL 113
Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
G +V Q M + K G ++ IGS + + + YAA+KA + +RS+ E
Sbjct: 114 TGAFRVAQRASRSMQRNKFGRMIFIGSVSGLW--GIGNQANYAASKAGVIGMARSIAREL 171
Query: 227 RKSGIDVQCQVPLYVATKM 245
K+ + P Y+ T M
Sbjct: 172 SKANVTANVVAPGYIDTDM 190
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286 | Back alignment and structure |
|---|
Score = 91.5 bits (228), Expect = 1e-21
Identities = 49/209 (23%), Positives = 84/209 (40%), Gaps = 26/209 (12%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLV----------------GRNPDKLKDVSDSIQA 99
A VTG G G+S A +LA+ G +++ V P+ L + +D ++
Sbjct: 14 AFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKG 73
Query: 100 KYAKTQIKSVVVDFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVL 157
+I + VD L V+ E + LD+ ++ N GI + +
Sbjct: 74 --HNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDI--IVANAGIG-NGGDTLDKTSEED 128
Query: 158 LKNLIKVNVEGTTKVTQAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYSVYAATKAYID 216
+I +N+ G K +A +P M+ + G+I+ S + + P Y A K +
Sbjct: 129 WTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLK--AYPHTGHYVAAKHGVV 186
Query: 217 QFSRSLYVEYRKSGIDVQCQVPLYVATKM 245
R+ VE + I V P +V T M
Sbjct: 187 GLMRAFGVELGQHMIRVNSVHPTHVKTPM 215
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281 | Back alignment and structure |
|---|
Score = 91.0 bits (227), Expect = 2e-21
Identities = 52/211 (24%), Positives = 83/211 (39%), Gaps = 36/211 (17%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGR------------NPDKLKDVSDSIQAKYAK 103
AL+TG G+G+S A LA+ G ++ + R D L + ++
Sbjct: 13 ALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEK--TG 70
Query: 104 TQIKSVVVDFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARF-------FHEVD 154
+ S VD L+ V ++ + G+D+ I N GIS A + EV
Sbjct: 71 RRCISAKVDVKDRAALESFVAEAEDTLGGIDI--AITNAGIS-TIALLPEVESAQWDEV- 126
Query: 155 QVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAY 214
I N+ GT AV PGM+KR G IV + S ++ + Y ++K
Sbjct: 127 -------IGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHS--ANFAQASYVSSKWG 177
Query: 215 IDQFSRSLYVEYRKSGIDVQCQVPLYVATKM 245
+ ++ + GI V P + T M
Sbjct: 178 VIGLTKCAAHDLVGYGITVNAVAPGNIETPM 208
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 4e-21
Identities = 40/217 (18%), Positives = 71/217 (32%), Gaps = 55/217 (25%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK-DVSDSIQAKYAKTQIKSVVVDFS 114
+++G GIG + L G +V + ++ D+S + K A I V+ S
Sbjct: 4 IVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIADLSTAEGRKQA---IADVLAKCS 60
Query: 115 GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
+D L+ G+ +L N++ VN G T++
Sbjct: 61 KGMD----------------GLVLCAGLGPQTK---------VLGNVVSVNYFGATELMD 95
Query: 175 AVLPGMLKRKKGAIVNIGSGAAIVIPSDPL--------------------------YSVY 208
A LP + K + A V I S A+ + D Y
Sbjct: 96 AFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAY 155
Query: 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKM 245
A +K + R + ++G+ + P T +
Sbjct: 156 AGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPL 192
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278 | Back alignment and structure |
|---|
Score = 89.9 bits (224), Expect = 5e-21
Identities = 45/208 (21%), Positives = 78/208 (37%), Gaps = 29/208 (13%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLV------------GRNPDKLKDVSDSIQAKYAK 103
A +TG G G++ A +LA G +++ V P++L ++
Sbjct: 16 AFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVED--IG 73
Query: 104 TQIKSVVVDFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEV-DQVLLKN 160
++I + D L ++ + + LD +++ N GI+ + V
Sbjct: 74 SRIVARQADVRDRESLSAALQAGLDELGRLD--IVVANAGIAPM--SAGDDGWHDV---- 125
Query: 161 LIKVNVEGTTKVTQAVLPGMLKRKK-GAIVNIGSGAAIV--IPSDPLYSVYAATKAYIDQ 217
I VN+ G + +P ++K+ G+IV I S A + +DP Y A K +
Sbjct: 126 -IDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVG 184
Query: 218 FSRSLYVEYRKSGIDVQCQVPLYVATKM 245
R I V P V T M
Sbjct: 185 LMRVYANLLAGQMIRVNSIHPSGVETPM 212
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280 | Back alignment and structure |
|---|
Score = 89.5 bits (223), Expect = 7e-21
Identities = 51/228 (22%), Positives = 91/228 (39%), Gaps = 24/228 (10%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLV-------------GRNPDKLKDVSDSIQAKYA 102
A +TG G G+S A +LA G +++ +P+ L + + ++ +
Sbjct: 18 AFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGR 77
Query: 103 KTQIKSVVVDFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKN 160
K + V+D L E V E LD V++ N G+ E+
Sbjct: 78 K--ALTRVLDVRDDAALRELVADGMEQFGRLD--VVVANAGVLSW--GRVWELTDEQWDT 131
Query: 161 LIKVNVEGTTKVTQAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFS 219
+I VN+ GT + +A +P M++ G+IV + S A + + P Y+A+K + +
Sbjct: 132 VIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLK--ATPGNGHYSASKHGLTALT 189
Query: 220 RSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMR 267
+L +E + GI V P V T M + + +
Sbjct: 190 NTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPP 237
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317 | Back alignment and structure |
|---|
Score = 89.6 bits (223), Expect = 1e-20
Identities = 49/212 (23%), Positives = 90/212 (42%), Gaps = 37/212 (17%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLV------------GRNPDKLKDVSDSIQAKYAK 103
A +TG G G++ A +LA+ G ++V + +P++LK+ ++ + +
Sbjct: 49 AFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRR 108
Query: 104 TQIKSVVVDFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARF-------FHEVD 154
I + D L V+ +D +L++NVGIS + ++
Sbjct: 109 --IIARQADVRDLASLQAVVDEALAEFGHID--ILVSNVGIS-NQGEVVSLTDQQWSDI- 162
Query: 155 QVLLKNLIKVNVEGTTKVTQAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYSVYAATKA 213
++ N+ G +AVLP M++R + G+++ + S + P S YAA+K
Sbjct: 163 -------LQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLR--GAPGQSHYAASKH 213
Query: 214 YIDQFSRSLYVEYRKSGIDVQCQVPLYVATKM 245
+ SL E + I V P V T+M
Sbjct: 214 GVQGLMLSLANEVGRHNIRVNSVNPGAVNTEM 245
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287 | Back alignment and structure |
|---|
Score = 88.1 bits (219), Expect = 2e-20
Identities = 42/214 (19%), Positives = 71/214 (33%), Gaps = 35/214 (16%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLV------------GRNPDKLKDVSDSIQAKYAK 103
LVTG G G+S A +LA+ G +++L L++ ++
Sbjct: 13 VLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEK--TG 70
Query: 104 TQIKSVVVDFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEV-DQVLLKN 160
+ + VD + + LDV ++ N GI A +
Sbjct: 71 RKAYTAEVDVRDRAAVSRELANAVAEFGKLDV--VVANAGICPLGAHLPVQAFADA---- 124
Query: 161 LIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV---------IPSDPLYSVYAAT 211
V+ G A LP + +I+ GS A ++ P P + Y+
Sbjct: 125 -FDVDFVGVINTVHAALPYLTSG--ASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYA 181
Query: 212 KAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKM 245
K +D ++ L + I P V T M
Sbjct: 182 KQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDM 215
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454 | Back alignment and structure |
|---|
Score = 89.3 bits (222), Expect = 4e-20
Identities = 43/210 (20%), Positives = 80/210 (38%), Gaps = 48/210 (22%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
A+VTG GIG + A A+ G +V + + + ++ K ++ +D +
Sbjct: 216 AVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-----EDLKRVADKVGGTALTLDVT- 269
Query: 116 DLDEGVERIKEAIE--GLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVNV 166
D + E G V +L+NN GI+ R D++L +I VN+
Sbjct: 270 ADDAVDKITAHVTEHHGGKVDILVNNAGIT----R-----DKLLANMDEKRWDAVIAVNL 320
Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV-----------YAATKAYI 215
++T+ ++ + G ++ + S + YA TKA +
Sbjct: 321 LAPQRLTEGLVGNGTIGEGGRVIGLSS-------------MAGIAGNRGQTNYATTKAGM 367
Query: 216 DQFSRSLYVEYRKSGIDVQCQVPLYVATKM 245
+ +L GI + P ++ TKM
Sbjct: 368 IGLAEALAPVLADKGITINAVAPGFIETKM 397
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294 | Back alignment and structure |
|---|
Score = 84.9 bits (211), Expect = 4e-19
Identities = 58/199 (29%), Positives = 85/199 (42%), Gaps = 23/199 (11%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSV---VVD 112
ALVTG GIG++ A A+ G ++ + P + +D A+ K I+ V
Sbjct: 52 ALVTGGDSGIGRAAAIAYAREGADVAINYL-PAEEED------AQQVKALIEECGRKAVL 104
Query: 113 FSGDL-DEG-----VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNV 166
GDL DE V + +EA+ GLD+ L G ++ + VNV
Sbjct: 105 LPGDLSDESFARSLVHKAREALGGLDI--LALVAGKQTAIPEI-KDLTSEQFQQTFAVNV 161
Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
+TQ +P + K +I+ S A PS P YAATKA I +SR L +
Sbjct: 162 FALFWITQEAIPLL--PKGASIITTSSIQAY-QPS-PHLLDYAATKAAILNYSRGLAKQV 217
Query: 227 RKSGIDVQCQVPLYVATKM 245
+ GI V P + T +
Sbjct: 218 AEKGIRVNIVAPGPIWTAL 236
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319 | Back alignment and structure |
|---|
Score = 84.7 bits (210), Expect = 6e-19
Identities = 47/204 (23%), Positives = 90/204 (44%), Gaps = 29/204 (14%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVL--VGRNPDKLKDVSDSIQAKYAKTQIKSV---- 109
LVTG G+G+++A A+ G +V+ +G + S A +I+
Sbjct: 12 VLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKG--VGKGSSAADKVVEEIRRRGGKA 69
Query: 110 VVDFSGDLDEGVERIKEAIE---GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNV 166
V ++ ++ G + +K A++ +DV ++NN GI R F + + +V++
Sbjct: 70 VANY-DSVEAGEKLVKTALDTFGRIDV--VVNNAGILRD--RSFSRISDEDWDIIQRVHL 124
Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY-----SVYAATKAYIDQFSRS 221
G+ +VT+A M K+ G I+ S + +Y + Y+A K + + +
Sbjct: 125 RGSFQVTRAAWDHMKKQNYGRIIMTASASG-------IYGNFGQANYSAAKLGLLGLANT 177
Query: 222 LYVEYRKSGIDVQCQVPLYVATKM 245
L +E RK+ I P ++M
Sbjct: 178 LVIEGRKNNIHCNTIAPN-AGSRM 200
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604 | Back alignment and structure |
|---|
Score = 83.2 bits (206), Expect = 7e-18
Identities = 50/198 (25%), Positives = 91/198 (45%), Gaps = 21/198 (10%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-PDKLKDVSDSIQAKYAKTQIKSVVV 111
L+TG G+GK +A AK G +V+ N D I+A +
Sbjct: 322 DKVVLITGAGAGLGKEYAKWFAKYGAKVVV---NDFKDATKTVDEIKAAGGE------AW 372
Query: 112 DFSGDLDEGVERI-KEAIE---GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVE 167
D+ + E I K I+ +D+ L+NN GI R F ++ + ++ +V++
Sbjct: 373 PDQHDVAKDSEAIIKNVIDKYGTIDI--LVNNAGILRD--RSFAKMSKQEWDSVQQVHLI 428
Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
GT +++ P ++++ G I+NI S + I + + Y+++KA I S+++ +E
Sbjct: 429 GTFNLSRLAWPYFVEKQFGRIINITSTSGIY--GNFGQANYSSSKAGILGLSKTMAIEGA 486
Query: 228 KSGIDVQCQVPLYVATKM 245
K+ I V P + T M
Sbjct: 487 KNNIKVNIVAP-HAETAM 503
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604 | Back alignment and structure |
|---|
Score = 82.8 bits (205), Expect = 1e-17
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 35/207 (16%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVL---------VGRNPDKLKDVSDSIQAKYAKTQI 106
++TG G+GK ++ + AK G +V+ G N V D I
Sbjct: 11 VIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV--- 67
Query: 107 KSVVVDFSGDLDEGVERIKEAIE---GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIK 163
V D+ ++ +G + ++ A++ + V +INN GI ++ + K +I
Sbjct: 68 --AVADY-NNVLDGDKIVETAVKNFGTVHV--IINNAGILRD--ASMKKMTEKDYKLVID 120
Query: 164 VNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY-----SVYAATKAYIDQF 218
V++ G VT+A P K+K G IVN S A LY + YA+ K+ + F
Sbjct: 121 VHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAG-------LYGNFGQANYASAKSALLGF 173
Query: 219 SRSLYVEYRKSGIDVQCQVPLYVATKM 245
+ +L E K I PL ++M
Sbjct: 174 AETLAKEGAKYNIKANAIAPL-ARSRM 199
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613 | Back alignment and structure |
|---|
Score = 82.5 bits (204), Expect = 1e-17
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 25/202 (12%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVL---------VGRNPDKLKDVSDSIQAKYAKTQI 106
A+VTG G+G+ +A A+ G +V+ G + V D I+ +
Sbjct: 22 AVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE--- 78
Query: 107 KSVVVDFSGDLDEGVERIKEAIE---GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIK 163
V + +G + I+ AI+ +D+ L+NN GI R + + +
Sbjct: 79 ---AVADYNSVIDGAKVIETAIKAFGRVDI--LVNNAGILRD--RSLVKTSEQDWNLVND 131
Query: 164 VNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLY 223
V+++G+ K TQA P M K+ G I+ S + I + Y A K + + ++
Sbjct: 132 VHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIY--GNFGQVNYTAAKMGLIGLANTVA 189
Query: 224 VEYRKSGIDVQCQVPLYVATKM 245
+E ++ + VP A++M
Sbjct: 190 IEGARNNVLCNVIVPT-AASRM 210
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276 | Back alignment and structure |
|---|
Score = 79.7 bits (197), Expect = 2e-17
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 13/144 (9%)
Query: 56 ALVTGPTDGIGKSFAFQLAK-TGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
ALVTG GIG + L + ++VL R+ + + +QA+ + +D
Sbjct: 7 ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLS--PRFHQLDID 64
Query: 115 GDLD---EGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
DL + +++ GLD VL+NN GI++ A + + +K N GT
Sbjct: 65 -DLQSIRALRDFLRKEYGGLD--VLVNNAGIAFKVAD--PTPFHIQAEVTMKTNFFGTRD 119
Query: 172 VTQAVLPGMLKRKKGAIVNIGSGA 195
V +LP L + +G +VN+ S
Sbjct: 120 VCTELLP--LIKPQGRVVNVSSIM 141
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291 | Back alignment and structure |
|---|
Score = 77.2 bits (191), Expect = 2e-16
Identities = 51/187 (27%), Positives = 80/187 (42%), Gaps = 24/187 (12%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSV---VVD 112
L+TG GIG++ + AK G N+ + L + D A K ++ V
Sbjct: 50 VLITGGDSGIGRAVSIAFAKEGANIAIA-----YLDEEGD---ANETKQYVEKEGVKCVL 101
Query: 113 FSGDL-DEG-----VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNV 166
GDL DE V+ + L++ L+NNV YP + L+ ++N+
Sbjct: 102 LPGDLSDEQHCKDIVQETVRQLGSLNI--LVNNVAQQYPQQGL-EYITAEQLEKTFRINI 158
Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
VT+A L + ++ I+N S A ++ L Y+ATK I F+RSL
Sbjct: 159 FSYFHVTKAALSHL--KQGDVIINTASIVA-YEGNETLID-YSATKGAIVAFTRSLSQSL 214
Query: 227 RKSGIDV 233
+ GI V
Sbjct: 215 VQKGIRV 221
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281 | Back alignment and structure |
|---|
Score = 76.6 bits (189), Expect = 3e-16
Identities = 41/206 (19%), Positives = 79/206 (38%), Gaps = 24/206 (11%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI--QAKYAKTQIKSVV 110
G+ A+V+G G+G++ +L GL +V+ +K K ++D + +A++ T + S
Sbjct: 30 GASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTS-- 87
Query: 111 VDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYP---YARFFHEVDQVLLKNLIKVNVE 167
+ +E + ++ + G R D I + +
Sbjct: 88 ---EDSVLAAIEAANQLGRLRY--AVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLN 142
Query: 168 GTTKVTQAVLPGMLKRK------KGAIVNIGSGAAIV--IPSDPLYSVYAATKAYIDQFS 219
GT V + V + + +GA+V S A I + YAA KA + +
Sbjct: 143 GTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQ----TAYAAAKAGVIGLT 198
Query: 220 RSLYVEYRKSGIDVQCQVPLYVATKM 245
+ + +GI V P + T +
Sbjct: 199 IAAARDLSSAGIRVNTIAPGTMKTPI 224
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257 | Back alignment and structure |
|---|
Score = 75.0 bits (185), Expect = 7e-16
Identities = 40/208 (19%), Positives = 75/208 (36%), Gaps = 29/208 (13%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI--QAKYAKTQIKSVV 110
+VTG + G+G + LA+ G ++ + P ++ + + ++ + +
Sbjct: 7 SRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTN-- 64
Query: 111 VDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFF-----HEVDQVLLKNLIKVN 165
D + K+ + L+N G + + H +D + VN
Sbjct: 65 ---EADATAALAFAKQEFGHVH--GLVNCAGTAPG-EKILGRSGPHALDS--FARTVAVN 116
Query: 166 VEGTTKVTQAVLPGMLKRK------KGAIVNIGSGAAIVIPSDPLY--SVYAATKAYIDQ 217
+ GT + + M + + +G IVN S AA D + YAA+K +
Sbjct: 117 LIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAF----DGQIGQAAYAASKGGVAA 172
Query: 218 FSRSLYVEYRKSGIDVQCQVPLYVATKM 245
+ E + GI V P T M
Sbjct: 173 LTLPAARELARFGIRVVTIAPGIFDTPM 200
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311 | Back alignment and structure |
|---|
Score = 75.4 bits (185), Expect = 9e-16
Identities = 35/171 (20%), Positives = 63/171 (36%), Gaps = 34/171 (19%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
A+VTG GIG QL+ G+ +VL R+ K + + ++ + + +D +
Sbjct: 15 AVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHE-NVVFHQLDVTD 73
Query: 116 DLD---EGVERIKEAIEGLDVGVLINNVGISYP--------------------------- 145
+ + IK LD+ L+NN G++
Sbjct: 74 PIATMSSLADFIKTHFGKLDI--LVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEK 131
Query: 146 -YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGA 195
A+ L + +K+N G VT+ ++P + IVN+ S
Sbjct: 132 PEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSST 182
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265 | Back alignment and structure |
|---|
Score = 73.8 bits (182), Expect = 2e-15
Identities = 43/210 (20%), Positives = 82/210 (39%), Gaps = 31/210 (14%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI--QAKYAKTQIKSVV 110
G A++TG G+G + A +L G + VL+ + + + +A + S
Sbjct: 12 GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTS-- 69
Query: 111 VDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFF-------HEVDQVLLKNLIK 163
D+ + K +D V +N GI+ ++ + H ++ + ++
Sbjct: 70 ---EKDVQTALALAKGKFGRVD--VAVNCAGIAVA-SKTYNLKKGQTHTLED--FQRVLD 121
Query: 164 VNVEGTTKVTQAVLPGMLKRK------KGAIVNIGSGAAIVIPSDPLY--SVYAATKAYI 215
VN+ GT V + V M + + +G I+N S AA + + Y+A+K I
Sbjct: 122 VNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAF----EGQVGQAAYSASKGGI 177
Query: 216 DQFSRSLYVEYRKSGIDVQCQVPLYVATKM 245
+ + + GI V P T +
Sbjct: 178 VGMTLPIARDLAPIGIRVMTIAPGLFGTPL 207
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322 | Back alignment and structure |
|---|
Score = 71.2 bits (175), Expect = 3e-14
Identities = 55/217 (25%), Positives = 78/217 (35%), Gaps = 45/217 (20%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVL--VGRNPDKLKDVSDSIQAKYAKTQIKS----- 108
+VTG GIG++ A A G +V+ +G D S A+ +I +
Sbjct: 30 VIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDG-SPASGGSAAQSVVDEITAAGGEA 88
Query: 109 -VVVDFSGDLDEGVERIKEAIE---GLDVGVLINNVGISYPYARFFH-----EVDQVLLK 159
D D+ I+ A+E GLD VL+NN GI R E D V
Sbjct: 89 VADGSNVADWDQAAGLIQTAVETFGGLD--VLVNNAGIVRD--RMIANTSEEEFDAV--- 141
Query: 160 NLIKVNVEGTTKVTQAVLPGM------LKRKKGAIVNIGSGAAIVIPSDPLY-----SVY 208
I V+++G + K G I+N SGA L Y
Sbjct: 142 --IAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAG-------LQGSVGQGNY 192
Query: 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKM 245
+A KA I + E + G+ V P T+M
Sbjct: 193 SAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRM 228
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242 | Back alignment and structure |
|---|
Score = 62.2 bits (152), Expect = 1e-11
Identities = 42/204 (20%), Positives = 75/204 (36%), Gaps = 37/204 (18%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
ALVTG G+G++ A L G +V++ + Y + +
Sbjct: 5 ALVTGGASGLGRAAALALKARGYRVVVLDLRREGE-------DLIYVEGDVTR------- 50
Query: 116 DLDEGVER-IKEAIEGLDVGVLINNVGISYPYARFF-----HEVDQVLLKNLIKVNVEGT 169
+E V R + A E + +++ G+ + H ++ + +++VN+ GT
Sbjct: 51 --EEDVRRAVARAQEEAPLFAVVSAAGVGLA-EKILGKEGPHGLES--FRRVLEVNLLGT 105
Query: 170 TKVTQAVLPGMLKRK------KGAIVNIGSGAAIVIPSDPLY--SVYAATKAYIDQFSRS 221
V + M + +G IVN S AA + + YAA+K + +
Sbjct: 106 FNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAF----EGQIGQAAYAASKGGVVALTLP 161
Query: 222 LYVEYRKSGIDVQCQVPLYVATKM 245
E GI V P T +
Sbjct: 162 AARELAGWGIRVVTVAPGLFDTPL 185
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257 | Back alignment and structure |
|---|
Score = 59.9 bits (146), Expect = 1e-10
Identities = 33/209 (15%), Positives = 73/209 (34%), Gaps = 33/209 (15%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
+ A+VTG G+G + +L G +V++ + + + + D
Sbjct: 9 DAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV--------VADLGDRARFAAAD 60
Query: 113 FSGDLDEGVERIKEAIEGL-DVGVLINNVGISYPYARFF-----HEVDQVLLKNLIKVNV 166
+ + V + E + + +++N G R + + ++ +N+
Sbjct: 61 VT--DEAAVASALDLAETMGTLRIVVNCAGTGNA-IRVLSRDGVFSLAA--FRKIVDINL 115
Query: 167 EGTTKVTQAVLPGMLKRK--------KGAIVNIGSGAAIVIPSDPLY--SVYAATKAYID 216
G+ V + + K + +G I+N S AA D + Y+A+K +
Sbjct: 116 VGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAF----DGQIGQAAYSASKGGVV 171
Query: 217 QFSRSLYVEYRKSGIDVQCQVPLYVATKM 245
+ + + I V P T +
Sbjct: 172 GMTLPIARDLASHRIRVMTIAPGLFDTPL 200
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291 | Back alignment and structure |
|---|
Score = 57.2 bits (139), Expect = 1e-09
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
++TG G+G A +LA+ G +++ R+ K + + ++ Q++ +D
Sbjct: 19 VVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAG-----QVEVRELDLQ- 72
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYP 145
DL V R + + G D VLINN GI
Sbjct: 73 DLS-SVRRFADGVSGAD--VLINNAGIMAV 99
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287 | Back alignment and structure |
|---|
Score = 53.7 bits (129), Expect = 2e-08
Identities = 29/146 (19%), Positives = 51/146 (34%), Gaps = 19/146 (13%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G A+V T +G A LA G +VL GR DK + +DS+ ++ ++ +
Sbjct: 119 GKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF---KVNVTAAE 175
Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
+ D EA++G +G+ + Q +N + +
Sbjct: 176 TADD-----ASRAEAVKGAHFVFTAGAIGLE--------LLPQAAWQNESSIEIVADYNA 222
Query: 173 TQ-AVLPGMLKRKKGAIVN--IGSGA 195
+ G+ KG GA
Sbjct: 223 QPPLGIGGIDATDKGKEYGGKRAFGA 248
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 320 | |||
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 100.0 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 100.0 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 100.0 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 100.0 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 100.0 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 100.0 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 100.0 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 100.0 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 100.0 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 100.0 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 100.0 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 100.0 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 100.0 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 100.0 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 100.0 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 100.0 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 100.0 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 100.0 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 100.0 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 100.0 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 100.0 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 100.0 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 100.0 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 100.0 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 100.0 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 100.0 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 100.0 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 100.0 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 100.0 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 100.0 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 100.0 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 100.0 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 100.0 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 100.0 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 100.0 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 100.0 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 100.0 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 100.0 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 100.0 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 100.0 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 100.0 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 100.0 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 100.0 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 100.0 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 100.0 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 100.0 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 100.0 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 100.0 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 100.0 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 100.0 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 100.0 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 100.0 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 100.0 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 100.0 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 100.0 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 100.0 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 100.0 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 100.0 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 100.0 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 100.0 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 100.0 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 100.0 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 100.0 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 100.0 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 100.0 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 100.0 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 100.0 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 100.0 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 100.0 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 100.0 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 100.0 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 100.0 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 100.0 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 100.0 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 100.0 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 100.0 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 100.0 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 100.0 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 100.0 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 100.0 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 100.0 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 100.0 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 100.0 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 100.0 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 100.0 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 100.0 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 100.0 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 100.0 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 100.0 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 100.0 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 100.0 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 100.0 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 100.0 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 100.0 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 100.0 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 100.0 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 100.0 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 100.0 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 100.0 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 100.0 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 100.0 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 100.0 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 100.0 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 100.0 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 100.0 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 100.0 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 100.0 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 100.0 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 100.0 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 100.0 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 100.0 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 100.0 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 100.0 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 100.0 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 100.0 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 100.0 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 100.0 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 100.0 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 100.0 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 100.0 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 100.0 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 100.0 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 100.0 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 100.0 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 100.0 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 100.0 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 100.0 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 100.0 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 100.0 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 100.0 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 100.0 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 100.0 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 100.0 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 100.0 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 100.0 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 100.0 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 100.0 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 100.0 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 100.0 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 100.0 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 100.0 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 100.0 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 100.0 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 100.0 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 100.0 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 100.0 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 100.0 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 100.0 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 100.0 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 100.0 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 100.0 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 100.0 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 100.0 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 100.0 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 100.0 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 100.0 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 100.0 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 100.0 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 100.0 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 100.0 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 100.0 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 100.0 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 100.0 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 100.0 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 100.0 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 100.0 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 100.0 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 100.0 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 100.0 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 100.0 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 100.0 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 100.0 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 100.0 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 100.0 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 100.0 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 100.0 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 100.0 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 100.0 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 100.0 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 100.0 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 100.0 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 100.0 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 100.0 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 100.0 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 100.0 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 100.0 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 100.0 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 100.0 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 100.0 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 100.0 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 100.0 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 100.0 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 100.0 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 100.0 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 100.0 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 100.0 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 100.0 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 100.0 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 100.0 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 100.0 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 99.98 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.98 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.97 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.97 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.97 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.97 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.97 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.96 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.96 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.95 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.95 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.95 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.94 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.94 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 99.93 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.92 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.91 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.88 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.87 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.87 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.87 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.87 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 99.86 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.85 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.85 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.85 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.85 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.84 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.84 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.84 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.83 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.83 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.83 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.83 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 99.82 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.82 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.82 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.82 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.82 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.82 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.81 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.81 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.81 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.81 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.81 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.8 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.8 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.79 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.79 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.79 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.79 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.79 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.79 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.78 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.78 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.78 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.78 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.78 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.78 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.77 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.77 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.77 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.77 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.76 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.76 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.76 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.75 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.75 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.74 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.74 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.74 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.74 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.74 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.73 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.73 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.72 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.71 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.7 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.7 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.7 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.7 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.69 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.68 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.67 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.67 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.66 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.66 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.65 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.63 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.62 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.59 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.57 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.55 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.55 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.53 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.51 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.51 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.5 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.49 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.42 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.42 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.4 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.39 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.39 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.35 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.26 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 99.25 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 99.17 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 98.93 | |
| 3ond_A | 488 | Adenosylhomocysteinase; plant protein, enzyme-subs | 98.8 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 98.77 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 98.72 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 98.6 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 98.54 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 98.53 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 98.53 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 98.51 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 98.51 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 98.5 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 98.47 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 98.46 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 98.45 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 98.41 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 98.38 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 98.33 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 98.32 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 98.29 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 98.27 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 98.23 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 98.22 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 98.22 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 98.2 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 98.2 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.19 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 98.16 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 98.16 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 98.14 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 98.08 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 98.07 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 98.07 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 98.05 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 97.99 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 97.98 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 97.98 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 97.97 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 97.96 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 97.95 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 97.92 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 97.91 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 97.88 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 97.86 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 97.75 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 97.72 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 97.7 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 97.7 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 97.7 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 97.64 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 97.63 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 97.62 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 97.61 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 97.58 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 97.55 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 97.53 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 97.52 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 97.5 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 97.5 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 97.5 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 97.46 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 97.44 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 97.37 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 97.35 | |
| 2fzw_A | 373 | Alcohol dehydrogenase class III CHI chain; S-nitro | 97.35 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 97.35 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 97.32 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 97.31 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 97.31 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 97.3 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 97.29 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 97.27 | |
| 1e3i_A | 376 | Alcohol dehydrogenase, class II; HET: NAD; 2.08A { | 97.27 | |
| 1vj0_A | 380 | Alcohol dehydrogenase, zinc-containing; TM0436, st | 97.25 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 97.21 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 97.21 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 97.19 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 97.19 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 97.15 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 97.13 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 97.13 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 97.12 | |
| 3iup_A | 379 | Putative NADPH:quinone oxidoreductase; YP_296108.1 | 97.08 | |
| 1f8f_A | 371 | Benzyl alcohol dehydrogenase; rossmann fold, oxido | 97.07 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 97.06 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 97.06 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 97.05 | |
| 3uko_A | 378 | Alcohol dehydrogenase class-3; alcohol dehydrogena | 97.04 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 97.04 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 97.02 | |
| 4dvj_A | 363 | Putative zinc-dependent alcohol dehydrogenase Pro; | 97.0 | |
| 1p9o_A | 313 | Phosphopantothenoylcysteine synthetase; ligase; 2. | 97.0 | |
| 3fpc_A | 352 | NADP-dependent alcohol dehydrogenase; oxydoreducta | 96.99 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 96.97 | |
| 3fbt_A | 282 | Chorismate mutase and shikimate 5-dehydrogenase fu | 96.95 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 96.94 | |
| 2jhf_A | 374 | Alcohol dehydrogenase E chain; oxidoreductase, met | 96.94 | |
| 3tum_A | 269 | Shikimate dehydrogenase family protein; rossmann-f | 96.94 | |
| 1pl8_A | 356 | Human sorbitol dehydrogenase; NAD, oxidoreductase; | 96.93 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 96.92 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 96.9 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 96.88 | |
| 1kol_A | 398 | Formaldehyde dehydrogenase; oxidoreductase; HET: N | 96.87 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 96.85 | |
| 3rui_A | 340 | Ubiquitin-like modifier-activating enzyme ATG7; au | 96.82 | |
| 1p0f_A | 373 | NADP-dependent alcohol dehydrogenase; ADH topology | 96.8 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 96.78 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 96.76 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 96.74 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 96.71 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 96.68 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 96.67 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 96.67 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 96.67 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 96.62 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 96.58 | |
| 4eez_A | 348 | Alcohol dehydrogenase 1; site-saturation mutagenes | 96.55 | |
| 3ldh_A | 330 | Lactate dehydrogenase; oxidoreductase, CHOH donor, | 96.54 | |
| 3jv7_A | 345 | ADH-A; dehydrogenase, nucleotide binding, rossmann | 96.52 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 96.51 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 96.41 | |
| 4gsl_A | 615 | Ubiquitin-like modifier-activating enzyme ATG7; ub | 96.41 | |
| 2zqz_A | 326 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ro | 96.4 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 96.38 | |
| 4h7p_A | 345 | Malate dehydrogenase; ssgcid, structural G seattle | 96.32 | |
| 1zsy_A | 357 | Mitochondrial 2-enoyl thioester reductase; medium- | 96.29 | |
| 1ez4_A | 318 | Lactate dehydrogenase; rossmann fold, oxidoreducta | 96.26 | |
| 1leh_A | 364 | Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi | 96.26 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 96.26 | |
| 3nep_X | 314 | Malate dehydrogenase; halophIle, molecular adpatat | 96.25 | |
| 2v6b_A | 304 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ra | 96.23 | |
| 3pp8_A | 315 | Glyoxylate/hydroxypyruvate reductase A; structural | 96.22 | |
| 3vh1_A | 598 | Ubiquitin-like modifier-activating enzyme ATG7; au | 96.22 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 96.21 | |
| 1tt7_A | 330 | YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st | 96.2 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 96.19 | |
| 3hhp_A | 312 | Malate dehydrogenase; MDH, citric acid cycle, TCA | 96.17 | |
| 3nx4_A | 324 | Putative oxidoreductase; csgid, structural genomic | 96.15 | |
| 1y8q_A | 346 | Ubiquitin-like 1 activating enzyme E1A; SUMO, hete | 96.08 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 96.02 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 95.97 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 95.94 | |
| 1tt5_B | 434 | Ubiquitin-activating enzyme E1C isoform 1; cell cy | 95.94 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 95.91 | |
| 3ngx_A | 276 | Bifunctional protein fold; methylenetetrahydrofola | 95.9 | |
| 2gcg_A | 330 | Glyoxylate reductase/hydroxypyruvate reductase; NA | 95.89 | |
| 2x0j_A | 294 | Malate dehydrogenase; oxidoreductase, hyperthermop | 95.89 | |
| 2d5c_A | 263 | AROE, shikimate 5-dehydrogenase; substrate, dimer, | 95.88 | |
| 2ekl_A | 313 | D-3-phosphoglycerate dehydrogenase; structural gen | 95.8 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 95.79 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 95.78 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 95.78 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 95.76 | |
| 1wwk_A | 307 | Phosphoglycerate dehydrogenase; riken structural g | 95.76 | |
| 4a5o_A | 286 | Bifunctional protein fold; oxidoreductase, hydrola | 95.74 | |
| 1y8q_B | 640 | Anthracycline-, ubiquitin-like 2 activating enzyme | 95.72 | |
| 2xxj_A | 310 | L-LDH, L-lactate dehydrogenase; oxidoreductase, hy | 95.7 | |
| 4a26_A | 300 | Putative C-1-tetrahydrofolate synthase, cytoplasm; | 95.69 | |
| 3gvx_A | 290 | Glycerate dehydrogenase related protein; NYSGXRC, | 95.67 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 95.67 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 95.64 | |
| 1npy_A | 271 | Hypothetical shikimate 5-dehydrogenase-like protei | 95.63 | |
| 4a2c_A | 346 | Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc | 95.6 | |
| 4dgs_A | 340 | Dehydrogenase; structural genomics, PSI-biology, N | 95.59 | |
| 3l07_A | 285 | Bifunctional protein fold; structural genomics, ID | 95.59 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 95.54 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 95.54 | |
| 1b0a_A | 288 | Protein (fold bifunctional protein); folate, dehyd | 95.44 | |
| 1a5z_A | 319 | L-lactate dehydrogenase; oxidoreductase, glycolysi | 95.41 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 95.41 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 95.38 | |
| 2g76_A | 335 | 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor | 95.37 | |
| 2pv7_A | 298 | T-protein [includes: chorismate mutase (EC 5.4.99 | 95.35 | |
| 3tri_A | 280 | Pyrroline-5-carboxylate reductase; amino acid bios | 95.35 | |
| 1a4i_A | 301 | Methylenetetrahydrofolate dehydrogenase / methenyl | 95.31 | |
| 2d4a_B | 308 | Malate dehydrogenase; archaea, hyperthermophIle, o | 95.3 | |
| 3jtm_A | 351 | Formate dehydrogenase, mitochondrial; mitochondrio | 95.27 | |
| 1guz_A | 310 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 95.19 | |
| 2dbq_A | 334 | Glyoxylate reductase; D-3-phosphoglycerate dehydro | 95.17 | |
| 1lld_A | 319 | L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N | 95.16 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 95.16 | |
| 4a27_A | 349 | Synaptic vesicle membrane protein VAT-1 homolog-L; | 95.13 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 95.07 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 95.0 |
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-48 Score=340.20 Aligned_cols=230 Identities=26% Similarity=0.256 Sum_probs=200.7
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++++||++|||||++|||+++|++|+++|++|++++|++++++++.+++++. +.++..+++|++|. +++.++++.+
T Consensus 3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~~ 80 (254)
T 4fn4_A 3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM--GKEVLGVKADVSKKKDVEEFVRRTFE 80 (254)
T ss_dssp GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999999999999999999876 45789999999984 4677888888
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
+++++| +||||||+..+ ..++.+.+.++|++++++|+.|+++++|+++|+|+++++|+|||+||.++.. +.++.+
T Consensus 81 ~~G~iD--iLVNNAGi~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~--~~~~~~ 155 (254)
T 4fn4_A 81 TYSRID--VLCNNAGIMDG-VTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIR--GGFAGA 155 (254)
T ss_dssp HHSCCC--EEEECCCCCCT-TCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC--SSSSCH
T ss_pred HcCCCC--EEEECCcccCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcC--CCCCCh
Confidence 888755 99999998653 3678999999999999999999999999999999999999999999999998 788999
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHH-hCCCCcccCCchHHHHH
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRW-IGYEPCCTPYWPHSFIW 285 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~-l~~~~~~~~~~~~~~~~ 285 (320)
+|++||+|+.+|+|+|+.|++++|||||+|+||+|+|||.... ...+++..+..... .+.+|...|++++.++.
T Consensus 156 ~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~-----~~~~~~~~~~~~~~~~~~~R~g~pediA~~v~ 230 (254)
T 4fn4_A 156 PYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGS-----SKPSELGMRTLTKLMSLSSRLAEPEDIANVIV 230 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSC-----SSCCHHHHHHHHHHHTTCCCCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccc-----cCCcHHHHHHHHhcCCCCCCCcCHHHHHHHHH
Confidence 9999999999999999999999999999999999999997642 12233333443433 34578899999999998
Q ss_pred HHHhh
Q 020854 286 GVLSI 290 (320)
Q Consensus 286 ~l~~~ 290 (320)
||++-
T Consensus 231 fLaSd 235 (254)
T 4fn4_A 231 FLASD 235 (254)
T ss_dssp HHHSG
T ss_pred HHhCc
Confidence 88763
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-48 Score=339.09 Aligned_cols=228 Identities=23% Similarity=0.288 Sum_probs=204.4
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++++||+++||||++|||+++|+.|+++|++|++++|+.+++++..+++.+. +.++..+++|++|+ +++.++++.+
T Consensus 5 f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (255)
T 4g81_D 5 FDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK--GYDAHGVAFDVTDELAIEAAFSKLDA 82 (255)
T ss_dssp TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT--TCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence 4688999999999999999999999999999999999999999999999876 45788999999985 3666777777
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC-CCcEEEEEcCccccccCCCCCc
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-~~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
++++ +|+||||||+... .++.+.+.++|++++++|+.|+++++|+++|+|.++ ++|+|||+||.++.. +.|+.
T Consensus 83 ~~G~--iDiLVNNAG~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~--~~~~~ 156 (255)
T 4g81_D 83 EGIH--VDILINNAGIQYR--KPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQA--ARPTV 156 (255)
T ss_dssp TTCC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS--BCTTC
T ss_pred HCCC--CcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcC--CCCCc
Confidence 7775 5599999998765 789999999999999999999999999999999754 679999999999998 78899
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHH
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIW 285 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~ 285 (320)
++|++||+|+.+|+|+|+.|++++|||||+|+||+|+|||.... .+.++..+.+.+.++.+|...|++++.++.
T Consensus 157 ~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~------~~~~~~~~~~~~~~Pl~R~g~pediA~~v~ 230 (255)
T 4g81_D 157 APYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTAL------IEDKQFDSWVKSSTPSQRWGRPEELIGTAI 230 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHH------HTCHHHHHHHHHHSTTCSCBCGGGGHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcc------cCCHHHHHHHHhCCCCCCCcCHHHHHHHHH
Confidence 99999999999999999999999999999999999999998642 234567777888899999999999999999
Q ss_pred HHHhh
Q 020854 286 GVLSI 290 (320)
Q Consensus 286 ~l~~~ 290 (320)
||++-
T Consensus 231 fL~S~ 235 (255)
T 4g81_D 231 FLSSK 235 (255)
T ss_dssp HHHSG
T ss_pred HHhCc
Confidence 98763
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-47 Score=329.13 Aligned_cols=223 Identities=22% Similarity=0.241 Sum_probs=190.7
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
++++||++|||||++|||+++|+.|+++|++|++++|+.+ ++..+++.+. +.++..+++|++|+ +.++++.+ +
T Consensus 5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~--g~~~~~~~~Dv~d~--~~v~~~~~-~ 77 (247)
T 4hp8_A 5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKD--GGNASALLIDFADP--LAAKDSFT-D 77 (247)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHT--TCCEEEEECCTTST--TTTTTSST-T
T ss_pred cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHh--CCcEEEEEccCCCH--HHHHHHHH-h
Confidence 5788999999999999999999999999999999999864 3455666655 45788999999986 22222222 2
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccccCCCCCchh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
+ ++|+||||||+... .++.+.++++|++++++|+.|+++++|+++|+|.+++ .|+|||+||.++.. +.++.++
T Consensus 78 g--~iDiLVNNAGi~~~--~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~--g~~~~~~ 151 (247)
T 4hp8_A 78 A--GFDILVNNAGIIRR--ADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQ--GGIRVPS 151 (247)
T ss_dssp T--CCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS--CCSSCHH
T ss_pred C--CCCEEEECCCCCCC--CCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCC--CCCCChH
Confidence 3 57799999999765 7899999999999999999999999999999998764 79999999999998 7899999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHH
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGV 287 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l 287 (320)
|++||+|+.+|+|+|+.||+++|||||+|+||+|+|||.... ...++..+.+.+.++.+|...|++++.++.||
T Consensus 152 Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~------~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fL 225 (247)
T 4hp8_A 152 YTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEAL------RADAARNKAILERIPAGRWGHSEDIAGAAVFL 225 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH------HTSHHHHHHHHTTCTTSSCBCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhc------ccCHHHHHHHHhCCCCCCCcCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998641 12344556677888888999999999999988
Q ss_pred Hhh
Q 020854 288 LSI 290 (320)
Q Consensus 288 ~~~ 290 (320)
++-
T Consensus 226 aSd 228 (247)
T 4hp8_A 226 SSA 228 (247)
T ss_dssp TSG
T ss_pred hCc
Confidence 763
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-46 Score=329.94 Aligned_cols=227 Identities=23% Similarity=0.223 Sum_probs=194.8
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++ +.+...+++|++|. +++.++++.++
T Consensus 26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~-----g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 100 (273)
T 4fgs_A 26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI-----GGGAVGIQADSANLAELDRLYEKVKAE 100 (273)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCCeEEEEecCCCHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999888777 45678899999984 46777888888
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
+++ +|+||||||+... .++.+.+.++|++++++|+.|+++++|+++|+|++ .|+||++||.++.. +.|+.++
T Consensus 101 ~G~--iDiLVNNAG~~~~--~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~--~G~IInisS~~~~~--~~~~~~~ 172 (273)
T 4fgs_A 101 AGR--IDVLFVNAGGGSM--LPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR--GSSVVLTGSTAGST--GTPAFSV 172 (273)
T ss_dssp HSC--EEEEEECCCCCCC--CCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGGS--CCTTCHH
T ss_pred cCC--CCEEEECCCCCCC--CChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCeEEEEeehhhcc--CCCCchH
Confidence 885 6799999998764 78999999999999999999999999999999954 58999999999998 7899999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHH
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGV 287 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l 287 (320)
|++||+|+.+|+++|+.||+++|||||+|+||+|+||+........ ....++..+.+.+.++.+|...|++++.++.||
T Consensus 173 Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~-~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~FL 251 (273)
T 4fgs_A 173 YAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKD-PVQQQGLLNALAAQVPMGRVGRAEEVAAAALFL 251 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------C-HHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccC-chhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999976421111 123355667778888999999999999999998
Q ss_pred Hhh
Q 020854 288 LSI 290 (320)
Q Consensus 288 ~~~ 290 (320)
++-
T Consensus 252 aSd 254 (273)
T 4fgs_A 252 ASD 254 (273)
T ss_dssp HSG
T ss_pred hCc
Confidence 863
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-46 Score=323.14 Aligned_cols=214 Identities=26% Similarity=0.321 Sum_probs=186.3
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
++||++|||||++|||+++|++|+++|++|++++|+.+++++. .+.++..+++|++|. +.++++.+++++
T Consensus 9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~--------~~~~~~~~~~Dv~~~--~~v~~~~~~~g~ 78 (242)
T 4b79_A 9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP--------RHPRIRREELDITDS--QRLQRLFEALPR 78 (242)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC--------CCTTEEEEECCTTCH--HHHHHHHHHCSC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh--------hcCCeEEEEecCCCH--HHHHHHHHhcCC
Confidence 4699999999999999999999999999999999998775531 145788999999987 778888888886
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHH
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA 210 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~a 210 (320)
+ |+||||||+.. ++++.+.++|++++++|+.|+++++|+++|+|+++ +|+|||+||.++.. +.++.++|++
T Consensus 79 i--DiLVNNAGi~~----~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~--~~~~~~~Y~a 149 (242)
T 4b79_A 79 L--DVLVNNAGISR----DREEYDLATFERVLRLNLSAAMLASQLARPLLAQR-GGSILNIASMYSTF--GSADRPAYSA 149 (242)
T ss_dssp C--SEEEECCCCCC----GGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-CEEEEEECCGGGTS--CCSSCHHHHH
T ss_pred C--CEEEECCCCCC----CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEeeccccC--CCCCCHHHHH
Confidence 5 49999999853 46789999999999999999999999999998754 69999999999998 7899999999
Q ss_pred HHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHHHh
Q 020854 211 TKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVLS 289 (320)
Q Consensus 211 sKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l~~ 289 (320)
||+|+.+|+|+|+.||+++|||||+|+||+|+|||.... ...++..+.+.+.++.+|...|++++.++.||++
T Consensus 150 sKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~------~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaS 222 (242)
T 4b79_A 150 SKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGL------KADVEATRRIMQRTPLARWGEAPEVASAAAFLCG 222 (242)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----------CCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcc------cCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999997641 2334556777888888999999999999999875
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=319.17 Aligned_cols=229 Identities=21% Similarity=0.224 Sum_probs=189.6
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
+++++||++|||||++|||+++|++|+++|++|++++|+.++.+ ..+++.+. +.++..+++|++|+ +++.++++.
T Consensus 2 ~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~v~~~~ 78 (258)
T 4gkb_A 2 DLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQR--QPRATYLPVELQDDAQCRDAVAQTI 78 (258)
T ss_dssp CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHH--CTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhc--CCCEEEEEeecCCHHHHHHHHHHHH
Confidence 57789999999999999999999999999999999999987754 34555555 45678899999985 467788888
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCc
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
++++++| +||||||+... . ..+.+.++|++++++|+.|+++++|+++|+|+++ +|+|||+||.++.. +.|+.
T Consensus 79 ~~~G~iD--iLVNnAGi~~~--~-~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~--~~~~~ 150 (258)
T 4gkb_A 79 ATFGRLD--GLVNNAGVNDG--I-GLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT-RGAIVNISSKTAVT--GQGNT 150 (258)
T ss_dssp HHHSCCC--EEEECCCCCCC--C-CTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCTHHHH--CCSSC
T ss_pred HHhCCCC--EEEECCCCCCC--C-CccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEeehhhcc--CCCCc
Confidence 8888655 99999998643 3 3478999999999999999999999999999754 59999999999998 78999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCC-CcccCCchHHHH
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYE-PCCTPYWPHSFI 284 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~-~~~~~~~~~~~~ 284 (320)
++|++||+|+.+|+|+|+.|++++|||||+|+||+|+|||.+..... ...+++..+.+...++.+ |...|++++.++
T Consensus 151 ~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~--~~~~~~~~~~~~~~~plg~R~g~peeiA~~v 228 (258)
T 4gkb_A 151 SGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIAT--FEDPEAKLAEIAAKVPLGRRFTTPDEIADTA 228 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-------------CHHHHHHTTCTTTTSCBCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhc--ccChHHHHHHHHhcCCCCCCCcCHHHHHHHH
Confidence 99999999999999999999999999999999999999998742111 123445556666666765 788889999888
Q ss_pred HHHHh
Q 020854 285 WGVLS 289 (320)
Q Consensus 285 ~~l~~ 289 (320)
.||++
T Consensus 229 ~fLaS 233 (258)
T 4gkb_A 229 VFLLS 233 (258)
T ss_dssp HHHHS
T ss_pred HHHhC
Confidence 88876
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-44 Score=311.44 Aligned_cols=211 Identities=19% Similarity=0.272 Sum_probs=178.9
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHcC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEG 130 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~ 130 (320)
+|+||||||++|||+++|++|+++|++|++++|+++++++..++ ..++..+++|++|. +++.++++.+++++
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~ 75 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE------RPNLFYFHGDVADPLTLKKFVEYAMEKLQR 75 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT------CTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh------cCCEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 59999999999999999999999999999999998877655432 34578899999984 46777888888886
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHH
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA 210 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~a 210 (320)
+| +||||||+... .++.+.+.++|++++++|+.|+++++|.++|+|.++ +|+|||+||.++.. +.|+..+|++
T Consensus 76 iD--iLVNNAG~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~-~G~IInisS~~~~~--~~~~~~~Y~a 148 (247)
T 3ged_A 76 ID--VLVNNACRGSK--GILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN-KGRIINIASTRAFQ--SEPDSEAYAS 148 (247)
T ss_dssp CC--EEEECCCCCCC--CGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEECCGGGTS--CCTTCHHHHH
T ss_pred CC--EEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCcEEEEeeccccc--CCCCCHHHHH
Confidence 55 99999998765 789999999999999999999999999999999875 59999999999998 7899999999
Q ss_pred HHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHHHh
Q 020854 211 TKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVLS 289 (320)
Q Consensus 211 sKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l~~ 289 (320)
||+|+.+|+|+|+.|+++ |||||+|+||+|+|++.+. ..+.....++.+|...|++++.++.||++
T Consensus 149 sKaal~~ltk~lA~ela~-~IrVN~I~PG~i~t~~~~~------------~~~~~~~~~Pl~R~g~pediA~~v~fL~s 214 (247)
T 3ged_A 149 AKGGIVALTHALAMSLGP-DVLVNCIAPGWINVTEQQE------------FTQEDCAAIPAGKVGTPKDISNMVLFLCQ 214 (247)
T ss_dssp HHHHHHHHHHHHHHHHTT-TSEEEEEEECSBCCCC---------------CCHHHHHTSTTSSCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCC-CCEEEEEecCcCCCCCcHH------------HHHHHHhcCCCCCCcCHHHHHHHHHHHHh
Confidence 999999999999999987 9999999999999998753 11223344566677777777776666654
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=307.26 Aligned_cols=228 Identities=16% Similarity=0.106 Sum_probs=200.2
Q ss_pred cccCCCEEEEECCCC--cHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHH
Q 020854 49 LRKYGSWALVTGPTD--GIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERI 124 (320)
Q Consensus 49 ~~~~gk~vlITGas~--GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~ 124 (320)
++++||++|||||+| |||+++|++|+++|++|++++|+++.++++.+++.+.+ +.++..+++|++|+ +++.++++
T Consensus 2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~ 80 (256)
T 4fs3_A 2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLN-QPEAHLYQIDVQSDEEVINGFEQI 80 (256)
T ss_dssp CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGT-CSSCEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CCcEEEEEccCCCHHHHHHHHHHH
Confidence 457799999999875 99999999999999999999999999998888776653 55788999999984 36777888
Q ss_pred HHHHcCCCeEEEEEccCCCCC--ccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCC
Q 020854 125 KEAIEGLDVGVLINNVGISYP--YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD 202 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~~~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~ 202 (320)
.++++++| +||||||+... ...++.+.+.++|+..+++|+.+++.+++.+.|++. ++|+||++||.++.. +.
T Consensus 81 ~~~~G~iD--~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~--~~G~IVnisS~~~~~--~~ 154 (256)
T 4fs3_A 81 GKDVGNID--GVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMP--EGGSIVATTYLGGEF--AV 154 (256)
T ss_dssp HHHHCCCS--EEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCT--TCEEEEEEECGGGTS--CC
T ss_pred HHHhCCCC--EEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCEEEEEecccccc--Cc
Confidence 88888655 99999998653 234567889999999999999999999999998774 469999999999998 78
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHH
Q 020854 203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHS 282 (320)
Q Consensus 203 ~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~ 282 (320)
+++..|++||+|+.+|+++|+.|++++|||||+|+||+++|+|.+. ....++..+.+.+.++.+|...|++++.
T Consensus 155 ~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~------~~~~~~~~~~~~~~~Pl~R~g~peevA~ 228 (256)
T 4fs3_A 155 QNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKG------VGGFNTILKEIKERAPLKRNVDQVEVGK 228 (256)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTT------CTTHHHHHHHHHHHSTTSSCCCHHHHHH
T ss_pred ccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhh------ccCCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 9999999999999999999999999999999999999999999864 2456777888888899999999999999
Q ss_pred HHHHHHh
Q 020854 283 FIWGVLS 289 (320)
Q Consensus 283 ~~~~l~~ 289 (320)
++.||++
T Consensus 229 ~v~fL~S 235 (256)
T 4fs3_A 229 TAAYLLS 235 (256)
T ss_dssp HHHHHHS
T ss_pred HHHHHhC
Confidence 9998876
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-44 Score=315.78 Aligned_cols=225 Identities=19% Similarity=0.213 Sum_probs=185.4
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++++||++||||||+|||+++|++|+++|++|++++|+.++. ......+++|++|. ++..++++.+
T Consensus 7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~~ 74 (261)
T 4h15_A 7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG------------LPEELFVEADLTTKEGCAIVAEATRQ 74 (261)
T ss_dssp CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT------------SCTTTEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC------------CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999986421 12234688999984 3667778888
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCC-Cc
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP-LY 205 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~-~~ 205 (320)
+++++| +||||||+......++.+.+.++|++++++|+.|+++++|+++|+|++++.|+||++||.++.. +.| +.
T Consensus 75 ~~G~iD--ilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~--~~~~~~ 150 (261)
T 4h15_A 75 RLGGVD--VIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVL--PLPEST 150 (261)
T ss_dssp HTSSCS--EEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CCTTTC
T ss_pred HcCCCC--EEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhcc--CCCCcc
Confidence 888655 9999999866544678999999999999999999999999999999999999999999999988 554 67
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcccc---CCCCCCCHHHHHH---HHHHHhCCCCcccCCc
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKR---SSFFVPSTDVYAR---AAMRWIGYEPCCTPYW 279 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~---~~~~~~~~~~~a~---~i~~~l~~~~~~~~~~ 279 (320)
..|++||+|+.+|+++|+.|++++|||||+|+||+|+|||..... ......+.+...+ .....++.+|...|++
T Consensus 151 ~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pee 230 (261)
T 4h15_A 151 TAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEE 230 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHH
Confidence 899999999999999999999999999999999999999875310 0011123333333 3334456678899999
Q ss_pred hHHHHHHHHh
Q 020854 280 PHSFIWGVLS 289 (320)
Q Consensus 280 ~~~~~~~l~~ 289 (320)
++.++.||++
T Consensus 231 vA~~v~fLaS 240 (261)
T 4h15_A 231 VANLIAFLAS 240 (261)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHHhC
Confidence 9999888876
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-41 Score=298.29 Aligned_cols=235 Identities=18% Similarity=0.201 Sum_probs=198.6
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..++.++..+.+|++|. +++.++++.+
T Consensus 4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (265)
T 3lf2_A 4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER 83 (265)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 56779999999999999999999999999999999999999999999998766566799999999984 3566677777
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
.+++ +|+||||||.... .++.+.+.++|++++++|+.|++++++.++|+|++++.|+||++||.++.. +.++..
T Consensus 84 ~~g~--id~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~ 157 (265)
T 3lf2_A 84 TLGC--ASILVNNAGQGRV--STFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQ--PEPHMV 157 (265)
T ss_dssp HHCS--CSEEEECCCCCCC--BCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTS--CCTTBH
T ss_pred HcCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCC--CCCCch
Confidence 7776 4599999998754 678899999999999999999999999999999988899999999999998 788899
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccC--CCCCCCHHHHHHHHHHH--hCCCCcccCCchHH
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRS--SFFVPSTDVYARAAMRW--IGYEPCCTPYWPHS 282 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~--~~~~~~~~~~a~~i~~~--l~~~~~~~~~~~~~ 282 (320)
.|++||+|+++|+++|+.|++++||+||+|+||+++|++...... .....++++..+.+... .+.+|...|++...
T Consensus 158 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~ 237 (265)
T 3lf2_A 158 ATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAAR 237 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHHHHHH
Confidence 999999999999999999999999999999999999998763211 11112444544444433 56667788888888
Q ss_pred HHHHHHh
Q 020854 283 FIWGVLS 289 (320)
Q Consensus 283 ~~~~l~~ 289 (320)
.+.+|++
T Consensus 238 ~v~fL~s 244 (265)
T 3lf2_A 238 AILFLAS 244 (265)
T ss_dssp HHHHHHS
T ss_pred HHHHHhC
Confidence 8777765
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-40 Score=295.17 Aligned_cols=229 Identities=24% Similarity=0.252 Sum_probs=191.1
Q ss_pred CcccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHH
Q 020854 46 AKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVER 123 (320)
Q Consensus 46 ~~~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~ 123 (320)
.+.++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+ ..++..+.+|++|. +++.+++
T Consensus 3 ~~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~v~~~~~~ 81 (262)
T 3pk0_A 3 GSMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLG-SGKVIGVQTDVSDRAQCDALAGR 81 (262)
T ss_dssp CCTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTS-SSCEEEEECCTTSHHHHHHHHHH
T ss_pred CCccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC-CCcEEEEEcCCCCHHHHHHHHHH
Confidence 33456789999999999999999999999999999999999999999999887653 35789999999984 3566677
Q ss_pred HHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccc-ccCCC
Q 020854 124 IKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAI-VIPSD 202 (320)
Q Consensus 124 ~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~-~~~~~ 202 (320)
+.+++++ +|+||||||.... .++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++. . +.
T Consensus 82 ~~~~~g~--id~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~--~~ 155 (262)
T 3pk0_A 82 AVEEFGG--IDVVCANAGVFPD--APLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPIT--GY 155 (262)
T ss_dssp HHHHHSC--CSEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTB--CC
T ss_pred HHHHhCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccC--CC
Confidence 7777876 4599999998764 67889999999999999999999999999999998888999999999986 5 67
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHH
Q 020854 203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHS 282 (320)
Q Consensus 203 ~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~ 282 (320)
++...|++||+|+++|+++++.|++++||+||+|+||+++|++... ..++..+.+...++.++...|++...
T Consensus 156 ~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~--------~~~~~~~~~~~~~p~~r~~~p~dva~ 227 (262)
T 3pk0_A 156 PGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLE--------NGEEYIASMARSIPAGALGTPEDIGH 227 (262)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHT--------TCHHHHHHHHTTSTTSSCBCHHHHHH
T ss_pred CCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccc--------cCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 8899999999999999999999999999999999999999998653 12233334444444455555666665
Q ss_pred HHHHHHh
Q 020854 283 FIWGVLS 289 (320)
Q Consensus 283 ~~~~l~~ 289 (320)
++.|+++
T Consensus 228 ~v~~L~s 234 (262)
T 3pk0_A 228 LAAFLAT 234 (262)
T ss_dssp HHHHHHS
T ss_pred HHHHHhC
Confidence 5555543
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-40 Score=293.98 Aligned_cols=226 Identities=21% Similarity=0.249 Sum_probs=188.8
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
.++++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+. +.++..+++|++|. +++.++++.
T Consensus 7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~ 84 (256)
T 3gaf_A 7 PFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA--GGKAIGLECNVTDEQHREAVIKAAL 84 (256)
T ss_dssp TTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999998888765 45788999999985 356677777
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCc
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
+.+++ +|+||||||.... .++ +.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++.. +.++.
T Consensus 85 ~~~g~--id~lv~nAg~~~~--~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~ 157 (256)
T 3gaf_A 85 DQFGK--ITVLVNNAGGGGP--KPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGEN--TNVRM 157 (256)
T ss_dssp HHHSC--CCEEEECCCCCCC--CCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTC--CCTTC
T ss_pred HHcCC--CCEEEECCCCCCC--CCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcC--CCCCc
Confidence 77775 5599999998764 456 88999999999999999999999999999998899999999999988 77889
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHH
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIW 285 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~ 285 (320)
..|++||+|+++|+++++.|++++||+||+|+||+++|++.... . +++..+.+....+.++...|++....+.
T Consensus 158 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~------~-~~~~~~~~~~~~p~~r~~~~~dva~~~~ 230 (256)
T 3gaf_A 158 ASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATV------L-TPEIERAMLKHTPLGRLGEAQDIANAAL 230 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHH------C-CHHHHHHHHTTCTTSSCBCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhc------c-CHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999986531 1 1223333344444445555555555555
Q ss_pred HHHh
Q 020854 286 GVLS 289 (320)
Q Consensus 286 ~l~~ 289 (320)
++++
T Consensus 231 ~L~s 234 (256)
T 3gaf_A 231 FLCS 234 (256)
T ss_dssp HHHS
T ss_pred HHcC
Confidence 5543
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-40 Score=291.39 Aligned_cols=222 Identities=25% Similarity=0.372 Sum_probs=187.2
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.. ....+++|++|. +++.++++.+
T Consensus 5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~Dv~d~~~v~~~~~~~~~ 79 (248)
T 3op4_A 5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD-----NGKGMALNVTNPESIEAVLKAITD 79 (248)
T ss_dssp TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG-----GEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc-----cceEEEEeCCCHHHHHHHHHHHHH
Confidence 457799999999999999999999999999999999999998888777733 467889999984 3566777777
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
.+++ +|+||||||+... .++.+.+.++|++++++|+.|++++++.++|+|.+++.|+||++||.++.. +.++..
T Consensus 80 ~~g~--iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~--~~~~~~ 153 (248)
T 3op4_A 80 EFGG--VDILVNNAGITRD--NLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTM--GNAGQA 153 (248)
T ss_dssp HHCC--CSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH--CCTTCH
T ss_pred HcCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcC--CCCCCh
Confidence 7876 4599999998765 678899999999999999999999999999999988899999999999998 778899
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHH
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWG 286 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~ 286 (320)
.|++||+|+++|+++++.|++++||+||+|+||+++|++.... . ++..+......+.++...|++....+.+
T Consensus 154 ~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-------~-~~~~~~~~~~~p~~r~~~p~dva~~v~~ 225 (248)
T 3op4_A 154 NYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKAL-------N-DEQRTATLAQVPAGRLGDPREIASAVAF 225 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTS-------C-HHHHHHHHHTCTTCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhc-------C-HHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999997631 1 2223333444455566666666666655
Q ss_pred HHh
Q 020854 287 VLS 289 (320)
Q Consensus 287 l~~ 289 (320)
+++
T Consensus 226 L~s 228 (248)
T 3op4_A 226 LAS 228 (248)
T ss_dssp HHS
T ss_pred HcC
Confidence 543
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-40 Score=292.45 Aligned_cols=234 Identities=26% Similarity=0.324 Sum_probs=201.6
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA 127 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 127 (320)
+++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+++..+..+.+|++|. +.++++.++
T Consensus 5 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 82 (267)
T 3t4x_A 5 HMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTE--QGCQDVIEK 82 (267)
T ss_dssp CCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSH--HHHHHHHHH
T ss_pred ccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCH--HHHHHHHHh
Confidence 456789999999999999999999999999999999999999999999998887777889999999986 677888887
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
+++ +|+||||||...+ .++.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||.++.. +.++...
T Consensus 83 ~g~--id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~ 156 (267)
T 3t4x_A 83 YPK--VDILINNLGIFEP--VEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIM--PSQEMAH 156 (267)
T ss_dssp CCC--CSEEEECCCCCCC--CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTS--CCTTCHH
T ss_pred cCC--CCEEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhcc--CCCcchH
Confidence 775 5599999998765 678899999999999999999999999999999998899999999999998 7788999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc---cCCCCCCCHHHHHHHHHHHh----CCCCcccCCch
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK---RSSFFVPSTDVYARAAMRWI----GYEPCCTPYWP 280 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~---~~~~~~~~~~~~a~~i~~~l----~~~~~~~~~~~ 280 (320)
|++||+|+++|+++++.|++++||+||+|+||+++|++.... .......++++..+...... +.+|...|++.
T Consensus 157 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedv 236 (267)
T 3t4x_A 157 YSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEI 236 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHHH
Confidence 999999999999999999999999999999999999986531 11112245555555555443 23578889999
Q ss_pred HHHHHHHHh
Q 020854 281 HSFIWGVLS 289 (320)
Q Consensus 281 ~~~~~~l~~ 289 (320)
..++.+|++
T Consensus 237 A~~v~fL~s 245 (267)
T 3t4x_A 237 AHLVTFLSS 245 (267)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHcC
Confidence 988888776
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-40 Score=290.57 Aligned_cols=215 Identities=19% Similarity=0.169 Sum_probs=177.0
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+. +.++.++.+|++|. +++.++++.+
T Consensus 3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (252)
T 3h7a_A 3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA--GGRIVARSLDARNEDEVTAFLNAADA 80 (252)
T ss_dssp --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECcCCCHHHHHHHHHHHHh
Confidence 4567999999999999999999999999999999999999999999998776 45789999999985 2445555555
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
. + ++|+||||||.... .++.+.+.++|++++++|+.|++.+++.++|.|++++.|+||++||.++.. +.++..
T Consensus 81 ~-g--~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~ 153 (252)
T 3h7a_A 81 H-A--PLEVTIFNVGANVN--FPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLR--GGSGFA 153 (252)
T ss_dssp H-S--CEEEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTC--CCTTCH
T ss_pred h-C--CceEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcC--CCCCCc
Confidence 5 4 57899999998764 678899999999999999999999999999999988889999999999998 788899
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceE-EEEeccceecCCCccccC----------CCCCCCHHHHHHHHHHHhCCC
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDV-QCQVPLYVATKMASIKRS----------SFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v-~~v~PG~v~T~~~~~~~~----------~~~~~~~~~~a~~i~~~l~~~ 272 (320)
.|++||+|+.+|+++|+.|++++||+| |+|+||+|+|+|.....+ .....+||++|+.++..+..+
T Consensus 154 ~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~~~~l~s~~ 230 (252)
T 3h7a_A 154 AFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQMFGKDALANPDLLMPPAAVAGAYWQLYQQP 230 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---------------------------CCHHHHHHHHHHHHHCC
T ss_pred cHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhhhhhhhhcCCccCCCHHHHHHHHHHHHhCc
Confidence 999999999999999999999999999 999999999999763211 112678999999988887654
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-40 Score=291.56 Aligned_cols=228 Identities=29% Similarity=0.372 Sum_probs=191.0
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++..+++|++|. +++.++++.+
T Consensus 16 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~ 94 (266)
T 4egf_A 16 LRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQF-GTDVHTVAIDLAEPDAPAELARRAAE 94 (266)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999888887643 45789999999985 3567777778
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccccCCCCCc
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
.++++ |+||||||.... .++.+.+.++|++++++|+.|++++++.++|.|.+++ .|+||++||.++.. +.++.
T Consensus 95 ~~g~i--d~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~ 168 (266)
T 4egf_A 95 AFGGL--DVLVNNAGISHP--QPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALA--PLPDH 168 (266)
T ss_dssp HHTSC--SEEEEECCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS--CCTTC
T ss_pred HcCCC--CEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhcc--CCCCC
Confidence 88864 599999998765 6788999999999999999999999999999998765 78999999999988 77889
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHH
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIW 285 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~ 285 (320)
..|++||+|+++|+++++.|++++||+||+|+||+|+|+|..... ..++..+.+...++.++...|++....+.
T Consensus 169 ~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~------~~~~~~~~~~~~~p~~r~~~p~dva~~v~ 242 (266)
T 4egf_A 169 YAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVW------GDEAKSAPMIARIPLGRFAVPHEVSDAVV 242 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHT------CSHHHHHHHHTTCTTSSCBCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhc------cChHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 999999999999999999999999999999999999999865311 11233334444445555666666666665
Q ss_pred HHHh
Q 020854 286 GVLS 289 (320)
Q Consensus 286 ~l~~ 289 (320)
++++
T Consensus 243 ~L~s 246 (266)
T 4egf_A 243 WLAS 246 (266)
T ss_dssp HHHS
T ss_pred HHhC
Confidence 5543
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=288.20 Aligned_cols=224 Identities=21% Similarity=0.205 Sum_probs=188.5
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEE-eCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
+||++|||||++|||+++|++|+++|++|+++ +|+.+++++..+++.+. +.++..+++|++|. +++.++++.+.+
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL--GVKVLVVKANVGQPAKIKEMFQQIDETF 80 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 58999999999999999999999999999996 89999999988888764 45789999999985 356677777777
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
++ +|+||||||.... .++.+.+.++|++++++|+.|++++++.++|+|++++.|+||++||.++.. +.++...|
T Consensus 81 g~--id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~--~~~~~~~Y 154 (258)
T 3oid_A 81 GR--LDVFVNNAASGVL--RPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIR--YLENYTTV 154 (258)
T ss_dssp SC--CCEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTS--BCTTCHHH
T ss_pred CC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCC--CCCCcHHH
Confidence 76 5599999998654 678899999999999999999999999999999998899999999999988 67889999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHHH
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVL 288 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l~ 288 (320)
++||+|+++|+++++.|++++||+||+|+||+++|+|.... ...++..+......+.++...|.+....+.+++
T Consensus 155 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~------~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~ 228 (258)
T 3oid_A 155 GVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHF------PNREDLLEDARQNTPAGRMVEIKDMVDTVEFLV 228 (258)
T ss_dssp HHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGC------TTHHHHHHHHHHHCTTSSCBCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhc------ccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999997641 123334444445555555566666666555554
Q ss_pred h
Q 020854 289 S 289 (320)
Q Consensus 289 ~ 289 (320)
+
T Consensus 229 s 229 (258)
T 3oid_A 229 S 229 (258)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=291.75 Aligned_cols=219 Identities=24% Similarity=0.285 Sum_probs=181.9
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
..+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+ +..+..+++|++|. +++.++++.
T Consensus 28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~ 106 (281)
T 4dry_A 28 KGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT-GNIVRAVVCDVGDPDQVAALFAAVR 106 (281)
T ss_dssp ------CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 445779999999999999999999999999999999999999999998887664 34468899999985 356677777
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC--CcEEEEEcCccccccCCCC
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK--KGAIVNIGSGAAIVIPSDP 203 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~--~g~Iv~vsS~~~~~~~~~~ 203 (320)
+.+++ +|+||||||.... ..++.+.+.++|++++++|+.|++++++.++|.|.+++ .|+||++||.++.. +.+
T Consensus 107 ~~~g~--iD~lvnnAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~--~~~ 181 (281)
T 4dry_A 107 AEFAR--LDLLVNNAGSNVP-PVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQT--PRP 181 (281)
T ss_dssp HHHSC--CSEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTC--CCT
T ss_pred HHcCC--CCEEEECCCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCC--CCC
Confidence 77776 4599999998653 35688999999999999999999999999999998875 79999999999988 778
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc----------cCCCCCCCHHHHHHHHHHHhCCC
Q 020854 204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK----------RSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 204 ~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~----------~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
+...|++||+|+++|+++++.|++++||+||+|+||+|+|+|.... .+.....+||++|+.++..+..+
T Consensus 182 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fL~s~~ 260 (281)
T 4dry_A 182 NSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGVLQANGEVAAEPTIPIEHIAEAVVYMASLP 260 (281)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEEECTTSCEEECCCBCHHHHHHHHHHHHHSC
T ss_pred CChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchhhhhhhcccccCCCCHHHHHHHHHHHhCCC
Confidence 8999999999999999999999999999999999999999997631 11223568899999888877655
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-40 Score=293.41 Aligned_cols=228 Identities=21% Similarity=0.301 Sum_probs=197.6
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+. +.++..+.+|++|. +++.++++.+
T Consensus 22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~ 99 (271)
T 4ibo_A 22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNV--GHDAEAVAFDVTSESEIIEAFARLDE 99 (271)
T ss_dssp GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT--TCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999999999999999988765 45688899999985 3556666666
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
.+++ +|+||||||+... .++.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.++.. +.++..
T Consensus 100 ~~g~--iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~--~~~~~~ 173 (271)
T 4ibo_A 100 QGID--VDILVNNAGIQFR--KPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSEL--ARATVA 173 (271)
T ss_dssp HTCC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--BCTTCH
T ss_pred HCCC--CCEEEECCCCCCC--CCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCC--CCCCch
Confidence 6665 5599999998764 678899999999999999999999999999999988889999999999988 678899
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHH
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWG 286 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~ 286 (320)
.|++||+|+++|+++|+.|++++||+||+|+||+++|+|..... ..++..+.+....+.++...|++....+.+
T Consensus 174 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~------~~~~~~~~~~~~~p~~r~~~pedva~~v~~ 247 (271)
T 4ibo_A 174 PYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALI------DNPEFDAWVKARTPAKRWGKPQELVGTAVF 247 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH------HCHHHHHHHHHHSTTCSCBCGGGGHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcc------cCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999976311 113444556666777788889999988888
Q ss_pred HHhh
Q 020854 287 VLSI 290 (320)
Q Consensus 287 l~~~ 290 (320)
+++-
T Consensus 248 L~s~ 251 (271)
T 4ibo_A 248 LSAS 251 (271)
T ss_dssp HHSG
T ss_pred HhCc
Confidence 7653
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-39 Score=283.12 Aligned_cols=209 Identities=18% Similarity=0.177 Sum_probs=175.5
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHc
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIE 129 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~ 129 (320)
.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++. ..+..+.+|++|. +++.++++.+.++
T Consensus 2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~g 76 (235)
T 3l6e_A 2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG-----NAVIGIVADLAHHEDVDVAFAAAVEWGG 76 (235)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-----GGEEEEECCTTSHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-----CCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence 47999999999999999999999999999999999999888877772 2588999999984 3566677777777
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhH
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA 209 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~ 209 (320)
+ +|+||||||.... .++.+.+.++|++++++|+.|++++++.++|.|++++ ++||++||.++.. +.++...|+
T Consensus 77 ~--id~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~--~~~~~~~Y~ 149 (235)
T 3l6e_A 77 L--PELVLHCAGTGEF--GPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQV--GKANESLYC 149 (235)
T ss_dssp S--CSEEEEECCCC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCS--SCSSHHHHH
T ss_pred C--CcEEEECCCCCCC--CChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcC--CCCCCcHHH
Confidence 5 5599999998654 6788999999999999999999999999999997654 6999999999998 778899999
Q ss_pred HHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc--cCCCCCCCHHHHHHHHHHHhCCC
Q 020854 210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK--RSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 210 asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~--~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
+||+|+++|+++|+.|++++||+||+|+||+++|+|.... .+.....+||++|+.++..+..+
T Consensus 150 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~pedvA~~v~~l~~~~ 214 (235)
T 3l6e_A 150 ASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDHVDPSGFMTPEDAAAYMLDALEAR 214 (235)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC-----------CBCHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCCCCCcCCCCHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999997642 22335689999999999998755
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-39 Score=289.41 Aligned_cols=214 Identities=21% Similarity=0.279 Sum_probs=183.5
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
..+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++ +..+..+.+|++|. +++.++++.
T Consensus 6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~ 80 (271)
T 3tzq_B 6 TAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV-----GRGAVHHVVDLTNEVSVRALIDFTI 80 (271)
T ss_dssp -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH-----CTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCCeEEEECCCCCHHHHHHHHHHHH
Confidence 34577999999999999999999999999999999999999888877766 45678889999984 356677777
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCc
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
+.+++ +|+||||||.......++.+.+.++|++++++|+.|++++++.++|+|++++.|+||++||.++.. +.++.
T Consensus 81 ~~~g~--id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~--~~~~~ 156 (271)
T 3tzq_B 81 DTFGR--LDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHA--AYDMS 156 (271)
T ss_dssp HHHSC--CCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS--BCSSC
T ss_pred HHcCC--CCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcC--CCCCC
Confidence 77876 559999999874334567899999999999999999999999999999998899999999999988 67889
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc------------ccCCCCCCCHHHHHHHHHHHhC
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI------------KRSSFFVPSTDVYARAAMRWIG 270 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~------------~~~~~~~~~~~~~a~~i~~~l~ 270 (320)
..|++||+|+++|+++++.|++++||+||+|+||+|+|++... ..+.....+|+++|+.++..+.
T Consensus 157 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s 233 (271)
T 3tzq_B 157 TAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLAGRIGEPHEIAELVCFLAS 233 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999998762 1122234577777777776664
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-40 Score=287.98 Aligned_cols=217 Identities=24% Similarity=0.282 Sum_probs=183.2
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCC-ceEEEEEEeCCCC--cHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAK-TQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+++ .++.++++|++|. +++.++++.
T Consensus 3 ~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 82 (250)
T 3nyw_A 3 LEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIH 82 (250)
T ss_dssp --CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHH
Confidence 4567999999999999999999999999999999999999999999998876544 6788999999984 356666777
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCc
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
+.++ ++|+||||||+... .++ +.+.++|++++++|+.|++.+++.++|.|++++.|+||++||.++.. +.+..
T Consensus 83 ~~~g--~iD~lvnnAg~~~~--~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~ 155 (250)
T 3nyw_A 83 QKYG--AVDILVNAAAMFMD--GSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKY--GFADG 155 (250)
T ss_dssp HHHC--CEEEEEECCCCCCC--CCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC---------CCT
T ss_pred HhcC--CCCEEEECCCcCCC--CCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcC--CCCCC
Confidence 7777 47799999998764 455 77899999999999999999999999999988899999999999987 44558
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc---ccCCCCCCCHHHHHHHHHHHhCCC
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI---KRSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~---~~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
..|++||+|+.+|+++|+.|++++||+||+|+||+++|+|... ..+...+.+||++|+.++..+..+
T Consensus 156 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~p~dva~~v~~l~s~~ 225 (250)
T 3nyw_A 156 GIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAGTPFKDEEMIQPDDLLNTIRCLLNLS 225 (250)
T ss_dssp THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTTCCSCGGGSBCHHHHHHHHHHHHTSC
T ss_pred cchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcCCCcccccCCCHHHHHHHHHHHHcCC
Confidence 8999999999999999999999999999999999999999763 222334679999999999988765
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-39 Score=290.75 Aligned_cols=218 Identities=24% Similarity=0.263 Sum_probs=185.7
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcC-CceEEEEEEeCCCC--cHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYA-KTQIKSVVVDFSGD--LDEGVERI 124 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~~~~--~~~~~~~~ 124 (320)
+++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+. ..++.++++|++|. +++.++++
T Consensus 6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 85 (281)
T 3svt_A 6 QLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAV 85 (281)
T ss_dssp --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHH
T ss_pred ccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999999999999999877543 23789999999985 35666777
Q ss_pred HHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCC
Q 020854 125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL 204 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~ 204 (320)
.+.+++ +|+||||||.... ..++.+.+.++|++++++|+.|+++++++++|.|.+++.|+||++||.++.. +.++
T Consensus 86 ~~~~g~--id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~ 160 (281)
T 3svt_A 86 TAWHGR--LHGVVHCAGGSEN-IGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASN--THRW 160 (281)
T ss_dssp HHHHSC--CCEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHS--CCTT
T ss_pred HHHcCC--CCEEEECCCcCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcC--CCCC
Confidence 777776 5599999998443 3578899999999999999999999999999999998899999999999988 6788
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc-------------cCCCCCCCHHHHHHHHHHHhC
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK-------------RSSFFVPSTDVYARAAMRWIG 270 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~-------------~~~~~~~~~~~~a~~i~~~l~ 270 (320)
...|++||+|+++|+++++.|++++||+||+|+||+|+|+|.... .+.....+|+++|+.++..+.
T Consensus 161 ~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s 239 (281)
T 3svt_A 161 FGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLS 239 (281)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHHHHHHHHHHHHS
T ss_pred ChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999997521 122234567777777666554
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-39 Score=290.70 Aligned_cols=220 Identities=24% Similarity=0.279 Sum_probs=191.1
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
++||++||||||+|||+++|++|+++|++|++++|+.+++++..+++.+. +.++..+.+|++|. +++.++++.+.+
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ--GFDAHGVVCDVRHLDEMVRLADEAFRLL 106 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHhC
Confidence 67999999999999999999999999999999999999999999988765 45788999999985 355666667777
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccccCCCCCchh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
++ +|+||||||+... .++.+.+.+++++++++|+.|++++++.++|.|.+++ .|+||++||.++.. +.++.+.
T Consensus 107 g~--id~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~ 180 (301)
T 3tjr_A 107 GG--VDVVFSNAGIVVA--GPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLV--PNAGLGT 180 (301)
T ss_dssp SS--CSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS--CCTTBHH
T ss_pred CC--CCEEEECCCcCCC--CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC--CCCCchH
Confidence 75 5599999999764 6788999999999999999999999999999998776 79999999999998 7889999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc---------------------cCCCCCCCHHHHHHHHH
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK---------------------RSSFFVPSTDVYARAAM 266 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~---------------------~~~~~~~~~~~~a~~i~ 266 (320)
|++||+|+++|+++|+.|+++.||+|++|+||+|+|+|.... .......+||++|+.++
T Consensus 181 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~ 260 (301)
T 3tjr_A 181 YGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTA 260 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999986520 00112569999999999
Q ss_pred HHhCCCCc-ccCC
Q 020854 267 RWIGYEPC-CTPY 278 (320)
Q Consensus 267 ~~l~~~~~-~~~~ 278 (320)
..+..++. +.+.
T Consensus 261 ~~l~~~~~~i~~g 273 (301)
T 3tjr_A 261 DAILANRLYILPH 273 (301)
T ss_dssp HHHHHTCSEECCC
T ss_pred HHHhcCCeEEecC
Confidence 99988743 3343
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-40 Score=291.75 Aligned_cols=192 Identities=26% Similarity=0.393 Sum_probs=173.7
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
+.+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+. +.++..+.+|++|. +++.++++.
T Consensus 23 ~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~ 100 (270)
T 3ftp_A 23 DKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQA--GLEGRGAVLNVNDATAVDALVESTL 100 (270)
T ss_dssp CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH--TCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEEeCCCHHHHHHHHHHHH
Confidence 34578999999999999999999999999999999999999999988888765 45678889999984 356677777
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCc
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
+.+++ +|+||||||+... .++.+.+.++|++++++|+.|+++++++++|.|.+++.|+||++||.++.. +.++.
T Consensus 101 ~~~g~--iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~ 174 (270)
T 3ftp_A 101 KEFGA--LNVLVNNAGITQD--QLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSA--GNPGQ 174 (270)
T ss_dssp HHHSC--CCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH--CCTTB
T ss_pred HHcCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCC--CCCCc
Confidence 77776 5599999998764 668899999999999999999999999999999988899999999999998 77889
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
..|++||+|+++|+++|+.|++++||+||+|+||+|+|+|..
T Consensus 175 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~ 216 (270)
T 3ftp_A 175 VNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTK 216 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchh
Confidence 999999999999999999999999999999999999999865
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-39 Score=289.44 Aligned_cols=233 Identities=24% Similarity=0.305 Sum_probs=188.5
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCC----------------HHHHHHHHHHHHhhcCCceEEEEEEe
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN----------------PDKLKDVSDSIQAKYAKTQIKSVVVD 112 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~----------------~~~~~~~~~~l~~~~~~~~~~~~~~D 112 (320)
.+++||+++||||++|||+++|++|+++|++|++++|+ .+++++..+++... +.++..+++|
T Consensus 7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D 84 (286)
T 3uve_A 7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH--NRRIVTAEVD 84 (286)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT--TCCEEEEECC
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhc--CCceEEEEcC
Confidence 45779999999999999999999999999999999987 77788877777654 4578999999
Q ss_pred CCCC--cHHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEE
Q 020854 113 FSGD--LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIV 189 (320)
Q Consensus 113 ~~~~--~~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv 189 (320)
++|. +++.++++.+.+++ +|+||||||+... ..++.+.+.++|++++++|+.|+++++++++|+|.+++ .|+||
T Consensus 85 v~~~~~v~~~~~~~~~~~g~--id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv 161 (286)
T 3uve_A 85 VRDYDALKAAVDSGVEQLGR--LDIIVANAGIGNG-GDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSII 161 (286)
T ss_dssp TTCHHHHHHHHHHHHHHHSC--CCEEEECCCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEE
T ss_pred CCCHHHHHHHHHHHHHHhCC--CCEEEECCcccCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEE
Confidence 9984 35667777777775 5599999998764 23588899999999999999999999999999998765 79999
Q ss_pred EEcCccccccCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc------cCCCCCCCHHHHHH
Q 020854 190 NIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK------RSSFFVPSTDVYAR 263 (320)
Q Consensus 190 ~vsS~~~~~~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~------~~~~~~~~~~~~a~ 263 (320)
++||.++.. +.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|+|.... .+......+++...
T Consensus 162 ~isS~~~~~--~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (286)
T 3uve_A 162 LTSSVGGLK--AYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAP 239 (286)
T ss_dssp EECCGGGTS--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHH
T ss_pred EECchhhcc--CCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHH
Confidence 999999998 7888999999999999999999999999999999999999999997631 11112233444333
Q ss_pred H--HHHHhCCCCcccCCchHHHHHHHHh
Q 020854 264 A--AMRWIGYEPCCTPYWPHSFIWGVLS 289 (320)
Q Consensus 264 ~--i~~~l~~~~~~~~~~~~~~~~~l~~ 289 (320)
. ....++ ++...|.+....+.||++
T Consensus 240 ~~~~~~~~p-~r~~~p~dvA~~v~fL~s 266 (286)
T 3uve_A 240 ICQMFHTLP-IPWVEPIDISNAVLFFAS 266 (286)
T ss_dssp HHHTTCSSS-CSCBCHHHHHHHHHHHHS
T ss_pred HHHhhhccC-CCcCCHHHHHHHHHHHcC
Confidence 2 111222 355666677776666654
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-40 Score=290.50 Aligned_cols=226 Identities=26% Similarity=0.368 Sum_probs=179.0
Q ss_pred CCcccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHH
Q 020854 45 PAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVE 122 (320)
Q Consensus 45 ~~~~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~ 122 (320)
|.+.++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++..+.+|++|. +++.++
T Consensus 19 ~~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~ 93 (266)
T 3grp_A 19 PGSMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL-----GKDVFVFSANLSDRKSIKQLAE 93 (266)
T ss_dssp --CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CSSEEEEECCTTSHHHHHHHHH
T ss_pred CcchhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEeecCCHHHHHHHHH
Confidence 33445688999999999999999999999999999999999999888876655 45789999999985 356667
Q ss_pred HHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCC
Q 020854 123 RIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD 202 (320)
Q Consensus 123 ~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~ 202 (320)
++.+.+++ +|+||||||.... .++.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||.++.. +.
T Consensus 94 ~~~~~~g~--iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~--~~ 167 (266)
T 3grp_A 94 VAEREMEG--IDILVNNAGITRD--GLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVV--GN 167 (266)
T ss_dssp HHHHHHTS--CCEEEECCCCC-------CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC--------
T ss_pred HHHHHcCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcC--CC
Confidence 77777775 5599999998764 668889999999999999999999999999999988899999999999988 77
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHH
Q 020854 203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHS 282 (320)
Q Consensus 203 ~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~ 282 (320)
++...|++||+|+++|+++++.|++++||+||+|+||+++|+|.... +++..+.+....+.++...|++...
T Consensus 168 ~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~--------~~~~~~~~~~~~p~~r~~~~edvA~ 239 (266)
T 3grp_A 168 PGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKL--------NEKQKEAIMAMIPMKRMGIGEEIAF 239 (266)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTC--------CHHHHHHHHTTCTTCSCBCHHHHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhcc--------CHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 88999999999999999999999999999999999999999987531 1233344444445556666666666
Q ss_pred HHHHHHh
Q 020854 283 FIWGVLS 289 (320)
Q Consensus 283 ~~~~l~~ 289 (320)
.+.++++
T Consensus 240 ~v~~L~s 246 (266)
T 3grp_A 240 ATVYLAS 246 (266)
T ss_dssp HHHHHHS
T ss_pred HHHHHhC
Confidence 6665554
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-39 Score=285.68 Aligned_cols=212 Identities=26% Similarity=0.322 Sum_probs=179.6
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+. +.++..+.+|++|. +++.++++.+.+
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 79 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA--GGTALAQVLDVTDRHSVAAFAQAAVDTW 79 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 35899999999999999999999999999999999999999999988765 45788999999985 356667777777
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
++ +|+||||||+... .++.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||.++.. +.++.+.|
T Consensus 80 g~--iD~lVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~--~~~~~~~Y 153 (264)
T 3tfo_A 80 GR--IDVLVNNAGVMPL--SPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALS--VVPTAAVY 153 (264)
T ss_dssp SC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC--CCTTCHHH
T ss_pred CC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcc--cCCCChhH
Confidence 76 5599999998754 678899999999999999999999999999999988899999999999998 78889999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccC----------CCCCCCHHHHHHHHHHHhCCC
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRS----------SFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~----------~~~~~~~~~~a~~i~~~l~~~ 272 (320)
++||+|+.+|+++|+.|+ + ||+||+|+||+|+|+|...... .....+||++|+.++..+..+
T Consensus 154 ~asKaal~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~ 225 (264)
T 3tfo_A 154 CATKFAVRAISDGLRQES-T-NIRVTCVNPGVVESELAGTITHEETMAAMDTYRAIALQPADIARAVRQVIEAP 225 (264)
T ss_dssp HHHHHHHHHHHHHHHHHC-S-SEEEEEEEECCC-----------------------CCCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHhC-C-CCEEEEEecCCCcCcccccccchhHHHHHHhhhccCCCHHHHHHHHHHHhcCC
Confidence 999999999999999998 5 9999999999999999753110 111368999999999988765
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-39 Score=289.83 Aligned_cols=231 Identities=24% Similarity=0.296 Sum_probs=195.1
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+. +.++..+.+|++|. +++.++++.+.+
T Consensus 22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (279)
T 3sju_A 22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA--GHDVDGSSCDVTSTDEVHAAVAAAVERF 99 (279)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 56999999999999999999999999999999999999999999988765 45788999999985 356677777777
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhH--hhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLP--GMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~--~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
++ +|+||||||.... .++.+.+.++|++++++|+.|++++++.++| .|.+++.|+||++||.++.. +.++..
T Consensus 100 g~--id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~--~~~~~~ 173 (279)
T 3sju_A 100 GP--IGILVNSAGRNGG--GETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQ--GVMYAA 173 (279)
T ss_dssp CS--CCEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTS--CCTTCH
T ss_pred CC--CcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhcc--CCCCCh
Confidence 75 5599999998764 6788999999999999999999999999999 68877889999999999988 778899
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc---cCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHH
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK---RSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSF 283 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~---~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~ 283 (320)
.|++||+|+++|+++|+.|++++||+||+|+||+|+|+|.... ........+++..+.+....+.++...|++.+.+
T Consensus 174 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~ 253 (279)
T 3sju_A 174 PYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGL 253 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence 9999999999999999999999999999999999999987531 1111122456666666666677777888888887
Q ss_pred HHHHHh
Q 020854 284 IWGVLS 289 (320)
Q Consensus 284 ~~~l~~ 289 (320)
+.++++
T Consensus 254 v~~L~s 259 (279)
T 3sju_A 254 VGYLVT 259 (279)
T ss_dssp HHHHTS
T ss_pred HHHHhC
Confidence 777654
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-39 Score=288.98 Aligned_cols=188 Identities=26% Similarity=0.331 Sum_probs=170.0
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
.++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++..+++|++|. +++.++++.
T Consensus 22 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~ 96 (277)
T 4dqx_A 22 SMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI-----GSKAFGVRVDVSSAKDAESMVEKTT 96 (277)
T ss_dssp CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHH
Confidence 45677999999999999999999999999999999999999888877764 45688999999984 356667777
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCc
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
+.+++ +|+||||||.... .++.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.++.. +.++.
T Consensus 97 ~~~g~--iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~ 170 (277)
T 4dqx_A 97 AKWGR--VDVLVNNAGFGTT--GNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATS--AIADR 170 (277)
T ss_dssp HHHSC--CCEEEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTS--CCTTB
T ss_pred HHcCC--CCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCc--CCCCC
Confidence 77776 5599999998764 678899999999999999999999999999999988889999999999988 77889
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCC
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMA 246 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~ 246 (320)
..|++||+|+++|+++|+.|++++||+||+|+||+|+|+|.
T Consensus 171 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~ 211 (277)
T 4dqx_A 171 TAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYF 211 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchh
Confidence 99999999999999999999999999999999999999984
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-39 Score=288.81 Aligned_cols=225 Identities=27% Similarity=0.314 Sum_probs=191.2
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHH---
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERI--- 124 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~--- 124 (320)
.++++||++|||||++|||+++|++|+++|++|++++|+ ++.++..+++.+. +.++..+.+|++|. +.++++
T Consensus 26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~--~~~~~~~~~Dv~d~--~~v~~~~~~ 100 (273)
T 3uf0_A 26 PFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADG--GGSAEAVVADLADL--EGAANVAEE 100 (273)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTT--TCEEEEEECCTTCH--HHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhc--CCcEEEEEecCCCH--HHHHHHHHH
Confidence 346789999999999999999999999999999999976 4566677777654 46788999999985 333333
Q ss_pred HHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCC
Q 020854 125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL 204 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~ 204 (320)
.+.++ ++|+||||||+... .++.+.+.++|++++++|+.|++++++.++|.|.+++.|+||++||.++.. +.++
T Consensus 101 ~~~~g--~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~--~~~~ 174 (273)
T 3uf0_A 101 LAATR--RVDVLVNNAGIIAR--APAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQ--GGRN 174 (273)
T ss_dssp HHHHS--CCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CCSS
T ss_pred HHhcC--CCcEEEECCCCCCC--CCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcC--CCCC
Confidence 33444 46699999998764 678899999999999999999999999999999988899999999999998 7788
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHH
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFI 284 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~ 284 (320)
...|++||+|+++|+++++.|++++||+||+|+||+|+|++.... ...++..+.+....+.++...|++....+
T Consensus 175 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~------~~~~~~~~~~~~~~p~~r~~~pedva~~v 248 (273)
T 3uf0_A 175 VAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAAL------RADDERAAEITARIPAGRWATPEDMVGPA 248 (273)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH------HTSHHHHHHHHHHSTTSSCBCGGGGHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhc------ccCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 999999999999999999999999999999999999999987641 12344556667777888889999999988
Q ss_pred HHHHh
Q 020854 285 WGVLS 289 (320)
Q Consensus 285 ~~l~~ 289 (320)
.++++
T Consensus 249 ~~L~s 253 (273)
T 3uf0_A 249 VFLAS 253 (273)
T ss_dssp HHHHS
T ss_pred HHHhC
Confidence 88775
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-39 Score=288.23 Aligned_cols=232 Identities=23% Similarity=0.248 Sum_probs=193.9
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
.++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+. +.++..+++|++|. +++.++++.+.
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT--GRRALSVGTDITDDAQVAHLVDETMKA 85 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 367999999999999999999999999999999999999999999988765 45788999999985 35666777777
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
+++ +|+||||||.... ..++.+.+.++|++++++|+.|++++++.++|.|.+++ |+||++||.++.. +.++...
T Consensus 86 ~g~--id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~--~~~~~~~ 159 (264)
T 3ucx_A 86 YGR--VDVVINNAFRVPS-MKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRH--SQAKYGA 159 (264)
T ss_dssp TSC--CSEEEECCCSCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGC--CCTTCHH
T ss_pred cCC--CcEEEECCCCCCC-CCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhcc--CCCccHH
Confidence 775 5599999998643 36788999999999999999999999999999998764 9999999999988 7788999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcccc---CCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHH
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKR---SSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFI 284 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~---~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~ 284 (320)
|++||+|+++|+++++.|++++||+||+|+||+|+|++..... .......+++..+.+....+.++...|++....+
T Consensus 160 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v 239 (264)
T 3ucx_A 160 YKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAI 239 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHHHHH
Confidence 9999999999999999999999999999999999999865310 0011224455556656666666777777777777
Q ss_pred HHHHh
Q 020854 285 WGVLS 289 (320)
Q Consensus 285 ~~l~~ 289 (320)
.++++
T Consensus 240 ~~L~s 244 (264)
T 3ucx_A 240 LFMAS 244 (264)
T ss_dssp HHHHS
T ss_pred HHHcC
Confidence 77654
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-39 Score=286.23 Aligned_cols=217 Identities=23% Similarity=0.273 Sum_probs=183.4
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
+++.||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+. +.++..+++|++|. +++.++++.+
T Consensus 24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~ 101 (283)
T 3v8b_A 24 MNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA--GGQAIALEADVSDELQMRNAVRDLVL 101 (283)
T ss_dssp ---CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 4567999999999999999999999999999999999999999998888654 45788999999985 3567777777
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
.+++ +|+||||||+... ..++.+.+.++|++++++|+.|++++++.++|+|++++.|+||++||.++....+.++..
T Consensus 102 ~~g~--iD~lVnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~ 178 (283)
T 3v8b_A 102 KFGH--LDIVVANAGINGV-WAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGAT 178 (283)
T ss_dssp HHSC--CCEEEECCCCCCC-BCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCH
T ss_pred HhCC--CCEEEECCCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCch
Confidence 7776 5599999998643 357889999999999999999999999999999998889999999999987633457789
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcccc------------------CC--CCCCCHHHHHHHHH
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKR------------------SS--FFVPSTDVYARAAM 266 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~------------------~~--~~~~~~~~~a~~i~ 266 (320)
.|++||+|+++|+++++.|++++||+||+|+||+|+|+|..... +. ....+||++|+.++
T Consensus 179 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~ 258 (283)
T 3v8b_A 179 AYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIR 258 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999975310 00 22346777777777
Q ss_pred HHhC
Q 020854 267 RWIG 270 (320)
Q Consensus 267 ~~l~ 270 (320)
..+.
T Consensus 259 fL~s 262 (283)
T 3v8b_A 259 FLVS 262 (283)
T ss_dssp HHTS
T ss_pred HHcC
Confidence 6654
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-39 Score=287.04 Aligned_cols=215 Identities=24% Similarity=0.293 Sum_probs=182.3
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeC-CHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERI 124 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~ 124 (320)
.++++||++|||||++|||+++|++|+++|++|++++| +.+.+++..+++.+. +.++..+.+|++|. +++.++++
T Consensus 23 ~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~v~~~~~~~ 100 (269)
T 4dmm_A 23 ALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA--GGEAFAVKADVSQESEVEALFAAV 100 (269)
T ss_dssp -CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHH
Confidence 45678999999999999999999999999999999998 677788888887665 45788999999984 35667777
Q ss_pred HHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCC
Q 020854 125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL 204 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~ 204 (320)
.+.+++ +|+||||||.... .++.+.+.++|++++++|+.|++++++.++|.|.+++.|+||++||.++.. +.++
T Consensus 101 ~~~~g~--id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~ 174 (269)
T 4dmm_A 101 IERWGR--LDVLVNNAGITRD--TLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEM--GNPG 174 (269)
T ss_dssp HHHHSC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHH--CCTT
T ss_pred HHHcCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcC--CCCC
Confidence 777775 5599999998764 668899999999999999999999999999999988899999999999988 7788
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc--------ccCCCCCCCHHHHHHHHHHHhC
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI--------KRSSFFVPSTDVYARAAMRWIG 270 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~--------~~~~~~~~~~~~~a~~i~~~l~ 270 (320)
...|++||+|+++|+++|+.|++++||+||+|+||+|+|+|... ..+.....+|+++|+.++..+.
T Consensus 175 ~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s 248 (269)
T 4dmm_A 175 QANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAAEKLLEVIPLGRYGEAAEVAGVVRFLAA 248 (269)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHHHHHGGGCTTSSCBCHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccHHHHHhcCCCCCCCCHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999763 1122223455555555554443
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-39 Score=285.29 Aligned_cols=214 Identities=24% Similarity=0.355 Sum_probs=183.9
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeC-------------CHHHHHHHHHHHHhhcCCceEEEEEEeCCCC
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-------------NPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r-------------~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~ 116 (320)
+++||++|||||++|||+++|++|+++|++|++++| +.+++++..+++... +.++..+.+|++|.
T Consensus 8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~ 85 (277)
T 3tsc_A 8 KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA--NRRIVAAVVDTRDF 85 (277)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTCH
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc--CCeEEEEECCCCCH
Confidence 577999999999999999999999999999999998 677788887777654 45789999999984
Q ss_pred --cHHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcC
Q 020854 117 --LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGS 193 (320)
Q Consensus 117 --~~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS 193 (320)
+++.++++.+.+++ +|+||||||+... .++.+.+.++|++++++|+.|++++++.++|.|.+++ .|+||++||
T Consensus 86 ~~v~~~~~~~~~~~g~--id~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS 161 (277)
T 3tsc_A 86 DRLRKVVDDGVAALGR--LDIIVANAGVAAP--QAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISS 161 (277)
T ss_dssp HHHHHHHHHHHHHHSC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred HHHHHHHHHHHHHcCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEcc
Confidence 35666777777776 5599999998765 6788999999999999999999999999999998765 799999999
Q ss_pred ccccccCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc---------------------cCC
Q 020854 194 GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK---------------------RSS 252 (320)
Q Consensus 194 ~~~~~~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~---------------------~~~ 252 (320)
.++.. +.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|+|.... ..+
T Consensus 162 ~~~~~--~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 239 (277)
T 3tsc_A 162 AAGMK--MQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLP 239 (277)
T ss_dssp GGGTS--CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSSS
T ss_pred HhhCC--CCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhccC
Confidence 99988 7788999999999999999999999999999999999999999986420 001
Q ss_pred CCCCCHHHHHHHHHHHhCC
Q 020854 253 FFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 253 ~~~~~~~~~a~~i~~~l~~ 271 (320)
....+||++|+.++..+..
T Consensus 240 ~r~~~pedvA~~v~~L~s~ 258 (277)
T 3tsc_A 240 DWVAEPEDIADTVCWLASD 258 (277)
T ss_dssp CSCBCHHHHHHHHHHHHSG
T ss_pred CCCCCHHHHHHHHHHHhCc
Confidence 1345788888887776653
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=286.51 Aligned_cols=186 Identities=27% Similarity=0.374 Sum_probs=168.8
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++..+++|++|. +++.++++.+.+
T Consensus 4 l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 78 (247)
T 3rwb_A 4 LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI-----GKKARAIAADISDPGSVKALFAEIQALT 78 (247)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 56999999999999999999999999999999999999988877776 45688999999984 356677777777
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccccCCCCCchh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
++ +|+||||||.... .++.+.+.++|++++++|+.|++++++.++|+|++++ .|+||++||.++.. +.++.+.
T Consensus 79 g~--id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~ 152 (247)
T 3rwb_A 79 GG--IDILVNNASIVPF--VAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFA--GTPNMAA 152 (247)
T ss_dssp SC--CSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH--TCTTCHH
T ss_pred CC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhcc--CCCCchh
Confidence 76 5599999998754 6788999999999999999999999999999998876 79999999999988 7788999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
|++||+|+++|+++++.|++++||+||+|+||+|+|++..
T Consensus 153 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~ 192 (247)
T 3rwb_A 153 YVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVK 192 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCcccc
Confidence 9999999999999999999999999999999999999865
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=285.14 Aligned_cols=191 Identities=27% Similarity=0.379 Sum_probs=171.3
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCC------------HHHHHHHHHHHHhhcCCceEEEEEEeCCCC
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN------------PDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~ 116 (320)
.+++||++|||||++|||+++|++|+++|++|++++|+ .+++++..+++... +.++..+++|++|.
T Consensus 6 ~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~ 83 (281)
T 3s55_A 6 ADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT--GRRCISAKVDVKDR 83 (281)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTCH
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhc--CCeEEEEeCCCCCH
Confidence 35679999999999999999999999999999999997 66677777777654 45789999999984
Q ss_pred --cHHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCc
Q 020854 117 --LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSG 194 (320)
Q Consensus 117 --~~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~ 194 (320)
+++.++++.+.+++ +|+||||||+... .++.+.+.++|++++++|+.|+++++++++|+|.+++.|+||++||.
T Consensus 84 ~~v~~~~~~~~~~~g~--id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~ 159 (281)
T 3s55_A 84 AALESFVAEAEDTLGG--IDIAITNAGISTI--ALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSM 159 (281)
T ss_dssp HHHHHHHHHHHHHHTC--CCEEEECCCCCCC--CCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred HHHHHHHHHHHHhcCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCh
Confidence 35667777777775 5599999998764 67889999999999999999999999999999998889999999999
Q ss_pred cccccCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 195 AAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 195 ~~~~~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
++.. +.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|+|..
T Consensus 160 ~~~~--~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~ 210 (281)
T 3s55_A 160 LGHS--ANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTH 210 (281)
T ss_dssp GGGS--CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTS
T ss_pred hhcC--CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCcccc
Confidence 9988 77889999999999999999999999999999999999999999975
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-39 Score=283.27 Aligned_cols=222 Identities=25% Similarity=0.345 Sum_probs=184.8
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeC-CHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+.+|+++||||++|||+++|++|+++|++|+++++ +.+++++..+++.+. +.++..+++|++|. +++.++++.+.
T Consensus 2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 79 (246)
T 3osu_A 2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK--GVDSFAIQANVADADEVKAMIKEVVSQ 79 (246)
T ss_dssp CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 35899999999999999999999999999999887 567788888888765 45788999999984 35667777777
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
+++ +|+||||||.... .++.+.+.++|++++++|+.|++++++.++|+|++++.|+||++||.++.. +.++...
T Consensus 80 ~g~--id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~ 153 (246)
T 3osu_A 80 FGS--LDVLVNNAGITRD--NLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAV--GNPGQAN 153 (246)
T ss_dssp HSC--CCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH--CCTTCHH
T ss_pred cCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcC--CCCCChH
Confidence 775 5599999998764 678899999999999999999999999999999988899999999999988 7788999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHH
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGV 287 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l 287 (320)
|++||+|+++|+++++.|++++||+||+|+||+++|++.... +++..+.+....+.++...|++....+.++
T Consensus 154 Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--------~~~~~~~~~~~~p~~r~~~~~dva~~v~~l 225 (246)
T 3osu_A 154 YVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL--------SDELKEQMLTQIPLARFGQDTDIANTVAFL 225 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCS--------CHHHHHHHHTTCTTCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCccccc--------CHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999997631 123333444444444555555555555554
Q ss_pred H
Q 020854 288 L 288 (320)
Q Consensus 288 ~ 288 (320)
+
T Consensus 226 ~ 226 (246)
T 3osu_A 226 A 226 (246)
T ss_dssp T
T ss_pred h
Confidence 4
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-39 Score=292.33 Aligned_cols=226 Identities=23% Similarity=0.268 Sum_probs=189.2
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+ ..++..+.+|++|. +++.++++.+
T Consensus 37 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~ 115 (293)
T 3rih_A 37 FDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELG-AGNVIGVRLDVSDPGSCADAARTVVD 115 (293)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSS-SSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhC-CCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999888886653 35788999999985 3566777777
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccc-ccCCCCCc
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAI-VIPSDPLY 205 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~-~~~~~~~~ 205 (320)
.+++ +|+||||||.... .++.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||.++. . +.++.
T Consensus 116 ~~g~--iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~--~~~~~ 189 (293)
T 3rih_A 116 AFGA--LDVVCANAGIFPE--ARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVT--GYPGW 189 (293)
T ss_dssp HHSC--CCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTB--BCTTC
T ss_pred HcCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccC--CCCCC
Confidence 7876 4599999998764 67889999999999999999999999999999998889999999999986 5 57889
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHH
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIW 285 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~ 285 (320)
..|++||+|+++|+++++.|++++||+||+|+||+|+|++.... .++..+.+...++.++...|.+...++.
T Consensus 190 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~--------~~~~~~~~~~~~p~~r~~~p~dvA~~v~ 261 (293)
T 3rih_A 190 SHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDM--------GEEYISGMARSIPMGMLGSPVDIGHLAA 261 (293)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHT--------CHHHHHHHHTTSTTSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhc--------cHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999986531 1233334444444455555666666555
Q ss_pred HHHh
Q 020854 286 GVLS 289 (320)
Q Consensus 286 ~l~~ 289 (320)
|+++
T Consensus 262 fL~s 265 (293)
T 3rih_A 262 FLAT 265 (293)
T ss_dssp HHHS
T ss_pred HHhC
Confidence 5543
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-39 Score=290.85 Aligned_cols=218 Identities=24% Similarity=0.344 Sum_probs=186.2
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCC---eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL---NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERI 124 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~---~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~ 124 (320)
+++||++|||||++|||+++|++|+++|+ +|++++|+.+++++..+++.+.+++.++..+.+|++|. +++.++++
T Consensus 30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 109 (287)
T 3rku_A 30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENL 109 (287)
T ss_dssp HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTS
T ss_pred hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 36799999999999999999999999998 99999999999999999998877678899999999986 23444444
Q ss_pred HHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCC
Q 020854 125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL 204 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~ 204 (320)
.+.+++ +|+||||||...+ ..++.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||.++.. +.++
T Consensus 110 ~~~~g~--iD~lVnnAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~--~~~~ 184 (287)
T 3rku_A 110 PQEFKD--IDILVNNAGKALG-SDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRD--AYPT 184 (287)
T ss_dssp CGGGCS--CCEEEECCCCCCC-CCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS--CCTT
T ss_pred HHhcCC--CCEEEECCCcCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcC--CCCC
Confidence 445554 6699999998653 3568899999999999999999999999999999988899999999999988 7788
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc-----------cCCCCCCCHHHHHHHHHHHhCCC
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK-----------RSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~-----------~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
...|++||+|+++|+++|+.|++++||+||+|+||+|+|+|.... .......+||++|+.++..+..+
T Consensus 185 ~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~pedvA~~v~~l~s~~ 263 (287)
T 3rku_A 185 GSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTPLMADDVADLIVYATSRK 263 (287)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTTSCCEEHHHHHHHHHHHHTSC
T ss_pred CchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcccCCCCHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999999999999999985310 11112347788888877777654
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-39 Score=287.94 Aligned_cols=192 Identities=22% Similarity=0.252 Sum_probs=171.5
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+. +.++..+.+|++|. +++.++++.+.
T Consensus 5 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (280)
T 3tox_A 5 RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG--GGEAAALAGDVGDEALHEALVELAVRR 82 (280)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTT--TCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 366999999999999999999999999999999999999999988888653 45788999999984 35666777777
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
+++ +|+||||||+... ..++.+.+.++|++++++|+.|++++++.++|.|.+++.|+||++||.++... +.++...
T Consensus 83 ~g~--iD~lvnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-~~~~~~~ 158 (280)
T 3tox_A 83 FGG--LDTAFNNAGALGA-MGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTA-GFAGVAP 158 (280)
T ss_dssp HSC--CCEEEECCCCCCS-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTB-CCTTCHH
T ss_pred cCC--CCEEEECCCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcC-CCCCchh
Confidence 776 5599999998643 35688999999999999999999999999999999988999999999999721 5788999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
|++||+|+++|+++|+.|++++||+||+|+||+|+|++..
T Consensus 159 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~ 198 (280)
T 3tox_A 159 YAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANF 198 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSG
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhh
Confidence 9999999999999999999999999999999999999865
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-39 Score=285.71 Aligned_cols=189 Identities=26% Similarity=0.333 Sum_probs=168.9
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+. +.++..+.+|++|. +++.++++.+.+
T Consensus 4 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (257)
T 3imf_A 4 MKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF--PGQILTVQMDVRNTDDIQKMIEQIDEKF 81 (257)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS--TTCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 56999999999999999999999999999999999999999988888653 45788999999984 356667777777
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhh-cCCCcEEEEEcCccccccCCCCCchh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGML-KRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~-~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
++ +|+||||||.... .++.+.+.++|++++++|+.|+++++++++|+|. +++.|+||++||..+.. +.++...
T Consensus 82 g~--id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~ 155 (257)
T 3imf_A 82 GR--IDILINNAAGNFI--CPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWD--AGPGVIH 155 (257)
T ss_dssp SC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGS--CCTTCHH
T ss_pred CC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhcc--CCCCcHH
Confidence 75 5599999998754 6788999999999999999999999999999994 45589999999999988 7788999
Q ss_pred hHHHHHHHHHHHHHHHHHHc-cCCceEEEEeccceecCCCc
Q 020854 208 YAATKAYIDQFSRSLYVEYR-KSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~-~~gi~v~~v~PG~v~T~~~~ 247 (320)
|++||+|+++|+++|+.|++ ++||+||+|+||+|+|++..
T Consensus 156 Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~ 196 (257)
T 3imf_A 156 SAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGA 196 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC
T ss_pred HHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcch
Confidence 99999999999999999997 77999999999999999754
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-38 Score=284.08 Aligned_cols=213 Identities=25% Similarity=0.337 Sum_probs=183.4
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeC-------------CHHHHHHHHHHHHhhcCCceEEEEEEeCCCC
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-------------NPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r-------------~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~ 116 (320)
+++||++|||||++|||+++|++|+++|++|++++| +.+++++..+++.+. +.++..+.+|++|.
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~ 89 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ--GRKALTRVLDVRDD 89 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT--TCCEEEEECCTTCH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc--CCeEEEEEcCCCCH
Confidence 477999999999999999999999999999999998 678888888887665 45788999999985
Q ss_pred --cHHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcC
Q 020854 117 --LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGS 193 (320)
Q Consensus 117 --~~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS 193 (320)
+++.++++.+.+++ +|+||||||.... .++.+.+.++|++++++|+.|++++++.++|+|++++ .|+||++||
T Consensus 90 ~~v~~~~~~~~~~~g~--id~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS 165 (280)
T 3pgx_A 90 AALRELVADGMEQFGR--LDVVVANAGVLSW--GRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSS 165 (280)
T ss_dssp HHHHHHHHHHHHHHCC--CCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECC
T ss_pred HHHHHHHHHHHHHcCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcc
Confidence 35666777777775 5599999999764 6788999999999999999999999999999998765 799999999
Q ss_pred ccccccCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc--------------------cCCC
Q 020854 194 GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK--------------------RSSF 253 (320)
Q Consensus 194 ~~~~~~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~--------------------~~~~ 253 (320)
.++.. +.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++.... ..+.
T Consensus 166 ~~~~~--~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (280)
T 3pgx_A 166 SAGLK--ATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPN 243 (280)
T ss_dssp GGGTS--CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCCBTTBCS
T ss_pred hhhcc--CCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhhcccCCC
Confidence 99998 7788999999999999999999999999999999999999999987520 0011
Q ss_pred CCCCHHHHHHHHHHHhC
Q 020854 254 FVPSTDVYARAAMRWIG 270 (320)
Q Consensus 254 ~~~~~~~~a~~i~~~l~ 270 (320)
...+||++|+.++..+.
T Consensus 244 r~~~p~dvA~~v~~L~s 260 (280)
T 3pgx_A 244 GFMTADEVADVVAWLAG 260 (280)
T ss_dssp SCBCHHHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHHhC
Confidence 24577888887776664
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-39 Score=285.33 Aligned_cols=226 Identities=21% Similarity=0.285 Sum_probs=189.8
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+. +.++..+++|++|. +++.++++.+
T Consensus 28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~ 105 (276)
T 3r1i_A 28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV--GGKALPIRCDVTQPDQVRGMLDQMTG 105 (276)
T ss_dssp GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999999999999998888765 45688899999985 3566777777
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccccCCCCCc
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
.+++ +|+||||||.... .++.+.+.++|++++++|+.|++++++.++|.|.+++ +|+||++||.++......++.
T Consensus 106 ~~g~--iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~ 181 (276)
T 3r1i_A 106 ELGG--IDIAVCNAGIVSV--QAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQV 181 (276)
T ss_dssp HHSC--CSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCC
T ss_pred HcCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCc
Confidence 7876 5599999998764 6688999999999999999999999999999998776 499999999999763222467
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHH
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIW 285 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~ 285 (320)
+.|++||+|+++|+++++.|++++||+||+|+||+|+|++.... + +..+.....++.++...|++....+.
T Consensus 182 ~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~--------~-~~~~~~~~~~p~~r~~~pedvA~~v~ 252 (276)
T 3r1i_A 182 SHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPL--------A-DYHALWEPKIPLGRMGRPEELTGLYL 252 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGG--------G-GGHHHHGGGSTTSSCBCGGGSHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccc--------h-HHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 89999999999999999999999999999999999999997641 1 12233334445567777788877777
Q ss_pred HHHh
Q 020854 286 GVLS 289 (320)
Q Consensus 286 ~l~~ 289 (320)
++++
T Consensus 253 fL~s 256 (276)
T 3r1i_A 253 YLAS 256 (276)
T ss_dssp HHHS
T ss_pred HHcC
Confidence 7665
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=290.58 Aligned_cols=228 Identities=24% Similarity=0.251 Sum_probs=192.7
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCc--HHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDL--DEGVERIK 125 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~--~~~~~~~~ 125 (320)
.++++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+. +.++..+.+|++|.. ++.++++.
T Consensus 28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~ 105 (275)
T 4imr_A 28 IFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS--GGTAQELAGDLSEAGAGTDLIERAE 105 (275)
T ss_dssp HHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHT--TCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHH
Confidence 34688999999999999999999999999999999999999999888888764 456889999999862 44555554
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCc
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
+. + ++|+||||||.... .++.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||.++.. +.+..
T Consensus 106 ~~-g--~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~--~~~~~ 178 (275)
T 4imr_A 106 AI-A--PVDILVINASAQIN--ATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLR--PKSVV 178 (275)
T ss_dssp HH-S--CCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CCTTB
T ss_pred Hh-C--CCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC--CCCCc
Confidence 44 4 46699999998764 678899999999999999999999999999999988899999999999988 67778
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHh-CCCCcccCCchHHHH
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWI-GYEPCCTPYWPHSFI 284 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l-~~~~~~~~~~~~~~~ 284 (320)
..|++||+|+++|+++++.|++++||+||+|+||+|+|++...... ..++ ..+...... +.++...|++....+
T Consensus 179 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~----~~~~-~~~~~~~~~~p~~r~~~pedvA~~v 253 (275)
T 4imr_A 179 TAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRA----QDPE-GWDEYVRTLNWMGRAGRPEEMVGAA 253 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHH----HCHH-HHHHHHHHHSTTCSCBCGGGGHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccc----cChH-HHHHHHhhcCccCCCcCHHHHHHHH
Confidence 8899999999999999999999999999999999999998753110 1233 334444555 667888899999888
Q ss_pred HHHHh
Q 020854 285 WGVLS 289 (320)
Q Consensus 285 ~~l~~ 289 (320)
.++++
T Consensus 254 ~fL~s 258 (275)
T 4imr_A 254 LFLAS 258 (275)
T ss_dssp HHHHS
T ss_pred HHHcC
Confidence 88775
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-39 Score=283.07 Aligned_cols=225 Identities=20% Similarity=0.228 Sum_probs=186.3
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++..+++|++|. +++.++++.+.
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRVHALRSDIADLNEIAVLGAAAGQT 79 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHHH
Confidence 366999999999999999999999999999999999999988877766 45688999999985 35566666677
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
++ ++|+||||||.... .++.+.+.++|++++++|+.|++++++.++|+|++ .|+||++||.++.. +.++...
T Consensus 80 ~g--~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~--~~~~~~~ 151 (255)
T 4eso_A 80 LG--AIDLLHINAGVSEL--EPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE--GGSIVFTSSVADEG--GHPGMSV 151 (255)
T ss_dssp HS--SEEEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCGGGSS--BCTTBHH
T ss_pred hC--CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc--CCEEEEECChhhcC--CCCCchH
Confidence 76 47799999998764 67889999999999999999999999999999864 58999999999988 6788999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHH
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGV 287 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l 287 (320)
|++||+|+++|+++|+.|++++||+||+|+||+++|++..... ......++..+......+.++...|++....+.++
T Consensus 152 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L 229 (255)
T 4eso_A 152 YSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAG--ITEAERAEFKTLGDNITPMKRNGTADEVARAVLFL 229 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTT--SCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCccccccc--CChhhHHHHHHHHhccCCCCCCcCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999875310 00001122333344455666777788888777776
Q ss_pred Hh
Q 020854 288 LS 289 (320)
Q Consensus 288 ~~ 289 (320)
++
T Consensus 230 ~s 231 (255)
T 4eso_A 230 AF 231 (255)
T ss_dssp HH
T ss_pred cC
Confidence 54
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-39 Score=287.32 Aligned_cols=233 Identities=23% Similarity=0.330 Sum_probs=181.7
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeC-CHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
+++||++|||||++|||+++|++|+++|++|++++| +.+++++..+++.+.. +.++..+.+|++|. +++.++++.+
T Consensus 22 ~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~ 100 (281)
T 3v2h_A 22 SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLS-SGTVLHHPADMTKPSEIADMMAMVAD 100 (281)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTC-SSCEEEECCCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhcc-CCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence 467999999999999999999999999999999999 6777888888776543 45788999999985 3566667777
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
.+++ +|+||||||.... .++.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||.++.. +.++.+
T Consensus 101 ~~g~--iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~ 174 (281)
T 3v2h_A 101 RFGG--ADILVNNAGVQFV--EKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLV--ASPFKS 174 (281)
T ss_dssp HTSS--CSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CCTTCH
T ss_pred HCCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCccccc--CCCCch
Confidence 7775 5599999998764 678899999999999999999999999999999988899999999999988 778899
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCC---CCCCHHHHH-HHHHHHhCCCCcccCCchHH
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSF---FVPSTDVYA-RAAMRWIGYEPCCTPYWPHS 282 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~---~~~~~~~~a-~~i~~~l~~~~~~~~~~~~~ 282 (320)
.|++||+|+++|+++++.|++++||+||+|+||+|+|++.....+.. ....+++.. +.+....+.++...|++...
T Consensus 175 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~ 254 (281)
T 3v2h_A 175 AYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVAS 254 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHH
Confidence 99999999999999999999999999999999999999976421111 011222222 22333444456667777777
Q ss_pred HHHHHHh
Q 020854 283 FIWGVLS 289 (320)
Q Consensus 283 ~~~~l~~ 289 (320)
++.++++
T Consensus 255 ~v~~L~s 261 (281)
T 3v2h_A 255 LALYLAG 261 (281)
T ss_dssp HHHHHHS
T ss_pred HHHHHcC
Confidence 6666654
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-39 Score=288.42 Aligned_cols=227 Identities=16% Similarity=0.173 Sum_probs=188.8
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++..+++|++|. +++.++++.+.+
T Consensus 25 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 103 (277)
T 4fc7_A 25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGAT-GRRCLPLSMDVRAPPAVMAAVDQALKEF 103 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 679999999999999999999999999999999999999988888886544 45789999999985 356677777777
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
++ +|+||||||.... .++.+.+.++|++++++|+.|++++++.++|.|.+++.|+||++||.++.. +.++...|
T Consensus 104 g~--id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~Y 177 (277)
T 4fc7_A 104 GR--IDILINCAAGNFL--CPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNR--GQALQVHA 177 (277)
T ss_dssp SC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHH--TCTTCHHH
T ss_pred CC--CCEEEECCcCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCC--CCCCcHHH
Confidence 75 5599999998654 678899999999999999999999999999999888889999999999998 77889999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHHH
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVL 288 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l~ 288 (320)
++||+|+++|+++++.|++++||+||+|+||+|+|++..... ..+++..+......+.++...|++....+.+|+
T Consensus 178 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~-----~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~ 252 (277)
T 4fc7_A 178 GSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRL-----GGPQASLSTKVTASPLQRLGNKTEIAHSVLYLA 252 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHH-----SCCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhc-----cCCHHHHHHHhccCCCCCCcCHHHHHHHHHHHc
Confidence 999999999999999999999999999999999998643210 011233334444455556666666666666555
Q ss_pred h
Q 020854 289 S 289 (320)
Q Consensus 289 ~ 289 (320)
+
T Consensus 253 s 253 (277)
T 4fc7_A 253 S 253 (277)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=289.64 Aligned_cols=219 Identities=22% Similarity=0.277 Sum_probs=186.0
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
++.||+|||||||||||+++|++|+++|++|++++|+.+++++..+++...+.+..+..+.+|++|. +++.++.+.+.
T Consensus 5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 84 (319)
T 3ioy_A 5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR 84 (319)
T ss_dssp CCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence 3569999999999999999999999999999999999999999999998776556899999999985 24455556666
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC------CCcEEEEEcCccccccCC
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR------KKGAIVNIGSGAAIVIPS 201 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~------~~g~Iv~vsS~~~~~~~~ 201 (320)
++ ++|+||||||+... .++.+.+.+++++++++|+.|++++++.++|.|.++ +.|+||++||.++.. +
T Consensus 85 ~g--~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~--~ 158 (319)
T 3ioy_A 85 FG--PVSILCNNAGVNLF--QPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFL--A 158 (319)
T ss_dssp TC--CEEEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTC--C
T ss_pred CC--CCCEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEeccccccc--C
Confidence 65 47799999998764 678899999999999999999999999999999865 589999999999998 7
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCC-----------------------CCCCCH
Q 020854 202 DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSS-----------------------FFVPST 258 (320)
Q Consensus 202 ~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~-----------------------~~~~~~ 258 (320)
.++...|++||+|+.+|+++|+.|+++.||+|++|+||+|+|++....... ....+|
T Consensus 159 ~~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 238 (319)
T 3ioy_A 159 AGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEP 238 (319)
T ss_dssp CSSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSSBCH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCH
Confidence 788999999999999999999999999999999999999999997631000 012699
Q ss_pred HHHHHHHHHHhCCCCc
Q 020854 259 DVYARAAMRWIGYEPC 274 (320)
Q Consensus 259 ~~~a~~i~~~l~~~~~ 274 (320)
+++|+.++..+..++.
T Consensus 239 e~vA~~~~~al~~~~~ 254 (319)
T 3ioy_A 239 DVIGARVIEAMKANRL 254 (319)
T ss_dssp HHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHcCCC
Confidence 9999999999998854
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-39 Score=285.85 Aligned_cols=218 Identities=19% Similarity=0.264 Sum_probs=182.3
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHH-------HHHHHHHHHhhcCCceEEEEEEeCCCC--cHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK-------LKDVSDSIQAKYAKTQIKSVVVDFSGD--LDE 119 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~ 119 (320)
++++||+++||||++|||+++|++|+++|++|++++|+.++ +++..+++... +.++..+++|++|. +++
T Consensus 2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~ 79 (274)
T 3e03_A 2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA--GGQGLALKCDIREEDQVRA 79 (274)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHH--TSEEEEEECCTTCHHHHHH
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHH
Confidence 56779999999999999999999999999999999998753 56666666654 56789999999985 356
Q ss_pred HHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccccc
Q 020854 120 GVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI 199 (320)
Q Consensus 120 ~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~ 199 (320)
.++++.+.+++ +|+||||||+... .++.+.+.++|++++++|+.|++++++.++|+|++++.|+||++||.++..+
T Consensus 80 ~~~~~~~~~g~--iD~lvnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~ 155 (274)
T 3e03_A 80 AVAATVDTFGG--IDILVNNASAIWL--RGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNP 155 (274)
T ss_dssp HHHHHHHHHSC--CCEEEECCCCCCC--CCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCH
T ss_pred HHHHHHHHcCC--CCEEEECCCcccC--CCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCC
Confidence 66777777775 5599999998764 6788999999999999999999999999999999888999999999999872
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEecc-ceecCCCccc--cCCCCCCCHHHHHHHHHHHhCCC
Q 020854 200 PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPL-YVATKMASIK--RSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 200 ~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG-~v~T~~~~~~--~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
...++...|++||+|+.+|+++++.|++++||+||+|+|| +++|+|.... .+.....+||++|+.++..+...
T Consensus 156 ~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~ 231 (274)
T 3e03_A 156 AWWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINMLPGVDAAACRRPEIMADAAHAVLTRE 231 (274)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-------CCCGGGSBCTHHHHHHHHHHHTSC
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhcccccccccCCHHHHHHHHHHHhCcc
Confidence 1156788999999999999999999999999999999999 6999997532 12223578999999999988654
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=283.81 Aligned_cols=213 Identities=25% Similarity=0.272 Sum_probs=174.3
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
++.||++|||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++..+++|++|. +++.++++.+.
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 99 (272)
T 4dyv_A 25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI-----GDDALCVPTDVTDPDSVRALFTATVEK 99 (272)
T ss_dssp ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----TSCCEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCCeEEEEecCCCHHHHHHHHHHHHHH
Confidence 356999999999999999999999999999999999999988887776 35688899999984 35666777777
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC--CcEEEEEcCccccccCCCCCc
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK--KGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~--~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
+++ +|+||||||...+ ..++.+.+.++|++++++|+.|++++++.++|.|++++ .|+||++||.++.. +.++.
T Consensus 100 ~g~--iD~lVnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~--~~~~~ 174 (272)
T 4dyv_A 100 FGR--VDVLFNNAGTGAP-AIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATS--PRPYS 174 (272)
T ss_dssp HSC--CCEEEECCCCCCC-SSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTS--CCTTC
T ss_pred cCC--CCEEEECCCCCCC-CCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcC--CCCCc
Confidence 775 5599999998653 35688999999999999999999999999999998876 69999999999998 77889
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcccc----------CCCCCCCHHHHHHHHHHHhCCC
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKR----------SSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~----------~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
..|++||+|+++|+++++.|++++||+||+|+||+|+|+|..... +.....+||++|+.++..+..+
T Consensus 175 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fL~s~~ 251 (272)
T 4dyv_A 175 APYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGVPQADLSIKVEPVMDVAHVASAVVYMASLP 251 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC------------------------CHHHHHHHHHHHHHSC
T ss_pred hHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccchhhhhcccccCCCCHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999999999999999976311 1122456777777777766554
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-39 Score=287.07 Aligned_cols=193 Identities=26% Similarity=0.366 Sum_probs=159.7
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeC-CHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++.||++|||||++|||+++|++|+++|++|++++| +.+++++..+++.+. +.++.++++|++|. +++.++++.+
T Consensus 26 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~ 103 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL--GARVIFLRADLADLSSHQATVDAVVA 103 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHT--TCCEEEEECCTTSGGGHHHHHHHHHH
T ss_pred ccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 467999999999999999999999999999999995 788888888888765 45789999999984 4677788888
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC---CcEEEEEcCccccccCCCC
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK---KGAIVNIGSGAAIVIPSDP 203 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~---~g~Iv~vsS~~~~~~~~~~ 203 (320)
.+++ +|+||||||+......++.+.+.++|++++++|+.|++++++.++|.|.+++ .|+||++||.++.. +.+
T Consensus 104 ~~g~--iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~--~~~ 179 (280)
T 4da9_A 104 EFGR--IDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVM--TSP 179 (280)
T ss_dssp HHSC--CCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC---------
T ss_pred HcCC--CCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhcc--CCC
Confidence 8886 5599999998533246788999999999999999999999999999998765 78999999999988 778
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc
Q 020854 204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI 248 (320)
Q Consensus 204 ~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~ 248 (320)
+...|++||+|+++|+++|+.|++++||+||+|+||+|+|++...
T Consensus 180 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~ 224 (280)
T 4da9_A 180 ERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAA 224 (280)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhh
Confidence 899999999999999999999999999999999999999999763
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=281.31 Aligned_cols=215 Identities=25% Similarity=0.334 Sum_probs=181.3
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeC--CCC--cHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDF--SGD--LDEGVERI 124 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~--~~~--~~~~~~~~ 124 (320)
..++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+ ...+..+.+|+ +|. +++.++++
T Consensus 8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (252)
T 3f1l_A 8 DLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET-GRQPQWFILDLLTCTSENCQQLAQRI 86 (252)
T ss_dssp TTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCCceEEEEecccCCHHHHHHHHHHH
Confidence 34779999999999999999999999999999999999999999988887664 34677888999 653 24555666
Q ss_pred HHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCC
Q 020854 125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL 204 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~ 204 (320)
.+.+++ +|+||||||.... ..++.+.+.++|++++++|+.|++++++.++|+|++++.|+||++||.++.. +.++
T Consensus 87 ~~~~g~--id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~--~~~~ 161 (252)
T 3f1l_A 87 AVNYPR--LDGVLHNAGLLGD-VCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQ--GRAN 161 (252)
T ss_dssp HHHCSC--CSEEEECCCCCCC-CSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTS--CCTT
T ss_pred HHhCCC--CCEEEECCccCCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhcc--CCCC
Confidence 666665 5599999998643 3578899999999999999999999999999999988899999999999988 7788
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc---cCCCCCCCHHHHHHHHHHHhC
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK---RSSFFVPSTDVYARAAMRWIG 270 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~---~~~~~~~~~~~~a~~i~~~l~ 270 (320)
...|++||+|+++|+++|+.|+++. |+||+|+||+++|+|.... .+.....+|+++|+.++..+.
T Consensus 162 ~~~Y~asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~~~~~~~~~~~~p~dva~~~~~L~s 229 (252)
T 3f1l_A 162 WGAYAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAFPTEDPQKLKTPADIMPLYLWLMG 229 (252)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHHCTTCCGGGSBCTGGGHHHHHHHHS
T ss_pred CchhHHHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhhCCccchhccCCHHHHHHHHHHHcC
Confidence 9999999999999999999999887 9999999999999986531 112224567777777666554
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-38 Score=283.17 Aligned_cols=192 Identities=22% Similarity=0.335 Sum_probs=171.0
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCC------------HHHHHHHHHHHHhhcCCceEEEEEEeCCCC
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN------------PDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~ 116 (320)
.+++||++|||||++|||+++|++|+++|++|++++|+ .+++++..+++.+. +.++..+++|++|.
T Consensus 24 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~ 101 (299)
T 3t7c_A 24 GKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL--GRRIIASQVDVRDF 101 (299)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTCH
T ss_pred cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhc--CCceEEEECCCCCH
Confidence 35789999999999999999999999999999999987 77788888887665 45789999999984
Q ss_pred --cHHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcC
Q 020854 117 --LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGS 193 (320)
Q Consensus 117 --~~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS 193 (320)
+++.++++.+.+++ +|+||||||+... ..++.+.+.++|++++++|+.|++++++.++|.|.+++ .|+||++||
T Consensus 102 ~~v~~~~~~~~~~~g~--iD~lv~nAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS 178 (299)
T 3t7c_A 102 DAMQAAVDDGVTQLGR--LDIVLANAALASE-GTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSS 178 (299)
T ss_dssp HHHHHHHHHHHHHHSC--CCEEEECCCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECC
T ss_pred HHHHHHHHHHHHHhCC--CCEEEECCCCCCC-CCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECC
Confidence 35667777777776 5599999998764 23488999999999999999999999999999988765 799999999
Q ss_pred ccccccCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 194 GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 194 ~~~~~~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
.++.. +.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|+|..
T Consensus 179 ~~~~~--~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~ 230 (299)
T 3t7c_A 179 IGGLR--GAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLL 230 (299)
T ss_dssp GGGTS--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTS
T ss_pred hhhcc--CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCcccc
Confidence 99998 77889999999999999999999999999999999999999999975
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-38 Score=280.70 Aligned_cols=231 Identities=24% Similarity=0.291 Sum_probs=190.2
Q ss_pred CcccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHH
Q 020854 46 AKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVER 123 (320)
Q Consensus 46 ~~~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~ 123 (320)
++..+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++..+.+|++|. +++.+++
T Consensus 14 ~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~ 92 (267)
T 1vl8_A 14 KEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDVSNYEEVKKLLEA 92 (267)
T ss_dssp ---CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHHHHHHHHH
Confidence 34556789999999999999999999999999999999999999888888773332 44688899999984 3556667
Q ss_pred HHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcc-ccccCCC
Q 020854 124 IKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGA-AIVIPSD 202 (320)
Q Consensus 124 ~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~-~~~~~~~ 202 (320)
+.+.+++ +|+||||||.... .++.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||.+ +.. +.
T Consensus 93 ~~~~~g~--iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~--~~ 166 (267)
T 1vl8_A 93 VKEKFGK--LDTVVNAAGINRR--HPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV--TM 166 (267)
T ss_dssp HHHHHSC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC--CS
T ss_pred HHHHcCC--CCEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhcc--CC
Confidence 7777775 5599999998754 567889999999999999999999999999999888889999999998 776 66
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHH
Q 020854 203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHS 282 (320)
Q Consensus 203 ~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~ 282 (320)
++...|++||+++++|+++++.|++++||+||+|+||+++|+|..... ..+ +..+.+....+.++...|.+.+.
T Consensus 167 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-----~~~-~~~~~~~~~~p~~~~~~p~dvA~ 240 (267)
T 1vl8_A 167 PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVF-----SDP-EKLDYMLKRIPLGRTGVPEDLKG 240 (267)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHH-----TCH-HHHHHHHHTCTTSSCBCGGGGHH
T ss_pred CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccc-----cCh-HHHHHHHhhCCCCCCcCHHHHHH
Confidence 788999999999999999999999999999999999999999865311 012 23333444455567778888888
Q ss_pred HHHHHHh
Q 020854 283 FIWGVLS 289 (320)
Q Consensus 283 ~~~~l~~ 289 (320)
.+.++++
T Consensus 241 ~v~~l~s 247 (267)
T 1vl8_A 241 VAVFLAS 247 (267)
T ss_dssp HHHHHHS
T ss_pred HHHHHcC
Confidence 8777664
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=286.14 Aligned_cols=218 Identities=21% Similarity=0.266 Sum_probs=187.6
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHH-------HHHHHHHHHHhhcCCceEEEEEEeCCCC--cH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD-------KLKDVSDSIQAKYAKTQIKSVVVDFSGD--LD 118 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~-------~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~ 118 (320)
.++++||+++||||++|||+++|++|+++|++|++++|+.+ .+++..+++.+. +.++..+++|++|. ++
T Consensus 4 ~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~ 81 (285)
T 3sc4_A 4 SMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA--GGQALPIVGDIRDGDAVA 81 (285)
T ss_dssp --CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHH--TSEEEEEECCTTSHHHHH
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHH
Confidence 46678999999999999999999999999999999999976 467777777665 45789999999984 35
Q ss_pred HHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccc
Q 020854 119 EGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV 198 (320)
Q Consensus 119 ~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~ 198 (320)
+.++++.+.+++ +|+||||||+... .++.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||.++..
T Consensus 82 ~~~~~~~~~~g~--id~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~ 157 (285)
T 3sc4_A 82 AAVAKTVEQFGG--IDICVNNASAINL--GSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLE 157 (285)
T ss_dssp HHHHHHHHHHSC--CSEEEECCCCCCC--CCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCS
T ss_pred HHHHHHHHHcCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhcc
Confidence 667777777776 5599999998764 678899999999999999999999999999999988899999999999987
Q ss_pred cCCC-CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEecc-ceecCCCcc----ccCCCCCCCHHHHHHHHHHHhCCC
Q 020854 199 IPSD-PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPL-YVATKMASI----KRSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 199 ~~~~-~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG-~v~T~~~~~----~~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
+. ++...|++||+|+++|+++|+.|++++||+||+|+|| .++|++... ..+.....+||++|+.++..+...
T Consensus 158 --~~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~~~~~~~~~r~~~pedvA~~~~~l~s~~ 235 (285)
T 3sc4_A 158 --PKWLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLLGGDEAMARSRKPEVYADAAYVVLNKP 235 (285)
T ss_dssp --GGGSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHHHTSCCCCTTCBCTHHHHHHHHHHHTSC
T ss_pred --CCCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhhccccccccCCCCHHHHHHHHHHHhCCc
Confidence 43 6779999999999999999999999999999999999 799998663 222334678999999999888765
Q ss_pred C
Q 020854 273 P 273 (320)
Q Consensus 273 ~ 273 (320)
.
T Consensus 236 ~ 236 (285)
T 3sc4_A 236 S 236 (285)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-39 Score=285.55 Aligned_cols=188 Identities=29% Similarity=0.339 Sum_probs=169.9
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
.+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++..+++|++|. +++.++++.+
T Consensus 25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~ 99 (277)
T 3gvc_A 25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI-----GCGAAACRVDVSDEQQIIAMVDACVA 99 (277)
T ss_dssp --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----CSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCcceEEEecCCCHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999999999988877766 45688899999985 3566777777
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
.+++ +|+||||||.... .++.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.++.. +.++..
T Consensus 100 ~~g~--iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~--~~~~~~ 173 (277)
T 3gvc_A 100 AFGG--VDKLVANAGVVHL--ASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQV--AVGGTG 173 (277)
T ss_dssp HHSS--CCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS--CCTTBH
T ss_pred HcCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc--CCCCch
Confidence 7776 5599999999764 678899999999999999999999999999999998899999999999988 778899
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
.|++||+|+++|+++++.|++++||+||+|+||+|+|++..
T Consensus 174 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~ 214 (277)
T 3gvc_A 174 AYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQ 214 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHH
Confidence 99999999999999999999999999999999999999865
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=281.31 Aligned_cols=229 Identities=22% Similarity=0.258 Sum_probs=188.7
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++ +..+..+++|++|. +++.++++.+.
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~ 79 (259)
T 4e6p_A 5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI-----GPAAYAVQMDVTRQDSIDAAIAATVEH 79 (259)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence 366999999999999999999999999999999999999988887776 34578899999985 35566667777
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccccCCCCCch
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
+++ +|+||||||.... .++.+.+.++|++++++|+.|++++++.++|.|.+++ +|+||++||.++.. +.++..
T Consensus 80 ~g~--id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~ 153 (259)
T 4e6p_A 80 AGG--LDILVNNAALFDL--APIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRR--GEALVA 153 (259)
T ss_dssp SSS--CCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS--CCTTBH
T ss_pred cCC--CCEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhcc--CCCCCh
Confidence 775 5599999998764 6788999999999999999999999999999998765 79999999999988 778899
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcccc---CCCCCCCHHHHHHHHHHHhCCCCcccCCchHHH
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKR---SSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSF 283 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~---~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~ 283 (320)
.|++||+|+++|+++++.|++++||+||+|+||+++|++..... ........++..+.+....+.++...|++...+
T Consensus 154 ~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~ 233 (259)
T 4e6p_A 154 IYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGM 233 (259)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHH
Confidence 99999999999999999999999999999999999999865310 000000122333444555666677778877777
Q ss_pred HHHHHh
Q 020854 284 IWGVLS 289 (320)
Q Consensus 284 ~~~l~~ 289 (320)
+.++++
T Consensus 234 v~~L~s 239 (259)
T 4e6p_A 234 AIFLAS 239 (259)
T ss_dssp HHHTTS
T ss_pred HHHHhC
Confidence 776654
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-38 Score=275.65 Aligned_cols=188 Identities=30% Similarity=0.433 Sum_probs=169.0
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+. +.++..+.+|++|. +++.++++.+.+
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 82 (247)
T 2jah_A 5 LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA--GAKVHVLELDVADRQGVDAAVASTVEAL 82 (247)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 56999999999999999999999999999999999999998888888664 45688899999985 355666677777
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
++ +|+||||||.... .++.+.+.++|++++++|+.|++++++.++|.|.+++ |+||++||.++.. +.++...|
T Consensus 83 g~--id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~--~~~~~~~Y 155 (247)
T 2jah_A 83 GG--LDILVNNAGIMLL--GPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRV--NVRNAAVY 155 (247)
T ss_dssp SC--CSEEEECCCCCCC--CCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTC--CCTTCHHH
T ss_pred CC--CCEEEECCCCCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcC--CCCCCcHH
Confidence 75 5599999998754 6788999999999999999999999999999998776 9999999999988 67889999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
++||+|+.+|+++++.|++++||+||+|+||+++|+|..
T Consensus 156 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~ 194 (247)
T 2jah_A 156 QATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRG 194 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGG
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchh
Confidence 999999999999999999999999999999999999865
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-38 Score=277.66 Aligned_cols=216 Identities=26% Similarity=0.285 Sum_probs=182.0
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+. +..+..+.+|++|. +++.++++.+.
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~ 103 (262)
T 3rkr_A 26 SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA--GGEAESHACDLSHSDAIAAFATGVLAA 103 (262)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh--CCceeEEEecCCCHHHHHHHHHHHHHh
Confidence 367999999999999999999999999999999999999999998888765 45788999999985 35566777777
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
+++ +|+||||||.... ..++.+.+.+++++++++|+.|++++++.++|.|.+++.|+||++||.++.. +.++...
T Consensus 104 ~g~--id~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~ 178 (262)
T 3rkr_A 104 HGR--CDVLVNNAGVGWF-GGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKN--PVADGAA 178 (262)
T ss_dssp HSC--CSEEEECCCCCCC-SSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSC--CCTTCHH
T ss_pred cCC--CCEEEECCCccCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcC--CCCCCch
Confidence 775 5599999998433 3568889999999999999999999999999999988899999999999988 7788999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc---cCCCCCCCHHHHHHHHHHHhCCC
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK---RSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~---~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
|++||+|+++|+++++.|+++.||+|++|+||+++|+|.... .+.....+|+++|+.++..+...
T Consensus 179 Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~p~dvA~~v~~l~s~~ 246 (262)
T 3rkr_A 179 YTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSAKKSALGAIEPDDIADVVALLATQA 246 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------CCCHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccccccccccCCCHHHHHHHHHHHhcCc
Confidence 999999999999999999999999999999999999997642 22334679999999988887654
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-38 Score=278.05 Aligned_cols=191 Identities=26% Similarity=0.383 Sum_probs=171.2
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+. +.++..+.+|++|. +++.++++.+.
T Consensus 2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (247)
T 3lyl_A 2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK--GFKARGLVLNISDIESIQNFFAEIKAE 79 (247)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 467999999999999999999999999999999999999999988888765 45788999999985 24455555555
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
+++ +|+||||||.... .++.+.+.+++++++++|+.|++++++.++|.|.+++.|+||++||.++.. +.++...
T Consensus 80 ~~~--id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~ 153 (247)
T 3lyl_A 80 NLA--IDILVNNAGITRD--NLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSA--GNPGQTN 153 (247)
T ss_dssp TCC--CSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH--CCTTCHH
T ss_pred cCC--CCEEEECCCCCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcc--CCCCcHH
Confidence 554 5699999998764 667889999999999999999999999999999988889999999999988 7788999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI 248 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~ 248 (320)
|++||+|+++|+++++.|++++||+|++|+||+++|++...
T Consensus 154 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~ 194 (247)
T 3lyl_A 154 YCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDK 194 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchh
Confidence 99999999999999999999999999999999999999763
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-38 Score=280.22 Aligned_cols=232 Identities=21% Similarity=0.259 Sum_probs=185.4
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
.++++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+. +.++..+.+|++|. +++.++++.
T Consensus 16 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~ 93 (273)
T 1ae1_A 16 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVCDLLSRTERDKLMQTVA 93 (273)
T ss_dssp CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHH
Confidence 34577999999999999999999999999999999999999988888888664 45688899999985 245556666
Q ss_pred HHH-cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCC
Q 020854 126 EAI-EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL 204 (320)
Q Consensus 126 ~~~-~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~ 204 (320)
+.+ ++ +|+||||||.... .++.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.++.. +.++
T Consensus 94 ~~~~g~--id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~--~~~~ 167 (273)
T 1ae1_A 94 HVFDGK--LNILVNNAGVVIH--KEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFS--ALPS 167 (273)
T ss_dssp HHTTSC--CCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTS--CCTT
T ss_pred HHcCCC--CcEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcC--CCCC
Confidence 666 54 6699999998754 568889999999999999999999999999999887789999999999988 6788
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHH
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFI 284 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~ 284 (320)
...|++||+|+++|+++++.|++++||+||+|+||+++|++........ ...++..+.+....+.++...|++.+..+
T Consensus 168 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~~p~~r~~~p~dvA~~v 245 (273)
T 1ae1_A 168 VSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKN--PHQKEEIDNFIVKTPMGRAGKPQEVSALI 245 (273)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---------------CHHHHHHHHHHSTTCSCBCHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcc--cCcHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 9999999999999999999999999999999999999999965311100 01123334444555556777777777777
Q ss_pred HHHHh
Q 020854 285 WGVLS 289 (320)
Q Consensus 285 ~~l~~ 289 (320)
.++++
T Consensus 246 ~~l~s 250 (273)
T 1ae1_A 246 AFLCF 250 (273)
T ss_dssp HHHHS
T ss_pred HHHhC
Confidence 76654
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=283.29 Aligned_cols=244 Identities=26% Similarity=0.336 Sum_probs=198.6
Q ss_pred ccCCcccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHH
Q 020854 43 LRPAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEG 120 (320)
Q Consensus 43 ~~~~~~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~ 120 (320)
+.|.+..+++||+++||||++|||++++++|+++|++|++++|+.+++++..+++.+. +.++..+.+|++|. +++.
T Consensus 21 ~~~~~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~ 98 (272)
T 1yb1_A 21 HMPKRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVVDCSNREDIYSS 98 (272)
T ss_dssp ----CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHH
T ss_pred ccCCcccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc--CCeEEEEEeeCCCHHHHHHH
Confidence 3344456678999999999999999999999999999999999999988888888764 34688999999985 2455
Q ss_pred HHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC
Q 020854 121 VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP 200 (320)
Q Consensus 121 ~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~ 200 (320)
++++.+.+++ +|+||||||.... .++.+.+.+++++++++|+.|++++++.++|.|.+++.++||++||.++..
T Consensus 99 ~~~~~~~~g~--iD~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-- 172 (272)
T 1yb1_A 99 AKKVKAEIGD--VSILVNNAGVVYT--SDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV-- 172 (272)
T ss_dssp HHHHHHHTCC--CSEEEECCCCCCC--CCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CC--
T ss_pred HHHHHHHCCC--CcEEEECCCcCCC--cchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcC--
Confidence 5566666665 5599999998754 567788899999999999999999999999999988889999999999987
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHc---cCCceEEEEeccceecCCCccc-cCCCCCCCHHHHHHHHHHHhCCCCc-c
Q 020854 201 SDPLYSVYAATKAYIDQFSRSLYVEYR---KSGIDVQCQVPLYVATKMASIK-RSSFFVPSTDVYARAAMRWIGYEPC-C 275 (320)
Q Consensus 201 ~~~~~~~Y~asKaal~~~~~~l~~el~---~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~a~~i~~~l~~~~~-~ 275 (320)
+.++...|++||++++.++++++.|++ +.||+|++|+||+++|++.... .+.....+|+++|+.++..+..++. +
T Consensus 173 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~dva~~i~~~~~~~~~~~ 252 (272)
T 1yb1_A 173 SVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPSTSLGPTLEPEEVVNRLMHGILTEQKMI 252 (272)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTHHHHCCCCCHHHHHHHHHHHHHTTCSEE
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccccccccCCCCHHHHHHHHHHHHHcCCCEE
Confidence 667788999999999999999999997 6799999999999999996531 1122467999999999999988733 3
Q ss_pred cCCchHHHHHHHHhhchHH
Q 020854 276 TPYWPHSFIWGVLSILPEK 294 (320)
Q Consensus 276 ~~~~~~~~~~~l~~~~P~~ 294 (320)
...+...+..++.+++|.+
T Consensus 253 ~~~~~~~~~~~~~~~~P~~ 271 (272)
T 1yb1_A 253 FIPSSIAFLTTLERILPEG 271 (272)
T ss_dssp EECCCCCHHHHHHTTC---
T ss_pred ECCchHHHHHHHHHhCCCC
Confidence 3334455677888999964
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-39 Score=282.26 Aligned_cols=190 Identities=20% Similarity=0.199 Sum_probs=155.5
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++++||++|||||++|||+++|++|+++|++|++++|+.++.++..+++ +.++..+++|++|. +++.++++.+
T Consensus 3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~ 77 (257)
T 3tpc_A 3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL-----GAAVRFRNADVTNEADATAALAFAKQ 77 (257)
T ss_dssp -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-----------------CEEEECCTTCHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHH
Confidence 4567999999999999999999999999999999999998888777665 34678899999984 3566677777
Q ss_pred HHcCCCeEEEEEccCCCCCcc--ccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC------CCcEEEEEcCccccc
Q 020854 127 AIEGLDVGVLINNVGISYPYA--RFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR------KKGAIVNIGSGAAIV 198 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~------~~g~Iv~vsS~~~~~ 198 (320)
.+++ +|+||||||...... ....+.+.++|++++++|+.|+++++++++|+|.++ +.|+||++||.++..
T Consensus 78 ~~g~--id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~ 155 (257)
T 3tpc_A 78 EFGH--VHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFD 155 (257)
T ss_dssp HHSC--CCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH
T ss_pred HcCC--CCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhcc
Confidence 7776 559999999875411 112367899999999999999999999999999875 579999999999998
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 199 IPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 199 ~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++..
T Consensus 156 --~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~ 202 (257)
T 3tpc_A 156 --GQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMA 202 (257)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC---
T ss_pred --CCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhc
Confidence 77889999999999999999999999999999999999999999975
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-38 Score=279.21 Aligned_cols=230 Identities=19% Similarity=0.189 Sum_probs=193.3
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeC-CHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
+++||++|||||++|||+++|++|+++|++|+++++ +.+.+++..+++.+. +.++..+++|++|. +++.++++.+
T Consensus 15 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~ 92 (270)
T 3is3_A 15 RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL--GSDAIAIKADIRQVPEIVKLFDQAVA 92 (270)
T ss_dssp CCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 467999999999999999999999999999999775 566778888888765 45788999999984 3566777777
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcc-ccccCCCCCc
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGA-AIVIPSDPLY 205 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~-~~~~~~~~~~ 205 (320)
.+++ +|+||||||.... .++.+.+.++|++++++|+.|+++++++++|+|.+ .|+||++||.. +.. +.++.
T Consensus 93 ~~g~--id~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~--~~~~~ 164 (270)
T 3is3_A 93 HFGH--LDIAVSNSGVVSF--GHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE--GGRIVLTSSNTSKDF--SVPKH 164 (270)
T ss_dssp HHSC--CCEEECCCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCTTTTTC--CCTTC
T ss_pred HcCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCeEEEEeCchhccC--CCCCC
Confidence 7776 5599999998754 67889999999999999999999999999999954 68999999988 444 56889
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc----cCCCCCCCHHHHHHHHHHHhCCCCcccCCchH
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK----RSSFFVPSTDVYARAAMRWIGYEPCCTPYWPH 281 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~----~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~ 281 (320)
..|++||+|+++|+++|+.|++++||+||+|+||+++|+|.... .+......+++..+......+.++...|++..
T Consensus 165 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA 244 (270)
T 3is3_A 165 SLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVA 244 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999997621 11111245666777777777778888888888
Q ss_pred HHHHHHHh
Q 020854 282 SFIWGVLS 289 (320)
Q Consensus 282 ~~~~~l~~ 289 (320)
.++.++++
T Consensus 245 ~~v~~L~s 252 (270)
T 3is3_A 245 NVVGFLVS 252 (270)
T ss_dssp HHHHHHTS
T ss_pred HHHHHHcC
Confidence 88888765
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-38 Score=280.14 Aligned_cols=210 Identities=25% Similarity=0.286 Sum_probs=175.5
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
..+.+|++|||||++|||+++|++|+++|++|++++|+.+++++.. ...+..+.+|++|. +++.++++.+
T Consensus 12 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~Dv~d~~~v~~~~~~~~~ 83 (266)
T 3p19_A 12 RGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN--------LPNTLCAQVDVTDKYTFDTAITRAEK 83 (266)
T ss_dssp ---CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC--------CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh--------cCCceEEEecCCCHHHHHHHHHHHHH
Confidence 3467999999999999999999999999999999999988765431 33688899999985 3556666777
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
.++ ++|+||||||.... .++.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||.++.. +.++..
T Consensus 84 ~~g--~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~--~~~~~~ 157 (266)
T 3p19_A 84 IYG--PADAIVNNAGMMLL--GQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKK--TFPDHA 157 (266)
T ss_dssp HHC--SEEEEEECCCCCCC--CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS--CCTTCH
T ss_pred HCC--CCCEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCC--CCCCCc
Confidence 777 47799999998764 678899999999999999999999999999999988899999999999998 778899
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcccc-------------CCCCCCCHHHHHHHHHHHhCCC
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKR-------------SSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~-------------~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
.|++||+|+++|+++|+.|++++||+||+|+||+|+|++..... +.....+||++|+.++..+..+
T Consensus 158 ~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~av~~l~~~~ 236 (266)
T 3p19_A 158 AYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDMGGVLAADDVARAVLFAYQQP 236 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHHHTTCCBCHHHHHHHHHHHHHSC
T ss_pred hHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhcccccCCCCHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999976311 1122345666666665555444
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-38 Score=281.46 Aligned_cols=194 Identities=24% Similarity=0.296 Sum_probs=171.8
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
.+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+..++.++..+.+|++|. +++.++++.+
T Consensus 9 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 88 (267)
T 1iy8_A 9 TRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE 88 (267)
T ss_dssp -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 44679999999999999999999999999999999999999988888887664456788999999985 3556667777
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
.+++ +|+||||||.... ..++.+.+.++|++++++|+.|++.+++.++|.|++++.|+||++||.++.. +.++..
T Consensus 89 ~~g~--id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~ 163 (267)
T 1iy8_A 89 RFGR--IDGFFNNAGIEGK-QNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIR--GIGNQS 163 (267)
T ss_dssp HHSC--CSEEEECCCCCCC-CBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS--BCSSBH
T ss_pred HcCC--CCEEEECCCcCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcc--CCCCCc
Confidence 7775 5599999998642 2467889999999999999999999999999999888889999999999987 678899
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
.|++||+++++|+++++.|++++||+||+|+||+++|++..
T Consensus 164 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~ 204 (267)
T 1iy8_A 164 GYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVE 204 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchh
Confidence 99999999999999999999999999999999999999854
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=283.13 Aligned_cols=189 Identities=26% Similarity=0.370 Sum_probs=160.7
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEE-eCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
+.++||++|||||++|||+++|++|+++|++|+++ .|+.+..++..+++... +.++..+++|++|. +++.++++.
T Consensus 23 m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~ 100 (267)
T 3u5t_A 23 MMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAA--GGKALTAQADVSDPAAVRRLFATAE 100 (267)
T ss_dssp ----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 44679999999999999999999999999999987 56777788888877665 45688999999985 356666777
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCc
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
+.++ ++|+||||||+... .++.+.+.++|++++++|+.|++++++.++|.|++ .|+||++||.++.. +.++.
T Consensus 101 ~~~g--~iD~lvnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~--~~~~~ 172 (267)
T 3u5t_A 101 EAFG--GVDVLVNNAGIMPL--TTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV--GGRIINMSTSQVGL--LHPSY 172 (267)
T ss_dssp HHHS--CEEEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCTHHHH--CCTTC
T ss_pred HHcC--CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCeEEEEeChhhcc--CCCCc
Confidence 7777 47799999998764 67889999999999999999999999999999954 58999999999988 67889
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
..|++||+|+++|+++|+.|++++||+||+|+||+++|+|..
T Consensus 173 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~ 214 (267)
T 3u5t_A 173 GIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFL 214 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCcccc
Confidence 999999999999999999999999999999999999999975
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-38 Score=279.50 Aligned_cols=190 Identities=26% Similarity=0.377 Sum_probs=161.9
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
.++++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++..+.+|++|. +++.++++.
T Consensus 4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (261)
T 3n74_A 4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI-----GDAALAVAADISKEADVDAAVEAAL 78 (261)
T ss_dssp -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTSHHHHHHHHHHHH
T ss_pred cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHH
Confidence 46778999999999999999999999999999999999999988887766 45688999999984 356667777
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC----CcEEEEEcCccccccCC
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK----KGAIVNIGSGAAIVIPS 201 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~----~g~Iv~vsS~~~~~~~~ 201 (320)
+.+++ +|+||||||.... ..++.+.+.+++++++++|+.|++++++.++|+|.+++ .++||++||.++.. +
T Consensus 79 ~~~g~--id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~--~ 153 (261)
T 3n74_A 79 SKFGK--VDILVNNAGIGHK-PQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGR--P 153 (261)
T ss_dssp HHHSC--CCEEEECCCCCCC-SCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTS--C
T ss_pred HhcCC--CCEEEECCccCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcC--C
Confidence 77775 5599999998753 35677889999999999999999999999999998754 68999999999988 7
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 202 DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 202 ~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
.++...|++||+|+++|+++|+.|++++||+|++|+||+++|++..
T Consensus 154 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~ 199 (261)
T 3n74_A 154 RPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLT 199 (261)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--------
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhh
Confidence 7889999999999999999999999999999999999999999876
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-38 Score=276.52 Aligned_cols=189 Identities=29% Similarity=0.414 Sum_probs=169.0
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeC-CHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
++||+++||||++|||+++|++|+++|++|++++| +.+++++..+++.+. +.++..+++|++|. +++.++++.+.
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKL--GSDAIAVRADVANAEDVTNMVKQTVDV 79 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999 888888888888664 44688899999985 35566667777
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
+++ +|+||||||.... .++.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||.++.. +.++...
T Consensus 80 ~g~--id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~ 153 (246)
T 2uvd_A 80 FGQ--VDILVNNAGVTKD--NLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVT--GNPGQAN 153 (246)
T ss_dssp HSC--CCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH--CCTTBHH
T ss_pred cCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcC--CCCCCch
Confidence 775 5599999998754 567889999999999999999999999999999887789999999999987 6788999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
|++||+++++|+++++.|++++||+||+|+||+++|++..
T Consensus 154 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 193 (246)
T 2uvd_A 154 YVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTD 193 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSS
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchh
Confidence 9999999999999999999999999999999999999865
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-38 Score=277.23 Aligned_cols=214 Identities=20% Similarity=0.197 Sum_probs=179.3
Q ss_pred ccCCCEEEEECCC-CcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 50 RKYGSWALVTGPT-DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 50 ~~~gk~vlITGas-~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
.++||+++||||+ +|||+++|++|+++|++|++++|+.+++++..+++.+.+ +.++.++.+|++|. +++.++++.+
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~ 97 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLG-LGRVEAVVCDVTSTEAVDALITQTVE 97 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC-SSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC-CCceEEEEeCCCCHHHHHHHHHHHHH
Confidence 4779999999998 599999999999999999999999999999998886654 46799999999984 3566677777
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC-CCcEEEEEcCccccccCCCCCc
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-~~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
.+++ +|+||||||.... .++.+.+.+++++++++|+.|++++++.++|+|.++ +.++||++||.++.. +.++.
T Consensus 98 ~~g~--id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~ 171 (266)
T 3o38_A 98 KAGR--LDVLVNNAGLGGQ--TPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWR--AQHSQ 171 (266)
T ss_dssp HHSC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTC--CCTTC
T ss_pred HhCC--CcEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcC--CCCCC
Confidence 7775 5599999998764 678899999999999999999999999999999877 678999999999988 77889
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc------------cCCCCCCCHHHHHHHHHHHhC
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK------------RSSFFVPSTDVYARAAMRWIG 270 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~------------~~~~~~~~~~~~a~~i~~~l~ 270 (320)
..|++||+|+++|+++++.|++++||+|++|+||+++|++.... .+.....+||++|+.++..+.
T Consensus 172 ~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~i~~l~s 248 (266)
T 3o38_A 172 SHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRLASDEAFGRAAEPWEVAATIAFLAS 248 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----------------CCTTSSCCCHHHHHHHHHHHHS
T ss_pred chHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999997531 111123456666666665554
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-38 Score=277.76 Aligned_cols=233 Identities=21% Similarity=0.272 Sum_probs=194.0
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+. +.++..+.+|++|. +++.++++.+.
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (262)
T 1zem_A 4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVCDVTSEEAVIGTVDSVVRD 81 (262)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 356999999999999999999999999999999999999988888888654 45688899999985 35566677777
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
+++ +|+||||||.... ..++.+.+.++|++++++|+.|++++++.++|.|.+++.|+||++||.++.. +.++...
T Consensus 82 ~g~--id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~ 156 (262)
T 1zem_A 82 FGK--IDFLFNNAGYQGA-FAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVK--GPPNMAA 156 (262)
T ss_dssp HSC--CCEEEECCCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHS--CCTTBHH
T ss_pred hCC--CCEEEECCCCCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc--CCCCCch
Confidence 775 5599999998622 3567889999999999999999999999999999887789999999999988 6788999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcccc-------CCCCCC-CHHHHHHHHHHHhCCCCcccCCc
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKR-------SSFFVP-STDVYARAAMRWIGYEPCCTPYW 279 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~-------~~~~~~-~~~~~a~~i~~~l~~~~~~~~~~ 279 (320)
|++||+++.+|+++++.|++++||+||+|+||+++|+|..... ...... .++...+.+....+.++...|++
T Consensus 157 Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~d 236 (262)
T 1zem_A 157 YGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINE 236 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCCCCcCHHH
Confidence 9999999999999999999999999999999999999864310 000011 23324455555666678899999
Q ss_pred hHHHHHHHHh
Q 020854 280 PHSFIWGVLS 289 (320)
Q Consensus 280 ~~~~~~~l~~ 289 (320)
++..+.++++
T Consensus 237 vA~~v~~l~s 246 (262)
T 1zem_A 237 IPGVVAFLLG 246 (262)
T ss_dssp SHHHHHHHHS
T ss_pred HHHHHHHHcC
Confidence 9999888875
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-38 Score=278.27 Aligned_cols=232 Identities=24% Similarity=0.265 Sum_probs=180.1
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHH-HHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK-LKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
++||+++||||++|||++++++|+++|++|++++|+.++ +++..+++.+.. +.++..+.+|++|. +++.++++.+.
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~ 80 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH-GVKVLYDGADLSKGEAVRGLVDNAVRQ 80 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH-TSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhcc-CCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence 468999999999999999999999999999999999887 888877776542 34678899999985 35566677777
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
+++ +|+||||||.... .++.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||.++.. +.++...
T Consensus 81 ~g~--iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~ 154 (260)
T 1x1t_A 81 MGR--IDILVNNAGIQHT--ALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLV--ASANKSA 154 (260)
T ss_dssp HSC--CSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CCTTCHH
T ss_pred cCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCc--CCCCCch
Confidence 775 5599999998654 567889999999999999999999999999999887789999999999987 6788999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCC---CCCCHHHHHHHH-HHHhCCCCcccCCchHHH
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSF---FVPSTDVYARAA-MRWIGYEPCCTPYWPHSF 283 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~---~~~~~~~~a~~i-~~~l~~~~~~~~~~~~~~ 283 (320)
|++||+++++|+++++.|++++||+||+|+||+++|++.....+.. ...++++..+.+ ....+.++...|++....
T Consensus 155 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~ 234 (260)
T 1x1t_A 155 YVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGT 234 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHHHH
Confidence 9999999999999999999999999999999999999975321100 001112222222 333444566677777776
Q ss_pred HHHHHh
Q 020854 284 IWGVLS 289 (320)
Q Consensus 284 ~~~l~~ 289 (320)
+.++++
T Consensus 235 ~~~l~s 240 (260)
T 1x1t_A 235 AVFLAS 240 (260)
T ss_dssp HHHHHS
T ss_pred HHHHhC
Confidence 666654
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-38 Score=276.16 Aligned_cols=215 Identities=21% Similarity=0.280 Sum_probs=181.3
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeC--CCC--cHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDF--SGD--LDEGVERIK 125 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~--~~~--~~~~~~~~~ 125 (320)
.++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+ ......+.+|+ +|. +++.++++.
T Consensus 11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~d~d~~~~~~~~~~~~~~~ 89 (247)
T 3i1j_A 11 LLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG-QPQPLIIALNLENATAQQYRELAARVE 89 (247)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-SCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC-CCCceEEEeccccCCHHHHHHHHHHHH
Confidence 4679999999999999999999999999999999999999999999987764 23455666666 653 245566666
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCc
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
+.+++ +|+||||||...+ ..++.+.+.+++++++++|+.|++++++.++|+|++++.|+||++||..+.. +.++.
T Consensus 90 ~~~g~--id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~ 164 (247)
T 3i1j_A 90 HEFGR--LDGLLHNASIIGP-RTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRK--GRANW 164 (247)
T ss_dssp HHHSC--CSEEEECCCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTS--CCTTC
T ss_pred HhCCC--CCEEEECCccCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcC--CCCCc
Confidence 67775 5599999998643 3578899999999999999999999999999999988889999999999988 77889
Q ss_pred hhhHHHHHHHHHHHHHHHHHHcc-CCceEEEEeccceecCCCccc---cCCCCCCCHHHHHHHHHHHhC
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRK-SGIDVQCQVPLYVATKMASIK---RSSFFVPSTDVYARAAMRWIG 270 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~-~gi~v~~v~PG~v~T~~~~~~---~~~~~~~~~~~~a~~i~~~l~ 270 (320)
..|++||+|+++|+++|+.|+++ .||+|++|+||+++|+|.... .......+|+++|+.++..+.
T Consensus 165 ~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~p~dva~~~~~l~s 233 (247)
T 3i1j_A 165 GAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYPDENPLNNPAPEDIMPVYLYLMG 233 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHSTTSCGGGSCCGGGGTHHHHHHHS
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhcccccCccCCCCHHHHHHHHHHHhC
Confidence 99999999999999999999987 899999999999999986531 122234667777777776664
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-38 Score=276.58 Aligned_cols=192 Identities=26% Similarity=0.349 Sum_probs=170.6
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
.++++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+. +.++..+.+|++|. +++.++++.
T Consensus 4 ~~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (260)
T 2ae2_A 4 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVCDLSSRSERQELMNTVA 81 (260)
T ss_dssp TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 35577999999999999999999999999999999999999988888888654 45788999999985 345556666
Q ss_pred HHH-cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCC
Q 020854 126 EAI-EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL 204 (320)
Q Consensus 126 ~~~-~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~ 204 (320)
+.+ ++ +|+||||||.... .++.+.+.+++++++++|+.|++++++.++|.|++++.|+||++||.++.. +.++
T Consensus 82 ~~~~g~--id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~ 155 (260)
T 2ae2_A 82 NHFHGK--LNILVNNAGIVIY--KEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL--AVPY 155 (260)
T ss_dssp HHTTTC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTS--CCTT
T ss_pred HHcCCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc--CCCC
Confidence 666 54 6699999998754 567889999999999999999999999999999988889999999999987 6788
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
...|++||+++++++++++.|++++||+||+|+||+++|++..
T Consensus 156 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 198 (260)
T 2ae2_A 156 EAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVE 198 (260)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchh
Confidence 8999999999999999999999999999999999999999864
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-38 Score=280.12 Aligned_cols=218 Identities=21% Similarity=0.241 Sum_probs=180.4
Q ss_pred CcccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeC-CHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHH
Q 020854 46 AKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVE 122 (320)
Q Consensus 46 ~~~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~ 122 (320)
...++++||+++||||++|||+++|++|+++|++|++++| +.+..++..+++.+. +.++..+++|++|. +++.++
T Consensus 22 ~~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~ 99 (271)
T 4iin_A 22 SNAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK--GYKAAVIKFDAASESDFIEAIQ 99 (271)
T ss_dssp --CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHH
T ss_pred hhhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHH
Confidence 3456778999999999999999999999999999999999 555566666666654 46788999999985 355666
Q ss_pred HHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCC
Q 020854 123 RIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD 202 (320)
Q Consensus 123 ~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~ 202 (320)
++.+.+++ +|+||||||.... .++.+.+.+++++++++|+.|++.+++.++|.|.+++.|+||++||.++.. +.
T Consensus 100 ~~~~~~g~--id~li~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--~~ 173 (271)
T 4iin_A 100 TIVQSDGG--LSYLVNNAGVVRD--KLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGER--GN 173 (271)
T ss_dssp HHHHHHSS--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH--CC
T ss_pred HHHHhcCC--CCEEEECCCcCCC--cccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcC--CC
Confidence 66666675 5599999998765 667889999999999999999999999999999988889999999999988 77
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc-----------cCCCCCCCHHHHHHHHHHHhCC
Q 020854 203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK-----------RSSFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 203 ~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~-----------~~~~~~~~~~~~a~~i~~~l~~ 271 (320)
++.+.|++||+|+++|+++++.|++++||+|++|+||+++|+|.... .+.....+|+++|+.++..+..
T Consensus 174 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~i~~l~s~ 253 (271)
T 4iin_A 174 MGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKADYVKNIPLNRLGSAKEVAEAVAFLLSD 253 (271)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC------------CGGGCTTCSCBCHHHHHHHHHHHHSG
T ss_pred CCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCC
Confidence 88999999999999999999999999999999999999999997631 1222345677777777666543
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-38 Score=276.85 Aligned_cols=227 Identities=26% Similarity=0.299 Sum_probs=161.8
Q ss_pred cccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHH
Q 020854 47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERI 124 (320)
Q Consensus 47 ~~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~ 124 (320)
..++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+. +.++..+.+|++|. +++.++++
T Consensus 3 ~~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~ 80 (253)
T 3qiv_A 3 GSMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD--GGTAISVAVDVSDPESAKAMADRT 80 (253)
T ss_dssp --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHH
T ss_pred cccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHH
Confidence 356678999999999999999999999999999999999999999999888765 45788999999984 35666777
Q ss_pred HHHHcCCCeEEEEEccCCCCC-ccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCC
Q 020854 125 KEAIEGLDVGVLINNVGISYP-YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP 203 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~ 203 (320)
.+.+++ +|+||||||.... ...++.+.+.+++++++++|+.|++++++.++|.|.+++.|+||++||.++..
T Consensus 81 ~~~~g~--id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----- 153 (253)
T 3qiv_A 81 LAEFGG--IDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWL----- 153 (253)
T ss_dssp HHHHSC--CCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC----------
T ss_pred HHHcCC--CCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccC-----
Confidence 777775 5599999998532 23567789999999999999999999999999999988899999999998863
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHH
Q 020854 204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSF 283 (320)
Q Consensus 204 ~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~ 283 (320)
+...|++||+|+++|+++++.|++++||+|++|+||+++|++... ..+++..+.+.+..+.++...|++....
T Consensus 154 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~dva~~ 226 (253)
T 3qiv_A 154 YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRT-------TTPKEMVDDIVKGLPLSRMGTPDDLVGM 226 (253)
T ss_dssp ------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC--------------------------------------CCHHHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhh-------cCcHHHHHHHhccCCCCCCCCHHHHHHH
Confidence 356799999999999999999999999999999999999998764 2234555555666666667777777777
Q ss_pred HHHHHh
Q 020854 284 IWGVLS 289 (320)
Q Consensus 284 ~~~l~~ 289 (320)
+.++++
T Consensus 227 ~~~l~s 232 (253)
T 3qiv_A 227 CLFLLS 232 (253)
T ss_dssp HHHHHS
T ss_pred HHHHcC
Confidence 766654
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-39 Score=283.70 Aligned_cols=225 Identities=17% Similarity=0.149 Sum_probs=175.8
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCC---HHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN---PDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVE 122 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~ 122 (320)
.++++||++|||||++|||+++|++|+++|++|++++|+ .+++++..+++.+. +.++..+++|++|. +++.++
T Consensus 6 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~ 83 (262)
T 3ksu_A 6 YHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ--GAKVALYQSDLSNEEEVAKLFD 83 (262)
T ss_dssp CSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT--TCEEEEEECCCCSHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHH
Confidence 356779999999999999999999999999999998764 55677777777665 56789999999985 356666
Q ss_pred HHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCC
Q 020854 123 RIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD 202 (320)
Q Consensus 123 ~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~ 202 (320)
++.+.+++ +|+||||||+... .++.+.+.++|++++++|+.|++++++.++|+| ++.|+||++||.++.. +.
T Consensus 84 ~~~~~~g~--iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m--~~~g~iv~isS~~~~~--~~ 155 (262)
T 3ksu_A 84 FAEKEFGK--VDIAINTVGKVLK--KPIVETSEAEFDAMDTINNKVAYFFIKQAAKHM--NPNGHIITIATSLLAA--YT 155 (262)
T ss_dssp HHHHHHCS--EEEEEECCCCCCS--SCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTE--EEEEEEEEECCCHHHH--HH
T ss_pred HHHHHcCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhh--cCCCEEEEEechhhcc--CC
Confidence 77777764 7799999998765 678899999999999999999999999999999 3469999999999988 56
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHH
Q 020854 203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHS 282 (320)
Q Consensus 203 ~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~ 282 (320)
++.+.|++||+|+.+|+++|+.|++++||+||+|+||+|+|+|..... .++..+......+.++...|++.+.
T Consensus 156 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~~~~r~~~pedvA~ 228 (262)
T 3ksu_A 156 GFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQE-------TKESTAFHKSQAMGNQLTKIEDIAP 228 (262)
T ss_dssp CCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC-------------------CCCCSCCGGGTHH
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC-------chHHHHHHHhcCcccCCCCHHHHHH
Confidence 778899999999999999999999999999999999999999875311 1122223333444556667777777
Q ss_pred HHHHHHh
Q 020854 283 FIWGVLS 289 (320)
Q Consensus 283 ~~~~l~~ 289 (320)
.+.++++
T Consensus 229 ~v~~L~s 235 (262)
T 3ksu_A 229 IIKFLTT 235 (262)
T ss_dssp HHHHHHT
T ss_pred HHHHHcC
Confidence 6666654
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-37 Score=272.22 Aligned_cols=184 Identities=23% Similarity=0.355 Sum_probs=162.7
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||+++||||++|||++++++|+++|++|++++|+.+++++..+++ + +..+.+|++|. +++.++++.+.
T Consensus 2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~--~~~~~~D~~~~~~~~~~~~~~~~~ 74 (245)
T 1uls_A 2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-----G--AHPVVMDVADPASVERGFAEALAH 74 (245)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----T--CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----C--CEEEEecCCCHHHHHHHHHHHHHH
Confidence 356999999999999999999999999999999999998877665433 2 67888999985 35566777777
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
+++ +|+||||||.... .++.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||.+ .. +.++...
T Consensus 75 ~g~--id~lvn~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~--~~~~~~~ 147 (245)
T 1uls_A 75 LGR--LDGVVHYAGITRD--NFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YL--GNLGQAN 147 (245)
T ss_dssp HSS--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GG--CCTTCHH
T ss_pred cCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hc--CCCCchh
Confidence 775 5599999998754 567889999999999999999999999999999888889999999998 66 6688899
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
|++||+++.+|+++++.|++++||+||+|+||+++|++..
T Consensus 148 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~ 187 (245)
T 1uls_A 148 YAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTA 187 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTS
T ss_pred HHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchh
Confidence 9999999999999999999999999999999999999865
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-37 Score=272.34 Aligned_cols=225 Identities=22% Similarity=0.221 Sum_probs=185.6
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G--~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
||+++||||++|||+++|++|+++| ++|++++|+.+++++..+++ +.++..+.+|++|. +++.++++.+.+
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 76 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY-----GDRFFYVVGDITEDSVLKQLVNAAVKGH 76 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH-----GGGEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh-----CCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence 7999999999999999999999985 78999999999888877665 45688999999985 356677777777
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
++ +|+||||||...+ ..++.+.+.++|++++++|+.|++++++.++|+|++++ |+||++||.++.. +.++...|
T Consensus 77 g~--id~lvnnAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~--~~~~~~~Y 150 (254)
T 3kzv_A 77 GK--IDSLVANAGVLEP-VQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNM--YFSSWGAY 150 (254)
T ss_dssp SC--CCEEEEECCCCCC-CTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCC--SSCCSHHH
T ss_pred CC--ccEEEECCcccCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhcc--CCCCcchH
Confidence 75 5599999998653 35688999999999999999999999999999998765 9999999999988 77889999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCC-CCCHHHHHHHHHHHhCCCCcccCCchHHHHHHH
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFF-VPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGV 287 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l 287 (320)
++||+|+++|+++|+.|+ .||+||+|+||+++|+|......... ....++..+.+....+.++...|++....+.++
T Consensus 151 ~asK~a~~~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~L 228 (254)
T 3kzv_A 151 GSSKAALNHFAMTLANEE--RQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKL 228 (254)
T ss_dssp HHHHHHHHHHHHHHHHHC--TTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhc--cCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcccHHHHHHHH
Confidence 999999999999999998 68999999999999999874222110 111344456667777888899999999988887
Q ss_pred Hhh
Q 020854 288 LSI 290 (320)
Q Consensus 288 ~~~ 290 (320)
++-
T Consensus 229 ~s~ 231 (254)
T 3kzv_A 229 ALH 231 (254)
T ss_dssp HHH
T ss_pred Hhh
Confidence 753
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=277.11 Aligned_cols=223 Identities=22% Similarity=0.274 Sum_probs=180.8
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCC-HHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-PDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERI 124 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~ 124 (320)
.++++||++|||||++|||+++|++|+++|++|++++++ .++.++..+++.+. +.++..+.+|++|. +++.++++
T Consensus 26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~ 103 (271)
T 3v2g_A 26 SISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA--GGRAVAIRADNRDAEAIEQAIRET 103 (271)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHH
Confidence 346789999999999999999999999999999998654 56777888888664 45788999999985 35667777
Q ss_pred HHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCC
Q 020854 125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL 204 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~ 204 (320)
.+.+++ +|+||||||+... .++.+.+.++|++++++|+.|++++++.++|.|. +.|+||++||..+... +.++
T Consensus 104 ~~~~g~--iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~--~~g~iv~isS~~~~~~-~~~~ 176 (271)
T 3v2g_A 104 VEALGG--LDILVNSAGIWHS--APLEETTVADFDEVMAVNFRAPFVAIRSASRHLG--DGGRIITIGSNLAELV-PWPG 176 (271)
T ss_dssp HHHHSC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCC--TTCEEEEECCGGGTCC-CSTT
T ss_pred HHHcCC--CcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHh--cCCEEEEEeChhhccC-CCCC
Confidence 777775 5599999998764 6788999999999999999999999999999985 3689999999888662 3678
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHH
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFI 284 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~ 284 (320)
...|++||+|+++|+++|+.|++++||+||+|+||+|+|+|..... +..+.....++.++...|++.+.++
T Consensus 177 ~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~---------~~~~~~~~~~~~~r~~~pedvA~~v 247 (271)
T 3v2g_A 177 ISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADG---------DHAEAQRERIATGSYGEPQDIAGLV 247 (271)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSC---------SSHHHHHHTCTTSSCBCHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccc---------hhHHHHHhcCCCCCCCCHHHHHHHH
Confidence 8999999999999999999999999999999999999999975311 0112223334444555555555555
Q ss_pred HHHH
Q 020854 285 WGVL 288 (320)
Q Consensus 285 ~~l~ 288 (320)
.|++
T Consensus 248 ~fL~ 251 (271)
T 3v2g_A 248 AWLA 251 (271)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5544
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-37 Score=281.07 Aligned_cols=190 Identities=27% Similarity=0.381 Sum_probs=169.6
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCC------------HHHHHHHHHHHHhhcCCceEEEEEEeCCCC-
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN------------PDKLKDVSDSIQAKYAKTQIKSVVVDFSGD- 116 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~- 116 (320)
+++||++|||||++|||+++|++|+++|++|++++|+ .+++++..+++.+. +.++..+++|++|.
T Consensus 43 ~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~ 120 (317)
T 3oec_A 43 RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ--GRRIIARQADVRDLA 120 (317)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTCHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhc--CCeEEEEECCCCCHH
Confidence 4679999999999999999999999999999999886 67777777777654 45789999999984
Q ss_pred -cHHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCc
Q 020854 117 -LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSG 194 (320)
Q Consensus 117 -~~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~ 194 (320)
+++.++++.+.+++ +|+||||||+... .++.+.+.++|++++++|+.|++++++.++|.|.+++ .|+||++||.
T Consensus 121 ~v~~~~~~~~~~~g~--iD~lVnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~ 196 (317)
T 3oec_A 121 SLQAVVDEALAEFGH--IDILVSNVGISNQ--GEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSST 196 (317)
T ss_dssp HHHHHHHHHHHHHSC--CCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCG
T ss_pred HHHHHHHHHHHHcCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcH
Confidence 35667777777775 5599999998765 6788999999999999999999999999999998775 7999999999
Q ss_pred cccccCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 195 AAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 195 ~~~~~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
++.. +.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++..
T Consensus 197 ~~~~--~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~ 247 (317)
T 3oec_A 197 VGLR--GAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMAL 247 (317)
T ss_dssp GGSS--CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHH
T ss_pred HhcC--CCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCcccc
Confidence 9988 77889999999999999999999999999999999999999999853
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-38 Score=276.83 Aligned_cols=232 Identities=19% Similarity=0.223 Sum_probs=181.3
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHH---cCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAK---TGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERI 124 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~---~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~ 124 (320)
+++||+++||||++|||+++|++|++ +|++|++++|+.+++++..+++.+.+++.++..+.+|++|. +++.++++
T Consensus 3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 82 (259)
T 1oaa_A 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV 82 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence 35699999999999999999999999 89999999999999999888887765566789999999985 23334444
Q ss_pred HH--HHcCCCeEEEEEccCCCCCccccccC-CCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC--CCcEEEEEcCcccccc
Q 020854 125 KE--AIEGLDVGVLINNVGISYPYARFFHE-VDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR--KKGAIVNIGSGAAIVI 199 (320)
Q Consensus 125 ~~--~~~~~~id~lI~nAG~~~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~--~~g~Iv~vsS~~~~~~ 199 (320)
.+ .++++|+|+||||||.......++.+ .+.++|++++++|+.|++++++.++|.|.++ +.|+||++||.++..
T Consensus 83 ~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~- 161 (259)
T 1oaa_A 83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ- 161 (259)
T ss_dssp HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS-
T ss_pred HhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcC-
Confidence 44 23444555999999986432245667 7899999999999999999999999999877 579999999999988
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCc
Q 020854 200 PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYW 279 (320)
Q Consensus 200 ~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~ 279 (320)
+.++...|++||+|+++|+++++.|+++ |+||+|+||+++|+|....... ... ++..+.+....+.++...|++
T Consensus 162 -~~~~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~PG~v~T~~~~~~~~~--~~~-~~~~~~~~~~~p~~~~~~p~d 235 (259)
T 1oaa_A 162 -PYKGWGLYCAGKAARDMLYQVLAAEEPS--VRVLSYAPGPLDNDMQQLARET--SKD-PELRSKLQKLKSDGALVDCGT 235 (259)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCSBSSHHHHHHHHH--CSC-HHHHHHHHHHHHTTCSBCHHH
T ss_pred -CCCCccHHHHHHHHHHHHHHHHHhhCCC--ceEEEecCCCcCcchHHHHhhc--cCC-hhHHHHHHHhhhcCCcCCHHH
Confidence 7788999999999999999999999963 9999999999999986531000 001 222233333444455566666
Q ss_pred hHHHHHHHH
Q 020854 280 PHSFIWGVL 288 (320)
Q Consensus 280 ~~~~~~~l~ 288 (320)
....+.+++
T Consensus 236 vA~~v~~l~ 244 (259)
T 1oaa_A 236 SAQKLLGLL 244 (259)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666555554
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-38 Score=277.33 Aligned_cols=190 Identities=22% Similarity=0.304 Sum_probs=162.3
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEE-eCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
.+++||+++||||++|||+++|++|+++|++|+++ +|+.+..++..+++.+. +.++..+.+|++|. +++.++++.
T Consensus 4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (259)
T 3edm_A 4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL--GRSALAIKADLTNAAEVEAAISAAA 81 (259)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTT--TSCCEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHH
Confidence 34679999999999999999999999999999998 66777788888888664 45688899999985 356667777
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccc-ccCCCCC
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAI-VIPSDPL 204 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~-~~~~~~~ 204 (320)
+.+++ +|+||||||.... ..++.+.+.++|++++++|+.|++++++.++|.|.+ .|+||++||.++. . +.++
T Consensus 82 ~~~g~--id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~--~~~~ 154 (259)
T 3edm_A 82 DKFGE--IHGLVHVAGGLIA-RKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK--GGAIVTFSSQAGRDG--GGPG 154 (259)
T ss_dssp HHHCS--EEEEEECCCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHC--CSTT
T ss_pred HHhCC--CCEEEECCCccCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCEEEEEcCHHhccC--CCCC
Confidence 77774 7799999998633 367889999999999999999999999999999965 6899999999998 4 5788
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI 248 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~ 248 (320)
...|++||+|+++|+++++.|+++. |+||+|+||+++|+|...
T Consensus 155 ~~~Y~asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~ 197 (259)
T 3edm_A 155 ALAYATSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDT 197 (259)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC-----
T ss_pred cHHHHHHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCccccc
Confidence 8999999999999999999999886 999999999999999763
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-37 Score=272.14 Aligned_cols=227 Identities=22% Similarity=0.263 Sum_probs=189.0
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
.++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+. +.++..+.+|++|. +++.++++.+.
T Consensus 11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 88 (260)
T 2zat_A 11 PLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE--GLSVTGTVCHVGKAEDRERLVAMAVNL 88 (260)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 466999999999999999999999999999999999999888888888654 44688899999984 34566666777
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
+++ +|+||||||.... ..++.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||.++.. +.++...
T Consensus 89 ~g~--iD~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~ 163 (260)
T 2zat_A 89 HGG--VDILVSNAAVNPF-FGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYH--PFPNLGP 163 (260)
T ss_dssp HSC--CCEEEECCCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS--CCTTBHH
T ss_pred cCC--CCEEEECCCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcC--CCCCchh
Confidence 775 5599999998642 2567789999999999999999999999999999988889999999999988 6788999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHH
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGV 287 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l 287 (320)
|++||+++++|+++++.|++++||+||+|+||+++|++..... ..+ +..+.+....+.++...|.+...++.++
T Consensus 164 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~dva~~v~~l 237 (260)
T 2zat_A 164 YNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLW-----MDK-ARKEYMKESLRIRRLGNPEDCAGIVSFL 237 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHH-----SSH-HHHHHHHHHHTCSSCBCGGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcc-----cCh-HHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999865310 111 2223334445566777888888877776
Q ss_pred Hh
Q 020854 288 LS 289 (320)
Q Consensus 288 ~~ 289 (320)
++
T Consensus 238 ~s 239 (260)
T 2zat_A 238 CS 239 (260)
T ss_dssp TS
T ss_pred cC
Confidence 54
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-38 Score=276.92 Aligned_cols=225 Identities=24% Similarity=0.256 Sum_probs=186.2
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEe-CCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
...++|++|||||++|||+++|++|+++|++|++++ |+.++.++..+++.+. +.++..+.+|++|. +++.++++.
T Consensus 9 ~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~ 86 (256)
T 3ezl_A 9 MVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL--GFDFYASEGNVGDWDSTKQAFDKVK 86 (256)
T ss_dssp ----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCeeEEEecCCCCHHHHHHHHHHHH
Confidence 346799999999999999999999999999999988 7777777777777664 45688999999984 355666666
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCc
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
+.++ ++|+||||||.... .++.+.+.+++++++++|+.|++++++.++|.|.+++.|+||++||.++.. +.++.
T Consensus 87 ~~~g--~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~ 160 (256)
T 3ezl_A 87 AEVG--EIDVLVNNAGITRD--VVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQK--GQFGQ 160 (256)
T ss_dssp HHTC--CEEEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGG--SCSCC
T ss_pred HhcC--CCCEEEECCCCCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcc--CCCCC
Confidence 6666 47799999998764 568899999999999999999999999999999988889999999999998 77889
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHH
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIW 285 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~ 285 (320)
+.|++||+|+++|+++++.|++++||+|++|+||+++|+|.... .++..+.+....+.++...|++....+.
T Consensus 161 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--------~~~~~~~~~~~~~~~~~~~~~dva~~~~ 232 (256)
T 3ezl_A 161 TNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI--------RPDVLEKIVATIPVRRLGSPDEIGSIVA 232 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS--------CHHHHHHHHHHSTTSSCBCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcccccc--------CHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 99999999999999999999999999999999999999997631 2233444555555566666666666666
Q ss_pred HHHh
Q 020854 286 GVLS 289 (320)
Q Consensus 286 ~l~~ 289 (320)
++++
T Consensus 233 ~l~s 236 (256)
T 3ezl_A 233 WLAS 236 (256)
T ss_dssp HHHS
T ss_pred HHhC
Confidence 6553
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-37 Score=274.89 Aligned_cols=211 Identities=21% Similarity=0.257 Sum_probs=175.7
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCC------------HHHHHHHHHHHHhhcCCceEEEEEEeCCC
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN------------PDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~D~~~ 115 (320)
..+++||++|||||++|||+++|++|+++|++|++++|+ .+++++..+++... +.++..+++|++|
T Consensus 8 ~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~ 85 (278)
T 3sx2_A 8 EGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI--GSRIVARQADVRD 85 (278)
T ss_dssp -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH--TCCEEEEECCTTC
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhc--CCeEEEEeCCCCC
Confidence 345779999999999999999999999999999999987 77777777777665 4578999999998
Q ss_pred C--cHHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEc
Q 020854 116 D--LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIG 192 (320)
Q Consensus 116 ~--~~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vs 192 (320)
. +++.++++.+.+++ +|+||||||+... . .+.++|++++++|+.|+++++++++|+|.+++ .|+||++|
T Consensus 86 ~~~v~~~~~~~~~~~g~--id~lv~nAg~~~~--~----~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~is 157 (278)
T 3sx2_A 86 RESLSAALQAGLDELGR--LDIVVANAGIAPM--S----AGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLIS 157 (278)
T ss_dssp HHHHHHHHHHHHHHHCC--CCEEEECCCCCCC--S----STHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred HHHHHHHHHHHHHHcCC--CCEEEECCCCCCC--C----CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEc
Confidence 5 35666777777775 5599999998653 1 25889999999999999999999999998765 79999999
Q ss_pred CccccccCCC----CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcccc------------------
Q 020854 193 SGAAIVIPSD----PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKR------------------ 250 (320)
Q Consensus 193 S~~~~~~~~~----~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~------------------ 250 (320)
|.++.. +. ++...|++||+|+++|+++|+.|++++||+||+|+||+|+|+|.....
T Consensus 158 S~~~~~--~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (278)
T 3sx2_A 158 SSAGLA--GVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAM 235 (278)
T ss_dssp CGGGTS--CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTT
T ss_pred cHHhcC--CCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhh
Confidence 999987 44 677899999999999999999999999999999999999999975200
Q ss_pred ---CCCCCCCHHHHHHHHHHHhC
Q 020854 251 ---SSFFVPSTDVYARAAMRWIG 270 (320)
Q Consensus 251 ---~~~~~~~~~~~a~~i~~~l~ 270 (320)
.+....+||++|+.++..+.
T Consensus 236 ~~~~p~~~~~p~dvA~~v~~l~s 258 (278)
T 3sx2_A 236 GNAMPVEVLAPEDVANAVAWLVS 258 (278)
T ss_dssp SCSSSCSSBCHHHHHHHHHHHTS
T ss_pred hhhcCcCcCCHHHHHHHHHHHhC
Confidence 00224467777777776654
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-37 Score=276.34 Aligned_cols=229 Identities=19% Similarity=0.196 Sum_probs=182.9
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++..+.+|++|. +++.++++.+.
T Consensus 2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 76 (281)
T 3zv4_A 2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH-----GGNAVGVVGDVRSLQDQKRAAERCLAA 76 (281)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----BTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc-----CCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 467999999999999999999999999999999999998887766543 45688999999984 35667777777
Q ss_pred HcCCCeEEEEEccCCCCCc---cccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCC
Q 020854 128 IEGLDVGVLINNVGISYPY---ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL 204 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~---~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~ 204 (320)
+++ +|+||||||+.... .....+.+.++|++++++|+.|+++++++++|+|.++ +|+||++||.++.. +.++
T Consensus 77 ~g~--iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~ 151 (281)
T 3zv4_A 77 FGK--IDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS-RGSVVFTISNAGFY--PNGG 151 (281)
T ss_dssp HSC--CCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGTS--SSSS
T ss_pred cCC--CCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCeEEEEecchhcc--CCCC
Confidence 775 55999999986431 1122345567899999999999999999999999865 49999999999988 7788
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCC--CCCCHHHHHHHHHHHhCCCCcccCCchHH
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSF--FVPSTDVYARAAMRWIGYEPCCTPYWPHS 282 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~--~~~~~~~~a~~i~~~l~~~~~~~~~~~~~ 282 (320)
...|++||+|+++|+++|+.|+++. |+||+|+||+++|+|........ ......+..+.+....+.+|...|++...
T Consensus 152 ~~~Y~asKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~ 230 (281)
T 3zv4_A 152 GPLYTATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTG 230 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGGGGSH
T ss_pred CchhHHHHHHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHHHHHH
Confidence 9999999999999999999999987 99999999999999975321110 01111124455666677778889999998
Q ss_pred HHHHHHh
Q 020854 283 FIWGVLS 289 (320)
Q Consensus 283 ~~~~l~~ 289 (320)
.+.|+++
T Consensus 231 ~v~fL~s 237 (281)
T 3zv4_A 231 AYVFFAT 237 (281)
T ss_dssp HHHHHHS
T ss_pred HHHHhhc
Confidence 8888775
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-37 Score=273.54 Aligned_cols=192 Identities=29% Similarity=0.412 Sum_probs=170.5
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++..+.+|++|. +++.++++.+
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (263)
T 3ai3_A 3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKF-GVRVLEVAVDVATPEGVDAVVESVRS 81 (263)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 45679999999999999999999999999999999999999888888886542 34688899999985 3556666777
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
.+++ +|+||||||.... .++.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||.++.. +.++..
T Consensus 82 ~~g~--id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~ 155 (263)
T 3ai3_A 82 SFGG--ADILVNNAGTGSN--ETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQ--PLWYEP 155 (263)
T ss_dssp HHSS--CSEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CCTTCH
T ss_pred HcCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcC--CCCCcc
Confidence 7775 5599999998754 568889999999999999999999999999999887789999999999988 678889
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
.|++||+++++++++++.|++++||+||+|+||+++|++..
T Consensus 156 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 196 (263)
T 3ai3_A 156 IYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWI 196 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchh
Confidence 99999999999999999999999999999999999999854
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=275.29 Aligned_cols=192 Identities=22% Similarity=0.280 Sum_probs=168.4
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++++||+++||||++|||++++++|+++|++|++++|+.+++++..+++.+..++.++..+.+|++|. +++.++++.+
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (260)
T 2z1n_A 3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD 82 (260)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 44679999999999999999999999999999999999999888888886542233688999999985 2344455554
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
.++ +|+||||||.... .++.+.+.++|++++++|+.|++++++.++|.|.+++.|+||++||.++.. +.++..
T Consensus 83 ~~g---id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~ 155 (260)
T 2z1n_A 83 LGG---ADILVYSTGGPRP--GRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLR--PWQDLA 155 (260)
T ss_dssp TTC---CSEEEECCCCCCC--BCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CCTTBH
T ss_pred hcC---CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcC--CCCCCc
Confidence 444 5699999998654 567889999999999999999999999999999888889999999999988 678899
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
.|++||+++++++++++.|++++||+||+|+||+++|++..
T Consensus 156 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 196 (260)
T 2z1n_A 156 LSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVR 196 (260)
T ss_dssp HHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC
T ss_pred hhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhh
Confidence 99999999999999999999999999999999999999865
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=272.84 Aligned_cols=223 Identities=22% Similarity=0.325 Sum_probs=167.5
Q ss_pred CcccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHH
Q 020854 46 AKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIK 125 (320)
Q Consensus 46 ~~~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 125 (320)
.....+++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++ ...+....+|+++. +.++++.
T Consensus 7 ~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~--~~~~~~~ 79 (249)
T 3f9i_A 7 HHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL-----KDNYTIEVCNLANK--EECSNLI 79 (249)
T ss_dssp --CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CSSEEEEECCTTSH--HHHHHHH
T ss_pred cccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----ccCccEEEcCCCCH--HHHHHHH
Confidence 3445677999999999999999999999999999999999999988877766 34678889999986 6667776
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCc
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
+++++ +|+||||||.... .++.+.+.+++++++++|+.|++++++.++|.|.+++.|+||++||.++.. +.++.
T Consensus 80 ~~~~~--id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~ 153 (249)
T 3f9i_A 80 SKTSN--LDILVCNAGITSD--TLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIA--GNPGQ 153 (249)
T ss_dssp HTCSC--CSEEEECCC---------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC----CCSCS
T ss_pred HhcCC--CCEEEECCCCCCC--CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhcc--CCCCC
Confidence 66654 6699999998764 556788889999999999999999999999999988889999999999988 77889
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHH
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIW 285 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~ 285 (320)
..|++||+|+++|+++++.|++++||+|++|+||+++|++.... .++..+.+....+.++...|++....+.
T Consensus 154 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--------~~~~~~~~~~~~~~~~~~~~~dva~~~~ 225 (249)
T 3f9i_A 154 ANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKL--------NEKQREAIVQKIPLGTYGIPEDVAYAVA 225 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------C--------CHHHHHHHHHHCTTCSCBCHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCccccc--------CHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 99999999999999999999999999999999999999997631 1223333444444445555555555555
Q ss_pred HHHh
Q 020854 286 GVLS 289 (320)
Q Consensus 286 ~l~~ 289 (320)
++++
T Consensus 226 ~l~s 229 (249)
T 3f9i_A 226 FLAS 229 (249)
T ss_dssp HHHS
T ss_pred HHcC
Confidence 5443
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-37 Score=270.11 Aligned_cols=187 Identities=26% Similarity=0.359 Sum_probs=159.2
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH-HHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP-DKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
+++||+++||||++|||+++|++|+++|++|++++|+. +++++ ++.+. +.++..+++|++|. +++.++++.+
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (249)
T 2ew8_A 4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNL--GRRVLTVKCDVSQPGDVEAFGKQVIS 78 (249)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhc--CCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 35699999999999999999999999999999999998 66654 33332 45688899999985 3556666667
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
.+++ +|+||||||.... .++.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||.++.. +.++..
T Consensus 79 ~~g~--id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~ 152 (249)
T 2ew8_A 79 TFGR--CDILVNNAGIYPL--IPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWL--KIEAYT 152 (249)
T ss_dssp HHSC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS--CCSSCH
T ss_pred HcCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcc--CCCCch
Confidence 7775 5599999998754 567889999999999999999999999999999888889999999999988 678899
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
.|++||+++++|+++++.|++++||+||+|+||+++|++..
T Consensus 153 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 193 (249)
T 2ew8_A 153 HYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTE 193 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccch
Confidence 99999999999999999999999999999999999999865
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-37 Score=276.83 Aligned_cols=189 Identities=21% Similarity=0.189 Sum_probs=165.1
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEe-CCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC------------
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD------------ 116 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~------------ 116 (320)
+++||+++||||++|||+++|++|+++|++|++++ |+.+++++..+++.+.. +.++..+++|++|.
T Consensus 6 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~ 84 (291)
T 1e7w_A 6 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR-PNSAITVQADLSNVATAPVSGADGSA 84 (291)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSCBCCCC----CC
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhc-CCeeEEEEeecCCccccccccccccc
Confidence 36699999999999999999999999999999999 99999988888886332 45688999999974
Q ss_pred -------cHHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCC--------------HHHHHHHHHHHhHHHHHHHHH
Q 020854 117 -------LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVD--------------QVLLKNLIKVNVEGTTKVTQA 175 (320)
Q Consensus 117 -------~~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~--------------~~~~~~~~~~N~~g~~~l~~~ 175 (320)
+++.++++.+.+++ +|+||||||+... .++.+.+ .++|++++++|+.|++++++.
T Consensus 85 ~~~~~~~v~~~~~~~~~~~g~--iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~ 160 (291)
T 1e7w_A 85 PVTLFTRCAELVAACYTHWGR--CDVLVNNASSFYP--TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKA 160 (291)
T ss_dssp CBCHHHHHHHHHHHHHHHHSC--CCEEEECCCCCCC--CCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHhcCC--CCEEEECCCCCCC--CChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHH
Confidence 24555666666765 5599999998754 5677888 899999999999999999999
Q ss_pred HhHhhhcCC------CcEEEEEcCccccccCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCC
Q 020854 176 VLPGMLKRK------KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKM 245 (320)
Q Consensus 176 ~~~~l~~~~------~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~ 245 (320)
++|.|.+++ .|+||++||.++.. +.++...|++||+++.+|+++|+.|++++||+||+|+||+++|+|
T Consensus 161 ~~~~m~~~~~~~~~~~g~Iv~isS~~~~~--~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 234 (291)
T 1e7w_A 161 FAHRVAGTPAKHRGTNYSIINMVDAMTNQ--PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD 234 (291)
T ss_dssp HHHHHHTSCGGGSCSCEEEEEECCTTTTS--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG
T ss_pred HHHHHHhcCCCCCCCCcEEEEEechhhcC--CCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc
Confidence 999998877 79999999999988 778899999999999999999999999999999999999999998
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-37 Score=270.62 Aligned_cols=209 Identities=25% Similarity=0.400 Sum_probs=170.7
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC--
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL-- 131 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-- 131 (320)
|+++||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++..+.+|++|. +.++++.+.....
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g 73 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVRNR--AAIEEMLASLPAEWC 73 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCH--HHHHHHHHTSCTTTC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cCceEEEEcCCCCH--HHHHHHHHHHHHhCC
Confidence 68999999999999999999999999999999998888777666 24588899999986 5555555543221
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHHH
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAAT 211 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~as 211 (320)
++|+||||||+... ..++.+.+.+++++++++|+.|++++++.++|+|++++.|+||++||.++.. +.++...|++|
T Consensus 74 ~iD~lvnnAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~--~~~~~~~Y~as 150 (248)
T 3asu_A 74 NIDILVNNAGLALG-MEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW--PYAGGNVYGAT 150 (248)
T ss_dssp CCCEEEECCCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS--CCTTCHHHHHH
T ss_pred CCCEEEECCCcCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhcc--CCCCCchHHHH
Confidence 47799999998632 2567889999999999999999999999999999887789999999999988 67889999999
Q ss_pred HHHHHHHHHHHHHHHccCCceEEEEecccee-cCCCccc---c--------CCCCCCCHHHHHHHHHHHhCCC
Q 020854 212 KAYIDQFSRSLYVEYRKSGIDVQCQVPLYVA-TKMASIK---R--------SSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 212 Kaal~~~~~~l~~el~~~gi~v~~v~PG~v~-T~~~~~~---~--------~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
|+++++|+++|+.|++++||+||+|+||+++ |+|.... . ......+||++|+.++..+..+
T Consensus 151 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~l~s~~ 223 (248)
T 3asu_A 151 KAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTLP 223 (248)
T ss_dssp HHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC----------------------CCBCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHHHHhccCCCCHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999 9986421 0 0112357888888888777544
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-38 Score=277.99 Aligned_cols=221 Identities=14% Similarity=0.185 Sum_probs=166.4
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
.++++||++|||||++|||+++|++|+++|++|++++|+.++.. +++ +.++..+++|++|. +++.++.+.
T Consensus 4 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~ 75 (257)
T 3tl3_A 4 SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVV---ADL-----GDRARFAAADVTDEAAVASALDLAE 75 (257)
T ss_dssp ------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHH---HHT-----CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred cceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHH---Hhc-----CCceEEEECCCCCHHHHHHHHHHHH
Confidence 46678999999999999999999999999999999999755432 222 45688999999985 234444443
Q ss_pred HHHcCCCeEEEEEccCCCCCc--cccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhc--------CCCcEEEEEcCcc
Q 020854 126 EAIEGLDVGVLINNVGISYPY--ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK--------RKKGAIVNIGSGA 195 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~--~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~--------~~~g~Iv~vsS~~ 195 (320)
+ ++ ++|+||||||..... ..+..+.+.++|++++++|+.|++++++.++|.|.+ ++.|+||++||.+
T Consensus 76 ~-~g--~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~ 152 (257)
T 3tl3_A 76 T-MG--TLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVA 152 (257)
T ss_dssp H-HS--CEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC
T ss_pred H-hC--CCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchh
Confidence 3 45 578999999986531 112235899999999999999999999999999987 5689999999999
Q ss_pred ccccCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCC-CCc
Q 020854 196 AIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGY-EPC 274 (320)
Q Consensus 196 ~~~~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~-~~~ 274 (320)
+.. +.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|+|... .+++..+.+...++. ++.
T Consensus 153 ~~~--~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~--------~~~~~~~~~~~~~~~~~r~ 222 (257)
T 3tl3_A 153 AFD--GQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLAS--------LPEEARASLGKQVPHPSRL 222 (257)
T ss_dssp --C--CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC-----------CHHHHHHHHHTSSSSCSC
T ss_pred hcC--CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhh--------ccHHHHHHHHhcCCCCCCc
Confidence 988 678889999999999999999999999999999999999999999763 122333334444444 455
Q ss_pred ccCCchHHHHHHHHh
Q 020854 275 CTPYWPHSFIWGVLS 289 (320)
Q Consensus 275 ~~~~~~~~~~~~l~~ 289 (320)
..|++....+.++++
T Consensus 223 ~~p~dva~~v~~l~s 237 (257)
T 3tl3_A 223 GNPDEYGALAVHIIE 237 (257)
T ss_dssp BCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHhc
Confidence 556666655555543
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-37 Score=274.77 Aligned_cols=191 Identities=24% Similarity=0.339 Sum_probs=167.4
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
.++++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+. + ++..+.+|++|. +++.++++.
T Consensus 24 ~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~-~~~~~~~Dv~d~~~v~~~~~~~~ 100 (276)
T 2b4q_A 24 YFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY--G-DCQAIPADLSSEAGARRLAQALG 100 (276)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTS--S-CEEECCCCTTSHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--C-ceEEEEeeCCCHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999888888777542 2 688899999985 245556666
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCC----cEEEEEcCccccccCC
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKK----GAIVNIGSGAAIVIPS 201 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~----g~Iv~vsS~~~~~~~~ 201 (320)
+.+++ +|+||||||.... .++.+.+.++|++++++|+.|++++++.++|.|++++. |+||++||.++.. +
T Consensus 101 ~~~g~--iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~--~ 174 (276)
T 2b4q_A 101 ELSAR--LDILVNNAGTSWG--AALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGIS--A 174 (276)
T ss_dssp HHCSC--CSEEEECCCCCCC--CCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTC--C
T ss_pred HhcCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcC--C
Confidence 66665 5599999998764 56788999999999999999999999999999987665 9999999999987 5
Q ss_pred CCCch-hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 202 DPLYS-VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 202 ~~~~~-~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
.++.. .|++||+|+++|+++++.|+++.||+||+|+||+++|+|..
T Consensus 175 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~ 221 (276)
T 2b4q_A 175 MGEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTR 221 (276)
T ss_dssp CCCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTH
T ss_pred CCCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchh
Confidence 67777 99999999999999999999999999999999999999865
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-37 Score=274.14 Aligned_cols=188 Identities=27% Similarity=0.328 Sum_probs=167.0
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHH--HHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK--LKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+||+++||||++|||+++|++|+++|++|++++|+.++ +++..+++.+. +.++..+++|++|. +++.++++.+.
T Consensus 1 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 78 (258)
T 3a28_C 1 MSKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA--DQKAVFVGLDVTDKANFDSAIDEAAEK 78 (258)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 37999999999999999999999999999999999887 77777777654 45688999999984 35666777777
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCC-cEEEEEcCccccccCCCCCch
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~-g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
+++ +|+||||||.... .++.+.+.++|++++++|+.|++++++.++|.|.+++. |+||++||.++.. +.++..
T Consensus 79 ~g~--iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~ 152 (258)
T 3a28_C 79 LGG--FDVLVNNAGIAQI--KPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQ--GFPILS 152 (258)
T ss_dssp HTC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTS--CCTTCH
T ss_pred hCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhcc--CCCCch
Confidence 775 5599999998754 56888999999999999999999999999999987776 9999999999987 678899
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
.|++||+++++|+++++.|++++||+||+|+||+++|+|..
T Consensus 153 ~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~ 193 (258)
T 3a28_C 153 AYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWE 193 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhh
Confidence 99999999999999999999999999999999999999854
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-37 Score=278.21 Aligned_cols=224 Identities=21% Similarity=0.240 Sum_probs=180.7
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHH-HHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKL-KDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
+++||++|||||++|||+++|++|+++|++|++++|+.++. ++..+.+.+. +.++..+.+|++|. +++.++++.+
T Consensus 44 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~ 121 (291)
T 3ijr_A 44 KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKE--GVKCVLLPGDLSDEQHCKDIVQETVR 121 (291)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT--TCCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 46799999999999999999999999999999999987654 4444444433 46788999999984 3566777777
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
.+++ +|+||||||.... ..++.+.+.++|++++++|+.|++++++.++|+|+ +.|+||++||.++.. +.++..
T Consensus 122 ~~g~--iD~lvnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~--~~g~iv~isS~~~~~--~~~~~~ 194 (291)
T 3ijr_A 122 QLGS--LNILVNNVAQQYP-QQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLK--QGDVIINTASIVAYE--GNETLI 194 (291)
T ss_dssp HHSS--CCEEEECCCCCCC-CSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCC--TTCEEEEECCTHHHH--CCTTCH
T ss_pred HcCC--CCEEEECCCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHh--hCCEEEEEechHhcC--CCCCCh
Confidence 7876 5599999998653 35678899999999999999999999999999984 368999999999988 778899
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHH
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWG 286 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~ 286 (320)
.|++||+|+++|+++++.|++++||+||+|+||+|+|++.... ..+ +..+......+.++...|++....+.+
T Consensus 195 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~------~~~-~~~~~~~~~~p~~r~~~p~dvA~~v~~ 267 (291)
T 3ijr_A 195 DYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSS------FDE-KKVSQFGSNVPMQRPGQPYELAPAYVY 267 (291)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHH------SCH-HHHHHTTTTSTTSSCBCGGGTHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCccccc------CCH-HHHHHHHccCCCCCCcCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999986431 111 222222333444466667777776666
Q ss_pred HHh
Q 020854 287 VLS 289 (320)
Q Consensus 287 l~~ 289 (320)
+++
T Consensus 268 L~s 270 (291)
T 3ijr_A 268 LAS 270 (291)
T ss_dssp HHS
T ss_pred HhC
Confidence 654
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-37 Score=270.55 Aligned_cols=210 Identities=23% Similarity=0.262 Sum_probs=180.1
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++..+.+|++|. +++.++++.+.+
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (254)
T 1hdc_A 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVTIEEDWQRVVAYAREEF 77 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 46999999999999999999999999999999999998887766555 34678899999984 355666677777
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
++ +|+||||||.... .++.+.+.++|++++++|+.|++.+++.++|.|++++.|+||++||.++.. +.++...|
T Consensus 78 g~--iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~Y 151 (254)
T 1hdc_A 78 GS--VDGLVNNAGISTG--MFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLM--GLALTSSY 151 (254)
T ss_dssp SC--CCEEEECCCCCCC--SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CCTTCHHH
T ss_pred CC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhcc--CCCCchhH
Confidence 75 5599999998754 567889999999999999999999999999999888789999999999987 67889999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc-----------cCCCCCC-CHHHHHHHHHHHhCC
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK-----------RSSFFVP-STDVYARAAMRWIGY 271 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~-----------~~~~~~~-~~~~~a~~i~~~l~~ 271 (320)
++||+++++|+++++.|++++||+|++|+||+++|++.... .+..... +|+++|+.++..+..
T Consensus 152 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~~dvA~~v~~l~s~ 226 (254)
T 1hdc_A 152 GASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSD 226 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccccchhHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCc
Confidence 99999999999999999999999999999999999975320 1112245 899999999887754
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-37 Score=273.38 Aligned_cols=187 Identities=27% Similarity=0.391 Sum_probs=166.8
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHcC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEG 130 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~ 130 (320)
||+++||||++|||++++++|+++|++|++++|+.+++++..+++... +.++..+++|++|. +++.++++.+.+++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 79 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVSDRDQVFAAVEQARKTLGG 79 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 789999999999999999999999999999999999988888888654 34688899999985 34556666666665
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccccCCCCCchhhH
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYA 209 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~ 209 (320)
+|+||||||.... .++.+.+.++|++++++|+.|++++++.++|.|.+++ .|+||++||.++.. +.++...|+
T Consensus 80 --id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~Y~ 153 (256)
T 1geg_A 80 --FDVIVNNAGVAPS--TPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV--GNPELAVYS 153 (256)
T ss_dssp --CCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS--CCTTBHHHH
T ss_pred --CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcC--CCCCchhHH
Confidence 5699999998654 5688899999999999999999999999999998876 79999999999988 678899999
Q ss_pred HHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 210 asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
+||+++++|+++++.|++++||+||+|+||+++|+|..
T Consensus 154 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~ 191 (256)
T 1geg_A 154 SSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWA 191 (256)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhh
Confidence 99999999999999999999999999999999999854
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-37 Score=277.06 Aligned_cols=191 Identities=17% Similarity=0.156 Sum_probs=163.6
Q ss_pred ccccCCCEEEEECCCC--cHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHH
Q 020854 48 NLRKYGSWALVTGPTD--GIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVER 123 (320)
Q Consensus 48 ~~~~~gk~vlITGas~--GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~ 123 (320)
.+.++||++|||||+| |||+++|++|+++|++|++++|+.+..+...+...+ .+ .+..+++|++|. +++.+++
T Consensus 25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-~~--~~~~~~~Dv~d~~~v~~~~~~ 101 (296)
T 3k31_A 25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAES-LG--VKLTVPCDVSDAESVDNMFKV 101 (296)
T ss_dssp CCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH-HT--CCEEEECCTTCHHHHHHHHHH
T ss_pred hhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHh-cC--CeEEEEcCCCCHHHHHHHHHH
Confidence 3457799999999997 999999999999999999999997655544443333 22 357899999984 3566777
Q ss_pred HHHHHcCCCeEEEEEccCCCCCc--cccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCC
Q 020854 124 IKEAIEGLDVGVLINNVGISYPY--ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS 201 (320)
Q Consensus 124 ~~~~~~~~~id~lI~nAG~~~~~--~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~ 201 (320)
+.+.+++ +|+||||||+.... ..++.+.+.++|++++++|+.|++++++.++|.|.+ .|+||++||.++.. +
T Consensus 102 ~~~~~g~--iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~IV~isS~~~~~--~ 175 (296)
T 3k31_A 102 LAEEWGS--LDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN--GGSILTLSYYGAEK--V 175 (296)
T ss_dssp HHHHHSC--CSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTS--C
T ss_pred HHHHcCC--CCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCEEEEEEehhhcc--C
Confidence 7777776 55999999987531 146778999999999999999999999999999864 79999999999988 7
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 202 DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 202 ~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++..
T Consensus 176 ~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~ 221 (296)
T 3k31_A 176 VPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASS 221 (296)
T ss_dssp CTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCC
T ss_pred CCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhh
Confidence 7889999999999999999999999999999999999999999976
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-37 Score=273.03 Aligned_cols=209 Identities=14% Similarity=0.149 Sum_probs=163.7
Q ss_pred CcccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHH
Q 020854 46 AKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVER 123 (320)
Q Consensus 46 ~~~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~ 123 (320)
...++++||++|||||++|||+++|++|+++|++|++++|+.++..+..+ +. .+..+.+|++|. +++.+++
T Consensus 20 ~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~---~~----~~~~~~~Dv~~~~~v~~~~~~ 92 (260)
T 3gem_A 20 QGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELR---QA----GAVALYGDFSCETGIMAFIDL 92 (260)
T ss_dssp -------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHH---HH----TCEEEECCTTSHHHHHHHHHH
T ss_pred ccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH---hc----CCeEEECCCCCHHHHHHHHHH
Confidence 45667889999999999999999999999999999999999876543332 22 267889999985 3556666
Q ss_pred HHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCC
Q 020854 124 IKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP 203 (320)
Q Consensus 124 ~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~ 203 (320)
+.+.+++ +|+||||||.... .. .+.+.++|++++++|+.|++++++.++|+|.+++.|+||++||.++.. +.+
T Consensus 93 ~~~~~g~--iD~lv~nAg~~~~--~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~--~~~ 165 (260)
T 3gem_A 93 LKTQTSS--LRAVVHNASEWLA--ET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRK--GSS 165 (260)
T ss_dssp HHHHCSC--CSEEEECCCCCCC--CC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGT--CCS
T ss_pred HHHhcCC--CCEEEECCCccCC--CC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcC--CCC
Confidence 6666675 5599999998754 22 567789999999999999999999999999988889999999999988 778
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc---------ccCCCCCCCHHHHHHHHHHHh
Q 020854 204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI---------KRSSFFVPSTDVYARAAMRWI 269 (320)
Q Consensus 204 ~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~---------~~~~~~~~~~~~~a~~i~~~l 269 (320)
+...|++||+|+++|+++++.|+++ +|+||+|+||+++|++... ..+.....+||++|+.++..+
T Consensus 166 ~~~~Y~asKaa~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~~~~~~~~~~~~~p~~r~~~~edva~~v~~L~ 239 (260)
T 3gem_A 166 KHIAYCATKAGLESLTLSFAARFAP-LVKVNGIAPALLMFQPKDDAAYRANALAKSALGIEPGAEVIYQSLRYLL 239 (260)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECTTCC---------------CCSCCCCCTHHHHHHHHHHH
T ss_pred CcHhHHHHHHHHHHHHHHHHHHHCC-CCEEEEEeecccccCCCCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Confidence 8999999999999999999999988 7999999999999997542 111122345666666666554
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-38 Score=278.06 Aligned_cols=224 Identities=21% Similarity=0.220 Sum_probs=177.4
Q ss_pred cccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHH
Q 020854 47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERI 124 (320)
Q Consensus 47 ~~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~ 124 (320)
...+++||++|||||++|||+++|++|+++|++|++++|+.+.. ......+.+|++|. +++.++++
T Consensus 8 ~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~ 75 (269)
T 3vtz_A 8 HMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD------------VNVSDHFKIDVTNEEEVKEAVEKT 75 (269)
T ss_dssp --CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C------------TTSSEEEECCTTCHHHHHHHHHHH
T ss_pred cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc------------cCceeEEEecCCCHHHHHHHHHHH
Confidence 34457799999999999999999999999999999999987653 12456789999985 35666777
Q ss_pred HHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCC
Q 020854 125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL 204 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~ 204 (320)
.+.+++ +|+||||||+... .++.+.+.++|++++++|+.|++.++++++|.|.+++.|+||++||.++.. +.++
T Consensus 76 ~~~~g~--iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~ 149 (269)
T 3vtz_A 76 TKKYGR--IDILVNNAGIEQY--SPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYA--ATKN 149 (269)
T ss_dssp HHHHSC--CCEEEECCCCCCC--CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--BCTT
T ss_pred HHHcCC--CCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhcc--CCCC
Confidence 777775 5599999998764 678899999999999999999999999999999988899999999999988 6788
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccC---CCCCCCHHHHHHHHHHHhCCCCcccCCchH
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRS---SFFVPSTDVYARAAMRWIGYEPCCTPYWPH 281 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~---~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~ 281 (320)
...|++||+|+++|+++++.|+++ ||+||+|+||+|+|+|...... .......++..+......+.++...|++..
T Consensus 150 ~~~Y~asKaa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA 228 (269)
T 3vtz_A 150 AAAYVTSKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVA 228 (269)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHHHH
Confidence 999999999999999999999988 8999999999999998642100 000011133334444445555666666666
Q ss_pred HHHHHHHh
Q 020854 282 SFIWGVLS 289 (320)
Q Consensus 282 ~~~~~l~~ 289 (320)
..+.++++
T Consensus 229 ~~v~~L~s 236 (269)
T 3vtz_A 229 EVVAFLAS 236 (269)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHhC
Confidence 66655554
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-37 Score=267.63 Aligned_cols=206 Identities=20% Similarity=0.248 Sum_probs=171.6
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCe
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV 133 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 133 (320)
|++|||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++..+.+|++|. +.++++.+.+... +
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~--~~v~~~~~~~~~~-~ 73 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL-----SNNVGYRARDLASH--QEVEQLFEQLDSI-P 73 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC-----SSCCCEEECCTTCH--HHHHHHHHSCSSC-C
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-----hhccCeEeecCCCH--HHHHHHHHHHhhc-C
Confidence 68999999999999999999999999999999999888776655 45678899999986 6677777666543 3
Q ss_pred EEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHHHHH
Q 020854 134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKA 213 (320)
Q Consensus 134 d~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKa 213 (320)
|+||||||.... .++.+.+.+++++++++|+.|++++++.++|.|.+++ ++||++||.++.. +.++...|++||+
T Consensus 74 d~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~--~~~~~~~Y~asKa 148 (230)
T 3guy_A 74 STVVHSAGSGYF--GLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP-VNVVMIMSTAAQQ--PKAQESTYCAVKW 148 (230)
T ss_dssp SEEEECCCCCCC--SCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-CEEEEECCGGGTS--CCTTCHHHHHHHH
T ss_pred CEEEEeCCcCCC--CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEeecccCC--CCCCCchhHHHHH
Confidence 799999998764 6788999999999999999999999999999997764 4999999999988 7788999999999
Q ss_pred HHHHHHHHHHHHHccCCceEEEEeccceecCCCccc---cCCCCCCCHHHHHHHHHHHhCCC
Q 020854 214 YIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK---RSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 214 al~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~---~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
|+++|+++|+.|++++||+|++|+||+++|++.... .+.....+||++|+.++..+..+
T Consensus 149 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~dvA~~i~~l~~~~ 210 (230)
T 3guy_A 149 AVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSGKSLDTSSFMSAEDAALMIHGALANI 210 (230)
T ss_dssp HHHHHHHHHHHHTTTSSCEEEEEEECCC----------------CCCHHHHHHHHHHHCCEE
T ss_pred HHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcCCCCCcccCCCHHHHHHHHHHHHhCc
Confidence 999999999999999999999999999999997742 22345689999999999988644
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=265.02 Aligned_cols=212 Identities=22% Similarity=0.253 Sum_probs=181.7
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHc
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIE 129 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~ 129 (320)
++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++.++++|++|. +++.++++.+.++
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQ-GVEVFYHHLDVSKAESVEEFSKKVLERFG 79 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence 37999999999999999999999999999999999999999988886443 56789999999985 3455566677777
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhH
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA 209 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~ 209 (320)
+ +|+||||||.... .++.+.+.+++++++++|+.|++++++.++|+|. ++.+++|++||..+.. +.++...|+
T Consensus 80 ~--id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~ii~~sS~~~~~--~~~~~~~Y~ 152 (235)
T 3l77_A 80 D--VDVVVANAGLGYF--KRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLK-RTGGLALVTTSDVSAR--LIPYGGGYV 152 (235)
T ss_dssp S--CSEEEECCCCCCC--CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEECCGGGSS--CCTTCHHHH
T ss_pred C--CCEEEECCccccc--cCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCcEEEEecchhcc--cCCCcchHH
Confidence 5 5599999998764 6788999999999999999999999999999994 4578999999999987 678889999
Q ss_pred HHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCC---CCCCCHHHHHHHHHHHhCCCC
Q 020854 210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSS---FFVPSTDVYARAAMRWIGYEP 273 (320)
Q Consensus 210 asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~---~~~~~~~~~a~~i~~~l~~~~ 273 (320)
+||+|+++|+++++ +...||+|++|+||+++|+|....... ....+||++|+.++..+..+.
T Consensus 153 ~sKaa~~~~~~~l~--~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~p~dva~~v~~l~~~~~ 217 (235)
T 3l77_A 153 STKWAARALVRTFQ--IENPDVRFFELRPGAVDTYFGGSKPGKPKEKGYLKPDEIAEAVRCLLKLPK 217 (235)
T ss_dssp HHHHHHHHHHHHHH--HHCTTSEEEEEEECSBSSSTTTCCSCCCGGGTCBCHHHHHHHHHHHHTSCT
T ss_pred HHHHHHHHHHHHHh--hcCCCeEEEEEeCCccccccccccCCcccccCCCCHHHHHHHHHHHHcCCC
Confidence 99999999999994 447899999999999999998742221 235799999999999987763
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=274.63 Aligned_cols=191 Identities=28% Similarity=0.410 Sum_probs=168.6
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcC-CceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYA-KTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+. ..++..+.+|++|. +++.++++.+
T Consensus 23 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 102 (297)
T 1xhl_A 23 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA 102 (297)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 46799999999999999999999999999999999999999888888866421 12688999999985 3556667777
Q ss_pred HHcCCCeEEEEEccCCCCCcccc--ccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCC-C
Q 020854 127 AIEGLDVGVLINNVGISYPYARF--FHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD-P 203 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~-~ 203 (320)
.+++ +|+||||||.... .+ +.+.+.++|++++++|+.|++.+++.++|.|.+++ |+||++||.++.. +. +
T Consensus 103 ~~g~--iD~lvnnAG~~~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~--~~~~ 175 (297)
T 1xhl_A 103 KFGK--IDILVNNAGANLA--DGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGP--QAHS 175 (297)
T ss_dssp HHSC--CCEEEECCCCCCC--CSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSS--SCCT
T ss_pred hcCC--CCEEEECCCcCcC--CCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhcc--CCCC
Confidence 7775 5599999998754 44 78899999999999999999999999999998776 9999999999987 55 7
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 204 ~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
+...|++||+|+++|+++++.|++++||+||+|+||+++|+|..
T Consensus 176 ~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~ 219 (297)
T 1xhl_A 176 GYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMG 219 (297)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHH
T ss_pred CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCcccc
Confidence 88999999999999999999999999999999999999999864
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=276.30 Aligned_cols=214 Identities=25% Similarity=0.300 Sum_probs=182.2
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEe-CCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+.+|+++||||++|||+++|++|+++|++|++++ |+.+..++..+++... +.++.++.+|++|. +++.++++.+.
T Consensus 23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 100 (269)
T 3gk3_A 23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDA--GRDFKAYAVDVADFESCERCAEKVLAD 100 (269)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTT--TCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 5699999999999999999999999999999998 6666666666666543 45788999999984 35667777777
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
+++ +|+||||||.... .++.+.+.+++++++++|+.|++++++.++|.|.+++.|+||++||.++.. +.++.+.
T Consensus 101 ~g~--id~li~nAg~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~ 174 (269)
T 3gk3_A 101 FGK--VDVLINNAGITRD--ATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSR--GAFGQAN 174 (269)
T ss_dssp HSC--CSEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH--CCTTBHH
T ss_pred cCC--CCEEEECCCcCCC--cchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhcc--CCCCcch
Confidence 776 5599999998765 568889999999999999999999999999999988889999999999988 7788999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc------------cCCCCCCCHHHHHHHHHHHhCCC
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK------------RSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~------------~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
|++||+|+++|+++++.|++++||+|++|+||+++|+|.... .+.....+|+++|+.++..+...
T Consensus 175 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~ 251 (269)
T 3gk3_A 175 YASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLEAKILPQIPVGRLGRPDEVAALIAFLCSDD 251 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-------CCSGGGCTTSSCBCHHHHHHHHHHHTSTT
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHHHHHhhhcCCcCCccCHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999999999999997631 11122447888888888776543
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-37 Score=269.78 Aligned_cols=225 Identities=23% Similarity=0.288 Sum_probs=181.7
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEE-eCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
++||+++||||++|||+++|++|+++|++|+++ +|+.++.++..+++.+. +.++..+.+|++|. ++..++++.+.
T Consensus 5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (255)
T 3icc_A 5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN--GGSAFSIGANLESLHGVEALYSSLDNE 82 (255)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhc--CCceEEEecCcCCHHHHHHHHHHHHHH
Confidence 569999999999999999999999999999885 77888888888888765 45788999999984 34555555555
Q ss_pred HcC----CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCC
Q 020854 128 IEG----LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP 203 (320)
Q Consensus 128 ~~~----~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~ 203 (320)
++. .++|+||||||.... .++.+.+.+++++++++|+.|++++++.++|.|. +.|+||++||.++.. +.+
T Consensus 83 ~~~~~~~~~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~~~iv~isS~~~~~--~~~ 156 (255)
T 3icc_A 83 LQNRTGSTKFDILINNAGIGPG--AFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLR--DNSRIINISSAATRI--SLP 156 (255)
T ss_dssp HHHHHSSSCEEEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEE--EEEEEEEECCGGGTS--CCT
T ss_pred hcccccCCcccEEEECCCCCCC--CChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhC--CCCEEEEeCChhhcc--CCC
Confidence 543 358899999998754 6688899999999999999999999999999983 468999999999988 788
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHH
Q 020854 204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSF 283 (320)
Q Consensus 204 ~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~ 283 (320)
+...|++||+|+++|+++++.|++++||+|++|+||+++|+|.... ...+...+......+.++...|++....
T Consensus 157 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~dva~~ 230 (255)
T 3icc_A 157 DFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAEL------LSDPMMKQYATTISAFNRLGEVEDIADT 230 (255)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTT------TTSHHHHHHHHHTSTTSSCBCHHHHHHH
T ss_pred CcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhh------cccHHHHHhhhccCCcCCCCCHHHHHHH
Confidence 8999999999999999999999999999999999999999997642 1122233333333344455555666655
Q ss_pred HHHHHh
Q 020854 284 IWGVLS 289 (320)
Q Consensus 284 ~~~l~~ 289 (320)
+.++++
T Consensus 231 ~~~l~s 236 (255)
T 3icc_A 231 AAFLAS 236 (255)
T ss_dssp HHHHHS
T ss_pred HHHHhC
Confidence 555543
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-37 Score=274.77 Aligned_cols=232 Identities=26% Similarity=0.325 Sum_probs=186.6
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+. +.++..+.+|++|. +++.++++.+.
T Consensus 19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 96 (277)
T 2rhc_B 19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTCDVRSVPEIEALVAAVVER 96 (277)
T ss_dssp CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 467999999999999999999999999999999999999988888888664 34688899999985 34556666666
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHh--hhcCCCcEEEEEcCccccccCCCCCc
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPG--MLKRKKGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~--l~~~~~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
+++ +|+||||||.... .++.+.+.++|++++++|+.|++++++.++|. |.+++.|+||++||.++.. +.++.
T Consensus 97 ~g~--iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~--~~~~~ 170 (277)
T 2rhc_B 97 YGP--VDVLVNNAGRPGG--GATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQ--GVVHA 170 (277)
T ss_dssp TCS--CSEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTS--CCTTC
T ss_pred hCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECcccccc--CCCCC
Confidence 665 5599999998754 56788999999999999999999999999999 8877789999999999987 67888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccC---CCCCCCHHHHHHHHHHHhCCCCcccCCchHH
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRS---SFFVPSTDVYARAAMRWIGYEPCCTPYWPHS 282 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~---~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~ 282 (320)
..|++||+++++|+++++.|+++.||+||+|+||+++|++...... .....+.++..+.+....+.++...|.+...
T Consensus 171 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~ 250 (277)
T 2rhc_B 171 APYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAE 250 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 9999999999999999999999999999999999999998542100 0000111222333344444556666777776
Q ss_pred HHHHHHh
Q 020854 283 FIWGVLS 289 (320)
Q Consensus 283 ~~~~l~~ 289 (320)
.+.++++
T Consensus 251 ~v~~l~s 257 (277)
T 2rhc_B 251 MVAYLIG 257 (277)
T ss_dssp HHHHHHS
T ss_pred HHHHHhC
Confidence 6666553
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-38 Score=277.31 Aligned_cols=220 Identities=21% Similarity=0.208 Sum_probs=179.8
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||++|||||++|||+++|++|+++|++|++++|+.+.++ ....+.+|++|. +++.++++.+.
T Consensus 25 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~-------------~~~~~~~Dv~~~~~~~~~~~~~~~~ 91 (266)
T 3uxy_A 25 GFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA-------------ADLHLPGDLREAAYADGLPGAVAAG 91 (266)
T ss_dssp -CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC-------------CSEECCCCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-------------hhhccCcCCCCHHHHHHHHHHHHHh
Confidence 467999999999999999999999999999999999876532 123457899874 35566777777
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
+++ +|+||||||.... .++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++.. +.++...
T Consensus 92 ~g~--iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~--~~~~~~~ 165 (266)
T 3uxy_A 92 LGR--LDIVVNNAGVISR--GRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLR--PGPGHAL 165 (266)
T ss_dssp HSC--CCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTB--CCTTBHH
T ss_pred cCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC--CCCCChH
Confidence 776 5599999999765 678899999999999999999999999999999988899999999999988 7788999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHH
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGV 287 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l 287 (320)
|++||+|+++|+++++.|++++||+||+|+||+++|+|....... ....+++..+.+....+.++...|++....+.++
T Consensus 166 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L 244 (266)
T 3uxy_A 166 YCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAK-RGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFL 244 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHH-TTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhc-ccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999986531111 1123445555555555555666677777666665
Q ss_pred Hh
Q 020854 288 LS 289 (320)
Q Consensus 288 ~~ 289 (320)
++
T Consensus 245 ~s 246 (266)
T 3uxy_A 245 AS 246 (266)
T ss_dssp HS
T ss_pred hC
Confidence 54
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-36 Score=267.74 Aligned_cols=211 Identities=23% Similarity=0.252 Sum_probs=181.3
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||+++||||++|||++++++|+++|++|++++|+.+++++..+++. ..+..+.+|++|. +++.++++.+.
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~ 78 (260)
T 1nff_A 4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA-----DAARYVHLDVTQPAQWKAAVDTAVTA 78 (260)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG-----GGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-----cCceEEEecCCCHHHHHHHHHHHHHH
Confidence 3569999999999999999999999999999999999988877766653 2478899999984 35566777777
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
+++ +|+||||||.... .++.+.+.+++++++++|+.|++++++.++|.|++++.|+||++||.++.. +.++...
T Consensus 79 ~g~--iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~ 152 (260)
T 1nff_A 79 FGG--LHVLVNNAGILNI--GTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLA--GTVACHG 152 (260)
T ss_dssp HSC--CCEEEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CCTTBHH
T ss_pred cCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcC--CCCCchh
Confidence 775 5599999998754 567889999999999999999999999999999887889999999999988 6788899
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc------cCCCCCCCHHHHHHHHHHHhCC
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK------RSSFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~------~~~~~~~~~~~~a~~i~~~l~~ 271 (320)
|++||+++++++++++.|++++||+|++|+||+++|++.... .+.....+|+++|+.++..+..
T Consensus 153 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~ 222 (260)
T 1nff_A 153 YTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPEDIFQTALGRAAEPVEVSNLVVYLASD 222 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTTCSCCSSSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccccchhhHHhCccCCCCCHHHHHHHHHHHhCc
Confidence 999999999999999999999999999999999999986411 1222356899999999887753
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=271.65 Aligned_cols=190 Identities=28% Similarity=0.433 Sum_probs=166.9
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcC-CceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYA-KTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+. ..++..+.+|++|. +++.++++.+.
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (280)
T 1xkq_A 4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ 83 (280)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence 5699999999999999999999999999999999999999888888865421 12688999999985 35566777777
Q ss_pred HcCCCeEEEEEccCCCCCcccc----ccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCC-
Q 020854 128 IEGLDVGVLINNVGISYPYARF----FHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD- 202 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~----~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~- 202 (320)
+++ +|+||||||.... .+ +.+.+.+++++++++|+.|++.+++.++|.|.+++ |+||++||.++.. +.
T Consensus 84 ~g~--iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~--~~~ 156 (280)
T 1xkq_A 84 FGK--IDVLVNNAGAAIP--DAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGP--QAQ 156 (280)
T ss_dssp HSC--CCEEEECCCCCCC--CTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSS--SCC
T ss_pred cCC--CCEEEECCCCCCC--CCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccC--CCC
Confidence 775 5599999998654 44 77889999999999999999999999999998765 9999999999987 55
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 203 ~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
++...|++||+|+++|+++++.|++++||+||+|+||+++|++..
T Consensus 157 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~ 201 (280)
T 1xkq_A 157 PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTN 201 (280)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCccc
Confidence 788999999999999999999999999999999999999999864
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-36 Score=272.60 Aligned_cols=224 Identities=16% Similarity=0.097 Sum_probs=172.2
Q ss_pred ccCCCEEEEECCC--CcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHH
Q 020854 50 RKYGSWALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 50 ~~~gk~vlITGas--~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
.++||++|||||+ +|||+++|++|+++|++|++++|+.+..+ ..+++.+..+ ++.++.+|++|. +++.++++.
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~ 104 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKK-RVEPLAEELG--AFVAGHCDVADAASIDAVFETLE 104 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHH-HHHHHHHHHT--CEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHHHHHhcC--CceEEECCCCCHHHHHHHHHHHH
Confidence 4679999999999 55999999999999999999999965433 3444444432 478899999985 356667777
Q ss_pred HHHcCCCeEEEEEccCCCCCc--cccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCC
Q 020854 126 EAIEGLDVGVLINNVGISYPY--ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP 203 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~--~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~ 203 (320)
+.+++ +|+||||||+.... ..++.+.+.++|++++++|+.|++++++.++|.|.+ .|+||++||.++.. +.+
T Consensus 105 ~~~g~--iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~--~~~ 178 (293)
T 3grk_A 105 KKWGK--LDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD--GGSILTLTYYGAEK--VMP 178 (293)
T ss_dssp HHTSC--CSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT--CEEEEEEECGGGTS--BCT
T ss_pred HhcCC--CCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCEEEEEeehhhcc--CCC
Confidence 77775 55999999987520 256788999999999999999999999999999964 79999999999988 678
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHH
Q 020854 204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSF 283 (320)
Q Consensus 204 ~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~ 283 (320)
+...|++||+|+++|+++|+.|++++||+||+|+||+|+|++.... ...++..+......+.++...|++.+..
T Consensus 179 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~------~~~~~~~~~~~~~~p~~r~~~pedvA~~ 252 (293)
T 3grk_A 179 NYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGI------GDFRYILKWNEYNAPLRRTVTIDEVGDV 252 (293)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------------CCHHHHHHHHHHHSTTSSCCCHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcc------cchHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence 8999999999999999999999999999999999999999987531 1223333333444444444455555554
Q ss_pred HHHHH
Q 020854 284 IWGVL 288 (320)
Q Consensus 284 ~~~l~ 288 (320)
+.+++
T Consensus 253 v~~L~ 257 (293)
T 3grk_A 253 GLYFL 257 (293)
T ss_dssp HHHHH
T ss_pred HHHHc
Confidence 44443
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-36 Score=267.09 Aligned_cols=227 Identities=16% Similarity=0.118 Sum_probs=177.9
Q ss_pred cccCCCEEEEECCC--CcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHH
Q 020854 49 LRKYGSWALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERI 124 (320)
Q Consensus 49 ~~~~gk~vlITGas--~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~ 124 (320)
++++||+++||||+ +|||+++|++|+++|++|++++|+....+.. +++.+..+..++..+.+|++|. +++.++++
T Consensus 3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 81 (266)
T 3oig_A 3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSV-HELAGTLDRNDSIILPCDVTNDAEIETCFASI 81 (266)
T ss_dssp SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHHHTSSSCCCEEEECCCSSSHHHHHHHHHH
T ss_pred cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHH-HHHHHhcCCCCceEEeCCCCCHHHHHHHHHHH
Confidence 45779999999999 6799999999999999999999997554444 4444444445789999999986 35566777
Q ss_pred HHHHcCCCeEEEEEccCCCCCc--cccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCC
Q 020854 125 KEAIEGLDVGVLINNVGISYPY--ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD 202 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~~~~~--~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~ 202 (320)
.+.+++ +|+||||||...+. ..++.+.+.+++++++++|+.+++.+++.++|+|+ +.|+||++||.++.. +.
T Consensus 82 ~~~~g~--id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~g~iv~isS~~~~~--~~ 155 (266)
T 3oig_A 82 KEQVGV--IHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMT--EGGSIVTLTYLGGEL--VM 155 (266)
T ss_dssp HHHHSC--CCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCT--TCEEEEEEECGGGTS--CC
T ss_pred HHHhCC--eeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcC--CCceEEEEecccccc--cC
Confidence 777775 55999999987521 25677899999999999999999999999999985 369999999999998 77
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHH
Q 020854 203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHS 282 (320)
Q Consensus 203 ~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~ 282 (320)
++...|++||+|+++|+++|+.|++++||+|++|+||+|+|++.... ...++..+.+....+.++...|.+...
T Consensus 156 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~------~~~~~~~~~~~~~~~~~~~~~p~dva~ 229 (266)
T 3oig_A 156 PNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGI------SDFNSILKDIEERAPLRRTTTPEEVGD 229 (266)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTC------TTHHHHHHHHHHHSTTSSCCCHHHHHH
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccc------cchHHHHHHHHhcCCCCCCCCHHHHHH
Confidence 88999999999999999999999999999999999999999987641 112233333333334444444444444
Q ss_pred HHHHHH
Q 020854 283 FIWGVL 288 (320)
Q Consensus 283 ~~~~l~ 288 (320)
.+.+++
T Consensus 230 ~v~~l~ 235 (266)
T 3oig_A 230 TAAFLF 235 (266)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 444433
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=279.74 Aligned_cols=217 Identities=22% Similarity=0.280 Sum_probs=186.0
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHH-------HHHHHHHHHhhcCCceEEEEEEeCCCC--cHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK-------LKDVSDSIQAKYAKTQIKSVVVDFSGD--LDE 119 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~ 119 (320)
.+++||++|||||++|||+++|++|+++|++|++++|+.++ +++..+++.+. +.++..+.+|++|. +++
T Consensus 41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~ 118 (346)
T 3kvo_A 41 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV--GGKALPCIVDVRDEQQISA 118 (346)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHT--TCEEEEEECCTTCHHHHHH
T ss_pred CCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHH
Confidence 45789999999999999999999999999999999999764 56667777654 56789999999985 356
Q ss_pred HHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccccc
Q 020854 120 GVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI 199 (320)
Q Consensus 120 ~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~ 199 (320)
.++++.+.+++ +|+||||||+... .++.+.+.++|++++++|+.|++++++.++|+|++++.|+||++||..+..+
T Consensus 119 ~~~~~~~~~g~--iDilVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~ 194 (346)
T 3kvo_A 119 AVEKAIKKFGG--IDILVNNASAISL--TNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNP 194 (346)
T ss_dssp HHHHHHHHHSC--CCEEEECCCCCCC--CCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCG
T ss_pred HHHHHHHHcCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCC
Confidence 67777777775 5599999998764 6788999999999999999999999999999999888899999999999873
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccc-eecCCCcc---ccCCCCCCCHHHHHHHHHHHhCCC
Q 020854 200 PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLY-VATKMASI---KRSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 200 ~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~-v~T~~~~~---~~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
.+.++...|++||+|+.+|+++|+.|++ .||+||+|+||+ ++|++.+. ..+.....+||++|+.++..+...
T Consensus 195 ~~~~~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~ 270 (346)
T 3kvo_A 195 VWFKQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDMLGGPGIESQCRKVDIIADAAYSIFQKP 270 (346)
T ss_dssp GGTSSSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHHHHCC--CGGGCBCTHHHHHHHHHHHTSC
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHHhhccccccccCCCHHHHHHHHHHHHhcC
Confidence 2267889999999999999999999999 999999999995 99988653 222234679999999999988653
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-36 Score=271.31 Aligned_cols=241 Identities=20% Similarity=0.194 Sum_probs=197.5
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
.++||+++|||||||||++++++|+++|++|++++|+.+++++..+++.+.+ ..++..+.+|++|. +++.++++.+.
T Consensus 25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 103 (286)
T 1xu9_A 25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG-AASAHYIAGTMEDMTFAEQFVAQAGKL 103 (286)
T ss_dssp GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT-CSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC-CCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence 3679999999999999999999999999999999999999988888887653 34788999999984 34555666666
Q ss_pred HcCCCeEEEEEc-cCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 128 IEGLDVGVLINN-VGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 128 ~~~~~id~lI~n-AG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
+++ +|+|||| ||... ..+.+.+.+++++++++|+.|++.+++.++|.|.++ .|+||++||.++.. +.++..
T Consensus 104 ~g~--iD~li~naag~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~ 175 (286)
T 1xu9_A 104 MGG--LDMLILNHITNTS---LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKV--AYPMVA 175 (286)
T ss_dssp HTS--CSEEEECCCCCCC---CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTS--CCTTCH
T ss_pred cCC--CCEEEECCccCCC---CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCccccc--CCCCcc
Confidence 775 5599999 56543 234567899999999999999999999999998754 58999999999987 678899
Q ss_pred hhHHHHHHHHHHHHHHHHHH--ccCCceEEEEeccceecCCCccc---cCCCCCCCHHHHHHHHHHHhCCC-CcccCCch
Q 020854 207 VYAATKAYIDQFSRSLYVEY--RKSGIDVQCQVPLYVATKMASIK---RSSFFVPSTDVYARAAMRWIGYE-PCCTPYWP 280 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el--~~~gi~v~~v~PG~v~T~~~~~~---~~~~~~~~~~~~a~~i~~~l~~~-~~~~~~~~ 280 (320)
.|++||+++++++++++.|+ ...||+|++|+||+++|++.... .......+||++|+.++..+..+ +.....+.
T Consensus 176 ~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~vA~~i~~~~~~~~~~~~~~~~ 255 (286)
T 1xu9_A 176 AYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGALRQEEVYYDSS 255 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGGGGGGCBCHHHHHHHHHHHHHTTCSEEEECSC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhccccccCCCCCHHHHHHHHHHHHhcCCceEEeccH
Confidence 99999999999999999999 67899999999999999986421 11234579999999999999766 33443456
Q ss_pred HHHHHHHHhhchHHHHHHHH
Q 020854 281 HSFIWGVLSILPEKLIDAGR 300 (320)
Q Consensus 281 ~~~~~~l~~~~P~~~~~~~~ 300 (320)
..+..++.+++|.++ +++.
T Consensus 256 ~~~~~~~~~~~P~~~-~~~~ 274 (286)
T 1xu9_A 256 LWTTLLIRNPSRKIL-EFLY 274 (286)
T ss_dssp HHHHHHSCCHHHHHH-HHHH
T ss_pred HHHHHHHHHHChHHH-HHHH
Confidence 667777778889654 4443
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-36 Score=276.80 Aligned_cols=188 Identities=21% Similarity=0.191 Sum_probs=165.0
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEe-CCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC-------------
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD------------- 116 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~------------- 116 (320)
++||++|||||++|||+++|++|+++|++|++++ |+.+++++..+++.... +.++..+.+|++|.
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 122 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR-PNSAITVQADLSNVATAPVSGADGSAP 122 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSCBCC-------CC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc-CCeEEEEEeeCCCchhccccccccccc
Confidence 7799999999999999999999999999999999 99999988888886333 45688999999974
Q ss_pred ------cHHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCC--------------HHHHHHHHHHHhHHHHHHHHHH
Q 020854 117 ------LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVD--------------QVLLKNLIKVNVEGTTKVTQAV 176 (320)
Q Consensus 117 ------~~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~--------------~~~~~~~~~~N~~g~~~l~~~~ 176 (320)
+++.++++.+.+++ +|+||||||+... .++.+.+ .++|++++++|+.|++.+++.+
T Consensus 123 ~~~~~~v~~~~~~~~~~~g~--iD~lVnnAG~~~~--~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~ 198 (328)
T 2qhx_A 123 VTLFTRCAELVAACYTHWGR--CDVLVNNASSFYP--TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAF 198 (328)
T ss_dssp BCHHHHHHHHHHHHHHHHSC--CCEEEECCCCCCC--CCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhcCC--CCEEEECCCCCCC--CChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 24555666667775 5599999998754 5677777 8999999999999999999999
Q ss_pred hHhhhcCC------CcEEEEEcCccccccCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCC
Q 020854 177 LPGMLKRK------KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKM 245 (320)
Q Consensus 177 ~~~l~~~~------~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~ 245 (320)
+|.|.+++ .|+||++||.++.. +.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++
T Consensus 199 ~~~m~~~~~~~~~~~g~IV~isS~~~~~--~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~ 271 (328)
T 2qhx_A 199 AHRVAGTPAKHRGTNYSIINMVDAMTNQ--PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD 271 (328)
T ss_dssp HHHHHHSCGGGSCSCEEEEEECCTTTTS--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC
T ss_pred HHHHHhcCCcCCCCCcEEEEECchhhcc--CCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc
Confidence 99998877 79999999999988 678899999999999999999999999999999999999999998
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-37 Score=270.20 Aligned_cols=218 Identities=20% Similarity=0.225 Sum_probs=173.1
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHH-HHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK-LKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
+++.+|+++||||++|||+++|++|+++|++|++++|+.++ .+...+.+.+. +.++.++.+|++|. +++.++++.
T Consensus 3 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~ 80 (264)
T 3i4f_A 3 LGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDV--EERLQFVQADVTKKEDLHKIVEEAM 80 (264)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGG--GGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred cccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHH
Confidence 44568999999999999999999999999999999776554 44444443332 45789999999985 355666777
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCc
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
+.+++ +|+||||||.......++.+.+.+++++++++|+.|++.+++.++|.|++++.|+||++||..+...++.++.
T Consensus 81 ~~~g~--id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 158 (264)
T 3i4f_A 81 SHFGK--IDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYR 158 (264)
T ss_dssp HHHSC--CCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTC
T ss_pred HHhCC--CCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCC
Confidence 77775 5599999995333346788899999999999999999999999999999888899999999844322266788
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc-----------cCCCCCCCHHHHHHHHHHHhC
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK-----------RSSFFVPSTDVYARAAMRWIG 270 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~-----------~~~~~~~~~~~~a~~i~~~l~ 270 (320)
+.|++||+|+++|+++|+.|++++||+|++|+||+++|++.... .+.....+||++|+.++..+.
T Consensus 159 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s 234 (264)
T 3i4f_A 159 SAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQLKEHNTPIGRSGTGEDIARTISFLCE 234 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHHHHC--------CCCCHHHHHHHHHHHHS
T ss_pred chhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999997631 112224567777777766654
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-37 Score=277.29 Aligned_cols=188 Identities=26% Similarity=0.277 Sum_probs=163.8
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCC--HHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN--PDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~--~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
+++||++|||||++|||+++|++|+++|++|++++|+ .+..++..+.+.+. +.++..+.+|++|. +++.++++.
T Consensus 46 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~ 123 (294)
T 3r3s_A 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEEC--GRKAVLLPGDLSDESFARSLVHKAR 123 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHT--TCCEEECCCCTTSHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHc--CCcEEEEEecCCCHHHHHHHHHHHH
Confidence 4679999999999999999999999999999999987 34455666655543 45788999999984 356667777
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCc
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
+.+++ +|+||||||.... ..++.+.+.++|++++++|+.|++++++.++|.|.+ .|+||++||.++.. +.++.
T Consensus 124 ~~~g~--iD~lv~nAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~Iv~isS~~~~~--~~~~~ 196 (294)
T 3r3s_A 124 EALGG--LDILALVAGKQTA-IPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK--GASIITTSSIQAYQ--PSPHL 196 (294)
T ss_dssp HHHTC--CCEEEECCCCCCC-CSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT--TCEEEEECCGGGTS--CCTTC
T ss_pred HHcCC--CCEEEECCCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECChhhcc--CCCCc
Confidence 77775 5599999998653 356889999999999999999999999999999853 58999999999998 77889
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCC
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMA 246 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~ 246 (320)
..|++||+|+++|+++|+.|++++||+||+|+||+|+|++.
T Consensus 197 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~ 237 (294)
T 3r3s_A 197 LDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQ 237 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccc
Confidence 99999999999999999999999999999999999999983
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-36 Score=275.17 Aligned_cols=216 Identities=21% Similarity=0.276 Sum_probs=175.1
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCC-----HHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-----PDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVE 122 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~ 122 (320)
++.+|+++|||||+|||+++|++|+++|++|++++|+ .++++++.+.+... +.++..+.+|++|. +++.++
T Consensus 2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~--~~~~~~~~~Dvtd~~~v~~~~~ 79 (324)
T 3u9l_A 2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDN--DVDLRTLELDVQSQVSVDRAID 79 (324)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHH--TCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHH
Confidence 3568999999999999999999999999999988775 55666666666554 45789999999985 356667
Q ss_pred HHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCC
Q 020854 123 RIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD 202 (320)
Q Consensus 123 ~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~ 202 (320)
++.+.+++ +|+||||||+... +++++.+.+++++++++|+.|+++++++++|+|++++.|+||++||.++... +.
T Consensus 80 ~~~~~~g~--iD~lVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~-~~ 154 (324)
T 3u9l_A 80 QIIGEDGR--IDVLIHNAGHMVF--GPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGG-TP 154 (324)
T ss_dssp HHHHHHSC--CSEEEECCCCCBC--SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-CC
T ss_pred HHHHHcCC--CCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccC-CC
Confidence 77777776 4599999998764 6788999999999999999999999999999999888999999999999852 35
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcccc---C----------------------------
Q 020854 203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKR---S---------------------------- 251 (320)
Q Consensus 203 ~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~---~---------------------------- 251 (320)
++.+.|++||+|+++++++++.|+++.||+|++|+||+++|++..... +
T Consensus 155 ~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 234 (324)
T 3u9l_A 155 PYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAAI 234 (324)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHHHT
T ss_pred CcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHHHh
Confidence 678899999999999999999999999999999999999987643100 0
Q ss_pred CCCCCCHHHHHHHHHHHhCCC
Q 020854 252 SFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 252 ~~~~~~~~~~a~~i~~~l~~~ 272 (320)
.....+|+++|+.++..++.+
T Consensus 235 ~~~~~~p~~vA~aiv~~~~~~ 255 (324)
T 3u9l_A 235 VPPDADVSLVADAIVRVVGTA 255 (324)
T ss_dssp SCTTCCTHHHHHHHHHHHTSC
T ss_pred cCCCCCHHHHHHHHHHHhcCC
Confidence 001157899999999999765
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=271.13 Aligned_cols=211 Identities=24% Similarity=0.375 Sum_probs=172.9
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHH----
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKE---- 126 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~---- 126 (320)
++ |++|||||++|||+++|++|+++|++|++++|+.+++++..+++... .++..+.+|++|. +.++++.+
T Consensus 20 ~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~--~~v~~~~~~~~~ 93 (272)
T 2nwq_A 20 MS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK---TRVLPLTLDVRDR--AAMSAAVDNLPE 93 (272)
T ss_dssp -C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT---SCEEEEECCTTCH--HHHHHHHHTCCG
T ss_pred cC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC---CcEEEEEcCCCCH--HHHHHHHHHHHH
Confidence 44 99999999999999999999999999999999999988887777432 4688899999986 44444444
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCc-EEEEEcCccccccCCCCCc
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKG-AIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g-~Iv~vsS~~~~~~~~~~~~ 205 (320)
.++ ++|+||||||.... ..++.+.+.++|++++++|+.|++++++.++|.|++++.| +||++||.++.. +.++.
T Consensus 94 ~~g--~iD~lvnnAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~--~~~~~ 168 (272)
T 2nwq_A 94 EFA--TLRGLINNAGLALG-TDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKW--PYPGS 168 (272)
T ss_dssp GGS--SCCEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTS--CCTTC
T ss_pred HhC--CCCEEEECCCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhcc--CCCCC
Confidence 344 46699999998642 2567889999999999999999999999999999887778 999999999987 67888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcccc-----------CCCCCCCHHHHHHHHHHHhCCC
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKR-----------SSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~-----------~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
..|++||+|+++|+++++.|++++||+||+|+||+++|+|..... ......+||++|+.++..+..+
T Consensus 169 ~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~ 246 (272)
T 2nwq_A 169 HVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKTYAGAHPIQPEDIAETIFWIMNQP 246 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC--------------------CCCCBCHHHHHHHHHHHHTSC
T ss_pred chHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchHHHHHhhccCCCCCHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999999999999999864210 0112357888888888877654
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-37 Score=270.63 Aligned_cols=227 Identities=17% Similarity=0.150 Sum_probs=185.0
Q ss_pred cccCCCEEEEECCC--CcHHHHHHHHHHHcCCeEEEEeCCHHHH-HHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHH
Q 020854 49 LRKYGSWALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRNPDKL-KDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVER 123 (320)
Q Consensus 49 ~~~~gk~vlITGas--~GIG~ala~~l~~~G~~Vil~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~ 123 (320)
++++||+++||||+ +|||+++|++|+++|++|++++|+.++. ++..+++.+.. +.++.++++|++|. +++.+++
T Consensus 16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~ 94 (267)
T 3gdg_A 16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTY-GIKAKAYKCQVDSYESCEKLVKD 94 (267)
T ss_dssp HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHH-CCCEECCBCCTTCHHHHHHHHHH
T ss_pred cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhc-CCceeEEecCCCCHHHHHHHHHH
Confidence 45789999999999 9999999999999999999999886654 66677776554 46789999999984 3566677
Q ss_pred HHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCC
Q 020854 124 IKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP 203 (320)
Q Consensus 124 ~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~ 203 (320)
+.+.+++ +|+||||||+... .++.+.+.+++++++++|+.|++++++.++|.|++++.|+||++||.++......+
T Consensus 95 ~~~~~g~--id~li~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~ 170 (267)
T 3gdg_A 95 VVADFGQ--IDAFIANAGATAD--SGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQ 170 (267)
T ss_dssp HHHHTSC--CSEEEECCCCCCC--SCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSS
T ss_pred HHHHcCC--CCEEEECCCcCCC--CCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCC
Confidence 7777775 5599999998765 56888999999999999999999999999999998888999999999998732225
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHH
Q 020854 204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSF 283 (320)
Q Consensus 204 ~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~ 283 (320)
+...|++||+|+++|+++++.|+++. |+||+|+||+++|+|.... +++..+......+.++...|++....
T Consensus 171 ~~~~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~~--------~~~~~~~~~~~~~~~r~~~~~dva~~ 241 (267)
T 3gdg_A 171 EQTSYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFV--------PKETQQLWHSMIPMGRDGLAKELKGA 241 (267)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGGS--------CHHHHHHHHTTSTTSSCEETHHHHHH
T ss_pred CCCcchHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhhC--------CHHHHHHHHhcCCCCCCcCHHHHHhH
Confidence 78999999999999999999999887 9999999999999997631 23333444444455566666666666
Q ss_pred HHHHHh
Q 020854 284 IWGVLS 289 (320)
Q Consensus 284 ~~~l~~ 289 (320)
+.++++
T Consensus 242 ~~~l~s 247 (267)
T 3gdg_A 242 YVYFAS 247 (267)
T ss_dssp HHHHHS
T ss_pred hheeec
Confidence 665543
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=269.33 Aligned_cols=205 Identities=23% Similarity=0.258 Sum_probs=173.0
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++++||++|||||++|||+++|++|+++|++|++++|+.++.+ ...+..+.+|++|. +++.++++.+
T Consensus 24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dv~d~~~v~~~~~~~~~ 92 (260)
T 3un1_A 24 MRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA-----------DPDIHTVAGDISKPETADRIVREGIE 92 (260)
T ss_dssp HHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS-----------STTEEEEESCTTSHHHHHHHHHHHHH
T ss_pred hCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc-----------cCceEEEEccCCCHHHHHHHHHHHHH
Confidence 3467999999999999999999999999999999999876432 34688999999985 3566677777
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
.+++ +|+||||||+... .++.+.+.+++++++++|+.|++++++.++|.|++++.|+||++||..+....+.++..
T Consensus 93 ~~g~--iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~ 168 (260)
T 3un1_A 93 RFGR--IDSLVNNAGVFLA--KPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSA 168 (260)
T ss_dssp HHSC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCH
T ss_pred HCCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccH
Confidence 7775 5599999998764 67889999999999999999999999999999999989999999998886532445678
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc--------ccCCCCCCCHHHHHHHHHHH
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI--------KRSSFFVPSTDVYARAAMRW 268 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~--------~~~~~~~~~~~~~a~~i~~~ 268 (320)
.|++||+|+++|+++++.|++++||+||+|+||+++|+|... ..+.....+|+++|+.++..
T Consensus 169 ~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~p~~r~~~~~dva~av~~L 238 (260)
T 3un1_A 169 LASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAETHSTLAGLHPVGRMGEIRDVVDAVLYL 238 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGGHHHHHTTSTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHHHHHHhccCCCCCCcCHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999753 12223345677777776655
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-36 Score=271.71 Aligned_cols=191 Identities=20% Similarity=0.225 Sum_probs=160.0
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH-HHHHHHHHHHHhhcCCceEEEEEEeCCC----C--cHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP-DKLKDVSDSIQAKYAKTQIKSVVVDFSG----D--LDEG 120 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~~~----~--~~~~ 120 (320)
..+++||+++||||++|||+++|++|+++|++|++++|+. +++++..+++.... +.++.++.+|++| . +++.
T Consensus 18 ~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~~~~~v~~~ 96 (288)
T 2x9g_A 18 GSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKER-SNTAVVCQADLTNSNVLPASCEEI 96 (288)
T ss_dssp ----CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSCSTTHHHHHHHH
T ss_pred CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhc-CCceEEEEeecCCccCCHHHHHHH
Confidence 3457799999999999999999999999999999999998 88888888876332 4578899999998 3 2445
Q ss_pred HHHHHHHHcCCCeEEEEEccCCCCCccccc-----cC-----CCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC------
Q 020854 121 VERIKEAIEGLDVGVLINNVGISYPYARFF-----HE-----VDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK------ 184 (320)
Q Consensus 121 ~~~~~~~~~~~~id~lI~nAG~~~~~~~~~-----~~-----~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~------ 184 (320)
++++.+.+++ +|+||||||+... .++ .+ .+.+++++++++|+.|++.+++.++|.|.+++
T Consensus 97 ~~~~~~~~g~--iD~lvnnAG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~ 172 (288)
T 2x9g_A 97 INSCFRAFGR--CDVLVNNASAFYP--TPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSS 172 (288)
T ss_dssp HHHHHHHHSC--CCEEEECCCCCCC--CCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CC
T ss_pred HHHHHHhcCC--CCEEEECCCCCCC--CccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCC
Confidence 5555666665 5599999998754 345 56 78899999999999999999999999998766
Q ss_pred CcEEEEEcCccccccCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCC
Q 020854 185 KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKM 245 (320)
Q Consensus 185 ~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~ 245 (320)
.|+||++||.++.. +.++...|++||+|+.+|+++|+.|++++||+||+|+||+++|+|
T Consensus 173 ~g~iv~isS~~~~~--~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 231 (288)
T 2x9g_A 173 NLSIVNLCDAMVDQ--PCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV 231 (288)
T ss_dssp CEEEEEECCTTTTS--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT
T ss_pred CeEEEEEecccccC--CCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc
Confidence 78999999999988 678899999999999999999999999999999999999999998
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=268.11 Aligned_cols=185 Identities=24% Similarity=0.284 Sum_probs=165.1
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
++||+++||||++|||++++++|+++|++|++++|+.+++++..+++ +.++..+++|++|. +++.++++.+.+
T Consensus 4 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (253)
T 1hxh_A 4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRHDVSSEADWTLVMAAVQRRL 78 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 56999999999999999999999999999999999998888777666 34688899999985 355666777777
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
++ +|+||||||.... .++.+.+.++|++++++|+.|++.+++.++|.|++++ |+||++||.++.. +.++...|
T Consensus 79 g~--id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~--~~~~~~~Y 151 (253)
T 1hxh_A 79 GT--LNVLVNNAGILLP--GDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWL--PIEQYAGY 151 (253)
T ss_dssp CS--CCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTS--CCTTBHHH
T ss_pred CC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcC--CCCCCccH
Confidence 75 5599999998754 5688899999999999999999999999999998776 9999999999988 67889999
Q ss_pred HHHHHHHHHHHHHHHHHHccC--CceEEEEeccceecCCCc
Q 020854 209 AATKAYIDQFSRSLYVEYRKS--GIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~--gi~v~~v~PG~v~T~~~~ 247 (320)
++||+++++|+++++.|++++ ||+|++|+||+++|++..
T Consensus 152 ~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~ 192 (253)
T 1hxh_A 152 SASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQ 192 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhh
Confidence 999999999999999999988 999999999999999854
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-36 Score=267.42 Aligned_cols=222 Identities=22% Similarity=0.264 Sum_probs=181.4
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEE-EeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++.+|+++||||++|||+++|++|+++|++|++ ..|+.++.++..+++.+. +.++.++.+|++|. +++.++++.+
T Consensus 23 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~ 100 (267)
T 4iiu_A 23 NAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVAN--GGNGRLLSFDVANREQCREVLEHEIA 100 (267)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHH
Confidence 367899999999999999999999999999966 568888888888888765 45688899999984 3556666777
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhh-cCCCcEEEEEcCccccccCCCCCc
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGML-KRKKGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~-~~~~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
.+++ +|+||||||.... .++.+.+.+++++++++|+.|++++++.++|.|. +++.|+||++||.++.. +.++.
T Consensus 101 ~~g~--id~li~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~ 174 (267)
T 4iiu_A 101 QHGA--WYGVVSNAGIARD--AAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVM--GNRGQ 174 (267)
T ss_dssp HHCC--CSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHH--CCTTC
T ss_pred HhCC--ccEEEECCCCCCC--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhcc--CCCCC
Confidence 7775 4599999998765 6688899999999999999999999999998886 66789999999999988 77889
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHH
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIW 285 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~ 285 (320)
..|++||+|+.+|+++++.|++++||+|++|+||+++|++.... ++..+......+.++...|++....+.
T Consensus 175 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---------~~~~~~~~~~~p~~~~~~~edva~~~~ 245 (267)
T 4iiu_A 175 VNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME---------ESALKEAMSMIPMKRMGQAEEVAGLAS 245 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC---------HHHHHHHHHTCTTCSCBCHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc---------HHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 99999999999999999999999999999999999999997631 222333344444445555555555555
Q ss_pred HHH
Q 020854 286 GVL 288 (320)
Q Consensus 286 ~l~ 288 (320)
+++
T Consensus 246 ~L~ 248 (267)
T 4iiu_A 246 YLM 248 (267)
T ss_dssp HHH
T ss_pred HHh
Confidence 544
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-36 Score=268.23 Aligned_cols=232 Identities=24% Similarity=0.313 Sum_probs=172.4
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhh-cCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAK-YAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
++||+++||||++|||++++++|+++|++|++++|+.+++++..+++... ..+.++..+.+|++|. +++.++++.+.
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK 83 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence 56899999999999999999999999999999999999988888777431 1235688999999985 35566677777
Q ss_pred HcCCCeEEEEEccCCCCCccccccCC----CHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccc-cccCCC
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEV----DQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAA-IVIPSD 202 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~----~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~-~~~~~~ 202 (320)
+++ +|+||||||.... .++.+. +.+++++++++|+.|++++++.++|.|++++ |+||++||.++ .. +.
T Consensus 84 ~g~--id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~--~~ 156 (278)
T 1spx_A 84 FGK--LDILVNNAGAAIP--DSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLH--AT 156 (278)
T ss_dssp HSC--CCEEEECCC---------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSS--CC
T ss_pred cCC--CCEEEECCCCCCC--cccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEeccccccc--CC
Confidence 775 5599999998654 456677 8999999999999999999999999998765 99999999998 76 67
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccC-CCCCCCHHHHHHHHHHHhCCCCcccCCchH
Q 020854 203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRS-SFFVPSTDVYARAAMRWIGYEPCCTPYWPH 281 (320)
Q Consensus 203 ~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~ 281 (320)
++...|++||+++++++++++.|++++||+|++|+||+++|++...... ........+..+.+....+.++...|.+..
T Consensus 157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA 236 (278)
T 1spx_A 157 PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIA 236 (278)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCCcCCCCHHHHH
Confidence 8889999999999999999999999999999999999999998653110 000000011122223333444556666666
Q ss_pred HHHHHHHh
Q 020854 282 SFIWGVLS 289 (320)
Q Consensus 282 ~~~~~l~~ 289 (320)
..+.++++
T Consensus 237 ~~v~~l~s 244 (278)
T 1spx_A 237 EVIAFLAD 244 (278)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHcC
Confidence 66555543
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-36 Score=270.25 Aligned_cols=187 Identities=21% Similarity=0.305 Sum_probs=162.9
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCC------------HHHHHHHHHHHHhhcCCceEEEEEEeCCCC
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN------------PDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~ 116 (320)
.+++||++|||||++|||+++|++|+++|++|++++|+ .+++++..+++... +.++..+++|++|.
T Consensus 6 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~ 83 (287)
T 3pxx_A 6 GRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT--GRKAYTAEVDVRDR 83 (287)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT--TSCEEEEECCTTCH
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc--CCceEEEEccCCCH
Confidence 35779999999999999999999999999999999998 77777777777654 56789999999985
Q ss_pred --cHHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCc
Q 020854 117 --LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSG 194 (320)
Q Consensus 117 --~~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~ 194 (320)
+++.++++.+.+++ +|+||||||+... . .+.+.++|++++++|+.|++++++.++|+| ++.|+||++||.
T Consensus 84 ~~v~~~~~~~~~~~g~--id~lv~nAg~~~~--~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~g~iv~isS~ 155 (287)
T 3pxx_A 84 AAVSRELANAVAEFGK--LDVVVANAGICPL--G--AHLPVQAFADAFDVDFVGVINTVHAALPYL--TSGASIITTGSV 155 (287)
T ss_dssp HHHHHHHHHHHHHHSC--CCEEEECCCCCCC--C--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGC--CTTCEEEEECCH
T ss_pred HHHHHHHHHHHHHcCC--CCEEEECCCcCcc--c--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHh--hcCcEEEEeccc
Confidence 35666777777775 5599999998754 2 247889999999999999999999999999 457899999999
Q ss_pred cccccCCC-----------CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 195 AAIVIPSD-----------PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 195 ~~~~~~~~-----------~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
++.. +. ++...|++||+|+++|+++++.|++++||+||+|+||+|+|+|..
T Consensus 156 ~~~~--~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~ 217 (287)
T 3pxx_A 156 AGLI--AAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLN 217 (287)
T ss_dssp HHHH--HHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTS
T ss_pred hhcc--cccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccc
Confidence 9876 33 567889999999999999999999999999999999999999975
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-36 Score=269.83 Aligned_cols=231 Identities=18% Similarity=0.215 Sum_probs=183.6
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHH-HHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK-LKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERI 124 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~ 124 (320)
.++++||+++||||++|||+++|++|+++|++|++++|+.++ .++..+++.+. +.++..+.+|++|. +++.++++
T Consensus 24 ~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~ 101 (283)
T 1g0o_A 24 SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN--GSDAACVKANVGVVEDIVRMFEEA 101 (283)
T ss_dssp GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHh--CCCeEEEEcCCCCHHHHHHHHHHH
Confidence 345789999999999999999999999999999999998754 55666666554 45688899999984 35566667
Q ss_pred HHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCC-
Q 020854 125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP- 203 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~- 203 (320)
.+.+++ +|+||||||.... .++.+.+.+++++++++|+.|+++++++++|.| ++.|+||++||.++.. +.+
T Consensus 102 ~~~~g~--iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~g~iv~isS~~~~~--~~~~ 173 (283)
T 1g0o_A 102 VKIFGK--LDIVCSNSGVVSF--GHVKDVTPEEFDRVFTINTRGQFFVAREAYKHL--EIGGRLILMGSITGQA--KAVP 173 (283)
T ss_dssp HHHHSC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHS--CTTCEEEEECCGGGTC--SSCS
T ss_pred HHHcCC--CCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH--hcCCeEEEEechhhcc--CCCC
Confidence 777775 5599999998754 567889999999999999999999999999999 4579999999999987 444
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcccc----CCCCCCCHHHHHHHHHH--HhCCCCcccC
Q 020854 204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKR----SSFFVPSTDVYARAAMR--WIGYEPCCTP 277 (320)
Q Consensus 204 ~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~----~~~~~~~~~~~a~~i~~--~l~~~~~~~~ 277 (320)
+...|++||+++++|+++++.|++++||+||+|+||+++|+|..... +.....++ +..+.+.. ..+.++...|
T Consensus 174 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~r~~~p 252 (283)
T 1g0o_A 174 KHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSN-EEVDEYAAVQWSPLRRVGLP 252 (283)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCH-HHHHHHHHHHSCTTCSCBCH
T ss_pred CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCH-HHHHHHHhhcCCCCCCCcCH
Confidence 48899999999999999999999999999999999999999865311 11101123 23333333 3455577778
Q ss_pred CchHHHHHHHHh
Q 020854 278 YWPHSFIWGVLS 289 (320)
Q Consensus 278 ~~~~~~~~~l~~ 289 (320)
++....+.++++
T Consensus 253 ~dvA~~v~~l~s 264 (283)
T 1g0o_A 253 IDIARVVCFLAS 264 (283)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHHhC
Confidence 888887777665
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-36 Score=267.79 Aligned_cols=188 Identities=21% Similarity=0.253 Sum_probs=164.1
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
.+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++.++++|++|. +.++++.+.+
T Consensus 26 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~--~~v~~~~~~~ 98 (281)
T 3ppi_A 26 KQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL-----GNRAEFVSTNVTSE--DSVLAAIEAA 98 (281)
T ss_dssp GGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCH--HHHHHHHHHH
T ss_pred hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCceEEEEcCCCCH--HHHHHHHHHH
Confidence 3578999999999999999999999999999999999999988888777 45689999999986 5556665555
Q ss_pred cCC-CeEEEEEc-cCCCCCccccc-----cCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhc------CCCcEEEEEcCcc
Q 020854 129 EGL-DVGVLINN-VGISYPYARFF-----HEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK------RKKGAIVNIGSGA 195 (320)
Q Consensus 129 ~~~-~id~lI~n-AG~~~~~~~~~-----~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~------~~~g~Iv~vsS~~ 195 (320)
... ++|++||| ||.... ..+ .+.+.+++++++++|+.|++++++.++|.|.+ ++.|+||++||.+
T Consensus 99 ~~~~~id~lv~~aag~~~~--~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~ 176 (281)
T 3ppi_A 99 NQLGRLRYAVVAHGGFGVA--QRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIA 176 (281)
T ss_dssp TTSSEEEEEEECCCCCCCC--CCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGG
T ss_pred HHhCCCCeEEEccCccccc--ccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEeccc
Confidence 333 58899999 554432 222 46889999999999999999999999999986 5679999999999
Q ss_pred ccccCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 196 AIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 196 ~~~~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
+.. +.++...|++||+|+++|+++|+.|++++||+|++|+||+|+|++..
T Consensus 177 ~~~--~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~ 226 (281)
T 3ppi_A 177 GYE--GQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIME 226 (281)
T ss_dssp GTS--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH
T ss_pred ccC--CCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhh
Confidence 998 77889999999999999999999999999999999999999999875
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-36 Score=267.02 Aligned_cols=186 Identities=19% Similarity=0.191 Sum_probs=158.8
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeC-CHHHHHHHHHHHHhhcCCceEEEEEEeCCCC----c--HHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD----L--DEGVER 123 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~----~--~~~~~~ 123 (320)
++||++|||||++|||+++|++|+++|++|++++| +.+++++..+++.+.. +.++..+.+|++|. . ++.+++
T Consensus 9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 87 (276)
T 1mxh_A 9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR-AGSAVLCKGDLSLSSSLLDCCEDIIDC 87 (276)
T ss_dssp --CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhc-CCceEEEeccCCCccccHHHHHHHHHH
Confidence 56999999999999999999999999999999999 9988888888886652 34688899999976 2 556666
Q ss_pred HHHHHcCCCeEEEEEccCCCCCccccccCCCH-----------HHHHHHHHHHhHHHHHHHHHHhHhhhcCCC------c
Q 020854 124 IKEAIEGLDVGVLINNVGISYPYARFFHEVDQ-----------VLLKNLIKVNVEGTTKVTQAVLPGMLKRKK------G 186 (320)
Q Consensus 124 ~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~-----------~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~------g 186 (320)
+.+.+++ +|+||||||.... .++.+.+. ++|++++++|+.|++++++.++|.|. ++. |
T Consensus 88 ~~~~~g~--id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~~~~g 162 (276)
T 1mxh_A 88 SFRAFGR--CDVLVNNASAYYP--TPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAWRSRNL 162 (276)
T ss_dssp HHHHHSC--CCEEEECCCCCCC--CCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCE
T ss_pred HHHhcCC--CCEEEECCCCCCC--CCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCCCCCCc
Confidence 7777775 5599999998754 56777787 99999999999999999999999997 555 8
Q ss_pred EEEEEcCccccccCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecC
Q 020854 187 AIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATK 244 (320)
Q Consensus 187 ~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~ 244 (320)
+||++||.++.. +.++...|++||+++++|+++++.|++++||+||+|+||+++|+
T Consensus 163 ~iv~isS~~~~~--~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~ 218 (276)
T 1mxh_A 163 SVVNLCDAMTDL--PLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP 218 (276)
T ss_dssp EEEEECCGGGGS--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC
T ss_pred EEEEECchhhcC--CCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC
Confidence 999999999988 67889999999999999999999999999999999999999999
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-36 Score=269.80 Aligned_cols=212 Identities=26% Similarity=0.307 Sum_probs=180.5
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
+.+|+++||||++|||+++|++|+++|++|++++|+.+++++..+++ +..+..+.+|++|. +++.++++.+.+
T Consensus 3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 77 (281)
T 3m1a_A 3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY-----PDRAEAISLDVTDGERIDVVAADVLARY 77 (281)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC-----TTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCCceEEEeeCCCHHHHHHHHHHHHHhC
Confidence 46899999999999999999999999999999999998877765543 34688999999985 355666677777
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
++ +|+||||||.... .++.+.+.+++++++++|+.|++++++.++|.|++++.|+||++||.++.. +.++...|
T Consensus 78 g~--id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~Y 151 (281)
T 3m1a_A 78 GR--VDVLVNNAGRTQV--GAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQL--SFAGFSAY 151 (281)
T ss_dssp SC--CSEEEECCCCEEE--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC--CCTTCHHH
T ss_pred CC--CCEEEECCCcCCC--CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccC--CCCCchHH
Confidence 75 5599999998754 678899999999999999999999999999999988889999999999988 77889999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc------------------------cCCCCCCCHHHHHHH
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK------------------------RSSFFVPSTDVYARA 264 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~------------------------~~~~~~~~~~~~a~~ 264 (320)
++||+++++++++++.|++++||+|++|+||+++|++.... .+.....+|+++|+.
T Consensus 152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a 231 (281)
T 3m1a_A 152 SATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAA 231 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999996421 011124578888888
Q ss_pred HHHHhCCCC
Q 020854 265 AMRWIGYEP 273 (320)
Q Consensus 265 i~~~l~~~~ 273 (320)
++..+..+.
T Consensus 232 ~~~~~~~~~ 240 (281)
T 3m1a_A 232 IRLALDTEK 240 (281)
T ss_dssp HHHHHHSSS
T ss_pred HHHHHhCCC
Confidence 888877653
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-36 Score=265.31 Aligned_cols=206 Identities=25% Similarity=0.288 Sum_probs=172.9
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
++||+++||||++|||++++++|+++|++|++++|+.++ ++..+++. . ..+++|++|. +++.++++.+.+
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~------~-~~~~~D~~~~~~~~~~~~~~~~~~ 75 (256)
T 2d1y_A 4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG------G-AFFQVDLEDERERVRFVEEAAYAL 75 (256)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT------C-EEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh------C-CEEEeeCCCHHHHHHHHHHHHHHc
Confidence 569999999999999999999999999999999999877 65555542 3 6789999984 355666666777
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
++ +|+||||||.... .++.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||.++.. +.++...|
T Consensus 76 g~--iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~--~~~~~~~Y 149 (256)
T 2d1y_A 76 GR--VDVLVNNAAIAAP--GSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLF--AEQENAAY 149 (256)
T ss_dssp SC--CCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS--BCTTBHHH
T ss_pred CC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccC--CCCCChhH
Confidence 75 5599999998754 567889999999999999999999999999999988889999999999987 67889999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc-----------------cCCCCCCCHHHHHHHHHHHhC
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK-----------------RSSFFVPSTDVYARAAMRWIG 270 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~-----------------~~~~~~~~~~~~a~~i~~~l~ 270 (320)
++||+++++|+++++.|++++||+||+|+||+++|++.... .+.....+|+++|+.++..+.
T Consensus 150 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s 228 (256)
T 2d1y_A 150 NASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLAS 228 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999974321 011123466777776666554
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-36 Score=264.26 Aligned_cols=187 Identities=27% Similarity=0.328 Sum_probs=164.1
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
++||+++||||++|||++++++|+++|++|++++|+.+ ++..+++.+. +.++..+.+|++|. +++.++++.+.+
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 77 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARH--GVKAVHHPADLSDVAQIEALFALAEREF 77 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTT--SCCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhc--CCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999999999999999876 4455566543 34688889999985 355666677777
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
++ +|+||||||.... .++.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||.++.. +.++...|
T Consensus 78 g~--id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~Y 151 (255)
T 2q2v_A 78 GG--VDILVNNAGIQHV--APVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLV--GSTGKAAY 151 (255)
T ss_dssp SS--CSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS--CCTTBHHH
T ss_pred CC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhcc--CCCCchhH
Confidence 75 5599999998754 567889999999999999999999999999999988889999999999987 67889999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
++||+++++|+++++.|++++||+||+|+||+++|++..
T Consensus 152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 190 (255)
T 2q2v_A 152 VAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQ 190 (255)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchh
Confidence 999999999999999999999999999999999999854
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-36 Score=266.73 Aligned_cols=230 Identities=23% Similarity=0.249 Sum_probs=181.3
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++. .++..+++|++|. +++.++++.+
T Consensus 8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~d~~~v~~~~~~~~~ 82 (263)
T 3ak4_A 8 FDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE-----NGGFAVEVDVTKRASVDAAMQKAID 82 (263)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT-----TCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh-----cCCeEEEEeCCCHHHHHHHHHHHHH
Confidence 34679999999999999999999999999999999999988776655442 2577889999984 3556667777
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccccCCCCCc
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
.+++ +|+||||||.... .++.+.+.++|++++++|+.|++++++.++|.|.+++ .|+||++||..+.. +.++.
T Consensus 83 ~~g~--iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~ 156 (263)
T 3ak4_A 83 ALGG--FDLLCANAGVSTM--RPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKV--GAPLL 156 (263)
T ss_dssp HHTC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS--CCTTC
T ss_pred HcCC--CCEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccc--CCCCc
Confidence 7775 5599999998754 5678899999999999999999999999999998877 79999999999987 67888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCC---CCCCCHHHHHHHHHHHhCCCCcccCCchHH
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSS---FFVPSTDVYARAAMRWIGYEPCCTPYWPHS 282 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~---~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~ 282 (320)
..|++||+++++|+++++.|++++||+|++|+||+++|++....... ....++++..+.+....+.++...|.+...
T Consensus 157 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ 236 (263)
T 3ak4_A 157 AHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVAD 236 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 99999999999999999999999999999999999999985421000 000011222333333334445566666666
Q ss_pred HHHHHHh
Q 020854 283 FIWGVLS 289 (320)
Q Consensus 283 ~~~~l~~ 289 (320)
.+.++++
T Consensus 237 ~v~~l~s 243 (263)
T 3ak4_A 237 VVVFLAS 243 (263)
T ss_dssp HHHHHHS
T ss_pred HHHHHhC
Confidence 6555543
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-36 Score=268.66 Aligned_cols=207 Identities=22% Similarity=0.256 Sum_probs=171.9
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
++||+++|||||+|||++++++|+++|++|++++|+.+++++..+++ ..++..+.+|++|. +++.++++.+.+
T Consensus 4 l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (263)
T 2a4k_A 4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVADVSDPKAVEAVFAEALEEF 78 (263)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-----CSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 56999999999999999999999999999999999998887766554 24688899999985 355666677777
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
++ +|+||||||.... .++.+.+.++|++++++|+.|++++++.++|.| ++ .|+||++||.++. +.++...|
T Consensus 79 g~--iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~-~g~iv~isS~~~~---~~~~~~~Y 149 (263)
T 2a4k_A 79 GR--LHGVAHFAGVAHS--ALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE-GGSLVLTGSVAGL---GAFGLAHY 149 (263)
T ss_dssp SC--CCEEEEGGGGTTT--TC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT-TCEEEEECCCTTC---CHHHHHHH
T ss_pred CC--CcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc-CCEEEEEecchhc---CCCCcHHH
Confidence 75 5599999998754 567889999999999999999999999999999 54 7999999999887 34668899
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc-----------cCCCCCCCHHHHHHHHHHHhCC
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK-----------RSSFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~-----------~~~~~~~~~~~~a~~i~~~l~~ 271 (320)
++||+++++|+++++.|++++||+||+|+||+++|++.... .+.....+|+++|+.++..+..
T Consensus 150 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~ 223 (263)
T 2a4k_A 150 AAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFLLSE 223 (263)
T ss_dssp HHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 99999999999999999999999999999999999986531 1222356788888888777653
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-36 Score=267.42 Aligned_cols=222 Identities=21% Similarity=0.280 Sum_probs=178.7
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
++||+++||||++|||++++++|+++|++|++++|+.+++++.. ++ .++..+.+|++|. +.++++.+.+++
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~------~~~~~~~~D~~~~--~~~~~~~~~~~~ 74 (246)
T 2ag5_A 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY------PGIQTRVLDVTKK--KQIDQFANEVER 74 (246)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS------TTEEEEECCTTCH--HHHHHHHHHCSC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc------cCceEEEeeCCCH--HHHHHHHHHhCC
Confidence 56999999999999999999999999999999999987765443 22 2578899999986 666677777765
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCC-CchhhH
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP-LYSVYA 209 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~-~~~~Y~ 209 (320)
+|+||||||.... .++.+.+.++|++++++|+.|++++++.++|+|++++.|+||++||.++.. +.+ +...|+
T Consensus 75 --id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~~Y~ 148 (246)
T 2ag5_A 75 --LDVLFNVAGFVHH--GTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSV--KGVVNRCVYS 148 (246)
T ss_dssp --CSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTT--BCCTTBHHHH
T ss_pred --CCEEEECCccCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCc--CCCCCCccHH
Confidence 5599999998764 567889999999999999999999999999999888889999999999987 455 789999
Q ss_pred HHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHHHh
Q 020854 210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVLS 289 (320)
Q Consensus 210 asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l~~ 289 (320)
+||+++++++++++.|++++||+|++|+||+++|++....... ...+++..+.+....+.++...|++.+..+.++++
T Consensus 149 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s 226 (246)
T 2ag5_A 149 TTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQA--RGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLAS 226 (246)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHH--SSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhc--ccCcHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999985421000 01223333334444444566666666666666553
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-36 Score=276.67 Aligned_cols=212 Identities=21% Similarity=0.241 Sum_probs=182.1
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCC----------HHHHHHHHHHHHhhcCCceEEEEEEeCCCC--c
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN----------PDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--L 117 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~----------~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~ 117 (320)
.++||++|||||++|||+++|++|+++|++|++++|+ .+++++..+++.+. +.++..+.+|++|. +
T Consensus 24 ~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v 101 (322)
T 3qlj_A 24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA--GGEAVADGSNVADWDQA 101 (322)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHT--TCEEEEECCCTTSHHHH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHH
Confidence 4779999999999999999999999999999999998 67788888888765 45788999999984 3
Q ss_pred HHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC------CcEEEEE
Q 020854 118 DEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK------KGAIVNI 191 (320)
Q Consensus 118 ~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~------~g~Iv~v 191 (320)
++.++++.+.+++ +|+||||||.... .++.+.+.++|++++++|+.|++.+++.+.|.|.+.+ .|+||++
T Consensus 102 ~~~~~~~~~~~g~--iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~i 177 (322)
T 3qlj_A 102 AGLIQTAVETFGG--LDVLVNNAGIVRD--RMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINT 177 (322)
T ss_dssp HHHHHHHHHHHSC--CCEEECCCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred HHHHHHHHHHcCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEE
Confidence 5667777777775 5599999999765 6788999999999999999999999999999987532 3899999
Q ss_pred cCccccccCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccC--------CCCCCCHHHHHH
Q 020854 192 GSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRS--------SFFVPSTDVYAR 263 (320)
Q Consensus 192 sS~~~~~~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~--------~~~~~~~~~~a~ 263 (320)
||.++.. +.++...|++||+|+++|+++++.|++++||+||+|+|| ++|+|...... .....+|+++|+
T Consensus 178 sS~~~~~--~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~~~~~~~~~~~~pedva~ 254 (322)
T 3qlj_A 178 SSGAGLQ--GSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMMATQDQDFDAMAPENVSP 254 (322)
T ss_dssp CCHHHHH--CBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC--------CCTTCGGGTHH
T ss_pred cCHHHcc--CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhhhccccccCCCCHHHHHH
Confidence 9999988 678899999999999999999999999999999999999 99999763211 112357888888
Q ss_pred HHHHHhC
Q 020854 264 AAMRWIG 270 (320)
Q Consensus 264 ~i~~~l~ 270 (320)
.++..+.
T Consensus 255 ~v~~L~s 261 (322)
T 3qlj_A 255 LVVWLGS 261 (322)
T ss_dssp HHHHHTS
T ss_pred HHHHHhC
Confidence 8877664
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-36 Score=269.32 Aligned_cols=214 Identities=21% Similarity=0.271 Sum_probs=180.0
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC---cHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD---LDEGVERIKE 126 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~ 126 (320)
.++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+ +.++.++.+|++|. ++..++.+.+
T Consensus 9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~v~~~~~~~~~ 87 (311)
T 3o26_A 9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN-HENVVFHQLDVTDPIATMSSLADFIKT 87 (311)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT-CCSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCceEEEEccCCCcHHHHHHHHHHHHH
Confidence 3569999999999999999999999999999999999999999999987764 45789999999986 2566677777
Q ss_pred HHcCCCeEEEEEccCCCCC----------------------------ccccccCCCHHHHHHHHHHHhHHHHHHHHHHhH
Q 020854 127 AIEGLDVGVLINNVGISYP----------------------------YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLP 178 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~----------------------------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 178 (320)
.+++ +|+||||||+... ...++.+.+.+++++++++|+.|++.+++.++|
T Consensus 88 ~~g~--iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 165 (311)
T 3o26_A 88 HFGK--LDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIP 165 (311)
T ss_dssp HHSS--CCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred hCCC--CCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhH
Confidence 7775 5599999998742 112455778999999999999999999999999
Q ss_pred hhhcCCCcEEEEEcCccccccC----------------------------------------C-CCCchhhHHHHHHHHH
Q 020854 179 GMLKRKKGAIVNIGSGAAIVIP----------------------------------------S-DPLYSVYAATKAYIDQ 217 (320)
Q Consensus 179 ~l~~~~~g~Iv~vsS~~~~~~~----------------------------------------~-~~~~~~Y~asKaal~~ 217 (320)
.|++++.|+||++||.++.... + .++...|++||+|+++
T Consensus 166 ~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~ 245 (311)
T 3o26_A 166 LLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNA 245 (311)
T ss_dssp HHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHH
T ss_pred hhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHH
Confidence 9998888999999999986521 0 1456889999999999
Q ss_pred HHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCC
Q 020854 218 FSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 218 ~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
|+++|+.|+. +|+|++|+||+|+|+|.... ...++++.|+.++..+..+
T Consensus 246 ~~~~la~e~~--~i~v~~v~PG~v~T~~~~~~----~~~~~~~~a~~~~~~~~~~ 294 (311)
T 3o26_A 246 YTRVLANKIP--KFQVNCVCPGLVKTEMNYGI----GNYTAEEGAEHVVRIALFP 294 (311)
T ss_dssp HHHHHHHHCT--TSEEEEECCCSBCSGGGTTC----CSBCHHHHHHHHHHHHTCC
T ss_pred HHHHHHhhcC--CceEEEecCCceecCCcCCC----CCCCHHHHHHHHHHHHhCC
Confidence 9999999985 49999999999999997642 2368999999999987755
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-35 Score=257.34 Aligned_cols=213 Identities=22% Similarity=0.224 Sum_probs=184.0
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-------eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-------NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVE 122 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-------~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~ 122 (320)
+||+++||||++|||++++++|+++|+ +|++++|+.+++++..+++... +.++..+.+|++|. +++.++
T Consensus 1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~ 78 (244)
T 2bd0_A 1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDTITADISDMADVRRLTT 78 (244)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT--TCEEEEEECCTTSHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHcc--CCeeeEEEecCCCHHHHHHHHH
Confidence 378999999999999999999999999 9999999999888888877653 45788999999985 345556
Q ss_pred HHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCC
Q 020854 123 RIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD 202 (320)
Q Consensus 123 ~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~ 202 (320)
++.+.+++ +|+||||||.... .++.+.+.+++++++++|+.|++++++.++|.|.+++.++||++||.++.. +.
T Consensus 79 ~~~~~~g~--id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~--~~ 152 (244)
T 2bd0_A 79 HIVERYGH--IDCLVNNAGVGRF--GALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATK--AF 152 (244)
T ss_dssp HHHHHTSC--CSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CC
T ss_pred HHHHhCCC--CCEEEEcCCcCCc--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcC--CC
Confidence 66666664 5599999998754 567888999999999999999999999999999887889999999999987 67
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccC--CCCCCCHHHHHHHHHHHhCCC
Q 020854 203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRS--SFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 203 ~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~--~~~~~~~~~~a~~i~~~l~~~ 272 (320)
++...|++||+++++|+++++.|+++.||+|++|+||+++|++...... .....+|+++|+.++..+..+
T Consensus 153 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 224 (244)
T 2bd0_A 153 RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEMQALMMMPEDIAAPVVQAYLQP 224 (244)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTTGGGSBCHHHHHHHHHHHHTSC
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccccccccCCCHHHHHHHHHHHHhCC
Confidence 8889999999999999999999999999999999999999999764211 124678999999999988765
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-37 Score=270.25 Aligned_cols=210 Identities=23% Similarity=0.280 Sum_probs=161.9
Q ss_pred hccCCcccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHH
Q 020854 42 FLRPAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDE 119 (320)
Q Consensus 42 ~~~~~~~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~ 119 (320)
..+|....+++||+++||||++|||+++|++|+++|++|++++|+.++++ .+..+++|++|. +++
T Consensus 10 ~~~~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~Dl~d~~~v~~ 76 (253)
T 2nm0_A 10 HSSGLVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-------------GFLAVKCDITDTEQVEQ 76 (253)
T ss_dssp ----------CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-------------TSEEEECCTTSHHHHHH
T ss_pred cCCCCCccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-------------cceEEEecCCCHHHHHH
Confidence 34555566788999999999999999999999999999999999876432 267889999985 345
Q ss_pred HHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccccc
Q 020854 120 GVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI 199 (320)
Q Consensus 120 ~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~ 199 (320)
.++++.+.+++ +|+||||||.... .++.+.+.+++++++++|+.|++.+++.++|.|++++.|+||++||.++..
T Consensus 77 ~~~~~~~~~g~--iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~- 151 (253)
T 2nm0_A 77 AYKEIEETHGP--VEVLIANAGVTKD--QLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLL- 151 (253)
T ss_dssp HHHHHHHHTCS--CSEEEEECSCCTT--TC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCC-
T ss_pred HHHHHHHHcCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCC-
Confidence 56666666665 5599999998754 567788999999999999999999999999999887889999999999987
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc-----------cCCCCCCCHHHHHHHHHHH
Q 020854 200 PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK-----------RSSFFVPSTDVYARAAMRW 268 (320)
Q Consensus 200 ~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~-----------~~~~~~~~~~~~a~~i~~~ 268 (320)
+.++...|++||+|+++|+++++.|+++.||+||+|+||+++|++.... .+.....+|+++|+.++..
T Consensus 152 -~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~i~~l 230 (253)
T 2nm0_A 152 -GSAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTDEQRANIVSQVPLGRYARPEEIAATVRFL 230 (253)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC---------CHHHHHTTCTTCSCBCHHHHHHHHHHH
T ss_pred -CCCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 5677889999999999999999999999999999999999999986521 1112234666666666655
Q ss_pred hC
Q 020854 269 IG 270 (320)
Q Consensus 269 l~ 270 (320)
+.
T Consensus 231 ~s 232 (253)
T 2nm0_A 231 AS 232 (253)
T ss_dssp HS
T ss_pred hC
Confidence 54
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-36 Score=266.26 Aligned_cols=226 Identities=19% Similarity=0.257 Sum_probs=177.1
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||+++||||++|||++++++|+++|++|++++|+.+++++..+++. .+..+++|++|. +++.++++.+.
T Consensus 6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~Dv~d~~~v~~~~~~~~~~ 79 (270)
T 1yde_A 6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP------GAVFILCDVTQEDDVKTLVSETIRR 79 (270)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT------TEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc------CCeEEEcCCCCHHHHHHHHHHHHHH
Confidence 3569999999999999999999999999999999999988776655441 377899999985 35566677777
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
+++ +|+||||||.... ..++.+.+.++|++++++|+.|++++++.++|+|.++ .|+||++||.++.. +.++...
T Consensus 80 ~g~--iD~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~ 153 (270)
T 1yde_A 80 FGR--LDCVVNNAGHHPP-PQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAI--GQAQAVP 153 (270)
T ss_dssp HSC--CCEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHH--CCTTCHH
T ss_pred cCC--CCEEEECCCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccC--CCCCCcc
Confidence 775 5599999998643 2567889999999999999999999999999999764 69999999999987 6788899
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHH
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGV 287 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l 287 (320)
|++||+++++++++++.|++++||+||+|+||+++|++....... ..++.+.........+.++...|.+.+..+.++
T Consensus 154 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L 231 (270)
T 1yde_A 154 YVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAAL--MPDPRASIREGMLAQPLGRMGQPAEVGAAAVFL 231 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTT--SSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhc--ccchHHHHHHHhhcCCCCCCcCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999985421100 011111111112223334555666666665555
Q ss_pred Hh
Q 020854 288 LS 289 (320)
Q Consensus 288 ~~ 289 (320)
++
T Consensus 232 ~s 233 (270)
T 1yde_A 232 AS 233 (270)
T ss_dssp HH
T ss_pred cc
Confidence 44
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-36 Score=265.50 Aligned_cols=213 Identities=24% Similarity=0.282 Sum_probs=173.6
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEE-eCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
.+|++|||||++|||+++|++|+++|++|+++ +|+.+.+++..+++.+. +.++..+.+|++|. +++.++++.+.+
T Consensus 25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 102 (272)
T 4e3z_A 25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES--GGEAVAIPGDVGNAADIAAMFSAVDRQF 102 (272)
T ss_dssp CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 47999999999999999999999999999886 78888888888888664 45789999999984 356667777777
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC---CCcEEEEEcCccccccCCCC-C
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR---KKGAIVNIGSGAAIVIPSDP-L 204 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~---~~g~Iv~vsS~~~~~~~~~~-~ 204 (320)
++ +|+||||||.... ..++.+.+.+++++++++|+.|++++++.++|.|.++ +.|+||++||.++.. +.+ +
T Consensus 103 g~--id~li~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~ 177 (272)
T 4e3z_A 103 GR--LDGLVNNAGIVDY-PQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAIL--GSATQ 177 (272)
T ss_dssp SC--CCEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHH--CCTTT
T ss_pred CC--CCEEEECCCCCCC-CCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhcc--CCCCC
Confidence 75 5599999998753 3568889999999999999999999999999999763 478999999999987 434 6
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc------------ccCCCCCCCHHHHHHHHHHHhCC
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI------------KRSSFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~------------~~~~~~~~~~~~~a~~i~~~l~~ 271 (320)
...|++||+|+++|+++++.|++++||+|++|+||+|+|++... ..+.....+||++|+.++..+..
T Consensus 178 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~s~ 256 (272)
T 4e3z_A 178 YVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSVPMQRAGMPEEVADAILYLLSP 256 (272)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------------------CCTTSSCBCHHHHHHHHHHHHSG
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHHHHHhhcCCcCCCcCHHHHHHHHHHHhCC
Confidence 78899999999999999999999999999999999999998652 11112234577777777776643
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-36 Score=266.20 Aligned_cols=193 Identities=18% Similarity=0.158 Sum_probs=157.0
Q ss_pred cccccCCCEEEEECCC--CcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHH
Q 020854 47 KNLRKYGSWALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVE 122 (320)
Q Consensus 47 ~~~~~~gk~vlITGas--~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~ 122 (320)
....+++|++|||||+ +|||+++|++|+++|++|++++|+.... +..+++.+..+ .+.++.+|++|. +++.++
T Consensus 8 ~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~ 84 (271)
T 3ek2_A 8 HMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFK-DRITEFAAEFG--SELVFPCDVADDAQIDALFA 84 (271)
T ss_dssp -CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHHHHHTT--CCCEEECCTTCHHHHHHHHH
T ss_pred CccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhH-HHHHHHHHHcC--CcEEEECCCCCHHHHHHHHH
Confidence 3445779999999999 9999999999999999999999995443 34455544433 478899999985 345556
Q ss_pred HHHHHHcCCCeEEEEEccCCCCCc--cccccC-CCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccccc
Q 020854 123 RIKEAIEGLDVGVLINNVGISYPY--ARFFHE-VDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI 199 (320)
Q Consensus 123 ~~~~~~~~~~id~lI~nAG~~~~~--~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~ 199 (320)
++.+.++ ++|+||||||+.... ..++.+ .+.+++++++++|+.|++++++.++|.|.+ .|+||++||.++..
T Consensus 85 ~~~~~~g--~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~- 159 (271)
T 3ek2_A 85 SLKTHWD--SLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAER- 159 (271)
T ss_dssp HHHHHCS--CEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE--EEEEEEEECGGGTS-
T ss_pred HHHHHcC--CCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc--CceEEEEecccccc-
Confidence 6666665 577999999987531 133444 899999999999999999999999999863 68999999999988
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc
Q 020854 200 PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI 248 (320)
Q Consensus 200 ~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~ 248 (320)
+.++...|++||+|+++|+++++.|++++||+|++|+||+|+|+|...
T Consensus 160 -~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~ 207 (271)
T 3ek2_A 160 -AIPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASG 207 (271)
T ss_dssp -BCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CC
T ss_pred -CCCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhc
Confidence 678899999999999999999999999999999999999999999763
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-36 Score=264.56 Aligned_cols=191 Identities=25% Similarity=0.311 Sum_probs=161.5
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH-
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA- 127 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~- 127 (320)
++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+. +.++..+.+|++|. +++.++++.+.
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (260)
T 2qq5_A 3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL--GGQCVPVVCDSSQESEVRSLFEQVDREQ 80 (260)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--SSEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc--CCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence 46999999999999999999999999999999999999998888888665 45788999999985 23444444443
Q ss_pred HcCCCeEEEEEccCCCCC-----ccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCC
Q 020854 128 IEGLDVGVLINNVGISYP-----YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD 202 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~-----~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~ 202 (320)
+++ +|+||||||.... ...++.+.+.++|++++++|+.+++++++.++|.|.+++.|+||++||.++.. +.
T Consensus 81 ~g~--id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~ 156 (260)
T 2qq5_A 81 QGR--LDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQ--YM 156 (260)
T ss_dssp TTC--CCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTS--CC
T ss_pred CCC--ceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcC--CC
Confidence 454 6699999953211 12467788899999999999999999999999999888889999999999876 32
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc
Q 020854 203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI 248 (320)
Q Consensus 203 ~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~ 248 (320)
....|++||+|+++|+++++.|++++||+||+|+||+++|+|...
T Consensus 157 -~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~ 201 (260)
T 2qq5_A 157 -FNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKE 201 (260)
T ss_dssp -SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC--
T ss_pred -CCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHH
Confidence 368899999999999999999999999999999999999999653
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-36 Score=274.37 Aligned_cols=215 Identities=22% Similarity=0.253 Sum_probs=173.6
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhh----cCCceEEEEEEeCCCCcHHHHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAK----YAKTQIKSVVVDFSGDLDEGVERIKEA 127 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~----~~~~~~~~~~~D~~~~~~~~~~~~~~~ 127 (320)
.||+++|||||+|||+++|++|+++|++|++++|+..++++..+.+... ..+.++..+.+|++|. +.++++.+.
T Consensus 1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~--~~v~~~~~~ 78 (327)
T 1jtv_A 1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDS--KSVAAARER 78 (327)
T ss_dssp CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCH--HHHHHHHHT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCH--HHHHHHHHH
Confidence 3799999999999999999999999999999888655444333333221 1235688999999986 566666665
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
+...++|+||||||+... .++.+.+.+++++++++|+.|++++++.++|+|++++.|+||++||.++.. +.++...
T Consensus 79 ~~~g~iD~lVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~--~~~~~~~ 154 (327)
T 1jtv_A 79 VTEGRVDVLVCNAGLGLL--GPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLM--GLPFNDV 154 (327)
T ss_dssp CTTSCCSEEEECCCCCCC--SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTS--CCTTCHH
T ss_pred HhcCCCCEEEECCCcCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCccccc--CCCCChH
Confidence 433357899999998653 567889999999999999999999999999999887889999999999988 6788999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCC----------------------------CCCCCHH
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSS----------------------------FFVPSTD 259 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~----------------------------~~~~~~~ 259 (320)
|++||+++++|+++|+.|+++.||+|++|+||+|+|+|....... ....+|+
T Consensus 155 Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe 234 (327)
T 1jtv_A 155 YCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPE 234 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhhcCCCHH
Confidence 999999999999999999999999999999999999996531110 0125899
Q ss_pred HHHHHHHHHhCCC
Q 020854 260 VYARAAMRWIGYE 272 (320)
Q Consensus 260 ~~a~~i~~~l~~~ 272 (320)
++|+.++..+..+
T Consensus 235 dvA~~i~~l~~~~ 247 (327)
T 1jtv_A 235 EVAEVFLTALRAP 247 (327)
T ss_dssp HHHHHHHHHHHCS
T ss_pred HHHHHHHHHHcCC
Confidence 9999999998653
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=265.17 Aligned_cols=190 Identities=16% Similarity=0.175 Sum_probs=161.9
Q ss_pred ccCCCEEEEECCC--CcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHH
Q 020854 50 RKYGSWALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 50 ~~~gk~vlITGas--~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
.++||+++||||+ +|||+++|++|+++|++|++++|+. .++..+++.+.++ .+..+.+|++|. +++.++++.
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~ 98 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFN--PAAVLPCDVISDQEIKDLFVELG 98 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGC--CSEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcC--CceEEEeecCCHHHHHHHHHHHH
Confidence 4679999999998 7899999999999999999999997 3445555655543 478899999985 355666666
Q ss_pred HHHcCCCeEEEEEccCCCCCc--cccccC-CCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCC
Q 020854 126 EAIEGLDVGVLINNVGISYPY--ARFFHE-VDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD 202 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~--~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~ 202 (320)
+.+++ +|+||||||+.... ..++.+ .+.+++++++++|+.+++++++.++|.|.++ .|+||++||.++.. +.
T Consensus 99 ~~~g~--id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~--~~ 173 (280)
T 3nrc_A 99 KVWDG--LDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR-NASMVALTYIGAEK--AM 173 (280)
T ss_dssp HHCSS--CCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECGGGTS--CC
T ss_pred HHcCC--CCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEecccccc--CC
Confidence 66665 56999999987531 133444 8999999999999999999999999999765 79999999999988 78
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc
Q 020854 203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI 248 (320)
Q Consensus 203 ~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~ 248 (320)
++...|++||+|+++|+++|+.|++++||+|++|+||+|+|++...
T Consensus 174 ~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~ 219 (280)
T 3nrc_A 174 PSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASG 219 (280)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGG
T ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhc
Confidence 8899999999999999999999999999999999999999999763
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-35 Score=263.96 Aligned_cols=212 Identities=20% Similarity=0.168 Sum_probs=172.7
Q ss_pred cCCCEEEEECCC--CcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 51 KYGSWALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 51 ~~gk~vlITGas--~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++||++|||||+ +|||+++|++|+++|++|++++|+.+ .++..+++.+..+. +..+.+|++|. +++.++++.+
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~--~~~~~~Dl~~~~~v~~~~~~~~~ 95 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGS--DLVVKCDVSLDEDIKNLKKFLEE 95 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTC--CCEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCC--eEEEEcCCCCHHHHHHHHHHHHH
Confidence 679999999999 99999999999999999999999985 45555666554332 67889999985 3455666666
Q ss_pred HHcCCCeEEEEEccCCCCCc--cccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCC
Q 020854 127 AIEGLDVGVLINNVGISYPY--ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL 204 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~--~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~ 204 (320)
.+++ +|+||||||..... ..++.+.+.+++++++++|+.|++++++.++|.|.++ +|+||++||.++.. +.++
T Consensus 96 ~~g~--iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~ 170 (285)
T 2p91_A 96 NWGS--LDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR-NGAIVTLSYYGAEK--VVPH 170 (285)
T ss_dssp HTSC--CCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS-CCEEEEEECGGGTS--BCTT
T ss_pred HcCC--CCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCEEEEEccchhcc--CCCC
Confidence 6665 55999999986421 1457788999999999999999999999999999754 69999999999987 6778
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc-------------cCCCCCCCHHHHHHHHHHHhC
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK-------------RSSFFVPSTDVYARAAMRWIG 270 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~-------------~~~~~~~~~~~~a~~i~~~l~ 270 (320)
...|++||+|+++|+++++.|++++||+||+|+||+|+|++.... .+.....+|+++|+.++..+.
T Consensus 171 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~s 249 (285)
T 2p91_A 171 YNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTAVFLCS 249 (285)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTS
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence 899999999999999999999999999999999999999986431 112234567777777766654
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=264.51 Aligned_cols=188 Identities=16% Similarity=0.174 Sum_probs=160.6
Q ss_pred cCCCEEEEECCC--CcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 51 KYGSWALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 51 ~~gk~vlITGas--~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++||+++||||+ +|||+++|++|+++|++|++++|+.+ .++..+++.+..+ .+..+.+|++|. +++.++++.+
T Consensus 4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~ 80 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELN--SPYVYELDVSKEEHFKSLYNSVKK 80 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcC--CcEEEEcCCCCHHHHHHHHHHHHH
Confidence 569999999999 99999999999999999999999986 4555566655433 367889999985 3455556666
Q ss_pred HHcCCCeEEEEEccCCCCCc--cccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCC
Q 020854 127 AIEGLDVGVLINNVGISYPY--ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL 204 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~--~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~ 204 (320)
.++ ++|+||||||..... ..++.+.+.+++++++++|+.|++++++.++|.|++ +|+||++||.++.. +.++
T Consensus 81 ~~g--~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~--~~~~ 154 (275)
T 2pd4_A 81 DLG--SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN--GASVLTLSYLGSTK--YMAH 154 (275)
T ss_dssp HTS--CEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTS--BCTT
T ss_pred HcC--CCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEecchhcC--CCCC
Confidence 665 477999999986421 145778899999999999999999999999999964 58999999999987 6788
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
...|++||+|+++|+++++.|++++||+||+|+||+|+|++..
T Consensus 155 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~ 197 (275)
T 2pd4_A 155 YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASS 197 (275)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGG
T ss_pred chhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhh
Confidence 8999999999999999999999999999999999999999865
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-36 Score=262.26 Aligned_cols=181 Identities=13% Similarity=0.079 Sum_probs=156.4
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEE-e--CCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLV-G--RNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~-~--r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
||+++||||++|||++++++|+++|++|+++ + |+.+++++..+++ . +.++. ..+++++.++++.+.++
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~-~---~~~~~-----~~~~v~~~~~~~~~~~g 71 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN-P---GTIAL-----AEQKPERLVDATLQHGE 71 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS-T---TEEEC-----CCCCGGGHHHHHGGGSS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh-C---CCccc-----CHHHHHHHHHHHHHHcC
Confidence 5899999999999999999999999999999 6 9998888776655 1 22221 23345677777777776
Q ss_pred CCCeEEEEEccCCCCCc-cccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 130 GLDVGVLINNVGISYPY-ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
++|+||||||..... ..++.+.+.++|++++++|+.|++++++.++|.|++++.|+||++||.++.. +.++...|
T Consensus 72 --~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~--~~~~~~~Y 147 (244)
T 1zmo_A 72 --AIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKK--PLAYNPLY 147 (244)
T ss_dssp --CEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS--CCTTCTTH
T ss_pred --CCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCC--CCCCchHH
Confidence 477999999986420 0467889999999999999999999999999999988889999999999988 67889999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCC
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMA 246 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~ 246 (320)
++||+|+++|+++++.|++++||+||+|+||+++|+|.
T Consensus 148 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~ 185 (244)
T 1zmo_A 148 GPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTY 185 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTT
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcc
Confidence 99999999999999999999999999999999999997
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-35 Score=256.00 Aligned_cols=209 Identities=22% Similarity=0.285 Sum_probs=170.0
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHc
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIE 129 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~ 129 (320)
.+|+++||||++|||++++++|+++|++|++++|+.+++++..+++. ++..+.+|++|. +++.++++.+.++
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE------GALPLPGDVREEGDWARAVAAMEEAFG 77 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST------TCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh------hceEEEecCCCHHHHHHHHHHHHHHcC
Confidence 57899999999999999999999999999999999988776655441 477889999985 3455566666666
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhH
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA 209 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~ 209 (320)
+ +|+||||||.... .++.+.+.+++++++++|+.|++++++.++|.|++++.++||++||..+.. +.++...|+
T Consensus 78 ~--id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~~~Y~ 151 (234)
T 2ehd_A 78 E--LSALVNNAGVGVM--KPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKN--PFKGGAAYN 151 (234)
T ss_dssp C--CCEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTS--CCTTCHHHH
T ss_pred C--CCEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcC--CCCCCchhh
Confidence 5 5699999998653 567888999999999999999999999999999988889999999999987 678889999
Q ss_pred HHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCC
Q 020854 210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 210 asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
+||++++.++++++.|++++||++++|+||+++|++...........+|+++|+.++..+..+
T Consensus 152 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~dvA~~~~~l~~~~ 214 (234)
T 2ehd_A 152 ASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNTPGQAWKLKPEDVAQAVLFALEMP 214 (234)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEECC----------------CCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccccccccCCCCHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999999999998764211111469999999999988654
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-36 Score=265.33 Aligned_cols=177 Identities=20% Similarity=0.272 Sum_probs=156.1
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHH-cCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAK-TGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~-~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
.++|++|||||++|||+++|++|++ .|++|++++|+.+. ....+..+.+|++|. +.++++.+.+.
T Consensus 2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~------------~~~~~~~~~~Dv~~~--~~v~~~~~~~~ 67 (244)
T 4e4y_A 2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF------------SAENLKFIKADLTKQ--QDITNVLDIIK 67 (244)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC------------CCTTEEEEECCTTCH--HHHHHHHHHTT
T ss_pred CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc------------ccccceEEecCcCCH--HHHHHHHHHHH
Confidence 3589999999999999999999999 78999999998651 133568899999986 66666666555
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhH
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA 209 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~ 209 (320)
..++|+||||||.... .++.+.+.++|++++++|+.|++++++.++|.|.++ |+||++||.++.. +.++...|+
T Consensus 68 ~~~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--g~iv~~sS~~~~~--~~~~~~~Y~ 141 (244)
T 4e4y_A 68 NVSFDGIFLNAGILIK--GSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG--ASIVFNGSDQCFI--AKPNSFAYT 141 (244)
T ss_dssp TCCEEEEEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE--EEEEEECCGGGTC--CCTTBHHHH
T ss_pred hCCCCEEEECCccCCC--CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC--cEEEEECCHHHcc--CCCCCchhH
Confidence 4479999999998765 678899999999999999999999999999999654 8999999999988 778899999
Q ss_pred HHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 210 asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
+||+|+++|+++|+.|++++||+||+|+||+|+|+|..
T Consensus 142 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~ 179 (244)
T 4e4y_A 142 LSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYR 179 (244)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhH
Confidence 99999999999999999999999999999999999865
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-36 Score=293.88 Aligned_cols=210 Identities=22% Similarity=0.250 Sum_probs=175.6
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
+++||+++||||++|||+++|++|+++|++|++++|+. +++..+++.+. +.++..+.+|++++.++.++++.+.++
T Consensus 319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~--g~~~~~~~~Dv~~~~~~~~~~~~~~~G 394 (604)
T 2et6_A 319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAA--GGEAWPDQHDVAKDSEAIIKNVIDKYG 394 (604)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHT--TCEEEEECCCHHHHHHHHHHHHHHHHS
T ss_pred ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhc--CCeEEEEEcChHHHHHHHHHHHHHhcC
Confidence 57799999999999999999999999999999998742 34556666554 346777888883234567788888888
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhH
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA 209 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~ 209 (320)
+ +|+||||||+... .++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++.. +.++.+.|+
T Consensus 395 ~--iDiLVnNAGi~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~--~~~~~~~Y~ 468 (604)
T 2et6_A 395 T--IDILVNNAGILRD--RSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIY--GNFGQANYS 468 (604)
T ss_dssp C--CCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHS--CCTTBHHHH
T ss_pred C--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcc--CCCCChhHH
Confidence 6 4599999998764 678899999999999999999999999999999988889999999999988 778899999
Q ss_pred HHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccC--CCCCCCHHHHHHHHHHHhC
Q 020854 210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRS--SFFVPSTDVYARAAMRWIG 270 (320)
Q Consensus 210 asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~--~~~~~~~~~~a~~i~~~l~ 270 (320)
+||+|+.+|+++|+.|++++||+||+|+||. +|+|.....+ .....+|+++|..++..+.
T Consensus 469 asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~~~~~~~~~~~pe~vA~~v~~L~s 530 (604)
T 2et6_A 469 SSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMREQDKNLYHADQVAPLLVYLGT 530 (604)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC---------CCSSCGGGTHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccccCchhhccCCCHHHHHHHHHHHhC
Confidence 9999999999999999999999999999996 9999753211 1224589999998876553
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-35 Score=258.52 Aligned_cols=179 Identities=25% Similarity=0.364 Sum_probs=158.9
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCC-CcHHHHHHHHHHHcCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG-DLDEGVERIKEAIEGL 131 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 131 (320)
||+++|||||+|||++++++|+++|++|++++|+.++. .+++ + +..+.+|++| ++++.++++.+.+++
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~---~~~~-----~--~~~~~~D~~~~~~~~~~~~~~~~~g~- 70 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEA---AQSL-----G--AVPLPTDLEKDDPKGLVKRALEALGG- 70 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH---HHHH-----T--CEEEECCTTTSCHHHHHHHHHHHHTS-
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHhh-----C--cEEEecCCchHHHHHHHHHHHHHcCC-
Confidence 78999999999999999999999999999999998762 2333 2 6778899997 346777888888876
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCC--CCchhhH
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD--PLYSVYA 209 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~--~~~~~Y~ 209 (320)
+|+||||||.... .++.+.+.++|++++++|+.|++++++.++|.|.+++.|+||++||.++.. +. ++...|+
T Consensus 71 -id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~~~Y~ 145 (239)
T 2ekp_A 71 -LHVLVHAAAVNVR--KPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFT--AGGPVPIPAYT 145 (239)
T ss_dssp -CCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CCTTSCCHHHH
T ss_pred -CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcc--CCCCCCCccHH
Confidence 5599999998754 567889999999999999999999999999999888889999999999987 45 7889999
Q ss_pred HHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 210 asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
+||+++++|+++++.|++++||+|++|+||+++|++..
T Consensus 146 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 183 (239)
T 2ekp_A 146 TAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTL 183 (239)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGH
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhh
Confidence 99999999999999999999999999999999999864
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-36 Score=291.93 Aligned_cols=211 Identities=25% Similarity=0.282 Sum_probs=177.4
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH---------HHHHHHHHHHHhhcCCceEEEEEEeCCC--Cc
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP---------DKLKDVSDSIQAKYAKTQIKSVVVDFSG--DL 117 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~---------~~~~~~~~~l~~~~~~~~~~~~~~D~~~--~~ 117 (320)
++++||+++||||++|||+++|++|+++|++|++++|+. +++++..+++.+.+ ... .+|.+| ++
T Consensus 4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g--~~~---~~d~~d~~~~ 78 (604)
T 2et6_A 4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNG--GVA---VADYNNVLDG 78 (604)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTT--CEE---EEECCCTTCH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcC--CeE---EEEcCCHHHH
Confidence 456799999999999999999999999999999998765 66777788886643 232 246665 34
Q ss_pred HHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccc
Q 020854 118 DEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAI 197 (320)
Q Consensus 118 ~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~ 197 (320)
++.++++.+.++++| +||||||+... .++.+.+.++|++++++|+.|+++++|+++|+|++++.|+||++||.++.
T Consensus 79 ~~~v~~~~~~~G~iD--iLVnNAGi~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~ 154 (604)
T 2et6_A 79 DKIVETAVKNFGTVH--VIINNAGILRD--ASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGL 154 (604)
T ss_dssp HHHHHHHHHHHSCCC--EEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred HHHHHHHHHHcCCCC--EEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHc
Confidence 678888888898655 99999998754 67889999999999999999999999999999998888999999999998
Q ss_pred ccCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCC--CCCCCHHHHHHHHHHHhCC
Q 020854 198 VIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSS--FFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 198 ~~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~--~~~~~~~~~a~~i~~~l~~ 271 (320)
. +.++.+.|++||+|+.+|+++|+.|++++||+||+|+|| ++|+|.....+. ....+||++|..++..+..
T Consensus 155 ~--~~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~~~~~~~~~~~pe~vA~~v~~L~s~ 227 (604)
T 2et6_A 155 Y--GNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESIMPPPMLEKLGPEKVAPLVLYLSSA 227 (604)
T ss_dssp H--CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTTSCHHHHTTCSHHHHHHHHHHHTSS
T ss_pred C--CCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccccCChhhhccCCHHHHHHHHHHHhCC
Confidence 8 778899999999999999999999999999999999998 689885431111 1236899999998887653
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-35 Score=260.70 Aligned_cols=190 Identities=22% Similarity=0.217 Sum_probs=161.1
Q ss_pred cccCCCEEEEECCC--CcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHH
Q 020854 49 LRKYGSWALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERI 124 (320)
Q Consensus 49 ~~~~gk~vlITGas--~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~ 124 (320)
.+++||+++||||+ +|||+++|++|+++|++|++++|+.+ .++..+++.+..+ .+..+.+|++|. +++.++++
T Consensus 4 ~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~ 80 (261)
T 2wyu_A 4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALG--GALLFRADVTQDEELDALFAGV 80 (261)
T ss_dssp ECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTT--CCEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcC--CcEEEECCCCCHHHHHHHHHHH
Confidence 34679999999999 99999999999999999999999975 4445555655432 267889999985 34556666
Q ss_pred HHHHcCCCeEEEEEccCCCCCc--cccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCC
Q 020854 125 KEAIEGLDVGVLINNVGISYPY--ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD 202 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~~~~~--~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~ 202 (320)
.+.++ ++|+||||||..... ..++.+.+.+++++++++|+.|++++++.++|.|.+ +|+||++||.++.. +.
T Consensus 81 ~~~~g--~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~--~~ 154 (261)
T 2wyu_A 81 KEAFG--GLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEK--VV 154 (261)
T ss_dssp HHHHS--SEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTS--BC
T ss_pred HHHcC--CCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc--CCEEEEEecccccC--CC
Confidence 66666 477999999986420 145778899999999999999999999999999863 58999999999987 67
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 203 ~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
++...|++||+|+++++++++.|++++||+||+|+||+++|++..
T Consensus 155 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 199 (261)
T 2wyu_A 155 PKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAAR 199 (261)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGG
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhh
Confidence 888999999999999999999999999999999999999999865
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-35 Score=257.52 Aligned_cols=193 Identities=25% Similarity=0.392 Sum_probs=168.9
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
.++++||+++||||++|||++++++|+++|++|++++|+.+++++..+++++. +.++..+.+|++|. +++.++++.
T Consensus 8 ~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (260)
T 3awd_A 8 KLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME--GHDVSSVVMDVTNTESVQNAVRSVH 85 (260)
T ss_dssp GGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999888888888664 34688999999985 245556666
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCc
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
+.+++ +|+||||||.... ..++.+.+.+++++++++|+.|++++++.+.|.|.+++.++||++||..+.. +.++.
T Consensus 86 ~~~~~--id~vi~~Ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~ 160 (260)
T 3awd_A 86 EQEGR--VDILVACAGICIS-EVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLI--VNRPQ 160 (260)
T ss_dssp HHHSC--CCEEEECCCCCCC-SCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CCSSS
T ss_pred HHcCC--CCEEEECCCCCCC-CCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcc--cCCCC
Confidence 66665 5599999998652 2567788999999999999999999999999999887889999999999987 45555
Q ss_pred --hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 206 --SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 206 --~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
..|++||++++.++++++.|++++||+|++|+||+++|++..
T Consensus 161 ~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~ 204 (260)
T 3awd_A 161 QQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTR 204 (260)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTH
T ss_pred CccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhh
Confidence 899999999999999999999999999999999999999875
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-35 Score=264.73 Aligned_cols=191 Identities=25% Similarity=0.358 Sum_probs=165.3
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
..++||+++||||++|||++++++|+++|++|++++|+.+++++..+++.+. +.++..+.+|++|. +++.++++.+
T Consensus 40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~ 117 (285)
T 2c07_A 40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGDVSKKEEISEVINKILT 117 (285)
T ss_dssp CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc--CCceeEEECCCCCHHHHHHHHHHHHH
Confidence 3477999999999999999999999999999999999999888888888654 45688899999985 2444555555
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
.+++ +|+||||||.... .++.+.+.+++++++++|+.|++++++.++|.|.+++.++||++||.++.. +.++..
T Consensus 118 ~~~~--id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~~ 191 (285)
T 2c07_A 118 EHKN--VDILVNNAGITRD--NLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLT--GNVGQA 191 (285)
T ss_dssp HCSC--CCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH--CCTTCH
T ss_pred hcCC--CCEEEECCCCCCC--CchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhcc--CCCCCc
Confidence 5554 5699999998754 567889999999999999999999999999999887789999999999987 678889
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
.|++||++++.++++++.|+++.||+|++|+||+++|++..
T Consensus 192 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 232 (285)
T 2c07_A 192 NYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTD 232 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchh
Confidence 99999999999999999999999999999999999999865
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-35 Score=261.25 Aligned_cols=194 Identities=26% Similarity=0.310 Sum_probs=154.3
Q ss_pred cccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHH
Q 020854 47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERI 124 (320)
Q Consensus 47 ~~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~ 124 (320)
..++++||+++||||++|||++++++|+++|++|++++|+.+++++..+++.+. +.++..+.+|++|. +++.++++
T Consensus 8 ~~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~ 85 (266)
T 1xq1_A 8 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGSVCDASLRPEREKLMQTV 85 (266)
T ss_dssp CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeeEEEECCCCCHHHHHHHHHHH
Confidence 345678999999999999999999999999999999999999988888888664 44688899999985 34555666
Q ss_pred HHHH-cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCC
Q 020854 125 KEAI-EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP 203 (320)
Q Consensus 125 ~~~~-~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~ 203 (320)
.+.+ ++ +|+||||||.... .++.+.+.+++++++++|+.|++++++.++|.|.+++.++||++||.++.. +.+
T Consensus 86 ~~~~~~~--id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~--~~~ 159 (266)
T 1xq1_A 86 SSMFGGK--LDILINNLGAIRS--KPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVV--SAS 159 (266)
T ss_dssp HHHHTTC--CSEEEEECCC--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-----------
T ss_pred HHHhCCC--CcEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcc--CCC
Confidence 6666 54 5699999998653 567788999999999999999999999999999888889999999999987 667
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc
Q 020854 204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI 248 (320)
Q Consensus 204 ~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~ 248 (320)
+...|++||++++.++++++.|++++||+|++|+||++.|++...
T Consensus 160 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 204 (266)
T 1xq1_A 160 VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEA 204 (266)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC------
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhh
Confidence 789999999999999999999999999999999999999998653
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-36 Score=262.31 Aligned_cols=180 Identities=27% Similarity=0.361 Sum_probs=150.9
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
.+++||+++||||++|||++++++|+++|++|++++|+.+++++ +..+.+|++|. +++.++++.+
T Consensus 11 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-------------~~~~~~D~~~~~~~~~~~~~~~~ 77 (247)
T 1uzm_A 11 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-------------LFGVEVDVTDSDAVDRAFTAVEE 77 (247)
T ss_dssp CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-------------SEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH-------------hcCeeccCCCHHHHHHHHHHHHH
Confidence 44679999999999999999999999999999999998765332 11378999985 3556666667
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
.+++ +|+||||||.... .++.+.+.+++++++++|+.|++++++.++|.|++++.|+||++||.++.. +.++..
T Consensus 78 ~~g~--id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~ 151 (247)
T 1uzm_A 78 HQGP--VEVLVSNAGLSAD--AFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLW--GIGNQA 151 (247)
T ss_dssp HHSS--CSEEEEECSCCC-------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-------CCH
T ss_pred HcCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhcc--CCCCCh
Confidence 7775 5599999998754 567889999999999999999999999999999988889999999999987 678889
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
.|++||+|+++|+++++.|++++||+||+|+||+++|++..
T Consensus 152 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~ 192 (247)
T 1uzm_A 152 NYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTR 192 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchh
Confidence 99999999999999999999999999999999999999854
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=260.81 Aligned_cols=181 Identities=23% Similarity=0.286 Sum_probs=153.6
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++++||+++||||++|||++++++|+++|++|++++|+.+. + ...+..+.+|++|. +++.++++.+
T Consensus 3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~---------~---~~~~~~~~~D~~d~~~~~~~~~~~~~ 70 (250)
T 2fwm_X 3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ---------E---QYPFATEVMDVADAAQVAQVCQRLLA 70 (250)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS---------S---CCSSEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh---------h---cCCceEEEcCCCCHHHHHHHHHHHHH
Confidence 34679999999999999999999999999999999998652 1 11267889999985 3455566666
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
.+++ +|+||||||.... .++.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.++.. +.++..
T Consensus 71 ~~g~--id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~--~~~~~~ 144 (250)
T 2fwm_X 71 ETER--LDALVNAAGILRM--GATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHT--PRIGMS 144 (250)
T ss_dssp HCSC--CCEEEECCCCCCC--CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS--CCTTCH
T ss_pred HcCC--CCEEEECCCcCCC--CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCC--CCCCCc
Confidence 6665 5699999998754 567889999999999999999999999999999888889999999999988 678899
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
.|++||+++++|+++++.|++++||+||+|+||+++|++..
T Consensus 145 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 185 (250)
T 2fwm_X 145 AYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQR 185 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------
T ss_pred hHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCcccc
Confidence 99999999999999999999999999999999999999865
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-35 Score=259.62 Aligned_cols=183 Identities=21% Similarity=0.179 Sum_probs=158.4
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCe
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV 133 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 133 (320)
|++|||||++|||+++|++|+++|++|++++|+.+++++..+ +...+ .++..+ | .+++++.++++.+.+++ +
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~--~~~~~~--d-~~~v~~~~~~~~~~~g~--i 73 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETY--PQLKPM--S-EQEPAELIEAVTSAYGQ--V 73 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHC--TTSEEC--C-CCSHHHHHHHHHHHHSC--C
T ss_pred eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcC--CcEEEE--C-HHHHHHHHHHHHHHhCC--C
Confidence 689999999999999999999999999999999988877665 65543 233333 3 33557788888888886 5
Q ss_pred EEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHHHHH
Q 020854 134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKA 213 (320)
Q Consensus 134 d~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKa 213 (320)
|+||||||.... ..++.+.+.+++++++++|+.|++++++.++|.|++++.|+||++||.++.. +.++...|++||+
T Consensus 74 D~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~Y~~sK~ 150 (254)
T 1zmt_A 74 DVLVSNDIFAPE-FQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFG--PWKELSTYTSARA 150 (254)
T ss_dssp CEEEEECCCCCC-CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTS--CCTTCHHHHHHHH
T ss_pred CEEEECCCcCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCccccc--CCCCchHHHHHHH
Confidence 599999998622 2567889999999999999999999999999999888889999999999988 6788999999999
Q ss_pred HHHHHHHHHHHHHccCCceEEEEeccce---------ecCCCc
Q 020854 214 YIDQFSRSLYVEYRKSGIDVQCQVPLYV---------ATKMAS 247 (320)
Q Consensus 214 al~~~~~~l~~el~~~gi~v~~v~PG~v---------~T~~~~ 247 (320)
++++|+++++.|++++||+||+|+||++ +|++..
T Consensus 151 a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~ 193 (254)
T 1zmt_A 151 GACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWK 193 (254)
T ss_dssp HHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHT
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccc
Confidence 9999999999999999999999999999 777654
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-35 Score=259.90 Aligned_cols=188 Identities=18% Similarity=0.164 Sum_probs=156.7
Q ss_pred cCCCEEEEECCC--CcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 51 KYGSWALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 51 ~~gk~vlITGas--~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++||++|||||+ +|||+++|++|+++|++|++++|+. +.++..+++.+..+. ...+++|++|. +++.++++.+
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~--~~~~~~D~~~~~~v~~~~~~~~~ 83 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGS--DIVLQCDVAEDASIDTMFAELGK 83 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTC--CCEEECCTTCHHHHHHHHHHHHT
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCC--cEEEEccCCCHHHHHHHHHHHHH
Confidence 569999999999 9999999999999999999999987 455555666554333 37789999985 2333333333
Q ss_pred HHcCCCeEEEEEccCCCCCc--cccccC-CCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCC
Q 020854 127 AIEGLDVGVLINNVGISYPY--ARFFHE-VDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP 203 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~--~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~ 203 (320)
.++ ++|+||||||..... ..++.+ .+.+++++++++|+.|+++++++++|.|.+ +|+||++||.++.. +.+
T Consensus 84 ~~g--~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~--~~~ 157 (265)
T 1qsg_A 84 VWP--KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAER--AIP 157 (265)
T ss_dssp TCS--SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTS--BCT
T ss_pred HcC--CCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEcchhhcc--CCC
Confidence 333 588999999986421 135667 899999999999999999999999999864 58999999999987 677
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 204 ~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
+...|++||+|+++|+++++.|++++||+||+|+||+++|++..
T Consensus 158 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~ 201 (265)
T 1qsg_A 158 NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAAS 201 (265)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGG
T ss_pred CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhh
Confidence 88999999999999999999999999999999999999999865
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-35 Score=259.17 Aligned_cols=211 Identities=20% Similarity=0.190 Sum_probs=173.0
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++++||+++||||++|||++++++|+++|++|++++|+.+++++..+++ +.++.++++|++|. +++.++++.+
T Consensus 8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (265)
T 2o23_A 8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----GNNCVFAPADVTSEKDVQTALALAKG 82 (265)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 4577999999999999999999999999999999999998887776665 34688899999985 3556666666
Q ss_pred HHcCCCeEEEEEccCCCCCcccccc------CCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC------CCcEEEEEcCc
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFH------EVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR------KKGAIVNIGSG 194 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~------~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~------~~g~Iv~vsS~ 194 (320)
.+++ +|+||||||.... .++. +.+.+++++++++|+.+++.+++.+.|.|.++ +.++||++||.
T Consensus 83 ~~g~--id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~ 158 (265)
T 2o23_A 83 KFGR--VDVAVNCAGIAVA--SKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASV 158 (265)
T ss_dssp HHSC--CCEEEECCCCCCC--CCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCT
T ss_pred HCCC--CCEEEECCccCCC--CccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCCh
Confidence 7765 5599999998654 2222 47889999999999999999999999999877 67999999999
Q ss_pred cccccCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc-----------cCC-CCCCCHHHHH
Q 020854 195 AAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK-----------RSS-FFVPSTDVYA 262 (320)
Q Consensus 195 ~~~~~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~-----------~~~-~~~~~~~~~a 262 (320)
.+.. +.++...|++||++++.++++++.|++++||+|++|+||+++|++.... .+. ....+|+++|
T Consensus 159 ~~~~--~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva 236 (265)
T 2o23_A 159 AAFE--GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYA 236 (265)
T ss_dssp HHHH--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSSSCSCBCHHHHH
T ss_pred hhcC--CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHHHHHHHHHcCCCcCCCCCHHHHH
Confidence 9988 6788899999999999999999999999999999999999999986531 111 2344667777
Q ss_pred HHHHHHhC
Q 020854 263 RAAMRWIG 270 (320)
Q Consensus 263 ~~i~~~l~ 270 (320)
+.++..+.
T Consensus 237 ~~~~~l~~ 244 (265)
T 2o23_A 237 HLVQAIIE 244 (265)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 76666553
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-35 Score=257.93 Aligned_cols=212 Identities=23% Similarity=0.313 Sum_probs=178.3
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeC-CHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
++||+++||||++|||++++++|+++|++|++++| +.+++++..+++.+. +.++..+.+|++|. +++.++++.+.
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (261)
T 1gee_A 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV--GGEAIAVKGDVTVESDVINLVQSAIKE 82 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 56999999999999999999999999999999999 888888887877654 45688999999985 34556666666
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccccCCCCCch
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
+++ +|+||||||.... .++.+.+.+++++++++|+.|++++++.++|.|.+++ .++||++||..+.. +.++..
T Consensus 83 ~g~--id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~~ 156 (261)
T 1gee_A 83 FGK--LDVMINNAGLENP--VSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI--PWPLFV 156 (261)
T ss_dssp HSC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS--CCTTCH
T ss_pred cCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcC--CCCCcc
Confidence 765 5599999998754 5677889999999999999999999999999998877 79999999999987 678889
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc-------------cCCCCCCCHHHHHHHHHHHhC
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK-------------RSSFFVPSTDVYARAAMRWIG 270 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~-------------~~~~~~~~~~~~a~~i~~~l~ 270 (320)
.|++||+|++.++++++.|++++||+|++|+||+++|++.... .+.....+|+++|+.++..+.
T Consensus 157 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 233 (261)
T 1gee_A 157 HYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLAS 233 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999986421 111223466666666666553
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-35 Score=259.87 Aligned_cols=181 Identities=25% Similarity=0.327 Sum_probs=153.6
Q ss_pred CcccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHH
Q 020854 46 AKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIK 125 (320)
Q Consensus 46 ~~~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 125 (320)
+....++||+++||||++|||+++|++|+++|++|++++|+.+..++ + + .+..+ +|+.++ ++++.
T Consensus 12 ~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~----~-----~-~~~~~-~D~~~~----~~~~~ 76 (249)
T 1o5i_A 12 HMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR----S-----G-HRYVV-CDLRKD----LDLLF 76 (249)
T ss_dssp ----CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH----T-----C-SEEEE-CCTTTC----HHHHH
T ss_pred hHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHh----h-----C-CeEEE-eeHHHH----HHHHH
Confidence 33445779999999999999999999999999999999999843322 1 2 45666 898433 34444
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCc
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
+.+. ++|+||||||.... .++.+.+.+++++++++|+.|++.+++.++|.|++++.|+||++||.++.. +.++.
T Consensus 77 ~~~~--~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~ 150 (249)
T 1o5i_A 77 EKVK--EVDILVLNAGGPKA--GFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVIS--PIENL 150 (249)
T ss_dssp HHSC--CCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CCTTB
T ss_pred HHhc--CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcC--CCCCC
Confidence 4444 46799999998654 567889999999999999999999999999999988889999999999988 67889
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
..|++||+++++|+++++.|++++||+|++|+||+++|++..
T Consensus 151 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 192 (249)
T 1o5i_A 151 YTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVK 192 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHH
T ss_pred chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCccc
Confidence 999999999999999999999999999999999999999864
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-36 Score=263.49 Aligned_cols=209 Identities=20% Similarity=0.235 Sum_probs=148.7
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
+++||++|||||++|||+++|++|++ |++|++++|+.+++++..+ ...+..+.+|+++. ...+.+.+.+.
T Consensus 2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~--~~~~~~~~~~~ 71 (245)
T 3e9n_A 2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-------IEGVEPIESDIVKE--VLEEGGVDKLK 71 (245)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-------STTEEEEECCHHHH--HHTSSSCGGGT
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-------hcCCcceecccchH--HHHHHHHHHHH
Confidence 45699999999999999999999998 9999999999988766543 23477888988754 11222222222
Q ss_pred CC-CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 130 GL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 130 ~~-~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
.. ++|+||||||.... .++.+.+.+++++++++|+.|++++++.++|.|++++ |+||++||.++.. +.++.+.|
T Consensus 72 ~~~~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~--~~~~~~~Y 146 (245)
T 3e9n_A 72 NLDHVDTLVHAAAVARD--TTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNG--PHPGNTIY 146 (245)
T ss_dssp TCSCCSEEEECC------------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC------------CHHH
T ss_pred hcCCCCEEEECCCcCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCccccc--CCCCchHH
Confidence 22 47799999998764 5678889999999999999999999999999997754 9999999999988 77889999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc-------cCCCCCCCHHHHHHHHHHHhCCCC
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK-------RSSFFVPSTDVYARAAMRWIGYEP 273 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~-------~~~~~~~~~~~~a~~i~~~l~~~~ 273 (320)
++||+|+++|+++|+.|++++||+|++|+||+++|+|.... .+.....+|+++|+.++..+..+.
T Consensus 147 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~dvA~~i~~l~~~~~ 218 (245)
T 3e9n_A 147 AASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQGTNFRPEIYIEPKEIANAIRFVIDAGE 218 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------CCGGGSCHHHHHHHHHHHHTSCT
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhhhhcccccccCCCHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999997631 122235799999999999987763
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-35 Score=255.99 Aligned_cols=189 Identities=28% Similarity=0.402 Sum_probs=165.4
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHc
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIE 129 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~ 129 (320)
++|+++||||++|||++++++|+++|++|++++|+.+++++..+++.+.. +.++..+.+|++|. +++.++++.+.++
T Consensus 1 ~~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (250)
T 2cfc_A 1 MSRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAY-ADKVLRVRADVADEGDVNAAIAATMEQFG 79 (250)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTT-GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 37899999999999999999999999999999999998888777762221 34688999999985 3456666666776
Q ss_pred CCCeEEEEEccCCCCCcccc---ccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 130 GLDVGVLINNVGISYPYARF---FHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~---~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
+ +|+||||||.... .+ +.+.+.+++++++++|+.|++.+++.++|.|.+++.++||++||.++.. +.++..
T Consensus 80 ~--id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~~ 153 (250)
T 2cfc_A 80 A--IDVLVNNAGITGN--SEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLV--AFPGRS 153 (250)
T ss_dssp C--CCEEEECCCCCCC--TTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CCTTCH
T ss_pred C--CCEEEECCCCCCC--CCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhcc--CCCCch
Confidence 5 5599999998653 33 7788999999999999999999999999999888889999999999987 678889
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
.|++||++++.++++++.|++++||+|++|+||+++|++..
T Consensus 154 ~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~ 194 (250)
T 2cfc_A 154 AYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQ 194 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTH
T ss_pred hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccc
Confidence 99999999999999999999999999999999999999865
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-34 Score=257.34 Aligned_cols=219 Identities=24% Similarity=0.294 Sum_probs=179.8
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||++|||||++|||++++++|+++|++|++++|+.+++++..+++.+.+....+..+.+|++|. +++.++++.+.
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 108 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ 108 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 4679999999999999999999999999999999999999988888887765446788999999985 34555666666
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCC--cEEEEEcCccccccCCCCCc
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKK--GAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~--g~Iv~vsS~~~~~~~~~~~~ 205 (320)
+++ +|+||||||.... .++.+.+.+++++++++|+.+++.+++.++|.|++++. |+||++||..+....+.++.
T Consensus 109 ~g~--iD~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~ 184 (279)
T 1xg5_A 109 HSG--VDICINNAGLARP--DTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVT 184 (279)
T ss_dssp HCC--CSEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGG
T ss_pred CCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCC
Confidence 765 5599999998754 56778899999999999999999999999999988763 89999999998732256778
Q ss_pred hhhHHHHHHHHHHHHHHHHHHc--cCCceEEEEeccceecCCCcccc-----------CCCCCCCHHHHHHHHHHHhCCC
Q 020854 206 SVYAATKAYIDQFSRSLYVEYR--KSGIDVQCQVPLYVATKMASIKR-----------SSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~--~~gi~v~~v~PG~v~T~~~~~~~-----------~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
..|++||++++.|+++++.|++ +.||+|++|+||+++|++..... +.....+|+++|+.++..+..+
T Consensus 185 ~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~i~~l~~~~ 264 (279)
T 1xg5_A 185 HFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVLSTP 264 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC---CBCHHHHHHHHHHHHHSC
T ss_pred chhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHhhhcccccCCCHHHHHHHHHHHhcCC
Confidence 8999999999999999999998 88999999999999999843110 1112345666666666655443
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-35 Score=260.65 Aligned_cols=178 Identities=20% Similarity=0.310 Sum_probs=158.6
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||++|||||++|||++++++|+++|++|++++|+.++ +.++..+.+|++|. +++.++++.+.
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 71 (264)
T 2dtx_A 5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-------------EAKYDHIECDVTNPDQVKASIDHIFKE 71 (264)
T ss_dssp GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-------------SCSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-------------CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 3569999999999999999999999999999999998754 23577889999984 35566677777
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
+++ +|+||||||.... .++.+.+.+++++++++|+.|++.+++.++|.|++++.|+||++||.++.. +.++...
T Consensus 72 ~g~--iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~ 145 (264)
T 2dtx_A 72 YGS--ISVLVNNAGIESY--GKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASI--ITKNASA 145 (264)
T ss_dssp HSC--CCEEEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTS--CCTTBHH
T ss_pred cCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhcc--CCCCchh
Confidence 775 5599999998754 668889999999999999999999999999999888889999999999987 6788999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
|++||+++++|+++++.|+++. |+||+|+||+++|++..
T Consensus 146 Y~~sK~a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~ 184 (264)
T 2dtx_A 146 YVTSKHAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVR 184 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchh
Confidence 9999999999999999999988 99999999999999854
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-36 Score=276.11 Aligned_cols=232 Identities=13% Similarity=0.066 Sum_probs=180.4
Q ss_pred CCCEEEEECCCC--cHHHHHHHHHHHcCCeEEEEeCCHH---------HHHHHHHHHHh-hcCCceEEEEEEeCCCC---
Q 020854 52 YGSWALVTGPTD--GIGKSFAFQLAKTGLNLVLVGRNPD---------KLKDVSDSIQA-KYAKTQIKSVVVDFSGD--- 116 (320)
Q Consensus 52 ~gk~vlITGas~--GIG~ala~~l~~~G~~Vil~~r~~~---------~~~~~~~~l~~-~~~~~~~~~~~~D~~~~--- 116 (320)
++|++|||||++ |||+++|++|+++|++|++++|+.. +++...+.... ......+..+++|+++.
T Consensus 1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~ 80 (329)
T 3lt0_A 1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN 80 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence 479999999986 9999999999999999998877652 22222111111 11123478889998864
Q ss_pred -------------------cHHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHh
Q 020854 117 -------------------LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVL 177 (320)
Q Consensus 117 -------------------~~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 177 (320)
+++.++++.+.+++ +|+||||||+......++.+.+.++|++++++|+.|++++++.++
T Consensus 81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~--iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 158 (329)
T 3lt0_A 81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGK--INMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFV 158 (329)
T ss_dssp GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCC--EEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred hhhhhhcccccccccCHHHHHHHHHHHHHhcCC--CcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 25667777777774 779999999854334678899999999999999999999999999
Q ss_pred HhhhcCCCcEEEEEcCccccccCCCCCch-hhHHHHHHHHHHHHHHHHHHcc-CCceEEEEeccceecCCCccccCCC--
Q 020854 178 PGMLKRKKGAIVNIGSGAAIVIPSDPLYS-VYAATKAYIDQFSRSLYVEYRK-SGIDVQCQVPLYVATKMASIKRSSF-- 253 (320)
Q Consensus 178 ~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~-~Y~asKaal~~~~~~l~~el~~-~gi~v~~v~PG~v~T~~~~~~~~~~-- 253 (320)
|+|+++ |+||++||.++.. +.++.. .|++||+|+.+|+++|+.|+++ +||+||+|+||+|+|+|........
T Consensus 159 p~m~~~--g~Iv~isS~~~~~--~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~ 234 (329)
T 3lt0_A 159 NIMKPQ--SSIISLTYHASQK--VVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNT 234 (329)
T ss_dssp GGEEEE--EEEEEEECGGGTS--CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC-----
T ss_pred HHHhhC--CeEEEEeCccccC--CCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhccc
Confidence 999765 9999999999988 678885 9999999999999999999998 8999999999999999976421000
Q ss_pred ----------------------CCC-------------CHHHHHHHHHHHhCCCCcccCCchHHHHHHHHh
Q 020854 254 ----------------------FVP-------------STDVYARAAMRWIGYEPCCTPYWPHSFIWGVLS 289 (320)
Q Consensus 254 ----------------------~~~-------------~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l~~ 289 (320)
... -.++..+......+.++...|++++.++.||++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~fL~s 305 (329)
T 3lt0_A 235 YENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLS 305 (329)
T ss_dssp -------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHS
T ss_pred ccccccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHHHHHHHHHhC
Confidence 000 012235556667777888888888888888775
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-34 Score=255.14 Aligned_cols=216 Identities=24% Similarity=0.272 Sum_probs=180.1
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
..+++||+++||||++|||++++++|+++|++|++++|+.++.++..+++.. ..++.++.+|++|. +++.++++.
T Consensus 11 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~ 87 (278)
T 2bgk_A 11 TNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS---PDVISFVHCDVTKDEDVRNLVDTTI 87 (278)
T ss_dssp CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred cccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC---CCceEEEECCCCCHHHHHHHHHHHH
Confidence 3457799999999999999999999999999999999998887776666522 23688999999985 345566666
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCC-C
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP-L 204 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~-~ 204 (320)
+.+++ +|+||||||.......++.+.+.+++++++++|+.|++++++.++|.|.+++.|+||++||..+.. +.+ +
T Consensus 88 ~~~~~--id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~ 163 (278)
T 2bgk_A 88 AKHGK--LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFT--AGEGV 163 (278)
T ss_dssp HHHSC--CCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTC--CCTTS
T ss_pred HHcCC--CCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccC--CCCCC
Confidence 66765 559999999875433567788999999999999999999999999999988889999999999987 556 7
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcccc----------------CCCCCCCHHHHHHHHHHH
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKR----------------SSFFVPSTDVYARAAMRW 268 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~----------------~~~~~~~~~~~a~~i~~~ 268 (320)
...|++||++++.++++++.|++++||+|++|+||++.|++..... +.....+|+++|+.++..
T Consensus 164 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l 243 (278)
T 2bgk_A 164 SHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYL 243 (278)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHHHHHHHHHHH
Confidence 8899999999999999999999999999999999999999865311 112256777777777776
Q ss_pred hC
Q 020854 269 IG 270 (320)
Q Consensus 269 l~ 270 (320)
+.
T Consensus 244 ~~ 245 (278)
T 2bgk_A 244 AG 245 (278)
T ss_dssp HS
T ss_pred cC
Confidence 64
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=254.21 Aligned_cols=192 Identities=30% Similarity=0.492 Sum_probs=167.9
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++++||+++||||++|||++++++|+++|++|++++|+.+++++..+++.+.. +.++..+.+|++|. +++.++++.+
T Consensus 3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (248)
T 2pnf_A 3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKY-GVKAHGVEMNLLSEESINKAFEEIYN 81 (248)
T ss_dssp CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhc-CCceEEEEccCCCHHHHHHHHHHHHH
Confidence 45679999999999999999999999999999999999998888877776532 34688899999985 2445555666
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
.+++ +|+||||||.... .++.+.+.+++++++++|+.|++++++.++|.|.+++.++||++||..+.. +.++..
T Consensus 82 ~~~~--~d~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~ 155 (248)
T 2pnf_A 82 LVDG--IDILVNNAGITRD--KLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFT--GNVGQV 155 (248)
T ss_dssp HSSC--CSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHH--CCTTCH
T ss_pred hcCC--CCEEEECCCCCCC--CccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcC--CCCCCc
Confidence 6665 5599999998754 567788999999999999999999999999999887889999999998887 667889
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
.|++||++++.++++++.|+++.||+|++|+||+++|++..
T Consensus 156 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~ 196 (248)
T 2pnf_A 156 NYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTA 196 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGG
T ss_pred hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhh
Confidence 99999999999999999999999999999999999999865
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=255.30 Aligned_cols=188 Identities=29% Similarity=0.446 Sum_probs=163.2
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceE-EEEEEeCCCC--cHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQI-KSVVVDFSGD--LDEGVERI 124 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~-~~~~~D~~~~--~~~~~~~~ 124 (320)
.++++||+++||||++|||++++++|+++|++|++++|+.+++++..+++ +.++ ..+.+|++|. +++.++++
T Consensus 6 ~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (254)
T 2wsb_A 6 VFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL-----GAAVAARIVADVTDAEAMTAAAAEA 80 (254)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEEECCTTCHHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cccceeEEEEecCCHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999998888777666 2345 8899999985 23444444
Q ss_pred HHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCC
Q 020854 125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL 204 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~ 204 (320)
.+ +++ +|+||||||.... .++.+.+.+++++++++|+.|++++++.++|.|++++.++||++||.++.. +.+.
T Consensus 81 ~~-~~~--id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~ 153 (254)
T 2wsb_A 81 EA-VAP--VSILVNSAGIARL--HDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTI--VNRP 153 (254)
T ss_dssp HH-HSC--CCEEEECCCCCCC--BCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CCSS
T ss_pred Hh-hCC--CcEEEECCccCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhcc--CCCC
Confidence 44 554 6699999998754 567788999999999999999999999999999888889999999999987 5566
Q ss_pred c--hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 205 Y--SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 205 ~--~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
. ..|++||++++.++++++.|++++||+|++|+||+++|++..
T Consensus 154 ~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~ 198 (254)
T 2wsb_A 154 QFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTL 198 (254)
T ss_dssp SCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHH
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhh
Confidence 6 899999999999999999999999999999999999999864
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-35 Score=254.31 Aligned_cols=187 Identities=28% Similarity=0.400 Sum_probs=164.7
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEE-EeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHc
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIE 129 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~ 129 (320)
||+++||||++|||++++++|+++|++|++ .+|+.++.++..+++.+. +.++..+.+|++|. +++.++++.+.++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY--GGQAITFGGDVSKEADVEAMMKTAIDAWG 78 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--TCEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 689999999999999999999999999999 589998888887777654 34688899999985 2455556666666
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhH
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA 209 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~ 209 (320)
+ +|+||||||.... .++.+.+.+++++++++|+.|++++++.+.|.|.+++.++||++||.++.. +.++...|+
T Consensus 79 ~--id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~Y~ 152 (244)
T 1edo_A 79 T--IDVVVNNAGITRD--TLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLI--GNIGQANYA 152 (244)
T ss_dssp C--CSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH--CCTTCHHHH
T ss_pred C--CCEEEECCCCCCC--cCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcC--CCCCCccch
Confidence 4 5599999998764 567788999999999999999999999999999887889999999999987 678889999
Q ss_pred HHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 210 asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
+||++++.++++++.|+++.||+|++|+||+++|++..
T Consensus 153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 190 (244)
T 1edo_A 153 AAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTA 190 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHH
T ss_pred hhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhh
Confidence 99999999999999999999999999999999999864
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=255.82 Aligned_cols=228 Identities=22% Similarity=0.271 Sum_probs=180.7
Q ss_pred cccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHH
Q 020854 47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERI 124 (320)
Q Consensus 47 ~~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~ 124 (320)
..++++||+++||||++|||++++++|+++|++|++++|+.++.++..+++.+.. +.++..+.+|++|. +++.++++
T Consensus 8 ~~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~ 86 (265)
T 1h5q_A 8 FTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVSNTDIVTKTIQQI 86 (265)
T ss_dssp EEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH-TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhc-CCeeEEEEeeCCCHHHHHHHHHHH
Confidence 4556789999999999999999999999999999999998776666666665443 45688999999985 24445555
Q ss_pred HHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccccCCCC
Q 020854 125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDP 203 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~~~~~ 203 (320)
.+.++ ++|+||||||.... .++.+.+.+++++++++|+.|++++++.++|.|.+++ .++||++||..+.. +.+
T Consensus 87 ~~~~~--~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~ 160 (265)
T 1h5q_A 87 DADLG--PISGLIANAGVSVV--KPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQI--INQ 160 (265)
T ss_dssp HHHSC--SEEEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS--CCE
T ss_pred HHhcC--CCCEEEECCCcCCC--CchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhc--ccc
Confidence 55555 47899999998764 5677889999999999999999999999999998765 49999999998876 332
Q ss_pred C-------chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCccc
Q 020854 204 L-------YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCT 276 (320)
Q Consensus 204 ~-------~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~ 276 (320)
. ...|++||++++.++++++.|++++||+|++|+||+++|++.... .+ +..+......+.++...
T Consensus 161 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-------~~-~~~~~~~~~~~~~~~~~ 232 (265)
T 1h5q_A 161 SSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM-------DK-KIRDHQASNIPLNRFAQ 232 (265)
T ss_dssp EETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS-------CH-HHHHHHHHTCTTSSCBC
T ss_pred ccccccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc-------ch-hHHHHHHhcCcccCCCC
Confidence 2 688999999999999999999999999999999999999987631 12 22223333344445667
Q ss_pred CCchHHHHHHHHh
Q 020854 277 PYWPHSFIWGVLS 289 (320)
Q Consensus 277 ~~~~~~~~~~l~~ 289 (320)
|++....+.++++
T Consensus 233 ~~dva~~~~~l~~ 245 (265)
T 1h5q_A 233 PEEMTGQAILLLS 245 (265)
T ss_dssp GGGGHHHHHHHHS
T ss_pred HHHHHHHHHhhcc
Confidence 7777776666543
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-34 Score=254.87 Aligned_cols=217 Identities=22% Similarity=0.259 Sum_probs=177.7
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhc-----CCceEEEEEEeCCCC--cHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKY-----AKTQIKSVVVDFSGD--LDEGVE 122 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~~D~~~~--~~~~~~ 122 (320)
+++||+++||||++|||++++++|+++|++|++++|+.+++++..+++.+.+ +..++..+.+|++|. +++.++
T Consensus 4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 83 (264)
T 2pd6_A 4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE 83 (264)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence 3569999999999999999999999999999999999998887776665432 114678899999984 355666
Q ss_pred HHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccccCC
Q 020854 123 RIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPS 201 (320)
Q Consensus 123 ~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~~~ 201 (320)
.+.+.+++. +|+||||||.... .++.+.+.+++++++++|+.|++++++.+.|.|.+++ .|+||++||.++.. +
T Consensus 84 ~~~~~~g~i-~d~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~--~ 158 (264)
T 2pd6_A 84 QVQACFSRP-PSVVVSCAGITQD--EFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKV--G 158 (264)
T ss_dssp HHHHHHSSC-CSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH--C
T ss_pred HHHHHhCCC-CeEEEECCCcCCC--cchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhcc--C
Confidence 677777754 1599999998754 5678889999999999999999999999999998766 78999999999887 6
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc-----------cCCCCCCCHHHHHHHHHHHhC
Q 020854 202 DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK-----------RSSFFVPSTDVYARAAMRWIG 270 (320)
Q Consensus 202 ~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~-----------~~~~~~~~~~~~a~~i~~~l~ 270 (320)
.++...|++||++++.++++++.|++++||+|++|+||++.|++.... .+.....+|+++|+.++..+.
T Consensus 159 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 238 (264)
T 2pd6_A 159 NVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIPMGHLGDPEDVADVVAFLAS 238 (264)
T ss_dssp CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC----------CTGGGCTTCSCBCHHHHHHHHHHHHS
T ss_pred CCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCHHHHHHHHHhCCCCCCCCHHHHHHHHHHHcC
Confidence 788999999999999999999999999999999999999999986521 111234578888888887765
Q ss_pred C
Q 020854 271 Y 271 (320)
Q Consensus 271 ~ 271 (320)
.
T Consensus 239 ~ 239 (264)
T 2pd6_A 239 E 239 (264)
T ss_dssp G
T ss_pred C
Confidence 3
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-34 Score=253.15 Aligned_cols=191 Identities=28% Similarity=0.342 Sum_probs=167.3
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
.++++||+++||||+||||++++++|+++|++|++++|+.+++++..+++... +.++..+.+|++|. +++.++++.
T Consensus 6 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~ 83 (255)
T 1fmc_A 6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFAI 83 (255)
T ss_dssp GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh--CCceEEEEcCCCCHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999888888888664 34678899999985 245556666
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCc
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
+.+++ +|+||||||.... .++ +.+.+++++++++|+.|++++++.++|.|.+++.++||++||..+.. +.++.
T Consensus 84 ~~~~~--~d~vi~~Ag~~~~--~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~ 156 (255)
T 1fmc_A 84 SKLGK--VDILVNNAGGGGP--KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN--KNINM 156 (255)
T ss_dssp HHHSS--CCEEEECCCCCCC--CCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC--CCTTC
T ss_pred HhcCC--CCEEEECCCCCCC--CCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcC--CCCCC
Confidence 66665 5599999998754 344 67899999999999999999999999999887889999999999987 66788
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
..|++||++++.++++++.|+++.||++++|+||++.|++..
T Consensus 157 ~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~ 198 (255)
T 1fmc_A 157 TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALK 198 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhh
Confidence 999999999999999999999999999999999999998754
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-34 Score=255.68 Aligned_cols=226 Identities=16% Similarity=0.160 Sum_probs=183.4
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||+++||||++|||++++++|+++|++|++++|+.++.++..+++.+. +.++..+.+|++|. +++.++++.+.
T Consensus 31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 108 (279)
T 3ctm_A 31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY--GVHSKAYKCNISDPKSVEETISQQEKD 108 (279)
T ss_dssp CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHH--CSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcceEEEeecCCHHHHHHHHHHHHHH
Confidence 477999999999999999999999999999999999988777776666554 45688899999984 34556666666
Q ss_pred HcCCCeEEEEEccCCCCCcccccc-CCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 128 IEGLDVGVLINNVGISYPYARFFH-EVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~-~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
+++ +|+||||||.... ..++. +.+.+++++++++|+.|++.+++.++|.|.+++.++||++||.++..+...++..
T Consensus 109 ~g~--id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~ 185 (279)
T 3ctm_A 109 FGT--IDVFVANAGVTWT-QGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQA 185 (279)
T ss_dssp HSC--CSEEEECGGGSTT-C--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHH
T ss_pred hCC--CCEEEECCccccc-CCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCcc
Confidence 765 5599999998643 13455 7788999999999999999999999999988888999999999998721167789
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHH
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWG 286 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~ 286 (320)
.|++||++++.++++++.|++++| +|++|+||+++|++... .. ++..+.+....+.++...|.+....+.+
T Consensus 186 ~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~-------~~-~~~~~~~~~~~p~~~~~~~~dvA~~~~~ 256 (279)
T 3ctm_A 186 PYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDF-------AS-KDMKAKWWQLTPLGREGLTQELVGGYLY 256 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSS-------CC-HHHHHHHHHHSTTCSCBCGGGTHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccc-------cC-hHHHHHHHHhCCccCCcCHHHHHHHHHH
Confidence 999999999999999999999999 99999999999999742 12 3333444455556677788888887777
Q ss_pred HHh
Q 020854 287 VLS 289 (320)
Q Consensus 287 l~~ 289 (320)
+++
T Consensus 257 l~s 259 (279)
T 3ctm_A 257 LAS 259 (279)
T ss_dssp HHS
T ss_pred HhC
Confidence 654
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-35 Score=256.57 Aligned_cols=190 Identities=27% Similarity=0.405 Sum_probs=147.1
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEE-eCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
+++||+++||||++|||++++++|+++|++|+++ +|+.+++++..+++.+. +.++..+.+|++|. +++.++++.+
T Consensus 2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (247)
T 2hq1_A 2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAA--GINVVVAKGDVKNPEDVENMVKTAMD 79 (247)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHT--TCCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 3569999999999999999999999999999998 67777777777777654 45688999999985 3455566666
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
.+++ +|+||||||.... .++.+.+.+++++++++|+.|++++++.++|.|.+++.++||++||.++.. +.++..
T Consensus 80 ~~~~--~d~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~ 153 (247)
T 2hq1_A 80 AFGR--IDILVNNAGITRD--TLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGII--GNAGQA 153 (247)
T ss_dssp HHSC--CCEEEECC-----------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC-----------CH
T ss_pred hcCC--CCEEEECCCCCCC--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcc--CCCCCc
Confidence 6665 5599999998653 556778889999999999999999999999999887889999999998887 667889
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
.|++||++++.++++++.|+++.||+|++|+||+++|++..
T Consensus 154 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 194 (247)
T 2hq1_A 154 NYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTD 194 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchh
Confidence 99999999999999999999999999999999999999754
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=254.42 Aligned_cols=211 Identities=23% Similarity=0.299 Sum_probs=175.9
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
++||+++||||++|||++++++|+++|++|++++|+.+++++..+++.. ..++..+.+|++|. +++.++++.+.+
T Consensus 4 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (251)
T 1zk4_A 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT---PDQIQFFQHDSSDEDGWTKLFDATEKAF 80 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc---cCceEEEECCCCCHHHHHHHHHHHHHHh
Confidence 5699999999999999999999999999999999999888877766632 24688999999985 345566666667
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCC-cEEEEEcCccccccCCCCCchh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~-g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
++ +|+||||||.... .++.+.+.+++++++++|+.|++.+++.++|.|.+++. ++||++||.++.. +.++...
T Consensus 81 ~~--id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~~~ 154 (251)
T 1zk4_A 81 GP--VSTLVNNAGIAVN--KSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFV--GDPSLGA 154 (251)
T ss_dssp SS--CCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTS--CCTTCHH
T ss_pred CC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhcc--CCCCCcc
Confidence 65 5599999998754 56788899999999999999999999999999988776 8999999999987 6788899
Q ss_pred hHHHHHHHHHHHHHHHHHHc--cCCceEEEEeccceecCCCccc------------cCCCCCCCHHHHHHHHHHHhC
Q 020854 208 YAATKAYIDQFSRSLYVEYR--KSGIDVQCQVPLYVATKMASIK------------RSSFFVPSTDVYARAAMRWIG 270 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~--~~gi~v~~v~PG~v~T~~~~~~------------~~~~~~~~~~~~a~~i~~~l~ 270 (320)
|++||++++.++++++.|+. +.||+|++|+||+++|++.... .+.....+|+++|+.++..+.
T Consensus 155 Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 231 (251)
T 1zk4_A 155 YNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLAS 231 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHHS
T ss_pred chHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCchhhhHHHhhcCCCCCCcCHHHHHHHHHHHcC
Confidence 99999999999999999998 8899999999999999986421 011123466666666666554
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-35 Score=252.98 Aligned_cols=202 Identities=18% Similarity=0.088 Sum_probs=165.4
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
+++||+++||||++|||+++|++|+++|++|++++|+.+ +|++|. +.++++.++++
T Consensus 3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~----------------------~D~~~~--~~v~~~~~~~g 58 (223)
T 3uce_A 3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG----------------------LDISDE--KSVYHYFETIG 58 (223)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT----------------------CCTTCH--HHHHHHHHHHC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc----------------------cCCCCH--HHHHHHHHHhC
Confidence 356999999999999999999999999999999999864 788876 67777777775
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhH
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA 209 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~ 209 (320)
++|+||||||...+ ..++.+.+.+++++++++|+.|++++++.++|.|++ +|+||++||.++.. +.++...|+
T Consensus 59 --~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~~sS~~~~~--~~~~~~~Y~ 131 (223)
T 3uce_A 59 --AFDHLIVTAGSYAP-AGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ--GGSITLTSGMLSRK--VVANTYVKA 131 (223)
T ss_dssp --SEEEEEECCCCCCC-CSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE--EEEEEEECCGGGTS--CCTTCHHHH
T ss_pred --CCCEEEECCCCCCC-CCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC--CeEEEEecchhhcc--CCCCchHHH
Confidence 47799999998743 367889999999999999999999999999999964 58999999999988 778899999
Q ss_pred HHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHHH
Q 020854 210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVL 288 (320)
Q Consensus 210 asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l~ 288 (320)
+||+|+++|+++|+.|+++ |+||+|+||+++|++...... ...++..+......+.++...|++....+.++.
T Consensus 132 asK~a~~~~~~~la~e~~~--i~vn~v~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~ 204 (223)
T 3uce_A 132 AINAAIEATTKVLAKELAP--IRVNAISPGLTKTEAYKGMNA----DDRDAMYQRTQSHLPVGKVGEASDIAMAYLFAI 204 (223)
T ss_dssp HHHHHHHHHHHHHHHHHTT--SEEEEEEECSBCSGGGTTSCH----HHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcchhhhhcch----hhHHHHHHHHhhcCCCCCccCHHHHHHHHHHHc
Confidence 9999999999999999987 999999999999998763110 012223334444555556666666666555544
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-35 Score=260.19 Aligned_cols=227 Identities=17% Similarity=0.176 Sum_probs=177.2
Q ss_pred cCCCEEEEECC--CCcHHHHHHHHHHHcCCeEEEEeCCHHH-HHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHH
Q 020854 51 KYGSWALVTGP--TDGIGKSFAFQLAKTGLNLVLVGRNPDK-LKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 51 ~~gk~vlITGa--s~GIG~ala~~l~~~G~~Vil~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
++||+++|||| ++|||+++|++|+++|++|++++|+.++ +++..+++ +.++..+.+|++|. +++.++++.
T Consensus 5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~ 79 (269)
T 2h7i_A 5 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL-----PAKAPLLELDVQNEEHLASLAGRVT 79 (269)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS-----SSCCCEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc-----CCCceEEEccCCCHHHHHHHHHHHH
Confidence 56999999999 9999999999999999999999999765 34443322 33577889999985 355666666
Q ss_pred HHHcC-CCeEEEEEccCCCCCc---cccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCC
Q 020854 126 EAIEG-LDVGVLINNVGISYPY---ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS 201 (320)
Q Consensus 126 ~~~~~-~~id~lI~nAG~~~~~---~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~ 201 (320)
+.++. .++|+||||||...+. ..++.+.+.++|++++++|+.|++++++.++|+|.+ .|+||++||..+ . +
T Consensus 80 ~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~iss~~~-~--~ 154 (269)
T 2h7i_A 80 EAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP--GGSIVGMDFDPS-R--A 154 (269)
T ss_dssp HHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECCCS-S--C
T ss_pred HHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCeEEEEcCccc-c--c
Confidence 77761 1477999999986521 246788999999999999999999999999999965 489999999876 4 5
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHH------HHHHHHHHHhCCC-Cc
Q 020854 202 DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTD------VYARAAMRWIGYE-PC 274 (320)
Q Consensus 202 ~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~------~~a~~i~~~l~~~-~~ 274 (320)
.+.+..|++||+|+++|+++++.|++++||+||+|+||+++|+|........ ..++ +..+......+.+ +.
T Consensus 155 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~rr~ 232 (269)
T 2h7i_A 155 MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGA--LGEEAGAQIQLLEEGWDQRAPIGWNM 232 (269)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTT--TCHHHHHHHHHHHHHHHHHCTTCCCT
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhcccccc--chhhHHHHHHHHHHhhhccCCcccCC
Confidence 6788999999999999999999999999999999999999999864311000 0111 1223334445556 57
Q ss_pred ccCCchHHHHHHHHh
Q 020854 275 CTPYWPHSFIWGVLS 289 (320)
Q Consensus 275 ~~~~~~~~~~~~l~~ 289 (320)
..|++.+..+.++++
T Consensus 233 ~~p~dvA~~v~~L~s 247 (269)
T 2h7i_A 233 KDATPVAKTVCALLS 247 (269)
T ss_dssp TCCHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHhC
Confidence 788888888877765
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-35 Score=262.64 Aligned_cols=206 Identities=20% Similarity=0.229 Sum_probs=169.4
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
.+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++.++.+|++|. +.++++.+.+
T Consensus 12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~--~~v~~~~~~~ 84 (291)
T 3rd5_A 12 PSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-----AGQVEVRELDLQDL--SSVRRFADGV 84 (291)
T ss_dssp CCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS-----SSEEEEEECCTTCH--HHHHHHHHTC
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----cCCeeEEEcCCCCH--HHHHHHHHhc
Confidence 4578999999999999999999999999999999999999888776555 45789999999987 6677777766
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC--------
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP-------- 200 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~-------- 200 (320)
+ ++|+||||||+..+ ..+.+.+++++++++|+.|++++++.++|.|.+ +||++||.++....
T Consensus 85 ~--~iD~lv~nAg~~~~----~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~----riv~isS~~~~~~~~~~~~~~~ 154 (291)
T 3rd5_A 85 S--GADVLINNAGIMAV----PYALTVDGFESQIGTNHLGHFALTNLLLPRLTD----RVVTVSSMAHWPGRINLEDLNW 154 (291)
T ss_dssp C--CEEEEEECCCCCSC----CCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE----EEEEECCGGGTTCCCCSSCTTC
T ss_pred C--CCCEEEECCcCCCC----cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh----heeEeechhhccCCCCcccccc
Confidence 3 68899999998753 346778889999999999999999999999864 79999999987621
Q ss_pred ---CCCCchhhHHHHHHHHHHHHHHHHHHccCC--ceEEEEeccceecCCCccccC-----------CCCCCCHHHHHHH
Q 020854 201 ---SDPLYSVYAATKAYIDQFSRSLYVEYRKSG--IDVQCQVPLYVATKMASIKRS-----------SFFVPSTDVYARA 264 (320)
Q Consensus 201 ---~~~~~~~Y~asKaal~~~~~~l~~el~~~g--i~v~~v~PG~v~T~~~~~~~~-----------~~~~~~~~~~a~~ 264 (320)
+.++...|++||+|+++|+++++.|++++| |+|++|+||+|+|+|...... .....+||++|+.
T Consensus 155 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~ 234 (291)
T 3rd5_A 155 RSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMSAATRVVATDADFGARQ 234 (291)
T ss_dssp SSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC--------------------CHHHHHHHHH
T ss_pred cccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 134567899999999999999999999888 999999999999999764211 1112358999999
Q ss_pred HHHHhCC
Q 020854 265 AMRWIGY 271 (320)
Q Consensus 265 i~~~l~~ 271 (320)
++..+..
T Consensus 235 ~~~l~~~ 241 (291)
T 3rd5_A 235 TLYAASQ 241 (291)
T ss_dssp HHHHHHS
T ss_pred HHHHHcC
Confidence 8887654
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=263.17 Aligned_cols=211 Identities=22% Similarity=0.289 Sum_probs=176.7
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEe---------CCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--c
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG---------RNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--L 117 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~---------r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~ 117 (320)
++++||++|||||++|||+++|++|+++|++|++++ |+.+++++..+++...++ . ..+|++|. +
T Consensus 5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~--~---~~~D~~~~~~~ 79 (319)
T 1gz6_A 5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG--K---AVANYDSVEAG 79 (319)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC--E---EEEECCCGGGH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC--e---EEEeCCCHHHH
Confidence 557799999999999999999999999999999964 577788888888876432 2 24788874 3
Q ss_pred HHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccc
Q 020854 118 DEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAI 197 (320)
Q Consensus 118 ~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~ 197 (320)
++.++++.+.+++ +|+||||||+... .++.+.+.++++.++++|+.|++++++.++|+|++++.|+||++||.++.
T Consensus 80 ~~~~~~~~~~~g~--iD~lVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~ 155 (319)
T 1gz6_A 80 EKLVKTALDTFGR--IDVVVNNAGILRD--RSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGI 155 (319)
T ss_dssp HHHHHHHHHHTSC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred HHHHHHHHHHcCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhc
Confidence 4666777777775 5599999998764 56788999999999999999999999999999998888999999999998
Q ss_pred ccCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCC--CCCCCHHHHHHHHHHHhCC
Q 020854 198 VIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSS--FFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 198 ~~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~--~~~~~~~~~a~~i~~~l~~ 271 (320)
. +.++...|++||+|+.+|+++|+.|++++||+||+|+||++ |++.....+. ....+|+++|+.++..+..
T Consensus 156 ~--~~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~~~~~~~~~~p~dvA~~~~~l~s~ 228 (319)
T 1gz6_A 156 Y--GNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVMPEDLVEALKPEYVAPLVLWLCHE 228 (319)
T ss_dssp H--CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGSCHHHHHHSCGGGTHHHHHHHTST
T ss_pred c--CCCCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccCChhhhccCCHHHHHHHHHHHhCc
Confidence 7 66788999999999999999999999999999999999998 8886532111 1135889999988877643
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-35 Score=269.91 Aligned_cols=228 Identities=14% Similarity=0.063 Sum_probs=173.1
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHH-cCCeEEEEeCCHHHHH------------HHHHHHHhhcCCceEEEEEEeCC
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAK-TGLNLVLVGRNPDKLK------------DVSDSIQAKYAKTQIKSVVVDFS 114 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~-~G~~Vil~~r~~~~~~------------~~~~~l~~~~~~~~~~~~~~D~~ 114 (320)
.+...||+|||||||+|||+++|+.|++ .|++|++++|+.+..+ ...+++.+. +..+..+.+|++
T Consensus 56 ~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~--G~~a~~i~~Dvt 133 (422)
T 3s8m_A 56 VRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAA--GLYSKSINGDAF 133 (422)
T ss_dssp CCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTT
T ss_pred ccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhc--CCcEEEEEecCC
Confidence 4545699999999999999999999999 9999999999865432 223445443 456888999999
Q ss_pred CC--cHHHHHHHHHHH-cCCCeEEEEEccCCCC-----------Cccccc---------------------cCCCHHHHH
Q 020854 115 GD--LDEGVERIKEAI-EGLDVGVLINNVGISY-----------PYARFF---------------------HEVDQVLLK 159 (320)
Q Consensus 115 ~~--~~~~~~~~~~~~-~~~~id~lI~nAG~~~-----------~~~~~~---------------------~~~~~~~~~ 159 (320)
|. +++.++.+.+.+ + ++|+||||||... ...+++ .+.+.++|+
T Consensus 134 d~~~v~~~v~~i~~~~~G--~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~ 211 (422)
T 3s8m_A 134 SDAARAQVIELIKTEMGG--QVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIE 211 (422)
T ss_dssp SHHHHHHHHHHHHHHSCS--CEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHH
T ss_pred CHHHHHHHHHHHHHHcCC--CCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHH
Confidence 85 356677777777 6 4779999999731 001233 368999999
Q ss_pred HHHHHHhHHHH-HHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCc--hhhHHHHHHHHHHHHHHHHHHccCCceEEEE
Q 020854 160 NLIKVNVEGTT-KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY--SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQ 236 (320)
Q Consensus 160 ~~~~~N~~g~~-~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~--~~Y~asKaal~~~~~~l~~el~~~gi~v~~v 236 (320)
+++++|..+.+ .+++.+.+.+..+++|+||++||+++.. +.|.+ ++|++||+|+.+|+++|+.|++++|||||+|
T Consensus 212 ~~v~Vn~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~--~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaV 289 (422)
T 3s8m_A 212 DTITVMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEI--TWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVA 289 (422)
T ss_dssp HHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGG--GHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHhhchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhc--cCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEE
Confidence 99999999987 7888887654334579999999999988 56666 8999999999999999999999999999999
Q ss_pred eccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHHHh
Q 020854 237 VPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVLS 289 (320)
Q Consensus 237 ~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l~~ 289 (320)
+||+|+|+|.... +..+.....+.. ..+|..+|+.+.+.+.+|.+
T Consensus 290 aPG~i~T~~~~~i------p~~~~~~~~~~~--~m~r~G~pEdva~~v~~L~s 334 (422)
T 3s8m_A 290 VLKSVVTQASAAI------PVMPLYISMVYK--IMKEKGLHEGTIEQLDRLFR 334 (422)
T ss_dssp EECCCCCTTGGGS------THHHHHHHHHHH--HHHHTTCCCCHHHHHHHHHH
T ss_pred EcCCCcChhhhcC------CCChHHHHHHHh--hhcCCcChHHHHHHHHHHhc
Confidence 9999999998641 111222221111 23355667777776666553
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-34 Score=252.05 Aligned_cols=185 Identities=30% Similarity=0.404 Sum_probs=160.2
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
++++||+++||||++|||++++++|+++|++|++++|+.+++++..+++ ++ ...+.+|++|. +.++++.+.+
T Consensus 3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~--~~~~~~D~~~~--~~~~~~~~~~ 74 (244)
T 3d3w_A 3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC----PG--IEPVCVDLGDW--EATERALGSV 74 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TT--CEEEECCTTCH--HHHHHHHTTC
T ss_pred cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----CC--CCEEEEeCCCH--HHHHHHHHHc
Confidence 4567999999999999999999999999999999999998877665443 12 34568999986 5555555544
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccccCCCCCchh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
+ ++|+||||||.... .++.+.+.+++++++++|+.+++++++.+.|.|.+++ .|+||++||.++.. +.++...
T Consensus 75 ~--~id~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~ 148 (244)
T 3d3w_A 75 G--PVDLLVNNAAVALL--QPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR--AVTNHSV 148 (244)
T ss_dssp C--CCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS--CCTTBHH
T ss_pred C--CCCEEEECCccCCC--cchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhcc--CCCCCch
Confidence 4 46699999998653 5677889999999999999999999999999998776 79999999999987 6778899
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
|++||++++.++++++.|++++||+|++|+||++.|++..
T Consensus 149 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~ 188 (244)
T 3d3w_A 149 YCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQ 188 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHH
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchh
Confidence 9999999999999999999999999999999999999864
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-34 Score=252.34 Aligned_cols=219 Identities=20% Similarity=0.211 Sum_probs=178.8
Q ss_pred CcccccCCCEEEEECCCCcHHHHHHHHHHHcC---CeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHH
Q 020854 46 AKNLRKYGSWALVTGPTDGIGKSFAFQLAKTG---LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEG 120 (320)
Q Consensus 46 ~~~~~~~gk~vlITGas~GIG~ala~~l~~~G---~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~ 120 (320)
+....+++|+++||||++|||++++++|+++| ++|++++|+.++.+.. +++.+. +.++.++.+|++|. +++.
T Consensus 14 ~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~--~~~~~~~~~Dl~~~~~v~~~ 90 (267)
T 1sny_A 14 LVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKN--HSNIHILEIDLRNFDAYDKL 90 (267)
T ss_dssp ------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHH--CTTEEEEECCTTCGGGHHHH
T ss_pred ccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhcc--CCceEEEEecCCChHHHHHH
Confidence 34455779999999999999999999999999 9999999998766543 444443 34688999999984 3566
Q ss_pred HHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC------C-----CcEEE
Q 020854 121 VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR------K-----KGAIV 189 (320)
Q Consensus 121 ~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~------~-----~g~Iv 189 (320)
++++.+.++..++|+||||||...+ ..++.+.+.+++++++++|+.|++.+++.++|.|.++ + .++||
T Consensus 91 ~~~~~~~~g~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv 169 (267)
T 1sny_A 91 VADIEGVTKDQGLNVLFNNAGIAPK-SARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAII 169 (267)
T ss_dssp HHHHHHHHGGGCCSEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEE
T ss_pred HHHHHHhcCCCCccEEEECCCcCCC-ccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEE
Confidence 7777777773246699999998762 2567788999999999999999999999999999865 3 68999
Q ss_pred EEcCccccccC-CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHH
Q 020854 190 NIGSGAAIVIP-SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRW 268 (320)
Q Consensus 190 ~vsS~~~~~~~-~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~ 268 (320)
++||.++.... +.++...|++||++++.|+++++.|++++||+|++|+||+++|+|... ....+|+++|+.++..
T Consensus 170 ~isS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----~~~~~~~~~a~~~~~~ 245 (267)
T 1sny_A 170 NMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS----SAPLDVPTSTGQIVQT 245 (267)
T ss_dssp EECCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT----TCSBCHHHHHHHHHHH
T ss_pred EEecccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC----CCCCCHHHHHHHHHHH
Confidence 99999987621 123678899999999999999999999999999999999999999753 2357899999999999
Q ss_pred hCCC
Q 020854 269 IGYE 272 (320)
Q Consensus 269 l~~~ 272 (320)
+...
T Consensus 246 ~~~~ 249 (267)
T 1sny_A 246 ISKL 249 (267)
T ss_dssp HHHC
T ss_pred HHhc
Confidence 8654
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-34 Score=251.33 Aligned_cols=211 Identities=21% Similarity=0.296 Sum_probs=168.6
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G--~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
++|+++||||++|||++++++|+++| ++|++++|+.++++++.+ . .+.++.++.+|++|. +++.++++.+.
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~----~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (250)
T 1yo6_A 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS----I-KDSRVHVLPLTVTCDKSLDTFVSKVGEI 76 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT----C-CCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh----c-cCCceEEEEeecCCHHHHHHHHHHHHHh
Confidence 58999999999999999999999999 999999999887765432 1 245788999999984 35566666666
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC------C-----CcEEEEEcCccc
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR------K-----KGAIVNIGSGAA 196 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~------~-----~g~Iv~vsS~~~ 196 (320)
++..++|+||||||...+ ..++.+.+.+++++++++|+.|++.+++.++|.|.++ + .++||++||..+
T Consensus 77 ~g~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~ 155 (250)
T 1yo6_A 77 VGSDGLSLLINNAGVLLS-YGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG 155 (250)
T ss_dssp HGGGCCCEEEECCCCCCC-BCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGG
T ss_pred cCCCCCcEEEECCcccCC-CcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCcc
Confidence 762246699999998762 3567788999999999999999999999999999876 5 799999999998
Q ss_pred cccCCC-----CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCC
Q 020854 197 IVIPSD-----PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 197 ~~~~~~-----~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~ 271 (320)
....+. ++...|++||++++.++++++.|++++||+|++|+||+++|+|... ....+|+++|+.++..+..
T Consensus 156 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----~~~~~~~~~a~~~~~~~~~ 231 (250)
T 1yo6_A 156 SITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK----NAALTVEQSTAELISSFNK 231 (250)
T ss_dssp CSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----------------HHHHHHHHHHHTT
T ss_pred ccCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC----CCCCCHHHHHHHHHHHHhc
Confidence 772111 5678999999999999999999999999999999999999999763 2357899999999999876
Q ss_pred C
Q 020854 272 E 272 (320)
Q Consensus 272 ~ 272 (320)
+
T Consensus 232 ~ 232 (250)
T 1yo6_A 232 L 232 (250)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-34 Score=250.87 Aligned_cols=210 Identities=25% Similarity=0.381 Sum_probs=173.9
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEE-eCCHHHHHHHHHHHHhhcCCceEEE-EEEeCCCC--cHHHHHHHHHHH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAKTQIKS-VVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~-~r~~~~~~~~~~~l~~~~~~~~~~~-~~~D~~~~--~~~~~~~~~~~~ 128 (320)
+|+++||||++|||++++++|+++|++|+++ +|+.+++++..+++... +..+.. +.+|++|. +++.++++.+.+
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRR--GSPLVAVLGANLLEAEAATALVHQAAEVL 78 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHT--TCSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCceEEEEeccCCCHHHHHHHHHHHHHhc
Confidence 5899999999999999999999999999998 89999888888877664 334555 88999984 345556666667
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
++ +|+||||||.... .++.+.+.+++++++++|+.|++.+++.++|.|.+++.++||++||.++.. +.++...|
T Consensus 79 ~~--~d~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~Y 152 (245)
T 2ph3_A 79 GG--LDTLVNNAGITRD--TLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGIL--GNPGQANY 152 (245)
T ss_dssp TC--CCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH--CCSSBHHH
T ss_pred CC--CCEEEECCCCCCC--CCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhcc--CCCCCcch
Confidence 65 5599999998754 567888999999999999999999999999999887789999999999887 67888999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc-----------cCCCCCCCHHHHHHHHHHHhC
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK-----------RSSFFVPSTDVYARAAMRWIG 270 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~-----------~~~~~~~~~~~~a~~i~~~l~ 270 (320)
++||++++.++++++.|+++.||+|++|+||+++|++.... .+.....+|+++|+.++..+.
T Consensus 153 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 225 (245)
T 2ph3_A 153 VASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQEVKEAYLKQIPAGRFGRPEEVAEAVAFLVS 225 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999986421 111123456666666555543
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-35 Score=255.21 Aligned_cols=204 Identities=14% Similarity=0.066 Sum_probs=169.9
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
.+||+++||||++|||++++++|+++|++|++++|+.++.+ .....+.+|++|. +++.++++.+.+
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~v~~~~~~~~~~~ 72 (241)
T 1dhr_A 5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------------SASVIVKMTDSFTEQADQVTAEVGKLL 72 (241)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------------SEEEECCCCSCHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc------------CCcEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 45899999999999999999999999999999999976532 1356778999974 345556666666
Q ss_pred cCCCeEEEEEccCCCCCccccc-cCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 129 EGLDVGVLINNVGISYPYARFF-HEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~-~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
+..++|+||||||.... .++ .+.+.+++++++++|+.+++.+++.++|.|++ +|+||++||.++.. +.++...
T Consensus 73 ~~g~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~--~~~~~~~ 146 (241)
T 1dhr_A 73 GDQKVDAILCVAGGWAG--GNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALD--GTPGMIG 146 (241)
T ss_dssp TTCCEEEEEECCCCCCC--BCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGS--CCTTBHH
T ss_pred CCCCCCEEEEcccccCC--CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCEEEEECCHHHcc--CCCCchH
Confidence 32258899999998754 456 67889999999999999999999999999964 58999999999988 6788999
Q ss_pred hHHHHHHHHHHHHHHHHHHc--cCCceEEEEeccceecCCCccc---cCCCCCCCHHHHHHHHHHHhCCC
Q 020854 208 YAATKAYIDQFSRSLYVEYR--KSGIDVQCQVPLYVATKMASIK---RSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~--~~gi~v~~v~PG~v~T~~~~~~---~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
|++||+|+++|+++++.|++ ++||+||+|+||+++|+|.... .......+||++|+.++..+...
T Consensus 147 Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~vA~~v~~l~~~~ 216 (241)
T 1dhr_A 147 YGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEADFSSWTPLEFLVETFHDWITGN 216 (241)
T ss_dssp HHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTSCGGGSEEHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCcchhhccCCCHHHHHHHHHHHhcCC
Confidence 99999999999999999999 8999999999999999986531 11122467899999999887543
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-34 Score=260.44 Aligned_cols=193 Identities=17% Similarity=0.162 Sum_probs=152.3
Q ss_pred ccccCCCEEEEECCC--CcHHHHHHHHHHHcCCeEEEEeCCHHHH-----------HHHHHHHHhhcCCceEEEEEEeC-
Q 020854 48 NLRKYGSWALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRNPDKL-----------KDVSDSIQAKYAKTQIKSVVVDF- 113 (320)
Q Consensus 48 ~~~~~gk~vlITGas--~GIG~ala~~l~~~G~~Vil~~r~~~~~-----------~~~~~~l~~~~~~~~~~~~~~D~- 113 (320)
+++++||++|||||+ +|||+++|++|+++|++|++++|+...- ++. +++.+.........+.+|+
T Consensus 3 ~~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 81 (297)
T 1d7o_A 3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPDGSLMEIKKVYPLDAV 81 (297)
T ss_dssp CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTTSSBCCEEEEEEECTT
T ss_pred ccccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhcccccccccccccccee
Confidence 355779999999999 9999999999999999999999864211 111 1111000001134445543
Q ss_pred -------C--------------CCcHHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHH
Q 020854 114 -------S--------------GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172 (320)
Q Consensus 114 -------~--------------~~~~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l 172 (320)
+ +++++.++++.+.+++ +|+||||||+......++.+.+.++|++++++|+.|++++
T Consensus 82 ~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~--iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l 159 (297)
T 1d7o_A 82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGS--IDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSL 159 (297)
T ss_dssp CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSC--EEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred ccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCC--CCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHH
Confidence 2 2456777778777774 7799999997542235678899999999999999999999
Q ss_pred HHHHhHhhhcCCCcEEEEEcCccccccCCCCCc-hhhHHHHHHHHHHHHHHHHHHcc-CCceEEEEeccceecCCCc
Q 020854 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY-SVYAATKAYIDQFSRSLYVEYRK-SGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 173 ~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~-~~Y~asKaal~~~~~~l~~el~~-~gi~v~~v~PG~v~T~~~~ 247 (320)
+++++|+|++ +|+||++||.++.. +.++. ..|++||+|+++|+++|+.|+++ +||+||+|+||+++|+|..
T Consensus 160 ~~~~~~~m~~--~g~iv~isS~~~~~--~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~ 232 (297)
T 1d7o_A 160 LSHFLPIMNP--GGASISLTYIASER--IIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAK 232 (297)
T ss_dssp HHHHGGGEEE--EEEEEEEECGGGTS--CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSS
T ss_pred HHHHHHHhcc--CceEEEEecccccc--CCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhh
Confidence 9999999965 48999999999987 66776 68999999999999999999985 8999999999999999965
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-34 Score=252.06 Aligned_cols=205 Identities=23% Similarity=0.246 Sum_probs=166.6
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC---cHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLN-LVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD---LDEGVERIK 125 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~-Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~---~~~~~~~~~ 125 (320)
+++||+++||||++|||+++|++|+++|++ |++++|+.+. +..+++.+..++.++..+.+|++|. +++.++++.
T Consensus 2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (254)
T 1sby_A 2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIF 79 (254)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHH
Confidence 356999999999999999999999999996 9999998642 2334444444456788999999975 255667777
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC---CcEEEEEcCccccccCCC
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK---KGAIVNIGSGAAIVIPSD 202 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~---~g~Iv~vsS~~~~~~~~~ 202 (320)
+.+++ +|+||||||.. +.+++++++++|+.|++++++.++|.|.+++ .|+||++||.++.. +.
T Consensus 80 ~~~g~--id~lv~~Ag~~----------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~ 145 (254)
T 1sby_A 80 DQLKT--VDILINGAGIL----------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN--AI 145 (254)
T ss_dssp HHHSC--CCEEEECCCCC----------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS--CC
T ss_pred HhcCC--CCEEEECCccC----------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhcc--CC
Confidence 77775 55999999974 2345789999999999999999999997654 68999999999988 67
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcccc-------------CCCCCCCHHHHHHHHHHHh
Q 020854 203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKR-------------SSFFVPSTDVYARAAMRWI 269 (320)
Q Consensus 203 ~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~-------------~~~~~~~~~~~a~~i~~~l 269 (320)
++...|++||+++++|+++++.|+.+.||+|++|+||+++|++..... ......+||++|+.++..+
T Consensus 146 ~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~i~~~~ 225 (254)
T 1sby_A 146 HQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAI 225 (254)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 888999999999999999999999888999999999999999864210 0112346888888877766
Q ss_pred C
Q 020854 270 G 270 (320)
Q Consensus 270 ~ 270 (320)
.
T Consensus 226 ~ 226 (254)
T 1sby_A 226 E 226 (254)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=254.64 Aligned_cols=217 Identities=20% Similarity=0.219 Sum_probs=180.3
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
..+++||+++||||++|||++++++|+++|++|++++|+.+++++..+++.+.+ +.++..+.+|++|. +++.++++.
T Consensus 21 ~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~ 99 (302)
T 1w6u_A 21 PNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVRDPDMVQNTVSELI 99 (302)
T ss_dssp TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCceEEEEeCCCCHHHHHHHHHHHH
Confidence 345779999999999999999999999999999999999999888888887653 34688999999985 345556666
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhh-cCCCcEEEEEcCccccccCCCCC
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGML-KRKKGAIVNIGSGAAIVIPSDPL 204 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~-~~~~g~Iv~vsS~~~~~~~~~~~ 204 (320)
+.+++ +|+||||||.... .++.+.+.+++++++++|+.|++++++.++|.|. +++.++||++||..+.. +.++
T Consensus 100 ~~~g~--id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~ 173 (302)
T 1w6u_A 100 KVAGH--PNIVINNAAGNFI--SPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAET--GSGF 173 (302)
T ss_dssp HHTCS--CSEEEECCCCCCC--SCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHH--CCTT
T ss_pred HHcCC--CCEEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEccccccc--CCCC
Confidence 66664 5599999998653 5677889999999999999999999999999997 45578999999999987 6788
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecC-CCccc-------------cCCCCCCCHHHHHHHHHHHhC
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATK-MASIK-------------RSSFFVPSTDVYARAAMRWIG 270 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~-~~~~~-------------~~~~~~~~~~~~a~~i~~~l~ 270 (320)
...|++||++++.++++++.|++++||+|++|+||+++|+ +.... .+.....+|+++|+.++..+.
T Consensus 174 ~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~~ 253 (302)
T 1w6u_A 174 VVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCS 253 (302)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTS
T ss_pred cchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCcCCCCCHHHHHHHHHHHcC
Confidence 8999999999999999999999999999999999999998 43311 111224589999999888775
Q ss_pred C
Q 020854 271 Y 271 (320)
Q Consensus 271 ~ 271 (320)
.
T Consensus 254 ~ 254 (302)
T 1w6u_A 254 D 254 (302)
T ss_dssp G
T ss_pred C
Confidence 3
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-34 Score=262.27 Aligned_cols=194 Identities=19% Similarity=0.164 Sum_probs=151.7
Q ss_pred ccccCCCEEEEECC--CCcHHHHHHHHHHHcCCeEEEEeCCHH------HHH-HHHHHHHhhcCCc---eEEEEEEeC--
Q 020854 48 NLRKYGSWALVTGP--TDGIGKSFAFQLAKTGLNLVLVGRNPD------KLK-DVSDSIQAKYAKT---QIKSVVVDF-- 113 (320)
Q Consensus 48 ~~~~~gk~vlITGa--s~GIG~ala~~l~~~G~~Vil~~r~~~------~~~-~~~~~l~~~~~~~---~~~~~~~D~-- 113 (320)
.++++||++||||| |+|||+++|++|+++|++|++++|+.. ..+ +..+++.+...+. ....+.+|+
T Consensus 4 ~~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 83 (315)
T 2o2s_A 4 PIDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAF 83 (315)
T ss_dssp CCCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTC
T ss_pred cccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccc
Confidence 45577999999999 899999999999999999999998742 011 0111121111011 023333332
Q ss_pred ----------CC----------CcHHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHH
Q 020854 114 ----------SG----------DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173 (320)
Q Consensus 114 ----------~~----------~~~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~ 173 (320)
+| +++..++++.+.+++ +|+||||||+......++.+.+.++|++++++|+.|+++++
T Consensus 84 ~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~--iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~ 161 (315)
T 2o2s_A 84 DKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGN--IDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLL 161 (315)
T ss_dssp SSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCS--EEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred cccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCC--CCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHH
Confidence 22 456777788888874 77999999976422356788999999999999999999999
Q ss_pred HHHhHhhhcCCCcEEEEEcCccccccCCCCCc-hhhHHHHHHHHHHHHHHHHHHcc-CCceEEEEeccceecCCCc
Q 020854 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY-SVYAATKAYIDQFSRSLYVEYRK-SGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 174 ~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~-~~Y~asKaal~~~~~~l~~el~~-~gi~v~~v~PG~v~T~~~~ 247 (320)
+.++|+|.+ +|+||++||.++.. +.++. ..|++||+|+.+|+++|+.|+++ +||+||+|+||+|+|+|..
T Consensus 162 ~~~~~~m~~--~g~Iv~isS~~~~~--~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~ 233 (315)
T 2o2s_A 162 QHFGPIMNE--GGSAVTLSYLAAER--VVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAAS 233 (315)
T ss_dssp HHHSTTEEE--EEEEEEEEEGGGTS--CCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHH
T ss_pred HHHHHHHhc--CCEEEEEecccccc--cCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhh
Confidence 999999965 48999999999987 66776 58999999999999999999985 8999999999999999854
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=253.06 Aligned_cols=201 Identities=14% Similarity=0.093 Sum_probs=168.3
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHc
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIE 129 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~ 129 (320)
+||+++||||++|||++++++|+++|++|++++|+.++.+ .....+.+|++|. +++.++++.+.++
T Consensus 2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 69 (236)
T 1ooe_A 2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------------DSNILVDGNKNWTEQEQSILEQTASSLQ 69 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------------SEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc------------cccEEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 5899999999999999999999999999999999976532 1356778899874 2455566666663
Q ss_pred CCCeEEEEEccCCCCCccccc-cCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 130 GLDVGVLINNVGISYPYARFF-HEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~-~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
..++|+||||||.... .++ .+.+.+++++++++|+.|++++++.++|.|.+ .|+||++||.++.. +.++...|
T Consensus 70 ~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~--~~~~~~~Y 143 (236)
T 1ooe_A 70 GSQVDGVFCVAGGWAG--GSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMG--PTPSMIGY 143 (236)
T ss_dssp TCCEEEEEECCCCCCC--BCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGS--CCTTBHHH
T ss_pred CCCCCEEEECCcccCC--CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEECchhhcc--CCCCcHHH
Confidence 2358899999998754 455 67888999999999999999999999999964 58999999999988 67889999
Q ss_pred HHHHHHHHHHHHHHHHHHc--cCCceEEEEeccceecCCCccc---cCCCCCCCHHHHHHHHHHHhC
Q 020854 209 AATKAYIDQFSRSLYVEYR--KSGIDVQCQVPLYVATKMASIK---RSSFFVPSTDVYARAAMRWIG 270 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~--~~gi~v~~v~PG~v~T~~~~~~---~~~~~~~~~~~~a~~i~~~l~ 270 (320)
++||+++++|+++++.|++ ++||+|++|+||+++|+|.... .......+|+++|+.++..+.
T Consensus 144 ~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~dvA~~i~~~l~ 210 (236)
T 1ooe_A 144 GMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPNADHSSWTPLSFISEHLLKWTT 210 (236)
T ss_dssp HHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTTCCGGGCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCCCccccccCCHHHHHHHHHHHHc
Confidence 9999999999999999998 9999999999999999986531 111234689999999987773
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-34 Score=263.08 Aligned_cols=227 Identities=15% Similarity=0.080 Sum_probs=173.8
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHH-cCCeEEEEeCCHHHHH------------HHHHHHHhhcCCceEEEEEEeCCC
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAK-TGLNLVLVGRNPDKLK------------DVSDSIQAKYAKTQIKSVVVDFSG 115 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~-~G~~Vil~~r~~~~~~------------~~~~~l~~~~~~~~~~~~~~D~~~ 115 (320)
....||++||||||+|||+++|+.|++ .|++|++++|+.+..+ ...+++.+. +..+..+.+|++|
T Consensus 43 ~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~--G~~a~~i~~Dvtd 120 (405)
T 3zu3_A 43 IANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQK--GLYAKSINGDAFS 120 (405)
T ss_dssp CTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTTS
T ss_pred cCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhc--CCceEEEECCCCC
Confidence 345689999999999999999999999 9999999998765422 223344443 4568889999998
Q ss_pred C--cHHHHHHHHHHHcCCCeEEEEEccCCCCC-----------ccccc---------------------cCCCHHHHHHH
Q 020854 116 D--LDEGVERIKEAIEGLDVGVLINNVGISYP-----------YARFF---------------------HEVDQVLLKNL 161 (320)
Q Consensus 116 ~--~~~~~~~~~~~~~~~~id~lI~nAG~~~~-----------~~~~~---------------------~~~~~~~~~~~ 161 (320)
. +++.++++.+.+++ +|+||||||.... ..+++ ++.+.++|+++
T Consensus 121 ~~~v~~~v~~i~~~~G~--IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~ 198 (405)
T 3zu3_A 121 DEIKQLTIDAIKQDLGQ--VDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDST 198 (405)
T ss_dssp HHHHHHHHHHHHHHTSC--EEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC--CCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHH
Confidence 5 35677777777875 7799999997510 12344 77899999999
Q ss_pred HHHHhHHHH-HHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCc--hhhHHHHHHHHHHHHHHHHHHccC-CceEEEEe
Q 020854 162 IKVNVEGTT-KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY--SVYAATKAYIDQFSRSLYVEYRKS-GIDVQCQV 237 (320)
Q Consensus 162 ~~~N~~g~~-~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~--~~Y~asKaal~~~~~~l~~el~~~-gi~v~~v~ 237 (320)
+++|..+.+ .+++.+.+.+..+++|+||++||+.+.. +.|.+ +.|++||+|+.+++++|+.||+++ |||||+|+
T Consensus 199 v~Vn~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~--~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVa 276 (405)
T 3zu3_A 199 VAVMGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKI--THDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSV 276 (405)
T ss_dssp HHHHSSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGG--GTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEE
T ss_pred HHhhchhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhC--cCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEE
Confidence 999999998 7888877543333469999999999988 66777 999999999999999999999999 99999999
Q ss_pred ccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHHHh
Q 020854 238 PLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVLS 289 (320)
Q Consensus 238 PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l~~ 289 (320)
||+++|++.... +..+.....+.+- .++..+|+.+.+.+.+|.+
T Consensus 277 PG~i~T~~s~~i------p~~p~y~~~l~~~--mkr~G~~Ed~a~~i~~L~s 320 (405)
T 3zu3_A 277 LKAVVSQASSAI------PMMPLYLSLLFKV--MKEKGTHEGCIEQVYSLYK 320 (405)
T ss_dssp CCCCCCHHHHTS------TTHHHHHHHHHHH--HHHHTCCCCHHHHHHHHHH
T ss_pred eCCCcCchhhcC------CCCcHHHHHHHHH--HhcCCCcHHHHHHHHHHHh
Confidence 999999987641 1122222222221 3356667777777766654
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=256.71 Aligned_cols=183 Identities=25% Similarity=0.361 Sum_probs=157.7
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
++||+++|||||+|||++++++|+++|++|++++|+.+++++..+++.+...+.++..+.+|++|. +++.++.+.+.+
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF 84 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence 468999999999999999999999999999999999988888777776543345688999999984 355666677777
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC---CcEEEEEcCccccccCCCCCc
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK---KGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~---~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
++ +|+||||||... .++|++++++|+.|++.+++.++|.|.+++ .|+||++||.++.. +.++.
T Consensus 85 g~--id~lv~~Ag~~~----------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~ 150 (267)
T 2gdz_A 85 GR--LDILVNNAGVNN----------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM--PVAQQ 150 (267)
T ss_dssp SC--CCEEEECCCCCC----------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS--CCTTC
T ss_pred CC--CCEEEECCCCCC----------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccC--CCCCC
Confidence 75 559999999752 234788999999999999999999997653 68999999999987 67888
Q ss_pred hhhHHHHHHHHHHHHHH--HHHHccCCceEEEEeccceecCCCc
Q 020854 206 SVYAATKAYIDQFSRSL--YVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l--~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
..|++||++++++++++ +.|+++.||+||+|+||+++|++..
T Consensus 151 ~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~ 194 (267)
T 2gdz_A 151 PVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILE 194 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhh
Confidence 99999999999999995 6899999999999999999999854
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-33 Score=252.17 Aligned_cols=214 Identities=22% Similarity=0.325 Sum_probs=179.9
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhc---CCceEEEEEEeCCCC--cHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKY---AKTQIKSVVVDFSGD--LDEGVERI 124 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~---~~~~~~~~~~D~~~~--~~~~~~~~ 124 (320)
.++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. .+.++..+.+|++|. +++.++++
T Consensus 15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 94 (303)
T 1yxm_A 15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST 94 (303)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHH
Confidence 5779999999999999999999999999999999999999988888886521 145789999999985 35556666
Q ss_pred HHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCC
Q 020854 125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL 204 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~ 204 (320)
.+.+++ +|+||||||.... .++.+.+.+++++++++|+.|+++++++++|.+.+++.|+||++||.+ .. +.+.
T Consensus 95 ~~~~g~--id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~--~~~~ 167 (303)
T 1yxm_A 95 LDTFGK--INFLVNNGGGQFL--SPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KA--GFPL 167 (303)
T ss_dssp HHHHSC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TT--CCTT
T ss_pred HHHcCC--CCEEEECCCCCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-cc--CCCc
Confidence 667775 5599999997653 567788999999999999999999999999976655679999999988 55 6788
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCC--ccc-------------cCCCCCCCHHHHHHHHHHHh
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMA--SIK-------------RSSFFVPSTDVYARAAMRWI 269 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~--~~~-------------~~~~~~~~~~~~a~~i~~~l 269 (320)
...|++||+++.+++++++.|++++||+|++|+||++.|++. ... .+.....+|+++|+.++..+
T Consensus 168 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~ 247 (303)
T 1yxm_A 168 AVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLL 247 (303)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHHHHHHHHHHHh
Confidence 899999999999999999999999999999999999999942 210 11223568999999998877
Q ss_pred C
Q 020854 270 G 270 (320)
Q Consensus 270 ~ 270 (320)
.
T Consensus 248 ~ 248 (303)
T 1yxm_A 248 S 248 (303)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=248.34 Aligned_cols=225 Identities=22% Similarity=0.258 Sum_probs=182.2
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCC-HHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-PDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
++||+++||||++|||++++++|+++|++|++++|+ .+++++..+++... +.++..+.+|++|. +++.++++.+.
T Consensus 5 l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (258)
T 3afn_B 5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRAD--GGDAAFFAADLATSEACQQLVDEFVAK 82 (258)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 569999999999999999999999999999999999 88888888877654 45788999999985 35566666667
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC--C---cEEEEEcCccccccCCC
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK--K---GAIVNIGSGAAIVIPSD 202 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~--~---g~Iv~vsS~~~~~~~~~ 202 (320)
+++ +|+||||||.... ..++.+.+.+++++++++|+.|++.+++.++|.|.+++ . ++||++||..+... +.
T Consensus 83 ~g~--id~vi~~Ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-~~ 158 (258)
T 3afn_B 83 FGG--IDVLINNAGGLVG-RKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG-GG 158 (258)
T ss_dssp HSS--CSEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC-CC
T ss_pred cCC--CCEEEECCCCcCC-cCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC-CC
Confidence 765 5599999997322 35677889999999999999999999999999997654 3 89999999988652 34
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHH
Q 020854 203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHS 282 (320)
Q Consensus 203 ~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~ 282 (320)
++...|++||++++.++++++.|++++||+|++|+||+++|++.... . ++..+.+....+.++...+.+...
T Consensus 159 ~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~dva~ 230 (258)
T 3afn_B 159 PGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK-------T-QDVRDRISNGIPMGRFGTAEEMAP 230 (258)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC-------C-HHHHHHHHTTCTTCSCBCGGGTHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc-------C-HHHHHHHhccCCCCcCCCHHHHHH
Confidence 67889999999999999999999999999999999999999986531 2 233333333334446677778777
Q ss_pred HHHHHHh
Q 020854 283 FIWGVLS 289 (320)
Q Consensus 283 ~~~~l~~ 289 (320)
.+.++++
T Consensus 231 ~~~~l~~ 237 (258)
T 3afn_B 231 AFLFFAS 237 (258)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 7766653
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=268.25 Aligned_cols=188 Identities=24% Similarity=0.363 Sum_probs=157.0
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
+.||++|||||++|||+++|++|+++|++|++++|+... ++..+...+. .+..+.+|++|. +++.++++.+.+
T Consensus 211 l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~~~~~~----~~~~~~~Dvtd~~~v~~~~~~~~~~~ 285 (454)
T 3u0b_A 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADKV----GGTALTLDVTADDAVDKITAHVTEHH 285 (454)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHHHHH----TCEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHHc----CCeEEEEecCCHHHHHHHHHHHHHHc
Confidence 579999999999999999999999999999999997532 2222222221 245789999986 245556666666
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
++ ++|+||||||+... .++.+.+.++|++++++|+.|++++++.+.|.|.+++.++||++||.++.. +.++.+.|
T Consensus 286 g~-~id~lV~nAGv~~~--~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~--g~~g~~~Y 360 (454)
T 3u0b_A 286 GG-KVDILVNNAGITRD--KLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIA--GNRGQTNY 360 (454)
T ss_dssp TT-CCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHH--CCTTCHHH
T ss_pred CC-CceEEEECCcccCC--CccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCC--CCCCCHHH
Confidence 54 36699999999865 678899999999999999999999999999999888899999999999998 78899999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI 248 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~ 248 (320)
++||+++++|+++++.|++++||+||+|+||+++|+|...
T Consensus 361 aasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~ 400 (454)
T 3u0b_A 361 ATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEA 400 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC-----
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhh
Confidence 9999999999999999999999999999999999999763
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-34 Score=251.17 Aligned_cols=204 Identities=16% Similarity=0.110 Sum_probs=166.0
Q ss_pred cccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHH
Q 020854 47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERI 124 (320)
Q Consensus 47 ~~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~ 124 (320)
...+..||++|||||++|||+++|++|+++|++|++++|+.++.+ -..+.+|++|. +++.++++
T Consensus 16 ~~~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~--------------~~~~~~d~~d~~~v~~~~~~~ 81 (251)
T 3orf_A 16 PRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA--------------DHSFTIKDSGEEEIKSVIEKI 81 (251)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS--------------SEEEECSCSSHHHHHHHHHHH
T ss_pred ccccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------------ccceEEEeCCHHHHHHHHHHH
Confidence 344567899999999999999999999999999999999986532 13467888875 23333444
Q ss_pred HHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCC
Q 020854 125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL 204 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~ 204 (320)
.+.++ ++|+||||||.... ..++.+.+.+++++++++|+.|++++++.++|.|++ .|+||++||.++.. +.++
T Consensus 82 ~~~~g--~iD~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~--~~~~ 154 (251)
T 3orf_A 82 NSKSI--KVDTFVCAAGGWSG-GNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ--GGLFVLTGASAALN--RTSG 154 (251)
T ss_dssp HTTTC--CEEEEEECCCCCCC-BCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGS--CCTT
T ss_pred HHHcC--CCCEEEECCccCCC-CCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc--CCEEEEEechhhcc--CCCC
Confidence 44344 58899999998764 233677889999999999999999999999999865 58999999999988 7788
Q ss_pred chhhHHHHHHHHHHHHHHHHHHc--cCCceEEEEeccceecCCCcc---ccCCCCCCCHHHHHHHHHHHhCC
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYR--KSGIDVQCQVPLYVATKMASI---KRSSFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~--~~gi~v~~v~PG~v~T~~~~~---~~~~~~~~~~~~~a~~i~~~l~~ 271 (320)
...|++||+|++.|+++++.|++ ++||+|++|+||+++|++... ..+.....+|+++|+.++..+..
T Consensus 155 ~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~dva~~i~~l~~~ 226 (251)
T 3orf_A 155 MIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMSDANFDDWTPLSEVAEKLFEWSTN 226 (251)
T ss_dssp BHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHCTTSCGGGSBCHHHHHHHHHHHHHC
T ss_pred CchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhcccccccccCCHHHHHHHHHHHhcC
Confidence 99999999999999999999987 899999999999999999753 22233467899999999998876
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=264.24 Aligned_cols=193 Identities=18% Similarity=0.216 Sum_probs=130.6
Q ss_pred cccCCCEEEEECC--CCcHHHHHHHHHHHcCCeEEEEeCCH-----------HHHH-----------HHHHHHHhhcCC-
Q 020854 49 LRKYGSWALVTGP--TDGIGKSFAFQLAKTGLNLVLVGRNP-----------DKLK-----------DVSDSIQAKYAK- 103 (320)
Q Consensus 49 ~~~~gk~vlITGa--s~GIG~ala~~l~~~G~~Vil~~r~~-----------~~~~-----------~~~~~l~~~~~~- 103 (320)
++++||++||||| ++|||+++|++|+++|++|++++|+. ++++ +..+++.+.+..
T Consensus 5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (319)
T 2ptg_A 5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDL 84 (319)
T ss_dssp CCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccc
Confidence 4567999999999 89999999999999999999998753 2222 223333322110
Q ss_pred ceEEEEEEe------------CCC----------CcHHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHH
Q 020854 104 TQIKSVVVD------------FSG----------DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNL 161 (320)
Q Consensus 104 ~~~~~~~~D------------~~~----------~~~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~ 161 (320)
.....+.+| ++| +++..++++.+.+++ +|+||||||+......++.+.+.++|+++
T Consensus 85 ~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~--iD~lVnnAg~~~~~~~~~~~~~~~~~~~~ 162 (319)
T 2ptg_A 85 VFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQ--IDILVHSLANGPEVTKPLLQTSRKGYLAA 162 (319)
T ss_dssp CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSC--EEEEEEEEECCSSSSSCGGGCCHHHHHHH
T ss_pred cccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCC--CCEEEECCccCCCCCCccccCCHHHHHHH
Confidence 002333333 222 456777888888874 77999999976322356788999999999
Q ss_pred HHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCc-hhhHHHHHHHHHHHHHHHHHHcc-CCceEEEEecc
Q 020854 162 IKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY-SVYAATKAYIDQFSRSLYVEYRK-SGIDVQCQVPL 239 (320)
Q Consensus 162 ~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~-~~Y~asKaal~~~~~~l~~el~~-~gi~v~~v~PG 239 (320)
+++|+.|++++++.++|+|.+ .|+||++||.++.. +.++. ..|++||+|+.+|+++|+.|+++ +||+||+|+||
T Consensus 163 ~~vN~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~--~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG 238 (319)
T 2ptg_A 163 VSSSSYSFVSLLQHFLPLMKE--GGSALALSYIASEK--VIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAG 238 (319)
T ss_dssp HHHHTHHHHHHHHHHGGGEEE--EEEEEEEEECC--------------------THHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred HhHhhHHHHHHHHHHHHHHhc--CceEEEEecccccc--ccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeC
Confidence 999999999999999999965 49999999999987 66776 68999999999999999999985 89999999999
Q ss_pred ceecCCCc
Q 020854 240 YVATKMAS 247 (320)
Q Consensus 240 ~v~T~~~~ 247 (320)
+|+|+|..
T Consensus 239 ~v~T~~~~ 246 (319)
T 2ptg_A 239 PLKSRAAS 246 (319)
T ss_dssp CCC-----
T ss_pred CccChhhh
Confidence 99999865
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-33 Score=246.23 Aligned_cols=184 Identities=29% Similarity=0.379 Sum_probs=159.3
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
+++||+++||||+||||++++++|+++|++|++++|+.+++++..+++ ++ +..+.+|++|. +.++++.+.++
T Consensus 4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~--~~~~~~D~~~~--~~~~~~~~~~~ 75 (244)
T 1cyd_A 4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----PG--IEPVCVDLGDW--DATEKALGGIG 75 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TT--CEEEECCTTCH--HHHHHHHTTCC
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----cC--CCcEEecCCCH--HHHHHHHHHcC
Confidence 467999999999999999999999999999999999998776655432 12 45568999986 55566555444
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccccCCCCCchhh
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
++|+||||||.... .++.+.+.+++++++++|+.|++++++.+.|.|.+++ .++||++||..+.. +.++...|
T Consensus 76 --~id~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~Y 149 (244)
T 1cyd_A 76 --PVDLLVNNAALVIM--QPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV--TFPNLITY 149 (244)
T ss_dssp --CCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS--CCTTBHHH
T ss_pred --CCCEEEECCcccCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcC--CCCCcchh
Confidence 46699999998754 5677889999999999999999999999999998776 79999999999987 67888999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
++||++++.++++++.|++++||+|++|+||++.|++..
T Consensus 150 ~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~ 188 (244)
T 1cyd_A 150 SSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGK 188 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcccc
Confidence 999999999999999999999999999999999999754
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-33 Score=246.90 Aligned_cols=190 Identities=25% Similarity=0.317 Sum_probs=165.5
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeC-CHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERI 124 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~ 124 (320)
.++++||+++||||++|||++++++|+++|++|++++| +.+++++..+++.+. +.++..+.+|++|. +++.++++
T Consensus 16 ~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~ 93 (274)
T 1ja9_A 16 SKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL--GAQGVAIQADISKPSEVVALFDKA 93 (274)
T ss_dssp CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHH
Confidence 45577999999999999999999999999999999999 888888887777664 45688899999985 34555666
Q ss_pred HHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccc-ccCCCC
Q 020854 125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAI-VIPSDP 203 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~-~~~~~~ 203 (320)
.+.++ ++|+||||||.... .++.+.+.+++++++++|+.|++++++.++|.|+ + +++||++||.++. . +.+
T Consensus 94 ~~~~~--~~d~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~-~~~iv~~sS~~~~~~--~~~ 165 (274)
T 1ja9_A 94 VSHFG--GLDFVMSNSGMEVW--CDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCR-R-GGRIILTSSIAAVMT--GIP 165 (274)
T ss_dssp HHHHS--CEEEEECCCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEE-E-EEEEEEECCGGGTCC--SCC
T ss_pred HHHcC--CCCEEEECCCCCCC--cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-h-CCEEEEEcChHhccC--CCC
Confidence 66666 47799999998754 5677889999999999999999999999999987 3 3899999999997 5 567
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 204 ~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
+...|++||++++.++++++.|++++||++++|+||+++|++..
T Consensus 166 ~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~ 209 (274)
T 1ja9_A 166 NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFD 209 (274)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchh
Confidence 88999999999999999999999999999999999999999865
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-34 Score=278.92 Aligned_cols=214 Identities=23% Similarity=0.262 Sum_probs=163.6
Q ss_pred CCcccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeC---------CHHHHHHHHHHHHhhcCCceEEEEEEeCCC
Q 020854 45 PAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR---------NPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115 (320)
Q Consensus 45 ~~~~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~ 115 (320)
+...++++||++|||||++|||+++|++|+++|++|++++| +.+++++..+++.+.+. .+ .+|++|
T Consensus 11 ~~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~--~~---~~D~~d 85 (613)
T 3oml_A 11 SDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGG--EA---VADYNS 85 (613)
T ss_dssp ----CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTC--CE---EECCCC
T ss_pred cccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCC--eE---EEEeCC
Confidence 34456688999999999999999999999999999999988 77778888888876542 22 368876
Q ss_pred C--cHHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcC
Q 020854 116 D--LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGS 193 (320)
Q Consensus 116 ~--~~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS 193 (320)
. +++.++++.+.+++ +|+||||||+... .++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||
T Consensus 86 ~~~~~~~~~~~~~~~g~--iDiLVnnAGi~~~--~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS 161 (613)
T 3oml_A 86 VIDGAKVIETAIKAFGR--VDILVNNAGILRD--RSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSS 161 (613)
T ss_dssp GGGHHHHHC------------CEECCCCCCCC--CCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHHCCC--CcEEEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 4 34566666666665 6699999999765 6788999999999999999999999999999999988999999999
Q ss_pred ccccccCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccC--CCCCCCHHHHHHHHHHHhC
Q 020854 194 GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRS--SFFVPSTDVYARAAMRWIG 270 (320)
Q Consensus 194 ~~~~~~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~--~~~~~~~~~~a~~i~~~l~ 270 (320)
.++.. +.++.+.|++||+|+.+|+++|+.|++++||+||+|+||.+ |+|.....+ .....+|+++|+.++..+.
T Consensus 162 ~a~~~--~~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~~~~~~~~~pedvA~~v~~L~s 237 (613)
T 3oml_A 162 NSGIY--GNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILPDILFNELKPKLIAPVVAYLCH 237 (613)
T ss_dssp HHHHH--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCCHHHHTTCCGGGTHHHHHHTTS
T ss_pred HHHcC--CCCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-ChhhhhccchhhhhcCCHHHHHHHHHHhcC
Confidence 99998 77889999999999999999999999999999999999975 666553211 1224589999999887653
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-32 Score=240.32 Aligned_cols=207 Identities=23% Similarity=0.238 Sum_probs=172.1
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHH-cCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAK-TGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~-~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
++|+++||||++|||++++++|++ +|++|++++|+.++.++..+++.+. +.++.++.+|++|. +++.++++.+.+
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQLDIDDLQSIRALRDFLRKEY 80 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc--CCeeEEEECCCCCHHHHHHHHHHHHHhc
Confidence 589999999999999999999999 9999999999999988888888764 34678899999984 345556666666
Q ss_pred cCCCeEEEEEccCCCCCccccccCCC-HHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccccc--------
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVD-QVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI-------- 199 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~-~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~-------- 199 (320)
+ ++|+||||||.... .. .+.+ .+++++++++|+.|++++++.++|.|.+ .|+||++||.++..+
T Consensus 81 g--~id~li~~Ag~~~~--~~-~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~~~ 153 (276)
T 1wma_A 81 G--GLDVLVNNAGIAFK--VA-DPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPEL 153 (276)
T ss_dssp S--SEEEEEECCCCCCC--TT-CCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHH
T ss_pred C--CCCEEEECCccccc--CC-CccccHHHHHhhhheeeeeHHHHHHHHHHhhCC--CCEEEEECChhhhcccccCChhH
Confidence 5 47799999998653 22 2334 5889999999999999999999999864 489999999887631
Q ss_pred --------------------------------CCCCCchhhHHHHHHHHHHHHHHHHHHcc----CCceEEEEeccceec
Q 020854 200 --------------------------------PSDPLYSVYAATKAYIDQFSRSLYVEYRK----SGIDVQCQVPLYVAT 243 (320)
Q Consensus 200 --------------------------------~~~~~~~~Y~asKaal~~~~~~l~~el~~----~gi~v~~v~PG~v~T 243 (320)
++.|. ..|++||++++.|+++++.|+++ .||+|++|+||+|+|
T Consensus 154 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t 232 (276)
T 1wma_A 154 QQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPS-SAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRT 232 (276)
T ss_dssp HHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCS-CHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCS
T ss_pred HhhccccccchhhhhhhhhhhhhhhcccccccCCCcc-chhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCcccc
Confidence 01122 78999999999999999999987 799999999999999
Q ss_pred CCCccccCCCCCCCHHHHHHHHHHHhCCC
Q 020854 244 KMASIKRSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
+|... ....+|+++|+.++..+..+
T Consensus 233 ~~~~~----~~~~~~~~~a~~~~~l~~~~ 257 (276)
T 1wma_A 233 DMAGP----KATKSPEEGAETPVYLALLP 257 (276)
T ss_dssp TTTCT----TCSBCHHHHTHHHHHHHSCC
T ss_pred CcCCc----cccCChhHhhhhHhhhhcCc
Confidence 99763 23579999999999988644
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=6.7e-32 Score=252.06 Aligned_cols=192 Identities=11% Similarity=0.085 Sum_probs=155.6
Q ss_pred cCCCEEEEECCCCcHHHH--HHHHHHHcCCeEEEEeCCHHH------------HHHHHHHHHhhcCCceEEEEEEeCCCC
Q 020854 51 KYGSWALVTGPTDGIGKS--FAFQLAKTGLNLVLVGRNPDK------------LKDVSDSIQAKYAKTQIKSVVVDFSGD 116 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~a--la~~l~~~G~~Vil~~r~~~~------------~~~~~~~l~~~~~~~~~~~~~~D~~~~ 116 (320)
..||+|||||||+|||++ +++.|+++|++|++++|+.+. .+...+.+.+. +..+..+.+|++|.
T Consensus 58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~Dvtd~ 135 (418)
T 4eue_A 58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKK--GLVAKNFIEDAFSN 135 (418)
T ss_dssp CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTTCH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHc--CCcEEEEEeeCCCH
Confidence 569999999999999999 999999999999999997543 23333333333 45688999999985
Q ss_pred --cHHHHHHHHHHHcCCCeEEEEEccCCCCC-----------ccccc---------------------cCCCHHHHHHHH
Q 020854 117 --LDEGVERIKEAIEGLDVGVLINNVGISYP-----------YARFF---------------------HEVDQVLLKNLI 162 (320)
Q Consensus 117 --~~~~~~~~~~~~~~~~id~lI~nAG~~~~-----------~~~~~---------------------~~~~~~~~~~~~ 162 (320)
+++.++++.+.++ ++|+||||||.... ..+++ ++.+.++|+.++
T Consensus 136 ~~v~~~v~~i~~~~G--~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~ 213 (418)
T 4eue_A 136 ETKDKVIKYIKDEFG--KIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETR 213 (418)
T ss_dssp HHHHHHHHHHHHTTC--CEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC--CCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHH
Confidence 3455666666665 57799999997410 01223 467999999999
Q ss_pred HHHhHHHH-HHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCc--hhhHHHHHHHHHHHHHHHHHHcc-CCceEEEEec
Q 020854 163 KVNVEGTT-KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY--SVYAATKAYIDQFSRSLYVEYRK-SGIDVQCQVP 238 (320)
Q Consensus 163 ~~N~~g~~-~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~--~~Y~asKaal~~~~~~l~~el~~-~gi~v~~v~P 238 (320)
++|..+.+ .+++.+.+.+..+++|+||++||+++.. +.|.+ +.|++||+|+.+|+++|+.|+++ +||+||+|+|
T Consensus 214 ~vn~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~--~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~P 291 (418)
T 4eue_A 214 KVMGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPR--TYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVN 291 (418)
T ss_dssp HHHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGG--GTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred HHhhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcC--CCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEEC
Confidence 99999988 7788877755545679999999999988 66777 99999999999999999999999 9999999999
Q ss_pred cceecCCCcc
Q 020854 239 LYVATKMASI 248 (320)
Q Consensus 239 G~v~T~~~~~ 248 (320)
|+|+|++...
T Consensus 292 G~v~T~~s~~ 301 (418)
T 4eue_A 292 KALVTKASAY 301 (418)
T ss_dssp CCCCCHHHHT
T ss_pred CcCcChhhhc
Confidence 9999998764
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.98 E-value=1.2e-31 Score=233.90 Aligned_cols=198 Identities=21% Similarity=0.213 Sum_probs=158.5
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHc
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIE 129 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~ 129 (320)
++|+++||||++|||++++++|+++|++|++++|+.+ . ..+..+.+|++|. +++.++++ +.++
T Consensus 1 ~~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-------------~~~~~~~~D~~~~~~~~~~~~~~-~~~~ 65 (242)
T 1uay_A 1 MERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-------------EDLIYVEGDVTREEDVRRAVARA-QEEA 65 (242)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-------------SSSEEEECCTTCHHHHHHHHHHH-HHHS
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-------------cceEEEeCCCCCHHHHHHHHHHH-HhhC
Confidence 3789999999999999999999999999999999865 1 1247889999985 23444444 4444
Q ss_pred CCCeEEEEEccCCCCCccccccCC----CHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC---C---cEEEEEcCcccccc
Q 020854 130 GLDVGVLINNVGISYPYARFFHEV----DQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK---K---GAIVNIGSGAAIVI 199 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~----~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~---~---g~Iv~vsS~~~~~~ 199 (320)
++|++|||||.... .++.+. +.+++++++++|+.+++++++.+.|.|.+++ . ++||++||..+..
T Consensus 66 --~~d~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~- 140 (242)
T 1uay_A 66 --PLFAVVSAAGVGLA--EKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE- 140 (242)
T ss_dssp --CEEEEEECCCCCCC--CCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH-
T ss_pred --CceEEEEcccccCc--ccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc-
Confidence 57899999998654 334443 3458999999999999999999999998764 3 4999999999987
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc-----------cCC-CCCCCHHHHHHHHHH
Q 020854 200 PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK-----------RSS-FFVPSTDVYARAAMR 267 (320)
Q Consensus 200 ~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~-----------~~~-~~~~~~~~~a~~i~~ 267 (320)
+.++...|++||++++.++++++.|++++||+|++|+||+++|++.... .+. ....+|+++|+.++.
T Consensus 141 -~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 219 (242)
T 1uay_A 141 -GQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLH 219 (242)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCCCHHHHHHHHHH
T ss_pred -CCCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchhHHHHHHhhCCCcccCCCHHHHHHHHHH
Confidence 6778899999999999999999999999999999999999999985421 111 224566777776666
Q ss_pred HhC
Q 020854 268 WIG 270 (320)
Q Consensus 268 ~l~ 270 (320)
.+.
T Consensus 220 l~~ 222 (242)
T 1uay_A 220 ILE 222 (242)
T ss_dssp HHH
T ss_pred Hhc
Confidence 554
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-32 Score=238.92 Aligned_cols=190 Identities=17% Similarity=0.174 Sum_probs=145.9
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHH-cCCC
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI-EGLD 132 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~ 132 (320)
|+++||||++|||+++|++|+++|++|++++|+.++++. .+.+|++|. +.++++.+.+ + +
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~---------------~~~~Dl~~~--~~v~~~~~~~~~--~ 62 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA---------------DLSTAEGRK--QAIADVLAKCSK--G 62 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------------CTTSHHHHH--HHHHHHHTTCTT--C
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc---------------ccccCCCCH--HHHHHHHHHhCC--C
Confidence 689999999999999999999999999999998764321 145677654 5555555555 3 4
Q ss_pred eEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccccc-------------
Q 020854 133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI------------- 199 (320)
Q Consensus 133 id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~------------- 199 (320)
+|+||||||..... +.+++++++|+.|++.+++.++|.|.+++.|+||++||.++...
T Consensus 63 id~lv~~Ag~~~~~---------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~ 133 (257)
T 1fjh_A 63 MDGLVLCAGLGPQT---------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEA 133 (257)
T ss_dssp CSEEEECCCCCTTC---------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHH
T ss_pred CCEEEECCCCCCCc---------ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcc
Confidence 67999999976410 12789999999999999999999998888899999999998721
Q ss_pred -------------CCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc--------------cCC
Q 020854 200 -------------PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK--------------RSS 252 (320)
Q Consensus 200 -------------~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~--------------~~~ 252 (320)
.+.++...|++||++++.++++++.|++++||+|++|+||+++|++.... .+.
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~ 213 (257)
T 1fjh_A 134 GEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPM 213 (257)
T ss_dssp TCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCST
T ss_pred cchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHhccccc
Confidence 13456789999999999999999999999999999999999999986532 011
Q ss_pred CCCCCHHHHHHHHHHHhCC
Q 020854 253 FFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 253 ~~~~~~~~~a~~i~~~l~~ 271 (320)
....+|+++|+.++..+..
T Consensus 214 ~~~~~~~dvA~~~~~l~~~ 232 (257)
T 1fjh_A 214 GRRAEPSEMASVIAFLMSP 232 (257)
T ss_dssp TSCCCTHHHHHHHHHHTSG
T ss_pred CCCCCHHHHHHHHHHHhCc
Confidence 1356788888888777654
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.7e-31 Score=224.82 Aligned_cols=199 Identities=21% Similarity=0.263 Sum_probs=164.6
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCe
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV 133 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 133 (320)
|+++||||+||||++++++|+++ +|++++|+.+++++..+++. . ..+.+|++|. +.++++.+.++ ++
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~----~---~~~~~D~~~~--~~~~~~~~~~~--~i 67 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVG----A---RALPADLADE--LEAKALLEEAG--PL 67 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHT----C---EECCCCTTSH--HHHHHHHHHHC--SE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhcc----C---cEEEeeCCCH--HHHHHHHHhcC--CC
Confidence 57999999999999999999998 99999999988877666552 2 7788999986 55555555544 57
Q ss_pred EEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHHHHH
Q 020854 134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKA 213 (320)
Q Consensus 134 d~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKa 213 (320)
|+||||||.... .++.+.+.+++++++++|+.|++++++.+ .+++.++||++||..+.. +.++...|++||+
T Consensus 68 d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~sS~~~~~--~~~~~~~Y~~sK~ 139 (207)
T 2yut_A 68 DLLVHAVGKAGR--ASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQKGARAVFFGAYPRYV--QVPGFAAYAAAKG 139 (207)
T ss_dssp EEEEECCCCCCC--BCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEEEEEEEEECCCHHHH--SSTTBHHHHHHHH
T ss_pred CEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcCCcEEEEEcChhhcc--CCCCcchHHHHHH
Confidence 899999998754 56778889999999999999999999997 334568999999999987 6678899999999
Q ss_pred HHHHHHHHHHHHHccCCceEEEEeccceecCCCccc-cCCCCCCCHHHHHHHHHHHhCCCC
Q 020854 214 YIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK-RSSFFVPSTDVYARAAMRWIGYEP 273 (320)
Q Consensus 214 al~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~a~~i~~~l~~~~ 273 (320)
+++.++++++.|++++||++++|+||++.|++.... .+.....+|+++|+.++..+..++
T Consensus 140 a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~ 200 (207)
T 2yut_A 140 ALEAYLEAARKELLREGVHLVLVRLPAVATGLWAPLGGPPKGALSPEEAARKVLEGLFREP 200 (207)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGGGGTSCCTTCBCHHHHHHHHHHHHC--C
T ss_pred HHHHHHHHHHHHHhhhCCEEEEEecCcccCCCccccCCCCCCCCCHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999999985532 222456899999999999998764
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-30 Score=249.47 Aligned_cols=210 Identities=16% Similarity=0.133 Sum_probs=174.2
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCe-EEEE-eCC-------------HHHHHHHHHHHHhhcCCceEEEEEEeCCC
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLN-LVLV-GRN-------------PDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~-Vil~-~r~-------------~~~~~~~~~~l~~~~~~~~~~~~~~D~~~ 115 (320)
..|+++|||||++|||+++|++|+++|++ |+++ +|+ .+++++..+++.+. +.++.++.||++|
T Consensus 249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dvtd 326 (525)
T 3qp9_A 249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADL--GATATVVTCDLTD 326 (525)
T ss_dssp CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHH--TCEEEEEECCTTS
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhc--CCEEEEEECCCCC
Confidence 35899999999999999999999999997 7777 898 45567777777765 5679999999998
Q ss_pred CcHHHHHHHHHHHcCC-CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcC
Q 020854 116 DLDEGVERIKEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGS 193 (320)
Q Consensus 116 ~~~~~~~~~~~~~~~~-~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS 193 (320)
. +.++++.+.+... ++|+||||||+... .++.+.+.+++++++++|+.|++++.+.+.|.+.+++ .++||++||
T Consensus 327 ~--~~v~~~~~~i~~~g~id~vVh~AGv~~~--~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS 402 (525)
T 3qp9_A 327 A--EAAARLLAGVSDAHPLSAVLHLPPTVDS--EPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSS 402 (525)
T ss_dssp H--HHHHHHHHTSCTTSCEEEEEECCCCCCC--CCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEE
T ss_pred H--HHHHHHHHHHHhcCCCcEEEECCcCCCC--CchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECC
Confidence 6 6666666655322 68899999999865 6788999999999999999999999999999998776 799999999
Q ss_pred ccccccCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc-------ccCCCCCCCHHHHHHHHH
Q 020854 194 GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI-------KRSSFFVPSTDVYARAAM 266 (320)
Q Consensus 194 ~~~~~~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~-------~~~~~~~~~~~~~a~~i~ 266 (320)
.++.. +.++.+.|++||+++++|+ .+++..||++++|+||+++|+|... .......++|++.++.+.
T Consensus 403 ~a~~~--g~~g~~~YaaaKa~l~~lA----~~~~~~gi~v~sI~pG~~~tgm~~~~~~~~~~~~~g~~~l~pee~a~~l~ 476 (525)
T 3qp9_A 403 VAAIW--GGAGQGAYAAGTAFLDALA----GQHRADGPTVTSVAWSPWEGSRVTEGATGERLRRLGLRPLAPATALTALD 476 (525)
T ss_dssp GGGTT--CCTTCHHHHHHHHHHHHHH----TSCCSSCCEEEEEEECCBTTSGGGSSHHHHHHHHTTBCCBCHHHHHHHHH
T ss_pred HHHcC--CCCCCHHHHHHHHHHHHHH----HHHHhCCCCEEEEECCccccccccchhhHHHHHhcCCCCCCHHHHHHHHH
Confidence 99998 7899999999999998874 5677889999999999999999831 122334589999999999
Q ss_pred HHhCCC
Q 020854 267 RWIGYE 272 (320)
Q Consensus 267 ~~l~~~ 272 (320)
..+..+
T Consensus 477 ~~l~~~ 482 (525)
T 3qp9_A 477 TALGHG 482 (525)
T ss_dssp HHHHHT
T ss_pred HHHhCC
Confidence 999766
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-30 Score=219.89 Aligned_cols=187 Identities=15% Similarity=0.177 Sum_probs=160.6
Q ss_pred CC-EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 53 GS-WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 53 gk-~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
|| +++||||+||||++++++|+ +|++|++++|+.+ .+.+|++|. +.++++.+.++
T Consensus 2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-------------------~~~~D~~~~--~~~~~~~~~~~-- 57 (202)
T 3d7l_A 2 NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-------------------DVTVDITNI--DSIKKMYEQVG-- 57 (202)
T ss_dssp CSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-------------------SEECCTTCH--HHHHHHHHHHC--
T ss_pred CCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-------------------ceeeecCCH--HHHHHHHHHhC--
Confidence 45 79999999999999999999 9999999999864 367899986 66666666664
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHHH
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAAT 211 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~as 211 (320)
++|+||||||.... .++.+.+.+++++.+++|+.+++++++.+.|.|.+ +++||++||..+.. +.++...|++|
T Consensus 58 ~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~~sS~~~~~--~~~~~~~Y~~s 131 (202)
T 3d7l_A 58 KVDAIVSATGSATF--SPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND--KGSFTLTTGIMMED--PIVQGASAAMA 131 (202)
T ss_dssp CEEEEEECCCCCCC--CCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE--EEEEEEECCGGGTS--CCTTCHHHHHH
T ss_pred CCCEEEECCCCCCC--CChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc--CCEEEEEcchhhcC--CCCccHHHHHH
Confidence 57899999997653 56778899999999999999999999999998854 48999999999887 67888999999
Q ss_pred HHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc--ccCCCCCCCHHHHHHHHHHHhC
Q 020854 212 KAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI--KRSSFFVPSTDVYARAAMRWIG 270 (320)
Q Consensus 212 Kaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~--~~~~~~~~~~~~~a~~i~~~l~ 270 (320)
|++++.++++++.|+ ++||++++|+||++.|++... ..+.....+++++|+.++..+.
T Consensus 132 K~~~~~~~~~~~~e~-~~gi~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~ 191 (202)
T 3d7l_A 132 NGAVTAFAKSAAIEM-PRGIRINTVSPNVLEESWDKLEPFFEGFLPVPAAKVARAFEKSVF 191 (202)
T ss_dssp HHHHHHHHHHHTTSC-STTCEEEEEEECCBGGGHHHHGGGSTTCCCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc-cCCeEEEEEecCccCCchhhhhhhccccCCCCHHHHHHHHHHhhh
Confidence 999999999999999 789999999999999997542 2233446799999999888774
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=267.59 Aligned_cols=214 Identities=17% Similarity=0.218 Sum_probs=171.8
Q ss_pred ccccCCCEEEEECCCCc-HHHHHHHHHHHcCCeEEEE-eCCHHHHHHHHHHHHhhcC--CceEEEEEEeCCCCcHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDG-IGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYA--KTQIKSVVVDFSGDLDEGVER 123 (320)
Q Consensus 48 ~~~~~gk~vlITGas~G-IG~ala~~l~~~G~~Vil~-~r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~ 123 (320)
.++++||++|||||++| ||+++|++|+++|++|+++ +|+.+++++..+++.+..+ +.++.++.+|++|. +.+++
T Consensus 670 ~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~--~sV~a 747 (1887)
T 2uv8_A 670 GVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSK--QDVEA 747 (1887)
T ss_dssp CBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCH--HHHHH
T ss_pred cCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCH--HHHHH
Confidence 34577999999999998 9999999999999999998 6888888887777755432 45789999999985 44444
Q ss_pred HHHHHcCC--------CeEEEEEccCCCCCccc-cccCCC--HHHHHHHHHHHhHHHHHHHHHH--hHhhhcCCCcEEEE
Q 020854 124 IKEAIEGL--------DVGVLINNVGISYPYAR-FFHEVD--QVLLKNLIKVNVEGTTKVTQAV--LPGMLKRKKGAIVN 190 (320)
Q Consensus 124 ~~~~~~~~--------~id~lI~nAG~~~~~~~-~~~~~~--~~~~~~~~~~N~~g~~~l~~~~--~~~l~~~~~g~Iv~ 190 (320)
+.+.+... ++|+||||||+... . ++.+.+ .++|++++++|+.|++.+++.+ +|.|.+++.|+||+
T Consensus 748 lv~~i~~~~~~~G~G~~LDiLVNNAGi~~~--~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVn 825 (1887)
T 2uv8_A 748 LIEFIYDTEKNGGLGWDLDAIIPFAAIPEQ--GIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILP 825 (1887)
T ss_dssp HHHHHHSCTTTTSCCCCCSEEEECCCCCCC--SBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEE
T ss_pred HHHHHHHhccccccCCCCeEEEECCCcCCC--CCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEE
Confidence 44443221 47799999998754 4 678888 8999999999999999999998 78888777799999
Q ss_pred EcCccccccCCCCCchhhHHHHHHHHHH-HHHHHHHHccCCceEEEEecccee-cCCCccc--------cCCCCCCCHHH
Q 020854 191 IGSGAAIVIPSDPLYSVYAATKAYIDQF-SRSLYVEYRKSGIDVQCQVPLYVA-TKMASIK--------RSSFFVPSTDV 260 (320)
Q Consensus 191 vsS~~~~~~~~~~~~~~Y~asKaal~~~-~~~l~~el~~~gi~v~~v~PG~v~-T~~~~~~--------~~~~~~~~~~~ 260 (320)
+||.++.. + +...|++||+|+.+| ++.++.|+++. |+||+|+||+++ |+|.... ..+....+|++
T Consensus 826 ISS~ag~~--g--g~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~~~~~~~~~~~~~plr~~sPEE 900 (1887)
T 2uv8_A 826 MSPNHGTF--G--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANNIIAEGIEKMGVRTFSQKE 900 (1887)
T ss_dssp ECSCTTCS--S--CBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC-----CCTTHHHHHTTSCCCEEHHH
T ss_pred EcChHhcc--C--CCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccccchhHHHHHHhcCCCCCCHHH
Confidence 99999987 3 678999999999999 99999999887 999999999999 8886420 11113458999
Q ss_pred HHHHHHHHhC
Q 020854 261 YARAAMRWIG 270 (320)
Q Consensus 261 ~a~~i~~~l~ 270 (320)
+|+.++..+.
T Consensus 901 VA~avlfLaS 910 (1887)
T 2uv8_A 901 MAFNLLGLLT 910 (1887)
T ss_dssp HHHHHHGGGS
T ss_pred HHHHHHHHhC
Confidence 9999887654
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.6e-30 Score=263.85 Aligned_cols=216 Identities=17% Similarity=0.209 Sum_probs=174.3
Q ss_pred cccccCCCEEEEECCCCc-HHHHHHHHHHHcCCeEEEE-eCCHHHHHHHHHHHHhhcC--CceEEEEEEeCCCCcHHHHH
Q 020854 47 KNLRKYGSWALVTGPTDG-IGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYA--KTQIKSVVVDFSGDLDEGVE 122 (320)
Q Consensus 47 ~~~~~~gk~vlITGas~G-IG~ala~~l~~~G~~Vil~-~r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~ 122 (320)
..++++||++|||||++| ||+++|++|+++|++|+++ +|+.+++++..+++.+..+ +.++..+.+|++|. +.++
T Consensus 470 ~~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~--esVe 547 (1688)
T 2pff_A 470 XXVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSK--QDVE 547 (1688)
T ss_dssp SCCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSST--THHH
T ss_pred cccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCH--HHHH
Confidence 345678999999999998 9999999999999999998 6877777777776644322 45788999999986 4444
Q ss_pred HHHHHHcCC--------CeEEEEEccCCCCCccc-cccCCC--HHHHHHHHHHHhHHHHHHHHHH--hHhhhcCCCcEEE
Q 020854 123 RIKEAIEGL--------DVGVLINNVGISYPYAR-FFHEVD--QVLLKNLIKVNVEGTTKVTQAV--LPGMLKRKKGAIV 189 (320)
Q Consensus 123 ~~~~~~~~~--------~id~lI~nAG~~~~~~~-~~~~~~--~~~~~~~~~~N~~g~~~l~~~~--~~~l~~~~~g~Iv 189 (320)
++.+.+... ++|+||||||+... . ++.+.+ .++|++++++|+.|++.+++.+ .|.|.+++.|+||
T Consensus 548 aLVe~I~e~~~~~GfG~~IDILVNNAGI~~~--g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIV 625 (1688)
T 2pff_A 548 ALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQ--GIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVIL 625 (1688)
T ss_dssp HHHHHHHSCTTSSSCCCCCCEEECCCCCCCC--SBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECC
T ss_pred HHHHHHHHhccccccCCCCeEEEECCCcCCC--CCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEE
Confidence 444443221 47799999998654 4 678888 8999999999999999999999 8888877779999
Q ss_pred EEcCccccccCCCCCchhhHHHHHHHHHH-HHHHHHHHccCCceEEEEecccee-cCCCccc--------cCCCCCCCHH
Q 020854 190 NIGSGAAIVIPSDPLYSVYAATKAYIDQF-SRSLYVEYRKSGIDVQCQVPLYVA-TKMASIK--------RSSFFVPSTD 259 (320)
Q Consensus 190 ~vsS~~~~~~~~~~~~~~Y~asKaal~~~-~~~l~~el~~~gi~v~~v~PG~v~-T~~~~~~--------~~~~~~~~~~ 259 (320)
++||.++.. + +...|++||+|+.+| .+.++.|+++. |+||+|+||+++ |+|.... ..+....+|+
T Consensus 626 nISSiAG~~--G--g~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~~~e~~~~~l~~iplR~~sPE 700 (1688)
T 2pff_A 626 PMSPNHGTF--G--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANNIIAEGIEKMGVRTFSQK 700 (1688)
T ss_dssp CCCSCTTTS--S--CBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSCTTTTCSTTTSSSSCCCCCCC
T ss_pred EEEChHhcc--C--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccCCchHHHHHHHhCCCCCCCHH
Confidence 999999987 3 578999999999999 88889888877 999999999999 7885420 0111345899
Q ss_pred HHHHHHHHHhCC
Q 020854 260 VYARAAMRWIGY 271 (320)
Q Consensus 260 ~~a~~i~~~l~~ 271 (320)
++|+.++..+..
T Consensus 701 EVA~aIlFLaSd 712 (1688)
T 2pff_A 701 EMAFNLLGLLTP 712 (1688)
T ss_dssp TTHHHHHHHTST
T ss_pred HHHHHHHHHhCC
Confidence 999999887753
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-28 Score=260.02 Aligned_cols=213 Identities=17% Similarity=0.202 Sum_probs=170.9
Q ss_pred cccCCCEEEEECCCCc-HHHHHHHHHHHcCCeEEEEe-CCHHHHHHHHHHHHhhcC--CceEEEEEEeCCCCcHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDG-IGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYA--KTQIKSVVVDFSGDLDEGVERI 124 (320)
Q Consensus 49 ~~~~gk~vlITGas~G-IG~ala~~l~~~G~~Vil~~-r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~ 124 (320)
++++||++|||||++| ||+++|++|+++|++|++++ |+.+++++..+++.+... +.++.++.||++|. +.++++
T Consensus 648 m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~--esV~al 725 (1878)
T 2uv9_A 648 LTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSK--QDVEAL 725 (1878)
T ss_dssp BCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCH--HHHHHH
T ss_pred CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCH--HHHHHH
Confidence 4577999999999999 99999999999999999995 777777777766644322 45789999999986 555555
Q ss_pred HHHHcCC------CeEEEEEccCCCCCccc-cccCCC--HHHHHHHHHHHhHHHHHHHHH--HhHhhhcCCCcEEEEEcC
Q 020854 125 KEAIEGL------DVGVLINNVGISYPYAR-FFHEVD--QVLLKNLIKVNVEGTTKVTQA--VLPGMLKRKKGAIVNIGS 193 (320)
Q Consensus 125 ~~~~~~~------~id~lI~nAG~~~~~~~-~~~~~~--~~~~~~~~~~N~~g~~~l~~~--~~~~l~~~~~g~Iv~vsS 193 (320)
.+.+... ++|+||||||+... . ++.+.+ .++|++++++|+.|++++++. ++|.|.+++.|+||++||
T Consensus 726 v~~i~~~~~~~G~~IDiLVnNAGi~~~--~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS 803 (1878)
T 2uv9_A 726 VNYIYDTKNGLGWDLDYVVPFAAIPEN--GREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSP 803 (1878)
T ss_dssp HHHHHCSSSSCCCCCSEEEECCCCCCT--TCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECS
T ss_pred HHHHHHhhcccCCCCcEEEeCcccccC--CCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcc
Confidence 5543222 47799999998754 4 678888 899999999999999999987 778887777799999999
Q ss_pred ccccccCCCCCchhhHHHHHHHHHHHHHHHHH-HccCCceEEEEecccee-cCCCcc--------ccCCCCCCCHHHHHH
Q 020854 194 GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE-YRKSGIDVQCQVPLYVA-TKMASI--------KRSSFFVPSTDVYAR 263 (320)
Q Consensus 194 ~~~~~~~~~~~~~~Y~asKaal~~~~~~l~~e-l~~~gi~v~~v~PG~v~-T~~~~~--------~~~~~~~~~~~~~a~ 263 (320)
.++.. + +...|++||+|+++|++.++.+ +++. |+||+|+||+++ |+|... ...+....+|+++|+
T Consensus 804 ~ag~~--g--g~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~~~~~~~~~~~~~plr~~sPeEVA~ 878 (1878)
T 2uv9_A 804 NHGTF--G--NDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMSANNLVAEGVEKLGVRTFSQQEMAF 878 (1878)
T ss_dssp CSSSS--S--CCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCSHHHHTHHHHHTTTCCCBCHHHHHH
T ss_pred hhhcc--C--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCcccccchhhHHHHHhcCCCCCCHHHHHH
Confidence 99987 3 4678999999999999876654 7766 999999999999 998652 011113458999999
Q ss_pred HHHHHhC
Q 020854 264 AAMRWIG 270 (320)
Q Consensus 264 ~i~~~l~ 270 (320)
.++..+.
T Consensus 879 avlfLaS 885 (1878)
T 2uv9_A 879 NLLGLMA 885 (1878)
T ss_dssp HHHHHHS
T ss_pred HHHHHhC
Confidence 9877653
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-27 Score=228.42 Aligned_cols=205 Identities=18% Similarity=0.209 Sum_probs=166.7
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCH---HHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP---DKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
|+++|||||++|||+++|++|+++|+ +|++++|+. +..++..+++.+. +.++.++.||++|. +.++++.+.+
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dvtd~--~~v~~~~~~i 314 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQL--GVRVTIAACDAADR--EALAALLAEL 314 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCH--HHHHHHHHTC
T ss_pred CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhc--CCeEEEEEccCCCH--HHHHHHHHHH
Confidence 59999999999999999999999999 899999974 3466777777664 56899999999986 6666666655
Q ss_pred cC-CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 129 EG-LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 129 ~~-~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
.. .++|+||||||+... ..++.+.+.+++++++++|+.|++++.+.+.+. ..++||++||.++.. +.++.+.
T Consensus 315 ~~~g~ld~vVh~AGv~~~-~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~----~~~~iV~~SS~a~~~--g~~g~~~ 387 (496)
T 3mje_A 315 PEDAPLTAVFHSAGVAHD-DAPVADLTLGQLDALMRAKLTAARHLHELTADL----DLDAFVLFSSGAAVW--GSGGQPG 387 (496)
T ss_dssp CTTSCEEEEEECCCCCCS-CCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS----CCSEEEEEEEHHHHT--TCTTCHH
T ss_pred HHhCCCeEEEECCcccCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc----CCCEEEEEeChHhcC--CCCCcHH
Confidence 43 268999999998732 367889999999999999999999999987653 568999999999998 7899999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc--------ccCCCCCCCHHHHHHHHHHHhCCC
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI--------KRSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~--------~~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
|++||+++++|++.+ +..||++++|+||++.++.... .......++|++.++.+...+..+
T Consensus 388 YaAaKa~ldala~~~----~~~Gi~v~sV~pG~w~~~gm~~~~~~~~~l~~~g~~~l~pe~~~~~l~~~l~~~ 456 (496)
T 3mje_A 388 YAAANAYLDALAEHR----RSLGLTASSVAWGTWGEVGMATDPEVHDRLVRQGVLAMEPEHALGALDQMLEND 456 (496)
T ss_dssp HHHHHHHHHHHHHHH----HHTTCCCEEEEECEESSSCC------CHHHHHTTEEEECHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHH----HhcCCeEEEEECCcccCCccccChHHHHHHHhcCCCCCCHHHHHHHHHHHHcCC
Confidence 999999999887754 4679999999999886654331 111223468999999988888765
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.95 E-value=3e-28 Score=245.44 Aligned_cols=204 Identities=19% Similarity=0.224 Sum_probs=172.8
Q ss_pred CCCEEEEECCCCcHHHHHHHHHH-HcCC-eEEEEeCC---HHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLA-KTGL-NLVLVGRN---PDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKE 126 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~-~~G~-~Vil~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 126 (320)
.||+++||||++|||+++|++|+ ++|+ +|++++|+ .++.++..+++++. +.++..+.||++|. +.++++.+
T Consensus 529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--G~~v~~~~~Dvsd~--~~v~~~~~ 604 (795)
T 3slk_A 529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAY--GAEVSLQACDVADR--ETLAKVLA 604 (795)
T ss_dssp TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCH--HHHHHHHH
T ss_pred cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhc--CCcEEEEEeecCCH--HHHHHHHH
Confidence 58999999999999999999999 7999 59999999 45567777888765 57899999999986 66666666
Q ss_pred HHcC-CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCc
Q 020854 127 AIEG-LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 127 ~~~~-~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
.... .++|+||||||+..+ .++.+++.++|++++++|+.|++++.+.+.|.| +||++||.++.. +.+++
T Consensus 605 ~~~~~~~id~lVnnAGv~~~--~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l------~iV~~SS~ag~~--g~~g~ 674 (795)
T 3slk_A 605 SIPDEHPLTAVVHAAGVLDD--GVSESLTVERLDQVLRPKVDGARNLLELIDPDV------ALVLFSSVSGVL--GSGGQ 674 (795)
T ss_dssp TSCTTSCEEEEEECCCCCCC--CCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS------EEEEEEETHHHH--TCSSC
T ss_pred HHHHhCCCEEEEECCCcCCC--CchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC------EEEEEccHHhcC--CCCCC
Confidence 5532 379999999999875 678999999999999999999999999998877 799999999999 78999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc----------ccCCCCCCCHHHHHHHHHHHhCCCC
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI----------KRSSFFVPSTDVYARAAMRWIGYEP 273 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~----------~~~~~~~~~~~~~a~~i~~~l~~~~ 273 (320)
+.|++||+ |+++|+.+++++||++|+|+||+++|++... .......+++++..+.+...+..++
T Consensus 675 ~~YaAaka----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~~~~~~~~~~~g~~~l~~~e~~~~~~~~l~~~~ 748 (795)
T 3slk_A 675 GNYAAANS----FLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLREAEQDRLARSGLLPISTEEGLSQFDAACGGAH 748 (795)
T ss_dssp HHHHHHHH----HHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHHHHHHHHHHHTTBCCCCHHHHHHHHHHHHTSSC
T ss_pred HHHHHHHH----HHHHHHHHHHHcCCeEEEEECCeECcchhhccccHHHHHHHHhcCCCCCCHHHHHHHHHHHHhCCC
Confidence 99999995 6777777888899999999999999886431 1223346789999999999888773
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.7e-27 Score=208.81 Aligned_cols=192 Identities=18% Similarity=0.182 Sum_probs=151.2
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCe
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV 133 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 133 (320)
|+++||||+||||++++++|+++|++|++++|+.++++. .+.+|++|. +.++++.+.+. .++
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------------~~~~D~~~~--~~~~~~~~~~~-~~~ 63 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA---------------DLSTPGGRE--TAVAAVLDRCG-GVL 63 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------------CTTSHHHHH--HHHHHHHHHHT-TCC
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc---------------cccCCcccH--HHHHHHHHHcC-CCc
Confidence 689999999999999999999999999999998754211 144566654 45556655551 146
Q ss_pred EEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCC------------
Q 020854 134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS------------ 201 (320)
Q Consensus 134 d~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~------------ 201 (320)
|+||||||.... .+.+++++++|+.|++++++.+.|.|.+++.++||++||..+...+.
T Consensus 64 d~vi~~Ag~~~~---------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~ 134 (255)
T 2dkn_A 64 DGLVCCAGVGVT---------AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAG 134 (255)
T ss_dssp SEEEECCCCCTT---------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHT
T ss_pred cEEEECCCCCCc---------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhccc
Confidence 699999997542 11268899999999999999999999887789999999999876210
Q ss_pred ------------CCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc------------c--CCCCC
Q 020854 202 ------------DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK------------R--SSFFV 255 (320)
Q Consensus 202 ------------~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~------------~--~~~~~ 255 (320)
.++...|++||++++.+++.++.|+++.|+++++++||++.|++.... . +....
T Consensus 135 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (255)
T 2dkn_A 135 DEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVAPLGRG 214 (255)
T ss_dssp CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTTHHHHHSCCCTTSSC
T ss_pred chhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhhHHHHHHHHHHhcCC
Confidence 145678999999999999999999999999999999999999875421 0 22235
Q ss_pred CCHHHHHHHHHHHhCCC
Q 020854 256 PSTDVYARAAMRWIGYE 272 (320)
Q Consensus 256 ~~~~~~a~~i~~~l~~~ 272 (320)
.+++++|+.++..+..+
T Consensus 215 ~~~~dva~~~~~l~~~~ 231 (255)
T 2dkn_A 215 SEPREVAEAIAFLLGPQ 231 (255)
T ss_dssp BCHHHHHHHHHHHHSGG
T ss_pred CCHHHHHHHHHHHhCCC
Confidence 68888888888877643
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=7e-26 Score=217.75 Aligned_cols=203 Identities=18% Similarity=0.200 Sum_probs=168.8
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHH---HHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPD---KLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA 127 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 127 (320)
.++++|||||+||||++++++|+++|+ +|++++|+.. ..++..+++.+. +.++.++.||++|. +.++++.+.
T Consensus 258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dvtd~--~~v~~~~~~ 333 (511)
T 2z5l_A 258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGH--GCEVVHAACDVAER--DALAALVTA 333 (511)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTT--TCEEEEEECCSSCH--HHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhc--CCEEEEEEeCCCCH--HHHHHHHhc
Confidence 579999999999999999999999999 6999999874 456667777654 56799999999986 556666555
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
+ ++|+||||||+... .++.+.+.++++.++++|+.|++++.+.+.+. .+.++||++||.++.. +.++...
T Consensus 334 -~--~ld~VVh~AGv~~~--~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~---~~~~~~V~~SS~a~~~--g~~g~~~ 403 (511)
T 2z5l_A 334 -Y--PPNAVFHTAGILDD--AVIDTLSPESFETVRGAKVCGAELLHQLTADI---KGLDAFVLFSSVTGTW--GNAGQGA 403 (511)
T ss_dssp -S--CCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC---TTCCCEEEEEEGGGTT--CCTTBHH
T ss_pred -C--CCcEEEECCcccCC--cccccCCHHHHHHHHHHHHHHHHHHHHHHhhc---cCCCEEEEEeCHHhcC--CCCCCHH
Confidence 3 56799999998765 66788999999999999999999999876442 1568999999999988 7788999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccce-ecCCCccc------cCCCCCCCHHHHHHHHHHHhCCC
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYV-ATKMASIK------RSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v-~T~~~~~~------~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
|+++|++++.|++.+ +..|+++++|+||++ +|+|.... ......++++++++.+...+..+
T Consensus 404 YaaaKa~ld~la~~~----~~~gi~v~sv~pG~~~~tgm~~~~~~~~~~~~g~~~l~~e~~a~~l~~al~~~ 471 (511)
T 2z5l_A 404 YAAANAALDALAERR----RAAGLPATSVAWGLWGGGGMAAGAGEESLSRRGLRAMDPDAAVDALLGAMGRN 471 (511)
T ss_dssp HHHHHHHHHHHHHHH----HTTTCCCEEEEECCBCSTTCCCCHHHHHHHHHTBCCBCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHH----HHcCCcEEEEECCcccCCcccccccHHHHHhcCCCCCCHHHHHHHHHHHHhCC
Confidence 999999999998865 356999999999999 88887531 12334689999999999999876
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=5.3e-26 Score=217.66 Aligned_cols=205 Identities=20% Similarity=0.192 Sum_probs=165.1
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCe-EEEEeCCHH---HHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLN-LVLVGRNPD---KLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA 127 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~-Vil~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 127 (320)
.++++|||||+||||++++++|+++|++ |++++|+.. ..++..+++.+. +.++.++.+|++|. +.++++.+.
T Consensus 225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dv~d~--~~v~~~~~~ 300 (486)
T 2fr1_A 225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL--GARTTVAACDVTDR--ESVRELLGG 300 (486)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCH--HHHHHHHHT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhc--CCEEEEEEeCCCCH--HHHHHHHHH
Confidence 5799999999999999999999999995 999999875 456666777654 46789999999986 556666655
Q ss_pred HcCC-CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 128 IEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 128 ~~~~-~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
+... ++|+||||||.... .++.+.+.+++++++++|+.|++++.+.+.+ .+.++||++||.++.. +.++..
T Consensus 301 i~~~g~ld~VIh~AG~~~~--~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~----~~~~~~V~~SS~a~~~--g~~g~~ 372 (486)
T 2fr1_A 301 IGDDVPLSAVFHAAATLDD--GTVDTLTGERIERASRAKVLGARNLHELTRE----LDLTAFVLFSSFASAF--GAPGLG 372 (486)
T ss_dssp SCTTSCEEEEEECCCCCCC--CCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----SCCSEEEEEEEHHHHT--CCTTCT
T ss_pred HHhcCCCcEEEECCccCCC--CccccCCHHHHHHHHHHHHHHHHHHHHHhCc----CCCCEEEEEcChHhcC--CCCCCH
Confidence 5322 68999999998764 6688899999999999999999999998754 3578999999999988 778899
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecC-CCccc------cCCCCCCCHHHHHHHHHHHhCCC
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATK-MASIK------RSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~-~~~~~------~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
.|+++|+++++|++.+ +..|+++++|+||.+.++ |.... ......++++++++.+...+..+
T Consensus 373 ~Yaaaka~l~~la~~~----~~~gi~v~~i~pG~~~~~gm~~~~~~~~~~~~g~~~i~~e~~a~~l~~~l~~~ 441 (486)
T 2fr1_A 373 GYAPGNAYLDGLAQQR----RSDGLPATAVAWGTWAGSGMAEGPVADRFRRHGVIEMPPETACRALQNALDRA 441 (486)
T ss_dssp TTHHHHHHHHHHHHHH----HHTTCCCEEEEECCBC------------CTTTTEECBCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHH----HhcCCeEEEEECCeeCCCcccchhHHHHHHhcCCCCCCHHHHHHHHHHHHhCC
Confidence 9999999999886654 456999999999999886 54321 11223679999999999999876
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.2e-25 Score=244.23 Aligned_cols=188 Identities=13% Similarity=0.135 Sum_probs=140.0
Q ss_pred cCCCEEEEECCCCc-HHHHHHHHHHHcCCeEEEEeCCHHH-----HHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHH
Q 020854 51 KYGSWALVTGPTDG-IGKSFAFQLAKTGLNLVLVGRNPDK-----LKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERI 124 (320)
Q Consensus 51 ~~gk~vlITGas~G-IG~ala~~l~~~G~~Vil~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~ 124 (320)
++||++|||||++| ||+++|+.|+++|++|++++|+.++ ++++.+++... +.++..+++|++|. +.++++
T Consensus 2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~--G~~~~~v~~Dvtd~--~~v~~l 2209 (3089)
T 3zen_D 2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARF--DATLWVVPANMASY--SDIDKL 2209 (3089)
T ss_dssp CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCT--TCEEEEEECCTTCH--HHHHHH
T ss_pred CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhc--CCeEEEEEecCCCH--HHHHHH
Confidence 67999999999999 9999999999999999999998766 55555555332 45788999999985 444444
Q ss_pred HHHHcC------CCeEEEEEccCCCC---CccccccCCCHHHH----HHHHHHHhHHHHHHHHHHhHhhhcCCCc----E
Q 020854 125 KEAIEG------LDVGVLINNVGISY---PYARFFHEVDQVLL----KNLIKVNVEGTTKVTQAVLPGMLKRKKG----A 187 (320)
Q Consensus 125 ~~~~~~------~~id~lI~nAG~~~---~~~~~~~~~~~~~~----~~~~~~N~~g~~~l~~~~~~~l~~~~~g----~ 187 (320)
.+.... ..+|+||||||+.. +......+.+.++| +..+++|+.+++.+++.+.|.|..++.+ .
T Consensus 2210 v~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~i 2289 (3089)
T 3zen_D 2210 VEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHV 2289 (3089)
T ss_dssp HHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEE
T ss_pred HHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEE
Confidence 443322 14779999999721 11122223333333 4559999999999999999999876542 3
Q ss_pred EEEEcCccccccCCCCCchhhHHHHHHHHHHHHHHHHH--HccCCceEEEEecccee-cCCCc
Q 020854 188 IVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE--YRKSGIDVQCQVPLYVA-TKMAS 247 (320)
Q Consensus 188 Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~~~~~l~~e--l~~~gi~v~~v~PG~v~-T~~~~ 247 (320)
|++.||..+. .++...|++||+|+.+|+++|+.| ++ .+|+||+|+||+|+ |++..
T Consensus 2290 i~~~ss~~g~----~g~~~aYsASKaAl~~LtrslA~E~~~a-~~IrVn~v~PG~v~tT~l~~ 2347 (3089)
T 3zen_D 2290 VLPGSPNRGM----FGGDGAYGEAKSALDALENRWSAEKSWA-ERVSLAHALIGWTKGTGLMG 2347 (3089)
T ss_dssp EEEECSSTTS----CSSCSSHHHHGGGHHHHHHHHHHCSTTT-TTEEEEEEECCCEECSTTTT
T ss_pred EEECCccccc----CCCchHHHHHHHHHHHHHHHHHhccccC-CCeEEEEEeecccCCCcccc
Confidence 4444444433 245668999999999999999999 65 46999999999999 77654
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=9.2e-25 Score=193.52 Aligned_cols=185 Identities=16% Similarity=0.132 Sum_probs=146.7
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
++|+++||||+||||++++++|+++|++|++++|+..+.+ ...+..+.+|++|. +.++++.+
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~--~~~~~~~~----- 63 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA-----------GPNEECVQCDLADA--NAVNAMVA----- 63 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC-----------CTTEEEEECCTTCH--HHHHHHHT-----
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc-----------CCCCEEEEcCCCCH--HHHHHHHc-----
Confidence 4689999999999999999999999999999999975432 34688999999986 44444433
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccccc----------CC
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI----------PS 201 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~----------~~ 201 (320)
++|+||||||.... +.+++++++|+.|++++++++.+ ++.++||++||..+... .+
T Consensus 64 ~~D~vi~~Ag~~~~----------~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iv~~SS~~~~g~~~~~~~~~e~~~ 129 (267)
T 3rft_A 64 GCDGIVHLGGISVE----------KPFEQILQGNIIGLYNLYEAARA----HGQPRIVFASSNHTIGYYPQTERLGPDVP 129 (267)
T ss_dssp TCSEEEECCSCCSC----------CCHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEEEEGGGGTTSBTTSCBCTTSC
T ss_pred CCCEEEECCCCcCc----------CCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEcchHHhCCCCCCCCCCCCCC
Confidence 46699999997421 23688899999999999999843 46789999999888731 12
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCC
Q 020854 202 DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 202 ~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
.+....|+.||++.+.+++.++.++ |+++++|.||.+.+++..... ...+..++++++.+...+..+
T Consensus 130 ~~~~~~Y~~sK~~~e~~~~~~a~~~---g~~~~~vr~~~v~~~~~~~~~-~~~~~~~~d~a~~~~~~~~~~ 196 (267)
T 3rft_A 130 ARPDGLYGVSKCFGENLARMYFDKF---GQETALVRIGSCTPEPNNYRM-LSTWFSHDDFVSLIEAVFRAP 196 (267)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECBCSSSCCSTTH-HHHBCCHHHHHHHHHHHHHCS
T ss_pred CCCCChHHHHHHHHHHHHHHHHHHh---CCeEEEEEeecccCCCCCCCc-eeeEEcHHHHHHHHHHHHhCC
Confidence 3445789999999999999999885 799999999999888765311 122468999999988887654
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-23 Score=182.42 Aligned_cols=185 Identities=17% Similarity=0.172 Sum_probs=143.7
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceE-EEEEEeCCCCcHHHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQI-KSVVVDFSGDLDEGVERIKE 126 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~ 126 (320)
..+++|++++|||||||||++++++|+++|++|++++|+.+++++..+ ..+ ..+.+|+++. +.+
T Consensus 16 ~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~--------~~~~~~~~~Dl~~~-------~~~ 80 (236)
T 3e8x_A 16 NLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE--------RGASDIVVANLEED-------FSH 80 (236)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH--------TTCSEEEECCTTSC-------CGG
T ss_pred ccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh--------CCCceEEEcccHHH-------HHH
Confidence 345789999999999999999999999999999999999988765432 246 7888998832 333
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCC---C
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD---P 203 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~---~ 203 (320)
.+++ +|+||||||.... ++++..+++|+.++.++++++.. ++.++||++||..+.. +. +
T Consensus 81 ~~~~--~D~vi~~ag~~~~----------~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~--~~~~~~ 142 (236)
T 3e8x_A 81 AFAS--IDAVVFAAGSGPH----------TGADKTILIDLWGAIKTIQEAEK----RGIKRFIMVSSVGTVD--PDQGPM 142 (236)
T ss_dssp GGTT--CSEEEECCCCCTT----------SCHHHHHHTTTHHHHHHHHHHHH----HTCCEEEEECCTTCSC--GGGSCG
T ss_pred HHcC--CCEEEECCCCCCC----------CCccccchhhHHHHHHHHHHHHH----cCCCEEEEEecCCCCC--CCCChh
Confidence 4444 5699999997532 23678899999999999999743 4568999999977765 22 3
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc-------cCCCCCCCHHHHHHHHHHHhCCC
Q 020854 204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK-------RSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 204 ~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~-------~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
....|+.+|++++.+.+ ..|++++++.||++.++..... .......+++++|+.++..+..+
T Consensus 143 ~~~~Y~~sK~~~e~~~~-------~~gi~~~~lrpg~v~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~ 211 (236)
T 3e8x_A 143 NMRHYLVAKRLADDELK-------RSSLDYTIVRPGPLSNEESTGKVTVSPHFSEITRSITRHDVAKVIAELVDQQ 211 (236)
T ss_dssp GGHHHHHHHHHHHHHHH-------HSSSEEEEEEECSEECSCCCSEEEEESSCSCCCCCEEHHHHHHHHHHHTTCG
T ss_pred hhhhHHHHHHHHHHHHH-------HCCCCEEEEeCCcccCCCCCCeEEeccCCCcccCcEeHHHHHHHHHHHhcCc
Confidence 57899999999998875 4689999999999999976521 11244679999999999999765
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.5e-22 Score=176.17 Aligned_cols=183 Identities=14% Similarity=0.115 Sum_probs=136.5
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
+++|+++||||+||||++++++|+++|+ +|++++|+.++.++.. ...+..+.+|++|. +. +.+.+
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~--------~~~~~~~~~D~~d~--~~---~~~~~ 82 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA--------YKNVNQEVVDFEKL--DD---YASAF 82 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG--------GGGCEEEECCGGGG--GG---GGGGG
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc--------cCCceEEecCcCCH--HH---HHHHh
Confidence 4589999999999999999999999999 9999999876543211 12467889999875 22 22233
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
. ++|+||||||.... .+.++..+++|+.++..+++++. +.+.++||++||..+.. +....|
T Consensus 83 ~--~~d~vi~~ag~~~~---------~~~~~~~~~~n~~~~~~~~~~~~----~~~~~~iv~~SS~~~~~----~~~~~Y 143 (242)
T 2bka_A 83 Q--GHDVGFCCLGTTRG---------KAGAEGFVRVDRDYVLKSAELAK----AGGCKHFNLLSSKGADK----SSNFLY 143 (242)
T ss_dssp S--SCSEEEECCCCCHH---------HHHHHHHHHHHTHHHHHHHHHHH----HTTCCEEEEECCTTCCT----TCSSHH
T ss_pred c--CCCEEEECCCcccc---------cCCcccceeeeHHHHHHHHHHHH----HCCCCEEEEEccCcCCC----CCcchH
Confidence 3 46699999996432 13457889999999998888753 45568999999988865 234679
Q ss_pred HHHHHHHHHHHHHHHHHHccCCc-eEEEEeccceecCCCcc------------ccC----CCCCCCHHHHHHHHHHHhCC
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGI-DVQCQVPLYVATKMASI------------KRS----SFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi-~v~~v~PG~v~T~~~~~------------~~~----~~~~~~~~~~a~~i~~~l~~ 271 (320)
+++|++++.+++.+ ++ ++++|+||.+.|++... ..+ .....+++++|+.++..+..
T Consensus 144 ~~sK~~~e~~~~~~-------~~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~ 216 (242)
T 2bka_A 144 LQVKGEVEAKVEEL-------KFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVR 216 (242)
T ss_dssp HHHHHHHHHHHHTT-------CCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHhc-------CCCCeEEEcCceecCCCCCCcHHHHHHHHhhcccCccccCCcccCHHHHHHHHHHHHhC
Confidence 99999999998754 46 79999999999996431 011 11245778888888877765
Q ss_pred C
Q 020854 272 E 272 (320)
Q Consensus 272 ~ 272 (320)
+
T Consensus 217 ~ 217 (242)
T 2bka_A 217 P 217 (242)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.87 E-value=3.1e-21 Score=175.90 Aligned_cols=200 Identities=17% Similarity=0.191 Sum_probs=150.8
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEE-EEeCCCCcHHHHHHHHHHHc
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSV-VVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~ 129 (320)
++|++++||||+|+||++++++|+++|++|++++|+.++.+...+.+.... +.++..+ .+|++|. +.++++ +.
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~--~~~~~~---~~ 82 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY-PGRFETAVVEDMLKQ--GAYDEV---IK 82 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS-TTTEEEEECSCTTST--TTTTTT---TT
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccC-CCceEEEEecCCcCh--HHHHHH---Hc
Confidence 568999999999999999999999999999999999887776665554432 2457777 7899875 222222 22
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCC--------
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS-------- 201 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~-------- 201 (320)
++|+||||||.... . ++.++.+++|+.|+.++++++.+. .+.++||++||.+....+.
T Consensus 83 --~~d~vih~A~~~~~--~-------~~~~~~~~~n~~g~~~ll~~~~~~---~~~~~iv~~SS~~~~~~~~~~~~~~~~ 148 (342)
T 1y1p_A 83 --GAAGVAHIASVVSF--S-------NKYDEVVTPAIGGTLNALRAAAAT---PSVKRFVLTSSTVSALIPKPNVEGIYL 148 (342)
T ss_dssp --TCSEEEECCCCCSC--C-------SCHHHHHHHHHHHHHHHHHHHHTC---TTCCEEEEECCGGGTCCCCTTCCCCEE
T ss_pred --CCCEEEEeCCCCCC--C-------CCHHHHHHHHHHHHHHHHHHHHhC---CCCcEEEEeccHHHhcCCCCCCCCccc
Confidence 46699999997542 1 124678899999999999998652 3458999999987753110
Q ss_pred ---------------------CCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcccc----------
Q 020854 202 ---------------------DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKR---------- 250 (320)
Q Consensus 202 ---------------------~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~---------- 250 (320)
......|+.||++.+.+++.++.++.. |++++++.||.+.++......
T Consensus 149 ~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~ 227 (342)
T 1y1p_A 149 DEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFDPETQSGSTSGWMM 227 (342)
T ss_dssp CTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSCTTTCCCHHHHHHH
T ss_pred CccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCCCCCCCCCccHHHHHH
Confidence 012367999999999999999999865 899999999999998643110
Q ss_pred --------------CCCCCCCHHHHHHHHHHHhCC
Q 020854 251 --------------SSFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 251 --------------~~~~~~~~~~~a~~i~~~l~~ 271 (320)
.......++++|+.++..+..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~ 262 (342)
T 1y1p_A 228 SLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVL 262 (342)
T ss_dssp HHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHC
T ss_pred HHHcCCCccccccCCcCCEeEHHHHHHHHHHHHcC
Confidence 111246789999999888754
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=5.3e-21 Score=164.32 Aligned_cols=172 Identities=11% Similarity=0.150 Sum_probs=131.6
Q ss_pred CCEEEEECCCCcHHHHHHHHHH-HcCCeEEEEeCCHH-HHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLA-KTGLNLVLVGRNPD-KLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~-~~G~~Vil~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|+++||||+||||++++++|+ ++|++|++++|+.+ ++++.. .. ...+..+.+|++|. +.++ +.+.
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~--~~~~~~~~~D~~d~--~~~~---~~~~- 72 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----ID--HERVTVIEGSFQNP--GXLE---QAVT- 72 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HT--STTEEEEECCTTCH--HHHH---HHHT-
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cC--CCceEEEECCCCCH--HHHH---HHHc-
Confidence 4789999999999999999999 89999999999988 655443 11 45688899999986 3333 3344
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch----
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS---- 206 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~---- 206 (320)
++|+||||||.. |+. ++.+++.+++++.++||++||..+.. +.+...
T Consensus 73 -~~d~vv~~ag~~---------------------n~~-----~~~~~~~~~~~~~~~iv~iSs~~~~~--~~~~~~~~~~ 123 (221)
T 3r6d_A 73 -NAEVVFVGAMES---------------------GSD-----MASIVKALSRXNIRRVIGVSMAGLSG--EFPVALEKWT 123 (221)
T ss_dssp -TCSEEEESCCCC---------------------HHH-----HHHHHHHHHHTTCCEEEEEEETTTTS--CSCHHHHHHH
T ss_pred -CCCEEEEcCCCC---------------------Chh-----HHHHHHHHHhcCCCeEEEEeeceecC--CCCccccccc
Confidence 356999999842 222 78888888888889999999998876 444433
Q ss_pred ------hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCC-Ccc----c---cCCCCCCCHHHHHHHHHHHh--C
Q 020854 207 ------VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKM-ASI----K---RSSFFVPSTDVYARAAMRWI--G 270 (320)
Q Consensus 207 ------~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~-~~~----~---~~~~~~~~~~~~a~~i~~~l--~ 270 (320)
.|+.+|.+++.+.+. .|+++++|+||++.++. ... . .......+++++|+.++..+ .
T Consensus 124 ~~~~~~~y~~~K~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~ 196 (221)
T 3r6d_A 124 FDNLPISYVQGERQARNVLRE-------SNLNYTILRLTWLYNDPEXTDYELIPEGAQFNDAQVSREAVVKAIFDILHAA 196 (221)
T ss_dssp HHTSCHHHHHHHHHHHHHHHH-------SCSEEEEEEECEEECCTTCCCCEEECTTSCCCCCEEEHHHHHHHHHHHHTCS
T ss_pred ccccccHHHHHHHHHHHHHHh-------CCCCEEEEechhhcCCCCCcceeeccCCccCCCceeeHHHHHHHHHHHHHhc
Confidence 899999999887653 68999999999999883 221 0 11112568899999999998 5
Q ss_pred CC
Q 020854 271 YE 272 (320)
Q Consensus 271 ~~ 272 (320)
.+
T Consensus 197 ~~ 198 (221)
T 3r6d_A 197 DE 198 (221)
T ss_dssp CC
T ss_pred Ch
Confidence 54
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3.2e-21 Score=176.94 Aligned_cols=196 Identities=18% Similarity=0.171 Sum_probs=153.1
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHc-CC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKT-GL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~-G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
++||+++||||+|+||++++++|+++ |+ +|++++|++.+.++..+++. ...+.++.+|++|. +. +.+.+
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~----~~~v~~~~~Dl~d~--~~---l~~~~ 89 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN----DPRMRFFIGDVRDL--ER---LNYAL 89 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC----CTTEEEEECCTTCH--HH---HHHHT
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc----CCCEEEEECCCCCH--HH---HHHHH
Confidence 67999999999999999999999999 98 99999999988776665552 34688999999986 33 33334
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
. ++|+||||||.... +. ......+.+++|+.|+.++++++.+. +.++||++||..+.. + ...|
T Consensus 90 ~--~~D~Vih~Aa~~~~---~~---~~~~~~~~~~~Nv~gt~~l~~aa~~~----~v~~~V~~SS~~~~~--p---~~~Y 152 (344)
T 2gn4_A 90 E--GVDICIHAAALKHV---PI---AEYNPLECIKTNIMGASNVINACLKN----AISQVIALSTDKAAN--P---INLY 152 (344)
T ss_dssp T--TCSEEEECCCCCCH---HH---HHHSHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEECCGGGSS--C---CSHH
T ss_pred h--cCCEEEECCCCCCC---Cc---hhcCHHHHHHHHHHHHHHHHHHHHhC----CCCEEEEecCCccCC--C---ccHH
Confidence 4 46699999997542 11 12234678999999999999998764 467999999987754 2 4689
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc-----------cc--------cCCCCCCCHHHHHHHHHHHh
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS-----------IK--------RSSFFVPSTDVYARAAMRWI 269 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~-----------~~--------~~~~~~~~~~~~a~~i~~~l 269 (320)
++||++.+.++++++.++++.|++++++.||.+.++... .. .....+..++++|+.++..+
T Consensus 153 ~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l 232 (344)
T 2gn4_A 153 GATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSL 232 (344)
T ss_dssp HHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSHHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCHHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHH
Confidence 999999999999999988888999999999999876421 00 00112568899999999888
Q ss_pred CCC
Q 020854 270 GYE 272 (320)
Q Consensus 270 ~~~ 272 (320)
..+
T Consensus 233 ~~~ 235 (344)
T 2gn4_A 233 KRM 235 (344)
T ss_dssp HHC
T ss_pred hhc
Confidence 643
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-21 Score=178.78 Aligned_cols=205 Identities=16% Similarity=0.085 Sum_probs=148.0
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
+|++++||||+|+||++++++|+++|++|++++|+.++.+. +.+........+.++.+|++|. +.++++.+..
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~d~--~~~~~~~~~~--- 74 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELGIENDVKIIHMDLLEF--SNIIRTIEKV--- 74 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTTCTTTEEECCCCTTCH--HHHHHHHHHH---
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhccccCceeEEECCCCCH--HHHHHHHHhc---
Confidence 47899999999999999999999999999999998765321 1222222234678889999975 4555554443
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccccc---------CCC
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI---------PSD 202 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~---------~~~ 202 (320)
++|+||||||.... +.+.++++..+++|+.|+.++++++... ...++||++||.+.+.. .+.
T Consensus 75 ~~d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~e~~~~ 145 (345)
T 2z1m_A 75 QPDEVYNLAAQSFV------GVSFEQPILTAEVDAIGVLRILEALRTV---KPDTKFYQASTSEMFGKVQEIPQTEKTPF 145 (345)
T ss_dssp CCSEEEECCCCCCH------HHHTTSHHHHHHHHTHHHHHHHHHHHHH---CTTCEEEEEEEGGGGCSCSSSSBCTTSCC
T ss_pred CCCEEEECCCCcch------hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCceEEEEechhhcCCCCCCCCCccCCC
Confidence 46799999997532 1223456788999999999999998752 11479999999865421 122
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHc---cCCceEEEEeccceecCCCc-----------ccc--------C-CCCCCCHH
Q 020854 203 PLYSVYAATKAYIDQFSRSLYVEYR---KSGIDVQCQVPLYVATKMAS-----------IKR--------S-SFFVPSTD 259 (320)
Q Consensus 203 ~~~~~Y~asKaal~~~~~~l~~el~---~~gi~v~~v~PG~v~T~~~~-----------~~~--------~-~~~~~~~~ 259 (320)
.....|+.||++.+.+++.++.++. ..++.++.+.||...|.+.. ... + ......++
T Consensus 146 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 225 (345)
T 2z1m_A 146 YPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAP 225 (345)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHH
T ss_pred CCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHH
Confidence 3467899999999999999999875 33566777889988776421 000 0 11256899
Q ss_pred HHHHHHHHHhCCC
Q 020854 260 VYARAAMRWIGYE 272 (320)
Q Consensus 260 ~~a~~i~~~l~~~ 272 (320)
++|+.++..+..+
T Consensus 226 Dva~a~~~~~~~~ 238 (345)
T 2z1m_A 226 EYVEAMWLMMQQP 238 (345)
T ss_dssp HHHHHHHHHHTSS
T ss_pred HHHHHHHHHHhCC
Confidence 9999999988754
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=6.3e-22 Score=218.62 Aligned_cols=175 Identities=13% Similarity=0.084 Sum_probs=130.7
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCe-EEEEeCCHHHH---HHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLN-LVLVGRNPDKL---KDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~-Vil~~r~~~~~---~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
.+|+++||||++|||+++|+.|+++|++ |++++|+..+. .+..+++.+. +.++..+.||++|. +++.++++.
T Consensus 1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~~ 1960 (2512)
T 2vz8_A 1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQ--GVQVLVSTSNASSLDGARSLITEAT 1960 (2512)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHT--TCEEEEECCCSSSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhC--CCEEEEEecCCCCHHHHHHHHHHHH
Confidence 5899999999999999999999999997 88899986543 3445555443 56788999999985 234444443
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCc
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
.++ ++|+||||||+... .++.+++.++|++++++|+.|++++.+.+.+.|.. .|+||++||.++.. +.++.
T Consensus 1961 -~~g--~id~lVnnAgv~~~--~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~--~g~iV~iSS~ag~~--g~~g~ 2031 (2512)
T 2vz8_A 1961 -QLG--PVGGVFNLAMVLRD--AVLENQTPEFFQDVSKPKYSGTANLDRVTREACPE--LDYFVIFSSVSCGR--GNAGQ 2031 (2512)
T ss_dssp -HHS--CEEEEEECCCC------------------CTTTTHHHHHHHHHHHHHHCTT--CCEEEEECCHHHHT--TCTTC
T ss_pred -hcC--CCcEEEECCCcCCC--CchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhccc--CCEEEEecchhhcC--CCCCc
Confidence 243 58899999998764 67889999999999999999999999999998754 38999999999998 78899
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccce
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYV 241 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v 241 (320)
+.|++||+++++|++.++.+ |....++..|.+
T Consensus 2032 ~~Y~aaKaal~~l~~~rr~~----Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A 2032 ANYGFANSAMERICEKRRHD----GLPGLAVQWGAI 2063 (2512)
T ss_dssp HHHHHHHHHHHHHHHHHHHT----TSCCCEEEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHC----CCcEEEEEccCc
Confidence 99999999999999987765 677777777654
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.85 E-value=6.5e-21 Score=174.02 Aligned_cols=175 Identities=17% Similarity=0.118 Sum_probs=133.6
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.+++++||||+|+||++++++|+++|++|++++|+.++..+..+++.... +..+..+.+|++|. +.++++.+. .
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~--~~~~~~~~~---~ 77 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKIT-GKTPAFHETDVSDE--RALARIFDA---H 77 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHH-SCCCEEECCCTTCH--HHHHHHHHH---S
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhc-CCCceEEEeecCCH--HHHHHHHhc---c
Confidence 46899999999999999999999999999999998776665555554433 34678889999986 555555443 3
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC---------CC
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------SD 202 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~---------~~ 202 (320)
++|+||||||.... .. ..+...+.+++|+.++.++++.+ .+.+.++||++||.+.+..+ +.
T Consensus 78 ~~d~vih~A~~~~~--~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~ 147 (341)
T 3enk_A 78 PITAAIHFAALKAV--GE----SVAKPIEYYRNNLDSLLSLLRVM----RERAVKRIVFSSSATVYGVPERSPIDETFPL 147 (341)
T ss_dssp CCCEEEECCCCCCH--HH----HHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGBCSCSSSSBCTTSCC
T ss_pred CCcEEEECcccccc--Cc----cccChHHHHHHHHHHHHHHHHHH----HhCCCCEEEEEecceEecCCCCCCCCCCCCC
Confidence 57799999997642 11 22334567889999999887764 44566899999997765311 11
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecC
Q 020854 203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATK 244 (320)
Q Consensus 203 ~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~ 244 (320)
.....|+.||++.+.+++.++.++. |++++++.||.+-.+
T Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~v~G~ 187 (341)
T 3enk_A 148 SATNPYGQTKLMAEQILRDVEAADP--SWRVATLRYFNPVGA 187 (341)
T ss_dssp BCSSHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEECEEECC
T ss_pred CCCChhHHHHHHHHHHHHHHhhcCC--CceEEEEeeccccCC
Confidence 2346899999999999999998852 699999999988766
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=7.6e-21 Score=174.82 Aligned_cols=203 Identities=13% Similarity=0.037 Sum_probs=149.8
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
+++++++||||+|+||++++++|+++|++|++++|+.++.+...+.+. ....+.++.+|++|. +.++++.+..
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~--~~~~~~~~~~-- 79 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR---VADGMQSEIGDIRDQ--NKLLESIREF-- 79 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT---TTTTSEEEECCTTCH--HHHHHHHHHH--
T ss_pred hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc---cCCceEEEEccccCH--HHHHHHHHhc--
Confidence 458999999999999999999999999999999998765444333332 134578889999986 4555554433
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC----------
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------- 200 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~---------- 200 (320)
++|+|||+||.... +.+.++++..+++|+.|+.++++++.+. .+.++||++||.+.+...
T Consensus 80 -~~d~vih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~E~~ 149 (357)
T 1rkx_A 80 -QPEIVFHMAAQPLV------RLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYRENE 149 (357)
T ss_dssp -CCSEEEECCSCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCTTS
T ss_pred -CCCEEEECCCCccc------ccchhCHHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEecCHHHhCCCCcCCCCCCCC
Confidence 46799999996321 2234556788999999999999998763 235799999998753210
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHc------cCCceEEEEeccceecCCCc---------------ccc-------CC
Q 020854 201 SDPLYSVYAATKAYIDQFSRSLYVEYR------KSGIDVQCQVPLYVATKMAS---------------IKR-------SS 252 (320)
Q Consensus 201 ~~~~~~~Y~asKaal~~~~~~l~~el~------~~gi~v~~v~PG~v~T~~~~---------------~~~-------~~ 252 (320)
+......|+.||.+.+.+++.++.++. +.|++++++.||.+.+|-.. ... ..
T Consensus 150 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 229 (357)
T 1rkx_A 150 AMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAI 229 (357)
T ss_dssp CBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCE
T ss_pred CCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCe
Confidence 122457899999999999999999885 45899999999999887431 000 01
Q ss_pred CCCCCHHHHHHHHHHHhC
Q 020854 253 FFVPSTDVYARAAMRWIG 270 (320)
Q Consensus 253 ~~~~~~~~~a~~i~~~l~ 270 (320)
..+...+++|+.++..+.
T Consensus 230 ~~~v~v~Dva~a~~~~~~ 247 (357)
T 1rkx_A 230 RPWQHVLEPLSGYLLLAQ 247 (357)
T ss_dssp ECCEETHHHHHHHHHHHH
T ss_pred eccEeHHHHHHHHHHHHH
Confidence 124567888888877664
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=3.6e-20 Score=169.28 Aligned_cols=173 Identities=15% Similarity=0.070 Sum_probs=132.5
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH-HHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP-DKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
+++|||||+|+||++++++|+++|++|++++|+. ...++..+.+.. ..++..+.+|++|. +.++++.+.. +
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~---~~~~~~~~~Dl~d~--~~~~~~~~~~---~ 73 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS---LGNFEFVHGDIRNK--NDVTRLITKY---M 73 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT---TCCCEEEECCTTCH--HHHHHHHHHH---C
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc---CCceEEEEcCCCCH--HHHHHHHhcc---C
Confidence 5799999999999999999999999999999853 222333344433 23577889999986 5555554432 4
Q ss_pred eEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC------------
Q 020854 133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP------------ 200 (320)
Q Consensus 133 id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~------------ 200 (320)
+|+||||||.... +.+.++++..+++|+.|+.++++++.+.+. +++||++||.+.+...
T Consensus 74 ~d~vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~---~~~iv~~SS~~v~g~~~~~~~~e~~~~~ 144 (347)
T 1orr_A 74 PDSCFHLAGQVAM------TTSIDNPCMDFEINVGGTLNLLEAVRQYNS---NCNIIYSSTNKVYGDLEQYKYNETETRY 144 (347)
T ss_dssp CSEEEECCCCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT---TCEEEEEEEGGGGTTCTTSCEEECSSCE
T ss_pred CCEEEECCcccCh------hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC---CceEEEeccHHHhCCCCcCCcccccccc
Confidence 6699999997432 223445678899999999999999988652 3699999998754310
Q ss_pred -------------CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCC
Q 020854 201 -------------SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMA 246 (320)
Q Consensus 201 -------------~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~ 246 (320)
+......|+.||++.+.+++.++.++ |++++++.||.+.++..
T Consensus 145 ~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~ 200 (347)
T 1orr_A 145 TCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQ 200 (347)
T ss_dssp EETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTC
T ss_pred cccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEccCceeCcCC
Confidence 12246789999999999999999885 89999999999999864
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.85 E-value=9e-21 Score=162.62 Aligned_cols=175 Identities=18% Similarity=0.231 Sum_probs=139.0
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCC-CcHHHHHHHHHHHcCCCe
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG-DLDEGVERIKEAIEGLDV 133 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~i 133 (320)
+++||||+|+||++++++|+++|++|++++|+.++.++. ..+..+.+|++| . +.+.+.+.+ +
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~----------~~~~~~~~D~~d~~-----~~~~~~~~~--~ 64 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY----------NNVKAVHFDVDWTP-----EEMAKQLHG--M 64 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC----------TTEEEEECCTTSCH-----HHHHTTTTT--C
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc----------CCceEEEecccCCH-----HHHHHHHcC--C
Confidence 599999999999999999999999999999998764321 458899999998 4 344444443 6
Q ss_pred EEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCC-------ch
Q 020854 134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL-------YS 206 (320)
Q Consensus 134 d~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~-------~~ 206 (320)
|+||||||.... +.+++|+.++.++++++ ++.+.++||++||..+.. +.+. ..
T Consensus 65 d~vi~~ag~~~~--------------~~~~~n~~~~~~l~~a~----~~~~~~~iv~~SS~~~~~--~~~~~e~~~~~~~ 124 (219)
T 3dqp_A 65 DAIINVSGSGGK--------------SLLKVDLYGAVKLMQAA----EKAEVKRFILLSTIFSLQ--PEKWIGAGFDALK 124 (219)
T ss_dssp SEEEECCCCTTS--------------SCCCCCCHHHHHHHHHH----HHTTCCEEEEECCTTTTC--GGGCCSHHHHHTH
T ss_pred CEEEECCcCCCC--------------CcEeEeHHHHHHHHHHH----HHhCCCEEEEECcccccC--CCccccccccccc
Confidence 699999997642 14568899998888886 345567999999988876 3444 67
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc----cCCCCCCCHHHHHHHHHHHhCCC
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK----RSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~----~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
.|+.+|++.+.+.+ ...|++++++.||.+.++..... .......+++++|+.++..+..+
T Consensus 125 ~Y~~sK~~~e~~~~------~~~~i~~~ilrp~~v~g~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~ 188 (219)
T 3dqp_A 125 DYYIAKHFADLYLT------KETNLDYTIIQPGALTEEEATGLIDINDEVSASNTIGDVADTIKELVMTD 188 (219)
T ss_dssp HHHHHHHHHHHHHH------HSCCCEEEEEEECSEECSCCCSEEEESSSCCCCEEHHHHHHHHHHHHTCG
T ss_pred HHHHHHHHHHHHHH------hccCCcEEEEeCceEecCCCCCccccCCCcCCcccHHHHHHHHHHHHhCc
Confidence 89999999998876 36799999999999998865431 23344679999999999999865
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.8e-20 Score=168.41 Aligned_cols=192 Identities=19% Similarity=0.181 Sum_probs=143.5
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.+.+++|||||+|+||++++++|+++|++|++++|+.+. +. + .+.++.+|++|. +.++++.+.
T Consensus 10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l-------~~~~~~~Dl~d~--~~~~~~~~~--- 72 (321)
T 2pk3_A 10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P-------NVEMISLDIMDS--QRVKKVISD--- 72 (321)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T-------TEEEEECCTTCH--HHHHHHHHH---
T ss_pred cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c-------eeeEEECCCCCH--HHHHHHHHh---
Confidence 457899999999999999999999999999999998764 21 1 477889999975 445554443
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC----------
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------- 200 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~---------- 200 (320)
.++|+||||||.... +.+.++++..+++|+.|+.++++++ +.+ .+.++||++||.+.+...
T Consensus 73 ~~~d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~--~~~~~iv~~SS~~v~g~~~~~~~~~~E~ 143 (321)
T 2pk3_A 73 IKPDYIFHLAAKSSV------KDSWLNKKGTFSTNVFGTLHVLDAV-RDS--NLDCRILTIGSSEEYGMILPEESPVSEE 143 (321)
T ss_dssp HCCSEEEECCSCCCH------HHHTTCHHHHHHHHHHHHHHHHHHH-HHH--TCCCEEEEEEEGGGTBSCCGGGCSBCTT
T ss_pred cCCCEEEEcCcccch------hhhhhcHHHHHHHHHHHHHHHHHHH-HHh--CCCCeEEEEccHHhcCCCCCCCCCCCCC
Confidence 246699999997542 1122346788999999999999998 544 246899999998765421
Q ss_pred -CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc------------c---c---C---------C
Q 020854 201 -SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI------------K---R---S---------S 252 (320)
Q Consensus 201 -~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~------------~---~---~---------~ 252 (320)
+.+....|+.||++.+.+++.++.++ |++++++.||.+.+|.... . . + .
T Consensus 144 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 220 (321)
T 2pk3_A 144 NQLRPMSPYGVSKASVGMLARQYVKAY---GMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAV 220 (321)
T ss_dssp SCCBCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCE
T ss_pred CCCCCCCccHHHHHHHHHHHHHHHHHc---CCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcE
Confidence 12346789999999999999999874 8999999999998876431 0 0 0 0
Q ss_pred CCCCCHHHHHHHHHHHhCC
Q 020854 253 FFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 253 ~~~~~~~~~a~~i~~~l~~ 271 (320)
.....++++|+.++..+..
T Consensus 221 ~~~v~v~Dva~a~~~~~~~ 239 (321)
T 2pk3_A 221 RDFTDVRDIVQAYWLLSQY 239 (321)
T ss_dssp EEEEEHHHHHHHHHHHHHH
T ss_pred EeeEEHHHHHHHHHHHHhC
Confidence 1135788999988887753
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=4.6e-20 Score=160.90 Aligned_cols=192 Identities=15% Similarity=0.049 Sum_probs=137.9
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHc--CCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKT--GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~--G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
.+++++||||+|+||++++++|+++ |++|++++|+.++.++. ...+..+.+|++|. +.+++ .+.
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~---------~~~~~~~~~D~~d~--~~~~~---~~~ 68 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI---------GGEADVFIGDITDA--DSINP---AFQ 68 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT---------TCCTTEEECCTTSH--HHHHH---HHT
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc---------CCCeeEEEecCCCH--HHHHH---HHc
Confidence 4789999999999999999999999 89999999998765432 23466788999875 33333 344
Q ss_pred CCCeEEEEEccCCCCCccc-------cccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCC
Q 020854 130 GLDVGVLINNVGISYPYAR-------FFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD 202 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~-------~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~ 202 (320)
+ +|+||||||....... ...+.+.+.+++.+++|+.++.++++++.. .+.++||++||..+.. +.
T Consensus 69 ~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~iv~~SS~~~~~--~~ 140 (253)
T 1xq6_A 69 G--IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV----AGVKHIVVVGSMGGTN--PD 140 (253)
T ss_dssp T--CSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHH----HTCSEEEEEEETTTTC--TT
T ss_pred C--CCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHH----cCCCEEEEEcCccCCC--CC
Confidence 3 5699999997542100 001122233456789999999999888754 3457999999988765 22
Q ss_pred CCc-----hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc------c-----cCCCCCCCHHHHHHHHH
Q 020854 203 PLY-----SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI------K-----RSSFFVPSTDVYARAAM 266 (320)
Q Consensus 203 ~~~-----~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~------~-----~~~~~~~~~~~~a~~i~ 266 (320)
+.. ..|+.+|++++.+.+. .|++++++.||.+.++.... . .......+++++|+.++
T Consensus 141 ~~~~~~~~~~y~~sK~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dva~~~~ 213 (253)
T 1xq6_A 141 HPLNKLGNGNILVWKRKAEQYLAD-------SGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCI 213 (253)
T ss_dssp CGGGGGGGCCHHHHHHHHHHHHHT-------SSSCEEEEEECEEECSCSSSSCEEEESTTGGGGSSCCEEEHHHHHHHHH
T ss_pred CccccccchhHHHHHHHHHHHHHh-------CCCceEEEecceeecCCcchhhhhccCCcCCcCCCCcEEcHHHHHHHHH
Confidence 222 2467799999888752 68999999999999886431 0 01122468999999999
Q ss_pred HHhCCC
Q 020854 267 RWIGYE 272 (320)
Q Consensus 267 ~~l~~~ 272 (320)
..+..+
T Consensus 214 ~~~~~~ 219 (253)
T 1xq6_A 214 QALLFE 219 (253)
T ss_dssp HHTTCG
T ss_pred HHHcCc
Confidence 988754
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=6.5e-19 Score=164.41 Aligned_cols=179 Identities=18% Similarity=0.094 Sum_probs=131.4
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHH----------------HHHHHHHhhcCCceEEEEEEeCC
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK----------------DVSDSIQAKYAKTQIKSVVVDFS 114 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~----------------~~~~~l~~~~~~~~~~~~~~D~~ 114 (320)
.++..||||||+|.||.+++++|+++|++|++++|+..... +..+.+.... ...+.++.+|++
T Consensus 9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~v~~~~~Dl~ 87 (404)
T 1i24_A 9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT-GKSIELYVGDIC 87 (404)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH-CCCCEEEESCTT
T ss_pred cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhcc-CCceEEEECCCC
Confidence 56899999999999999999999999999999998754321 1111111111 345788899999
Q ss_pred CCcHHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCC-cEEEEEcC
Q 020854 115 GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKK-GAIVNIGS 193 (320)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~-g~Iv~vsS 193 (320)
|. +.++++.+.. ++|+||||||.... . ....+++.+..++++|+.|+.++++++.+. +. .+||++||
T Consensus 88 d~--~~~~~~~~~~---~~D~Vih~A~~~~~--~-~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~~~~V~~SS 155 (404)
T 1i24_A 88 DF--EFLAESFKSF---EPDSVVHFGEQRSA--P-YSMIDRSRAVYTQHNNVIGTLNVLFAIKEF----GEECHLVKLGT 155 (404)
T ss_dssp SH--HHHHHHHHHH---CCSEEEECCSCCCH--H-HHTSCHHHHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEECC
T ss_pred CH--HHHHHHHhcc---CCCEEEECCCCCCc--c-chhhCccchhhhHHHHHHHHHHHHHHHHHh----CCCcEEEEeCc
Confidence 75 4455554433 46699999997542 1 112356667789999999999999998653 23 59999999
Q ss_pred ccccccC----------------------CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCC
Q 020854 194 GAAIVIP----------------------SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKM 245 (320)
Q Consensus 194 ~~~~~~~----------------------~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~ 245 (320)
.+.+..+ +......|+.||++.+.+++.++.++ |++++++.||.|.+|-
T Consensus 156 ~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivrp~~v~Gp~ 226 (404)
T 1i24_A 156 MGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVK 226 (404)
T ss_dssp GGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSC
T ss_pred HHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEecceeeCCC
Confidence 8654311 12235689999999999999998876 8999999999998774
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=6.2e-20 Score=168.49 Aligned_cols=202 Identities=15% Similarity=0.046 Sum_probs=147.4
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHH----HHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD----KLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERI 124 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~----~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~ 124 (320)
+++.+++++||||+|+||++++++|+++|++|++++|+.. .+++..+++.... ...+.++.+|++|. +.++++
T Consensus 23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~--~~~~~~ 99 (352)
T 1sb8_A 23 LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQ-WSNFKFIQGDIRNL--DDCNNA 99 (352)
T ss_dssp HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHH-HTTEEEEECCTTSH--HHHHHH
T ss_pred cCccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhccccc-CCceEEEECCCCCH--HHHHHH
Confidence 3456899999999999999999999999999999999753 3333332221110 13578889999875 333333
Q ss_pred HHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCC--
Q 020854 125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD-- 202 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~-- 202 (320)
+. ++|+|||+||.... . .+.++++..+++|+.++.++++++.+ .+.++||++||.+.+...+.
T Consensus 100 ---~~--~~d~vih~A~~~~~--~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~~~~ 164 (352)
T 1sb8_A 100 ---CA--GVDYVLHQAALGSV--P----RSINDPITSNATNIDGFLNMLIAARD----AKVQSFTYAASSSTYGDHPGLP 164 (352)
T ss_dssp ---HT--TCSEEEECCSCCCH--H----HHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGTTCCCSS
T ss_pred ---hc--CCCEEEECCcccCc--h----hhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHhcCCCCCCC
Confidence 33 46699999997532 1 13345678899999999999999865 35679999999887652111
Q ss_pred -------CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc-----------------ccC-------
Q 020854 203 -------PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI-----------------KRS------- 251 (320)
Q Consensus 203 -------~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~-----------------~~~------- 251 (320)
.....|+.||++.+.+++.++.++ |++++++.||.+.++.... ..+
T Consensus 165 ~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g 241 (352)
T 1sb8_A 165 KVEDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDG 241 (352)
T ss_dssp BCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSS
T ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCC
Confidence 135689999999999999998875 7999999999998875321 000
Q ss_pred --CCCCCCHHHHHHHHHHHhCC
Q 020854 252 --SFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 252 --~~~~~~~~~~a~~i~~~l~~ 271 (320)
.......+++|+.++..+..
T Consensus 242 ~~~~~~i~v~Dva~a~~~~~~~ 263 (352)
T 1sb8_A 242 ETSRDFCYIENTVQANLLAATA 263 (352)
T ss_dssp CCEECCEEHHHHHHHHHHHHTC
T ss_pred CceEeeEEHHHHHHHHHHHHhc
Confidence 01245789999998887754
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.3e-20 Score=171.57 Aligned_cols=195 Identities=12% Similarity=0.130 Sum_probs=138.9
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
.++|++++||||+|+||++++++|+++|++|++++|+.+...+..+++ ..+..+.+|++|. +.++++.+.+
T Consensus 17 ~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l------~~v~~~~~Dl~d~--~~~~~~~~~~- 87 (330)
T 2pzm_A 17 RGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV------AGLSVIEGSVTDA--GLLERAFDSF- 87 (330)
T ss_dssp TTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC------TTEEEEECCTTCH--HHHHHHHHHH-
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc------CCceEEEeeCCCH--HHHHHHHhhc-
Confidence 466999999999999999999999999999999999754322111111 3577889999985 4455554444
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCC---C---
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD---P--- 203 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~---~--- 203 (320)
++|+||||||.... . +.++++ +++|+.++.++++++.. .+.++||++||.+.+..... +
T Consensus 88 --~~D~vih~A~~~~~--~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~~~~~~~~~~~~E 152 (330)
T 2pzm_A 88 --KPTHVVHSAAAYKD--P-----DDWAED--AATNVQGSINVAKAASK----AGVKRLLNFQTALCYGRPATVPIPIDS 152 (330)
T ss_dssp --CCSEEEECCCCCSC--T-----TCHHHH--HHHHTHHHHHHHHHHHH----HTCSEEEEEEEGGGGCSCSSSSBCTTC
T ss_pred --CCCEEEECCccCCC--c-----cccChh--HHHHHHHHHHHHHHHHH----cCCCEEEEecCHHHhCCCccCCCCcCC
Confidence 46699999997542 1 334455 89999999999999874 34679999999987652111 2
Q ss_pred ---CchhhHHHHHHHHHHHHHHHHHHccCCce-EEEEeccceecCCCcc-------ccC------CCCCCCHHHHHH-HH
Q 020854 204 ---LYSVYAATKAYIDQFSRSLYVEYRKSGID-VQCQVPLYVATKMASI-------KRS------SFFVPSTDVYAR-AA 265 (320)
Q Consensus 204 ---~~~~Y~asKaal~~~~~~l~~el~~~gi~-v~~v~PG~v~T~~~~~-------~~~------~~~~~~~~~~a~-~i 265 (320)
....|+.||++.+.+++.+ ++....+| ++.+.||. .|++... ... ......++++|+ .+
T Consensus 153 ~~~~~~~Y~~sK~~~e~~~~~~--~~~~~~iR~~~v~gp~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~a~ 229 (330)
T 2pzm_A 153 PTAPFTSYGISKTAGEAFLMMS--DVPVVSLRLANVTGPRL-AIGPIPTFYKRLKAGQKCFCSDTVRDFLDMSDFLAIAD 229 (330)
T ss_dssp CCCCCSHHHHHHHHHHHHHHTC--SSCEEEEEECEEECTTC-CSSHHHHHHHHHHTTCCCCEESCEECEEEHHHHHHHHH
T ss_pred CCCCCChHHHHHHHHHHHHHHc--CCCEEEEeeeeeECcCC-CCCHHHHHHHHHHcCCEEeCCCCEecceeHHHHHHHHH
Confidence 4678999999999999887 44444566 56666764 3443210 000 123468999999 99
Q ss_pred HHHhCC
Q 020854 266 MRWIGY 271 (320)
Q Consensus 266 ~~~l~~ 271 (320)
+..+..
T Consensus 230 ~~~~~~ 235 (330)
T 2pzm_A 230 LSLQEG 235 (330)
T ss_dssp HHTSTT
T ss_pred HHHhhc
Confidence 988865
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.8e-19 Score=164.83 Aligned_cols=174 Identities=16% Similarity=0.163 Sum_probs=129.5
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHH------HHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK------LKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKE 126 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~------~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 126 (320)
+|+++||||+|+||.+++++|+++|++|++++|+... ..+..+++.+.. +..+..+.+|++|. +.++++.+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~--~~~~~~~~ 78 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT-GRSVEFEEMDILDQ--GALQRLFK 78 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH-TCCCEEEECCTTCH--HHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhcc-CCceEEEECCCCCH--HHHHHHHH
Confidence 5889999999999999999999999999999985432 222233333211 34578889999985 44555444
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccccc-------
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI------- 199 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~------- 199 (320)
. .++|+|||+||.... . .+.++.++.+++|+.++.++++++. +.+.++||++||.+.+..
T Consensus 79 ~---~~~d~vih~A~~~~~--~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~iv~~SS~~~~g~~~~~~~~ 145 (348)
T 1ek6_A 79 K---YSFMAVIHFAGLKAV--G----ESVQKPLDYYRVNLTGTIQLLEIMK----AHGVKNLVFSSSATVYGNPQYLPLD 145 (348)
T ss_dssp H---CCEEEEEECCSCCCH--H----HHHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEEEEGGGGCSCSSSSBC
T ss_pred h---cCCCEEEECCCCcCc--c----chhhchHHHHHHHHHHHHHHHHHHH----HhCCCEEEEECcHHHhCCCCCCCcC
Confidence 3 268899999997542 1 1234567889999999999998753 345679999999876531
Q ss_pred ---CCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecC
Q 020854 200 ---PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATK 244 (320)
Q Consensus 200 ---~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~ 244 (320)
+..|....|+.||++.+.+++.++.+ ..++++..+.|+.+-.+
T Consensus 146 E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~ 191 (348)
T 1ek6_A 146 EAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGA 191 (348)
T ss_dssp TTSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECC
T ss_pred CCCCCCCCCCchHHHHHHHHHHHHHHHhc--CCCcceEEEeeccccCC
Confidence 11233678999999999999999887 34699999999887654
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=99.82 E-value=9e-20 Score=166.18 Aligned_cols=191 Identities=10% Similarity=-0.024 Sum_probs=142.0
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHH-HcCCeEEEEeCCHHH------------HHHHHHHHHhhcCCceEEEEEEeCCCC
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLA-KTGLNLVLVGRNPDK------------LKDVSDSIQAKYAKTQIKSVVVDFSGD 116 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~-~~G~~Vil~~r~~~~------------~~~~~~~l~~~~~~~~~~~~~~D~~~~ 116 (320)
...+|+|||||||+|||+|++..|+ +.|+++++++++.+. .....+++++. +.....+.||++|+
T Consensus 47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~--G~~a~~i~~Dv~d~ 124 (401)
T 4ggo_A 47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKRE--GLYSVTIDGDAFSD 124 (401)
T ss_dssp SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHH--TCCEEEEESCTTSH
T ss_pred cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHc--CCCceeEeCCCCCH
Confidence 4568999999999999999999999 689999999886432 23444555555 56789999999985
Q ss_pred --cHHHHHHHHHHHcCCCeEEEEEccCCCCCcc-----------cc---------------------ccCCCHHHHHHHH
Q 020854 117 --LDEGVERIKEAIEGLDVGVLINNVGISYPYA-----------RF---------------------FHEVDQVLLKNLI 162 (320)
Q Consensus 117 --~~~~~~~~~~~~~~~~id~lI~nAG~~~~~~-----------~~---------------------~~~~~~~~~~~~~ 162 (320)
+++.++++.+++++ +|+||||+|...... +| ++..+.++++.+.
T Consensus 125 e~i~~vi~~i~~~~G~--IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~ 202 (401)
T 4ggo_A 125 EIKAQVIEEAKKKGIK--FDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATV 202 (401)
T ss_dssp HHHHHHHHHHHHTTCC--EEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCC--CCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHH
Confidence 35666777777764 779999999763200 01 1223556665554
Q ss_pred H---HHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEecc
Q 020854 163 K---VNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPL 239 (320)
Q Consensus 163 ~---~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG 239 (320)
. ...++.+...+...+.| .++++++.+|++.+....|......++.+|++|+..++.|+.||++ ++++.++||
T Consensus 203 ~vMg~s~~s~w~~al~~a~ll--a~G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~~--~~a~v~v~~ 278 (401)
T 4ggo_A 203 KVMGGEDWERWIKQLSKEGLL--EEGCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENPS--IRAFVSVNK 278 (401)
T ss_dssp HHHSSHHHHHHHHHHHHTTCE--EEEEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECC
T ss_pred HHHhhhHHHHHHHHHHhhhcc--cCCceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcCC--CcEEEEEcC
Confidence 4 45556666777777766 4579999999988876222223357899999999999999999974 899999999
Q ss_pred ceecCCCcc
Q 020854 240 YVATKMASI 248 (320)
Q Consensus 240 ~v~T~~~~~ 248 (320)
.+.|+....
T Consensus 279 a~vT~Assa 287 (401)
T 4ggo_A 279 GLVTRASAV 287 (401)
T ss_dssp CCCCTTGGG
T ss_pred ccccchhhc
Confidence 999998763
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2.6e-19 Score=163.33 Aligned_cols=200 Identities=17% Similarity=0.181 Sum_probs=138.6
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcC-CceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYA-KTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
.+||++|||||+|+||++++++|+++|++|+++.|+.+..++..+ +.+... ...+.++.+|++|. +.++++ +.
T Consensus 3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~--~~~~~~---~~ 76 (337)
T 2c29_D 3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKH-LLDLPKAETHLTLWKADLADE--GSFDEA---IK 76 (337)
T ss_dssp ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHH-HHTSTTHHHHEEEEECCTTST--TTTHHH---HT
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHH-HHhcccCCCeEEEEEcCCCCH--HHHHHH---Hc
Confidence 357999999999999999999999999999999998764433221 111100 13577889999986 323332 33
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCC-------
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD------- 202 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~------- 202 (320)
+ +|+|||+||... ....++ .+.++++|+.|+.++++++.+.. +.++||++||.++....+.
T Consensus 77 ~--~d~Vih~A~~~~-----~~~~~~--~~~~~~~nv~gt~~ll~a~~~~~---~~~riV~~SS~~~~~~~~~~~~~~~E 144 (337)
T 2c29_D 77 G--CTGVFHVATPMD-----FESKDP--ENEVIKPTIEGMLGIMKSCAAAK---TVRRLVFTSSAGTVNIQEHQLPVYDE 144 (337)
T ss_dssp T--CSEEEECCCCCC-----SSCSSH--HHHTHHHHHHHHHHHHHHHHHHS---CCCEEEEECCGGGTSCSSSCCSEECT
T ss_pred C--CCEEEEeccccC-----CCCCCh--HHHHHHHHHHHHHHHHHHHHhCC---CccEEEEeeeHhhcccCCCCCcccCc
Confidence 3 569999998542 111222 35688999999999999987643 2579999999875431100
Q ss_pred -------------CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccC------------------
Q 020854 203 -------------PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRS------------------ 251 (320)
Q Consensus 203 -------------~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~------------------ 251 (320)
+....|+.||.+.+.+++.++.+ .|++++++.||.+.+|......+
T Consensus 145 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~ 221 (337)
T 2c29_D 145 SCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKE---NNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYS 221 (337)
T ss_dssp TCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---HTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHH
T ss_pred ccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCcccc
Confidence 12346999999999888777654 48999999999999886431100
Q ss_pred ---CCCCCCHHHHHHHHHHHhCC
Q 020854 252 ---SFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 252 ---~~~~~~~~~~a~~i~~~l~~ 271 (320)
......++++|+.++..+..
T Consensus 222 ~~~~~~~i~v~Dva~a~~~~~~~ 244 (337)
T 2c29_D 222 IIRQGQFVHLDDLCNAHIYLFEN 244 (337)
T ss_dssp HHTEEEEEEHHHHHHHHHHHHHC
T ss_pred ccCCCCEEEHHHHHHHHHHHhcC
Confidence 00146889999999888754
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.6e-20 Score=164.52 Aligned_cols=183 Identities=17% Similarity=0.135 Sum_probs=138.3
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
+|+++||||+|+||++++++|+++|++|++++|+.++.. ...+..+.+|++|. +.++++ +.+
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~--~~~~~~---~~~-- 63 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA-----------EAHEEIVACDLADA--QAVHDL---VKD-- 63 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC-----------CTTEEECCCCTTCH--HHHHHH---HTT--
T ss_pred CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc-----------CCCccEEEccCCCH--HHHHHH---HcC--
Confidence 368999999999999999999999999999999875311 12467888999875 333333 343
Q ss_pred eEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCC----------
Q 020854 133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD---------- 202 (320)
Q Consensus 133 id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~---------- 202 (320)
+|+||||||.... +.++..+++|+.++.++++++.+ .+.++||++||.......+.
T Consensus 64 ~d~vi~~a~~~~~----------~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~ 129 (267)
T 3ay3_A 64 CDGIIHLGGVSVE----------RPWNDILQANIIGAYNLYEAARN----LGKPRIVFASSNHTIGYYPRTTRIDTEVPR 129 (267)
T ss_dssp CSEEEECCSCCSC----------CCHHHHHHHTHHHHHHHHHHHHH----TTCCEEEEEEEGGGSTTSBTTSCBCTTSCC
T ss_pred CCEEEECCcCCCC----------CCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCHHHhCCCCCCCCCCCCCCC
Confidence 5699999997521 12477889999999999999764 45679999999877642110
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccce-ecCCCccccCCCCCCCHHHHHHHHHHHhCCC
Q 020854 203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYV-ATKMASIKRSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 203 ~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v-~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
.....|+.||++.+.+++.++. ..|++++++.||.+ .++.... ....+.+++++|+.++..+..+
T Consensus 130 ~~~~~Y~~sK~~~e~~~~~~~~---~~gi~~~~lrp~~v~~~~~~~~--~~~~~~~~~dva~~~~~~~~~~ 195 (267)
T 3ay3_A 130 RPDSLYGLSKCFGEDLASLYYH---KFDIETLNIRIGSCFPKPKDAR--MMATWLSVDDFMRLMKRAFVAP 195 (267)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHH---TTCCCEEEEEECBCSSSCCSHH--HHHHBCCHHHHHHHHHHHHHSS
T ss_pred CCCChHHHHHHHHHHHHHHHHH---HcCCCEEEEeceeecCCCCCCC--eeeccccHHHHHHHHHHHHhCC
Confidence 1247899999999999998864 46899999999997 5553221 1123578999999999988655
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=7.2e-20 Score=168.37 Aligned_cols=199 Identities=16% Similarity=0.053 Sum_probs=145.0
Q ss_pred EEEEECCCCcHHHHHHHHHHHc-CCeEEEEeCCHH--HHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 55 WALVTGPTDGIGKSFAFQLAKT-GLNLVLVGRNPD--KLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~-G~~Vil~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
+++||||+|+||++++++|+++ |++|++++|+.. ..+.. +++. ....+..+.+|++|. +.++++.+..
T Consensus 2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~---~~~~~~~~~~Dl~d~--~~~~~~~~~~--- 72 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDIS---ESNRYNFEHADICDS--AEITRIFEQY--- 72 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTT---TCTTEEEEECCTTCH--HHHHHHHHHH---
T ss_pred EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhh---cCCCeEEEECCCCCH--HHHHHHHhhc---
Confidence 4999999999999999999998 799999998642 22211 1111 134688899999986 4555554432
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-----CcEEEEEcCccccccC------
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-----KGAIVNIGSGAAIVIP------ 200 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-----~g~Iv~vsS~~~~~~~------ 200 (320)
++|+||||||.... +.+.+++++++++|+.|+.++++++.+.|...+ +++||++||.+.+...
T Consensus 73 ~~d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~ 146 (361)
T 1kew_A 73 QPDAVMHLAAESHV------DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEV 146 (361)
T ss_dssp CCSEEEECCSCCCH------HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGS
T ss_pred CCCEEEECCCCcCh------hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccc
Confidence 46699999997531 223445678899999999999999999864322 3599999997643211
Q ss_pred -------------CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc-------------ccC---
Q 020854 201 -------------SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI-------------KRS--- 251 (320)
Q Consensus 201 -------------~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~-------------~~~--- 251 (320)
+.+....|+.||++.+.+++.++.++ |++++++.||.+.++.... ..+
T Consensus 147 ~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~ 223 (361)
T 1kew_A 147 ENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPI 223 (361)
T ss_dssp CTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEE
T ss_pred cccccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceE
Confidence 12345789999999999999999886 7999999999999887421 000
Q ss_pred ------CCCCCCHHHHHHHHHHHhCC
Q 020854 252 ------SFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 252 ------~~~~~~~~~~a~~i~~~l~~ 271 (320)
......++++|+.++..+..
T Consensus 224 ~~~~~~~~~~i~v~Dva~a~~~~~~~ 249 (361)
T 1kew_A 224 YGKGDQIRDWLYVEDHARALHMVVTE 249 (361)
T ss_dssp ETTSCCEEEEEEHHHHHHHHHHHHHH
T ss_pred cCCCceeEeeEEHHHHHHHHHHHHhC
Confidence 01235789999999887753
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=5e-19 Score=164.90 Aligned_cols=175 Identities=19% Similarity=0.155 Sum_probs=130.8
Q ss_pred CCEEEEECCCCcHHHHHHHHHH-HcCCeEEEEeCCHHH---------HHHHHHHHHhhcC---Cce---EEEEEEeCCCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLA-KTGLNLVLVGRNPDK---------LKDVSDSIQAKYA---KTQ---IKSVVVDFSGD 116 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~-~~G~~Vil~~r~~~~---------~~~~~~~l~~~~~---~~~---~~~~~~D~~~~ 116 (320)
+++||||||+|+||++++++|+ ++|++|++++|+... .+...+.+.+... ... +..+.+|++|.
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 81 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence 4689999999999999999999 999999999997654 3333333333221 113 78899999986
Q ss_pred cHHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccc
Q 020854 117 LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAA 196 (320)
Q Consensus 117 ~~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~ 196 (320)
+.++++.+.++ ++|+||||||.... . .+.++++.++++|+.++.++++++. +.+.++||++||.+.
T Consensus 82 --~~~~~~~~~~~--~~d~vih~A~~~~~--~----~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~~~~iv~~SS~~v 147 (397)
T 1gy8_A 82 --DFLNGVFTRHG--PIDAVVHMCAFLAV--G----ESVRDPLKYYDNNVVGILRLLQAML----LHKCDKIIFSSSAAI 147 (397)
T ss_dssp --HHHHHHHHHSC--CCCEEEECCCCCCH--H----HHHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEEEEGGG
T ss_pred --HHHHHHHHhcC--CCCEEEECCCccCc--C----cchhhHHHHHHHHhHHHHHHHHHHH----HhCCCEEEEECCHHH
Confidence 55555555433 26699999997542 1 1345567899999999999999864 345679999999765
Q ss_pred cccCC----------------CCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecC
Q 020854 197 IVIPS----------------DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATK 244 (320)
Q Consensus 197 ~~~~~----------------~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~ 244 (320)
+..+. ......|+.||++.+.+++.++.++ |++++++.||.+-.+
T Consensus 148 ~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v~G~ 208 (397)
T 1gy8_A 148 FGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGA 208 (397)
T ss_dssp TBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECC
T ss_pred hCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEeccceeCC
Confidence 53211 0125789999999999999999886 899999999998655
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.1e-19 Score=165.60 Aligned_cols=195 Identities=14% Similarity=0.025 Sum_probs=141.8
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcC--CeEEEEeCCHH--HHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPD--KLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G--~~Vil~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
+++++||||+|+||++++++|+++| ++|++++|+.. ..+.. +++. ....+..+.+|++|. +.++++.
T Consensus 3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~---~~~~~~~~~~Dl~d~--~~~~~~~--- 73 (336)
T 2hun_A 3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLE---DDPRYTFVKGDVADY--ELVKELV--- 73 (336)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTT---TCTTEEEEECCTTCH--HHHHHHH---
T ss_pred CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhc---cCCceEEEEcCCCCH--HHHHHHh---
Confidence 5679999999999999999999997 89999998642 11111 1111 134688899999986 4444433
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC--------
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP-------- 200 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~-------- 200 (320)
+ ++|+||||||.... +.+.++++..+++|+.|+.++++++.+. ...++||++||.+.+...
T Consensus 74 ~--~~d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~E~ 142 (336)
T 2hun_A 74 R--KVDGVVHLAAESHV------DRSISSPEIFLHSNVIGTYTLLESIRRE---NPEVRFVHVSTDEVYGDILKGSFTEN 142 (336)
T ss_dssp H--TCSEEEECCCCCCH------HHHHHCTHHHHHHHHHHHHHHHHHHHHH---CTTSEEEEEEEGGGGCCCSSSCBCTT
T ss_pred h--CCCEEEECCCCcCh------hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEeccHHHHCCCCCCCcCCC
Confidence 4 46699999997531 1234456788999999999999999875 224799999997654311
Q ss_pred -CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc-------------ccC---------CCCCCC
Q 020854 201 -SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI-------------KRS---------SFFVPS 257 (320)
Q Consensus 201 -~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~-------------~~~---------~~~~~~ 257 (320)
+.+....|+.||++.+.+++.++.++ |++++++.||.+.++.... ..+ ......
T Consensus 143 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 219 (336)
T 2hun_A 143 DRLMPSSPYSATKAASDMLVLGWTRTY---NLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLY 219 (336)
T ss_dssp BCCCCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEE
T ss_pred CCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEE
Confidence 22345789999999999999998874 8999999999998886420 000 012346
Q ss_pred HHHHHHHHHHHhC
Q 020854 258 TDVYARAAMRWIG 270 (320)
Q Consensus 258 ~~~~a~~i~~~l~ 270 (320)
++++|+.++..+.
T Consensus 220 v~Dva~~~~~~~~ 232 (336)
T 2hun_A 220 VEDHVRAIELVLL 232 (336)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 8899998888764
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.81 E-value=2e-19 Score=156.11 Aligned_cols=170 Identities=15% Similarity=0.125 Sum_probs=119.7
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcC-CeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G-~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
...|+++||||+||||++++++|+++| ++|++++|+.+++++. ....+..+.+|++|. +.++ +.+.
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~--------~~~~~~~~~~Dl~d~--~~~~---~~~~ 87 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP--------YPTNSQIIMGDVLNH--AALK---QAMQ 87 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS--------CCTTEEEEECCTTCH--HHHH---HHHT
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc--------ccCCcEEEEecCCCH--HHHH---HHhc
Confidence 446899999999999999999999999 8999999998765431 134688899999986 3333 3344
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCC-----
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL----- 204 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~----- 204 (320)
+ +|+||||+|... . . ..++.+++.+++++.++||++||..+.. +.++
T Consensus 88 ~--~D~vv~~a~~~~----------~---~-----------~~~~~~~~~~~~~~~~~iV~iSS~~~~~--~~~~~~~~~ 139 (236)
T 3qvo_A 88 G--QDIVYANLTGED----------L---D-----------IQANSVIAAMKACDVKRLIFVLSLGIYD--EVPGKFVEW 139 (236)
T ss_dssp T--CSEEEEECCSTT----------H---H-----------HHHHHHHHHHHHTTCCEEEEECCCCC-------------
T ss_pred C--CCEEEEcCCCCc----------h---h-----------HHHHHHHHHHHHcCCCEEEEEecceecC--CCCcccccc
Confidence 4 469999998421 0 0 2356778888888889999999988765 2222
Q ss_pred --------chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc------ccC-CCCCCCHHHHHHHHHHHh
Q 020854 205 --------YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI------KRS-SFFVPSTDVYARAAMRWI 269 (320)
Q Consensus 205 --------~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~------~~~-~~~~~~~~~~a~~i~~~l 269 (320)
...|..+| ..+.+.|+++++|.||++.++.... ..+ ...+.+++++|+.++..+
T Consensus 140 ~~~~~~~~~~~~~~~~-----------~~l~~~gi~~~~vrPg~i~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~ll 208 (236)
T 3qvo_A 140 NNAVIGEPLKPFRRAA-----------DAIEASGLEYTILRPAWLTDEDIIDYELTSRNEPFKGTIVSRKSVAALITDII 208 (236)
T ss_dssp -----CGGGHHHHHHH-----------HHHHTSCSEEEEEEECEEECCSCCCCEEECTTSCCSCSEEEHHHHHHHHHHHH
T ss_pred hhhcccchHHHHHHHH-----------HHHHHCCCCEEEEeCCcccCCCCcceEEeccCCCCCCcEECHHHHHHHHHHHH
Confidence 12233332 2334779999999999999886542 111 122468999999999988
Q ss_pred CCC
Q 020854 270 GYE 272 (320)
Q Consensus 270 ~~~ 272 (320)
..+
T Consensus 209 ~~~ 211 (236)
T 3qvo_A 209 DKP 211 (236)
T ss_dssp HST
T ss_pred cCc
Confidence 765
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.2e-19 Score=165.84 Aligned_cols=204 Identities=16% Similarity=0.135 Sum_probs=146.3
Q ss_pred CcccccCCCEEEEECCCCcHHHHHHHHHHHcC-------CeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcH
Q 020854 46 AKNLRKYGSWALVTGPTDGIGKSFAFQLAKTG-------LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLD 118 (320)
Q Consensus 46 ~~~~~~~gk~vlITGas~GIG~ala~~l~~~G-------~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~ 118 (320)
+.++.++|++|+||||+|+||.+++++|+++| ++|++++|+.++..+ . ....+.++.+|++|.
T Consensus 7 ~~~~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~------~--~~~~~~~~~~Dl~d~-- 76 (342)
T 2hrz_A 7 RENLYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA------G--FSGAVDARAADLSAP-- 76 (342)
T ss_dssp CCCSCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT------T--CCSEEEEEECCTTST--
T ss_pred CCCCCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc------c--cCCceeEEEcCCCCH--
Confidence 34556789999999999999999999999999 899999998653221 0 145688899999986
Q ss_pred HHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC-CCcEEEEEcCcccc
Q 020854 119 EGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSGAAI 197 (320)
Q Consensus 119 ~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-~~g~Iv~vsS~~~~ 197 (320)
+.++++.+ + ++|+||||||.... .+.++++..+++|+.|+.++++++.+...++ +.++||++||.+.+
T Consensus 77 ~~~~~~~~--~--~~d~vih~A~~~~~-------~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~ 145 (342)
T 2hrz_A 77 GEAEKLVE--A--RPDVIFHLAAIVSG-------EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVF 145 (342)
T ss_dssp THHHHHHH--T--CCSEEEECCCCCHH-------HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGC
T ss_pred HHHHHHHh--c--CCCEEEECCccCcc-------cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhh
Confidence 44444433 2 46699999996531 2345678899999999999999987754221 25799999999776
Q ss_pred ccCCCC----------CchhhHHHHHHHHHHHHHHHHHH--ccCCceEEEEe--ccceecCCCc-----------cc---
Q 020854 198 VIPSDP----------LYSVYAATKAYIDQFSRSLYVEY--RKSGIDVQCQV--PLYVATKMAS-----------IK--- 249 (320)
Q Consensus 198 ~~~~~~----------~~~~Y~asKaal~~~~~~l~~el--~~~gi~v~~v~--PG~v~T~~~~-----------~~--- 249 (320)
... .+ ....|+.||++.+.+++.++.+. ....+|++.|. ||.+.++... ..
T Consensus 146 ~~~-~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~ 224 (342)
T 2hrz_A 146 GAP-LPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAV 224 (342)
T ss_dssp CSS-CCSSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEE
T ss_pred CCC-CCCCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCee
Confidence 521 11 46789999999999999888763 22346777777 8876543211 00
Q ss_pred cC-----CCCCCCHHHHHHHHHHHhCC
Q 020854 250 RS-----SFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 250 ~~-----~~~~~~~~~~a~~i~~~l~~ 271 (320)
.+ ......++++|+.++..+..
T Consensus 225 ~~~~~~~~~~~~~v~Dva~~~~~~~~~ 251 (342)
T 2hrz_A 225 LPVPESIRHWHASPRSAVGFLIHGAMI 251 (342)
T ss_dssp ECSCTTCEEEEECHHHHHHHHHHHHHS
T ss_pred ccCCCccceeeEehHHHHHHHHHHHhc
Confidence 00 01145799999999888754
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.2e-18 Score=149.54 Aligned_cols=177 Identities=12% Similarity=0.089 Sum_probs=129.2
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeE
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG 134 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 134 (320)
+++||||||+||++++++|+++|++|++++|+.+++++.. ...+..+.+|++|... +.+++ +|
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------~~~~~~~~~D~~d~~~-------~~~~~--~d 64 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL--------GATVATLVKEPLVLTE-------ADLDS--VD 64 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT--------CTTSEEEECCGGGCCH-------HHHTT--CS
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc--------CCCceEEecccccccH-------hhccc--CC
Confidence 4999999999999999999999999999999988765431 3457889999998732 44554 55
Q ss_pred EEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCC----------
Q 020854 135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL---------- 204 (320)
Q Consensus 135 ~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~---------- 204 (320)
+||||||.... . + . .++|+.++. .+++.+++.+ +++|++||.++... .+.
T Consensus 65 ~vi~~ag~~~~--~---~-~-------~~~n~~~~~----~l~~a~~~~~-~~~v~~SS~~~~~~--~~~~~~~~~~~~~ 124 (224)
T 3h2s_A 65 AVVDALSVPWG--S---G-R-------GYLHLDFAT----HLVSLLRNSD-TLAVFILGSASLAM--PGADHPMILDFPE 124 (224)
T ss_dssp EEEECCCCCTT--S---S-C-------THHHHHHHH----HHHHTCTTCC-CEEEEECCGGGSBC--TTCSSCGGGGCCG
T ss_pred EEEECCccCCC--c---c-h-------hhHHHHHHH----HHHHHHHHcC-CcEEEEecceeecc--CCCCccccccCCC
Confidence 99999998632 1 0 1 245666654 4555566666 99999999877652 222
Q ss_pred ----chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc-----------ccCCCCCCCHHHHHHHHHHHh
Q 020854 205 ----YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI-----------KRSSFFVPSTDVYARAAMRWI 269 (320)
Q Consensus 205 ----~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~-----------~~~~~~~~~~~~~a~~i~~~l 269 (320)
...|+.+|++.+.+ +. .....|++++.+.||.+.++.... ........+++++|+.++..+
T Consensus 125 ~~~~~~~y~~sK~~~e~~-~~---~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l 200 (224)
T 3h2s_A 125 SAASQPWYDGALYQYYEY-QF---LQMNANVNWIGISPSEAFPSGPATSYVAGKDTLLVGEDGQSHITTGNMALAILDQL 200 (224)
T ss_dssp GGGGSTTHHHHHHHHHHH-HH---HTTCTTSCEEEEEECSBCCCCCCCCEEEESSBCCCCTTSCCBCCHHHHHHHHHHHH
T ss_pred CCccchhhHHHHHHHHHH-HH---HHhcCCCcEEEEcCccccCCCcccCceecccccccCCCCCceEeHHHHHHHHHHHh
Confidence 56799999988854 22 223679999999999998762211 011123578999999999999
Q ss_pred CCC
Q 020854 270 GYE 272 (320)
Q Consensus 270 ~~~ 272 (320)
..+
T Consensus 201 ~~~ 203 (224)
T 3h2s_A 201 EHP 203 (224)
T ss_dssp HSC
T ss_pred cCc
Confidence 876
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.3e-19 Score=154.46 Aligned_cols=185 Identities=16% Similarity=0.174 Sum_probs=137.2
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCe
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV 133 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 133 (320)
++++||||+|+||++++++|+++|++|++++|+.++.+.. ...+.++.+|++|. +. +.+.+.+ +
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---------~~~~~~~~~Dl~d~--~~---~~~~~~~--~ 68 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE---------NEHLKVKKADVSSL--DE---VCEVCKG--A 68 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC---------CTTEEEECCCTTCH--HH---HHHHHTT--C
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc---------cCceEEEEecCCCH--HH---HHHHhcC--C
Confidence 6899999999999999999999999999999998764321 24688899999976 33 3334443 5
Q ss_pred EEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC--------CCCCc
Q 020854 134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP--------SDPLY 205 (320)
Q Consensus 134 d~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~--------~~~~~ 205 (320)
|+|||+||.... + ...+++|+.++.++++++.. .+.+++|++||..+.... +....
T Consensus 69 d~vi~~a~~~~~--------~----~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~ 132 (227)
T 3dhn_A 69 DAVISAFNPGWN--------N----PDIYDETIKVYLTIIDGVKK----AGVNRFLMVGGAGSLFIAPGLRLMDSGEVPE 132 (227)
T ss_dssp SEEEECCCC------------------CCSHHHHHHHHHHHHHHH----TTCSEEEEECCSTTSEEETTEEGGGTTCSCG
T ss_pred CEEEEeCcCCCC--------C----hhHHHHHHHHHHHHHHHHHH----hCCCEEEEeCChhhccCCCCCccccCCcchH
Confidence 699999986422 0 12567899999888888644 455799999998765421 11225
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc------c------cCCCCCCCHHHHHHHHHHHhCCCC
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI------K------RSSFFVPSTDVYARAAMRWIGYEP 273 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~------~------~~~~~~~~~~~~a~~i~~~l~~~~ 273 (320)
..|+.+|++.+.+.+.++.+ .|++++.+.||.+.++.... . ........++++|+.++..+..+.
T Consensus 133 ~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ai~~~l~~~~ 209 (227)
T 3dhn_A 133 NILPGVKALGEFYLNFLMKE---KEIDWVFFSPAADMRPGVRTGRYRLGKDDMIVDIVGNSHISVEDYAAAMIDELEHPK 209 (227)
T ss_dssp GGHHHHHHHHHHHHHTGGGC---CSSEEEEEECCSEEESCCCCCCCEEESSBCCCCTTSCCEEEHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHhhc---cCccEEEEeCCcccCCCccccceeecCCCcccCCCCCcEEeHHHHHHHHHHHHhCcc
Confidence 78999999999988887763 58999999999987765331 0 011224679999999999998763
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.2e-19 Score=162.47 Aligned_cols=198 Identities=19% Similarity=0.225 Sum_probs=130.6
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeC-CHHHHHHHHHHHHhhc-CCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKY-AKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r-~~~~~~~~~~~l~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
||++|||||+|+||++++++|+++|++|++++| +.+..++. +.+.+.. ...++.++.+|++|. +.++++ +.+
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~--~~~~~~---~~~ 74 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDV-SFLTNLPGASEKLHFFNADLSNP--DSFAAA---IEG 74 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCC-HHHHTSTTHHHHEEECCCCTTCG--GGGHHH---HTT
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHH-HHHHhhhccCCceEEEecCCCCH--HHHHHH---HcC
Confidence 689999999999999999999999999999998 65321111 1111100 012577888999986 333333 333
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCC--------
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD-------- 202 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~-------- 202 (320)
+|+|||+|+... .. ..+..++++++|+.|+.++++++.+.. +.++||++||.++....+.
T Consensus 75 --~d~vih~A~~~~-----~~--~~~~~~~~~~~nv~gt~~l~~aa~~~~---~~~~iV~~SS~~~~~~~~~~~~~~~e~ 142 (322)
T 2p4h_X 75 --CVGIFHTASPID-----FA--VSEPEEIVTKRTVDGALGILKACVNSK---TVKRFIYTSSGSAVSFNGKDKDVLDES 142 (322)
T ss_dssp --CSEEEECCCCC---------------CHHHHHHHHHHHHHHHHHTTCS---SCCEEEEEEEGGGTSCSSSCCSEECTT
T ss_pred --CCEEEEcCCccc-----CC--CCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEeccHHHcccCCCCCeecCCc
Confidence 569999996421 11 111135688999999999999987641 4579999999885431110
Q ss_pred ------------CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcccc---------------CCC--
Q 020854 203 ------------PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKR---------------SSF-- 253 (320)
Q Consensus 203 ------------~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~---------------~~~-- 253 (320)
|....|+.||.+.+.+++.++.+ .|++++++.||.+.+|+..... ...
T Consensus 143 ~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~ 219 (322)
T 2p4h_X 143 DWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGV 219 (322)
T ss_dssp CCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCE
T ss_pred cccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcC
Confidence 01126999998777666554432 5899999999999998643100 000
Q ss_pred ---CCCCHHHHHHHHHHHhCC
Q 020854 254 ---FVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 254 ---~~~~~~~~a~~i~~~l~~ 271 (320)
....++++|+.++..+..
T Consensus 220 ~~~~~i~v~Dva~a~~~~~~~ 240 (322)
T 2p4h_X 220 TRFHMVHVDDVARAHIYLLEN 240 (322)
T ss_dssp EEEEEEEHHHHHHHHHHHHHS
T ss_pred CCcCEEEHHHHHHHHHHHhhC
Confidence 146889999998888754
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-18 Score=160.92 Aligned_cols=205 Identities=18% Similarity=0.096 Sum_probs=135.6
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHH-HHHHHHHhhc--CCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK-DVSDSIQAKY--AKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~-~~~~~l~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
+|+++||||+|+||++++++|+++|++|++++|+.++.. +..+++.+.. .+..+..+.+|++|. +.++++.+..
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~--~~~~~~~~~~- 77 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDT--SNLTRILREV- 77 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCH--HHHHHHHHHH-
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCH--HHHHHHHHhc-
Confidence 478999999999999999999999999999999865421 1112221110 124578889999975 5555554443
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC---------
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP--------- 200 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~--------- 200 (320)
++|+||||||.... +.+.++++..+++|+.|+.++++++.+...+ +.++||++||.+.+...
T Consensus 78 --~~d~vih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~SS~~v~g~~~~~~~~E~~ 148 (372)
T 1db3_A 78 --QPDEVYNLGAMSHV------AVSFESPEYTADVDAMGTLRLLEAIRFLGLE-KKTRFYQASTSELYGLVQEIPQKETT 148 (372)
T ss_dssp --CCSEEEECCCCCTT------TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGGTTCCSSSBCTTS
T ss_pred --CCCEEEECCcccCc------cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCChhhhCCCCCCCCCccC
Confidence 46799999997542 1233446778999999999999999876432 34899999998765421
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc-----------------cc---------cCCCC
Q 020854 201 SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS-----------------IK---------RSSFF 254 (320)
Q Consensus 201 ~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~-----------------~~---------~~~~~ 254 (320)
+......|+.||++.+.+++.++.++ |+.+..+.|+.+..|-.. .. .....
T Consensus 149 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~ 225 (372)
T 1db3_A 149 PFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRD 225 (372)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEEC
T ss_pred CCCCCChHHHHHHHHHHHHHHHHHHh---CCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceee
Confidence 11235789999999999999999875 566665555433222100 00 00112
Q ss_pred CCCHHHHHHHHHHHhCCC
Q 020854 255 VPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 255 ~~~~~~~a~~i~~~l~~~ 272 (320)
....+++|+.++..+..+
T Consensus 226 ~i~v~Dva~a~~~~~~~~ 243 (372)
T 1db3_A 226 WGHAKDYVKMQWMMLQQE 243 (372)
T ss_dssp CEEHHHHHHHHHHTTSSS
T ss_pred eeEHHHHHHHHHHHHhcC
Confidence 567889999998887654
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=4.2e-18 Score=143.86 Aligned_cols=179 Identities=15% Similarity=0.171 Sum_probs=131.8
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
+++++||||||+||++++++|+++|++|++++|+.++.+.. ....+..+.+|++|. +. +.+.+.+
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~--------~~~~~~~~~~D~~~~--~~---~~~~~~~-- 67 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE--------GPRPAHVVVGDVLQA--AD---VDKTVAG-- 67 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS--------SCCCSEEEESCTTSH--HH---HHHHHTT--
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc--------cCCceEEEEecCCCH--HH---HHHHHcC--
Confidence 47899999999999999999999999999999998764321 034578889999875 33 3344444
Q ss_pred eEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCC----Cchhh
Q 020854 133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP----LYSVY 208 (320)
Q Consensus 133 id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~----~~~~Y 208 (320)
+|+||||||.... .+. .++|+.++..+++++.. .+.++||++||..... ..+ ....|
T Consensus 68 ~d~vi~~a~~~~~-----~~~--------~~~n~~~~~~~~~~~~~----~~~~~~v~~Ss~~~~~--~~~~~~~~~~~y 128 (206)
T 1hdo_A 68 QDAVIVLLGTRND-----LSP--------TTVMSEGARNIVAAMKA----HGVDKVVACTSAFLLW--DPTKVPPRLQAV 128 (206)
T ss_dssp CSEEEECCCCTTC-----CSC--------CCHHHHHHHHHHHHHHH----HTCCEEEEECCGGGTS--CTTCSCGGGHHH
T ss_pred CCEEEECccCCCC-----CCc--------cchHHHHHHHHHHHHHH----hCCCeEEEEeeeeecc--CcccccccchhH
Confidence 5699999997542 111 13788888888877654 3567999999987755 222 56789
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccce-ecCCCcc------ccCCCCCCCHHHHHHHHHHHhCCC
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYV-ATKMASI------KRSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v-~T~~~~~------~~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
+.+|++++.+.+ ..|++++++.||.+ .++.... ..+.....+++++|+.++..+..+
T Consensus 129 ~~~K~~~e~~~~-------~~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~ 192 (206)
T 1hdo_A 129 TDDHIRMHKVLR-------ESGLKYVAVMPPHIGDQPLTGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTD 192 (206)
T ss_dssp HHHHHHHHHHHH-------HTCSEEEEECCSEEECCCCCSCCEEESSSCSSCSEEEHHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHHH-------hCCCCEEEEeCCcccCCCCCcceEecccCCCCCCccCHHHHHHHHHHHhcCc
Confidence 999999998874 26899999999998 4443221 111124578999999999988765
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=2.8e-19 Score=161.14 Aligned_cols=188 Identities=15% Similarity=0.049 Sum_probs=141.0
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCe
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV 133 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 133 (320)
++|+||||||+||++++++|+++|++|++++|+.+...+.. ...+..+.+|++|. + +.+.+..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~Dl~d~--~----~~~~~~~--- 63 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV--------NPSAELHVRDLKDY--S----WGAGIKG--- 63 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS--------CTTSEEECCCTTST--T----TTTTCCC---
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc--------CCCceEEECccccH--H----HHhhcCC---
Confidence 46999999999999999999999999999999865432211 34577888999986 2 2222332
Q ss_pred EEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC---------CCCC
Q 020854 134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------SDPL 204 (320)
Q Consensus 134 d~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~---------~~~~ 204 (320)
|+|||+||.... +.+.++++..+++|+.++.++++++.. .+.++||++||.+.+..+ +...
T Consensus 64 d~vih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p 133 (312)
T 3ko8_A 64 DVVFHFAANPEV------RLSTTEPIVHFNENVVATFNVLEWARQ----TGVRTVVFASSSTVYGDADVIPTPEEEPYKP 133 (312)
T ss_dssp SEEEECCSSCSS------SGGGSCHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCSCSSSSBCTTSCCCC
T ss_pred CEEEECCCCCCc------hhhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeCcHHHhCCCCCCCCCCCCCCCC
Confidence 699999996432 233445678899999999999998744 346799999998765421 1223
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc------------c-c---------CCCCCCCHHHHH
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI------------K-R---------SSFFVPSTDVYA 262 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~------------~-~---------~~~~~~~~~~~a 262 (320)
...|+.||.+.+.+++.++.++ |++++.+.||.+.+|.... . . ........+++|
T Consensus 134 ~~~Y~~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva 210 (312)
T 3ko8_A 134 ISVYGAAKAAGEVMCATYARLF---GVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAV 210 (312)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHH
Confidence 5789999999999999999886 8999999999999886331 0 0 001234589999
Q ss_pred HHHHHHhCC
Q 020854 263 RAAMRWIGY 271 (320)
Q Consensus 263 ~~i~~~l~~ 271 (320)
+.++..+..
T Consensus 211 ~a~~~~~~~ 219 (312)
T 3ko8_A 211 EATLAAWKK 219 (312)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999988765
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.5e-18 Score=163.60 Aligned_cols=195 Identities=16% Similarity=0.100 Sum_probs=139.8
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHH---HHHHHHHHHHhhc-------CCceEEEEEEeCCCCcHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD---KLKDVSDSIQAKY-------AKTQIKSVVVDFSGDLDEG 120 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~---~~~~~~~~l~~~~-------~~~~~~~~~~D~~~~~~~~ 120 (320)
..+++||||||+|+||++++++|++.|++|++++|+.+ ..+.+.+.+...+ ...++.++.+|++|. +.
T Consensus 67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~--~~ 144 (427)
T 4f6c_A 67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECM--DD 144 (427)
T ss_dssp CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC-----CC
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCc--cc
Confidence 45789999999999999999999999999999999876 3444444443321 135688999999974 11
Q ss_pred HHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC
Q 020854 121 VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP 200 (320)
Q Consensus 121 ~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~ 200 (320)
+. .++ ++|+||||||.... .+.++..+++|+.|+.++++++.+ +.++||++||... ...
T Consensus 145 l~----~~~--~~d~Vih~A~~~~~---------~~~~~~~~~~Nv~g~~~l~~aa~~-----~~~~~v~~SS~~~-G~~ 203 (427)
T 4f6c_A 145 VV----LPE--NMDTIIHAGARTDH---------FGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISV-GTY 203 (427)
T ss_dssp CC----CSS--CCSEEEECCCCC----------------CHHHHHHHHHHHHHHHHHH-----TTCEEEEEEEGGG-GSE
T ss_pred CC----CcC--CCCEEEECCcccCC---------CCCHHHHHHHHHHHHHHHHHHHHh-----cCCcEEEECchHh-CCC
Confidence 12 223 56799999997531 234678889999999999999876 4579999999887 100
Q ss_pred -----------------CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc--------------
Q 020854 201 -----------------SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK-------------- 249 (320)
Q Consensus 201 -----------------~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~-------------- 249 (320)
+......|+.||.+.+.+++.++. .|++++++.||.|-++.....
T Consensus 204 ~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~ 279 (427)
T 4f6c_A 204 FDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVM 279 (427)
T ss_dssp ECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHH
T ss_pred ccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHH
Confidence 022567899999999999988653 689999999999977653210
Q ss_pred --------------cCCCCCCCHHHHHHHHHHHhCCC
Q 020854 250 --------------RSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 250 --------------~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
.....+...+++|+.++..+..+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~ 316 (427)
T 4f6c_A 280 NDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVN 316 (427)
T ss_dssp HHHHHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSC
T ss_pred HHHHhcCCCCCccccceEEEeeHHHHHHHHHHHHcCC
Confidence 11122567899999999988654
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=2.1e-18 Score=157.98 Aligned_cols=202 Identities=12% Similarity=0.013 Sum_probs=148.3
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCC---ceEEEEEEeCCCCcHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAK---TQIKSVVVDFSGDLDEGVERIKE 126 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~ 126 (320)
.+++++|+||||||+||++++++|+++|++|++++|+........+.+....+. ..+.++.+|++|. +. +.+
T Consensus 22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~--~~---~~~ 96 (351)
T 3ruf_A 22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDL--TT---CEQ 96 (351)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCH--HH---HHH
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCH--HH---HHH
Confidence 456899999999999999999999999999999999765444444444332111 4688999999876 33 333
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCC----
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD---- 202 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~---- 202 (320)
.+. ++|+|||+||.... ..+.++....+++|+.++.++++++.. .+.+++|++||.+.+...+.
T Consensus 97 ~~~--~~d~Vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~v~~SS~~vyg~~~~~~~~ 164 (351)
T 3ruf_A 97 VMK--GVDHVLHQAALGSV------PRSIVDPITTNATNITGFLNILHAAKN----AQVQSFTYAASSSTYGDHPALPKV 164 (351)
T ss_dssp HTT--TCSEEEECCCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGTTCCCSSBC
T ss_pred Hhc--CCCEEEECCccCCc------chhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEecHHhcCCCCCCCCc
Confidence 344 46699999997532 123344677899999999999998754 34579999999877642111
Q ss_pred -----CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc------------------c--------cC
Q 020854 203 -----PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI------------------K--------RS 251 (320)
Q Consensus 203 -----~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~------------------~--------~~ 251 (320)
.....|+.||.+.+.+++.++.+. |++++.+.||.+-.+-... . ..
T Consensus 165 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~ 241 (351)
T 3ruf_A 165 EENIGNPLSPYAVTKYVNEIYAQVYARTY---GFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGET 241 (351)
T ss_dssp TTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCC
T ss_pred cCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCe
Confidence 124689999999999999998875 8999999999987764210 0 01
Q ss_pred CCCCCCHHHHHHHHHHHhCC
Q 020854 252 SFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 252 ~~~~~~~~~~a~~i~~~l~~ 271 (320)
...+...+++|+.++..+..
T Consensus 242 ~~~~i~v~Dva~a~~~~~~~ 261 (351)
T 3ruf_A 242 SRDFCYIDNVIQMNILSALA 261 (351)
T ss_dssp EECCEEHHHHHHHHHHHHTC
T ss_pred EEeeEEHHHHHHHHHHHHhh
Confidence 11245789999999988765
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=2.7e-18 Score=157.03 Aligned_cols=159 Identities=18% Similarity=0.126 Sum_probs=120.9
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA 127 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 127 (320)
..+.++|+||||||+|+||.+++++|+++|++|++++|+.++ ..+..+.+|++|. +.++ +.
T Consensus 14 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~--------------~~~~~~~~Dl~d~--~~~~---~~ 74 (347)
T 4id9_A 14 LVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG--------------TGGEEVVGSLEDG--QALS---DA 74 (347)
T ss_dssp -------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS--------------SCCSEEESCTTCH--HHHH---HH
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC--------------CCccEEecCcCCH--HHHH---HH
Confidence 445679999999999999999999999999999999998754 3466788999876 3333 33
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccccc--------
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI-------- 199 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~-------- 199 (320)
+. ++|+|||+||.... +.+.++..+++|+.|+.++++++.. .+.++||++||...+..
T Consensus 75 ~~--~~d~vih~A~~~~~--------~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~V~~SS~~vyg~~~~~~~~~ 140 (347)
T 4id9_A 75 IM--GVSAVLHLGAFMSW--------APADRDRMFAVNVEGTRRLLDAASA----AGVRRFVFASSGEVYPENRPEFLPV 140 (347)
T ss_dssp HT--TCSEEEECCCCCCS--------SGGGHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGTTTTSCSSSSB
T ss_pred Hh--CCCEEEECCcccCc--------chhhHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEECCHHHhCCCCCCCCCc
Confidence 44 46699999997542 2233488899999999999998754 45679999999765431
Q ss_pred ---CCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEecccee
Q 020854 200 ---PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVA 242 (320)
Q Consensus 200 ---~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~ 242 (320)
.+......|+.||.+.+.+++.++.+ .|++++.+.|+.+.
T Consensus 141 ~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~ 183 (347)
T 4id9_A 141 TEDHPLCPNSPYGLTKLLGEELVRFHQRS---GAMETVILRFSHTQ 183 (347)
T ss_dssp CTTSCCCCCSHHHHHHHHHHHHHHHHHHH---SSSEEEEEEECEEE
T ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHh---cCCceEEEccceEe
Confidence 01234578999999999999998877 48999999999887
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.79 E-value=5.4e-19 Score=161.66 Aligned_cols=203 Identities=15% Similarity=0.044 Sum_probs=139.4
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G--~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 127 (320)
..++++|+||||||+||.+++++|+++| ++|+..+|+..... .+.+........+.++.+|++|. +.++++.+.
T Consensus 21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~--~~~~~~~~~ 96 (346)
T 4egb_A 21 QSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN--LNNVKSIQDHPNYYFVKGEIQNG--ELLEHVIKE 96 (346)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC--GGGGTTTTTCTTEEEEECCTTCH--HHHHHHHHH
T ss_pred ccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc--hhhhhhhccCCCeEEEEcCCCCH--HHHHHHHhh
Confidence 3568999999999999999999999999 67887777542110 11111222235788999999986 455554443
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCC------
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS------ 201 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~------ 201 (320)
. ++|+|||+||.... +.+.++.+..+++|+.|+.++++++.. .+.+++|++||.+.+...+
T Consensus 97 ~---~~d~Vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~v~~SS~~vy~~~~~~~~~~ 163 (346)
T 4egb_A 97 R---DVQVIVNFAAESHV------DRSIENPIPFYDTNVIGTVTLLELVKK----YPHIKLVQVSTDEVYGSLGKTGRFT 163 (346)
T ss_dssp H---TCCEEEECCCCC---------------CHHHHHHTHHHHHHHHHHHH----STTSEEEEEEEGGGGCCCCSSCCBC
T ss_pred c---CCCEEEECCcccch------hhhhhCHHHHHHHHHHHHHHHHHHHHh----cCCCEEEEeCchHHhCCCCcCCCcC
Confidence 2 46799999997643 123455678899999999999998754 3567899999986654210
Q ss_pred ----CCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc-------------cc---------CCCCC
Q 020854 202 ----DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI-------------KR---------SSFFV 255 (320)
Q Consensus 202 ----~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~-------------~~---------~~~~~ 255 (320)
......|+.||.+.+.+++.++.+. |++++.+.||.+-.+.... .. .....
T Consensus 164 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (346)
T 4egb_A 164 EETPLAPNSPYSSSKASADMIALAYYKTY---QLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDW 240 (346)
T ss_dssp TTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECE
T ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEee
Confidence 1124689999999999999998874 8999999999998875320 00 00113
Q ss_pred CCHHHHHHHHHHHhCCC
Q 020854 256 PSTDVYARAAMRWIGYE 272 (320)
Q Consensus 256 ~~~~~~a~~i~~~l~~~ 272 (320)
...+++|+.++..+..+
T Consensus 241 i~v~Dva~a~~~~~~~~ 257 (346)
T 4egb_A 241 LHVTDHCSAIDVVLHKG 257 (346)
T ss_dssp EEHHHHHHHHHHHHHHC
T ss_pred EEHHHHHHHHHHHHhcC
Confidence 45889999988887643
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.1e-18 Score=157.33 Aligned_cols=186 Identities=19% Similarity=0.200 Sum_probs=135.2
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCe
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV 133 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 133 (320)
.+++||||+|+||++++++|+++|++|++++|+.++.++. . ...+..+.+|++|. +. +.+.+.+ +
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~----~~~~~~~~~Dl~d~--~~---~~~~~~~--~ 78 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL----A----YLEPECRVAEMLDH--AG---LERALRG--L 78 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGG----G----GGCCEEEECCTTCH--HH---HHHHTTT--C
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhh----c----cCCeEEEEecCCCH--HH---HHHHHcC--C
Confidence 4799999999999999999999999999999987654321 1 22577889999875 33 3333443 5
Q ss_pred EEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCC---------
Q 020854 134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL--------- 204 (320)
Q Consensus 134 d~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~--------- 204 (320)
|+|||+||... .+.++.++.+++|+.++.++++++.+. +.++||++||.+.+. +.+.
T Consensus 79 d~vih~a~~~~--------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~v~~SS~~~~~--~~~~~~~~~E~~~ 144 (342)
T 2x4g_A 79 DGVIFSAGYYP--------SRPRRWQEEVASALGQTNPFYAACLQA----RVPRILYVGSAYAMP--RHPQGLPGHEGLF 144 (342)
T ss_dssp SEEEEC--------------------CHHHHHHHHHHHHHHHHHHH----TCSCEEEECCGGGSC--CCTTSSCBCTTCC
T ss_pred CEEEECCccCc--------CCCCCHHHHHHHHHHHHHHHHHHHHHc----CCCeEEEECCHHhhC--cCCCCCCCCCCCC
Confidence 69999999643 123456778899999999999998764 457899999988765 2222
Q ss_pred -------chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCC-c------------ccc-----CCCCCCCHH
Q 020854 205 -------YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMA-S------------IKR-----SSFFVPSTD 259 (320)
Q Consensus 205 -------~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~-~------------~~~-----~~~~~~~~~ 259 (320)
...|+.||.+.+.+++.++. . |++++++.||.+.++.. . ... .......++
T Consensus 145 ~~p~~~~~~~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 220 (342)
T 2x4g_A 145 YDSLPSGKSSYVLCKWALDEQAREQAR---N-GLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHYVAGQRNVIDAA 220 (342)
T ss_dssp CSSCCTTSCHHHHHHHHHHHHHHHHHH---T-TCCEEEEEECEEECSCCSSCSTTHHHHHHHTTCCCEEECCEEEEEEHH
T ss_pred CCccccccChHHHHHHHHHHHHHHHhh---c-CCcEEEEeCCceECCCCccccHHHHHHHHHcCCCccccCCCcceeeHH
Confidence 67899999999999999876 3 89999999999988764 1 000 011145899
Q ss_pred HHHHHHHHHhCCC
Q 020854 260 VYARAAMRWIGYE 272 (320)
Q Consensus 260 ~~a~~i~~~l~~~ 272 (320)
++|+.++..+..+
T Consensus 221 Dva~~~~~~~~~~ 233 (342)
T 2x4g_A 221 EAGRGLLMALERG 233 (342)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhCC
Confidence 9999999887543
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=2.2e-18 Score=157.09 Aligned_cols=170 Identities=16% Similarity=0.132 Sum_probs=121.2
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeE
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG 134 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 134 (320)
+++||||+|+||++++++|+++|++|++++|......+..+.+.+.. +..+..+.+|++|. +.++++.+.. ++|
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~--~~~~~~~~~~---~~D 75 (338)
T 1udb_A 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG-GKHPTFVEGDIRNE--ALMTEILHDH---AID 75 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH-TSCCEEEECCTTCH--HHHHHHHHHT---TCS
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhc-CCcceEEEccCCCH--HHHHHHhhcc---CCC
Confidence 68999999999999999999999999999874322111122222211 33567889999975 4555554432 467
Q ss_pred EEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccccc----------CCCCC
Q 020854 135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI----------PSDPL 204 (320)
Q Consensus 135 ~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~----------~~~~~ 204 (320)
+||||||.... .. ..+..++.+++|+.|+.++++++. +.+.++||++||.+.+.. +..+.
T Consensus 76 ~vih~A~~~~~--~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~ 145 (338)
T 1udb_A 76 TVIHFAGLKAV--GE----SVQKPLEYYDNNVNGTLRLISAMR----AANVKNFIFSSSATVYGDNPKIPYVESFPTGTP 145 (338)
T ss_dssp EEEECCSCCCH--HH----HHHCHHHHHHHHHHHHHHHHHHHH----HHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCC
T ss_pred EEEECCccCcc--cc----chhcHHHHHHHHHHHHHHHHHHHH----hcCCCeEEEEccHHHhCCCCCCCcCcccCCCCC
Confidence 99999997532 11 223346788999999999988753 345679999999876531 11133
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEecccee
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVA 242 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~ 242 (320)
...|+.||++.+.+++.++.+. .|+++..+.|+.+-
T Consensus 146 ~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~ 181 (338)
T 1udb_A 146 QSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPV 181 (338)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEE
T ss_pred CChHHHHHHHHHHHHHHHHHhc--CCCceEEEeeceec
Confidence 6789999999999999998873 47899888876553
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.2e-18 Score=160.46 Aligned_cols=199 Identities=12% Similarity=0.077 Sum_probs=137.1
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHH--cCCeEEEEeCCHHHHHHHH------HHHHhhcCCceEEEEEEeCCCCcHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAK--TGLNLVLVGRNPDKLKDVS------DSIQAKYAKTQIKSVVVDFSGDLDEG 120 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~--~G~~Vil~~r~~~~~~~~~------~~l~~~~~~~~~~~~~~D~~~~~~~~ 120 (320)
+++++++|+||||+|+||++++++|++ .|++|++++|+........ .... ...+..+.++.+|++|. +.
T Consensus 6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~--~~ 82 (362)
T 3sxp_A 6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFK-NLIGFKGEVIAADINNP--LD 82 (362)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGG-GGTTCCSEEEECCTTCH--HH
T ss_pred hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhh-hccccCceEEECCCCCH--HH
Confidence 456799999999999999999999999 9999999999764211000 0000 11134578899999986 44
Q ss_pred HHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC
Q 020854 121 VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP 200 (320)
Q Consensus 121 ~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~ 200 (320)
++++ ... ++|+||||||.... +.++++..+++|+.|+.++++++.. . +++||++||.+.+..+
T Consensus 83 ~~~~--~~~--~~D~vih~A~~~~~--------~~~~~~~~~~~Nv~gt~~ll~aa~~----~-~~~~V~~SS~~vyg~~ 145 (362)
T 3sxp_A 83 LRRL--EKL--HFDYLFHQAAVSDT--------TMLNQELVMKTNYQAFLNLLEIARS----K-KAKVIYASSAGVYGNT 145 (362)
T ss_dssp HHHH--TTS--CCSEEEECCCCCGG--------GCCCHHHHHHHHTHHHHHHHHHHHH----T-TCEEEEEEEGGGGCSC
T ss_pred HHHh--hcc--CCCEEEECCccCCc--------cccCHHHHHHHHHHHHHHHHHHHHH----c-CCcEEEeCcHHHhCCC
Confidence 4444 123 57799999996431 2234678899999999999999843 2 3559999996654421
Q ss_pred CC--------CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc------------------cc-----
Q 020854 201 SD--------PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS------------------IK----- 249 (320)
Q Consensus 201 ~~--------~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~------------------~~----- 249 (320)
.. .....|+.||++.+.+++.++.+ +++..+.|+.+-.|-.. ..
T Consensus 146 ~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (362)
T 3sxp_A 146 KAPNVVGKNESPENVYGFSKLCMDEFVLSHSND-----NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLF 220 (362)
T ss_dssp CSSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-----SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECS
T ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHhcc-----CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEE
Confidence 11 12356999999999999988766 66677777666544321 00
Q ss_pred ---cCCCCCCCHHHHHHHHHHHhCCC
Q 020854 250 ---RSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 250 ---~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
........++++|+.++..+..+
T Consensus 221 ~~g~~~~~~i~v~Dva~ai~~~~~~~ 246 (362)
T 3sxp_A 221 EFGEQLRDFVYIEDVIQANVKAMKAQ 246 (362)
T ss_dssp GGGCCEEECEEHHHHHHHHHHHTTCS
T ss_pred CCCCeEEccEEHHHHHHHHHHHHhcC
Confidence 00112456899999999998765
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=4.3e-19 Score=160.04 Aligned_cols=165 Identities=20% Similarity=0.150 Sum_probs=122.8
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeE
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG 134 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 134 (320)
+++||||+|+||++++++|+++|++|++++|+.....+ .+ ...+..+.+|++|. +.++++.+.. ++|
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---~~-----~~~~~~~~~Dl~~~--~~~~~~~~~~---~~d 68 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE---NV-----PKGVPFFRVDLRDK--EGVERAFREF---RPT 68 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG---GS-----CTTCCEECCCTTCH--HHHHHHHHHH---CCS
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh---hc-----ccCeEEEECCCCCH--HHHHHHHHhc---CCC
Confidence 59999999999999999999999999999985432110 01 12356778999875 4454444432 356
Q ss_pred EEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCc-ccccc-----C-----CCC
Q 020854 135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSG-AAIVI-----P-----SDP 203 (320)
Q Consensus 135 ~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~-~~~~~-----~-----~~~ 203 (320)
+|||+||.... ..+.++++..+++|+.|+.++++++.. .+.++||++||. +.+.. + +..
T Consensus 69 ~vi~~a~~~~~------~~~~~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~ 138 (311)
T 2p5y_A 69 HVSHQAAQASV------KVSVEDPVLDFEVNLLGGLNLLEACRQ----YGVEKLVFASTGGAIYGEVPEGERAEETWPPR 138 (311)
T ss_dssp EEEECCSCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCC
T ss_pred EEEECccccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCChhhcCCCCCCCCcCCCCCCC
Confidence 99999996532 123455678899999999999998753 445799999998 32210 0 012
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCC
Q 020854 204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKM 245 (320)
Q Consensus 204 ~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~ 245 (320)
....|+.||++.+.+++.++.++ |++++++.||.+.+|.
T Consensus 139 ~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~Gp~ 177 (311)
T 2p5y_A 139 PKSPYAASKAAFEHYLSVYGQSY---GLKWVSLRYGNVYGPR 177 (311)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTT
T ss_pred CCChHHHHHHHHHHHHHHHHHHc---CCCEEEEeeccccCcC
Confidence 35689999999999999998875 7999999999998875
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=3.2e-18 Score=156.54 Aligned_cols=192 Identities=15% Similarity=0.076 Sum_probs=139.6
Q ss_pred CEEEEECCCCcHHHHHHHHHHHc--CCeEEEEeCCHHH-HHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKT--GLNLVLVGRNPDK-LKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~--G~~Vil~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
++++||||+|+||++++++|+++ |++|++++|+... ..+..+++ ....+.++.+|++|. +.++ +.+.+
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~--~~~~---~~~~~ 75 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI----LGDRVELVVGDIADA--ELVD---KLAAK 75 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG----CSSSEEEEECCTTCH--HHHH---HHHTT
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhh----ccCCeEEEECCCCCH--HHHH---HHhhc
Confidence 68999999999999999999999 8999999996421 01111111 134688899999976 3333 33444
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC----------
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------- 200 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~---------- 200 (320)
. |+|||+||.... +.+.++++..+++|+.|+.++++++.+. + ++||++||.+.+...
T Consensus 76 ~--d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~-~~~v~~SS~~vyg~~~~~~~~~~~~ 142 (348)
T 1oc2_A 76 A--DAIVHYAAESHN------DNSLNDPSPFIHTNFIGTYTLLEAARKY----D-IRFHHVSTDEVYGDLPLREDLPGHG 142 (348)
T ss_dssp C--SEEEECCSCCCH------HHHHHCCHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGGCCBCCGGGSTTTT
T ss_pred C--CEEEECCcccCc------cchhhCHHHHHHHHHHHHHHHHHHHHHh----C-CeEEEecccceeCCCcccccccccc
Confidence 3 599999997532 1233445788999999999999999874 2 499999997644211
Q ss_pred -----------CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc--------------cc-----
Q 020854 201 -----------SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI--------------KR----- 250 (320)
Q Consensus 201 -----------~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~--------------~~----- 250 (320)
+.+....|+.||++.+.+++.++.++ |++++++.||.+.++.... ..
T Consensus 143 ~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (348)
T 1oc2_A 143 EGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYG 219 (348)
T ss_dssp CSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEET
T ss_pred cccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEec
Confidence 12345789999999999999999876 7999999999998876420 00
Q ss_pred ---CCCCCCCHHHHHHHHHHHhC
Q 020854 251 ---SSFFVPSTDVYARAAMRWIG 270 (320)
Q Consensus 251 ---~~~~~~~~~~~a~~i~~~l~ 270 (320)
.......++++|+.++..+.
T Consensus 220 ~~~~~~~~i~v~Dva~~~~~~~~ 242 (348)
T 1oc2_A 220 EGKNVRDWIHTNDHSTGVWAILT 242 (348)
T ss_dssp TSCCEEECEEHHHHHHHHHHHHH
T ss_pred CCCceEeeEEHHHHHHHHHHHhh
Confidence 00124578899998888775
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.78 E-value=7.2e-18 Score=144.11 Aligned_cols=178 Identities=16% Similarity=0.138 Sum_probs=123.1
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeE
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG 134 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 134 (320)
+++||||||+||++++++|+++|++|++++|+.+++++.. ..+..+.+|++|... +.+.+ +|
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---------~~~~~~~~D~~d~~~-------~~~~~--~d 63 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH---------KDINILQKDIFDLTL-------SDLSD--QN 63 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC---------SSSEEEECCGGGCCH-------HHHTT--CS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc---------CCCeEEeccccChhh-------hhhcC--CC
Confidence 5999999999999999999999999999999987755431 357788999998732 44454 55
Q ss_pred EEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCC----------CC
Q 020854 135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD----------PL 204 (320)
Q Consensus 135 ~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~----------~~ 204 (320)
+||||||.... . ..+|+.++ +.+++.+++.+.+++|++||..+....+. ..
T Consensus 64 ~vi~~ag~~~~---~------------~~~~~~~~----~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~ 124 (221)
T 3ew7_A 64 VVVDAYGISPD---E------------AEKHVTSL----DHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLRE 124 (221)
T ss_dssp EEEECCCSSTT---T------------TTSHHHHH----HHHHHHHCSCCSSEEEEECCCC-------------------
T ss_pred EEEECCcCCcc---c------------cchHHHHH----HHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCC
Confidence 99999997432 0 12355554 44555566666789999999887552111 12
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc------------ccCCCCCCCHHHHHHHHHHHhCCC
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI------------KRSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~------------~~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
...|+.+|.+.+.+ +.+.. ...|++++.+.||.+.++-... ........+++++|+.++..+..+
T Consensus 125 ~~~y~~~k~~~e~~-~~~~~--~~~gi~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~ 201 (221)
T 3ew7_A 125 APYYPTARAQAKQL-EHLKS--HQAEFSWTYISPSAMFEPGERTGDYQIGKDHLLFGSDGNSFISMEDYAIAVLDEIERP 201 (221)
T ss_dssp CCCSCCHHHHHHHH-HHHHT--TTTTSCEEEEECSSCCCCC---------------------CCCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHH-HHHHh--hccCccEEEEeCcceecCCCccCceEeccccceecCCCCceEeHHHHHHHHHHHHhCc
Confidence 35599999999886 33332 1578999999999998762110 001123678999999999999776
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=1.8e-19 Score=153.54 Aligned_cols=178 Identities=12% Similarity=0.053 Sum_probs=131.8
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
.+++++||||+|+||++++++|+++|+ +|++++|+.++ . ...+..+.+|++|. + .+.+.+
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~--~~~~~~~~~D~~~~--~---~~~~~~- 65 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------E--HPRLDNPVGPLAEL--L---PQLDGS- 65 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------C--CTTEECCBSCHHHH--G---GGCCSC-
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------c--CCCceEEeccccCH--H---HHHHhh-
Confidence 468999999999999999999999998 99999998764 0 23466677777653 1 121112
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhH
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA 209 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~ 209 (320)
+|+||||||.... +.+.+++.+++|+.++.++++++.+ .+.++||++||..... +....|+
T Consensus 66 ---~d~vi~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~----~~~~~y~ 126 (215)
T 2a35_A 66 ---IDTAFCCLGTTIK--------EAGSEEAFRAVDFDLPLAVGKRALE----MGARHYLVVSALGADA----KSSIFYN 126 (215)
T ss_dssp ---CSEEEECCCCCHH--------HHSSHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCT----TCSSHHH
T ss_pred ---hcEEEECeeeccc--------cCCCHHHHHHhhHHHHHHHHHHHHH----cCCCEEEEECCcccCC----CCccHHH
Confidence 6699999996532 1234677889999999999998754 4567999999988765 2345899
Q ss_pred HHHHHHHHHHHHHHHHHccCCce-EEEEeccceecCCCcc----c-cCC--------CCCCCHHHHHHHHHHHhCCCC
Q 020854 210 ATKAYIDQFSRSLYVEYRKSGID-VQCQVPLYVATKMASI----K-RSS--------FFVPSTDVYARAAMRWIGYEP 273 (320)
Q Consensus 210 asKaal~~~~~~l~~el~~~gi~-v~~v~PG~v~T~~~~~----~-~~~--------~~~~~~~~~a~~i~~~l~~~~ 273 (320)
.+|++++.+.+. .|++ ++.+.||.+.++.... . ... .....++++|+.++..+..+.
T Consensus 127 ~sK~~~e~~~~~-------~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~ 197 (215)
T 2a35_A 127 RVKGELEQALQE-------QGWPQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEACDLARALWRLALEEG 197 (215)
T ss_dssp HHHHHHHHHHTT-------SCCSEEEEEECCSEESTTSCEEGGGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHH-------cCCCeEEEEeCceeeCCCCcchHHHHHHHhhhhccCCCcCcEeHHHHHHHHHHHHhcCC
Confidence 999999988764 3898 9999999999875431 0 000 012456888888888887653
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=3.8e-18 Score=157.87 Aligned_cols=203 Identities=16% Similarity=0.062 Sum_probs=140.3
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHH-----HHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK-----LKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
|+++||||+|+||++++++|+++|++|++++|+.+. ++...++.... ....+..+.+|++|. +.++++.+..
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~Dl~d~--~~~~~~~~~~ 101 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH-IEGNMKLHYGDLTDS--TCLVKIINEV 101 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCH--HHHHHHHHHH
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccc-cCCCceEEEccCCCH--HHHHHHHHhc
Confidence 689999999999999999999999999999998543 22211111100 134578889999975 4455544433
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC--------
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP-------- 200 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~-------- 200 (320)
++|+||||||.... +.+.++++..+++|+.|+.++++++.+... ++.++||++||.+.+...
T Consensus 102 ---~~d~vih~A~~~~~------~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~-~~~~~iv~~SS~~~~~~~~~~~~~E~ 171 (375)
T 1t2a_A 102 ---KPTEIYNLGAQSHV------KISFDLAEYTADVDGVGTLRLLDAVKTCGL-INSVKFYQASTSELYGKVQEIPQKET 171 (375)
T ss_dssp ---CCSEEEECCSCCCH------HHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGTCSCSSSSBCTT
T ss_pred ---CCCEEEECCCcccc------cccccCHHHHHHHHHHHHHHHHHHHHHhCC-CccceEEEecchhhhCCCCCCCCCcc
Confidence 46799999997532 113455678899999999999999987543 224799999998775421
Q ss_pred -CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc-----------------ccc---------CCC
Q 020854 201 -SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS-----------------IKR---------SSF 253 (320)
Q Consensus 201 -~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~-----------------~~~---------~~~ 253 (320)
+......|+.||++.+.+++.++.++ |+.+..+.|+.+..|-.. ... ...
T Consensus 172 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~ 248 (375)
T 1t2a_A 172 TPFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKR 248 (375)
T ss_dssp SCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEE
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCcee
Confidence 11235689999999999999998875 677777776654433110 000 011
Q ss_pred CCCCHHHHHHHHHHHhCCC
Q 020854 254 FVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 254 ~~~~~~~~a~~i~~~l~~~ 272 (320)
.+...+++|+.++..+..+
T Consensus 249 ~~i~v~Dva~a~~~~~~~~ 267 (375)
T 1t2a_A 249 DWGHAKDYVEAMWLMLQND 267 (375)
T ss_dssp CCEEHHHHHHHHHHHHHSS
T ss_pred eeEEHHHHHHHHHHHHhcC
Confidence 2457899999998887654
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=2.7e-18 Score=159.28 Aligned_cols=199 Identities=11% Similarity=0.002 Sum_probs=144.5
Q ss_pred CcccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHH
Q 020854 46 AKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIK 125 (320)
Q Consensus 46 ~~~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 125 (320)
...+...+++++||||+|+||++++++|+++|++|++++|+.++.... . ...+.++.+|++|. +.++++
T Consensus 22 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~--~~~v~~~~~Dl~d~--~~~~~~- 90 (379)
T 2c5a_A 22 EQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE------D--MFCDEFHLVDLRVM--ENCLKV- 90 (379)
T ss_dssp CCSCTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG------G--GTCSEEEECCTTSH--HHHHHH-
T ss_pred cccccccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh------c--cCCceEEECCCCCH--HHHHHH-
Confidence 344555689999999999999999999999999999999986542211 0 23467889999875 333333
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC-----
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP----- 200 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~----- 200 (320)
+. ++|+|||+||.... ..+ +.++.++.+++|+.++.++++++.. .+.++||++||...+...
T Consensus 91 --~~--~~d~Vih~A~~~~~--~~~---~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~~V~~SS~~v~~~~~~~~~ 157 (379)
T 2c5a_A 91 --TE--GVDHVFNLAADMGG--MGF---IQSNHSVIMYNNTMISFNMIEAARI----NGIKRFFYASSACIYPEFKQLET 157 (379)
T ss_dssp --HT--TCSEEEECCCCCCC--HHH---HTTCHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEEEEGGGSCGGGSSSS
T ss_pred --hC--CCCEEEECceecCc--ccc---cccCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeehheeCCCCCCCc
Confidence 33 46699999997532 111 1234577889999999999999754 345799999997664310
Q ss_pred -----------CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc-----------------ccC-
Q 020854 201 -----------SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI-----------------KRS- 251 (320)
Q Consensus 201 -----------~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~-----------------~~~- 251 (320)
+......|+.||++.+.+++.++.+. |++++++.||.+.++.... ..+
T Consensus 158 ~~~~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (379)
T 2c5a_A 158 TNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDR 234 (379)
T ss_dssp SSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSC
T ss_pred cCCCcCcccCCCCCCCChhHHHHHHHHHHHHHHHHHH---CCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCc
Confidence 11235689999999999999998774 7999999999998874310 000
Q ss_pred ---------CCCCCCHHHHHHHHHHHhCC
Q 020854 252 ---------SFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 252 ---------~~~~~~~~~~a~~i~~~l~~ 271 (320)
.......+++|+.++..+..
T Consensus 235 ~~~~g~g~~~~~~i~v~Dva~ai~~~l~~ 263 (379)
T 2c5a_A 235 FEMWGDGLQTRSFTFIDECVEGVLRLTKS 263 (379)
T ss_dssp EEEESCSCCEECCEEHHHHHHHHHHHHHS
T ss_pred eEEeCCCCeeEEEEEHHHHHHHHHHHhhc
Confidence 11245689999999888754
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.77 E-value=2.7e-18 Score=154.88 Aligned_cols=188 Identities=13% Similarity=0.073 Sum_probs=134.3
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCe
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV 133 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 133 (320)
++||||||+|+||++++++|+++|..|++..|+....+.. ...+..+.+|++|+ + +. +.+. ++
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~---------~~~~~~~~~Dl~~~--~-~~---~~~~--~~ 64 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFV---------NEAARLVKADLAAD--D-IK---DYLK--GA 64 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGS---------CTTEEEECCCTTTS--C-CH---HHHT--TC
T ss_pred CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhc---------CCCcEEEECcCChH--H-HH---HHhc--CC
Confidence 5799999999999999999999995455544444322111 34578888999863 2 12 2223 46
Q ss_pred EEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC---------CCCC
Q 020854 134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------SDPL 204 (320)
Q Consensus 134 d~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~---------~~~~ 204 (320)
|+|||+||.... +.+.++++..+++|+.|+.++++++.. .+.++||++||.+.+..+ +...
T Consensus 65 d~vih~a~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~ 134 (313)
T 3ehe_A 65 EEVWHIAANPDV------RIGAENPDEIYRNNVLATYRLLEAMRK----AGVSRIVFTSTSTVYGEAKVIPTPEDYPTHP 134 (313)
T ss_dssp SEEEECCCCCCC------C-CCCCHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEECCGGGGCSCSSSSBCTTSCCCC
T ss_pred CEEEECCCCCCh------hhhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeCchHHhCcCCCCCCCCCCCCCC
Confidence 699999995432 234445688899999999999998543 456799999998765310 2234
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc-------------c-c--------cCCCCCCCHHHHH
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS-------------I-K--------RSSFFVPSTDVYA 262 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~-------------~-~--------~~~~~~~~~~~~a 262 (320)
...|+.||.+.+.+++.++.++ |++++.+.|+.+-.+-.. . . .........+++|
T Consensus 135 ~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva 211 (313)
T 3ehe_A 135 ISLYGASKLACEALIESYCHTF---DMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCV 211 (313)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHT---TCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHH
Confidence 5789999999999999999875 899999999999876422 0 0 0111256789999
Q ss_pred HHHHHHhCC
Q 020854 263 RAAMRWIGY 271 (320)
Q Consensus 263 ~~i~~~l~~ 271 (320)
+.++..+..
T Consensus 212 ~a~~~~~~~ 220 (313)
T 3ehe_A 212 DAMLFGLRG 220 (313)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHhcc
Confidence 999998873
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=6.3e-18 Score=153.79 Aligned_cols=200 Identities=14% Similarity=0.015 Sum_probs=139.5
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHH-HHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK-DVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.+++||||||+|+||++++++|+++|++|++++|+.++.. ...+.+ .....+.++.+|++|. +.++++.+..
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~--~~~~~~~~~~-- 85 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLREL---GIEGDIQYEDGDMADA--CSVQRAVIKA-- 85 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHT---TCGGGEEEEECCTTCH--HHHHHHHHHH--
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhc---cccCceEEEECCCCCH--HHHHHHHHHc--
Confidence 4688999999999999999999999999999999865421 111111 1134578889999975 4455544433
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccccCC--------
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPS-------- 201 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~~~-------- 201 (320)
++|+|||+||.... +.+.++.+..+++|+.++.++++++.+. + .++||++||.+.+....
T Consensus 86 -~~d~Vih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS~~v~g~~~~~~~~E~~ 154 (335)
T 1rpn_A 86 -QPQEVYNLAAQSFV------GASWNQPVTTGVVDGLGVTHLLEAIRQF----SPETRFYQASTSEMFGLIQAERQDENT 154 (335)
T ss_dssp -CCSEEEECCSCCCH------HHHTTSHHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEEGGGGCSCSSSSBCTTS
T ss_pred -CCCEEEECccccch------hhhhhChHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEeCHHHhCCCCCCCCCccc
Confidence 46699999996532 1112235778899999999999998653 3 37999999977654211
Q ss_pred -CCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc-----------------cccC---------CCC
Q 020854 202 -DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS-----------------IKRS---------SFF 254 (320)
Q Consensus 202 -~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~-----------------~~~~---------~~~ 254 (320)
......|+.||++.+.+++.++.++ |+++..+.|+.+-.|... ...+ ...
T Consensus 155 ~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~ 231 (335)
T 1rpn_A 155 PFYPRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRD 231 (335)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEE
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHc---CCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceec
Confidence 0124589999999999999998775 688888888776554211 0000 011
Q ss_pred CCCHHHHHHHHHHHhCCC
Q 020854 255 VPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 255 ~~~~~~~a~~i~~~l~~~ 272 (320)
....+++|+.++..+..+
T Consensus 232 ~i~v~Dva~a~~~~~~~~ 249 (335)
T 1rpn_A 232 WGFAGDYVEAMWLMLQQD 249 (335)
T ss_dssp CEEHHHHHHHHHHHHHSS
T ss_pred eEEHHHHHHHHHHHHhcC
Confidence 456799999999888654
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.76 E-value=7e-18 Score=153.15 Aligned_cols=165 Identities=16% Similarity=0.078 Sum_probs=125.8
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCe
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV 133 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 133 (320)
++++||||+|+||++++++|+++|++|++++|+..... +.+ ...+..+.+|++|. +.++++.+. .++
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~-----~~~~~~~~~D~~~~--~~~~~~~~~---~~~ 68 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---DAI-----TEGAKFYNGDLRDK--AFLRDVFTQ---ENI 68 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GGS-----CTTSEEEECCTTCH--HHHHHHHHH---SCE
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---hhc-----CCCcEEEECCCCCH--HHHHHHHhh---cCC
Confidence 57999999999999999999999999999998754322 111 12577889999875 444444443 368
Q ss_pred EEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC---------CCCC
Q 020854 134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------SDPL 204 (320)
Q Consensus 134 d~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~---------~~~~ 204 (320)
|+|||+||.... ..+.++.+..+++|+.++.++++++.. .+.+++|++||.+.+..+ +...
T Consensus 69 d~vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~ 138 (330)
T 2c20_A 69 EAVMHFAADSLV------GVSMEKPLQYYNNNVYGALCLLEVMDE----FKVDKFIFSSTAATYGEVDVDLITEETMTNP 138 (330)
T ss_dssp EEEEECCCCCCH------HHHHHSHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGGGCSCSSSSBCTTSCCCC
T ss_pred CEEEECCcccCc------cccccCHHHHHHHHhHHHHHHHHHHHH----cCCCEEEEeCCceeeCCCCCCCCCcCCCCCC
Confidence 899999997542 113445678899999999999998643 456799999997765421 1123
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecC
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATK 244 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~ 244 (320)
...|+.||++.+.+++.++.++ |++++.+.||.+-.+
T Consensus 139 ~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~ 175 (330)
T 2c20_A 139 TNTYGETKLAIEKMLHWYSQAS---NLRYKIFRYFNVAGA 175 (330)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTS---SCEEEEEECSEEECC
T ss_pred CChHHHHHHHHHHHHHHHHHHh---CCcEEEEecCcccCC
Confidence 5789999999999999998764 899999999988765
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=9.7e-18 Score=155.47 Aligned_cols=203 Identities=17% Similarity=0.093 Sum_probs=138.3
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHH-----HHHHHHHHHhhcCCc-eEEEEEEeCCCCcHHHHHHHHHH
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK-----LKDVSDSIQAKYAKT-QIKSVVVDFSGDLDEGVERIKEA 127 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~-----~~~~~~~l~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~ 127 (320)
|+||||||+|+||.+++++|+++|++|++++|+.++ ++...+++... +. .+.++.+|++|. +.++++.+.
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~--~~~~~~~~~ 104 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV--NKALMKLHYADLTDA--SSLRRWIDV 104 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC----------CCEEEEECCTTCH--HHHHHHHHH
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccc--cccceEEEECCCCCH--HHHHHHHHh
Confidence 789999999999999999999999999999998653 22222211111 12 578889999975 445554443
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC-CCcEEEEEcCccccccC------
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSGAAIVIP------ 200 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-~~g~Iv~vsS~~~~~~~------ 200 (320)
. ++|+|||+||.... +.+.++++..+++|+.|+.++++++.+...++ +.++||++||.+.+...
T Consensus 105 ~---~~d~Vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E 175 (381)
T 1n7h_A 105 I---KPDEVYNLAAQSHV------AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSE 175 (381)
T ss_dssp H---CCSEEEECCSCCCH------HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCT
T ss_pred c---CCCEEEECCcccCc------cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCC
Confidence 3 46799999997542 12345578889999999999999999876542 35799999998765311
Q ss_pred --CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEE------EEeccceecCC----C-------ccc---------cCC
Q 020854 201 --SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQ------CQVPLYVATKM----A-------SIK---------RSS 252 (320)
Q Consensus 201 --~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~------~v~PG~v~T~~----~-------~~~---------~~~ 252 (320)
+......|+.||++.+.+++.++.++ |+.+. .+.||...+.+ . ... ...
T Consensus 176 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~ 252 (381)
T 1n7h_A 176 TTPFHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQAS 252 (381)
T ss_dssp TSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCE
T ss_pred CCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCce
Confidence 12335789999999999999998876 34333 33344322210 0 000 011
Q ss_pred CCCCCHHHHHHHHHHHhCCC
Q 020854 253 FFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 253 ~~~~~~~~~a~~i~~~l~~~ 272 (320)
..+...+++|+.++..+..+
T Consensus 253 ~~~v~v~Dva~a~~~~~~~~ 272 (381)
T 1n7h_A 253 RDWGFAGDYVEAMWLMLQQE 272 (381)
T ss_dssp EECEEHHHHHHHHHHHHTSS
T ss_pred eeeEEHHHHHHHHHHHHhCC
Confidence 12467889999998888654
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=9.6e-18 Score=152.78 Aligned_cols=193 Identities=19% Similarity=0.146 Sum_probs=138.6
Q ss_pred EEEEECCCCcHHHHHHHHHHHc---C---CeEEEEeCCHHH--HHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHH
Q 020854 55 WALVTGPTDGIGKSFAFQLAKT---G---LNLVLVGRNPDK--LKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKE 126 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~---G---~~Vil~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 126 (320)
+++||||+|+||++++++|+++ | ++|++++|+... .+.. +.+. ....+.++.+|++|. +.+++
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~-~~~~---~~~~~~~~~~Dl~d~--~~~~~--- 72 (337)
T 1r6d_A 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL-APVD---ADPRLRFVHGDIRDA--GLLAR--- 72 (337)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG-GGGT---TCTTEEEEECCTTCH--HHHHH---
T ss_pred eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhh-hhcc---cCCCeEEEEcCCCCH--HHHHH---
Confidence 5999999999999999999997 8 999999986421 1111 1111 134688899999975 33333
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC------
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP------ 200 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~------ 200 (320)
.+. ++|+|||+||.... +.+.++.++.+++|+.++.++++++.+. +.++||++||.+.+...
T Consensus 73 ~~~--~~d~Vih~A~~~~~------~~~~~~~~~~~~~Nv~~~~~l~~a~~~~----~~~~~v~~SS~~vyg~~~~~~~~ 140 (337)
T 1r6d_A 73 ELR--GVDAIVHFAAESHV------DRSIAGASVFTETNVQGTQTLLQCAVDA----GVGRVVHVSTNQVYGSIDSGSWT 140 (337)
T ss_dssp HTT--TCCEEEECCSCCCH------HHHHHCCHHHHHHHTHHHHHHHHHHHHT----TCCEEEEEEEGGGGCCCSSSCBC
T ss_pred Hhc--CCCEEEECCCccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEecchHHhCCCCCCCCC
Confidence 334 46699999997532 1223445778999999999999998764 35799999997654311
Q ss_pred ---CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc-------------ccC---------CCCC
Q 020854 201 ---SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI-------------KRS---------SFFV 255 (320)
Q Consensus 201 ---~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~-------------~~~---------~~~~ 255 (320)
+......|+.||++.+.+++.++.++ |++++.+.||.+.++.... ..+ ....
T Consensus 141 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (337)
T 1r6d_A 141 ESSPLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREW 217 (337)
T ss_dssp TTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEE
T ss_pred CCCCCCCCCchHHHHHHHHHHHHHHHHHH---CCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEee
Confidence 12345789999999999999998875 7999999999998876320 000 0123
Q ss_pred CCHHHHHHHHHHHhCC
Q 020854 256 PSTDVYARAAMRWIGY 271 (320)
Q Consensus 256 ~~~~~~a~~i~~~l~~ 271 (320)
..++++|+.++..+..
T Consensus 218 i~v~Dva~a~~~~~~~ 233 (337)
T 1r6d_A 218 VHTDDHCRGIALVLAG 233 (337)
T ss_dssp EEHHHHHHHHHHHHHH
T ss_pred EeHHHHHHHHHHHHhC
Confidence 4688999998887753
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.75 E-value=4.8e-18 Score=154.79 Aligned_cols=191 Identities=16% Similarity=0.098 Sum_probs=132.3
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
.+++++++||||+|+||++++++|+++|++|++++|+.....+. +.+ -..+..+.+|++|. +.++++.+.
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---l~~---~~~~~~~~~Dl~d~--~~~~~~~~~-- 87 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREH---LKD---HPNLTFVEGSIADH--ALVNQLIGD-- 87 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---SCC---CTTEEEEECCTTCH--HHHHHHHHH--
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhh---Hhh---cCCceEEEEeCCCH--HHHHHHHhc--
Confidence 35689999999999999999999999999999999985432111 100 13577889999986 444444443
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccc----cCC----
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV----IPS---- 201 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~----~~~---- 201 (320)
.++|+||||||.... . +.++.+ +++|+.++.++++++.+ .+.++||++||.+.+. .+.
T Consensus 88 -~~~D~vih~A~~~~~--~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~g~~~~~~~~~~~ 153 (333)
T 2q1w_A 88 -LQPDAVVHTAASYKD--P-----DDWYND--TLTNCVGGSNVVQAAKK----NNVGRFVYFQTALCYGVKPIQQPVRLD 153 (333)
T ss_dssp -HCCSEEEECCCCCSC--T-----TCHHHH--HHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGCSCCCSSSBCTT
T ss_pred -cCCcEEEECceecCC--C-----ccCChH--HHHHHHHHHHHHHHHHH----hCCCEEEEECcHHHhCCCcccCCCCcC
Confidence 246699999997542 1 223344 89999999999999876 3567999999977653 110
Q ss_pred ---CCCchhhHHHHHHHHHHHHH-HHHHHccCCceEEEEeccceecCCCc-------------cc-----cCCCCCCCHH
Q 020854 202 ---DPLYSVYAATKAYIDQFSRS-LYVEYRKSGIDVQCQVPLYVATKMAS-------------IK-----RSSFFVPSTD 259 (320)
Q Consensus 202 ---~~~~~~Y~asKaal~~~~~~-l~~el~~~gi~v~~v~PG~v~T~~~~-------------~~-----~~~~~~~~~~ 259 (320)
.|....|+.||++.+.+++. ++ ++..+.|+.+-.|-.. .. ........++
T Consensus 154 E~~~p~~~~Y~~sK~~~E~~~~~s~~--------~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 225 (333)
T 2q1w_A 154 HPRNPANSSYAISKSANEDYLEYSGL--------DFVTFRLANVVGPRNVSGPLPIFFQRLSEGKKCFVTKARRDFVFVK 225 (333)
T ss_dssp SCCCCTTCHHHHHHHHHHHHHHHHTC--------CEEEEEESEEESTTCCSSHHHHHHHHHHTTCCCEEEECEECEEEHH
T ss_pred CCCCCCCCchHHHHHHHHHHHHhhhC--------CeEEEeeceEECcCCcCcHHHHHHHHHHcCCeeeCCCceEeeEEHH
Confidence 22227899999999999887 64 5566677655444310 00 0112246789
Q ss_pred HHHHHHHHHhCCC
Q 020854 260 VYARAAMRWIGYE 272 (320)
Q Consensus 260 ~~a~~i~~~l~~~ 272 (320)
++|+.++..+..+
T Consensus 226 Dva~ai~~~~~~~ 238 (333)
T 2q1w_A 226 DLARATVRAVDGV 238 (333)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhcC
Confidence 9999999988653
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.75 E-value=2.9e-17 Score=149.82 Aligned_cols=191 Identities=14% Similarity=0.089 Sum_probs=138.3
Q ss_pred CEEEEECCCCcHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKT-GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~-G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
++++||||+|+||++++++|+++ |++|++++|+.++.+... ....+.++.+|++|.. +.++++.+ +
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~D~~~~~-~~~~~~~~-----~ 67 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDISIHS-EWIEYHVK-----K 67 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-------TCTTEEEEECCTTTCS-HHHHHHHH-----H
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh-------cCCCeEEEeccccCcH-HHHHhhcc-----C
Confidence 46999999999999999999998 899999999876643211 1346788999999742 23333332 3
Q ss_pred eEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCC----------
Q 020854 133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD---------- 202 (320)
Q Consensus 133 id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~---------- 202 (320)
+|+|||+||...+ . ...++.+..+++|+.++.++++++.. .+ ++||++||.+.+.....
T Consensus 68 ~d~vih~A~~~~~--~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~ 136 (345)
T 2bll_A 68 CDVVLPLVAIATP--I----EYTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEVYGMCSDKYFDEDHSNL 136 (345)
T ss_dssp CSEEEECBCCCCH--H----HHHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGGGBTCCCSSBCTTTCCC
T ss_pred CCEEEEcccccCc--c----chhcCHHHHHHHHHHHHHHHHHHHHH----hC-CeEEEEecHHHcCCCCCCCcCCccccc
Confidence 5699999997542 1 11234567889999999999988754 34 79999999776531110
Q ss_pred ------CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc----------------------ccc----
Q 020854 203 ------PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS----------------------IKR---- 250 (320)
Q Consensus 203 ------~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~----------------------~~~---- 250 (320)
.....|+.||.+.+.+++.++.+. |++++++.||.+..+... ...
T Consensus 137 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (345)
T 2bll_A 137 IVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLI 213 (345)
T ss_dssp BCCCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEG
T ss_pred ccCcccCcccccHHHHHHHHHHHHHHHHhc---CCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEE
Confidence 112379999999999999998774 899999999999766421 000
Q ss_pred ----CCCCCCCHHHHHHHHHHHhCC
Q 020854 251 ----SSFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 251 ----~~~~~~~~~~~a~~i~~~l~~ 271 (320)
........+++|+.++..+..
T Consensus 214 ~~g~~~~~~i~v~Dva~a~~~~~~~ 238 (345)
T 2bll_A 214 DGGKQKRCFTDIRDGIEALYRIIEN 238 (345)
T ss_dssp GGSCCEEECEEHHHHHHHHHHHHHC
T ss_pred CCCCEEEEEEEHHHHHHHHHHHHhh
Confidence 001256889999999988754
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.4e-17 Score=154.35 Aligned_cols=171 Identities=12% Similarity=0.019 Sum_probs=126.9
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcC-CeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G-~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
.+++++++||||+|+||++++++|+++| ++|++++|+.++..+ .+. ....+.++.+|++|. + .+.+.+
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~l~---~~~~v~~~~~Dl~d~--~---~l~~~~ 97 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI---NVP---DHPAVRFSETSITDD--A---LLASLQ 97 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG---GSC---CCTTEEEECSCTTCH--H---HHHHCC
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh---hcc---CCCceEEEECCCCCH--H---HHHHHh
Confidence 4678999999999999999999999999 999999998654211 010 134578889999875 3 333333
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC-CCcEEEEEcCcccccc--------
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSGAAIVI-------- 199 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-~~g~Iv~vsS~~~~~~-------- 199 (320)
. ++|+|||+||.... ..+.++.+..+++|+.++.++++++.. . +.++||++||.+.+..
T Consensus 98 ~--~~d~Vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~V~~SS~~vyg~~~~~~~~~ 165 (377)
T 2q1s_A 98 D--EYDYVFHLATYHGN------QSSIHDPLADHENNTLTTLKLYERLKH----FKRLKKVVYSAAGCSIAEKTFDDAKA 165 (377)
T ss_dssp S--CCSEEEECCCCSCH------HHHHHCHHHHHHHHTHHHHHHHHHHTT----CSSCCEEEEEEEC-------------
T ss_pred h--CCCEEEECCCccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCCeEEEeCCHHHcCCCCCCCcCc
Confidence 4 46699999997532 123345678899999999999998743 3 4579999999764321
Q ss_pred -C-----CC-CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCC
Q 020854 200 -P-----SD-PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMA 246 (320)
Q Consensus 200 -~-----~~-~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~ 246 (320)
. +. .....|+.||++.+.+++.++.++ |++++++.||.+.++..
T Consensus 166 ~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~G~~~ 216 (377)
T 2q1s_A 166 TEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQNVYGPGE 216 (377)
T ss_dssp -CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTC
T ss_pred ccccccccccCCCCchHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCC
Confidence 0 11 335689999999999999998775 89999999999987654
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.74 E-value=6.1e-18 Score=152.26 Aligned_cols=191 Identities=14% Similarity=0.046 Sum_probs=138.6
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHc--CCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKT--GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~--G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
+++++||||+|+||.+++++|+++ |++|++++|+..+.+ +.. .+..+.+|++|. +.++++.+..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~~-----~~~~~~~D~~d~--~~~~~~~~~~-- 67 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VVN-----SGPFEVVNALDF--NQIEHLVEVH-- 67 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HHH-----SSCEEECCTTCH--HHHHHHHHHT--
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----ccC-----CCceEEecCCCH--HHHHHHHhhc--
Confidence 578999999999999999999999 899999999865521 111 245788999875 4444444332
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCC---------
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS--------- 201 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~--------- 201 (320)
++|+|||+||.... . ..++.+..+++|+.++.++++++.+ .+.+++|++||...+....
T Consensus 68 -~~d~vih~a~~~~~--~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~ 135 (312)
T 2yy7_A 68 -KITDIYLMAALLSA--T-----AEKNPAFAWDLNMNSLFHVLNLAKA----KKIKKIFWPSSIAVFGPTTPKENTPQYT 135 (312)
T ss_dssp -TCCEEEECCCCCHH--H-----HHHCHHHHHHHHHHHHHHHHHHHHT----TSCSEEECCEEGGGCCTTSCSSSBCSSC
T ss_pred -CCCEEEECCccCCC--c-----hhhChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHHhCCCCCCCCccccC
Confidence 46799999996532 0 1244677899999999999998754 3457999999987654211
Q ss_pred -CCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc------------------ccc--------CCCC
Q 020854 202 -DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS------------------IKR--------SSFF 254 (320)
Q Consensus 202 -~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~------------------~~~--------~~~~ 254 (320)
......|+.||.+.+.+++.++.++ |++++.+.||.+-.+... ... ....
T Consensus 136 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (312)
T 2yy7_A 136 IMEPSTVYGISKQAGERWCEYYHNIY---GVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMP 212 (312)
T ss_dssp BCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEE
T ss_pred cCCCCchhHHHHHHHHHHHHHHHHhc---CCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceee
Confidence 1125689999999999999988775 899999999988764210 000 0111
Q ss_pred CCCHHHHHHHHHHHhCCC
Q 020854 255 VPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 255 ~~~~~~~a~~i~~~l~~~ 272 (320)
....+++|+.++..+..+
T Consensus 213 ~i~v~Dva~a~~~~~~~~ 230 (312)
T 2yy7_A 213 MMYMDDAIDATINIMKAP 230 (312)
T ss_dssp EEEHHHHHHHHHHHHHSC
T ss_pred eeeHHHHHHHHHHHHhCc
Confidence 346799999999888643
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.74 E-value=3.7e-18 Score=155.63 Aligned_cols=196 Identities=20% Similarity=0.206 Sum_probs=131.9
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHH--HHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV--SDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~--~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
+|++|||||+|+||++++++|+++|++|+++.|+.++.++. ...+. ....+.++.+|++|. +.++++ +.+
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~--~~~~~~---~~~ 80 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ---ELGDLKIFRADLTDE--LSFEAP---IAG 80 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG---GGSCEEEEECCTTTS--SSSHHH---HTT
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC---CCCcEEEEecCCCCh--HHHHHH---HcC
Confidence 68999999999999999999999999999999986543211 11221 123577889999985 222222 333
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccccc-----C--C--
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI-----P--S-- 201 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~-----~--~-- 201 (320)
+|+|||+||... +. ..+..++.+++|+.|+.++++++.+.. +.++||++||.++... + +
T Consensus 81 --~D~Vih~A~~~~-----~~--~~~~~~~~~~~nv~gt~~ll~aa~~~~---~v~r~V~~SS~~~~~~~~~~~~~~~~~ 148 (338)
T 2rh8_A 81 --CDFVFHVATPVH-----FA--SEDPENDMIKPAIQGVVNVMKACTRAK---SVKRVILTSSAAAVTINQLDGTGLVVD 148 (338)
T ss_dssp --CSEEEEESSCCC-----C-----------CHHHHHHHHHHHHHHHHCT---TCCEEEEECCHHHHHHHHHTCSCCCCC
T ss_pred --CCEEEEeCCccC-----CC--CCCcHHHHHHHHHHHHHHHHHHHHHcC---CcCEEEEEecHHHeecCCcCCCCcccC
Confidence 569999998542 11 111224588999999999999987632 2579999999874210 0 0
Q ss_pred -------------CCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccC-----------------
Q 020854 202 -------------DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRS----------------- 251 (320)
Q Consensus 202 -------------~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~----------------- 251 (320)
.+....|+.||.+.+.+++.++.+ .|++++++.||.+.+|......+
T Consensus 149 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~ 225 (338)
T 2rh8_A 149 EKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLI 225 (338)
T ss_dssp TTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHH---HTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHH
T ss_pred hhhccchhhccccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccc
Confidence 001125999999988888776654 48999999999999986431100
Q ss_pred -----------CCCCCCHHHHHHHHHHHhCC
Q 020854 252 -----------SFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 252 -----------~~~~~~~~~~a~~i~~~l~~ 271 (320)
......++++|+.++..+..
T Consensus 226 ~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~ 256 (338)
T 2rh8_A 226 NGMKGMQMLSGSVSIAHVEDVCRAHIFVAEK 256 (338)
T ss_dssp HHHHHHHHHHSSEEEEEHHHHHHHHHHHHHC
T ss_pred ccccccccccCcccEEEHHHHHHHHHHHHcC
Confidence 00246778888888877754
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.74 E-value=1.9e-17 Score=149.40 Aligned_cols=183 Identities=14% Similarity=0.105 Sum_probs=104.9
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
+++++||||||+||++++++|+++|++|++++|+.++ ++ .+.+|++|. +.++++.+.. +
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------------~~----~~~~Dl~d~--~~~~~~~~~~---~ 60 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR------------PK----FEQVNLLDS--NAVHHIIHDF---Q 60 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC------------------------------------CHHHHHHH---C
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC------------CC----eEEecCCCH--HHHHHHHHhh---C
Confidence 6899999999999999999999999999999987543 01 567888875 3333433332 4
Q ss_pred eEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC--------CCCC
Q 020854 133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP--------SDPL 204 (320)
Q Consensus 133 id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~--------~~~~ 204 (320)
+|+|||+||.... +.+.+++++.+++|+.++.++++++.+. + ++||++||...+... +...
T Consensus 61 ~d~vih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~v~~SS~~v~~~~~~~~~E~~~~~~ 129 (315)
T 2ydy_A 61 PHVIVHCAAERRP------DVVENQPDAASQLNVDASGNLAKEAAAV----G-AFLIYISSDYVFDGTNPPYREEDIPAP 129 (315)
T ss_dssp CSEEEECC-------------------------CHHHHHHHHHHHHH----T-CEEEEEEEGGGSCSSSCSBCTTSCCCC
T ss_pred CCEEEECCcccCh------hhhhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEchHHHcCCCCCCCCCCCCCCC
Confidence 6699999997542 2245567889999999999999998762 2 499999998875420 1233
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceec---CCCc---------cc------cCCCCCCCHHHHHHHHH
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVAT---KMAS---------IK------RSSFFVPSTDVYARAAM 266 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T---~~~~---------~~------~~~~~~~~~~~~a~~i~ 266 (320)
...|+.||++.+.+++.++.++ ..+|++.|. |..++ ++.. .. ........++++|+.++
T Consensus 130 ~~~Y~~sK~~~e~~~~~~~~~~--~~lR~~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~ 206 (315)
T 2ydy_A 130 LNLYGKTKLDGEKAVLENNLGA--AVLRIPILY-GEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCR 206 (315)
T ss_dssp CSHHHHHHHHHHHHHHHHCTTC--EEEEECSEE-CSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHhCCCe--EEEeeeeee-CCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHH
Confidence 5789999999999998875432 234555444 43333 2211 00 01123457899999988
Q ss_pred HHhC
Q 020854 267 RWIG 270 (320)
Q Consensus 267 ~~l~ 270 (320)
..+.
T Consensus 207 ~~~~ 210 (315)
T 2ydy_A 207 QLAE 210 (315)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7764
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.8e-17 Score=153.15 Aligned_cols=193 Identities=16% Similarity=0.136 Sum_probs=141.1
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCC-CCcHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKT-GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS-GDLDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~-G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~ 128 (320)
+++++|+||||+|+||.+++++|+++ |++|++++|+.++.....+ ...+.++.+|++ |. +.++++.+
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-------~~~v~~~~~Dl~~d~--~~~~~~~~-- 90 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK-------HERMHFFEGDITINK--EWVEYHVK-- 90 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG-------STTEEEEECCTTTCH--HHHHHHHH--
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc-------CCCeEEEeCccCCCH--HHHHHHhc--
Confidence 56899999999999999999999998 9999999998765443211 346889999999 54 44444433
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCC------
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD------ 202 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~------ 202 (320)
++|+|||+||..... ...++..+.+++|+.++.++++++... + +++|++||.+.+.....
T Consensus 91 ---~~d~Vih~A~~~~~~------~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~v~~SS~~vyg~~~~~~~~e~ 156 (372)
T 3slg_A 91 ---KCDVILPLVAIATPA------TYVKQPLRVFELDFEANLPIVRSAVKY----G-KHLVFPSTSEVYGMCADEQFDPD 156 (372)
T ss_dssp ---HCSEEEECBCCCCHH------HHHHCHHHHHHHHTTTTHHHHHHHHHH----T-CEEEEECCGGGGBSCCCSSBCTT
T ss_pred ---cCCEEEEcCccccHH------HHhhCHHHHHHHHHHHHHHHHHHHHHh----C-CcEEEeCcHHHhCCCCCCCCCcc
Confidence 356999999976531 123345678899999999998887542 3 79999999765432100
Q ss_pred ----------CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc----------------------cc-
Q 020854 203 ----------PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS----------------------IK- 249 (320)
Q Consensus 203 ----------~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~----------------------~~- 249 (320)
.....|+.||.+.+.+++.++.+ |+++..+.|+.+-.+-.. ..
T Consensus 157 ~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (372)
T 3slg_A 157 ASALTYGPINKPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEN 232 (372)
T ss_dssp TCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCC
T ss_pred ccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCC
Confidence 22347999999999999988765 899999999998666421 00
Q ss_pred -------cCCCCCCCHHHHHHHHHHHhCCC
Q 020854 250 -------RSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 250 -------~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
.........+++|+.++..+..+
T Consensus 233 ~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~ 262 (372)
T 3slg_A 233 ISLVDGGSQKRAFTYVDDGISALMKIIENS 262 (372)
T ss_dssp EEEGGGGCCEEECEEHHHHHHHHHHHHHCG
T ss_pred cEEeCCCceEEEEEEHHHHHHHHHHHHhcc
Confidence 01112457899999999988653
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=4e-17 Score=163.05 Aligned_cols=177 Identities=17% Similarity=0.146 Sum_probs=126.0
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
.+++++|+||||+|+||++++++|+++|++|++++|+..+..+..+++.... ...+..+.+|++|. +.++++.+..
T Consensus 8 ~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~v~~v~~Dl~d~--~~l~~~~~~~- 83 (699)
T 1z45_A 8 ESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT-KHHIPFYEVDLCDR--KGLEKVFKEY- 83 (699)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH-TSCCCEEECCTTCH--HHHHHHHHHS-
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhcc-CCceEEEEcCCCCH--HHHHHHHHhC-
Confidence 3568999999999999999999999999999999987543222222332211 34577889999976 4444444433
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC---------
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP--------- 200 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~--------- 200 (320)
++|+|||+||.... .. ..+...+.+++|+.++.++++++.. .+.++||++||.+.+...
T Consensus 84 --~~D~Vih~A~~~~~--~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~~iV~~SS~~vyg~~~~~~~~~~~ 151 (699)
T 1z45_A 84 --KIDSVIHFAGLKAV--GE----STQIPLRYYHNNILGTVVLLELMQQ----YNVSKFVFSSSATVYGDATRFPNMIPI 151 (699)
T ss_dssp --CCCEEEECCSCCCH--HH----HHHSHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCCGGGSTTCCSB
T ss_pred --CCCEEEECCcccCc--Cc----cccCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEECcHHHhCCCccccccCCc
Confidence 56799999997542 11 1122356789999999999877543 356799999998754310
Q ss_pred ----CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceec
Q 020854 201 ----SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVAT 243 (320)
Q Consensus 201 ----~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T 243 (320)
+......|+.||++.+.+++.++.+. ..|+++..+.|+.+-.
T Consensus 152 ~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~vyG 197 (699)
T 1z45_A 152 PEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIG 197 (699)
T ss_dssp CTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEEC
T ss_pred cccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEeccccC
Confidence 01124689999999999999998775 4689999999887654
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=2.9e-17 Score=150.05 Aligned_cols=193 Identities=11% Similarity=0.055 Sum_probs=136.8
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
+++++|+||||+|+||++++++|+++|++|++++|+.....+..+.+ .....+..+.+|+.+.. +.
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~----------~~- 90 (343)
T 2b69_A 25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW---IGHENFELINHDVVEPL----------YI- 90 (343)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGG---TTCTTEEEEECCTTSCC----------CC-
T ss_pred cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhh---ccCCceEEEeCccCChh----------hc-
Confidence 56899999999999999999999999999999999743211111111 11345788889988751 22
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC----------
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------- 200 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~---------- 200 (320)
++|+|||+||.... ... .++.+..+++|+.++.++++++... + .++|++||.+.+...
T Consensus 91 -~~d~vih~A~~~~~--~~~----~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~v~~SS~~v~g~~~~~~~~E~~~ 158 (343)
T 2b69_A 91 -EVDQIYHLASPASP--PNY----MYNPIKTLKTNTIGTLNMLGLAKRV----G-ARLLLASTSEVYGDPEVHPQSEDYW 158 (343)
T ss_dssp -CCSEEEECCSCCSH--HHH----TTCHHHHHHHHHHHHHHHHHHHHHH----T-CEEEEEEEGGGGBSCSSSSBCTTCC
T ss_pred -CCCEEEECccccCc--hhh----hhCHHHHHHHHHHHHHHHHHHHHHh----C-CcEEEECcHHHhCCCCCCCCccccc
Confidence 46799999997542 111 1124677899999999999988652 2 489999997654310
Q ss_pred ----CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc----------------ccc--------CC
Q 020854 201 ----SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS----------------IKR--------SS 252 (320)
Q Consensus 201 ----~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~----------------~~~--------~~ 252 (320)
+......|+.||++.+.+++.++.+. |++++.+.||.+.++... ... ..
T Consensus 159 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (343)
T 2b69_A 159 GHVNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQT 235 (343)
T ss_dssp CBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCE
T ss_pred ccCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeE
Confidence 12235679999999999999988764 899999999999877421 000 01
Q ss_pred CCCCCHHHHHHHHHHHhCCC
Q 020854 253 FFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 253 ~~~~~~~~~a~~i~~~l~~~ 272 (320)
......+++|+.++..+..+
T Consensus 236 ~~~v~v~Dva~a~~~~~~~~ 255 (343)
T 2b69_A 236 RAFQYVSDLVNGLVALMNSN 255 (343)
T ss_dssp EECEEHHHHHHHHHHHHTSS
T ss_pred EeeEeHHHHHHHHHHHHhcC
Confidence 12457889999998887643
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=2.1e-17 Score=151.92 Aligned_cols=194 Identities=14% Similarity=0.092 Sum_probs=134.1
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcC-CeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G-~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
+.+++++||||+|+||.+++++|+++| ++|++++|+..... .+.+ .+.. +.+|++|. +.++.+.+...
T Consensus 44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~----~~~~---~~~d~~~~--~~~~~~~~~~~ 112 (357)
T 2x6t_A 44 IEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNL----VDLN---IADYMDKE--DFLIQIMAGEE 112 (357)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGT----TTSC---CSEEEEHH--HHHHHHHTTCC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhcc----cCce---EeeecCcH--HHHHHHHhhcc
Confidence 567899999999999999999999999 89999999765421 0111 1212 56777654 44444433210
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCC-------
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD------- 202 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~------- 202 (320)
-.++|+|||+||.... +.++++..+++|+.++.++++++.+. +. +||++||.+.+.....
T Consensus 113 ~~~~d~Vih~A~~~~~--------~~~~~~~~~~~n~~~~~~ll~a~~~~----~~-r~V~~SS~~v~g~~~~~~~~E~~ 179 (357)
T 2x6t_A 113 FGDVEAIFHEGACSST--------TEWDGKYMMDNNYQYSKELLHYCLER----EI-PFLYASSAATYGGRTSDFIESRE 179 (357)
T ss_dssp CSSCCEEEECCSCCCT--------TCCCHHHHHHHTHHHHHHHHHHHHHH----TC-CEEEEEEGGGGCSCSSCCCSSGG
T ss_pred cCCCCEEEECCcccCC--------ccCCHHHHHHHHHHHHHHHHHHHHHc----CC-eEEEEcchHHhCCCCCCCcCCcC
Confidence 0147799999997542 12235778899999999999998762 34 8999999877542110
Q ss_pred --CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc------------------ccc-----C----CC
Q 020854 203 --PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS------------------IKR-----S----SF 253 (320)
Q Consensus 203 --~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~------------------~~~-----~----~~ 253 (320)
.....|+.||.+.+.+++.++.+ .|++++.+.||.+.++... ... + ..
T Consensus 180 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (357)
T 2x6t_A 180 YEKPLNVFGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKR 256 (357)
T ss_dssp GCCCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEE
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceE
Confidence 12568999999999999998876 4899999999999876421 000 0 11
Q ss_pred CCCCHHHHHHHHHHHhCC
Q 020854 254 FVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 254 ~~~~~~~~a~~i~~~l~~ 271 (320)
.+..++++|+.++..+..
T Consensus 257 ~~i~v~Dva~ai~~~~~~ 274 (357)
T 2x6t_A 257 DFVYVGDVADVNLWFLEN 274 (357)
T ss_dssp CEEEHHHHHHHHHHHHHH
T ss_pred ccEEHHHHHHHHHHHHhc
Confidence 235789999999888754
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.6e-17 Score=145.26 Aligned_cols=178 Identities=14% Similarity=0.119 Sum_probs=125.7
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeE
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG 134 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 134 (320)
+++||||+|+||++++++|+ +|++|++++|+.+. + .+ +.+|++|. +.++++.+.. ++|
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~-~----------~~-----~~~Dl~~~--~~~~~~~~~~---~~d 59 (273)
T 2ggs_A 2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI-Q----------GG-----YKLDLTDF--PRLEDFIIKK---RPD 59 (273)
T ss_dssp CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC-T----------TC-----EECCTTSH--HHHHHHHHHH---CCS
T ss_pred EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC-C----------CC-----ceeccCCH--HHHHHHHHhc---CCC
Confidence 59999999999999999999 58999999998742 0 12 78899875 4455544433 466
Q ss_pred EEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCC--------CCch
Q 020854 135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD--------PLYS 206 (320)
Q Consensus 135 ~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~--------~~~~ 206 (320)
+||||||.... +.+.+++++.+++|+.++.++++++.+ . +++||++||...+..... ....
T Consensus 60 ~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~iv~~SS~~~~~~~~~~~~e~~~~~~~~ 128 (273)
T 2ggs_A 60 VIINAAAMTDV------DKCEIEKEKAYKINAEAVRHIVRAGKV----I-DSYIVHISTDYVFDGEKGNYKEEDIPNPIN 128 (273)
T ss_dssp EEEECCCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHH----T-TCEEEEEEEGGGSCSSSCSBCTTSCCCCSS
T ss_pred EEEECCcccCh------hhhhhCHHHHHHHhHHHHHHHHHHHHH----h-CCeEEEEecceeEcCCCCCcCCCCCCCCCC
Confidence 99999997542 123456788999999999999999864 2 359999999987652111 1256
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc-------ccC------CCCCCCHHHHHHHHHHHhCCC
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI-------KRS------SFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~-------~~~------~~~~~~~~~~a~~i~~~l~~~ 272 (320)
.|+.||++.+.+++. +....+|++.|. | ++++... ..+ ......++++|+.++..+..+
T Consensus 129 ~Y~~sK~~~e~~~~~----~~~~~iR~~~v~-G--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~~ 200 (273)
T 2ggs_A 129 YYGLSKLLGETFALQ----DDSLIIRTSGIF-R--NKGFPIYVYKTLKEGKTVFAFKGYYSPISARKLASAILELLELR 200 (273)
T ss_dssp HHHHHHHHHHHHHCC----TTCEEEEECCCB-S--SSSHHHHHHHHHHTTCCEEEESCEECCCBHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhC----CCeEEEeccccc-c--ccHHHHHHHHHHHcCCCEEeecCCCCceEHHHHHHHHHHHHhcC
Confidence 899999999999877 222345555554 3 2333210 000 223578999999999888643
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=2.6e-16 Score=142.23 Aligned_cols=155 Identities=13% Similarity=0.126 Sum_probs=117.5
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
++++++||||+|+||.+++++|+++|++|++++|+. .+|++|. +.++++.+..
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~----------------------~~D~~d~--~~~~~~~~~~--- 54 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDS--RAVHDFFASE--- 54 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCH--HHHHHHHHHH---
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc----------------------cCCccCH--HHHHHHHHhc---
Confidence 367899999999999999999999999999988763 1577764 4444444433
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccccc------------
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI------------ 199 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~------------ 199 (320)
++|+|||+||.... . +...++.+..+++|+.++.++++++.. .+.+++|++||...+..
T Consensus 55 ~~d~vih~a~~~~~--~---~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~E~~~~ 125 (321)
T 1e6u_A 55 RIDQVYLAAAKVGG--I---VANNTYPADFIYQNMMIESNIIHAAHQ----NDVNKLLFLGSSCIYPKLAKQPMAESELL 125 (321)
T ss_dssp CCSEEEECCCCCCC--H---HHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGGSCTTCCSSBCGGGTT
T ss_pred CCCEEEEcCeecCC--c---chhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCeEEEEccHHHcCCCCCCCcCccccc
Confidence 46699999997531 0 112334567889999999999998755 34569999999876531
Q ss_pred --CCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCC
Q 020854 200 --PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKM 245 (320)
Q Consensus 200 --~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~ 245 (320)
+..|....|+.||.+.+.+++.++.+. |++++++.||.+-.+-
T Consensus 126 ~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~ 170 (321)
T 1e6u_A 126 QGTLEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPH 170 (321)
T ss_dssp SSCCCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTT
T ss_pred cCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEEeCCcCCcC
Confidence 112223589999999999999988764 8999999999987764
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=8.7e-17 Score=145.08 Aligned_cols=155 Identities=19% Similarity=0.229 Sum_probs=117.2
Q ss_pred EEEEECCCCcHHHHHHHHHHHc--CCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 55 WALVTGPTDGIGKSFAFQLAKT--GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~--G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
+++||||+|+||++++++|+++ |++|++++|+.++.+ .+..+.+|++|. +.++++.+. .+
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-------------~~~~~~~D~~d~--~~~~~~~~~---~~ 62 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-------------GIKFITLDVSNR--DEIDRAVEK---YS 62 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-------------TCCEEECCTTCH--HHHHHHHHH---TT
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-------------CceEEEecCCCH--HHHHHHHhh---cC
Confidence 3899999999999999999998 899999998764321 245678999875 444444443 25
Q ss_pred eEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCC----------C
Q 020854 133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS----------D 202 (320)
Q Consensus 133 id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~----------~ 202 (320)
+|+|||+||.... ...++.+..+++|+.++.++++++.+ .+.+++|++||.+.+.... .
T Consensus 63 ~d~vih~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~ 131 (317)
T 3ajr_A 63 IDAIFHLAGILSA-------KGEKDPALAYKVNMNGTYNILEAAKQ----HRVEKVVIPSTIGVFGPETPKNKVPSITIT 131 (317)
T ss_dssp CCEEEECCCCCHH-------HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGCCTTSCSSSBCSSSCC
T ss_pred CcEEEECCcccCC-------ccccChHHHhhhhhHHHHHHHHHHHH----cCCCEEEEecCHHHhCCCCCCCCccccccC
Confidence 6799999997432 12344677899999999999998754 3567999999988765210 0
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccce
Q 020854 203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYV 241 (320)
Q Consensus 203 ~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v 241 (320)
.....|+.||.+.+.+++.++.+. |++++.+.|+.+
T Consensus 132 ~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~~ 167 (317)
T 3ajr_A 132 RPRTMFGVTKIAAELLGQYYYEKF---GLDVRSLRYPGI 167 (317)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEE
T ss_pred CCCchHHHHHHHHHHHHHHHHHhc---CCeEEEEecCcE
Confidence 135789999999999999887664 799999985444
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.70 E-value=4.9e-16 Score=140.00 Aligned_cols=184 Identities=13% Similarity=0.025 Sum_probs=134.7
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
+++++||||+|+||++++++|+++|++|++++|+....+ +. .+..+.+|++ . +. +.+.+. +
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~------~~~~~~~Dl~-~--~~---~~~~~~--~ 62 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-----IN------DYEYRVSDYT-L--ED---LINQLN--D 62 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC----------------CCEEEECCCC-H--HH---HHHHTT--T
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-----CC------ceEEEEcccc-H--HH---HHHhhc--C
Confidence 478999999999999999999999999999999943322 11 4677888987 4 33 333344 4
Q ss_pred eEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC---------CCC
Q 020854 133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------SDP 203 (320)
Q Consensus 133 id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~---------~~~ 203 (320)
+|+|||+||..... +.+..+++|+.++.++++++.. .+.+++|++||...+..+ +..
T Consensus 63 ~d~Vih~a~~~~~~----------~~~~~~~~n~~~~~~ll~a~~~----~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~ 128 (311)
T 3m2p_A 63 VDAVVHLAATRGSQ----------GKISEFHDNEILTQNLYDACYE----NNISNIVYASTISAYSDETSLPWNEKELPL 128 (311)
T ss_dssp CSEEEECCCCCCSS----------SCGGGTHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGCCCGGGCSBCTTSCCC
T ss_pred CCEEEEccccCCCC----------ChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEccHHHhCCCCCCCCCCCCCCC
Confidence 66999999976531 2245678999999999888743 456789999997665311 011
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc--------------cc--------cCCCCCCCHHHH
Q 020854 204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS--------------IK--------RSSFFVPSTDVY 261 (320)
Q Consensus 204 ~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~--------------~~--------~~~~~~~~~~~~ 261 (320)
....|+.+|.+.+.+++.++.+ .|++++.+.||.+-.+... .. .........+++
T Consensus 129 p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dv 205 (311)
T 3m2p_A 129 PDLMYGVSKLACEHIGNIYSRK---KGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDA 205 (311)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHH---SCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHH
Confidence 2468999999999999998875 5899999999998776432 00 001124578899
Q ss_pred HHHHHHHhCCC
Q 020854 262 ARAAMRWIGYE 272 (320)
Q Consensus 262 a~~i~~~l~~~ 272 (320)
|+.++..+..+
T Consensus 206 a~a~~~~~~~~ 216 (311)
T 3m2p_A 206 AKSVIYALKQE 216 (311)
T ss_dssp HHHHHHHTTCT
T ss_pred HHHHHHHHhcC
Confidence 99999998765
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.70 E-value=4.1e-16 Score=149.06 Aligned_cols=172 Identities=15% Similarity=0.128 Sum_probs=124.8
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHhhcC--------------CceEEEEEEe
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKT---GLNLVLVGRNPDKLKDVSDSIQAKYA--------------KTQIKSVVVD 112 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~---G~~Vil~~r~~~~~~~~~~~l~~~~~--------------~~~~~~~~~D 112 (320)
...+++|+||||+|+||.+++++|+++ |++|++++|+.+.... .+.+.+... ..++.++.+|
T Consensus 70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D 148 (478)
T 4dqv_A 70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDA-RRRLEKTFDSGDPELLRHFKELAADRLEVVAGD 148 (478)
T ss_dssp CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHH-HHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHH-HHHHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence 356899999999999999999999999 8999999998765322 222222211 2578999999
Q ss_pred CCCCc----HHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEE
Q 020854 113 FSGDL----DEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAI 188 (320)
Q Consensus 113 ~~~~~----~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~I 188 (320)
+++.. .+.++++. . ++|+||||||.... . .+++.+++|+.|+.++++.+.. .+.+++
T Consensus 149 l~~~~~gld~~~~~~~~---~--~~D~Vih~Aa~~~~--~--------~~~~~~~~Nv~gt~~ll~aa~~----~~~~~~ 209 (478)
T 4dqv_A 149 KSEPDLGLDQPMWRRLA---E--TVDLIVDSAAMVNA--F--------PYHELFGPNVAGTAELIRIALT----TKLKPF 209 (478)
T ss_dssp TTSGGGGCCHHHHHHHH---H--HCCEEEECCSSCSB--S--------SCCEEHHHHHHHHHHHHHHHTS----SSCCCE
T ss_pred CCCcccCCCHHHHHHHH---c--CCCEEEECccccCC--c--------CHHHHHHHHHHHHHHHHHHHHh----CCCCeE
Confidence 98641 23334333 3 35699999997542 1 1245678999999999998754 345689
Q ss_pred EEEcCccccccCCC--------------------CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecC
Q 020854 189 VNIGSGAAIVIPSD--------------------PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATK 244 (320)
Q Consensus 189 v~vsS~~~~~~~~~--------------------~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~ 244 (320)
|++||.+....... .....|+.||.+.+.+++.++.+. |++++++.||.|-.+
T Consensus 210 V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ivRpg~v~G~ 282 (478)
T 4dqv_A 210 TYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---ALPVAVFRCGMILAD 282 (478)
T ss_dssp EEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECC
T ss_pred EEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---CCCeEEEECceeeCC
Confidence 99999765431000 001349999999999999988764 899999999999654
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.69 E-value=3.5e-16 Score=155.30 Aligned_cols=194 Identities=14% Similarity=0.094 Sum_probs=140.6
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKT-GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~-G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
.++++|+||||+|+||.+++++|+++ |++|++++|+.++.++.. ....+..+.+|++|.. +.++++.+
T Consensus 313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~-------~~~~v~~v~~Dl~d~~-~~~~~~~~--- 381 (660)
T 1z7e_A 313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDISIHS-EWIEYHVK--- 381 (660)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT-------TCTTEEEEECCTTTCH-HHHHHHHH---
T ss_pred ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc-------cCCceEEEECCCCCcH-HHHHHhhc---
Confidence 46889999999999999999999998 899999999876543211 1346788999999861 22333332
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCC-------
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD------- 202 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~------- 202 (320)
++|+|||+||.... . ...++.+..+++|+.|+.++++++.. .+ +++|++||...+.....
T Consensus 382 --~~D~Vih~Aa~~~~--~----~~~~~~~~~~~~Nv~gt~~ll~aa~~----~~-~r~V~~SS~~vyg~~~~~~~~E~~ 448 (660)
T 1z7e_A 382 --KCDVVLPLVAIATP--I----EYTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEVYGMCSDKYFDEDH 448 (660)
T ss_dssp --HCSEEEECCCCCCT--H----HHHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGGGBTCCSSSBCTTT
T ss_pred --CCCEEEECceecCc--c----ccccCHHHHHHhhhHHHHHHHHHHHH----hC-CEEEEEecHHHcCCCCCcccCCCc
Confidence 35699999997542 1 11234577889999999999988765 34 79999999876531100
Q ss_pred ---------CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc---------------------cc--
Q 020854 203 ---------PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI---------------------KR-- 250 (320)
Q Consensus 203 ---------~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~---------------------~~-- 250 (320)
.....|+.||.+.+.+++.++.+. |++++++.||.+.++.... ..
T Consensus 449 ~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 525 (660)
T 1z7e_A 449 SNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPI 525 (660)
T ss_dssp CCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCE
T ss_pred cccccCcccCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCc
Confidence 123479999999999999998775 8999999999997765310 00
Q ss_pred -------CCCCCCCHHHHHHHHHHHhCC
Q 020854 251 -------SSFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 251 -------~~~~~~~~~~~a~~i~~~l~~ 271 (320)
........+++|+.++..+..
T Consensus 526 ~~~g~g~~~~~~i~v~Dva~ai~~~l~~ 553 (660)
T 1z7e_A 526 KLIDGGKQKRCFTDIRDGIEALYRIIEN 553 (660)
T ss_dssp EEEGGGCCEEECEEHHHHHHHHHHHHHC
T ss_pred EEeCCCCeEEEEEEHHHHHHHHHHHHhC
Confidence 001245689999999888754
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.68 E-value=1.9e-16 Score=141.27 Aligned_cols=174 Identities=17% Similarity=0.118 Sum_probs=125.3
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
..++++||||+|+||++++++|+++|++|++++|+ .+|++|. +.++++.+..
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~Dl~d~--~~~~~~~~~~--- 62 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-----------------------DLDITNV--LAVNKFFNEK--- 62 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT-----------------------TCCTTCH--HHHHHHHHHH---
T ss_pred ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc-----------------------cCCCCCH--HHHHHHHHhc---
Confidence 46899999999999999999999999999999996 2577765 4444444433
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCC---------C
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS---------D 202 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~---------~ 202 (320)
++|+|||+||.... +.+.+++++.+++|+.++.++++++.+. + .+||++||.+.+.... .
T Consensus 63 ~~d~vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~l~~a~~~~----~-~~iv~~SS~~v~~~~~~~~~~E~~~~ 131 (292)
T 1vl0_A 63 KPNVVINCAAHTAV------DKCEEQYDLAYKINAIGPKNLAAAAYSV----G-AEIVQISTDYVFDGEAKEPITEFDEV 131 (292)
T ss_dssp CCSEEEECCCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGSCSCCSSCBCTTSCC
T ss_pred CCCEEEECCccCCH------HHHhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEechHHeECCCCCCCCCCCCCC
Confidence 46699999996532 1234567889999999999999998762 3 3999999987654211 0
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecC---CCc--------cc------cCCCCCCCHHHHHHHH
Q 020854 203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATK---MAS--------IK------RSSFFVPSTDVYARAA 265 (320)
Q Consensus 203 ~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~---~~~--------~~------~~~~~~~~~~~~a~~i 265 (320)
.....|+.||++.+.+++.++. .+..+.|+.+-.+ +.. .. ........++++|+.+
T Consensus 132 ~~~~~Y~~sK~~~E~~~~~~~~-------~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 204 (292)
T 1vl0_A 132 NPQSAYGKTKLEGENFVKALNP-------KYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVV 204 (292)
T ss_dssp CCCSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEESSSSCHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHhhCC-------CeEEEeeeeeeCCCcChHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHH
Confidence 1356899999999999988643 4677777777644 111 00 0112245789999999
Q ss_pred HHHhCC
Q 020854 266 MRWIGY 271 (320)
Q Consensus 266 ~~~l~~ 271 (320)
+..+..
T Consensus 205 ~~~~~~ 210 (292)
T 1vl0_A 205 LKVIDE 210 (292)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 888754
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.67 E-value=3.5e-16 Score=140.46 Aligned_cols=190 Identities=15% Similarity=0.094 Sum_probs=131.7
Q ss_pred EEEEECCCCcHHHHHHHHHHHcC-CeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCe
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV 133 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G-~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 133 (320)
+++||||+|+||++++++|+++| ++|++++|+..... .+.+. +.. +.+|++|. +.++.+.+.....++
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~----~~~---~~~d~~~~--~~~~~~~~~~~~~~~ 69 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV----DLN---IADYMDKE--DFLIQIMAGEEFGDV 69 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHH----TSC---CSEEEEHH--HHHHHHHTTCCCSSC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcC----cce---eccccccH--HHHHHHHhccccCCC
Confidence 38999999999999999999999 89999999765421 11121 112 55677654 344444331100147
Q ss_pred EEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCC---------CC
Q 020854 134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD---------PL 204 (320)
Q Consensus 134 d~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~---------~~ 204 (320)
|+|||+||.... +.++.+..+++|+.++.++++++.+. +. ++|++||.+.+..... ..
T Consensus 70 d~vi~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~a~~~~----~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p 136 (310)
T 1eq2_A 70 EAIFHEGACSST--------TEWDGKYMMDNNYQYSKELLHYCLER----EI-PFLYASSAATYGGRTSDFIESREYEKP 136 (310)
T ss_dssp CEEEECCSCCCT--------TCCCHHHHHHHTHHHHHHHHHHHHHH----TC-CEEEEEEGGGGTTCCSCBCSSGGGCCC
T ss_pred cEEEECcccccC--------cccCHHHHHHHHHHHHHHHHHHHHHc----CC-eEEEEeeHHHhCCCCCCCCCCCCCCCC
Confidence 799999997542 12235778899999999999998653 34 8999999876542110 12
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc------------------ccc--------C-CCCCCC
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS------------------IKR--------S-SFFVPS 257 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~------------------~~~--------~-~~~~~~ 257 (320)
...|+.||.+.+.+++.++.+ .|++++.+.||.+-++... ... . ......
T Consensus 137 ~~~Y~~sK~~~e~~~~~~~~~---~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~ 213 (310)
T 1eq2_A 137 LNVYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVY 213 (310)
T ss_dssp SSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEE
T ss_pred CChhHHHHHHHHHHHHHHHHH---cCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEE
Confidence 467999999999999998765 4899999999999876532 000 0 112356
Q ss_pred HHHHHHHHHHHhCC
Q 020854 258 TDVYARAAMRWIGY 271 (320)
Q Consensus 258 ~~~~a~~i~~~l~~ 271 (320)
.+++|+.++..+..
T Consensus 214 v~Dva~~~~~~~~~ 227 (310)
T 1eq2_A 214 VGDVADVNLWFLEN 227 (310)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 78899999888754
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.67 E-value=3.2e-16 Score=139.44 Aligned_cols=172 Identities=13% Similarity=0.106 Sum_probs=126.0
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeE
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG 134 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 134 (320)
+++||||+|+||++++++|+++|++|++++|. ++|++|. +.++++.+.. ++|
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~D~~d~--~~~~~~~~~~---~~d 58 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK-----------------------LLDITNI--SQVQQVVQEI---RPH 58 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT-----------------------TSCTTCH--HHHHHHHHHH---CCS
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc-----------------------ccCCCCH--HHHHHHHHhc---CCC
Confidence 79999999999999999999999999999992 2577665 4444444433 466
Q ss_pred EEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC---------CCCCc
Q 020854 135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------SDPLY 205 (320)
Q Consensus 135 ~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~---------~~~~~ 205 (320)
+|||+||.... +...++.+..+++|+.++.++++++.+. +.++|++||...+..+ +....
T Consensus 59 ~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~v~~SS~~vy~~~~~~~~~E~~~~~p~ 127 (287)
T 3sc6_A 59 IIIHCAAYTKV------DQAEKERDLAYVINAIGARNVAVASQLV-----GAKLVYISTDYVFQGDRPEGYDEFHNPAPI 127 (287)
T ss_dssp EEEECCCCCCH------HHHTTCHHHHHHHHTHHHHHHHHHHHHH-----TCEEEEEEEGGGSCCCCSSCBCTTSCCCCC
T ss_pred EEEECCcccCh------HHHhcCHHHHHHHHHHHHHHHHHHHHHc-----CCeEEEEchhhhcCCCCCCCCCCCCCCCCC
Confidence 99999997642 1112345788999999999999998653 2479999998765421 11225
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc------------------ccCCCCCCCHHHHHHHHHH
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI------------------KRSSFFVPSTDVYARAAMR 267 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~------------------~~~~~~~~~~~~~a~~i~~ 267 (320)
..|+.+|.+.+.+++.++. ++..+.||.+-.+.... .........++++|+.++.
T Consensus 128 ~~Y~~sK~~~E~~~~~~~~-------~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~ 200 (287)
T 3sc6_A 128 NIYGASKYAGEQFVKELHN-------KYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINK 200 (287)
T ss_dssp SHHHHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhCC-------CcEEEeeeeecCCCCCcHHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHH
Confidence 6899999999999887643 46788999887663220 0011224569999999999
Q ss_pred HhCCC
Q 020854 268 WIGYE 272 (320)
Q Consensus 268 ~l~~~ 272 (320)
.+..+
T Consensus 201 ~~~~~ 205 (287)
T 3sc6_A 201 LIHTS 205 (287)
T ss_dssp HHTSC
T ss_pred HHhCC
Confidence 99865
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.66 E-value=3.2e-17 Score=147.94 Aligned_cols=191 Identities=12% Similarity=-0.016 Sum_probs=126.1
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
+++++|+||||||+||.+++++|+++|++|++++|+........+.+........+..+.+|+ .
T Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl---------------~- 68 (321)
T 3vps_A 5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDL---------------S- 68 (321)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHH---------------T-
T ss_pred cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCcc---------------c-
Confidence 457899999999999999999999999999999998652000000000000001111111111 1
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC---------C
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------S 201 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~---------~ 201 (320)
++|+|||+||.... ....+ + ....++ |+.++.++++++... +.+++|++||...+..+ +
T Consensus 69 -~~d~vi~~a~~~~~--~~~~~-~---~~~~~~-n~~~~~~ll~a~~~~----~v~~~v~~SS~~v~~~~~~~~~~E~~~ 136 (321)
T 3vps_A 69 -DVRLVYHLASHKSV--PRSFK-Q---PLDYLD-NVDSGRHLLALCTSV----GVPKVVVGSTCEVYGQADTLPTPEDSP 136 (321)
T ss_dssp -TEEEEEECCCCCCH--HHHTT-S---TTTTHH-HHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCSCSSSSBCTTSC
T ss_pred -cCCEEEECCccCCh--HHHHh-C---HHHHHH-HHHHHHHHHHHHHHc----CCCeEEEecCHHHhCCCCCCCCCCCCC
Confidence 68899999997642 11111 1 123456 999999999887543 35799999998765421 1
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHccCCc-eEEEEeccceecCCCcc--------------c--------cCCCCCCCH
Q 020854 202 DPLYSVYAATKAYIDQFSRSLYVEYRKSGI-DVQCQVPLYVATKMASI--------------K--------RSSFFVPST 258 (320)
Q Consensus 202 ~~~~~~Y~asKaal~~~~~~l~~el~~~gi-~v~~v~PG~v~T~~~~~--------------~--------~~~~~~~~~ 258 (320)
......|+.||.+.+.+++.++.+ .|+ +++.+.||.+-.+.... . .........
T Consensus 137 ~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v 213 (321)
T 3vps_A 137 LSPRSPYAASKVGLEMVAGAHQRA---SVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYI 213 (321)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHS---SSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEH
T ss_pred CCCCChhHHHHHHHHHHHHHHHHH---cCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEH
Confidence 112568999999999999998876 588 99999999998765320 0 011124578
Q ss_pred HHHHHHHHHHhCCC
Q 020854 259 DVYARAAMRWIGYE 272 (320)
Q Consensus 259 ~~~a~~i~~~l~~~ 272 (320)
+++|+.++..+..+
T Consensus 214 ~Dva~~~~~~~~~~ 227 (321)
T 3vps_A 214 TDVVDKLVALANRP 227 (321)
T ss_dssp HHHHHHHHHGGGSC
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999988765
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.66 E-value=3.3e-16 Score=140.68 Aligned_cols=161 Identities=17% Similarity=0.110 Sum_probs=114.7
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
+.+++++|+||||+|+||++++++|+++|+ +... ....+..+.+|++|. +.++++.+.
T Consensus 2 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~-------------~~~~~~~~~~D~~d~--~~~~~~~~~- 59 (319)
T 4b8w_A 2 LYFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGE-------------DWVFVSSKDADLTDT--AQTRALFEK- 59 (319)
T ss_dssp CCCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTC-------------EEEECCTTTCCTTSH--HHHHHHHHH-
T ss_pred ccccCCeEEEECCCcHHHHHHHHHHHhcCC------cccc-------------cccccCceecccCCH--HHHHHHHhh-
Confidence 345689999999999999999999999998 1100 011233346788765 444444443
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccccc---------
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI--------- 199 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~--------- 199 (320)
.++|+|||+||.... . ..+.++....+++|+.|+.++++++.. .+.+++|++||.+.+..
T Consensus 60 --~~~d~Vih~A~~~~~--~---~~~~~~~~~~~~~nv~gt~~ll~a~~~----~~~~~~v~~SS~~vyg~~~~~~~~E~ 128 (319)
T 4b8w_A 60 --VQPTHVIHLAAMVGG--L---FRNIKYNLDFWRKNVHMNDNVLHSAFE----VGARKVVSCLSTCIFPDKTTYPIDET 128 (319)
T ss_dssp --SCCSEEEECCCCCCC--H---HHHTTCHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEECCGGGSCSSCCSSBCGG
T ss_pred --cCCCEEEECceeccc--c---cccccCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEEcchhhcCCCCCCCcccc
Confidence 357799999997532 0 111223466789999999999998744 44569999999876431
Q ss_pred -----CCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCC
Q 020854 200 -----PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKM 245 (320)
Q Consensus 200 -----~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~ 245 (320)
++.|....|+.||.+.+.+++.++.+. |+++..+.|+.+-.|-
T Consensus 129 ~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~Gp~ 176 (319)
T 4b8w_A 129 MIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQY---GCTFTAVIPTNVFGPH 176 (319)
T ss_dssp GGGBSCCCSSSHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTT
T ss_pred ccccCCCCCCcchHHHHHHHHHHHHHHHHHhh---CCCEEEEeeccccCCC
Confidence 122333469999999999999988774 7999999999987664
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.65 E-value=2.4e-15 Score=133.70 Aligned_cols=172 Identities=18% Similarity=0.124 Sum_probs=126.8
Q ss_pred CEEEEECCCCcHHHHHHHHHHHc--CCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKT--GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~--G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
|+++||||||+||++++++|+++ |++|++++|+.++.++.. . ..+..+.+|++|. + .+.+.+.+
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~----~----~~~~~~~~D~~d~--~---~l~~~~~~- 66 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----D----QGVEVRHGDYNQP--E---SLQKAFAG- 66 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH----H----TTCEEEECCTTCH--H---HHHHHTTT-
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh----h----cCCeEEEeccCCH--H---HHHHHHhc-
Confidence 46999999999999999999998 999999999887654322 1 2367788999875 3 33344443
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHHH
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAAT 211 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~as 211 (320)
+|+|||+||... .. ++|+.++.++++++. +.+.++||++||..... .+ ..|+.+
T Consensus 67 -~d~vi~~a~~~~---------~~-------~~n~~~~~~l~~a~~----~~~~~~~v~~Ss~~~~~---~~--~~y~~~ 120 (287)
T 2jl1_A 67 -VSKLLFISGPHY---------DN-------TLLIVQHANVVKAAR----DAGVKHIAYTGYAFAEE---SI--IPLAHV 120 (287)
T ss_dssp -CSEEEECCCCCS---------CH-------HHHHHHHHHHHHHHH----HTTCSEEEEEEETTGGG---CC--STHHHH
T ss_pred -CCEEEEcCCCCc---------Cc-------hHHHHHHHHHHHHHH----HcCCCEEEEECCCCCCC---CC--CchHHH
Confidence 569999998521 11 578888888888764 34567999999987753 12 379999
Q ss_pred HHHHHHHHHHHHHHHccCCceEEEEeccceecCC-Cc--------c------ccCCCCCCCHHHHHHHHHHHhCCC
Q 020854 212 KAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKM-AS--------I------KRSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 212 Kaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~-~~--------~------~~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
|.+.+.+.+. .|++++.+.||.+.++. .. . .........++++|+.++..+..+
T Consensus 121 K~~~E~~~~~-------~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~ 189 (287)
T 2jl1_A 121 HLATEYAIRT-------TNIPYTFLRNALYTDFFVNEGLRASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEE 189 (287)
T ss_dssp HHHHHHHHHH-------TTCCEEEEEECCBHHHHSSGGGHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHH-------cCCCeEEEECCEeccccchhhHHHHhhCCceeccCCCCccCccCHHHHHHHHHHHhcCC
Confidence 9999988753 58999999999886654 11 0 011123578999999999988653
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.63 E-value=2.7e-15 Score=144.44 Aligned_cols=194 Identities=15% Similarity=0.085 Sum_probs=136.0
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHH---HHHHHHHHHhh-------cCCceEEEEEEeCCCCcHHHHH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK---LKDVSDSIQAK-------YAKTQIKSVVVDFSGDLDEGVE 122 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~---~~~~~~~l~~~-------~~~~~~~~~~~D~~~~~~~~~~ 122 (320)
.++|+||||||+||.+++++|.+.|++|++++|+..+ .+...+.+... ....++.++.+|+++. +.+.
T Consensus 150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~--~~l~ 227 (508)
T 4f6l_B 150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECM--DDVV 227 (508)
T ss_dssp CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBC--SSCC
T ss_pred CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCccc--ccCC
Confidence 5899999999999999999999999999999998763 33333333221 1145789999999984 1111
Q ss_pred HHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccc--ccc-
Q 020854 123 RIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAA--IVI- 199 (320)
Q Consensus 123 ~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~--~~~- 199 (320)
.. .++|+||||||.... ....+..+++|+.|+.++++.+.. +.+++|++||... ...
T Consensus 228 ----~~--~~~D~Vih~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~~-----~~~~~v~iSS~~vG~~~~~ 287 (508)
T 4f6l_B 228 ----LP--ENMDTIIHAGARTDH---------FGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISVGTYFDI 287 (508)
T ss_dssp ----CS--SCCSEEEECCCC-----------------CCHHHHHHHHHHHHHHHHT-----TTCEEEEEEESCTTSEECT
T ss_pred ----Cc--cCCCEEEECCceecC---------CCCHHHHhhhHHHHHHHHHHHHHh-----CCCcEEEeCChhhccCCcc
Confidence 22 257799999997531 123466778999999999998754 4578999999877 100
Q ss_pred -----------C--CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc-----------------
Q 020854 200 -----------P--SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK----------------- 249 (320)
Q Consensus 200 -----------~--~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~----------------- 249 (320)
+ +......|+.||.+.+.+++.++. .|++++.+.||.|-.+.....
T Consensus 288 ~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~ 363 (508)
T 4f6l_B 288 DTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDL 363 (508)
T ss_dssp TCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHH
T ss_pred CCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHH
Confidence 0 011357899999999999887653 599999999999866532110
Q ss_pred -----------cCCCCCCCHHHHHHHHHHHhCCC
Q 020854 250 -----------RSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 250 -----------~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
.....+...+++|+.++..+..+
T Consensus 364 ~~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~ 397 (508)
T 4f6l_B 364 LQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVN 397 (508)
T ss_dssp TTCSEEETTGGGSEEECEEHHHHHHHHHHHTTBC
T ss_pred HHcCCCCCCccCceEEEEcHHHHHHHHHHHHhCC
Confidence 00112456899999999988654
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=1.4e-15 Score=136.01 Aligned_cols=173 Identities=14% Similarity=0.085 Sum_probs=123.4
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeE
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG 134 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 134 (320)
+++||||+|+||++++++|+ +|++|++++|+.. .+.+|++|. +.++++.+.. ++|
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-------------------~~~~D~~d~--~~~~~~~~~~---~~d 56 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-------------------EFCGDFSNP--KGVAETVRKL---RPD 56 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-------------------SSCCCTTCH--HHHHHHHHHH---CCS
T ss_pred eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-------------------cccccCCCH--HHHHHHHHhc---CCC
Confidence 69999999999999999999 8999999999861 245788765 4444444332 466
Q ss_pred EEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCC---------CCCc
Q 020854 135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS---------DPLY 205 (320)
Q Consensus 135 ~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~---------~~~~ 205 (320)
+|||+||.... . .+.++.+..+++|+.++.++++++.. .+ .++|++||...+.... ....
T Consensus 57 ~vih~a~~~~~--~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~ 125 (299)
T 1n2s_A 57 VIVNAAAHTAV--D----KAESEPELAQLLNATSVEAIAKAANE----TG-AWVVHYSTDYVFPGTGDIPWQETDATSPL 125 (299)
T ss_dssp EEEECCCCCCH--H----HHTTCHHHHHHHHTHHHHHHHHHHTT----TT-CEEEEEEEGGGSCCCTTCCBCTTSCCCCS
T ss_pred EEEECcccCCH--h----hhhcCHHHHHHHHHHHHHHHHHHHHH----cC-CcEEEEecccEEeCCCCCCCCCCCCCCCc
Confidence 99999997542 1 11223567889999999999998743 22 4899999987654210 1124
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc-----------cc-------CCCCCCCHHHHHHHHHH
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI-----------KR-------SSFFVPSTDVYARAAMR 267 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~-----------~~-------~~~~~~~~~~~a~~i~~ 267 (320)
..|+.+|.+.+.+++.++. +++.+.||.+.++.... .. ........+++|+.++.
T Consensus 126 ~~Y~~sK~~~E~~~~~~~~-------~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~ 198 (299)
T 1n2s_A 126 NVYGKTKLAGEKALQDNCP-------KHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAH 198 (299)
T ss_dssp SHHHHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhCC-------CeEEEeeeeecCCCcCcHHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHH
Confidence 6899999999999877642 78999999998764320 00 01123458999998888
Q ss_pred HhC
Q 020854 268 WIG 270 (320)
Q Consensus 268 ~l~ 270 (320)
.+.
T Consensus 199 ~~~ 201 (299)
T 1n2s_A 199 AIR 201 (299)
T ss_dssp HHH
T ss_pred HHH
Confidence 774
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=6.5e-15 Score=130.68 Aligned_cols=168 Identities=20% Similarity=0.142 Sum_probs=117.8
Q ss_pred EEEEECCCCcHHHHHHHHHHHc--CCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 55 WALVTGPTDGIGKSFAFQLAKT--GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~--G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
+++||||||+||++++++|+++ |++|++++|+.++.+... . ..+..+.+|++|. + .+.+.+.+
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~----~----~~~~~~~~D~~d~--~---~~~~~~~~-- 65 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA----A----QGITVRQADYGDE--A---ALTSALQG-- 65 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH----H----TTCEEEECCTTCH--H---HHHHHTTT--
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh----c----CCCeEEEcCCCCH--H---HHHHHHhC--
Confidence 3899999999999999999998 999999999977654322 1 2367788999875 3 33444444
Q ss_pred eEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHHHH
Q 020854 133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATK 212 (320)
Q Consensus 133 id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asK 212 (320)
+|+|||+||... ..|+.++.++++++ .+.+.++||++||..... . ...|+.+|
T Consensus 66 ~d~vi~~a~~~~------------------~~~~~~~~~l~~a~----~~~~~~~~v~~Ss~~~~~---~--~~~y~~sK 118 (286)
T 2zcu_A 66 VEKLLLISSSEV------------------GQRAPQHRNVINAA----KAAGVKFIAYTSLLHADT---S--PLGLADEH 118 (286)
T ss_dssp CSEEEECC--------------------------CHHHHHHHHH----HHHTCCEEEEEEETTTTT---C--CSTTHHHH
T ss_pred CCEEEEeCCCCc------------------hHHHHHHHHHHHHH----HHcCCCEEEEECCCCCCC---C--cchhHHHH
Confidence 569999998521 02555555555554 444567999999987753 1 24799999
Q ss_pred HHHHHHHHHHHHHHccCCceEEEEeccceecCCCc--------c------ccCCCCCCCHHHHHHHHHHHhCC
Q 020854 213 AYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS--------I------KRSSFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 213 aal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~--------~------~~~~~~~~~~~~~a~~i~~~l~~ 271 (320)
.+.+.+.+. .|++++.+.||++.+++.. . .........++++|+.++..+..
T Consensus 119 ~~~e~~~~~-------~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~ 184 (286)
T 2zcu_A 119 IETEKMLAD-------SGIVYTLLRNGWYSENYLASAPAALEHGVFIGAAGDGKIASATRADYAAAAARVISE 184 (286)
T ss_dssp HHHHHHHHH-------HCSEEEEEEECCBHHHHHTTHHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHH-------cCCCeEEEeChHHhhhhHHHhHHhhcCCceeccCCCCccccccHHHHHHHHHHHhcC
Confidence 999988753 4899999999988665321 0 01123357899999999988864
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.57 E-value=1.7e-14 Score=129.12 Aligned_cols=181 Identities=14% Similarity=0.084 Sum_probs=121.2
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcC-CeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G-~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
+|+++||||||+||++++++|+++| ++|++++|+.++... +.+.. ..+..+.+|++|. + .+.+.+.+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~----~~~~~~~~D~~d~--~---~l~~~~~~- 72 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL----QGAEVVQGDQDDQ--V---IMELALNG- 72 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH----TTCEEEECCTTCH--H---HHHHHHTT-
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH----CCCEEEEecCCCH--H---HHHHHHhc-
Confidence 5789999999999999999999999 999999999765431 22322 2367788999875 3 33444444
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHHH
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAAT 211 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~as 211 (320)
+|+||||+|.... .. .+.|+.+...+ ++.+.+.+.++||++||......+.......|+.+
T Consensus 73 -~d~vi~~a~~~~~-------~~-------~~~~~~~~~~~----~~aa~~~gv~~iv~~S~~~~~~~~~~~~~~~y~~s 133 (299)
T 2wm3_A 73 -AYATFIVTNYWES-------CS-------QEQEVKQGKLL----ADLARRLGLHYVVYSGLENIKKLTAGRLAAAHFDG 133 (299)
T ss_dssp -CSEEEECCCHHHH-------TC-------HHHHHHHHHHH----HHHHHHHTCSEEEECCCCCHHHHTTTSCCCHHHHH
T ss_pred -CCEEEEeCCCCcc-------cc-------chHHHHHHHHH----HHHHHHcCCCEEEEEcCccccccCCCcccCchhhH
Confidence 5599999985321 01 13444444444 44455556789999666443221111224679999
Q ss_pred HHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc-----ccCC-------------CCCCCHHHHHHHHHHHhCC
Q 020854 212 KAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI-----KRSS-------------FFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 212 Kaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~-----~~~~-------------~~~~~~~~~a~~i~~~l~~ 271 (320)
|.+++.+.+. .|++++.+.||++.+++... .... ..+.+++++|+.++..+..
T Consensus 134 K~~~e~~~~~-------~gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~ 204 (299)
T 2wm3_A 134 KGEVEEYFRD-------IGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKM 204 (299)
T ss_dssp HHHHHHHHHH-------HTCCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHS
T ss_pred HHHHHHHHHH-------CCCCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcC
Confidence 9999988764 38999999999988775321 0000 0134788999988887754
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=5.2e-14 Score=129.28 Aligned_cols=176 Identities=12% Similarity=0.030 Sum_probs=120.1
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEe-CCCCcHHHHHHHHHHHcCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD-FSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D-~~~~~~~~~~~~~~~~~~~ 131 (320)
+++++||||||+||++++++|+++|++|++++|+.++.. .+.+.. ...+..+.+| ++|. +. +.+.+.+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~---~~~v~~v~~D~l~d~--~~---l~~~~~~- 73 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA---IPNVTLFQGPLLNNV--PL---MDTLFEG- 73 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT---STTEEEEESCCTTCH--HH---HHHHHTT-
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh---cCCcEEEECCccCCH--HH---HHHHHhc-
Confidence 678999999999999999999999999999999876642 123322 2357788999 8875 33 3334444
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCcc-ccccCCCCCchhhH
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGA-AIVIPSDPLYSVYA 209 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~-~~~~~~~~~~~~Y~ 209 (320)
+|+||||++.... +.|..+ .+++++ +.+.+ .++||++||.. +.. +.+....|+
T Consensus 74 -~d~Vi~~a~~~~~-----------------~~~~~~-~~l~~a----a~~~g~v~~~V~~SS~~~~~~--~~~~~~~y~ 128 (352)
T 1xgk_A 74 -AHLAFINTTSQAG-----------------DEIAIG-KDLADA----AKRAGTIQHYIYSSMPDHSLY--GPWPAVPMW 128 (352)
T ss_dssp -CSEEEECCCSTTS-----------------CHHHHH-HHHHHH----HHHHSCCSEEEEEECCCGGGT--SSCCCCTTT
T ss_pred -CCEEEEcCCCCCc-----------------HHHHHH-HHHHHH----HHHcCCccEEEEeCCcccccc--CCCCCccHH
Confidence 4599999874310 124443 444444 44445 57999999987 333 223346799
Q ss_pred HHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc----------cc-------C-----CCCCCCH-HHHHHHHH
Q 020854 210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI----------KR-------S-----SFFVPST-DVYARAAM 266 (320)
Q Consensus 210 asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~----------~~-------~-----~~~~~~~-~~~a~~i~ 266 (320)
.||++.+.+++. .|+++++|.||++-++.... .. + ......+ +++|+.++
T Consensus 129 ~sK~~~E~~~~~-------~gi~~~ivrpg~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~ 201 (352)
T 1xgk_A 129 APKFTVENYVRQ-------LGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALL 201 (352)
T ss_dssp HHHHHHHHHHHT-------SSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-------cCCCEEEEecceecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHH
Confidence 999999998865 28999999999875543210 00 0 0113466 89999998
Q ss_pred HHhCC
Q 020854 267 RWIGY 271 (320)
Q Consensus 267 ~~l~~ 271 (320)
..+..
T Consensus 202 ~~l~~ 206 (352)
T 1xgk_A 202 QIFKD 206 (352)
T ss_dssp HHHHH
T ss_pred HHHhC
Confidence 87754
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.55 E-value=9.1e-14 Score=124.60 Aligned_cols=173 Identities=17% Similarity=0.169 Sum_probs=115.9
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH-------HHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP-------DKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIK 125 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~-------~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 125 (320)
+++++||||||+||++++++|+++|++|++++|+. ++.+.. +++.. ..+..+.+|++|. + .+.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~----~~v~~v~~D~~d~--~---~l~ 71 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQS----LGVILLEGDINDH--E---TLV 71 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHH----TTCEEEECCTTCH--H---HHH
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHh----CCCEEEEeCCCCH--H---HHH
Confidence 57899999999999999999999999999999986 444332 23322 2367888999875 3 344
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccc----cC
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIV----IP 200 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~----~~ 200 (320)
+.+.+ +|+|||+||... +.+..+++++ +.+.+ -+++| .|..+.. .+
T Consensus 72 ~~~~~--~d~vi~~a~~~~---------------------~~~~~~l~~a----a~~~g~v~~~v--~S~~g~~~~~~~~ 122 (307)
T 2gas_A 72 KAIKQ--VDIVICAAGRLL---------------------IEDQVKIIKA----IKEAGNVKKFF--PSEFGLDVDRHDA 122 (307)
T ss_dssp HHHTT--CSEEEECSSSSC---------------------GGGHHHHHHH----HHHHCCCSEEE--CSCCSSCTTSCCC
T ss_pred HHHhC--CCEEEECCcccc---------------------cccHHHHHHH----HHhcCCceEEe--ecccccCcccccC
Confidence 44444 569999998532 1122333343 34444 56787 3444421 11
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc-------------------cCCCCCCCHHHH
Q 020854 201 SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK-------------------RSSFFVPSTDVY 261 (320)
Q Consensus 201 ~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~-------------------~~~~~~~~~~~~ 261 (320)
..|....| .+|.+++.+.+. .|++++.+.||++.+++.... .......+++++
T Consensus 123 ~~p~~~~y-~sK~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv 194 (307)
T 2gas_A 123 VEPVRQVF-EEKASIRRVIEA-------EGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADV 194 (307)
T ss_dssp CTTHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHH
T ss_pred CCcchhHH-HHHHHHHHHHHH-------cCCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHH
Confidence 23445689 999999887753 379999999999887653210 001124589999
Q ss_pred HHHHHHHhCCC
Q 020854 262 ARAAMRWIGYE 272 (320)
Q Consensus 262 a~~i~~~l~~~ 272 (320)
|+.++..+..+
T Consensus 195 a~~~~~~l~~~ 205 (307)
T 2gas_A 195 GTFTIRAANDP 205 (307)
T ss_dssp HHHHHHHHTCG
T ss_pred HHHHHHHHcCc
Confidence 99999988654
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.53 E-value=6e-14 Score=124.83 Aligned_cols=172 Identities=16% Similarity=0.146 Sum_probs=115.7
Q ss_pred EEEEECCCCcHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCe
Q 020854 55 WALVTGPTDGIGKSFAFQLAKT-GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV 133 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~-G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 133 (320)
+++||||||+||++++++|.+. |++|++++|+.++..... ...+..+.+|++|. +.+.+.+.+ +
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~--------~~~v~~~~~D~~d~-----~~l~~~~~~--~ 66 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW--------RGKVSVRQLDYFNQ-----ESMVEAFKG--M 66 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG--------BTTBEEEECCTTCH-----HHHHHHTTT--C
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh--------hCCCEEEEcCCCCH-----HHHHHHHhC--C
Confidence 5899999999999999999998 999999999987643221 34578889999876 334444454 5
Q ss_pred EEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHHHHH
Q 020854 134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKA 213 (320)
Q Consensus 134 d~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKa 213 (320)
|+|||+||.... . ..|+.++.. +++.+++.+.++||++||..... ..+ |..++.
T Consensus 67 d~vi~~a~~~~~---------~-------~~~~~~~~~----l~~aa~~~gv~~iv~~Ss~~~~~--~~~----~~~~~~ 120 (289)
T 3e48_A 67 DTVVFIPSIIHP---------S-------FKRIPEVEN----LVYAAKQSGVAHIIFIGYYADQH--NNP----FHMSPY 120 (289)
T ss_dssp SEEEECCCCCCS---------H-------HHHHHHHHH----HHHHHHHTTCCEEEEEEESCCST--TCC----STTHHH
T ss_pred CEEEEeCCCCcc---------c-------hhhHHHHHH----HHHHHHHcCCCEEEEEcccCCCC--CCC----Cccchh
Confidence 699999986532 0 124555444 44445556678999999965533 222 222221
Q ss_pred HHHHHHHHHHHHHccCCceEEEEeccceecCCCcc----------ccC----CCCCCCHHHHHHHHHHHhCCC
Q 020854 214 YIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI----------KRS----SFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 214 al~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~----------~~~----~~~~~~~~~~a~~i~~~l~~~ 272 (320)
. ..+...++..|++++.+.||++.+++... ..+ ...+..++++|+.++..+..+
T Consensus 121 ~-----~~~e~~~~~~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~ 188 (289)
T 3e48_A 121 F-----GYASRLLSTSGIDYTYVRMAMYMDPLKPYLPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNP 188 (289)
T ss_dssp H-----HHHHHHHHHHCCEEEEEEECEESTTHHHHHHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCG
T ss_pred H-----HHHHHHHHHcCCCEEEEeccccccccHHHHHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCC
Confidence 1 12223344568999999999998876420 001 112568999999999888654
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.51 E-value=4.8e-13 Score=118.73 Aligned_cols=170 Identities=10% Similarity=0.010 Sum_probs=120.7
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
.++++|||| |.||.+++++|+++|++|++++|+.++.+...+ ..+..+.+|++|- + +. +
T Consensus 5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--------~~~~~~~~D~~d~--~--------~~--~ 63 (286)
T 3ius_A 5 TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA--------SGAEPLLWPGEEP--S--------LD--G 63 (286)
T ss_dssp CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH--------TTEEEEESSSSCC--C--------CT--T
T ss_pred cCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh--------CCCeEEEeccccc--c--------cC--C
Confidence 378999998 999999999999999999999999887654321 3478888999873 1 33 4
Q ss_pred eEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhc--CCCcEEEEEcCccccccC---------C
Q 020854 133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK--RKKGAIVNIGSGAAIVIP---------S 201 (320)
Q Consensus 133 id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~--~~~g~Iv~vsS~~~~~~~---------~ 201 (320)
+|+|||+||..... .. . ++.++..+.+ .+.+++|++||...+..+ +
T Consensus 64 ~d~vi~~a~~~~~~-------~~--~--------------~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~ 120 (286)
T 3ius_A 64 VTHLLISTAPDSGG-------DP--V--------------LAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTP 120 (286)
T ss_dssp CCEEEECCCCBTTB-------CH--H--------------HHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSC
T ss_pred CCEEEECCCccccc-------cH--H--------------HHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCC
Confidence 67999999975421 11 0 1233343444 345799999997654311 1
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc-------c-------ccCCCCCCCHHHHHHHHHH
Q 020854 202 DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS-------I-------KRSSFFVPSTDVYARAAMR 267 (320)
Q Consensus 202 ~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~-------~-------~~~~~~~~~~~~~a~~i~~ 267 (320)
......|+.+|.+.+.+.+.+ .|++++.+.||.+-.+... . ..........+++|+.++.
T Consensus 121 ~~p~~~Y~~sK~~~E~~~~~~------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~ 194 (286)
T 3ius_A 121 LTPTAARGRWRVMAEQQWQAV------PNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAA 194 (286)
T ss_dssp CCCCSHHHHHHHHHHHHHHHS------TTCCEEEEEECEEEBTTBSSSTTSSSSCCCEEECTTCCBCEEEHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHhh------cCCCEEEEeccceECCCchHHHHHhcCCccccCCCCcccceEEHHHHHHHHHH
Confidence 112357999999999988776 6899999999999766422 0 0111224567999999999
Q ss_pred HhCCC
Q 020854 268 WIGYE 272 (320)
Q Consensus 268 ~l~~~ 272 (320)
.+..+
T Consensus 195 ~~~~~ 199 (286)
T 3ius_A 195 SMARP 199 (286)
T ss_dssp HHHSC
T ss_pred HHhCC
Confidence 98765
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.51 E-value=2.1e-14 Score=127.71 Aligned_cols=176 Identities=12% Similarity=0.007 Sum_probs=124.3
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
+++++||| +|+||++++++|+++|++|++++|+.+++ ...+.++.+|++|. +.++++ +.. +
T Consensus 3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~------------~~~~~~~~~Dl~d~--~~~~~~---~~~-~ 63 (286)
T 3gpi_A 3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM------------PAGVQTLIADVTRP--DTLASI---VHL-R 63 (286)
T ss_dssp CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC------------CTTCCEEECCTTCG--GGCTTG---GGG-C
T ss_pred CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccCCceEEccCCCh--HHHHHh---hcC-C
Confidence 67899999 59999999999999999999999987652 24577889999875 222222 222 4
Q ss_pred eEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC---------CCC
Q 020854 133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------SDP 203 (320)
Q Consensus 133 id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~---------~~~ 203 (320)
+|+|||+||... .+.+..+++|+.++.++++++. +.+.+++|++||...+..+ +..
T Consensus 64 ~d~vih~a~~~~-----------~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~ 128 (286)
T 3gpi_A 64 PEILVYCVAASE-----------YSDEHYRLSYVEGLRNTLSALE----GAPLQHVFFVSSTGVYGQEVEEWLDEDTPPI 128 (286)
T ss_dssp CSEEEECHHHHH-----------HC-----CCSHHHHHHHHHHTT----TSCCCEEEEEEEGGGCCCCCSSEECTTSCCC
T ss_pred CCEEEEeCCCCC-----------CCHHHHHHHHHHHHHHHHHHHh----hCCCCEEEEEcccEEEcCCCCCCCCCCCCCC
Confidence 679999998532 2235667889999998888864 3456799999998764421 111
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc------c-------cCCCCCCCHHHHHHHHHHHhC
Q 020854 204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI------K-------RSSFFVPSTDVYARAAMRWIG 270 (320)
Q Consensus 204 ~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~------~-------~~~~~~~~~~~~a~~i~~~l~ 270 (320)
....|+.||.+.+.+ +.. ++++.+.||.+-.+.... . .........+++|+.++..+.
T Consensus 129 p~~~Y~~sK~~~E~~-~~~--------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~ 199 (286)
T 3gpi_A 129 AKDFSGKRMLEAEAL-LAA--------YSSTILRFSGIYGPGRLRMIRQAQTPEQWPARNAWTNRIHRDDGAAFIAYLIQ 199 (286)
T ss_dssp CCSHHHHHHHHHHHH-GGG--------SSEEEEEECEEEBTTBCHHHHHTTCGGGSCSSBCEECEEEHHHHHHHHHHHHH
T ss_pred CCChhhHHHHHHHHH-Hhc--------CCeEEEecccccCCCchhHHHHHHhcccCCCcCceeEEEEHHHHHHHHHHHHh
Confidence 256899999998887 432 889999999987765431 0 001124578899999988876
Q ss_pred C
Q 020854 271 Y 271 (320)
Q Consensus 271 ~ 271 (320)
.
T Consensus 200 ~ 200 (286)
T 3gpi_A 200 Q 200 (286)
T ss_dssp H
T ss_pred h
Confidence 5
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=4.1e-13 Score=122.70 Aligned_cols=176 Identities=13% Similarity=0.064 Sum_probs=120.7
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH----HHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP----DKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~----~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
+++|+||||||+||++++++|+++|++|++++|+. ++.+. .+++. ...+..+.+|++|. +.+.++.+.
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~-~~~l~----~~~v~~~~~Dl~d~--~~l~~~~~~- 81 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKI-FKALE----DKGAIIVYGLINEQ--EAMEKILKE- 81 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHH-HHHHH----HTTCEEEECCTTCH--HHHHHHHHH-
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHH-HHHHH----hCCcEEEEeecCCH--HHHHHHHhh-
Confidence 57899999999999999999999999999999976 33322 22332 23578889999875 444444332
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCcccccc---CCCCC
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVI---PSDPL 204 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~---~~~~~ 204 (320)
.++|+|||+||.. |+.++.++++++.. .+ -.++|. |+ .+... .+.+.
T Consensus 82 --~~~d~Vi~~a~~~---------------------n~~~~~~l~~aa~~----~g~v~~~v~-S~-~g~~~~e~~~~~p 132 (346)
T 3i6i_A 82 --HEIDIVVSTVGGE---------------------SILDQIALVKAMKA----VGTIKRFLP-SE-FGHDVNRADPVEP 132 (346)
T ss_dssp --TTCCEEEECCCGG---------------------GGGGHHHHHHHHHH----HCCCSEEEC-SC-CSSCTTTCCCCTT
T ss_pred --CCCCEEEECCchh---------------------hHHHHHHHHHHHHH----cCCceEEee-cc-cCCCCCccCcCCC
Confidence 2466999999852 66666667776543 33 456775 44 33220 11244
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc---------c----------cCCCCCCCHHHHHHHH
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI---------K----------RSSFFVPSTDVYARAA 265 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~---------~----------~~~~~~~~~~~~a~~i 265 (320)
...|+.+|.+++.+.+. .|++++.+.||++-...... . .....+...+++|+.+
T Consensus 133 ~~~y~~sK~~~e~~l~~-------~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~ 205 (346)
T 3i6i_A 133 GLNMYREKRRVRQLVEE-------SGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFT 205 (346)
T ss_dssp HHHHHHHHHHHHHHHHH-------TTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHH-------cCCCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHH
Confidence 57899999998877754 58999999999886654221 0 0012256889999999
Q ss_pred HHHhCCC
Q 020854 266 MRWIGYE 272 (320)
Q Consensus 266 ~~~l~~~ 272 (320)
+..+..+
T Consensus 206 ~~~l~~~ 212 (346)
T 3i6i_A 206 MKTVDDV 212 (346)
T ss_dssp HHHTTCG
T ss_pred HHHHhCc
Confidence 9998764
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.49 E-value=2.5e-13 Score=130.94 Aligned_cols=183 Identities=13% Similarity=0.023 Sum_probs=127.8
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
+++||||||||+||.+++++|+++|++|++++|+..+.+ .+.+|+.+... +.+. +
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~----------------~v~~d~~~~~~-------~~l~--~ 201 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG----------------KRFWDPLNPAS-------DLLD--G 201 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT----------------CEECCTTSCCT-------TTTT--T
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc----------------ceeecccchhH-------HhcC--C
Confidence 689999999999999999999999999999999876421 14567665421 1223 4
Q ss_pred eEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccc-cC--------CCC
Q 020854 133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV-IP--------SDP 203 (320)
Q Consensus 133 id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~-~~--------~~~ 203 (320)
+|+|||+||.... . ..+.+..+.++++|+.|+.++++++. .+.+.+++|++||...+. .+ ..+
T Consensus 202 ~D~Vih~A~~~~~--~---~~~~~~~~~~~~~Nv~gt~~ll~a~a---~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~ 273 (516)
T 3oh8_A 202 ADVLVHLAGEPIF--G---RFNDSHKEAIRESRVLPTKFLAELVA---ESTQCTTMISASAVGFYGHDRGDEILTEESES 273 (516)
T ss_dssp CSEEEECCCC----------CCGGGHHHHHHHTHHHHHHHHHHHH---HCSSCCEEEEEEEGGGGCSEEEEEEECTTSCC
T ss_pred CCEEEECCCCccc--c---ccchhHHHHHHHHHHHHHHHHHHHHH---hcCCCCEEEEeCcceEecCCCCCCccCCCCCC
Confidence 6699999997542 1 33445567889999999999999743 334567999999976543 00 011
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc-----------cc-------cCCCCCCCHHHHHHHH
Q 020854 204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS-----------IK-------RSSFFVPSTDVYARAA 265 (320)
Q Consensus 204 ~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~-----------~~-------~~~~~~~~~~~~a~~i 265 (320)
....|+.+|...+.+.+ +....|++++.+.||.+.++-.. .. .....+...+++|+.+
T Consensus 274 ~~~~y~~~~~~~E~~~~----~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai 349 (516)
T 3oh8_A 274 GDDFLAEVCRDWEHATA----PASDAGKRVAFIRTGVALSGRGGMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIY 349 (516)
T ss_dssp CSSHHHHHHHHHHHTTH----HHHHTTCEEEEEEECEEEBTTBSHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHH
T ss_pred CcChHHHHHHHHHHHHH----HHHhCCCCEEEEEeeEEECCCCChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHH
Confidence 34568888887765543 33457999999999999886421 00 0011245789999999
Q ss_pred HHHhCCC
Q 020854 266 MRWIGYE 272 (320)
Q Consensus 266 ~~~l~~~ 272 (320)
+..+..+
T Consensus 350 ~~~l~~~ 356 (516)
T 3oh8_A 350 YRAIVDA 356 (516)
T ss_dssp HHHHHCT
T ss_pred HHHHhCc
Confidence 9988654
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=1.2e-12 Score=119.91 Aligned_cols=158 Identities=18% Similarity=0.103 Sum_probs=108.0
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcC-----CeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTG-----LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA 127 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G-----~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 127 (320)
|++++||||||+||.+++++|+++| ++|++++|+..+.. . ....+..+.+|++|. +.++ +.
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-----~----~~~~~~~~~~Dl~d~--~~~~---~~ 66 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-----H----EDNPINYVQCDISDP--DDSQ---AK 66 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-----C----CSSCCEEEECCTTSH--HHHH---HH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-----c----ccCceEEEEeecCCH--HHHH---HH
Confidence 5789999999999999999999999 99999999865432 0 134577889999875 3333 33
Q ss_pred HcCCC-eEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEE-------EEcCcccccc
Q 020854 128 IEGLD-VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIV-------NIGSGAAIVI 199 (320)
Q Consensus 128 ~~~~~-id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv-------~vsS~~~~~~ 199 (320)
+.+.+ +|+|||+||.... +.+..+++|+.++.++++++.+.. .+..++| ++||.+.+..
T Consensus 67 ~~~~~~~d~vih~a~~~~~-----------~~~~~~~~n~~~~~~l~~a~~~~~--~~~~~~v~~~g~~i~~Ss~~vyg~ 133 (364)
T 2v6g_A 67 LSPLTDVTHVFYVTWANRS-----------TEQENCEANSKMFRNVLDAVIPNC--PNLKHISLQTGRKHYMGPFESYGK 133 (364)
T ss_dssp HTTCTTCCEEEECCCCCCS-----------SHHHHHHHHHHHHHHHHHHHTTTC--TTCCEEEEECCTHHHHCCGGGTTT
T ss_pred HhcCCCCCEEEECCCCCcc-----------hHHHHHHHhHHHHHHHHHHHHHhc--cccceEEeccCceEEEechhhccc
Confidence 44433 7799999996421 246678999999999999986642 1345676 6888754321
Q ss_pred C------------CCCCchhhHHHHHHHHHHHHHHHHHHccCC-ceEEEEeccceecC
Q 020854 200 P------------SDPLYSVYAATKAYIDQFSRSLYVEYRKSG-IDVQCQVPLYVATK 244 (320)
Q Consensus 200 ~------------~~~~~~~Y~asKaal~~~~~~l~~el~~~g-i~v~~v~PG~v~T~ 244 (320)
. ..+....|.+ .+.+.+.++. ..| +++..+.|+.+-.+
T Consensus 134 ~~~~~~~~~E~~~~~~~~~~y~~----~E~~~~~~~~---~~~~~~~~ilRp~~v~G~ 184 (364)
T 2v6g_A 134 IESHDPPYTEDLPRLKYMNFYYD----LEDIMLEEVE---KKEGLTWSVHRPGNIFGF 184 (364)
T ss_dssp SCCCCSSBCTTSCCCSSCCHHHH----HHHHHHHHHT---TSTTCEEEEEEESSEECC
T ss_pred cccCCCCCCccccCCccchhhHH----HHHHHHHHhh---cCCCceEEEECCCceeCC
Confidence 0 0122335632 3333333322 245 99999999988664
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.42 E-value=6.6e-13 Score=122.37 Aligned_cols=161 Identities=20% Similarity=0.144 Sum_probs=118.8
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCe
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV 133 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 133 (320)
+|+||||+|+||++++++|+++|+ +|+.++|+ .|. +.++++.+ ++
T Consensus 2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~---------------------------~d~--~~l~~~~~-----~~ 47 (369)
T 3st7_A 2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ---------------------------TKE--EELESALL-----KA 47 (369)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT---------------------------CCH--HHHHHHHH-----HC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC---------------------------CCH--HHHHHHhc-----cC
Confidence 699999999999999999999999 99998885 111 22333332 25
Q ss_pred EEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCC-cEEEEEcCccccccCCCCCchhhHHHH
Q 020854 134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYSVYAATK 212 (320)
Q Consensus 134 d~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~-g~Iv~vsS~~~~~~~~~~~~~~Y~asK 212 (320)
|+|||+||...+ . .....+++|+.++.++++++. +.+. .++|++||..... ...|+.+|
T Consensus 48 d~Vih~a~~~~~--~--------~~~~~~~~n~~~~~~l~~a~~----~~~~~~~~v~~Ss~~~~~------~~~Y~~sK 107 (369)
T 3st7_A 48 DFIVHLAGVNRP--E--------HDKEFSLGNVSYLDHVLDILT----RNTKKPAILLSSSIQATQ------DNPYGESK 107 (369)
T ss_dssp SEEEECCCSBCT--T--------CSTTCSSSCCBHHHHHHHHHT----TCSSCCEEEEEEEGGGGS------CSHHHHHH
T ss_pred CEEEECCcCCCC--C--------CHHHHHHHHHHHHHHHHHHHH----HhCCCCeEEEeCchhhcC------CCCchHHH
Confidence 699999997643 1 123345789999988888864 3333 4899999987754 46799999
Q ss_pred HHHHHHHHHHHHHHccCCceEEEEeccceecCCCc----------------cccC-------CCCCCCHHHHHHHHHHHh
Q 020854 213 AYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS----------------IKRS-------SFFVPSTDVYARAAMRWI 269 (320)
Q Consensus 213 aal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~----------------~~~~-------~~~~~~~~~~a~~i~~~l 269 (320)
.+.+.+.+.++.+. |+++..+.|+.+-.+... .... ...+...+++|+.++..+
T Consensus 108 ~~~E~~~~~~~~~~---g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l 184 (369)
T 3st7_A 108 LQGEQLLREYAEEY---GNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAI 184 (369)
T ss_dssp HHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh---CCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHH
Confidence 99999999998874 789999999988776321 0000 012346899999999998
Q ss_pred CCC
Q 020854 270 GYE 272 (320)
Q Consensus 270 ~~~ 272 (320)
..+
T Consensus 185 ~~~ 187 (369)
T 3st7_A 185 EGT 187 (369)
T ss_dssp HTC
T ss_pred hCC
Confidence 765
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=5.6e-13 Score=120.23 Aligned_cols=174 Identities=14% Similarity=0.099 Sum_probs=111.2
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
.++++||||||+||.+++++|+++|++|++++|+.+...+..+++.. ..+..+.+|++|. + .+.+.+.+
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~----~~v~~v~~Dl~d~--~---~l~~a~~~-- 79 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS----LGAIIVKGELDEH--E---KLVELMKK-- 79 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH----TTCEEEECCTTCH--H---HHHHHHTT--
T ss_pred CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc----CCCEEEEecCCCH--H---HHHHHHcC--
Confidence 36799999999999999999999999999999987521222222322 2367788999875 3 34444444
Q ss_pred eEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCcccccc----CCCCCchh
Q 020854 133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVI----PSDPLYSV 207 (320)
Q Consensus 133 id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~----~~~~~~~~ 207 (320)
+|+|||++|... +.+. +.+++.+++.+ .+++|. |..+... +..|....
T Consensus 80 ~d~vi~~a~~~~---------------------~~~~----~~l~~aa~~~g~v~~~v~--S~~g~~~~~~~~~~p~~~~ 132 (318)
T 2r6j_A 80 VDVVISALAFPQ---------------------ILDQ----FKILEAIKVAGNIKRFLP--SDFGVEEDRINALPPFEAL 132 (318)
T ss_dssp CSEEEECCCGGG---------------------STTH----HHHHHHHHHHCCCCEEEC--SCCSSCTTTCCCCHHHHHH
T ss_pred CCEEEECCchhh---------------------hHHH----HHHHHHHHhcCCCCEEEe--eccccCcccccCCCCcchh
Confidence 559999998531 1122 33333344444 568874 4344210 01122457
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCC--------c-c-------ccCCCCCCCHHHHHHHHHHHhCC
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMA--------S-I-------KRSSFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~--------~-~-------~~~~~~~~~~~~~a~~i~~~l~~ 271 (320)
| .+|.+++.+.+. .|++++.+.||++-.++. . . ......+..++++++.++..+..
T Consensus 133 y-~sK~~~e~~~~~-------~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~ 204 (318)
T 2r6j_A 133 I-ERKRMIRRAIEE-------ANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATD 204 (318)
T ss_dssp H-HHHHHHHHHHHH-------TTCCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTC
T ss_pred H-HHHHHHHHHHHh-------cCCCeEEEEcceehhhhhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcC
Confidence 8 999998887653 578899999987644321 1 0 00112245789999999998865
Q ss_pred C
Q 020854 272 E 272 (320)
Q Consensus 272 ~ 272 (320)
+
T Consensus 205 ~ 205 (318)
T 2r6j_A 205 P 205 (318)
T ss_dssp G
T ss_pred c
Confidence 4
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.6e-12 Score=117.29 Aligned_cols=173 Identities=10% Similarity=0.122 Sum_probs=111.4
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH------HHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP------DKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKE 126 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~------~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 126 (320)
.++++||||||+||++++++|+++|++|++++|+. ++.+ ..+++.. ..+..+.+|++|. + .+.+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~l~~~~~----~~v~~v~~D~~d~--~---~l~~ 73 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQ-LREEFRS----MGVTIIEGEMEEH--E---KMVS 73 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHH-HHHHHHH----TTCEEEECCTTCH--H---HHHH
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHH-HHHHhhc----CCcEEEEecCCCH--H---HHHH
Confidence 46799999999999999999999999999999986 2222 2222322 2467889999875 3 3444
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccc----cCC
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIV----IPS 201 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~----~~~ 201 (320)
.+.+ +|+|||++|... +.+. +.+++.+.+.+ .++|| .|..+.. .+.
T Consensus 74 a~~~--~d~vi~~a~~~~---------------------~~~~----~~l~~aa~~~g~v~~~v--~S~~g~~~~~~~~~ 124 (321)
T 3c1o_A 74 VLKQ--VDIVISALPFPM---------------------ISSQ----IHIINAIKAAGNIKRFL--PSDFGCEEDRIKPL 124 (321)
T ss_dssp HHTT--CSEEEECCCGGG---------------------SGGG----HHHHHHHHHHCCCCEEE--CSCCSSCGGGCCCC
T ss_pred HHcC--CCEEEECCCccc---------------------hhhH----HHHHHHHHHhCCccEEe--ccccccCccccccC
Confidence 4444 559999998531 1122 33334444444 56887 3444421 011
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCC-----------cc--------ccCCCCCCCHHHHH
Q 020854 202 DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMA-----------SI--------KRSSFFVPSTDVYA 262 (320)
Q Consensus 202 ~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~-----------~~--------~~~~~~~~~~~~~a 262 (320)
.|....| .+|.+++.+.+. .|++++.+.||++-.+.. .. .........++++|
T Consensus 125 ~p~~~~y-~sK~~~e~~~~~-------~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva 196 (321)
T 3c1o_A 125 PPFESVL-EKKRIIRRAIEA-------AALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIA 196 (321)
T ss_dssp HHHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHH
T ss_pred CCcchHH-HHHHHHHHHHHH-------cCCCeEEEEeceeccccccccccccccccccCceEEecCCCcceeEeeHHHHH
Confidence 1224579 999999888753 368888899987744221 00 00112246889999
Q ss_pred HHHHHHhCCC
Q 020854 263 RAAMRWIGYE 272 (320)
Q Consensus 263 ~~i~~~l~~~ 272 (320)
+.++..+..+
T Consensus 197 ~~~~~~l~~~ 206 (321)
T 3c1o_A 197 KYTIKVACDP 206 (321)
T ss_dssp HHHHHHHHCG
T ss_pred HHHHHHHhCc
Confidence 9999888543
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.39 E-value=5e-12 Score=113.48 Aligned_cols=177 Identities=16% Similarity=0.109 Sum_probs=116.4
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH-----HHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP-----DKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA 127 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~-----~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 127 (320)
.++++||||||+||++++++|+++|++|++++|+. ++.+.. +++. ...+..+.+|++|. + .+.+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~----~~~~~~~~~D~~d~--~---~l~~~ 73 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQML-LYFK----QLGAKLIEASLDDH--Q---RLVDA 73 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHH-HHHH----TTTCEEECCCSSCH--H---HHHHH
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHH-HHHH----hCCeEEEeCCCCCH--H---HHHHH
Confidence 46799999999999999999999999999999984 333222 2222 23477888999875 3 33444
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCcccccc-----CC
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVI-----PS 201 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~-----~~ 201 (320)
+.+ +|+|||++|.... . .|+.+..++++++ .+.+ -++||. |..+... +.
T Consensus 74 ~~~--~d~vi~~a~~~~~--~---------------~~~~~~~~l~~aa----~~~g~v~~~v~--S~~g~~~~~~~~~~ 128 (313)
T 1qyd_A 74 LKQ--VDVVISALAGGVL--S---------------HHILEQLKLVEAI----KEAGNIKRFLP--SEFGMDPDIMEHAL 128 (313)
T ss_dssp HTT--CSEEEECCCCSSS--S---------------TTTTTHHHHHHHH----HHSCCCSEEEC--SCCSSCTTSCCCCC
T ss_pred HhC--CCEEEECCccccc--h---------------hhHHHHHHHHHHH----HhcCCCceEEe--cCCcCCccccccCC
Confidence 444 5599999997532 1 1444555555554 4455 578874 4444211 11
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc-------------c-------cCCCCCCCHHHH
Q 020854 202 DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI-------------K-------RSSFFVPSTDVY 261 (320)
Q Consensus 202 ~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~-------------~-------~~~~~~~~~~~~ 261 (320)
.|....| .+|.+++.+.+ ..|++++.+.||++.+++... . .....+..++++
T Consensus 129 ~p~~~~y-~sK~~~e~~~~-------~~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dv 200 (313)
T 1qyd_A 129 QPGSITF-IDKRKVRRAIE-------AASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDV 200 (313)
T ss_dssp SSTTHHH-HHHHHHHHHHH-------HTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHH
T ss_pred CCCcchH-HHHHHHHHHHH-------hcCCCeEEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHH
Confidence 2445678 99999888765 257999999999875422110 0 001124578999
Q ss_pred HHHHHHHhCCC
Q 020854 262 ARAAMRWIGYE 272 (320)
Q Consensus 262 a~~i~~~l~~~ 272 (320)
|+.++..+..+
T Consensus 201 a~~~~~~l~~~ 211 (313)
T 1qyd_A 201 GTYTIKSIDDP 211 (313)
T ss_dssp HHHHHHHTTCG
T ss_pred HHHHHHHHhCc
Confidence 99999988654
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.35 E-value=4.1e-12 Score=113.84 Aligned_cols=174 Identities=16% Similarity=0.158 Sum_probs=110.1
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHH-----HHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKL-----KDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA 127 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~-----~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 127 (320)
.++++||||||+||++++++|+++|++|++++|+.... .+..+++. ...+..+.+|++|. +.+. +.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~----~~~v~~v~~D~~d~--~~l~---~~ 74 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK----ASGANIVHGSIDDH--ASLV---EA 74 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH----TTTCEEECCCTTCH--HHHH---HH
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH----hCCCEEEEeccCCH--HHHH---HH
Confidence 46799999999999999999999999999999984321 11112222 23477888999875 3333 33
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccc----cCCC
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIV----IPSD 202 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~----~~~~ 202 (320)
+.+ +|+|||++|... +.+...+++ .+++.+ .+++|. |+ .+.. .+..
T Consensus 75 ~~~--~d~vi~~a~~~~---------------------~~~~~~l~~----aa~~~g~v~~~v~-S~-~g~~~~~~~~~~ 125 (308)
T 1qyc_A 75 VKN--VDVVISTVGSLQ---------------------IESQVNIIK----AIKEVGTVKRFFP-SE-FGNDVDNVHAVE 125 (308)
T ss_dssp HHT--CSEEEECCCGGG---------------------SGGGHHHHH----HHHHHCCCSEEEC-SC-CSSCTTSCCCCT
T ss_pred HcC--CCEEEECCcchh---------------------hhhHHHHHH----HHHhcCCCceEee-cc-cccCccccccCC
Confidence 443 559999998531 112223333 344444 568873 44 4421 0112
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc-------------------ccCCCCCCCHHHHHH
Q 020854 203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI-------------------KRSSFFVPSTDVYAR 263 (320)
Q Consensus 203 ~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~-------------------~~~~~~~~~~~~~a~ 263 (320)
|....| .+|.+++.+.+. .|++++.+.||++.+++... .........++++|+
T Consensus 126 p~~~~y-~sK~~~e~~~~~-------~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ 197 (308)
T 1qyc_A 126 PAKSVF-EVKAKVRRAIEA-------EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGT 197 (308)
T ss_dssp THHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHH
T ss_pred cchhHH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHHHHHH
Confidence 335678 999998887753 37888999999875432110 000112457799999
Q ss_pred HHHHHhCCC
Q 020854 264 AAMRWIGYE 272 (320)
Q Consensus 264 ~i~~~l~~~ 272 (320)
.++..+..+
T Consensus 198 ~~~~~l~~~ 206 (308)
T 1qyc_A 198 FTIKAVDDP 206 (308)
T ss_dssp HHHTTSSCG
T ss_pred HHHHHHhCc
Confidence 998887643
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.26 E-value=5.6e-10 Score=99.54 Aligned_cols=208 Identities=15% Similarity=0.099 Sum_probs=128.6
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeE
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG 134 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 134 (320)
.||||||||-||+.++++|.++|++|++++|++.+ ..+. .| +...+.+. ++|
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~--------------~~~~---~~---------~~~~~~l~--~~d 53 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP--------------GRIT---WD---------ELAASGLP--SCD 53 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT--------------TEEE---HH---------HHHHHCCC--SCS
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc--------------Ceee---cc---------hhhHhhcc--CCC
Confidence 48999999999999999999999999999997532 1111 11 01112233 466
Q ss_pred EEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC---------CCCCc
Q 020854 135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------SDPLY 205 (320)
Q Consensus 135 ~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~---------~~~~~ 205 (320)
.+||.||.... .+....+.+..+.+++.|+.++-.+.+.+... ..+..++|..||...+... +....
T Consensus 54 ~vihla~~~i~--~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~--~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~ 129 (298)
T 4b4o_A 54 AAVNLAGENIL--NPLRRWNETFQKEVLGSRLETTQLLAKAITKA--PQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDF 129 (298)
T ss_dssp EEEECCCCCSS--CTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHC--SSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCS
T ss_pred EEEEeccCccc--chhhhhhhhhhhhhhhHHHHHHHHHHHHHHHh--CCCceEEEEEeeeeeecCCCCCcccccCCcccc
Confidence 99999986432 22334566777788899999988887775432 2234567777876654311 11122
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc------------------cccCCCCCCCHHHHHHHHHH
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS------------------IKRSSFFVPSTDVYARAAMR 267 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~------------------~~~~~~~~~~~~~~a~~i~~ 267 (320)
..|+.+|...+.. ......++++..+.||.|-.+-.. .......+...+++++.++.
T Consensus 130 ~~~~~~~~~~e~~-----~~~~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~ 204 (298)
T 4b4o_A 130 DFFSNLVTKWEAA-----ARLPGDSTRQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTH 204 (298)
T ss_dssp SHHHHHHHHHHHH-----HCCSSSSSEEEEEEECEEECTTSHHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHH
T ss_pred chhHHHHHHHHHH-----HHhhccCCceeeeeeeeEEcCCCCchhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHH
Confidence 3455554443321 223467899999999998776321 01111224578999999999
Q ss_pred HhCCCCc------cc--CCchHHHHHHHHhh--------chHHHHHHH
Q 020854 268 WIGYEPC------CT--PYWPHSFIWGVLSI--------LPEKLIDAG 299 (320)
Q Consensus 268 ~l~~~~~------~~--~~~~~~~~~~l~~~--------~P~~~~~~~ 299 (320)
.+..+.. +. +....+++..+.+. +|.|+.+..
T Consensus 205 ~~~~~~~~g~yn~~~~~~~t~~e~~~~ia~~lgrp~~~pvP~~~~~~~ 252 (298)
T 4b4o_A 205 ALEANHVHGVLNGVAPSSATNAEFAQTFGAALGRRAFIPLPSAVVQAV 252 (298)
T ss_dssp HHHCTTCCEEEEESCSCCCBHHHHHHHHHHHHTCCCCCCBCHHHHHHH
T ss_pred HHhCCCCCCeEEEECCCccCHHHHHHHHHHHhCcCCcccCCHHHHHHH
Confidence 8865521 22 22334455555553 477776654
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=8.4e-13 Score=117.77 Aligned_cols=110 Identities=21% Similarity=0.257 Sum_probs=78.3
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
+++||+++||||+||||+++++.|+++|++|++++|+.++.++..+++.... .+..+.+|+++. + ++.+.+.
T Consensus 116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~---~~~~~~~D~~~~--~---~~~~~~~ 187 (287)
T 1lu9_A 116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF---KVNVTAAETADD--A---SRAEAVK 187 (287)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH---TCCCEEEECCSH--H---HHHHHTT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEecCCCH--H---HHHHHHH
Confidence 4679999999999999999999999999999999999999888888876532 245677898875 3 3333344
Q ss_pred CCCeEEEEEccCCCCCccccccCCCH-HHHHHHHHHHhHHHH
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQ-VLLKNLIKVNVEGTT 170 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~-~~~~~~~~~N~~g~~ 170 (320)
. +|+||||+|.... ..+..+.+. +.++.++++|+.+++
T Consensus 188 ~--~DvlVn~ag~g~~-~~~~~~~~~~~~~~~~~dvn~~~~~ 226 (287)
T 1lu9_A 188 G--AHFVFTAGAIGLE-LLPQAAWQNESSIEIVADYNAQPPL 226 (287)
T ss_dssp T--CSEEEECCCTTCC-SBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred h--CCEEEECCCcccc-CCChhHcCchHHHHHHHHhhhhhhH
Confidence 3 4699999986432 112222222 334446666666655
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=2.4e-12 Score=109.83 Aligned_cols=182 Identities=13% Similarity=0.098 Sum_probs=108.1
Q ss_pred cCCCEEEEECC----------------CCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCC
Q 020854 51 KYGSWALVTGP----------------TDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114 (320)
Q Consensus 51 ~~gk~vlITGa----------------s~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~ 114 (320)
+.||+|||||| |||||+++|++|+++|++|++++++.. ++ . +. .+. .+|++
T Consensus 6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~-----~----~~-g~~--~~dv~ 72 (226)
T 1u7z_A 6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP-----T----PP-FVK--RVDVM 72 (226)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC-----C----CT-TEE--EEECC
T ss_pred CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc-----c----CC-CCe--EEccC
Confidence 56999999999 689999999999999999999988652 11 0 11 122 45766
Q ss_pred CCcHHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHH--HHHHhHHHHHHHHHHhHhhhcC-CCcEEEEE
Q 020854 115 GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNL--IKVNVEGTTKVTQAVLPGMLKR-KKGAIVNI 191 (320)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~--~~~N~~g~~~l~~~~~~~l~~~-~~g~Iv~v 191 (320)
+ .++.++.+.+.+++.| ++|||||+... .+.. ...+.+.+. -+.|+.-.+..+.-+++.+.+. ..+.+ .|
T Consensus 73 ~-~~~~~~~v~~~~~~~D--ili~~Aav~d~--~p~~-~~~~KIkk~~~~~~~l~l~L~~~pdIL~~l~~~~~~~~~-~V 145 (226)
T 1u7z_A 73 T-ALEMEAAVNASVQQQN--IFIGCAAVADY--RAAT-VAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPY-VV 145 (226)
T ss_dssp S-HHHHHHHHHHHGGGCS--EEEECCBCCSE--EESS-CCSSCC-------CEEEEEEEECCCHHHHHHHCSSSCCE-EE
T ss_pred c-HHHHHHHHHHhcCCCC--EEEECCcccCC--CCcc-CChHHhccccccCCceEEEEeecHHHHHHHHhhhcCCcE-EE
Confidence 5 4567788888888655 99999998642 2221 222222220 0112222233333444555543 22332 11
Q ss_pred cCccccccCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccc-eecCCCcc-------cc---CCCCCCCHHH
Q 020854 192 GSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLY-VATKMASI-------KR---SSFFVPSTDV 260 (320)
Q Consensus 192 sS~~~~~~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~-v~T~~~~~-------~~---~~~~~~~~~~ 260 (320)
+.++. . +.+.+..+.++..+|+++.+.+|.- ..+++... .. ......+.++
T Consensus 146 -GFaaE--------t---------~~l~e~A~~kL~~k~~d~ivaN~~~~~~~~f~~~~n~v~li~~~~~~~~~~~sK~~ 207 (226)
T 1u7z_A 146 -GFAAE--------T---------NNVEEYARQKRIRKNLDLICANDVSQPTQGFNSDNNALHLFWQDGDKVLPLERKEL 207 (226)
T ss_dssp -EEEEE--------S---------SSHHHHHHHHHHHHTCSEEEEEECSSTTSSTTSSEEEEEEEETTEEEEEEEEEHHH
T ss_pred -Ecchh--------h---------chHHHHHHHHHHhcCCCEEEEeeccccCCccCCCceEEEEEeCCCcEecCCCCHHH
Confidence 11111 1 3367777888888898888888764 33444321 01 1123467889
Q ss_pred HHHHHHHHhC
Q 020854 261 YARAAMRWIG 270 (320)
Q Consensus 261 ~a~~i~~~l~ 270 (320)
+|+.|+..+.
T Consensus 208 vA~~I~~~i~ 217 (226)
T 1u7z_A 208 LGQLLLDEIV 217 (226)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9998888764
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=1.7e-09 Score=98.11 Aligned_cols=163 Identities=18% Similarity=0.163 Sum_probs=105.2
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCC-------eEEEEeCCH--HHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHH
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGL-------NLVLVGRNP--DKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERI 124 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~-------~Vil~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~ 124 (320)
..++||||+|.||..++..|+++|. +|++++++. ++.+....++... ...+. .|+.+. ..+
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~--~~~~~---~di~~~-----~~~ 74 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC--AFPLL---AGLEAT-----DDP 74 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT--TCTTE---EEEEEE-----SCH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcc--ccccc---CCeEec-----cCh
Confidence 4699999999999999999999986 799999875 3333333344321 11121 344331 112
Q ss_pred HHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccc-------
Q 020854 125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAI------- 197 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~------- 197 (320)
.+.+. +.|+|||.||.... + ..+. .+.+++|+.++..+++.+...- ..+++++++|+....
T Consensus 75 ~~a~~--~~D~Vih~Ag~~~~---~--~~~~---~~~~~~Nv~~t~~l~~a~~~~~--~~~~~vvv~snp~~~~~~~~~~ 142 (327)
T 1y7t_A 75 KVAFK--DADYALLVGAAPRK---A--GMER---RDLLQVNGKIFTEQGRALAEVA--KKDVKVLVVGNPANTNALIAYK 142 (327)
T ss_dssp HHHTT--TCSEEEECCCCCCC---T--TCCH---HHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHH
T ss_pred HHHhC--CCCEEEECCCcCCC---C--CCCH---HHHHHHHHHHHHHHHHHHHhhc--CCCeEEEEeCCchhhhHHHHHH
Confidence 22333 35699999997542 1 2233 4578999999999999876531 134688888886521
Q ss_pred ccCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccce
Q 020854 198 VIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYV 241 (320)
Q Consensus 198 ~~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v 241 (320)
..++.+....|+.||...+.+...++..+ |+++..+.|..|
T Consensus 143 ~~~~~~p~~~yg~tkl~~er~~~~~a~~~---g~~~~~vr~~~V 183 (327)
T 1y7t_A 143 NAPGLNPRNFTAMTRLDHNRAKAQLAKKT---GTGVDRIRRMTV 183 (327)
T ss_dssp TCTTSCGGGEEECCHHHHHHHHHHHHHHH---TCCGGGEECCEE
T ss_pred HcCCCChhheeccchHHHHHHHHHHHHHh---CcChhheeeeEE
Confidence 11123345569999999999888888765 455555555444
|
| >3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* | Back alignment and structure |
|---|
Probab=98.80 E-value=8.6e-11 Score=110.56 Aligned_cols=187 Identities=13% Similarity=0.129 Sum_probs=99.5
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHH------hhcCCceEEEEEEeCCCCcHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQ------AKYAKTQIKSVVVDFSGDLDEGV 121 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~------~~~~~~~~~~~~~D~~~~~~~~~ 121 (320)
++.+.||+|+|||++ |||+++|+.|+..|++|+++++++.+..+...+.. +......+... .+.. .+.+
T Consensus 260 g~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv~~lee~~~~aDvVi~---atG~-~~vl 334 (488)
T 3ond_A 260 DVMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSEADIFVT---TTGN-KDII 334 (488)
T ss_dssp CCCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGTTTTCSEEEE---CSSC-SCSB
T ss_pred CCcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCccCCHHHHHHhcCEEEe---CCCC-hhhh
Confidence 445779999999987 99999999999999999999999877665443210 00001111111 1110 0111
Q ss_pred HHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHH-------HHHHhHHHHHHH-HHHhHhhhcCCCcEEEEEcC
Q 020854 122 ERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNL-------IKVNVEGTTKVT-QAVLPGMLKRKKGAIVNIGS 193 (320)
Q Consensus 122 ~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~-------~~~N~~g~~~l~-~~~~~~l~~~~~g~Iv~vsS 193 (320)
.. +.+...+.+.+|+|+|... .+.+.+.++.. +..|+.+..... +..++.+ ..|+|||+||
T Consensus 335 ~~--e~l~~mk~gaiVvNaG~~~------~Ei~~~~l~~~~~v~~~~i~~~v~~~~~~~fg~aI~lL---aeGRIVNlsS 403 (488)
T 3ond_A 335 ML--DHMKKMKNNAIVCNIGHFD------NEIDMLGLETHPGVKRITIKPQTDRWVFPETNTGIIIL---AEGRLMNLGC 403 (488)
T ss_dssp CH--HHHTTSCTTEEEEESSSTT------TTBTHHHHHTSTTCEEEEEETTEEEEECTTTCCEEEEE---GGGSCHHHHH
T ss_pred hH--HHHHhcCCCeEEEEcCCCC------cccchHHHHHhhhhheEEeeeeEEEEEecchHHHHHHH---cCCcEEEEec
Confidence 11 1233333447888888642 24455555433 122222222111 2233333 2389999999
Q ss_pred ccccccCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCC
Q 020854 194 GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 194 ~~~~~~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~ 271 (320)
..|+- +|.++-+.. .+.|+.++...+..++.+.||. +++.+. -.|++|+.-+..++-
T Consensus 404 ~~G~p--------~~vm~~sfa---~Q~la~~~l~~~~~~~~~~~gv--~~lp~~--------ld~~vA~l~l~~~g~ 460 (488)
T 3ond_A 404 ATGHP--------SFVMSCSFT---NQVIAQLELWNEKSSGKYEKKV--YVLPKH--------LDEKVAALHLEKLGA 460 (488)
T ss_dssp SCCSC--------HHHHHHHHH---HHHHHHHHHHHTTTTCCCCSSE--ECCCHH--------HHHHHHHHHHGGGTC
T ss_pred CcccC--------cccccccHH---HHHHHHHHHHhCCCccccCCCc--eeCCHH--------HHHHHHHHhchhcCC
Confidence 88753 233333222 3466665443344444556665 333321 245566666655543
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=98.77 E-value=2.2e-08 Score=85.52 Aligned_cols=79 Identities=19% Similarity=0.273 Sum_probs=58.6
Q ss_pred CCCEEEEECC----------------CCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCC
Q 020854 52 YGSWALVTGP----------------TDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115 (320)
Q Consensus 52 ~gk~vlITGa----------------s~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~ 115 (320)
+||+|||||| ||++|.++|++++++|++|++++|+... .. .. ...+..+ |+.
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~-~~-------~~-~~~~~~~--~v~- 69 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRAL-KP-------EP-HPNLSIR--EIT- 69 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSC-CC-------CC-CTTEEEE--ECC-
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccc-cc-------cC-CCCeEEE--EHh-
Confidence 5899999999 7889999999999999999999997531 10 00 1123333 333
Q ss_pred CcHHHHHHHHHHHcCCCeEEEEEccCCCC
Q 020854 116 DLDEGVERIKEAIEGLDVGVLINNVGISY 144 (320)
Q Consensus 116 ~~~~~~~~~~~~~~~~~id~lI~nAG~~~ 144 (320)
..++..+.+.+.+++.| ++|+|||+..
T Consensus 70 s~~em~~~v~~~~~~~D--ili~aAAvsD 96 (232)
T 2gk4_A 70 NTKDLLIEMQERVQDYQ--VLIHSMAVSD 96 (232)
T ss_dssp SHHHHHHHHHHHGGGCS--EEEECSBCCS
T ss_pred HHHHHHHHHHHhcCCCC--EEEEcCcccc
Confidence 34677888888888655 9999999865
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=98.72 E-value=5e-08 Score=81.54 Aligned_cols=104 Identities=18% Similarity=0.208 Sum_probs=74.1
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++|+||||+||||.++++.+...|++|++++|++++.+... +. +.. ..+|..+. +..+.+.+..+..
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~----~~--g~~---~~~d~~~~--~~~~~~~~~~~~~ 106 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS----RL--GVE---YVGDSRSV--DFADEILELTDGY 106 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----TT--CCS---EEEETTCS--THHHHHHHHTTTC
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----Hc--CCC---EEeeCCcH--HHHHHHHHHhCCC
Confidence 5899999999999999999999999999999999987765432 22 222 12476654 4556666655544
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccc
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAA 196 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~ 196 (320)
.+|++|+|+|. . ..+.+++.++ +.|++|++++...
T Consensus 107 ~~D~vi~~~g~--~--------------------------~~~~~~~~l~--~~G~~v~~g~~~~ 141 (198)
T 1pqw_A 107 GVDVVLNSLAG--E--------------------------AIQRGVQILA--PGGRFIELGKKDV 141 (198)
T ss_dssp CEEEEEECCCT--H--------------------------HHHHHHHTEE--EEEEEEECSCGGG
T ss_pred CCeEEEECCch--H--------------------------HHHHHHHHhc--cCCEEEEEcCCCC
Confidence 68999999972 0 0234455553 4689999988653
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=98.60 E-value=1.8e-07 Score=70.89 Aligned_cols=74 Identities=16% Similarity=0.237 Sum_probs=56.6
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcC-CeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G-~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.++.++|+|+ |++|.++++.|.+.| ++|++++|+.++.+... ...+..+.+|+.+. +.+.+.+.+
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~--------~~~~~~~~~d~~~~-----~~~~~~~~~ 69 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN--------RMGVATKQVDAKDE-----AGLAKALGG 69 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH--------TTTCEEEECCTTCH-----HHHHHHTTT
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH--------hCCCcEEEecCCCH-----HHHHHHHcC
Confidence 3578999999 999999999999999 89999999998776543 12355677888764 333344443
Q ss_pred CCeEEEEEccC
Q 020854 131 LDVGVLINNVG 141 (320)
Q Consensus 131 ~~id~lI~nAG 141 (320)
+|++|+++|
T Consensus 70 --~d~vi~~~~ 78 (118)
T 3ic5_A 70 --FDAVISAAP 78 (118)
T ss_dssp --CSEEEECSC
T ss_pred --CCEEEECCC
Confidence 559999986
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=98.54 E-value=3.1e-07 Score=85.56 Aligned_cols=83 Identities=22% Similarity=0.269 Sum_probs=65.8
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcC---CeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTG---LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G---~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
+.++|+|| ||||+++++.|++.| .+|++++|+.+++++..+++...+ +.++..+.+|++|. +.++++.+..
T Consensus 2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~-~~~~~~~~~D~~d~--~~l~~~l~~~-- 75 (405)
T 4ina_A 2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKG-YGEIDITTVDADSI--EELVALINEV-- 75 (405)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTT-CCCCEEEECCTTCH--HHHHHHHHHH--
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhc-CCceEEEEecCCCH--HHHHHHHHhh--
Confidence 46899999 899999999999998 389999999999999888886543 24578889999875 4555555443
Q ss_pred CCeEEEEEccCCC
Q 020854 131 LDVGVLINNVGIS 143 (320)
Q Consensus 131 ~~id~lI~nAG~~ 143 (320)
++|+||||+|..
T Consensus 76 -~~DvVin~ag~~ 87 (405)
T 4ina_A 76 -KPQIVLNIALPY 87 (405)
T ss_dssp -CCSEEEECSCGG
T ss_pred -CCCEEEECCCcc
Confidence 466999999853
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=4.2e-07 Score=82.30 Aligned_cols=78 Identities=18% Similarity=0.227 Sum_probs=58.2
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCC-CcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG-DLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 130 (320)
.|++|+||||+||||.++++.+...|++|++++++.++++.. +++ +.. ..+|.++ + +..+.+.+..+
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~-----g~~---~~~d~~~~~--~~~~~~~~~~~- 212 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI-----GFD---AAFNYKTVN--SLEEALKKASP- 212 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT-----TCS---EEEETTSCS--CHHHHHHHHCT-
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc-----CCc---EEEecCCHH--HHHHHHHHHhC-
Confidence 589999999999999999999999999999999998877654 333 222 2357765 3 33344444333
Q ss_pred CCeEEEEEccC
Q 020854 131 LDVGVLINNVG 141 (320)
Q Consensus 131 ~~id~lI~nAG 141 (320)
..+|++|+|+|
T Consensus 213 ~~~d~vi~~~g 223 (333)
T 1v3u_A 213 DGYDCYFDNVG 223 (333)
T ss_dssp TCEEEEEESSC
T ss_pred CCCeEEEECCC
Confidence 36889999998
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=1.4e-08 Score=97.68 Aligned_cols=101 Identities=15% Similarity=0.187 Sum_probs=65.3
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
.++||+++|||| ||+|+++++.|++.|++|++++|+.++++++.+++. ..+. ++.| + +.++
T Consensus 361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~-----~~~~----~~~d-l--------~~~~ 421 (523)
T 2o7s_A 361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIG-----GKAL----SLTD-L--------DNYH 421 (523)
T ss_dssp -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTT-----C-CE----ETTT-T--------TTC-
T ss_pred ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC-----Ccee----eHHH-h--------hhcc
Confidence 356899999999 599999999999999999999999998887776551 1111 2221 1 1112
Q ss_pred CCCeEEEEEccCCCCCc---cccccCCCHHHHHHHHHHHhHHH
Q 020854 130 GLDVGVLINNVGISYPY---ARFFHEVDQVLLKNLIKVNVEGT 169 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~---~~~~~~~~~~~~~~~~~~N~~g~ 169 (320)
..++|+||||+|..... ..++.+.+.+.+..++++|+.+.
T Consensus 422 ~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~ 464 (523)
T 2o7s_A 422 PEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPR 464 (523)
T ss_dssp -CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSS
T ss_pred ccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCc
Confidence 22478999999975321 13455555666677778887654
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=98.51 E-value=5.8e-07 Score=81.36 Aligned_cols=80 Identities=16% Similarity=0.314 Sum_probs=61.4
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++|+||||+||||.++++.+...|++|+.++|+.++++... ++ +.. ..+|..+. +..+++.+..+..
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~-----g~~---~~~d~~~~--~~~~~i~~~~~~~ 213 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-KL-----GCH---HTINYSTQ--DFAEVVREITGGK 213 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH-----TCS---EEEETTTS--CHHHHHHHHHTTC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCC---EEEECCCH--HHHHHHHHHhCCC
Confidence 4899999999999999999999999999999999988776543 22 222 22466654 4556666665555
Q ss_pred CeEEEEEccCC
Q 020854 132 DVGVLINNVGI 142 (320)
Q Consensus 132 ~id~lI~nAG~ 142 (320)
.+|++|+|+|.
T Consensus 214 ~~d~vi~~~g~ 224 (333)
T 1wly_A 214 GVDVVYDSIGK 224 (333)
T ss_dssp CEEEEEECSCT
T ss_pred CCeEEEECCcH
Confidence 68999999984
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=98.51 E-value=5.2e-07 Score=81.44 Aligned_cols=104 Identities=20% Similarity=0.268 Sum_probs=75.5
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++|+||||+||||.++++.+...|++|+.+++++++++...+ + +.. ..+|..+. +..+++.+..+..
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~-----g~~---~~~~~~~~--~~~~~~~~~~~~~ 208 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A-----GAW---QVINYREE--DLVERLKEITGGK 208 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H-----TCS---EEEETTTS--CHHHHHHHHTTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c-----CCC---EEEECCCc--cHHHHHHHHhCCC
Confidence 48999999999999999999999999999999999887665432 2 222 12466654 5556666665554
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccc
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAA 196 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~ 196 (320)
.+|++|+|+| .. . .+..++.++ +.|+++.+++..+
T Consensus 209 ~~D~vi~~~g--~~---~-----------------------~~~~~~~l~--~~G~iv~~g~~~~ 243 (327)
T 1qor_A 209 KVRVVYDSVG--RD---T-----------------------WERSLDCLQ--RRGLMVSFGNSSG 243 (327)
T ss_dssp CEEEEEECSC--GG---G-----------------------HHHHHHTEE--EEEEEEECCCTTC
T ss_pred CceEEEECCc--hH---H-----------------------HHHHHHHhc--CCCEEEEEecCCC
Confidence 6899999998 21 0 244445453 4689999988654
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=98.50 E-value=6.4e-07 Score=81.84 Aligned_cols=80 Identities=14% Similarity=0.257 Sum_probs=61.9
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++|+||||+||||.++++.+...|++|+++++++++++.. +++ +.. ..+|..+. +..+++.+..+..
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~--~~~~~~~~~~~~~ 230 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL-----GAA---AGFNYKKE--DFSEATLKFTKGA 230 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH-----TCS---EEEETTTS--CHHHHHHHHTTTS
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCc---EEEecCCh--HHHHHHHHHhcCC
Confidence 489999999999999999999999999999999998887654 333 222 23566654 5556666665544
Q ss_pred CeEEEEEccCC
Q 020854 132 DVGVLINNVGI 142 (320)
Q Consensus 132 ~id~lI~nAG~ 142 (320)
.+|++|+|+|.
T Consensus 231 ~~d~vi~~~G~ 241 (354)
T 2j8z_A 231 GVNLILDCIGG 241 (354)
T ss_dssp CEEEEEESSCG
T ss_pred CceEEEECCCc
Confidence 68999999983
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=98.47 E-value=8.3e-07 Score=81.04 Aligned_cols=79 Identities=18% Similarity=0.233 Sum_probs=61.2
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++|+|+||+||||.++++.+...|++|+.+++++++++.. +++ +.. ..+|..+. +..+++.+..+..
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~-----ga~---~~~d~~~~--~~~~~~~~~~~~~ 238 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQN-----GAH---EVFNHREV--NYIDKIKKYVGEK 238 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT-----TCS---EEEETTST--THHHHHHHHHCTT
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHc-----CCC---EEEeCCCc--hHHHHHHHHcCCC
Confidence 489999999999999999999999999999999998877632 222 222 23466654 5666777766655
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
.+|++|+|+|
T Consensus 239 ~~D~vi~~~G 248 (351)
T 1yb5_A 239 GIDIIIEMLA 248 (351)
T ss_dssp CEEEEEESCH
T ss_pred CcEEEEECCC
Confidence 6899999998
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=5.5e-07 Score=82.31 Aligned_cols=104 Identities=18% Similarity=0.250 Sum_probs=74.2
Q ss_pred CC--CEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 52 YG--SWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 52 ~g--k~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
.| ++|+||||+||||.++++.+...|+ +|++++++.++++...+++ +.. ..+|..+. +..+.+.+..
T Consensus 158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~-----g~~---~~~d~~~~--~~~~~~~~~~ 227 (357)
T 2zb4_A 158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL-----GFD---AAINYKKD--NVAEQLRESC 227 (357)
T ss_dssp TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS-----CCS---EEEETTTS--CHHHHHHHHC
T ss_pred CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc-----CCc---eEEecCch--HHHHHHHHhc
Confidence 36 9999999999999999999999999 9999999988766554323 222 23566654 4555565555
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccc
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAA 196 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~ 196 (320)
+. .+|++|+|+|. . ..+.+++.++ +.|++|.++...+
T Consensus 228 ~~-~~d~vi~~~G~--~--------------------------~~~~~~~~l~--~~G~iv~~G~~~~ 264 (357)
T 2zb4_A 228 PA-GVDVYFDNVGG--N--------------------------ISDTVISQMN--ENSHIILCGQISQ 264 (357)
T ss_dssp TT-CEEEEEESCCH--H--------------------------HHHHHHHTEE--EEEEEEECCCGGG
T ss_pred CC-CCCEEEECCCH--H--------------------------HHHHHHHHhc--cCcEEEEECCccc
Confidence 55 68999999982 0 1233455453 4699999987654
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=98.45 E-value=1.3e-07 Score=84.06 Aligned_cols=81 Identities=27% Similarity=0.435 Sum_probs=58.7
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
+++||+++|||++ |+|+++++.|++.| +|++++|+.++++++.+++...+.... .+.+|+.+. .+.++
T Consensus 125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~--~~~~d~~~~--------~~~~~ 192 (287)
T 1nvt_A 125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKF--GEEVKFSGL--------DVDLD 192 (287)
T ss_dssp CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCH--HHHEEEECT--------TCCCT
T ss_pred CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhccccc--ceeEEEeeH--------HHhhC
Confidence 4669999999997 99999999999999 999999999998888887754321010 112343321 12223
Q ss_pred CCCeEEEEEccCCCC
Q 020854 130 GLDVGVLINNVGISY 144 (320)
Q Consensus 130 ~~~id~lI~nAG~~~ 144 (320)
++|+||||+|...
T Consensus 193 --~~DilVn~ag~~~ 205 (287)
T 1nvt_A 193 --GVDIIINATPIGM 205 (287)
T ss_dssp --TCCEEEECSCTTC
T ss_pred --CCCEEEECCCCCC
Confidence 4669999999754
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.41 E-value=6.5e-07 Score=82.37 Aligned_cols=108 Identities=18% Similarity=0.226 Sum_probs=69.9
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
.+++++|+|+|+ |+||+++++.+...|++|++++|+.++++...+.+ +.. +.+|.++. +. +.+.+.
T Consensus 163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~-----g~~---~~~~~~~~--~~---l~~~~~ 228 (369)
T 2eez_A 163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF-----GGR---VITLTATE--AN---IKKSVQ 228 (369)
T ss_dssp BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----TTS---EEEEECCH--HH---HHHHHH
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc-----Cce---EEEecCCH--HH---HHHHHh
Confidence 367899999999 99999999999999999999999998876554322 222 34555543 22 333334
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccc
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAA 196 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~ 196 (320)
+ .|++|+++|.... .. +..+.+..++.|+ +++.||++++..+
T Consensus 229 ~--~DvVi~~~g~~~~-~~--------------------~~li~~~~l~~mk--~gg~iV~v~~~~g 270 (369)
T 2eez_A 229 H--ADLLIGAVLVPGA-KA--------------------PKLVTRDMLSLMK--EGAVIVDVAVDQG 270 (369)
T ss_dssp H--CSEEEECCC----------------------------CCSCHHHHTTSC--TTCEEEECC----
T ss_pred C--CCEEEECCCCCcc-cc--------------------chhHHHHHHHhhc--CCCEEEEEecCCC
Confidence 3 4599999986421 00 1223456666673 5789999998653
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=1.1e-06 Score=79.60 Aligned_cols=104 Identities=17% Similarity=0.276 Sum_probs=74.3
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++|+|+||+||||.+.++.+...|++|+.+++++++++...+++ +.. ..+|..+. +..+.+.+..++
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~-----g~~---~~~~~~~~--~~~~~~~~~~~~- 217 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL-----GFD---GAIDYKNE--DLAAGLKRECPK- 217 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT-----CCS---EEEETTTS--CHHHHHHHHCTT-
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCC---EEEECCCH--HHHHHHHHhcCC-
Confidence 5899999999999999999999999999999999998877653433 221 22466554 455555555443
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccc
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAA 196 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~ 196 (320)
.+|++|+|+|.. ..+.+++.+ ++.|+++.+++..+
T Consensus 218 ~~d~vi~~~g~~----------------------------~~~~~~~~l--~~~G~iv~~G~~~~ 252 (336)
T 4b7c_A 218 GIDVFFDNVGGE----------------------------ILDTVLTRI--AFKARIVLCGAISQ 252 (336)
T ss_dssp CEEEEEESSCHH----------------------------HHHHHHTTE--EEEEEEEECCCGGG
T ss_pred CceEEEECCCcc----------------------------hHHHHHHHH--hhCCEEEEEeeccc
Confidence 688999999830 123344445 34699999987664
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.33 E-value=2.7e-06 Score=77.43 Aligned_cols=104 Identities=21% Similarity=0.292 Sum_probs=72.4
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++|+|+||+||||.++++.+...|++|++++|+.++++.. +++ +.. ..+|.++. ++..+.+.+..+.
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~-~~~-----g~~---~~~d~~~~-~~~~~~~~~~~~~- 237 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF-RSI-----GGE---VFIDFTKE-KDIVGAVLKATDG- 237 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH-HHT-----TCC---EEEETTTC-SCHHHHHHHHHTS-
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH-HHc-----CCc---eEEecCcc-HhHHHHHHHHhCC-
Confidence 489999999999999999999999999999999998876433 222 222 23476632 1333444444444
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcc
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGA 195 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~ 195 (320)
.+|++|+|+|.. + ..+.+++.+. +.|++|.+++..
T Consensus 238 ~~D~vi~~~g~~------------~---------------~~~~~~~~l~--~~G~iv~~g~~~ 272 (347)
T 2hcy_A 238 GAHGVINVSVSE------------A---------------AIEASTRYVR--ANGTTVLVGMPA 272 (347)
T ss_dssp CEEEEEECSSCH------------H---------------HHHHHTTSEE--EEEEEEECCCCT
T ss_pred CCCEEEECCCcH------------H---------------HHHHHHHHHh--cCCEEEEEeCCC
Confidence 688999999831 0 2355566553 468999998754
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=4.5e-06 Score=74.76 Aligned_cols=85 Identities=16% Similarity=0.310 Sum_probs=62.8
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCC---HHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRN---PDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVER 123 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~ 123 (320)
..+++||+++|+|+ ||+|++++..|++.|+ +|++++|+ .++.+++++++....+ ..+.. .++.+. ++
T Consensus 149 ~~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~-~~~~~--~~~~~~-----~~ 219 (315)
T 3tnl_A 149 GHDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTD-CKAQL--FDIEDH-----EQ 219 (315)
T ss_dssp TCCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS-CEEEE--EETTCH-----HH
T ss_pred CCCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcC-CceEE--eccchH-----HH
Confidence 34577999999998 7999999999999999 89999999 8899998888876542 33333 344332 33
Q ss_pred HHHHHcCCCeEEEEEccCCC
Q 020854 124 IKEAIEGLDVGVLINNVGIS 143 (320)
Q Consensus 124 ~~~~~~~~~id~lI~nAG~~ 143 (320)
+.+.+...| +|||+....
T Consensus 220 l~~~l~~aD--iIINaTp~G 237 (315)
T 3tnl_A 220 LRKEIAESV--IFTNATGVG 237 (315)
T ss_dssp HHHHHHTCS--EEEECSSTT
T ss_pred HHhhhcCCC--EEEECccCC
Confidence 444455445 899887654
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.29 E-value=4.4e-06 Score=75.89 Aligned_cols=104 Identities=14% Similarity=0.244 Sum_probs=74.2
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++|+|+||+||+|.++++.+...|++|+.+++++++++... ++ +... .+|..+. +..+.+.+..+..
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~-----ga~~---~~d~~~~--~~~~~~~~~~~~~ 234 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL-----GADE---TVNYTHP--DWPKEVRRLTGGK 234 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH-----TCSE---EEETTST--THHHHHHHHTTTT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc-----CCCE---EEcCCcc--cHHHHHHHHhCCC
Confidence 4899999999999999999999999999999999988876543 22 2221 2466654 4455565555444
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccc
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAA 196 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~ 196 (320)
.+|++|+|+| ... .+.+++.+. +.|+++.+++..+
T Consensus 235 ~~d~vi~~~g-~~~---------------------------~~~~~~~l~--~~G~~v~~g~~~~ 269 (343)
T 2eih_A 235 GADKVVDHTG-ALY---------------------------FEGVIKATA--NGGRIAIAGASSG 269 (343)
T ss_dssp CEEEEEESSC-SSS---------------------------HHHHHHHEE--EEEEEEESSCCCS
T ss_pred CceEEEECCC-HHH---------------------------HHHHHHhhc--cCCEEEEEecCCC
Confidence 6889999998 210 133444453 4689999987654
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=98.27 E-value=2.3e-06 Score=77.73 Aligned_cols=80 Identities=13% Similarity=0.209 Sum_probs=56.1
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++|+|+||+||||.++++.+...|++|++++++.++++...+++ +.. ..+|..+. .+..+.+.+..+ .
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~-----g~~---~~~d~~~~-~~~~~~~~~~~~-~ 224 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF-----GFD---DAFNYKEE-SDLTAALKRCFP-N 224 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS-----CCS---EEEETTSC-SCSHHHHHHHCT-T
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCc---eEEecCCH-HHHHHHHHHHhC-C
Confidence 5899999999999999999999999999999999988776543222 222 12466542 012223333222 3
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
.+|++|+|+|
T Consensus 225 ~~d~vi~~~g 234 (345)
T 2j3h_A 225 GIDIYFENVG 234 (345)
T ss_dssp CEEEEEESSC
T ss_pred CCcEEEECCC
Confidence 5889999998
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=98.23 E-value=5.4e-06 Score=74.98 Aligned_cols=80 Identities=19% Similarity=0.316 Sum_probs=61.4
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++|+|+||+||||.+.++.+...|++|+.++++.++++.. +++ +.. ..+|..++ +..+.+.+..+..
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~-----ga~---~~~~~~~~--~~~~~~~~~~~~~ 216 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-KEY-----GAE---YLINASKE--DILRQVLKFTNGK 216 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT-----TCS---EEEETTTS--CHHHHHHHHTTTS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc-----CCc---EEEeCCCc--hHHHHHHHHhCCC
Confidence 589999999999999999999999999999999998887633 222 221 12455554 5666777766665
Q ss_pred CeEEEEEccCC
Q 020854 132 DVGVLINNVGI 142 (320)
Q Consensus 132 ~id~lI~nAG~ 142 (320)
.+|++|+|+|.
T Consensus 217 g~D~vid~~g~ 227 (334)
T 3qwb_A 217 GVDASFDSVGK 227 (334)
T ss_dssp CEEEEEECCGG
T ss_pred CceEEEECCCh
Confidence 78999999984
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=98.22 E-value=7.3e-06 Score=74.54 Aligned_cols=80 Identities=16% Similarity=0.190 Sum_probs=58.4
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKT-GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~-G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|++|+||||+||||.++++.+... |++|+++++++++++.. +++ +.. ..+|..+. +..+++.+..+.
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~--~~~~~~~~~~~~ 238 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-KRA-----GAD---YVINASMQ--DPLAEIRRITES 238 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-HHH-----TCS---EEEETTTS--CHHHHHHHHTTT
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh-----CCC---EEecCCCc--cHHHHHHHHhcC
Confidence 4899999999999999999999999 99999999998877654 233 222 12465554 444555554431
Q ss_pred CCeEEEEEccCC
Q 020854 131 LDVGVLINNVGI 142 (320)
Q Consensus 131 ~~id~lI~nAG~ 142 (320)
..+|++|+|+|.
T Consensus 239 ~~~d~vi~~~g~ 250 (347)
T 1jvb_A 239 KGVDAVIDLNNS 250 (347)
T ss_dssp SCEEEEEESCCC
T ss_pred CCceEEEECCCC
Confidence 268899999984
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=98.22 E-value=2.7e-06 Score=74.82 Aligned_cols=77 Identities=14% Similarity=0.246 Sum_probs=56.6
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
.+.||+++|+|+ ||+|+++++.|++.|++|++++|+.++++++.+++...+ .+ +..+. ++ +.+ +
T Consensus 116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~---~~-----~~~~~-~~----~~~--~ 179 (271)
T 1nyt_A 116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG---SI-----QALSM-DE----LEG--H 179 (271)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS---SE-----EECCS-GG----GTT--C
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccC---Ce-----eEecH-HH----hcc--C
Confidence 456999999998 799999999999999999999999999888877664321 12 22221 11 111 3
Q ss_pred CCCeEEEEEccCCCC
Q 020854 130 GLDVGVLINNVGISY 144 (320)
Q Consensus 130 ~~~id~lI~nAG~~~ 144 (320)
+.|+||||+|...
T Consensus 180 --~~DivVn~t~~~~ 192 (271)
T 1nyt_A 180 --EFDLIINATSSGI 192 (271)
T ss_dssp --CCSEEEECCSCGG
T ss_pred --CCCEEEECCCCCC
Confidence 4669999999754
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=98.20 E-value=4.7e-06 Score=73.66 Aligned_cols=81 Identities=19% Similarity=0.359 Sum_probs=60.2
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
+++||+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++++++...++...+... +.. + +.+.+
T Consensus 124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~--~~~-~-------l~~~l 192 (283)
T 3jyo_A 124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGV--DAR-G-------IEDVI 192 (283)
T ss_dssp TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEE--CST-T-------HHHHH
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEc--CHH-H-------HHHHH
Confidence 466999999998 8999999999999999 7999999999999999988776544444332 221 1 12223
Q ss_pred cCCCeEEEEEccCCC
Q 020854 129 EGLDVGVLINNVGIS 143 (320)
Q Consensus 129 ~~~~id~lI~nAG~~ 143 (320)
...| +|||+....
T Consensus 193 ~~~D--iVInaTp~G 205 (283)
T 3jyo_A 193 AAAD--GVVNATPMG 205 (283)
T ss_dssp HHSS--EEEECSSTT
T ss_pred hcCC--EEEECCCCC
Confidence 3334 899887653
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=8.1e-06 Score=73.54 Aligned_cols=104 Identities=19% Similarity=0.319 Sum_probs=75.8
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++|+|+||+||+|.+.++.+...|++|+.+++++++++... ++ +.. ..+|..+. +..+.+.+..+..
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~-----Ga~---~~~~~~~~--~~~~~~~~~~~~~ 208 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-AL-----GAW---ETIDYSHE--DVAKRVLELTDGK 208 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH-----TCS---EEEETTTS--CHHHHHHHHTTTC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCC---EEEeCCCc--cHHHHHHHHhCCC
Confidence 5899999999999999999999999999999999998876443 23 221 12455554 5667777766666
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccc
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAA 196 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~ 196 (320)
.+|++|+|+|.. ..+.+++.+ ++.|+++.+++..+
T Consensus 209 g~Dvvid~~g~~----------------------------~~~~~~~~l--~~~G~iv~~g~~~~ 243 (325)
T 3jyn_A 209 KCPVVYDGVGQD----------------------------TWLTSLDSV--APRGLVVSFGNASG 243 (325)
T ss_dssp CEEEEEESSCGG----------------------------GHHHHHTTE--EEEEEEEECCCTTC
T ss_pred CceEEEECCChH----------------------------HHHHHHHHh--cCCCEEEEEecCCC
Confidence 799999999841 112334444 35699999987654
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.19 E-value=2.7e-06 Score=80.26 Aligned_cols=78 Identities=13% Similarity=0.255 Sum_probs=57.4
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
++++++||| +||+|+++++.|++.|++|++++|+.++.++..+++ ..+..+.+|++|. +.++ +.+.
T Consensus 2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~------~~~~~~~~Dv~d~--~~l~---~~l~-- 67 (450)
T 1ff9_A 2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV------QHSTPISLDVNDD--AALD---AEVA-- 67 (450)
T ss_dssp CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC------TTEEEEECCTTCH--HHHH---HHHT--
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc------CCceEEEeecCCH--HHHH---HHHc--
Confidence 378899997 799999999999999999999999988766543322 1256778898864 3333 3334
Q ss_pred CeEEEEEccCCC
Q 020854 132 DVGVLINNVGIS 143 (320)
Q Consensus 132 ~id~lI~nAG~~ 143 (320)
++|+|||++|..
T Consensus 68 ~~DvVIn~a~~~ 79 (450)
T 1ff9_A 68 KHDLVISLIPYT 79 (450)
T ss_dssp TSSEEEECCC--
T ss_pred CCcEEEECCccc
Confidence 466999999864
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.16 E-value=1.2e-05 Score=73.28 Aligned_cols=79 Identities=18% Similarity=0.305 Sum_probs=59.5
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++|+|+||+||||.+.++.+...|++|+++++++++++... ++ +.. ..+|..+. +..+.+.+.. ..
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~---~~~~~~~~--~~~~~~~~~~-~~ 234 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RL-----GAK---RGINYRSE--DFAAVIKAET-GQ 234 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH-----TCS---EEEETTTS--CHHHHHHHHH-SS
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc-----CCC---EEEeCCch--HHHHHHHHHh-CC
Confidence 5899999999999999999999999999999999998876543 23 222 12455554 4455555555 44
Q ss_pred CeEEEEEccCC
Q 020854 132 DVGVLINNVGI 142 (320)
Q Consensus 132 ~id~lI~nAG~ 142 (320)
.+|++|+|+|.
T Consensus 235 g~Dvvid~~g~ 245 (353)
T 4dup_A 235 GVDIILDMIGA 245 (353)
T ss_dssp CEEEEEESCCG
T ss_pred CceEEEECCCH
Confidence 68899999983
|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
Probab=98.16 E-value=1.2e-06 Score=70.54 Aligned_cols=76 Identities=11% Similarity=0.061 Sum_probs=53.9
Q ss_pred CcHHHHHHHHHHHcCCeEEEEeCCHHHHH---HHHHHHHhhcCCceEEEEEEeCCCCc----HHHHHHHHHHHcCCCeEE
Q 020854 63 DGIGKSFAFQLAKTGLNLVLVGRNPDKLK---DVSDSIQAKYAKTQIKSVVVDFSGDL----DEGVERIKEAIEGLDVGV 135 (320)
Q Consensus 63 ~GIG~ala~~l~~~G~~Vil~~r~~~~~~---~~~~~l~~~~~~~~~~~~~~D~~~~~----~~~~~~~~~~~~~~~id~ 135 (320)
+-++.+.++.|++.|++|++..|+.+... +..+.+.+. +.+...+++|+++.. ++.++.+.+.+++ |+
T Consensus 26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~--G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~---dV 100 (157)
T 3gxh_A 26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQA--GMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK---DV 100 (157)
T ss_dssp BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHT--TCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS---CE
T ss_pred CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHc--CCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC---CE
Confidence 35779999999999999999998765432 233444443 567888999999863 3444555555554 59
Q ss_pred EEEccCCC
Q 020854 136 LINNVGIS 143 (320)
Q Consensus 136 lI~nAG~~ 143 (320)
||||||+.
T Consensus 101 LVnnAgg~ 108 (157)
T 3gxh_A 101 LVHCLANY 108 (157)
T ss_dssp EEECSBSH
T ss_pred EEECCCCC
Confidence 99999964
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=98.14 E-value=8.9e-06 Score=73.74 Aligned_cols=80 Identities=23% Similarity=0.271 Sum_probs=61.2
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++|+|+||+||+|.+.++.+...|++|+.++++.++++...+ + +... .+|..+. +..+.+.+..+..
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l-----ga~~---~~~~~~~--~~~~~~~~~~~~~ 212 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-L-----GAAY---VIDTSTA--PLYETVMELTNGI 212 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H-----TCSE---EEETTTS--CHHHHHHHHTTTS
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-C-----CCcE---EEeCCcc--cHHHHHHHHhCCC
Confidence 58999999999999999999998999999999999888765432 3 2221 2355554 5566777766665
Q ss_pred CeEEEEEccCC
Q 020854 132 DVGVLINNVGI 142 (320)
Q Consensus 132 ~id~lI~nAG~ 142 (320)
.+|++|+|+|.
T Consensus 213 g~Dvvid~~g~ 223 (340)
T 3gms_A 213 GADAAIDSIGG 223 (340)
T ss_dssp CEEEEEESSCH
T ss_pred CCcEEEECCCC
Confidence 78999999983
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=98.08 E-value=2e-05 Score=71.48 Aligned_cols=79 Identities=22% Similarity=0.315 Sum_probs=59.3
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++|+|+||+||||.+.++.+...|++|+.++++.++.+... ++ +... . .|.. + +..+.+.+..+..
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~-----ga~~-v--~~~~-~--~~~~~v~~~~~~~ 226 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK-SV-----GADI-V--LPLE-E--GWAKAVREATGGA 226 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HH-----TCSE-E--EESS-T--THHHHHHHHTTTS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc-----CCcE-E--ecCc-h--hHHHHHHHHhCCC
Confidence 5899999999999999999999999999999999988875433 23 2221 1 2433 2 4556666666665
Q ss_pred CeEEEEEccCC
Q 020854 132 DVGVLINNVGI 142 (320)
Q Consensus 132 ~id~lI~nAG~ 142 (320)
.+|++|+++|.
T Consensus 227 g~Dvvid~~g~ 237 (342)
T 4eye_A 227 GVDMVVDPIGG 237 (342)
T ss_dssp CEEEEEESCC-
T ss_pred CceEEEECCch
Confidence 78999999984
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=98.07 E-value=5.4e-05 Score=68.32 Aligned_cols=153 Identities=17% Similarity=0.109 Sum_probs=97.3
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCC-------eEEEEeCC----HHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGL-------NLVLVGRN----PDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGV 121 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~-------~Vil~~r~----~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~ 121 (320)
...++||||+|.+|..++..|+.+|. +|++++++ +++++..+.++.... ..+. ..+..+++
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~--~~~~-~~i~~~~~----- 76 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCA--FPLL-AGMTAHAD----- 76 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTT--CTTE-EEEEEESS-----
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhc--cccc-CcEEEecC-----
Confidence 35799999999999999999999885 79999999 666666566665421 1111 12222222
Q ss_pred HHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccc----
Q 020854 122 ERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAI---- 197 (320)
Q Consensus 122 ~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~---- 197 (320)
..+.+.+ .|+||+.||.... + ..+. .+.+..|+.....+++.+..+- .+.++||++|.-...
T Consensus 77 --~~~al~~--aD~Vi~~ag~~~~---~--g~~r---~dl~~~N~~i~~~i~~~i~~~~--~p~a~ii~~SNPv~~~t~~ 142 (329)
T 1b8p_A 77 --PMTAFKD--ADVALLVGARPRG---P--GMER---KDLLEANAQIFTVQGKAIDAVA--SRNIKVLVVGNPANTNAYI 142 (329)
T ss_dssp --HHHHTTT--CSEEEECCCCCCC---T--TCCH---HHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHH
T ss_pred --cHHHhCC--CCEEEEeCCCCCC---C--CCCH---HHHHHHHHHHHHHHHHHHHHhc--CCCeEEEEccCchHHHHHH
Confidence 2333444 4499999997542 1 2233 3456888888888888765431 146799999874421
Q ss_pred ---ccCCCCCchhhHHHHHHHHHHHHHHHHHHc
Q 020854 198 ---VIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227 (320)
Q Consensus 198 ---~~~~~~~~~~Y~asKaal~~~~~~l~~el~ 227 (320)
..++.|..-.|+.++.--..+...++..+.
T Consensus 143 ~~~~~~~~p~~~v~g~t~Ld~~r~~~~la~~lg 175 (329)
T 1b8p_A 143 AMKSAPSLPAKNFTAMLRLDHNRALSQIAAKTG 175 (329)
T ss_dssp HHHTCTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred HHHHcCCCCHHHEEEeecHHHHHHHHHHHHHhC
Confidence 111233334577776655666677777664
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=98.07 E-value=1.4e-05 Score=73.15 Aligned_cols=100 Identities=21% Similarity=0.295 Sum_probs=67.6
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH---HHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP---DKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA 127 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 127 (320)
++|++|+|+|| ||+|...++.+...|++|+.++++. ++.+. .+++ +.. .+ | .++ ..+++.+
T Consensus 179 ~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~~~~-----ga~--~v--~-~~~---~~~~~~~- 242 (366)
T 2cdc_A 179 LNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTV-IEET-----KTN--YY--N-SSN---GYDKLKD- 242 (366)
T ss_dssp STTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHH-HHHH-----TCE--EE--E-CTT---CSHHHHH-
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHH-HHHh-----CCc--ee--c-hHH---HHHHHHH-
Confidence 45999999999 9999999999999999999999987 66543 2333 222 22 4 332 2233333
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHH-HHHhHhhhcCCCcEEEEEcCccc
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT-QAVLPGMLKRKKGAIVNIGSGAA 196 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~-~~~~~~l~~~~~g~Iv~vsS~~~ 196 (320)
.+ ..+|++|+++|... .+ +.+++.+. +.|+||+++...+
T Consensus 243 ~~-~~~d~vid~~g~~~---------------------------~~~~~~~~~l~--~~G~iv~~g~~~~ 282 (366)
T 2cdc_A 243 SV-GKFDVIIDATGADV---------------------------NILGNVIPLLG--RNGVLGLFGFSTS 282 (366)
T ss_dssp HH-CCEEEEEECCCCCT---------------------------HHHHHHGGGEE--EEEEEEECSCCCS
T ss_pred hC-CCCCEEEECCCChH---------------------------HHHHHHHHHHh--cCCEEEEEecCCC
Confidence 23 35889999998421 22 55566663 4689999977543
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.05 E-value=8e-06 Score=77.24 Aligned_cols=80 Identities=16% Similarity=0.259 Sum_probs=56.9
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKT-GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA 127 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~-G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 127 (320)
.+++++.++|+|+ ||+|+++++.|++. |++|++++|+.++++++.++ . + +..+.+|+.|. +.+ .+.
T Consensus 19 ~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~----~-~--~~~~~~D~~d~--~~l---~~~ 85 (467)
T 2axq_A 19 GRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP----S-G--SKAISLDVTDD--SAL---DKV 85 (467)
T ss_dssp ----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG----G-T--CEEEECCTTCH--HHH---HHH
T ss_pred cCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh----c-C--CcEEEEecCCH--HHH---HHH
Confidence 3466899999997 99999999999998 78999999999887765432 1 2 34566787764 223 333
Q ss_pred HcCCCeEEEEEccCCC
Q 020854 128 IEGLDVGVLINNVGIS 143 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~ 143 (320)
+.+ +|+|||+++..
T Consensus 86 l~~--~DvVIn~tp~~ 99 (467)
T 2axq_A 86 LAD--NDVVISLIPYT 99 (467)
T ss_dssp HHT--SSEEEECSCGG
T ss_pred HcC--CCEEEECCchh
Confidence 333 55999999864
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=1.9e-05 Score=69.44 Aligned_cols=78 Identities=21% Similarity=0.286 Sum_probs=56.6
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++...+ .+.. .|..+- .+
T Consensus 115 ~~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~---~~~~--~~~~~~--------~~-- 178 (272)
T 1p77_A 115 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG---NIQA--VSMDSI--------PL-- 178 (272)
T ss_dssp CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS---CEEE--EEGGGC--------CC--
T ss_pred CCcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccC---CeEE--eeHHHh--------cc--
Confidence 3466999999998 899999999999999999999999999888887774321 2222 233111 00
Q ss_pred cCCCeEEEEEccCCCC
Q 020854 129 EGLDVGVLINNVGISY 144 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~ 144 (320)
+ +.|+|||+++...
T Consensus 179 ~--~~DivIn~t~~~~ 192 (272)
T 1p77_A 179 Q--TYDLVINATSAGL 192 (272)
T ss_dssp S--CCSEEEECCCC--
T ss_pred C--CCCEEEECCCCCC
Confidence 2 4569999998754
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=97.98 E-value=1.2e-05 Score=75.81 Aligned_cols=110 Identities=18% Similarity=0.219 Sum_probs=70.6
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC-----------cHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD-----------LDEG 120 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~-----------~~~~ 120 (320)
.|++|+|+||+||||.+.++.+...|++|++++++.++++.. +++ +....+..-+.|..+. .++.
T Consensus 220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~-~~l---Ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (447)
T 4a0s_A 220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV-RAL---GCDLVINRAELGITDDIADDPRRVVETGRKL 295 (447)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---TCCCEEEHHHHTCCTTGGGCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hhc---CCCEEEecccccccccccccccccchhhhHH
Confidence 589999999999999999999999999999999998887654 222 2111111101111110 0123
Q ss_pred HHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccc
Q 020854 121 VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAA 196 (320)
Q Consensus 121 ~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~ 196 (320)
.+.+.+.. ...+|++|+++|.. .+ +..++.+ +++|+||++++..+
T Consensus 296 ~~~v~~~~-g~g~Dvvid~~G~~-------------~~---------------~~~~~~l--~~~G~iv~~G~~~~ 340 (447)
T 4a0s_A 296 AKLVVEKA-GREPDIVFEHTGRV-------------TF---------------GLSVIVA--RRGGTVVTCGSSSG 340 (447)
T ss_dssp HHHHHHHH-SSCCSEEEECSCHH-------------HH---------------HHHHHHS--CTTCEEEESCCTTC
T ss_pred HHHHHHHh-CCCceEEEECCCch-------------HH---------------HHHHHHH--hcCCEEEEEecCCC
Confidence 45555555 33577999999831 01 3344444 46799999987655
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=3.7e-05 Score=68.71 Aligned_cols=84 Identities=18% Similarity=0.317 Sum_probs=60.4
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCC---HHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRN---PDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERI 124 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~ 124 (320)
.+++||+++|+|+ ||.|++++..|++.|+ +|++++|+ .++.+++++++.... +..+.. .+..+. +.+
T Consensus 144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~-~~~v~~--~~~~~l-----~~~ 214 (312)
T 3t4e_A 144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENT-DCVVTV--TDLADQ-----HAF 214 (312)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHS-SCEEEE--EETTCH-----HHH
T ss_pred CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhcc-CcceEE--echHhh-----hhh
Confidence 4567999999997 8999999999999998 89999999 888888888887654 222332 333321 112
Q ss_pred HHHHcCCCeEEEEEccCCC
Q 020854 125 KEAIEGLDVGVLINNVGIS 143 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~~ 143 (320)
.+.+...| +|||+.+..
T Consensus 215 ~~~l~~~D--iIINaTp~G 231 (312)
T 3t4e_A 215 TEALASAD--ILTNGTKVG 231 (312)
T ss_dssp HHHHHHCS--EEEECSSTT
T ss_pred HhhccCce--EEEECCcCC
Confidence 23334334 899887654
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.97 E-value=2e-05 Score=61.75 Aligned_cols=74 Identities=15% Similarity=0.243 Sum_probs=54.5
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
+++++|+|+ |.+|.++++.|.++|++|+++++++++.+...+ . ....+..|.++. +.+++ .+-.+
T Consensus 6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~----~~~~~~gd~~~~--~~l~~----~~~~~ 70 (141)
T 3llv_A 6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----E----GFDAVIADPTDE--SFYRS----LDLEG 70 (141)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T----TCEEEECCTTCH--HHHHH----SCCTT
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----C----CCcEEECCCCCH--HHHHh----CCccc
Confidence 578999998 779999999999999999999999987665432 1 245677888875 33322 23224
Q ss_pred eEEEEEccC
Q 020854 133 VGVLINNVG 141 (320)
Q Consensus 133 id~lI~nAG 141 (320)
.|++|.+.+
T Consensus 71 ~d~vi~~~~ 79 (141)
T 3llv_A 71 VSAVLITGS 79 (141)
T ss_dssp CSEEEECCS
T ss_pred CCEEEEecC
Confidence 568887765
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=97.96 E-value=3.7e-05 Score=67.75 Aligned_cols=76 Identities=18% Similarity=0.243 Sum_probs=57.3
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA 127 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 127 (320)
.+++||+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++++++...+ .+... +..+-
T Consensus 122 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~---~~~~~--~~~~l----------- 184 (281)
T 3o8q_A 122 VLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG---EVKAQ--AFEQL----------- 184 (281)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS---CEEEE--EGGGC-----------
T ss_pred CCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC---CeeEe--eHHHh-----------
Confidence 4567999999998 7999999999999996 99999999999998888875432 23332 22211
Q ss_pred HcCCCeEEEEEccCCC
Q 020854 128 IEGLDVGVLINNVGIS 143 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~ 143 (320)
. .+.|+|||+.+..
T Consensus 185 -~-~~aDiIInaTp~g 198 (281)
T 3o8q_A 185 -K-QSYDVIINSTSAS 198 (281)
T ss_dssp -C-SCEEEEEECSCCC
T ss_pred -c-CCCCEEEEcCcCC
Confidence 1 2577999987654
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=97.95 E-value=7e-05 Score=68.00 Aligned_cols=104 Identities=14% Similarity=0.188 Sum_probs=72.1
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|++|+|+|+ |++|...++.+...|+ +|+.+++++++++... ++ +... .+|..++ +..+++.+..+.
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~-----Ga~~---~~~~~~~--~~~~~v~~~~~g 234 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KV-----GADY---VINPFEE--DVVKEVMDITDG 234 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HH-----TCSE---EECTTTS--CHHHHHHHHTTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-----CCCE---EECCCCc--CHHHHHHHHcCC
Confidence 6999999999 9999999999989999 9999999988765432 33 2211 2354443 445566555554
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccc
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAA 196 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~ 196 (320)
..+|++|+++|.. + ..+.+++.+ ++.|+++.+++..+
T Consensus 235 ~g~D~vid~~g~~------------~---------------~~~~~~~~l--~~~G~iv~~g~~~~ 271 (348)
T 2d8a_A 235 NGVDVFLEFSGAP------------K---------------ALEQGLQAV--TPAGRVSLLGLYPG 271 (348)
T ss_dssp SCEEEEEECSCCH------------H---------------HHHHHHHHE--EEEEEEEECCCCSS
T ss_pred CCCCEEEECCCCH------------H---------------HHHHHHHHH--hcCCEEEEEccCCC
Confidence 4688999999831 0 124445555 34689999987543
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=1.4e-05 Score=62.36 Aligned_cols=76 Identities=17% Similarity=0.265 Sum_probs=51.9
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
++++.++|+|+ |++|..+++.|.+.|++|++++++.++.+... +. + ...+..|.++. +.+++. .++
T Consensus 4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~----~~--~--~~~~~~d~~~~--~~l~~~--~~~- 69 (144)
T 2hmt_A 4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SY--A--THAVIANATEE--NELLSL--GIR- 69 (144)
T ss_dssp --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT----TT--C--SEEEECCTTCH--HHHHTT--TGG-
T ss_pred CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----Hh--C--CEEEEeCCCCH--HHHHhc--CCC-
Confidence 34778999998 99999999999999999999999987654321 11 1 24456676653 222211 133
Q ss_pred CCeEEEEEccC
Q 020854 131 LDVGVLINNVG 141 (320)
Q Consensus 131 ~~id~lI~nAG 141 (320)
+.|++|++++
T Consensus 70 -~~d~vi~~~~ 79 (144)
T 2hmt_A 70 -NFEYVIVAIG 79 (144)
T ss_dssp -GCSEEEECCC
T ss_pred -CCCEEEECCC
Confidence 3559998887
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=97.91 E-value=6.9e-05 Score=67.96 Aligned_cols=76 Identities=17% Similarity=0.258 Sum_probs=56.5
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++|+|+||+||+|...++.+...|++|+.+ ++.++++.. +++ +... +| .++ +..+.+.+..+..
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~l-----Ga~~----i~-~~~--~~~~~~~~~~~~~ 215 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RDL-----GATP----ID-ASR--EPEDYAAEHTAGQ 215 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HHH-----TSEE----EE-TTS--CHHHHHHHHHTTS
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HHc-----CCCE----ec-cCC--CHHHHHHHHhcCC
Confidence 58999999999999999999999999999999 777775533 333 3222 45 333 4445566656655
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
.+|++++++|
T Consensus 216 g~D~vid~~g 225 (343)
T 3gaz_A 216 GFDLVYDTLG 225 (343)
T ss_dssp CEEEEEESSC
T ss_pred CceEEEECCC
Confidence 7899999998
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=5.7e-05 Score=69.06 Aligned_cols=103 Identities=17% Similarity=0.184 Sum_probs=70.4
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++|+|+||+||+|...++.+...|++|+.+++++++++...+ + +... .+|..++ +..+.+.+..+ .
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~-----Ga~~---~~~~~~~--~~~~~~~~~~~-~ 230 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-L-----GCDR---PINYKTE--PVGTVLKQEYP-E 230 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-T-----TCSE---EEETTTS--CHHHHHHHHCT-T
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-c-----CCcE---EEecCCh--hHHHHHHHhcC-C
Confidence 48999999999999999999999999999999999887664432 2 2221 2354443 33444444333 3
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccc
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAA 196 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~ 196 (320)
.+|++|+++|. . ..+.+++.+. +.|++|.+++..+
T Consensus 231 g~D~vid~~g~--~--------------------------~~~~~~~~l~--~~G~iv~~g~~~~ 265 (362)
T 2c0c_A 231 GVDVVYESVGG--A--------------------------MFDLAVDALA--TKGRLIVIGFISG 265 (362)
T ss_dssp CEEEEEECSCT--H--------------------------HHHHHHHHEE--EEEEEEECCCGGG
T ss_pred CCCEEEECCCH--H--------------------------HHHHHHHHHh--cCCEEEEEeCCCC
Confidence 68899999882 0 0123444453 4689999988654
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.86 E-value=4.5e-05 Score=69.32 Aligned_cols=104 Identities=13% Similarity=0.145 Sum_probs=72.1
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
+++++|+||+||+|...++.+...|++|+.++++.++++... ++ +.. ..+|..++ +..+.+.+..+...
T Consensus 165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~-----Ga~---~~~~~~~~--~~~~~v~~~~~~~g 233 (349)
T 3pi7_A 165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DI-----GAA---HVLNEKAP--DFEATLREVMKAEQ 233 (349)
T ss_dssp CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HH-----TCS---EEEETTST--THHHHHHHHHHHHC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCC---EEEECCcH--HHHHHHHHHhcCCC
Confidence 489999999999999999999999999999999998876543 23 222 12355443 45566666554335
Q ss_pred eEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccc
Q 020854 133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAI 197 (320)
Q Consensus 133 id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~ 197 (320)
+|++++++|.. . ++.+++.+ ++.|+++.+++..+.
T Consensus 234 ~D~vid~~g~~-------------~---------------~~~~~~~l--~~~G~iv~~G~~~~~ 268 (349)
T 3pi7_A 234 PRIFLDAVTGP-------------L---------------ASAIFNAM--PKRARWIIYGRLDPD 268 (349)
T ss_dssp CCEEEESSCHH-------------H---------------HHHHHHHS--CTTCEEEECCCSCCS
T ss_pred CcEEEECCCCh-------------h---------------HHHHHhhh--cCCCEEEEEeccCCC
Confidence 77999998831 0 02234444 467999999876543
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=97.75 E-value=4.9e-05 Score=65.85 Aligned_cols=83 Identities=20% Similarity=0.299 Sum_probs=63.2
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCH-------------------HHHHHHHHHHHhhcCCceEEEE
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP-------------------DKLKDVSDSIQAKYAKTQIKSV 109 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~ 109 (320)
++++++|+|.|+ ||+|.++++.|+..|. +|++++++. .+.+..++.+.+.++...+..+
T Consensus 28 ~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~ 106 (249)
T 1jw9_B 28 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV 106 (249)
T ss_dssp HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence 466899999996 7999999999999997 899999987 7888888889888777777766
Q ss_pred EEeCCCCcHHHHHHHHHHHcCCCeEEEEEccC
Q 020854 110 VVDFSGDLDEGVERIKEAIEGLDVGVLINNVG 141 (320)
Q Consensus 110 ~~D~~~~~~~~~~~~~~~~~~~~id~lI~nAG 141 (320)
..++.+ + .+.+.+...| +||.+.+
T Consensus 107 ~~~~~~---~---~~~~~~~~~D--vVi~~~d 130 (249)
T 1jw9_B 107 NALLDD---A---ELAALIAEHD--LVLDCTD 130 (249)
T ss_dssp CSCCCH---H---HHHHHHHTSS--EEEECCS
T ss_pred eccCCH---h---HHHHHHhCCC--EEEEeCC
Confidence 555542 2 2233344444 8887754
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=97.72 E-value=0.0002 Score=64.94 Aligned_cols=77 Identities=13% Similarity=0.158 Sum_probs=56.5
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++|+|+||+|++|...++.+...|++|+.++++.++++...+ + +... .+|..+ +..+.+.+. ...
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~~---vi~~~~---~~~~~~~~~-~~~ 216 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-M-----GADI---VLNHKE---SLLNQFKTQ-GIE 216 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-H-----TCSE---EECTTS---CHHHHHHHH-TCC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c-----CCcE---EEECCc---cHHHHHHHh-CCC
Confidence 58999999999999999999999999999999999887665432 3 2211 123333 344555554 444
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
.+|++++++|
T Consensus 217 g~Dvv~d~~g 226 (346)
T 3fbg_A 217 LVDYVFCTFN 226 (346)
T ss_dssp CEEEEEESSC
T ss_pred CccEEEECCC
Confidence 6899999988
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00028 Score=64.03 Aligned_cols=79 Identities=24% Similarity=0.252 Sum_probs=54.7
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCC-CcHHHHHHHHHHHc-
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG-DLDEGVERIKEAIE- 129 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~- 129 (320)
.|++|+|+|+ ||+|...++.+...|++|+.+++++++++... ++ +.. .. +|..+ . +..+++.+..+
T Consensus 168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~-~~--~~~~~~~--~~~~~i~~~~~~ 235 (352)
T 1e3j_A 168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NC-----GAD-VT--LVVDPAK--EEESSIIERIRS 235 (352)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HT-----TCS-EE--EECCTTT--SCHHHHHHHHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-Hh-----CCC-EE--EcCcccc--cHHHHHHHHhcc
Confidence 4899999997 89999999988889999999999988766432 22 222 22 34442 2 33455555444
Q ss_pred --CCCeEEEEEccCC
Q 020854 130 --GLDVGVLINNVGI 142 (320)
Q Consensus 130 --~~~id~lI~nAG~ 142 (320)
...+|++|+++|.
T Consensus 236 ~~g~g~D~vid~~g~ 250 (352)
T 1e3j_A 236 AIGDLPNVTIDCSGN 250 (352)
T ss_dssp HSSSCCSEEEECSCC
T ss_pred ccCCCCCEEEECCCC
Confidence 3356799999883
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=97.70 E-value=0.0002 Score=64.74 Aligned_cols=102 Identities=23% Similarity=0.321 Sum_probs=69.8
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++|+|+|| ||+|...++.+...|++|+.+++++++++... ++ +.. ..+|..++ +..+.+.+..+
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~---~~~d~~~~--~~~~~~~~~~~-- 229 (339)
T 1rjw_A 164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-EL-----GAD---LVVNPLKE--DAAKFMKEKVG-- 229 (339)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HT-----TCS---EEECTTTS--CHHHHHHHHHS--
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HC-----CCC---EEecCCCc--cHHHHHHHHhC--
Confidence 4889999999 88999999999999999999999988876542 22 222 12466543 34444544443
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccc
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAA 196 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~ 196 (320)
.+|++|+++|.. + ..+..++.+ ++.|+++.+++..+
T Consensus 230 ~~d~vid~~g~~------------~---------------~~~~~~~~l--~~~G~~v~~g~~~~ 265 (339)
T 1rjw_A 230 GVHAAVVTAVSK------------P---------------AFQSAYNSI--RRGGACVLVGLPPE 265 (339)
T ss_dssp SEEEEEESSCCH------------H---------------HHHHHHHHE--EEEEEEEECCCCSS
T ss_pred CCCEEEECCCCH------------H---------------HHHHHHHHh--hcCCEEEEecccCC
Confidence 588999999831 0 124444545 34689999987543
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00013 Score=64.90 Aligned_cols=78 Identities=15% Similarity=0.260 Sum_probs=56.5
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
++.|++++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++++++.... . .+ .+ .+.+.+.+
T Consensus 138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~-~-~~----~~--------~~~~~~~~ 202 (297)
T 2egg_A 138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERR-S-AY----FS--------LAEAETRL 202 (297)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSS-C-CE----EC--------HHHHHHTG
T ss_pred CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhcc-C-ce----ee--------HHHHHhhh
Confidence 466999999998 7999999999999998 99999999998887776552210 0 11 11 12344445
Q ss_pred cCCCeEEEEEccCCCC
Q 020854 129 EGLDVGVLINNVGISY 144 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~ 144 (320)
.+ .|+|||+.+...
T Consensus 203 ~~--aDivIn~t~~~~ 216 (297)
T 2egg_A 203 AE--YDIIINTTSVGM 216 (297)
T ss_dssp GG--CSEEEECSCTTC
T ss_pred cc--CCEEEECCCCCC
Confidence 54 449999998654
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00087 Score=60.29 Aligned_cols=117 Identities=18% Similarity=0.300 Sum_probs=72.6
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G--~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
...++||||+|.+|..++..|+++| .+|++++++++ +....++........+.. +.+. ....+.+.+
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~----~~~t-----~d~~~al~g 76 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVVRG----FLGQ-----QQLEAALTG 76 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEE----EESH-----HHHHHHHTT
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceEEE----EeCC-----CCHHHHcCC
Confidence 3569999999999999999999998 78999998876 333344443211112221 1111 233344554
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcC
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGS 193 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS 193 (320)
.| ++|+.||.... + ..+. .+.+..|+.+...+.+.+... ..++.|+++|.
T Consensus 77 aD--vVi~~ag~~~~---~--g~~r---~dl~~~N~~~~~~i~~~i~~~---~p~~~viv~SN 126 (326)
T 1smk_A 77 MD--LIIVPAGVPRK---P--GMTR---DDLFKINAGIVKTLCEGIAKC---CPRAIVNLISN 126 (326)
T ss_dssp CS--EEEECCCCCCC---S--SCCC---SHHHHHHHHHHHHHHHHHHHH---CTTSEEEECCS
T ss_pred CC--EEEEcCCcCCC---C--CCCH---HHHHHHHHHHHHHHHHHHHhh---CCCeEEEEECC
Confidence 45 99999997542 1 1122 234678888888888877553 23455555443
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00047 Score=61.41 Aligned_cols=112 Identities=13% Similarity=0.174 Sum_probs=71.6
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCC--eEEEEeC--CHHHHHHHHHHHHhhc---CCceEEEEEEeCCCCcHHHHHHHHHH
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGL--NLVLVGR--NPDKLKDVSDSIQAKY---AKTQIKSVVVDFSGDLDEGVERIKEA 127 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~--~Vil~~r--~~~~~~~~~~~l~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~ 127 (320)
.++||||+|.+|..++..|+..|. +++++++ ++++++....++.... .+.++.. + +. +.
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~---~--~~---------~a 67 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ---G--GY---------ED 67 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE---C--CG---------GG
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe---C--CH---------HH
Confidence 589999999999999999998885 6999999 8877665555554431 1222222 2 11 11
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcC
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGS 193 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS 193 (320)
+. +.|++|+.||.... + ..+. .+.+..|+.+...+.+.+..+ ...+.|+++|.
T Consensus 68 ~~--~aDvVi~~ag~~~~---~--g~~r---~dl~~~N~~i~~~i~~~i~~~---~p~~~viv~SN 120 (303)
T 1o6z_A 68 TA--GSDVVVITAGIPRQ---P--GQTR---IDLAGDNAPIMEDIQSSLDEH---NDDYISLTTSN 120 (303)
T ss_dssp GT--TCSEEEECCCCCCC---T--TCCH---HHHHHHHHHHHHHHHHHHHTT---CSCCEEEECCS
T ss_pred hC--CCCEEEEcCCCCCC---C--CCCH---HHHHHHHHHHHHHHHHHHHHH---CCCcEEEEeCC
Confidence 33 35599999997542 1 2233 345788888888777776442 23455555433
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00018 Score=65.77 Aligned_cols=75 Identities=15% Similarity=0.231 Sum_probs=53.4
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++|+|+|+ ||+|...++.+...|++|+.++++.++.+...+++ +... .+|..+. + .+.+..+
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l-----Ga~~---v~~~~~~--~---~~~~~~~-- 250 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF-----GADS---FLVSRDQ--E---QMQAAAG-- 250 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS-----CCSE---EEETTCH--H---HHHHTTT--
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----CCce---EEeccCH--H---HHHHhhC--
Confidence 5899999996 99999999999999999999999988876544332 2221 2354432 2 2322223
Q ss_pred CeEEEEEccCC
Q 020854 132 DVGVLINNVGI 142 (320)
Q Consensus 132 ~id~lI~nAG~ 142 (320)
.+|++|+++|.
T Consensus 251 ~~D~vid~~g~ 261 (366)
T 1yqd_A 251 TLDGIIDTVSA 261 (366)
T ss_dssp CEEEEEECCSS
T ss_pred CCCEEEECCCc
Confidence 58899999985
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00026 Score=66.74 Aligned_cols=81 Identities=21% Similarity=0.310 Sum_probs=58.4
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC---------------
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--------------- 116 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--------------- 116 (320)
.|++|+|+||+||+|...++.+...|++|+++++++++++.+ +++ +... . +|..+.
T Consensus 228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~l-----Ga~~-v--i~~~~~d~~~~~~~~~~~~~~ 298 (456)
T 3krt_A 228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAM-----GAEA-I--IDRNAEGYRFWKDENTQDPKE 298 (456)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHH-----TCCE-E--EETTTTTCCSEEETTEECHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-Hhh-----CCcE-E--EecCcCcccccccccccchHH
Confidence 589999999999999999999989999999999988877644 333 2211 1 232221
Q ss_pred cHHHHHHHHHHHcCCCeEEEEEccC
Q 020854 117 LDEGVERIKEAIEGLDVGVLINNVG 141 (320)
Q Consensus 117 ~~~~~~~~~~~~~~~~id~lI~nAG 141 (320)
.++..+.+.+..++..+|++|.++|
T Consensus 299 ~~~~~~~i~~~t~g~g~Dvvid~~G 323 (456)
T 3krt_A 299 WKRFGKRIRELTGGEDIDIVFEHPG 323 (456)
T ss_dssp HHHHHHHHHHHHTSCCEEEEEECSC
T ss_pred HHHHHHHHHHHhCCCCCcEEEEcCC
Confidence 0234466666666567999999988
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00029 Score=64.39 Aligned_cols=77 Identities=16% Similarity=0.204 Sum_probs=54.7
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
+++++|+|+|+ ||+|+++++.+...|++|++++|+.++++...+.... .+.. +..+. +.+.+.+.+
T Consensus 165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~-----~~~~---~~~~~-----~~~~~~~~~ 230 (361)
T 1pjc_A 165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS-----RVEL---LYSNS-----AEIETAVAE 230 (361)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG-----GSEE---EECCH-----HHHHHHHHT
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc-----eeEe---eeCCH-----HHHHHHHcC
Confidence 56799999999 9999999999999999999999999888766543311 1211 11221 123334444
Q ss_pred CCeEEEEEccCCC
Q 020854 131 LDVGVLINNVGIS 143 (320)
Q Consensus 131 ~~id~lI~nAG~~ 143 (320)
.|++|+++|..
T Consensus 231 --~DvVI~~~~~~ 241 (361)
T 1pjc_A 231 --ADLLIGAVLVP 241 (361)
T ss_dssp --CSEEEECCCCT
T ss_pred --CCEEEECCCcC
Confidence 45999999864
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00093 Score=59.73 Aligned_cols=149 Identities=19% Similarity=0.237 Sum_probs=86.6
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCC--eEEEEeC--CHHHHHHHHHHHHhhcC--CceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGL--NLVLVGR--NPDKLKDVSDSIQAKYA--KTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~--~Vil~~r--~~~~~~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
.++||||+|.+|..++..|+.+|. .++++++ +.++++..+.++....+ +..+.....| |+ +.+.+
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~--d~-------l~~al 72 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES--DE-------NLRII 72 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE--TT-------CGGGG
T ss_pred EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC--cc-------hHHHh
Confidence 589999999999999999998884 5889999 77666654555543211 1112222212 10 11223
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccc------cCCC
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV------IPSD 202 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~------~~~~ 202 (320)
. +.|++|+.||.... + ..+. ...+..|+.+...+.+.+..+ . ++.|+++|.-.... .++.
T Consensus 73 ~--gaD~Vi~~Ag~~~~---~--g~~r---~dl~~~N~~i~~~i~~~i~~~---~-~~~vlv~SNPv~~~t~~~~k~~~~ 138 (313)
T 1hye_A 73 D--ESDVVIITSGVPRK---E--GMSR---MDLAKTNAKIVGKYAKKIAEI---C-DTKIFVITNPVDVMTYKALVDSKF 138 (313)
T ss_dssp T--TCSEEEECCSCCCC---T--TCCH---HHHHHHHHHHHHHHHHHHHHH---C-CCEEEECSSSHHHHHHHHHHHHCC
T ss_pred C--CCCEEEECCCCCCC---C--CCcH---HHHHHHHHHHHHHHHHHHHHh---C-CeEEEEecCcHHHHHHHHHHhhCc
Confidence 3 35599999997542 1 2233 345789999988888887653 2 45555555433321 0123
Q ss_pred CCchhhHH-HHHHHHHHHHHHHHHH
Q 020854 203 PLYSVYAA-TKAYIDQFSRSLYVEY 226 (320)
Q Consensus 203 ~~~~~Y~a-sKaal~~~~~~l~~el 226 (320)
|..-.++. +..-...+-..++..+
T Consensus 139 p~~rviG~gt~LD~~r~~~~la~~l 163 (313)
T 1hye_A 139 ERNQVFGLGTHLDSLRFKVAIAKFF 163 (313)
T ss_dssp CTTSEEECTTHHHHHHHHHHHHHHH
T ss_pred ChhcEEEeCccHHHHHHHHHHHHHh
Confidence 33334454 4444445555555555
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00054 Score=54.31 Aligned_cols=77 Identities=13% Similarity=0.222 Sum_probs=52.3
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCC-HHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-PDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
++.++|.|+ |.+|..++++|.+.|++|++++++ .++.+...+.. ...+..+..|.++. +..++. .+.+
T Consensus 3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-----~~~~~~i~gd~~~~--~~l~~a--~i~~- 71 (153)
T 1id1_A 3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-----GDNADVIPGDSNDS--SVLKKA--GIDR- 71 (153)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-----CTTCEEEESCTTSH--HHHHHH--TTTT-
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-----cCCCeEEEcCCCCH--HHHHHc--Chhh-
Confidence 467888886 999999999999999999999998 45544443322 22356777888765 222211 2344
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
.|.+|...+
T Consensus 72 -ad~vi~~~~ 80 (153)
T 1id1_A 72 -CRAILALSD 80 (153)
T ss_dssp -CSEEEECSS
T ss_pred -CCEEEEecC
Confidence 448887654
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00022 Score=62.53 Aligned_cols=50 Identities=16% Similarity=0.250 Sum_probs=44.5
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQ 98 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~ 98 (320)
..+++||+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++++++.
T Consensus 115 ~~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~ 165 (272)
T 3pwz_A 115 GEPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELD 165 (272)
T ss_dssp CCCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHC
T ss_pred CCCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhc
Confidence 34577999999998 7999999999999996 99999999999988887764
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00039 Score=53.74 Aligned_cols=74 Identities=24% Similarity=0.397 Sum_probs=50.1
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHH-HcCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA-IEGL 131 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~ 131 (320)
++.++|+|+ |.+|..+++.|.+.|++|++++|+++..+...+ .. + +..+..|..+. +. +.+. +.
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~----~~-~--~~~~~~d~~~~--~~---l~~~~~~-- 68 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASA----EI-D--ALVINGDCTKI--KT---LEDAGIE-- 68 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HC-S--SEEEESCTTSH--HH---HHHTTTT--
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH----hc-C--cEEEEcCCCCH--HH---HHHcCcc--
Confidence 457899987 999999999999999999999999877654432 11 2 33455666543 22 2221 23
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
+.|++|.+.+
T Consensus 69 ~~d~vi~~~~ 78 (140)
T 1lss_A 69 DADMYIAVTG 78 (140)
T ss_dssp TCSEEEECCS
T ss_pred cCCEEEEeeC
Confidence 3558888864
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00021 Score=63.42 Aligned_cols=42 Identities=21% Similarity=0.291 Sum_probs=38.1
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV 93 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~ 93 (320)
.|++|+|+||+||+|...++.+...|++|+.+++++++.+..
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~ 166 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP 166 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 489999999999999999999999999999999998876644
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00078 Score=61.41 Aligned_cols=78 Identities=17% Similarity=0.218 Sum_probs=58.0
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++|+|+| +|++|...++.+...|++|+.++++.++++.. +++ +.. . .+|-.++ +..+++.+..+..
T Consensus 189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l-----Ga~-~--vi~~~~~--~~~~~v~~~~~g~ 256 (363)
T 3uog_A 189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FAL-----GAD-H--GINRLEE--DWVERVYALTGDR 256 (363)
T ss_dssp TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH-----TCS-E--EEETTTS--CHHHHHHHHHTTC
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHc-----CCC-E--EEcCCcc--cHHHHHHHHhCCC
Confidence 589999999 89999999999888999999999998887653 333 222 1 2342212 4556666666665
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
.+|+++.++|
T Consensus 257 g~D~vid~~g 266 (363)
T 3uog_A 257 GADHILEIAG 266 (363)
T ss_dssp CEEEEEEETT
T ss_pred CceEEEECCC
Confidence 7899999998
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00058 Score=60.29 Aligned_cols=88 Identities=16% Similarity=0.261 Sum_probs=65.8
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCH------------------HHHHHHHHHHHhhcCCceEEEEE
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP------------------DKLKDVSDSIQAKYAKTQIKSVV 110 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~------------------~~~~~~~~~l~~~~~~~~~~~~~ 110 (320)
++++++|+|.|+ ||+|.++++.|+..|. ++.++|.+. .|.+..++.+++.+|..++..+.
T Consensus 33 kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~ 111 (292)
T 3h8v_A 33 KIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHN 111 (292)
T ss_dssp GGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEec
Confidence 466899999986 8999999999999996 899999876 67788888899998888888888
Q ss_pred EeCCCCcHHHHHHHHHHH--cC----CCeEEEEEcc
Q 020854 111 VDFSGDLDEGVERIKEAI--EG----LDVGVLINNV 140 (320)
Q Consensus 111 ~D~~~~~~~~~~~~~~~~--~~----~~id~lI~nA 140 (320)
.++++. +.++.+.+.+ +. .+.|+||.+.
T Consensus 112 ~~l~~~--~~~~~~~~~~~~~~l~~~~~~DlVid~~ 145 (292)
T 3h8v_A 112 YNITTV--ENFQHFMDRISNGGLEEGKPVDLVLSCV 145 (292)
T ss_dssp CCTTSH--HHHHHHHHHHHHBSSSTTBCCSEEEECC
T ss_pred ccCCcH--HHHHHHhhhhcccccccCCCCCEEEECC
Confidence 777653 3334443322 00 1355888654
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00044 Score=63.52 Aligned_cols=107 Identities=17% Similarity=0.202 Sum_probs=68.9
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
.+.|++|+|+|+ |+||.++++.+...|++|++++|+.++++...+.+ +..+ ..+..+. . .+.+.+.
T Consensus 165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~-----g~~~---~~~~~~~--~---~l~~~l~ 230 (377)
T 2vhw_A 165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF-----CGRI---HTRYSSA--Y---ELEGAVK 230 (377)
T ss_dssp TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----TTSS---EEEECCH--H---HHHHHHH
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc-----CCee---EeccCCH--H---HHHHHHc
Confidence 367999999998 99999999999999999999999998876654333 2222 1222222 2 2333334
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcc
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGA 195 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~ 195 (320)
+ .|++|++++.... ..+ ..+.+..++.| ++++.||++++..
T Consensus 231 ~--aDvVi~~~~~p~~-~t~--------------------~li~~~~l~~m--k~g~~iV~va~~~ 271 (377)
T 2vhw_A 231 R--ADLVIGAVLVPGA-KAP--------------------KLVSNSLVAHM--KPGAVLVDIAIDQ 271 (377)
T ss_dssp H--CSEEEECCCCTTS-CCC--------------------CCBCHHHHTTS--CTTCEEEEGGGGT
T ss_pred C--CCEEEECCCcCCC-CCc--------------------ceecHHHHhcC--CCCcEEEEEecCC
Confidence 4 4499998875321 000 01123445555 3568999998643
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00061 Score=62.41 Aligned_cols=76 Identities=20% Similarity=0.296 Sum_probs=51.5
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++|+|+||+||+|...++.+...|++|+.++ +.++.+.. +++ +... .+|..++ +..+++.+. +
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~-~~l-----Ga~~---v~~~~~~--~~~~~~~~~-~-- 247 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELV-RKL-----GADD---VIDYKSG--SVEEQLKSL-K-- 247 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHH-HHT-----TCSE---EEETTSS--CHHHHHHTS-C--
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHH-HHc-----CCCE---EEECCch--HHHHHHhhc-C--
Confidence 589999999999999999998888999999888 44554432 222 2221 2355443 333444331 2
Q ss_pred CeEEEEEccCC
Q 020854 132 DVGVLINNVGI 142 (320)
Q Consensus 132 ~id~lI~nAG~ 142 (320)
.+|++|+++|.
T Consensus 248 g~D~vid~~g~ 258 (375)
T 2vn8_A 248 PFDFILDNVGG 258 (375)
T ss_dssp CBSEEEESSCT
T ss_pred CCCEEEECCCC
Confidence 47799999984
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00056 Score=62.47 Aligned_cols=79 Identities=18% Similarity=0.306 Sum_probs=54.2
Q ss_pred cccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHH
Q 020854 47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKE 126 (320)
Q Consensus 47 ~~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 126 (320)
.++.-+...|+|.|| |++|+.+++.|++ .++|.+++++.+++++.. .....+.+|+.|. +.+.+
T Consensus 10 ~~~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~---------~~~~~~~~d~~d~-----~~l~~ 73 (365)
T 3abi_A 10 HHIEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK---------EFATPLKVDASNF-----DKLVE 73 (365)
T ss_dssp ------CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT---------TTSEEEECCTTCH-----HHHHH
T ss_pred ccccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh---------ccCCcEEEecCCH-----HHHHH
Confidence 455544556899998 9999999999875 579999999998876542 2345677888765 44555
Q ss_pred HHcCCCeEEEEEccCCC
Q 020854 127 AIEGLDVGVLINNVGIS 143 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~ 143 (320)
.+.+.| +|||+++..
T Consensus 74 ~~~~~D--vVi~~~p~~ 88 (365)
T 3abi_A 74 VMKEFE--LVIGALPGF 88 (365)
T ss_dssp HHTTCS--EEEECCCGG
T ss_pred HHhCCC--EEEEecCCc
Confidence 555545 999988753
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0018 Score=59.08 Aligned_cols=80 Identities=20% Similarity=0.225 Sum_probs=54.3
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|++|+|+|+ |++|...++.+...|+ +|+.+++++++++... ++ +.. . .+|..+..++..+.+.+..+.
T Consensus 190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~-~--vi~~~~~~~~~~~~v~~~~~~ 259 (373)
T 2fzw_A 190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EF-----GAT-E--CINPQDFSKPIQEVLIEMTDG 259 (373)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HH-----TCS-E--EECGGGCSSCHHHHHHHHTTS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc-----CCc-e--EeccccccccHHHHHHHHhCC
Confidence 4899999996 9999999988888999 7999999988876542 33 221 1 134332111344455544444
Q ss_pred CCeEEEEEccCC
Q 020854 131 LDVGVLINNVGI 142 (320)
Q Consensus 131 ~~id~lI~nAG~ 142 (320)
.+|++|.++|.
T Consensus 260 -g~D~vid~~g~ 270 (373)
T 2fzw_A 260 -GVDYSFECIGN 270 (373)
T ss_dssp -CBSEEEECSCC
T ss_pred -CCCEEEECCCc
Confidence 67799999883
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0016 Score=59.59 Aligned_cols=80 Identities=20% Similarity=0.279 Sum_probs=54.2
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|++|+|+|+ |++|...++.+...|+ +|+.+++++++++... ++ +.. . .+|..+..++..+.+.+..+.
T Consensus 192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~-~--vi~~~~~~~~~~~~~~~~~~~ 261 (374)
T 1cdo_A 192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VF-----GAT-D--FVNPNDHSEPISQVLSKMTNG 261 (374)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-----TCC-E--EECGGGCSSCHHHHHHHHHTS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hh-----CCc-e--EEeccccchhHHHHHHHHhCC
Confidence 4899999995 9999999998888999 7999999988876432 22 221 1 134432111334444444444
Q ss_pred CCeEEEEEccCC
Q 020854 131 LDVGVLINNVGI 142 (320)
Q Consensus 131 ~~id~lI~nAG~ 142 (320)
.+|++|+++|.
T Consensus 262 -g~D~vid~~g~ 272 (374)
T 1cdo_A 262 -GVDFSLECVGN 272 (374)
T ss_dssp -CBSEEEECSCC
T ss_pred -CCCEEEECCCC
Confidence 57799999884
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0005 Score=62.17 Aligned_cols=77 Identities=25% Similarity=0.321 Sum_probs=54.7
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|++|+|+|| ||+|...++.+...|+ +|+.+++++++++...+ + . . ..+|..++ +..+.+.+.. .
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l-a---~-----~v~~~~~~--~~~~~~~~~~-~ 229 (343)
T 2dq4_A 164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y-A---D-----RLVNPLEE--DLLEVVRRVT-G 229 (343)
T ss_dssp TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T-C---S-----EEECTTTS--CHHHHHHHHH-S
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-H---H-----hccCcCcc--CHHHHHHHhc-C
Confidence 6899999999 9999999998888999 99999999887653321 1 1 1 12344443 3444454443 3
Q ss_pred CCeEEEEEccCC
Q 020854 131 LDVGVLINNVGI 142 (320)
Q Consensus 131 ~~id~lI~nAG~ 142 (320)
..+|++|.++|.
T Consensus 230 ~g~D~vid~~g~ 241 (343)
T 2dq4_A 230 SGVEVLLEFSGN 241 (343)
T ss_dssp SCEEEEEECSCC
T ss_pred CCCCEEEECCCC
Confidence 368899999983
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00067 Score=52.98 Aligned_cols=73 Identities=16% Similarity=0.311 Sum_probs=51.4
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCe
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV 133 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 133 (320)
+.++|.|+ |.+|..+++.|.+.|++|+++++++++.++..+ . .+..+..|.++. +..++. ... +.
T Consensus 8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~----g~~~i~gd~~~~--~~l~~a--~i~--~a 72 (140)
T 3fwz_A 8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----R----GVRAVLGNAANE--EIMQLA--HLE--CA 72 (140)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T----TCEEEESCTTSH--HHHHHT--TGG--GC
T ss_pred CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----c----CCCEEECCCCCH--HHHHhc--Ccc--cC
Confidence 56788886 889999999999999999999999988765432 1 245677787765 322221 123 34
Q ss_pred EEEEEccC
Q 020854 134 GVLINNVG 141 (320)
Q Consensus 134 d~lI~nAG 141 (320)
|.+|...+
T Consensus 73 d~vi~~~~ 80 (140)
T 3fwz_A 73 KWLILTIP 80 (140)
T ss_dssp SEEEECCS
T ss_pred CEEEEECC
Confidence 48887654
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00064 Score=61.90 Aligned_cols=85 Identities=25% Similarity=0.268 Sum_probs=54.1
Q ss_pred CC-CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC-cHHHHHHHHHHH-
Q 020854 52 YG-SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD-LDEGVERIKEAI- 128 (320)
Q Consensus 52 ~g-k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~- 128 (320)
.| ++|+|+||+|++|...++-+...|++|+.++++.+++++..+.+++.+ .. ..+ |..+. ..+..+++.+..
T Consensus 166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lG--a~-~vi--~~~~~~~~~~~~~i~~~t~ 240 (364)
T 1gu7_A 166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELG--AT-QVI--TEDQNNSREFGPTIKEWIK 240 (364)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHT--CS-EEE--EHHHHHCGGGHHHHHHHHH
T ss_pred CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcC--Ce-EEE--ecCccchHHHHHHHHHHhh
Confidence 47 999999999999999988888889999999877665333223333332 21 112 22210 013344555444
Q ss_pred -cCCCeEEEEEccC
Q 020854 129 -EGLDVGVLINNVG 141 (320)
Q Consensus 129 -~~~~id~lI~nAG 141 (320)
+...+|++|.++|
T Consensus 241 ~~~~g~Dvvid~~G 254 (364)
T 1gu7_A 241 QSGGEAKLALNCVG 254 (364)
T ss_dssp HHTCCEEEEEESSC
T ss_pred ccCCCceEEEECCC
Confidence 3336889999987
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0012 Score=60.03 Aligned_cols=83 Identities=22% Similarity=0.334 Sum_probs=59.2
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLN-LVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~-Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|++|+|+|+ |++|...++-....|++ |+.+++++++++... ++ . . .+..+..|.. ..++..+++.+..+.
T Consensus 179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-~---~-~~~~~~~~~~-~~~~~~~~v~~~t~g 250 (363)
T 3m6i_A 179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAK-EI-C---P-EVVTHKVERL-SAEESAKKIVESFGG 250 (363)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH-HH-C---T-TCEEEECCSC-CHHHHHHHHHHHTSS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-c---h-hccccccccc-chHHHHHHHHHHhCC
Confidence 4889999998 99999999888889997 999999998876543 33 2 1 2333333322 224566777777666
Q ss_pred CCeEEEEEccCC
Q 020854 131 LDVGVLINNVGI 142 (320)
Q Consensus 131 ~~id~lI~nAG~ 142 (320)
..+|+++.++|.
T Consensus 251 ~g~Dvvid~~g~ 262 (363)
T 3m6i_A 251 IEPAVALECTGV 262 (363)
T ss_dssp CCCSEEEECSCC
T ss_pred CCCCEEEECCCC
Confidence 568899999883
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00048 Score=61.77 Aligned_cols=75 Identities=17% Similarity=0.148 Sum_probs=49.0
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeE
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG 134 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 134 (320)
+|+|+||+||+|...++.+...|++|+.+++++++++... ++ +... . +|..+. + .+..+.+....+|
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~l-----Ga~~-~--i~~~~~--~--~~~~~~~~~~~~d 218 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VL-----GAKE-V--LAREDV--M--AERIRPLDKQRWA 218 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HT-----TCSE-E--EECC-------------CCSCCEE
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-Hc-----CCcE-E--EecCCc--H--HHHHHHhcCCccc
Confidence 7999999999999999998889999999999987766442 22 2221 1 343332 1 1112222233688
Q ss_pred EEEEccCC
Q 020854 135 VLINNVGI 142 (320)
Q Consensus 135 ~lI~nAG~ 142 (320)
++|+++|.
T Consensus 219 ~vid~~g~ 226 (328)
T 1xa0_A 219 AAVDPVGG 226 (328)
T ss_dssp EEEECSTT
T ss_pred EEEECCcH
Confidence 99999984
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00058 Score=59.08 Aligned_cols=83 Identities=24% Similarity=0.397 Sum_probs=60.2
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCH-------------------HHHHHHHHHHHhhcCCceEEEE
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP-------------------DKLKDVSDSIQAKYAKTQIKSV 109 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~ 109 (320)
++++++|+|.|+ ||+|.++++.|+..|. ++.++|++. .+.+..++.+++.++..++..+
T Consensus 25 ~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~ 103 (251)
T 1zud_1 25 KLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTAL 103 (251)
T ss_dssp HHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence 466899999998 7899999999999997 788887643 6778888888888888777776
Q ss_pred EEeCCCCcHHHHHHHHHHHcCCCeEEEEEccC
Q 020854 110 VVDFSGDLDEGVERIKEAIEGLDVGVLINNVG 141 (320)
Q Consensus 110 ~~D~~~~~~~~~~~~~~~~~~~~id~lI~nAG 141 (320)
..++++ +. +.+.+.+.| +||++..
T Consensus 104 ~~~~~~---~~---~~~~~~~~D--vVi~~~d 127 (251)
T 1zud_1 104 QQRLTG---EA---LKDAVARAD--VVLDCTD 127 (251)
T ss_dssp CSCCCH---HH---HHHHHHHCS--EEEECCS
T ss_pred eccCCH---HH---HHHHHhcCC--EEEECCC
Confidence 554432 22 223333334 8886643
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0023 Score=58.57 Aligned_cols=80 Identities=18% Similarity=0.183 Sum_probs=54.4
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|++|+|+|+ |++|...++.+...|+ +|+.+++++++++.. +++ +.. . .+|..+..++..+++.+..+.
T Consensus 195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~l-----Ga~-~--vi~~~~~~~~~~~~v~~~~~~ 264 (376)
T 1e3i_A 195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-KAL-----GAT-D--CLNPRELDKPVQDVITELTAG 264 (376)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHT-----TCS-E--EECGGGCSSCHHHHHHHHHTS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh-----CCc-E--EEccccccchHHHHHHHHhCC
Confidence 4899999996 9999999988888999 799999998887643 222 221 1 134432111344455554444
Q ss_pred CCeEEEEEccCC
Q 020854 131 LDVGVLINNVGI 142 (320)
Q Consensus 131 ~~id~lI~nAG~ 142 (320)
.+|++|.++|.
T Consensus 265 -g~Dvvid~~G~ 275 (376)
T 1e3i_A 265 -GVDYSLDCAGT 275 (376)
T ss_dssp -CBSEEEESSCC
T ss_pred -CccEEEECCCC
Confidence 67799999884
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0014 Score=60.22 Aligned_cols=81 Identities=16% Similarity=0.282 Sum_probs=56.8
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcC-CeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCC-CcHHHHHHHHHHHc
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG-DLDEGVERIKEAIE 129 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G-~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~ 129 (320)
.|++|+|+| +|++|...++.+...| ++|+.+++++++++... ++ +.. .. +|... +..+..+++.+..+
T Consensus 195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~-~v--i~~~~~~~~~~~~~v~~~~~ 264 (380)
T 1vj0_A 195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EI-----GAD-LT--LNRRETSVEERRKAIMDITH 264 (380)
T ss_dssp BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HT-----TCS-EE--EETTTSCHHHHHHHHHHHTT
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-Hc-----CCc-EE--EeccccCcchHHHHHHHHhC
Confidence 489999999 8999999999888899 59999999988766432 22 222 11 34331 11245566666555
Q ss_pred CCCeEEEEEccCC
Q 020854 130 GLDVGVLINNVGI 142 (320)
Q Consensus 130 ~~~id~lI~nAG~ 142 (320)
...+|++|.++|.
T Consensus 265 g~g~Dvvid~~g~ 277 (380)
T 1vj0_A 265 GRGADFILEATGD 277 (380)
T ss_dssp TSCEEEEEECSSC
T ss_pred CCCCcEEEECCCC
Confidence 5468899999984
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=97.21 E-value=0.0022 Score=57.74 Aligned_cols=76 Identities=16% Similarity=0.292 Sum_probs=55.2
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++|+|+|+ ||+|...++.+...|++|+.+++++++.+.. +++ +... .+|..+. +..+.+.+..+
T Consensus 166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l-----Ga~~---~i~~~~~--~~~~~~~~~~g-- 231 (340)
T 3s2e_A 166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLA-RRL-----GAEV---AVNARDT--DPAAWLQKEIG-- 231 (340)
T ss_dssp TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHT-----TCSE---EEETTTS--CHHHHHHHHHS--
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHc-----CCCE---EEeCCCc--CHHHHHHHhCC--
Confidence 5899999997 8999999998888999999999999887643 222 2221 2355543 45556666444
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
.+|++|.++|
T Consensus 232 ~~d~vid~~g 241 (340)
T 3s2e_A 232 GAHGVLVTAV 241 (340)
T ss_dssp SEEEEEESSC
T ss_pred CCCEEEEeCC
Confidence 5789999987
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.21 E-value=0.0011 Score=51.90 Aligned_cols=44 Identities=18% Similarity=0.325 Sum_probs=39.8
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI 97 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l 97 (320)
|++++|.|+ |++|+++++.|.+.|++|++++|+.++.++..+++
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~ 64 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY 64 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh
Confidence 899999996 99999999999999999999999999888776655
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0024 Score=58.00 Aligned_cols=78 Identities=24% Similarity=0.337 Sum_probs=54.4
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKT-GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~-G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|++|+|+|| |++|...++-+... |++|+.+++++++++... ++ +... .+|..++ ..+.+.+..+.
T Consensus 186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~---vi~~~~~---~~~~v~~~~~g 252 (359)
T 1h2b_A 186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RL-----GADH---VVDARRD---PVKQVMELTRG 252 (359)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HT-----TCSE---EEETTSC---HHHHHHHHTTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-Hh-----CCCE---EEeccch---HHHHHHHHhCC
Confidence 4899999999 89999999888788 999999999988766442 22 2221 1344432 33444443333
Q ss_pred CCeEEEEEccCC
Q 020854 131 LDVGVLINNVGI 142 (320)
Q Consensus 131 ~~id~lI~nAG~ 142 (320)
..+|++|.++|.
T Consensus 253 ~g~Dvvid~~G~ 264 (359)
T 1h2b_A 253 RGVNVAMDFVGS 264 (359)
T ss_dssp CCEEEEEESSCC
T ss_pred CCCcEEEECCCC
Confidence 368899999983
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=97.19 E-value=0.006 Score=54.71 Aligned_cols=118 Identities=16% Similarity=0.194 Sum_probs=75.5
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhhcCC--ceEEEEEEeCCCCcHHHHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAK--TQIKSVVVDFSGDLDEGVERIKEA 127 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~ 127 (320)
..+.+.|+|+ |.+|.+++..|+..|. +|+++++++++++..+.++....+- ..+....-|. +.
T Consensus 4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~------------~a 70 (326)
T 3pqe_A 4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTY------------ED 70 (326)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECG------------GG
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcH------------HH
Confidence 3567999996 9999999999999996 8999999999988877777653221 1222222111 12
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcc
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGA 195 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~ 195 (320)
+.. -|++|..||.... + ..+. .+.++.|..-...+.+.+..+ .+.+.++++|--.
T Consensus 71 ~~~--aDvVvi~ag~p~k---p--G~~R---~dL~~~N~~Iv~~i~~~I~~~---~p~a~vlvvtNPv 125 (326)
T 3pqe_A 71 CKD--ADIVCICAGANQK---P--GETR---LELVEKNLKIFKGIVSEVMAS---GFDGIFLVATNPV 125 (326)
T ss_dssp GTT--CSEEEECCSCCCC---T--TCCH---HHHHHHHHHHHHHHHHHHHHT---TCCSEEEECSSSH
T ss_pred hCC--CCEEEEecccCCC---C--CccH---HHHHHHHHHHHHHHHHHHHHh---cCCeEEEEcCChH
Confidence 333 4499999996432 1 2333 334566765555555554332 3567888877543
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0022 Score=59.33 Aligned_cols=79 Identities=18% Similarity=0.278 Sum_probs=58.1
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|++|+|+|+ |++|...++-+...|+ +|+.+++++++++.. +++ +... .+|..++ +..+++.+..+.
T Consensus 213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~l-----Ga~~---vi~~~~~--~~~~~i~~~t~g 280 (404)
T 3ip1_A 213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KEL-----GADH---VIDPTKE--NFVEAVLDYTNG 280 (404)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHH-----TCSE---EECTTTS--CHHHHHHHHTTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc-----CCCE---EEcCCCC--CHHHHHHHHhCC
Confidence 5899999998 9999999988888999 899999998876643 333 2221 2344443 566677776666
Q ss_pred CCeEEEEEccCC
Q 020854 131 LDVGVLINNVGI 142 (320)
Q Consensus 131 ~~id~lI~nAG~ 142 (320)
..+|++|.++|.
T Consensus 281 ~g~D~vid~~g~ 292 (404)
T 3ip1_A 281 LGAKLFLEATGV 292 (404)
T ss_dssp CCCSEEEECSSC
T ss_pred CCCCEEEECCCC
Confidence 567899999884
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0024 Score=58.31 Aligned_cols=79 Identities=13% Similarity=0.183 Sum_probs=55.8
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
..|++|+|+||+|++|...++-+...|++|+.+. ++++++ ..+++ +.. ..+|..+. +..+.+.+..++
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~-~~~~l-----Ga~---~vi~~~~~--~~~~~v~~~t~g 230 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD-LAKSR-----GAE---EVFDYRAP--NLAQTIRTYTKN 230 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH-HHHHT-----TCS---EEEETTST--THHHHHHHHTTT
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH-HHHHc-----CCc---EEEECCCc--hHHHHHHHHccC
Confidence 4689999999999999999999889999998886 566654 33332 221 12355444 555666665554
Q ss_pred CCeEEEEEccCC
Q 020854 131 LDVGVLINNVGI 142 (320)
Q Consensus 131 ~~id~lI~nAG~ 142 (320)
.+|+++.++|.
T Consensus 231 -~~d~v~d~~g~ 241 (371)
T 3gqv_A 231 -NLRYALDCITN 241 (371)
T ss_dssp -CCCEEEESSCS
T ss_pred -CccEEEECCCc
Confidence 37899999884
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0044 Score=55.99 Aligned_cols=117 Identities=21% Similarity=0.233 Sum_probs=72.1
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKY-AKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
.++.|.|+|++|++|..+|..++.+|. +|+++|.++++++..+.++.... +..++. .+++ ..+.+
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~-----~t~d-------~~~al 74 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLT-----FTSD-------IKEAL 74 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCE-----EESC-------HHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceE-----EcCC-------HHHHh
Confidence 367899999999999999999999994 89999999998887777775431 111111 1111 22223
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcE-EEEEcC
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGA-IVNIGS 193 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~-Iv~vsS 193 (320)
. +-|++|..||.... + ..+. .+.++.|.--...+.+.+..+ .+++. |+++|-
T Consensus 75 ~--dADvVvitaG~p~k---p--G~~R---~dLl~~N~~I~~~i~~~i~~~---~p~a~~vlvvsN 127 (343)
T 3fi9_A 75 T--DAKYIVSSGGAPRK---E--GMTR---EDLLKGNAEIAAQLGKDIKSY---CPDCKHVIIIFN 127 (343)
T ss_dssp T--TEEEEEECCC------------CH---HHHHHHHHHHHHHHHHHHHHH---CTTCCEEEECSS
T ss_pred C--CCCEEEEccCCCCC---C--CCCH---HHHHHHHHHHHHHHHHHHHHh---ccCcEEEEEecC
Confidence 3 46699999996432 1 2232 344566766555555554332 34564 667754
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00061 Score=54.12 Aligned_cols=76 Identities=18% Similarity=0.240 Sum_probs=51.2
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHH-Hc
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA-IE 129 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~ 129 (320)
..++.++|.|+ |.+|..+++.|.+.|++|++++|++++.+...+ ......+..|..+. +. +.+. +.
T Consensus 17 ~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~-------~~g~~~~~~d~~~~--~~---l~~~~~~ 83 (155)
T 2g1u_A 17 QKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS-------EFSGFTVVGDAAEF--ET---LKECGME 83 (155)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT-------TCCSEEEESCTTSH--HH---HHTTTGG
T ss_pred cCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh-------cCCCcEEEecCCCH--HH---HHHcCcc
Confidence 45788999996 999999999999999999999999887543210 11233455565542 22 2221 33
Q ss_pred CCCeEEEEEccC
Q 020854 130 GLDVGVLINNVG 141 (320)
Q Consensus 130 ~~~id~lI~nAG 141 (320)
+ .|++|.+.+
T Consensus 84 ~--ad~Vi~~~~ 93 (155)
T 2g1u_A 84 K--ADMVFAFTN 93 (155)
T ss_dssp G--CSEEEECSS
T ss_pred c--CCEEEEEeC
Confidence 3 458888765
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00097 Score=61.20 Aligned_cols=80 Identities=18% Similarity=0.213 Sum_probs=57.4
Q ss_pred CCCEEEEEC-CCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTG-PTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITG-as~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|.+|+|.| |+|++|...++-+...|++|+.+++++++++... ++ +... .+|..+. +..+++.+..+.
T Consensus 170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~---~~~~~~~--~~~~~v~~~t~~ 238 (379)
T 3iup_A 170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK-AQ-----GAVH---VCNAASP--TFMQDLTEALVS 238 (379)
T ss_dssp TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH-HT-----TCSC---EEETTST--THHHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hC-----CCcE---EEeCCCh--HHHHHHHHHhcC
Confidence 478899997 9999999999988889999999999988866443 22 2211 1344443 455666665554
Q ss_pred CCeEEEEEccCC
Q 020854 131 LDVGVLINNVGI 142 (320)
Q Consensus 131 ~~id~lI~nAG~ 142 (320)
..+|+++.++|.
T Consensus 239 ~g~d~v~d~~g~ 250 (379)
T 3iup_A 239 TGATIAFDATGG 250 (379)
T ss_dssp HCCCEEEESCEE
T ss_pred CCceEEEECCCc
Confidence 357799999984
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0038 Score=56.96 Aligned_cols=78 Identities=19% Similarity=0.240 Sum_probs=55.2
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|++|+|+|+ |++|...++.+...|+ +|+.+++++++++.. +++ +... .+|..++ +..+++.+..+.
T Consensus 190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a-~~l-----Ga~~---vi~~~~~--~~~~~~~~~~~g 257 (371)
T 1f8f_A 190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQL-----GATH---VINSKTQ--DPVAAIKEITDG 257 (371)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHH-----TCSE---EEETTTS--CHHHHHHHHTTS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHc-----CCCE---EecCCcc--CHHHHHHHhcCC
Confidence 4899999995 9999999988888899 699999998876643 333 2221 2344443 445556555555
Q ss_pred CCeEEEEEccCC
Q 020854 131 LDVGVLINNVGI 142 (320)
Q Consensus 131 ~~id~lI~nAG~ 142 (320)
.+|++|.++|.
T Consensus 258 -g~D~vid~~g~ 268 (371)
T 1f8f_A 258 -GVNFALESTGS 268 (371)
T ss_dssp -CEEEEEECSCC
T ss_pred -CCcEEEECCCC
Confidence 68899999883
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0026 Score=58.63 Aligned_cols=78 Identities=21% Similarity=0.347 Sum_probs=55.9
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHH-HHHHHHHHc
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEG-VERIKEAIE 129 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~ 129 (320)
.|++|+|+|+ |++|...++-+...|+ +|+.+++++++++... +. +. . .+|..+. +. .+++.+..+
T Consensus 185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~----~l--Ga--~--~i~~~~~--~~~~~~~~~~~~ 251 (398)
T 2dph_A 185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLS----DA--GF--E--TIDLRNS--APLRDQIDQILG 251 (398)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH----TT--TC--E--EEETTSS--SCHHHHHHHHHS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH----Hc--CC--c--EEcCCCc--chHHHHHHHHhC
Confidence 4899999996 9999999888878899 8999999998765432 22 32 2 2455443 32 455555555
Q ss_pred CCCeEEEEEccCC
Q 020854 130 GLDVGVLINNVGI 142 (320)
Q Consensus 130 ~~~id~lI~nAG~ 142 (320)
...+|++|.++|.
T Consensus 252 g~g~Dvvid~~g~ 264 (398)
T 2dph_A 252 KPEVDCGVDAVGF 264 (398)
T ss_dssp SSCEEEEEECSCT
T ss_pred CCCCCEEEECCCC
Confidence 5468899999985
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0094 Score=53.17 Aligned_cols=118 Identities=18% Similarity=0.248 Sum_probs=71.4
Q ss_pred EEEEECCCCcHHHHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G--~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
.+.|+||+|.+|..++..|+..| .+|+++|+++ .+....++.......++.... -+ ++..+.+...|
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~--~t-------~d~~~a~~~aD 70 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYL--GP-------EQLPDCLKGCD 70 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEE--SG-------GGHHHHHTTCS
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEec--CC-------CCHHHHhCCCC
Confidence 58999999999999999999888 6899999987 333444553321111122110 01 11233344445
Q ss_pred eEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccc
Q 020854 133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAA 196 (320)
Q Consensus 133 id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~ 196 (320)
++|+.+|.... + ..+.. +.+..|.-....+.+.+..+ .+.+.|+++|--..
T Consensus 71 --vVvi~ag~~~~---~--g~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~viv~sNPv~ 121 (314)
T 1mld_A 71 --VVVIPAGVPRK---P--GMTRD---DLFNTNATIVATLTAACAQH---CPDAMICIISNPVN 121 (314)
T ss_dssp --EEEECCSCCCC---T--TCCGG---GGHHHHHHHHHHHHHHHHHH---CTTSEEEECSSCHH
T ss_pred --EEEECCCcCCC---C--CCcHH---HHHHHHHHHHHHHHHHHHhh---CCCeEEEEECCCcc
Confidence 99999997542 1 12221 23567777666666665443 35678888765443
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0046 Score=55.46 Aligned_cols=119 Identities=13% Similarity=0.191 Sum_probs=67.3
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhhcCC-ceEEEEEEeCCCCcHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAK-TQIKSVVVDFSGDLDEGVERIK 125 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~D~~~~~~~~~~~~~ 125 (320)
++..++.+.|+|+ |++|.+++..|+..|. +|+++|+++++++..+.++....+- ..+.... | + .
T Consensus 5 ~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~-~---~--------~ 71 (326)
T 3vku_A 5 TDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYS-A---E--------Y 71 (326)
T ss_dssp --CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C---C--------G
T ss_pred ccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEE-C---c--------H
Confidence 3455778999996 9999999999999986 8999999999888777777653221 1122111 1 1 1
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhc-CCCcEEEEEcCc
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK-RKKGAIVNIGSG 194 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~-~~~g~Iv~vsS~ 194 (320)
+.+.. -|++|..||.... + ..+. .+.++.|.--...+.+. +.+ .+++.++++|--
T Consensus 72 ~a~~~--aDiVvi~ag~~~k---p--G~tR---~dL~~~N~~I~~~i~~~----i~~~~p~a~ilvvtNP 127 (326)
T 3vku_A 72 SDAKD--ADLVVITAGAPQK---P--GETR---LDLVNKNLKILKSIVDP----IVDSGFNGIFLVAANP 127 (326)
T ss_dssp GGGTT--CSEEEECCCCC------------------------CHHHHHHH----HHTTTCCSEEEECSSS
T ss_pred HHhcC--CCEEEECCCCCCC---C--CchH---HHHHHHHHHHHHHHHHH----HHhcCCceEEEEccCc
Confidence 12333 4599999996432 1 1222 33455565444444444 433 346777777653
|
| >3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0011 Score=60.71 Aligned_cols=80 Identities=16% Similarity=0.163 Sum_probs=56.3
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|++|+|+|+ |++|...++-+...|+ +|+.+++++++++.. +++ +... .+|..+...+..+.+.+..++
T Consensus 193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a-~~l-----Ga~~---vi~~~~~~~~~~~~i~~~~~g 262 (378)
T 3uko_A 193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA-KKF-----GVNE---FVNPKDHDKPIQEVIVDLTDG 262 (378)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH-HTT-----TCCE---EECGGGCSSCHHHHHHHHTTS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc-----CCcE---EEccccCchhHHHHHHHhcCC
Confidence 4889999998 9999999988888999 899999999887633 222 2211 234432112455666665555
Q ss_pred CCeEEEEEccCC
Q 020854 131 LDVGVLINNVGI 142 (320)
Q Consensus 131 ~~id~lI~nAG~ 142 (320)
.+|++|.++|.
T Consensus 263 -g~D~vid~~g~ 273 (378)
T 3uko_A 263 -GVDYSFECIGN 273 (378)
T ss_dssp -CBSEEEECSCC
T ss_pred -CCCEEEECCCC
Confidence 68899999883
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=97.04 E-value=0.012 Score=52.90 Aligned_cols=120 Identities=22% Similarity=0.176 Sum_probs=77.0
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhhc--CCceEEEEEEeCCCCcHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKY--AKTQIKSVVVDFSGDLDEGVERIKE 126 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~ 126 (320)
...+.+.|+|+ |++|.+++..|+.+|. +|++.|++.++++..+.++.... +... .... +++ . +
T Consensus 17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~-~i~~---~~d-------~-~ 83 (331)
T 4aj2_A 17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTP-KIVS---SKD-------Y-S 83 (331)
T ss_dssp CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCC-EEEE---CSS-------G-G
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCC-eEEE---cCC-------H-H
Confidence 44678999997 9999999999999997 89999999998888887776531 1111 1111 111 0 1
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccc
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAA 196 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~ 196 (320)
.+. +-|++|..||.... + ..+. .+.++.|.--...+.+.+..+ .+.+.++++|--..
T Consensus 84 ~~~--~aDiVvi~aG~~~k---p--G~tR---~dL~~~N~~I~~~i~~~i~~~---~p~a~vlvvtNPvd 140 (331)
T 4aj2_A 84 VTA--NSKLVIITAGARQQ---E--GESR---LNLVQRNVNIFKFIIPNVVKY---SPQCKLLIVSNPVD 140 (331)
T ss_dssp GGT--TEEEEEECCSCCCC---T--TCCG---GGGHHHHHHHHHHHHHHHHHH---CTTCEEEECSSSHH
T ss_pred HhC--CCCEEEEccCCCCC---C--CccH---HHHHHHHHHHHHHHHHHHHHH---CCCeEEEEecChHH
Confidence 122 56799999997542 2 2233 234566665555555554432 45678888876433
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0027 Score=58.01 Aligned_cols=103 Identities=22% Similarity=0.264 Sum_probs=68.2
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHH---H
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKE---A 127 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~---~ 127 (320)
.|++|+|+|+ |++|...++-+...|+ +|+.+++++++.+. ++++ +.. ...|..+. +..+.+.+ .
T Consensus 182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~-a~~l-----Ga~---~vi~~~~~--~~~~~i~~~~~~ 249 (370)
T 4ej6_A 182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRL-AEEV-----GAT---ATVDPSAG--DVVEAIAGPVGL 249 (370)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHH-HHHH-----TCS---EEECTTSS--CHHHHHHSTTSS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-HHHc-----CCC---EEECCCCc--CHHHHHHhhhhc
Confidence 4899999998 9999999988888999 89999999887653 3333 222 12344443 44455544 3
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccc
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAA 196 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~ 196 (320)
.++ .+|+++.++|.. + ..+.++..+ +++|+++.++...+
T Consensus 250 ~~g-g~Dvvid~~G~~------------~---------------~~~~~~~~l--~~~G~vv~~G~~~~ 288 (370)
T 4ej6_A 250 VPG-GVDVVIECAGVA------------E---------------TVKQSTRLA--KAGGTVVILGVLPQ 288 (370)
T ss_dssp STT-CEEEEEECSCCH------------H---------------HHHHHHHHE--EEEEEEEECSCCCT
T ss_pred cCC-CCCEEEECCCCH------------H---------------HHHHHHHHh--ccCCEEEEEeccCC
Confidence 333 688999998731 0 123444444 34699999876544
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0022 Score=58.44 Aligned_cols=77 Identities=16% Similarity=0.170 Sum_probs=53.0
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHH-cCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAK-TGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~-~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|++|+|+||+|++|...++-+.. .|++|+.+++++++.+.+. ++ +... .+|..+ +..+++.+. ..
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~-~l-----Gad~---vi~~~~---~~~~~v~~~-~~ 237 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK-SL-----GAHH---VIDHSK---PLAAEVAAL-GL 237 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH-HT-----TCSE---EECTTS---CHHHHHHTT-CS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH-Hc-----CCCE---EEeCCC---CHHHHHHHh-cC
Confidence 589999999999999887766655 5899999999988766542 22 2221 124333 334444443 44
Q ss_pred CCeEEEEEccC
Q 020854 131 LDVGVLINNVG 141 (320)
Q Consensus 131 ~~id~lI~nAG 141 (320)
..+|+++.++|
T Consensus 238 ~g~Dvvid~~g 248 (363)
T 4dvj_A 238 GAPAFVFSTTH 248 (363)
T ss_dssp CCEEEEEECSC
T ss_pred CCceEEEECCC
Confidence 46889999987
|
| >1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1 | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0013 Score=58.43 Aligned_cols=37 Identities=24% Similarity=0.296 Sum_probs=32.1
Q ss_pred cCCCE-EEEECCCC-----------------c-HHHHHHHHHHHcCCeEEEEeCCH
Q 020854 51 KYGSW-ALVTGPTD-----------------G-IGKSFAFQLAKTGLNLVLVGRNP 87 (320)
Q Consensus 51 ~~gk~-vlITGas~-----------------G-IG~ala~~l~~~G~~Vil~~r~~ 87 (320)
+.||. ||||+|.. | .|.++|+.++++|+.|+++.+..
T Consensus 34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR 89 (313)
T ss_dssp HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence 45877 99998765 6 99999999999999999998853
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0029 Score=57.24 Aligned_cols=79 Identities=18% Similarity=0.200 Sum_probs=57.4
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|++|+|+|+ |++|...++-+...|+ +|+.+++++++++.. +++ +.. . .+|..+. +..+++.+..+.
T Consensus 166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~l-----Ga~-~--vi~~~~~--~~~~~v~~~t~g 233 (352)
T 3fpc_A 166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA-LEY-----GAT-D--IINYKNG--DIVEQILKATDG 233 (352)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH-HHH-----TCC-E--EECGGGS--CHHHHHHHHTTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHh-----CCc-e--EEcCCCc--CHHHHHHHHcCC
Confidence 4889999985 9999999988888999 899999998876533 333 221 1 2343333 556777776666
Q ss_pred CCeEEEEEccCC
Q 020854 131 LDVGVLINNVGI 142 (320)
Q Consensus 131 ~~id~lI~nAG~ 142 (320)
..+|+++.++|.
T Consensus 234 ~g~D~v~d~~g~ 245 (352)
T 3fpc_A 234 KGVDKVVIAGGD 245 (352)
T ss_dssp CCEEEEEECSSC
T ss_pred CCCCEEEECCCC
Confidence 678999998884
|
| >3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.00075 Score=59.33 Aligned_cols=46 Identities=20% Similarity=0.325 Sum_probs=40.4
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSD 95 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~ 95 (320)
+++.||.++|+|+ ||.|++++..|.+.|+ +|++++|+.++.+++++
T Consensus 118 ~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~ 164 (282)
T 3fbt_A 118 VEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYG 164 (282)
T ss_dssp CCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCT
T ss_pred CCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence 4567999999997 6999999999999998 89999999988776654
|
| >3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0016 Score=59.16 Aligned_cols=82 Identities=11% Similarity=0.345 Sum_probs=63.0
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCH-------------------HHHHHHHHHHHhhcCCceEEEE
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP-------------------DKLKDVSDSIQAKYAKTQIKSV 109 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~ 109 (320)
++++++|+|.|+ ||+|.++++.|+..|. ++.++|++. .+.+..++.+.+.+|...+..+
T Consensus 115 ~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~ 193 (353)
T 3h5n_A 115 KLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEI 193 (353)
T ss_dssp HHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEe
Confidence 356889999987 8999999999999997 899998763 3677788888888888888888
Q ss_pred EEeCCCCcHHHHHHHHHHHcCCCeEEEEEcc
Q 020854 110 VVDFSGDLDEGVERIKEAIEGLDVGVLINNV 140 (320)
Q Consensus 110 ~~D~~~~~~~~~~~~~~~~~~~~id~lI~nA 140 (320)
..++.+. . .+.+ +.. .|+||.+.
T Consensus 194 ~~~i~~~--~---~~~~-~~~--~DlVvd~~ 216 (353)
T 3h5n_A 194 ALNINDY--T---DLHK-VPE--ADIWVVSA 216 (353)
T ss_dssp ECCCCSG--G---GGGG-SCC--CSEEEECC
T ss_pred ecccCch--h---hhhH-hcc--CCEEEEec
Confidence 8777654 1 1222 444 44888765
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0025 Score=58.16 Aligned_cols=80 Identities=23% Similarity=0.260 Sum_probs=54.2
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|++|+|+|+ |++|...++.+...|+ +|+.+++++++++.. +++ +.. . .+|..+..++..+.+.+..+.
T Consensus 191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~l-----Ga~-~--vi~~~~~~~~~~~~~~~~~~~ 260 (374)
T 2jhf_A 191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA-KEV-----GAT-E--CVNPQDYKKPIQEVLTEMSNG 260 (374)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHT-----TCS-E--EECGGGCSSCHHHHHHHHTTS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh-----CCc-e--EecccccchhHHHHHHHHhCC
Confidence 4899999995 9999999998888999 799999998887644 222 221 1 134432111334445444444
Q ss_pred CCeEEEEEccCC
Q 020854 131 LDVGVLINNVGI 142 (320)
Q Consensus 131 ~~id~lI~nAG~ 142 (320)
.+|++|.++|.
T Consensus 261 -g~D~vid~~g~ 271 (374)
T 2jhf_A 261 -GVDFSFEVIGR 271 (374)
T ss_dssp -CBSEEEECSCC
T ss_pred -CCcEEEECCCC
Confidence 67799999884
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0051 Score=55.74 Aligned_cols=80 Identities=19% Similarity=0.244 Sum_probs=55.0
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCC-CcHHHHHHHHHHHc
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG-DLDEGVERIKEAIE 129 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~ 129 (320)
.|++|+|+|+ |++|...++.+...|+ +|+.+++++++++... ++ +.. .. +|..+ +..+..+++.+..+
T Consensus 171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~-~v--i~~~~~~~~~~~~~i~~~~~ 240 (356)
T 1pl8_A 171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI-----GAD-LV--LQISKESPQEIARKVEGQLG 240 (356)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT-----TCS-EE--EECSSCCHHHHHHHHHHHHT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-----CCC-EE--EcCcccccchHHHHHHHHhC
Confidence 4889999996 8999999988888999 8999999988765432 22 222 22 34331 11355566666554
Q ss_pred CCCeEEEEEccCC
Q 020854 130 GLDVGVLINNVGI 142 (320)
Q Consensus 130 ~~~id~lI~nAG~ 142 (320)
..+|++|.++|.
T Consensus 241 -~g~D~vid~~g~ 252 (356)
T 1pl8_A 241 -CKPEVTIECTGA 252 (356)
T ss_dssp -SCCSEEEECSCC
T ss_pred -CCCCEEEECCCC
Confidence 357799999873
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0015 Score=53.20 Aligned_cols=77 Identities=13% Similarity=0.059 Sum_probs=52.4
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKT-GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~-G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
...++.++|.| .|.+|..+++.|.+. |++|+++++++++.+... +. + +..+..|.++. +. .+..
T Consensus 36 ~~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~----~~--g--~~~~~gd~~~~--~~----l~~~ 100 (183)
T 3c85_A 36 NPGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHR----SE--G--RNVISGDATDP--DF----WERI 100 (183)
T ss_dssp CCTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH----HT--T--CCEEECCTTCH--HH----HHTB
T ss_pred CCCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH----HC--C--CCEEEcCCCCH--HH----HHhc
Confidence 35577788888 599999999999999 999999999998765532 22 2 33455676653 22 2222
Q ss_pred -cCCCeEEEEEccC
Q 020854 129 -EGLDVGVLINNVG 141 (320)
Q Consensus 129 -~~~~id~lI~nAG 141 (320)
+-.+.|++|.+.+
T Consensus 101 ~~~~~ad~vi~~~~ 114 (183)
T 3c85_A 101 LDTGHVKLVLLAMP 114 (183)
T ss_dssp CSCCCCCEEEECCS
T ss_pred cCCCCCCEEEEeCC
Confidence 2224568887665
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.015 Score=51.77 Aligned_cols=117 Identities=20% Similarity=0.202 Sum_probs=73.0
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCC--HHHHHHHHHHHHhhc----CCceEEEEEEeCCCCcHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRN--PDKLKDVSDSIQAKY----AKTQIKSVVVDFSGDLDEGVER 123 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~--~~~~~~~~~~l~~~~----~~~~~~~~~~D~~~~~~~~~~~ 123 (320)
.+.+.+.|+|+ |.+|.++|..++..|. +|++.+++ +++.+....++.... ...++... ++
T Consensus 6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t-----~d------- 72 (315)
T 3tl2_A 6 IKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT-----SD------- 72 (315)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE-----SC-------
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc-----CC-------
Confidence 34678999997 9999999999999999 99999999 666665555554321 12222221 11
Q ss_pred HHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCc
Q 020854 124 IKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSG 194 (320)
Q Consensus 124 ~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~ 194 (320)
.+.+. +-|++|..+|.... + ..+. .+.++.|.--.-.+.+.+..+ .+.+.++++|--
T Consensus 73 -~~a~~--~aDvVIiaag~p~k---p--g~~R---~dl~~~N~~i~~~i~~~i~~~---~p~a~vlvvsNP 129 (315)
T 3tl2_A 73 -YADTA--DSDVVVITAGIARK---P--GMSR---DDLVATNSKIMKSITRDIAKH---SPNAIIVVLTNP 129 (315)
T ss_dssp -GGGGT--TCSEEEECCSCCCC---T--TCCH---HHHHHHHHHHHHHHHHHHHHH---CTTCEEEECCSS
T ss_pred -HHHhC--CCCEEEEeCCCCCC---C--CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCeEEEECCCh
Confidence 01233 34599999997542 2 2343 344566665555555554432 456788888753
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0061 Score=54.84 Aligned_cols=118 Identities=23% Similarity=0.221 Sum_probs=72.8
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCC--e-----EEEEeCCH--HHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHH
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGL--N-----LVLVGRNP--DKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERI 124 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~--~-----Vil~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~ 124 (320)
..|.||||+|.+|..++..|+..|. + ++++|+++ ++++..+.++..... .... .....+. .
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~-~~~~--~~~~~~~-------~ 73 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCAL-PLLK--DVIATDK-------E 73 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCC-TTEE--EEEEESC-------H
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhh-cccC--CEEEcCC-------c
Confidence 4699999999999999999998875 5 99999974 466666667754211 1121 2222222 2
Q ss_pred HHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCc-EEEEEcCc
Q 020854 125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKG-AIVNIGSG 194 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g-~Iv~vsS~ 194 (320)
.+.+.+ -|++|+.||.... + ..+. .+.++.|......+.+.+..+ ..++ .|+++|--
T Consensus 74 ~~~~~d--aDvVvitAg~prk---p--G~tR---~dll~~N~~i~~~i~~~i~~~---~~~~~~vivvsNP 131 (333)
T 5mdh_A 74 EIAFKD--LDVAILVGSMPRR---D--GMER---KDLLKANVKIFKCQGAALDKY---AKKSVKVIVVGNP 131 (333)
T ss_dssp HHHTTT--CSEEEECCSCCCC---T--TCCT---TTTHHHHHHHHHHHHHHHHHH---SCTTCEEEECSSS
T ss_pred HHHhCC--CCEEEEeCCCCCC---C--CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCCeEEEEcCCc
Confidence 233444 4499999986432 1 1222 334567777666666655432 2345 57777753
|
| >1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0056 Score=56.36 Aligned_cols=80 Identities=23% Similarity=0.280 Sum_probs=56.6
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|++|+|+|+ |++|...++-+...|+ +|+.+++++++++.. +++ +.. .+|..+. +...+++.+..+.
T Consensus 185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a-~~l-----Ga~----~i~~~~~-~~~~~~v~~~t~g 252 (398)
T 1kol_A 185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA-KAQ-----GFE----IADLSLD-TPLHEQIAALLGE 252 (398)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHT-----TCE----EEETTSS-SCHHHHHHHHHSS
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH-HHc-----CCc----EEccCCc-chHHHHHHHHhCC
Confidence 4899999995 9999999888878899 689999998886644 222 332 2454432 1245566665555
Q ss_pred CCeEEEEEccCCC
Q 020854 131 LDVGVLINNVGIS 143 (320)
Q Consensus 131 ~~id~lI~nAG~~ 143 (320)
..+|++|.++|..
T Consensus 253 ~g~Dvvid~~G~~ 265 (398)
T 1kol_A 253 PEVDCAVDAVGFE 265 (398)
T ss_dssp SCEEEEEECCCTT
T ss_pred CCCCEEEECCCCc
Confidence 5688999999853
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=96.85 E-value=0.002 Score=58.52 Aligned_cols=76 Identities=17% Similarity=0.231 Sum_probs=51.5
Q ss_pred cCCCEEEEECCCCcHHHHH-HHHH-HHcCCe-EEEEeCCHH---HHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSF-AFQL-AKTGLN-LVLVGRNPD---KLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERI 124 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~al-a~~l-~~~G~~-Vil~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~ 124 (320)
+.+++|+|+|| |++|... ++-+ ...|++ |+.++++++ +.+.. +++ +. ..+ |..++ +..+ +
T Consensus 171 ~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~-~~l-----Ga--~~v--~~~~~--~~~~-i 236 (357)
T 2b5w_A 171 WDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII-EEL-----DA--TYV--DSRQT--PVED-V 236 (357)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH-HHT-----TC--EEE--ETTTS--CGGG-H
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH-HHc-----CC--ccc--CCCcc--CHHH-H
Confidence 44699999999 9999999 7766 678997 999999887 65543 222 22 222 54443 2223 3
Q ss_pred HHHHcCCCeEEEEEccCC
Q 020854 125 KEAIEGLDVGVLINNVGI 142 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~ 142 (320)
.+. ++ .+|++|.++|.
T Consensus 237 ~~~-~g-g~Dvvid~~g~ 252 (357)
T 2b5w_A 237 PDV-YE-QMDFIYEATGF 252 (357)
T ss_dssp HHH-SC-CEEEEEECSCC
T ss_pred HHh-CC-CCCEEEECCCC
Confidence 333 44 68899999883
|
| >3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0052 Score=55.25 Aligned_cols=89 Identities=16% Similarity=0.228 Sum_probs=64.8
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCH-------------------HHHHHHHHHHHhhcCCceEEEE
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP-------------------DKLKDVSDSIQAKYAKTQIKSV 109 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~ 109 (320)
++++++|+|.|+ ||+|.++++.|+..|. +++++|++. .|.+..++.+++.+|...+..+
T Consensus 31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~ 109 (340)
T 3rui_A 31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV 109 (340)
T ss_dssp HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEE
Confidence 467999999987 8999999999999997 799988753 5677888889999888888887
Q ss_pred EEeCCC---Cc------HHHHHHHHHHHcCCCeEEEEEccC
Q 020854 110 VVDFSG---DL------DEGVERIKEAIEGLDVGVLINNVG 141 (320)
Q Consensus 110 ~~D~~~---~~------~~~~~~~~~~~~~~~id~lI~nAG 141 (320)
..++.- .+ ....+.+.+.+.+.| +||++..
T Consensus 110 ~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~D--lVvd~tD 148 (340)
T 3rui_A 110 KLSIPMIGHKLVNEEAQHKDFDRLRALIKEHD--IIFLLVD 148 (340)
T ss_dssp CCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCS--EEEECCS
T ss_pred eccccccCcccchhhhhcCCHHHHHhhhccCC--EEEecCC
Confidence 765521 00 112234445555555 7887654
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0035 Score=57.24 Aligned_cols=80 Identities=23% Similarity=0.230 Sum_probs=54.1
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|++|+|+|+ |++|...++.+...|+ +|+.+++++++++... ++ +.. .. +|..+..++..+++.+..++
T Consensus 191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~-~v--i~~~~~~~~~~~~i~~~t~g 260 (373)
T 1p0f_A 191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-EL-----GAT-EC--LNPKDYDKPIYEVICEKTNG 260 (373)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HT-----TCS-EE--ECGGGCSSCHHHHHHHHTTS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-Hc-----CCc-EE--EecccccchHHHHHHHHhCC
Confidence 4899999995 9999999988888899 7999999988876432 22 222 11 34332111344555554444
Q ss_pred CCeEEEEEccCC
Q 020854 131 LDVGVLINNVGI 142 (320)
Q Consensus 131 ~~id~lI~nAG~ 142 (320)
.+|++|.++|.
T Consensus 261 -g~Dvvid~~g~ 271 (373)
T 1p0f_A 261 -GVDYAVECAGR 271 (373)
T ss_dssp -CBSEEEECSCC
T ss_pred -CCCEEEECCCC
Confidence 67899999883
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.78 E-value=0.003 Score=53.03 Aligned_cols=73 Identities=11% Similarity=0.116 Sum_probs=51.6
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeE
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG 134 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 134 (320)
.++|.|+ |.+|..+++.|.+.|++|+++++++++.++..+.. ....+..|.++. +..+ ..+-.+.|
T Consensus 2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~-------~~~~i~gd~~~~--~~l~----~a~i~~ad 67 (218)
T 3l4b_C 2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL-------KATIIHGDGSHK--EILR----DAEVSKND 67 (218)
T ss_dssp CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS-------SSEEEESCTTSH--HHHH----HHTCCTTC
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc-------CCeEEEcCCCCH--HHHH----hcCcccCC
Confidence 4889996 99999999999999999999999998876554321 245677888764 2222 22222344
Q ss_pred EEEEccC
Q 020854 135 VLINNVG 141 (320)
Q Consensus 135 ~lI~nAG 141 (320)
++|...+
T Consensus 68 ~vi~~~~ 74 (218)
T 3l4b_C 68 VVVILTP 74 (218)
T ss_dssp EEEECCS
T ss_pred EEEEecC
Confidence 8886654
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0019 Score=56.25 Aligned_cols=43 Identities=28% Similarity=0.413 Sum_probs=39.6
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI 97 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l 97 (320)
||.++|.|+ ||.|++++..|++.|.+|.+++|+.++.++++ ++
T Consensus 118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~ 160 (269)
T 3phh_A 118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL 160 (269)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC
Confidence 899999997 99999999999999999999999999988777 54
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=96.74 E-value=0.016 Score=51.17 Aligned_cols=112 Identities=13% Similarity=0.139 Sum_probs=68.4
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhhc---C-CceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKY---A-KTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~~---~-~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
.+.|+|+ |++|.+++..|+..|. +|++.++++++++....++.... + ..++... -| .+.+
T Consensus 2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t-~d------------~~a~ 67 (294)
T 1oju_A 2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG-AD------------YSLL 67 (294)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE-SC------------GGGG
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe-CC------------HHHh
Confidence 4789999 9999999999999997 89999999988775444443322 1 1222211 11 1123
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC-CCcEEEEEcCc
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSG 194 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-~~g~Iv~vsS~ 194 (320)
.. -|++|..+|.... + ..+.. +.+..|.-- ++...+.+.+. +.+.|+++|--
T Consensus 68 ~~--aDiVViaag~~~k---p--G~~R~---dl~~~N~~i----~~~i~~~i~~~~p~a~iivvsNP 120 (294)
T 1oju_A 68 KG--SEIIVVTAGLARK---P--GMTRL---DLAHKNAGI----IKDIAKKIVENAPESKILVVTNP 120 (294)
T ss_dssp TT--CSEEEECCCCCCC---S--SCCHH---HHHHHHHHH----HHHHHHHHHTTSTTCEEEECSSS
T ss_pred CC--CCEEEECCCCCCC---C--CCcHH---HHHHHHHHH----HHHHHHHHHhhCCCeEEEEeCCc
Confidence 33 4499999997532 1 23433 335556443 44444444443 46777777753
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0031 Score=52.58 Aligned_cols=43 Identities=26% Similarity=0.399 Sum_probs=37.6
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHH
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI 97 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l 97 (320)
+++|+||+|.+|.++++.|++.|++|++++|+.++.++..+++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~ 44 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEY 44 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence 4789999999999999999999999999999988877655443
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0046 Score=55.77 Aligned_cols=41 Identities=15% Similarity=0.127 Sum_probs=36.4
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHc--CCeEEEEeCCHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKT--GLNLVLVGRNPDKLKDV 93 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~--G~~Vil~~r~~~~~~~~ 93 (320)
.|++|+|+|+ |++|...++.+... |++|+.+++++++.+..
T Consensus 170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~ 212 (344)
T 2h6e_A 170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFA 212 (344)
T ss_dssp SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHH
Confidence 5899999999 89999999888888 99999999998876644
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0066 Score=55.40 Aligned_cols=74 Identities=16% Similarity=0.153 Sum_probs=51.7
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|.+|+|+|+ |++|...++.+...|++|+.+++++++++... ++ +... .+|..+. +.++++ . .
T Consensus 194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~l-----Ga~~---vi~~~~~--~~~~~~----~-~ 256 (369)
T 1uuf_A 194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-AL-----GADE---VVNSRNA--DEMAAH----L-K 256 (369)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HH-----TCSE---EEETTCH--HHHHTT----T-T
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCcE---EeccccH--HHHHHh----h-c
Confidence 4899999998 89999999888889999999999988876543 23 2221 1344332 222222 2 2
Q ss_pred CeEEEEEccCC
Q 020854 132 DVGVLINNVGI 142 (320)
Q Consensus 132 ~id~lI~nAG~ 142 (320)
.+|++|.++|.
T Consensus 257 g~Dvvid~~g~ 267 (369)
T 1uuf_A 257 SFDFILNTVAA 267 (369)
T ss_dssp CEEEEEECCSS
T ss_pred CCCEEEECCCC
Confidence 58899999984
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=96.67 E-value=0.035 Score=50.68 Aligned_cols=43 Identities=19% Similarity=0.087 Sum_probs=38.9
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVS 94 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~ 94 (320)
+.+++|+|+|+ |.+|...++.+...|++|++++|+.++++...
T Consensus 182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~ 224 (381)
T 3p2y_A 182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVR 224 (381)
T ss_dssp ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHH
T ss_pred cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 56899999999 89999999999999999999999998877654
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0048 Score=55.05 Aligned_cols=73 Identities=12% Similarity=0.263 Sum_probs=49.1
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++|+|+||+|++|...++.+...|++|+.++++ ++ .+..+++ +... .+|..+. + .+.+...
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~-~~-~~~~~~l-----Ga~~---~i~~~~~--~---~~~~~~~-- 214 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK-RN-HAFLKAL-----GAEQ---CINYHEE--D---FLLAIST-- 214 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH-HH-HHHHHHH-----TCSE---EEETTTS--C---HHHHCCS--
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc-ch-HHHHHHc-----CCCE---EEeCCCc--c---hhhhhcc--
Confidence 48999999999999999999999999999988754 33 2333333 2221 2354443 1 1222222
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
.+|+++.++|
T Consensus 215 g~D~v~d~~g 224 (321)
T 3tqh_A 215 PVDAVIDLVG 224 (321)
T ss_dssp CEEEEEESSC
T ss_pred CCCEEEECCC
Confidence 5789999987
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=96.62 E-value=0.021 Score=51.13 Aligned_cols=117 Identities=17% Similarity=0.229 Sum_probs=71.1
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcC----CceEEEEEEeCCCCcHHHHHHHHHH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYA----KTQIKSVVVDFSGDLDEGVERIKEA 127 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 127 (320)
.+.+.|+|+ |.+|.+++..|+..|. +|++.++++++++....++..... ..++... .|. +.
T Consensus 7 ~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t-~d~------------~a 72 (324)
T 3gvi_A 7 RNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGA-NDY------------AA 72 (324)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE-SSG------------GG
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEe-CCH------------HH
Confidence 567899998 9999999999999998 999999999887765555544321 2222221 111 22
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccc
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAA 196 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~ 196 (320)
+.. -|++|..+|.... + ..+. .+.+..|.--...+.+.+..+ .+.+.++++|--..
T Consensus 73 ~~~--aDiVIiaag~p~k---~--G~~R---~dl~~~N~~i~~~i~~~i~~~---~p~a~iivvtNPvd 128 (324)
T 3gvi_A 73 IEG--ADVVIVTAGVPRK---P--GMSR---DDLLGINLKVMEQVGAGIKKY---APEAFVICITNPLD 128 (324)
T ss_dssp GTT--CSEEEECCSCCCC-------------CHHHHHHHHHHHHHHHHHHHH---CTTCEEEECCSSHH
T ss_pred HCC--CCEEEEccCcCCC---C--CCCH---HHHHHhhHHHHHHHHHHHHHH---CCCeEEEecCCCcH
Confidence 343 4499999986432 1 1122 234455655444444444332 35678888875433
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=96.58 E-value=0.001 Score=58.35 Aligned_cols=43 Identities=21% Similarity=0.292 Sum_probs=38.2
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDV 93 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~ 93 (320)
+++||+++|+|+ ||.|++++..|++.|+ +|++++|+.++.+++
T Consensus 114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~l 157 (277)
T 3don_A 114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNW 157 (277)
T ss_dssp TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTC
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence 466999999997 7999999999999999 899999999876544
|
| >4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A* | Back alignment and structure |
|---|
Probab=96.55 E-value=0.007 Score=54.49 Aligned_cols=79 Identities=24% Similarity=0.359 Sum_probs=55.0
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKT-GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~-G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|++|+|+|+ ||+|...+..+... |++|+.+++++++++.. .++ +... .+|..+. +..+++.+..+.
T Consensus 163 ~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~-~~~-----Ga~~---~i~~~~~--~~~~~v~~~t~g 230 (348)
T 4eez_A 163 PGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLA-KKI-----GADV---TINSGDV--NPVDEIKKITGG 230 (348)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHH-HHT-----TCSE---EEEC-CC--CHHHHHHHHTTS
T ss_pred CCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhh-hhc-----CCeE---EEeCCCC--CHHHHhhhhcCC
Confidence 4899999987 77887777777765 68999999999876532 222 2221 2344444 566777777777
Q ss_pred CCeEEEEEccCC
Q 020854 131 LDVGVLINNVGI 142 (320)
Q Consensus 131 ~~id~lI~nAG~ 142 (320)
.++|.++.++|.
T Consensus 231 ~g~d~~~~~~~~ 242 (348)
T 4eez_A 231 LGVQSAIVCAVA 242 (348)
T ss_dssp SCEEEEEECCSC
T ss_pred CCceEEEEeccC
Confidence 778889888763
|
| >3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 | Back alignment and structure |
|---|
Probab=96.54 E-value=0.077 Score=47.48 Aligned_cols=117 Identities=18% Similarity=0.092 Sum_probs=72.7
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhhcC---CceEEEEEEeCCCCcHHHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYA---KTQIKSVVVDFSGDLDEGVERIKE 126 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~ 126 (320)
..+.+.|+|+ |.+|..++..++..|. +|++.|+++++++..+.++....+ ..++.. ..|..+
T Consensus 20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~-t~d~~~----------- 86 (330)
T 3ldh_A 20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVS-GKDYSV----------- 86 (330)
T ss_dssp CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEE-ESSSCS-----------
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEE-cCCHHH-----------
Confidence 3577999999 9999999999999996 899999999988877777754321 112211 112211
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcc
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGA 195 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~ 195 (320)
+. +-|++|..||.... + ..+. .+.+..|.--.-.+.+.+..+ .+.+.++++|--.
T Consensus 87 -~~--daDiVIitaG~p~k---p--G~tR---~dll~~N~~I~k~i~~~I~k~---~P~a~ilvvtNPv 141 (330)
T 3ldh_A 87 -SA--GSKLVVITAGARQQ---E--GESR---LNLVQRNVNIFKFIIPNIVKH---SPDCLKELHPELG 141 (330)
T ss_dssp -CS--SCSEEEECCSCCCC---S--SCCT---TGGGHHHHHHHHHHHHHHHHH---CTTCEEEECSSSH
T ss_pred -hC--CCCEEEEeCCCCCC---C--CCCH---HHHHHhhHHHHHHHHHHHHhh---CCCceEEeCCCcc
Confidence 22 34599999997542 1 1222 123344544444444444332 4567888887543
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* | Back alignment and structure |
|---|
Probab=96.52 E-value=0.013 Score=52.71 Aligned_cols=78 Identities=22% Similarity=0.284 Sum_probs=55.1
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKT-GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~-G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|++|+|+|+ |++|...++-+... |++|+.+++++++++.. +++ +... . .|..+ +..+++.+..+.
T Consensus 171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~-~~l-----Ga~~-~--i~~~~---~~~~~v~~~t~g 237 (345)
T 3jv7_A 171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALA-REV-----GADA-A--VKSGA---GAADAIRELTGG 237 (345)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHH-HHT-----TCSE-E--EECST---THHHHHHHHHGG
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHc-----CCCE-E--EcCCC---cHHHHHHHHhCC
Confidence 4899999998 99999888777666 68999999999887643 222 2221 1 23222 455666666665
Q ss_pred CCeEEEEEccCC
Q 020854 131 LDVGVLINNVGI 142 (320)
Q Consensus 131 ~~id~lI~nAG~ 142 (320)
..+|+++.++|.
T Consensus 238 ~g~d~v~d~~G~ 249 (345)
T 3jv7_A 238 QGATAVFDFVGA 249 (345)
T ss_dssp GCEEEEEESSCC
T ss_pred CCCeEEEECCCC
Confidence 578899999883
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0053 Score=55.70 Aligned_cols=75 Identities=15% Similarity=0.191 Sum_probs=51.3
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++|+|+|+ |++|...++.+...|++|+.+++++++.+...+++ +... .+|..+. + .+.+..+
T Consensus 180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~l-----Ga~~---vi~~~~~--~---~~~~~~~-- 243 (357)
T 2cf5_A 180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDL-----GADD---YVIGSDQ--A---KMSELAD-- 243 (357)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTS-----CCSC---EEETTCH--H---HHHHSTT--
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHc-----CCce---eeccccH--H---HHHHhcC--
Confidence 5899999995 99999999988889999999999988765543222 2211 1243331 2 2222222
Q ss_pred CeEEEEEccCC
Q 020854 132 DVGVLINNVGI 142 (320)
Q Consensus 132 ~id~lI~nAG~ 142 (320)
.+|++|.++|.
T Consensus 244 g~D~vid~~g~ 254 (357)
T 2cf5_A 244 SLDYVIDTVPV 254 (357)
T ss_dssp TEEEEEECCCS
T ss_pred CCCEEEECCCC
Confidence 58899999984
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0053 Score=56.80 Aligned_cols=46 Identities=20% Similarity=0.370 Sum_probs=41.1
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSI 97 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l 97 (320)
+.|++++|.|+ |++|+.+++.+...|+ +|++++|+.++.++.++++
T Consensus 165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~ 211 (404)
T 1gpj_A 165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL 211 (404)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH
T ss_pred ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence 57999999998 9999999999999998 8999999998876666555
|
| >4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A | Back alignment and structure |
|---|
Probab=96.41 E-value=0.012 Score=56.74 Aligned_cols=89 Identities=15% Similarity=0.230 Sum_probs=65.4
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCH-------------------HHHHHHHHHHHhhcCCceEEEE
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP-------------------DKLKDVSDSIQAKYAKTQIKSV 109 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~ 109 (320)
++++..|+|.|+ ||+|.++++.|+..|. +++++|.+. .+.+.+++.+++.+|...+..+
T Consensus 323 kL~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~ 401 (615)
T 4gsl_A 323 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV 401 (615)
T ss_dssp HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEe
Confidence 477999999987 7999999999999997 899998864 5778888999999988888887
Q ss_pred EEeCC-------CC--cHHHHHHHHHHHcCCCeEEEEEccC
Q 020854 110 VVDFS-------GD--LDEGVERIKEAIEGLDVGVLINNVG 141 (320)
Q Consensus 110 ~~D~~-------~~--~~~~~~~~~~~~~~~~id~lI~nAG 141 (320)
..++. ++ .....+.+.+.+.+.| +||++..
T Consensus 402 ~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~D--lVvd~tD 440 (615)
T 4gsl_A 402 KLSIPMIGHKLVNEEAQHKDFDRLRALIKEHD--IIFLLVD 440 (615)
T ss_dssp CCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCS--EEEECCS
T ss_pred eccccccCccccchhhhcCCHHHHHHHhhcCC--EEEecCC
Confidence 76552 11 0111233444455545 8887754
|
| >2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=96.40 E-value=0.053 Score=48.50 Aligned_cols=118 Identities=12% Similarity=0.204 Sum_probs=72.0
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhhcC-CceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYA-KTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
+...+.|+|| |++|.+++..++..+. +|++.|+++++++..+.++....+ ...+... .| . .+.+
T Consensus 8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~~---~--------~~a~ 74 (326)
T 2zqz_A 8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIY-SA---E--------YSDA 74 (326)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-EC---C--------GGGG
T ss_pred CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEE-EC---C--------HHHh
Confidence 3467999999 9999999999998885 799999999988877777754321 0112111 12 1 1123
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcc
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGA 195 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~ 195 (320)
.. -|++|..+|.... + ..+.. +.+..|.--...+.+.+..+ .+.+.|+++|--.
T Consensus 75 ~~--aDvVii~ag~~~k---~--g~~R~---dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNPv 128 (326)
T 2zqz_A 75 KD--ADLVVITAGAPQK---P--GETRL---DLVNKNLKILKSIVDPIVDS---GFNGIFLVAANPV 128 (326)
T ss_dssp GG--CSEEEECCCCC----------CHH---HHHHHHHHHHHHHHHHHHHH---TCCSEEEECSSSH
T ss_pred CC--CCEEEEcCCCCCC---C--CCCHH---HHHHHHHHHHHHHHHHHHHH---CCCeEEEEeCCcH
Confidence 43 4499999987432 1 22322 34455555554454444332 4678888875533
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=96.38 E-value=0.069 Score=47.53 Aligned_cols=115 Identities=14% Similarity=0.290 Sum_probs=69.2
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhhcC--CceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYA--KTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
...+.|+|| |.+|..++..|+.+|. .|++.|+++++++..+.++....+ +..+... .| . .+.+
T Consensus 6 ~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~~---~--------~~a~ 72 (317)
T 3d0o_A 6 GNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK-AG---E--------YSDC 72 (317)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE-EC---C--------GGGG
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE-eC---C--------HHHh
Confidence 457899999 9999999999999884 899999999887765555543211 1122221 12 1 1123
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcC
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGS 193 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS 193 (320)
.. -|++|..+|.... + ..+.. ..+..|.--...+.+.+.++ .+.+.|+++|-
T Consensus 73 ~~--aDvVvi~ag~~~~---~--g~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~viv~tN 124 (317)
T 3d0o_A 73 HD--ADLVVICAGAAQK---P--GETRL---DLVSKNLKIFKSIVGEVMAS---KFDGIFLVATN 124 (317)
T ss_dssp TT--CSEEEECCCCCCC---T--TCCHH---HHHHHHHHHHHHHHHHHHHT---TCCSEEEECSS
T ss_pred CC--CCEEEECCCCCCC---C--CCcHH---HHHHHHHHHHHHHHHHHHHh---CCCcEEEEecC
Confidence 33 4499999987542 1 22332 33455555444444444332 35677777654
|
| >4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major} | Back alignment and structure |
|---|
Probab=96.32 E-value=0.093 Score=47.27 Aligned_cols=118 Identities=19% Similarity=0.202 Sum_probs=69.1
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-------eEEEEeCCH--HHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-------NLVLVGRNP--DKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVE 122 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-------~Vil~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~ 122 (320)
..-.|.||||+|+||..++..|+.... .+.+.|.++ +.++-.+-++............ ..++
T Consensus 23 ~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~---~~~~------ 93 (345)
T 4h7p_A 23 SAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVV---VTAD------ 93 (345)
T ss_dssp CCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEE---EESC------
T ss_pred CCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEE---EcCC------
Confidence 356799999999999999999987543 688999875 3455555566542212211111 1222
Q ss_pred HHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhc-C-CCcEEEEEcC
Q 020854 123 RIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK-R-KKGAIVNIGS 193 (320)
Q Consensus 123 ~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~-~-~~g~Iv~vsS 193 (320)
..+.+...| ++|..||.... + .++.++ .++.|..=. +...+.+.+ . +...|+.+|-
T Consensus 94 -~~~a~~~ad--vVvi~aG~prk---p--GmtR~D---Ll~~Na~I~----~~~~~~i~~~a~~~~~vlvvsN 151 (345)
T 4h7p_A 94 -PRVAFDGVA--IAIMCGAFPRK---A--GMERKD---LLEMNARIF----KEQGEAIAAVAASDCRVVVVGN 151 (345)
T ss_dssp -HHHHTTTCS--EEEECCCCCCC---T--TCCHHH---HHHHHHHHH----HHHHHHHHHHSCTTCEEEECSS
T ss_pred -hHHHhCCCC--EEEECCCCCCC---C--CCCHHH---HHHHhHHHH----HHHHHHHHhhccCceEEEEeCC
Confidence 123344445 99999997542 2 345543 456665544 444444443 2 3455666654
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A | Back alignment and structure |
|---|
Probab=96.29 E-value=0.0037 Score=56.71 Aligned_cols=37 Identities=22% Similarity=0.297 Sum_probs=31.6
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD 88 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~ 88 (320)
.|++|+|+||+|++|...++-+...|++++.+.++.+
T Consensus 167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~ 203 (357)
T 1zsy_A 167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRP 203 (357)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCS
T ss_pred CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCcc
Confidence 4899999999999999998887788999888776543
|
| >1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.26 E-value=0.049 Score=48.56 Aligned_cols=116 Identities=16% Similarity=0.256 Sum_probs=68.2
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhhcC-CceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYA-KTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
..+.|+|| |++|.+++..|+..+. +|++.|+++++++..+.++....+ ...+... .| . .+.+..
T Consensus 6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~-~~---~--------~~a~~~ 72 (318)
T 1ez4_A 6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY-SG---E--------YSDCKD 72 (318)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE-EC---C--------GGGGTT
T ss_pred CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEE-EC---C--------HHHhCC
Confidence 56999999 9999999999998885 799999999988877777755321 0111111 12 1 112343
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcc
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGA 195 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~ 195 (320)
-|++|..+|.... + ..+. .+.+..|.--...+.+.+..+ .+.+.|+++|--.
T Consensus 73 --aDvVii~ag~~~~---~--g~~R---~dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNPv 124 (318)
T 1ez4_A 73 --ADLVVITAGAPQK---P--GESR---LDLVNKNLNILSSIVKPVVDS---GFDGIFLVAANPV 124 (318)
T ss_dssp --CSEEEECCCC------------------CHHHHHHHHHHHHHHHHHT---TCCSEEEECSSSH
T ss_pred --CCEEEECCCCCCC---C--CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCeEEEEeCCcH
Confidence 4499999987532 1 1111 223445554444444443322 3578888875533
|
| >1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1 | Back alignment and structure |
|---|
Probab=96.26 E-value=0.0088 Score=54.42 Aligned_cols=47 Identities=19% Similarity=0.203 Sum_probs=41.4
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI 97 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l 97 (320)
++.||+|+|.|+ |.+|..+|+.|.+.|++|++.+++.+++++.++++
T Consensus 170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ 216 (364)
T 1leh_A 170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE 216 (364)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence 466999999997 88999999999999999999999998887766654
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=96.26 E-value=0.046 Score=48.80 Aligned_cols=115 Identities=14% Similarity=0.208 Sum_probs=71.7
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhc----CCceEEEEEEeCCCCcHHHHHHHHHH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKY----AKTQIKSVVVDFSGDLDEGVERIKEA 127 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~ 127 (320)
.+.+.|+|+ |.+|.+++..|+..|. +|++.++++++++..+.++.... ...++... ++ .+.
T Consensus 5 ~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t-----~d--------~~a 70 (321)
T 3p7m_A 5 RKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT-----ND--------YKD 70 (321)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE-----SC--------GGG
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc-----CC--------HHH
Confidence 456888885 9999999999999887 99999999988776666665421 12222211 11 022
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCc
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSG 194 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~ 194 (320)
+.. -|++|..+|.... + ..+. .+.+..|.--.-.+.+.+..+ .+.+.++++|--
T Consensus 71 ~~~--aDvVIi~ag~p~k---~--G~~R---~dl~~~N~~i~~~i~~~i~~~---~p~a~vivvtNP 124 (321)
T 3p7m_A 71 LEN--SDVVIVTAGVPRK---P--GMSR---DDLLGINIKVMQTVGEGIKHN---CPNAFVICITNP 124 (321)
T ss_dssp GTT--CSEEEECCSCCCC---T--TCCH---HHHHHHHHHHHHHHHHHHHHH---CTTCEEEECCSS
T ss_pred HCC--CCEEEEcCCcCCC---C--CCCH---HHHHHHhHHHHHHHHHHHHHH---CCCcEEEEecCc
Confidence 333 4499999987532 1 2333 234556665555555554332 356788887653
|
| >3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} | Back alignment and structure |
|---|
Probab=96.25 E-value=0.053 Score=48.25 Aligned_cols=113 Identities=16% Similarity=0.206 Sum_probs=67.3
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhhc----CCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKY----AKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
.+.|+|+ |.+|.+++..|+..|. +|++.++++++++..+.++.... .+.++.. .|.. +.+
T Consensus 2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~--~~~~-----------~a~ 67 (314)
T 3nep_X 2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTG--TNDY-----------GPT 67 (314)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEE--ESSS-----------GGG
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEE--CCCH-----------HHh
Confidence 4788997 9999999999999886 89999999988776666665321 1222221 1211 123
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhc-CCCcEEEEEcCcc
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK-RKKGAIVNIGSGA 195 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~-~~~g~Iv~vsS~~ 195 (320)
.. -|++|..||.... + ..+. .+.++.|.--.-.+.+. +.+ .+.+.++++|--.
T Consensus 68 ~~--aDvVii~ag~~~k---p--G~~R---~dl~~~N~~i~~~i~~~----i~~~~p~a~vivvtNPv 121 (314)
T 3nep_X 68 ED--SDVCIITAGLPRS---P--GMSR---DDLLAKNTEIVGGVTEQ----FVEGSPDSTIIVVANPL 121 (314)
T ss_dssp TT--CSEEEECCCC------------C---HHHHHHHHHHHHHHHHH----HHTTCTTCEEEECCSSH
T ss_pred CC--CCEEEECCCCCCC---C--CCCH---HHHHHhhHHHHHHHHHH----HHHhCCCcEEEecCCch
Confidence 33 4499999997532 1 1222 34456665444444444 443 3467788776533
|
| >2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=96.23 E-value=0.052 Score=48.02 Aligned_cols=112 Identities=19% Similarity=0.249 Sum_probs=64.1
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhhc---CCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKY---AKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
.+.|+|| |.+|..++..|+..|. +|+++++++++++....++.... ...++.. + +. +.+.
T Consensus 2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~--~~---------~a~~ 66 (304)
T 2v6b_A 2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---G--GH---------SELA 66 (304)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---E--CG---------GGGT
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---C--CH---------HHhC
Confidence 5789998 9999999999999998 89999999987775555553321 1112221 1 11 1233
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCc
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSG 194 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~ 194 (320)
. -|++|..+|.... + ..+. .+.+..|.--.-.+.+.+.++ .+++.|+++|-.
T Consensus 67 ~--aDvVIi~~~~~~~---~--g~~r---~dl~~~n~~i~~~i~~~i~~~---~p~~~vi~~tNP 118 (304)
T 2v6b_A 67 D--AQVVILTAGANQK---P--GESR---LDLLEKNADIFRELVPQITRA---APDAVLLVTSNP 118 (304)
T ss_dssp T--CSEEEECC--------------------CHHHHHHHHHHHHHHHHHH---CSSSEEEECSSS
T ss_pred C--CCEEEEcCCCCCC---C--CCcH---HHHHHhHHHHHHHHHHHHHHh---CCCeEEEEecCc
Confidence 3 4499999986432 1 1111 233455655555555555543 356677765543
|
| >3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A | Back alignment and structure |
|---|
Probab=96.22 E-value=0.014 Score=52.03 Aligned_cols=88 Identities=14% Similarity=0.111 Sum_probs=55.0
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHH--------HHHHHHHhhcCCceEEEEEEeCCCCcHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK--------DVSDSIQAKYAKTQIKSVVVDFSGDLDEG 120 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~--------~~~~~l~~~~~~~~~~~~~~D~~~~~~~~ 120 (320)
..++|+++.|.|. |.||+++|+.+...|++|+..+|+.+..+ ...+++-+ ...+..+.+-++++.+..
T Consensus 135 ~~l~g~tvGIiG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~---~aDiV~l~~Plt~~t~~l 210 (315)
T 3pp8_A 135 YTREEFSVGIMGA-GVLGAKVAESLQAWGFPLRCWSRSRKSWPGVESYVGREELRAFLN---QTRVLINLLPNTAQTVGI 210 (315)
T ss_dssp CCSTTCCEEEECC-SHHHHHHHHHHHTTTCCEEEEESSCCCCTTCEEEESHHHHHHHHH---TCSEEEECCCCCGGGTTC
T ss_pred CCcCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEcCCchhhhhhhhhcccCCHHHHHh---hCCEEEEecCCchhhhhh
Confidence 4577999999986 89999999999999999999998754211 11222222 456666666655433333
Q ss_pred HHHHHHHHcCCCeEEEEEccCC
Q 020854 121 VERIKEAIEGLDVGVLINNVGI 142 (320)
Q Consensus 121 ~~~~~~~~~~~~id~lI~nAG~ 142 (320)
+. .+.+...+.+.++-|.|-
T Consensus 211 i~--~~~l~~mk~gailIN~aR 230 (315)
T 3pp8_A 211 IN--SELLDQLPDGAYVLNLAR 230 (315)
T ss_dssp BS--HHHHTTSCTTEEEEECSC
T ss_pred cc--HHHHhhCCCCCEEEECCC
Confidence 31 122333333355556654
|
| >3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A | Back alignment and structure |
|---|
Probab=96.22 E-value=0.016 Score=55.85 Aligned_cols=64 Identities=14% Similarity=0.154 Sum_probs=53.2
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCC-------------------HHHHHHHHHHHHhhcCCceEEE
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRN-------------------PDKLKDVSDSIQAKYAKTQIKS 108 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~ 108 (320)
-+++++.|+|.|+ ||+|.++++.|+..|. ++.++|.+ ..+.+.+++.+++.++..++..
T Consensus 323 ~kL~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~ 401 (598)
T 3vh1_A 323 DIIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATG 401 (598)
T ss_dssp HHHHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEE
T ss_pred HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEE
Confidence 3577899999986 7999999999999997 79999764 2578888999999888888888
Q ss_pred EEEeC
Q 020854 109 VVVDF 113 (320)
Q Consensus 109 ~~~D~ 113 (320)
+..++
T Consensus 402 ~~~~I 406 (598)
T 3vh1_A 402 VKLSI 406 (598)
T ss_dssp ECCCC
T ss_pred Eeccc
Confidence 77654
|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=96.21 E-value=0.0049 Score=53.87 Aligned_cols=44 Identities=18% Similarity=0.315 Sum_probs=38.7
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK 91 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~ 91 (320)
...+.||.++|.|+|+-+|+.+|..|..+|++|.++.|+...++
T Consensus 155 ~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~L~ 198 (285)
T 3p2o_A 155 EIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLS 198 (285)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHH
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchhHH
Confidence 35678999999999999999999999999999999988765544
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* | Back alignment and structure |
|---|
Probab=96.20 E-value=0.004 Score=55.77 Aligned_cols=39 Identities=31% Similarity=0.373 Sum_probs=34.9
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV 93 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~ 93 (320)
+|+|+||+||+|...++.+...|++|+.+++++++++..
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~ 191 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL 191 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 799999999999999999888999999999998776543
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=96.19 E-value=0.03 Score=48.92 Aligned_cols=42 Identities=26% Similarity=0.327 Sum_probs=36.1
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHH
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDS 96 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~ 96 (320)
+++.|.|+ |.+|.++|+.|++.|++|++.+|+++.+++..+.
T Consensus 5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~ 46 (283)
T 4e12_A 5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR 46 (283)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence 46777765 8899999999999999999999999888776655
|
| >3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* | Back alignment and structure |
|---|
Probab=96.17 E-value=0.087 Score=46.80 Aligned_cols=115 Identities=23% Similarity=0.269 Sum_probs=70.2
Q ss_pred EEEEECCCCcHHHHHHHHHHHc-C--CeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 55 WALVTGPTDGIGKSFAFQLAKT-G--LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~-G--~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|.|+||+|.+|.+++..|..+ + .+++++++++ +.+....++........+..+. -++. .+.+..
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~~--~~~~--------~~~~~~- 69 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFS--GEDA--------TPALEG- 69 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEEC--SSCC--------HHHHTT-
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEec--CCCc--------HHHhCC-
Confidence 5889999999999999999876 5 4799999987 4554455554321111222110 0121 223343
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcC
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGS 193 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS 193 (320)
-|++|..||.... + ..+. .+.++.|.--...+.+.+..+ .+++.++++|-
T Consensus 70 -aDivii~ag~~rk---p--G~~R---~dll~~N~~I~~~i~~~i~~~---~p~a~vlvvtN 119 (312)
T 3hhp_A 70 -ADVVLISAGVARK---P--GMDR---SDLFNVNAGIVKNLVQQVAKT---CPKACIGIITN 119 (312)
T ss_dssp -CSEEEECCSCSCC---T--TCCH---HHHHHHHHHHHHHHHHHHHHH---CTTSEEEECSS
T ss_pred -CCEEEEeCCCCCC---C--CCCH---HHHHHHHHHHHHHHHHHHHHH---CCCcEEEEecC
Confidence 4499999997432 1 2343 445667776666566555442 45678888865
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* | Back alignment and structure |
|---|
Probab=96.15 E-value=0.0069 Score=53.97 Aligned_cols=40 Identities=25% Similarity=0.395 Sum_probs=36.0
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV 93 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~ 93 (320)
|+ |+|+||+|++|...++-+...|++|+.+++++++.+..
T Consensus 148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~ 187 (324)
T 3nx4_A 148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYL 187 (324)
T ss_dssp CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 56 99999999999999999889999999999998887654
|
| >1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A* | Back alignment and structure |
|---|
Probab=96.08 E-value=0.014 Score=52.86 Aligned_cols=65 Identities=20% Similarity=0.290 Sum_probs=52.9
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCC-------------------HHHHHHHHHHHHhhcCCceEEEE
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRN-------------------PDKLKDVSDSIQAKYAKTQIKSV 109 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~ 109 (320)
++++..|+|.|+ ||+|.++++.|+..|. ++.++|.+ ..+.+..++.+++.++...+..+
T Consensus 33 ~L~~~~VlivG~-GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~ 111 (346)
T 1y8q_A 33 RLRASRVLLVGL-KGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVD 111 (346)
T ss_dssp HHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEE
T ss_pred HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEE
Confidence 466899999985 7999999999999997 78898642 24678888889998888888877
Q ss_pred EEeCCC
Q 020854 110 VVDFSG 115 (320)
Q Consensus 110 ~~D~~~ 115 (320)
..++.+
T Consensus 112 ~~~~~~ 117 (346)
T 1y8q_A 112 TEDIEK 117 (346)
T ss_dssp CSCGGG
T ss_pred ecccCc
Confidence 666543
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.02 E-value=0.041 Score=49.06 Aligned_cols=115 Identities=21% Similarity=0.208 Sum_probs=66.6
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhhcCC-ceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAK-TQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
...+.|+|+ |.+|..++..|+..|. +|++.|.++++++..+.++....+- ..+... .+ + .+.+.
T Consensus 7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~~--~---------~~a~~ 73 (318)
T 1y6j_A 7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-AG--D---------YSDVK 73 (318)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C---------GGGGT
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-EC--C---------HHHhC
Confidence 346888898 9999999999999987 8999999988777656666432110 111111 11 1 12234
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcC
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGS 193 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS 193 (320)
. -|++|..+|.... + ..+. .+.+..|+--...+++.+.++ .+++.|+++|-
T Consensus 74 ~--aDvVii~~g~p~k---~--g~~r---~dl~~~n~~i~~~i~~~i~~~---~p~a~viv~tN 124 (318)
T 1y6j_A 74 D--CDVIVVTAGANRK---P--GETR---LDLAKKNVMIAKEVTQNIMKY---YNHGVILVVSN 124 (318)
T ss_dssp T--CSEEEECCCC-----------CH---HHHHHHHHHHHHHHHHHHHHH---CCSCEEEECSS
T ss_pred C--CCEEEEcCCCCCC---C--CcCH---HHHHHhhHHHHHHHHHHHHHh---CCCcEEEEecC
Confidence 3 4499999986432 1 2232 234566666666666665543 45677777644
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A | Back alignment and structure |
|---|
Probab=95.97 E-value=0.0062 Score=53.20 Aligned_cols=44 Identities=23% Similarity=0.356 Sum_probs=38.6
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVS 94 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~ 94 (320)
.++|+.++|.|+ |++|+++++.|.+.|++|++++|+.++.++..
T Consensus 126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~ 169 (275)
T 2hk9_A 126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLA 169 (275)
T ss_dssp TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHT
T ss_pred CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH
Confidence 456899999996 79999999999999999999999988766554
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=95.94 E-value=0.013 Score=65.81 Aligned_cols=83 Identities=12% Similarity=0.143 Sum_probs=57.1
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|.+|||.||+||+|.+.++-....|++|+.++++.++.+...+.....+ ... ..|..+. +..+++.+..++.
T Consensus 1667 ~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lg-a~~----v~~~~~~--~~~~~i~~~t~g~ 1739 (2512)
T 2vz8_A 1667 PGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLD-ETC----FANSRDT--SFEQHVLRHTAGK 1739 (2512)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCC-STT----EEESSSS--HHHHHHHHTTTSC
T ss_pred CCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCC-ceE----EecCCCH--HHHHHHHHhcCCC
Confidence 58999999999999999998888899999999999887665443211011 111 1233333 5566666655555
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
.+|+++++.|
T Consensus 1740 GvDvVld~~g 1749 (2512)
T 2vz8_A 1740 GVDLVLNSLA 1749 (2512)
T ss_dssp CEEEEEECCC
T ss_pred CceEEEECCC
Confidence 6888888765
|
| >1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B* | Back alignment and structure |
|---|
Probab=95.94 E-value=0.016 Score=54.07 Aligned_cols=64 Identities=14% Similarity=0.230 Sum_probs=51.7
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCH-------------------HHHHHHHHHHHhhcCCceEEEEE
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP-------------------DKLKDVSDSIQAKYAKTQIKSVV 110 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~ 110 (320)
+++..|+|.|+ ||+|.++++.|+..|. ++.++|.+. .+.+..++.+++.++..++..+.
T Consensus 38 L~~~~VlvvG~-GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~v~v~~~~ 116 (434)
T 1tt5_B 38 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHF 116 (434)
T ss_dssp HHTCCEEEECS-STHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEE
T ss_pred hcCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCCCCEEEEEe
Confidence 46888999987 8999999999999997 799986531 46777888888888888887777
Q ss_pred EeCCC
Q 020854 111 VDFSG 115 (320)
Q Consensus 111 ~D~~~ 115 (320)
.++.+
T Consensus 117 ~~i~~ 121 (434)
T 1tt5_B 117 NKIQD 121 (434)
T ss_dssp SCGGG
T ss_pred cccch
Confidence 66554
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=95.91 E-value=0.046 Score=50.24 Aligned_cols=43 Identities=14% Similarity=0.093 Sum_probs=38.5
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVS 94 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~ 94 (320)
+.+.+|+|+|+ |.+|...++.+...|++|++++++.++++...
T Consensus 188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~ 230 (405)
T 4dio_A 188 VPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVA 230 (405)
T ss_dssp ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence 56899999999 79999999999999999999999998866543
|
| >3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A | Back alignment and structure |
|---|
Probab=95.90 E-value=0.011 Score=51.29 Aligned_cols=42 Identities=5% Similarity=0.138 Sum_probs=37.1
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD 92 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~ 92 (320)
+.||.++|.|+|+-.|+.+|+.|.++|++|+++.++...+++
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~~ 189 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIGS 189 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHH
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHHH
Confidence 679999999999999999999999999999999876554443
|
| >2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A | Back alignment and structure |
|---|
Probab=95.89 E-value=0.025 Score=50.79 Aligned_cols=40 Identities=20% Similarity=0.149 Sum_probs=35.6
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKL 90 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~ 90 (320)
.+.|+++.|.|. |.||.++|+.+...|++|+..+|+.++.
T Consensus 152 ~l~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~ 191 (330)
T 2gcg_A 152 GLTQSTVGIIGL-GRIGQAIARRLKPFGVQRFLYTGRQPRP 191 (330)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHGGGTCCEEEEESSSCCH
T ss_pred CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcch
Confidence 477999999987 9999999999999999999999876543
|
| >2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* | Back alignment and structure |
|---|
Probab=95.89 E-value=0.13 Score=45.30 Aligned_cols=113 Identities=13% Similarity=0.150 Sum_probs=68.8
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhhcC--CceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYA--KTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|.|+|+ |++|..+|..|..+|. ++++.|.++++.+..+.++....+ +........+ |. +.+..
T Consensus 2 KV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~--d~---------~~~~~ 69 (294)
T 2x0j_A 2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DY---------SLLKG 69 (294)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEES--CG---------GGGTT
T ss_pred EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCC--CH---------HHhCC
Confidence 3678895 9999999999998874 799999999887777777754221 1111222111 11 11233
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC-CCcEEEEEcC
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGS 193 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-~~g~Iv~vsS 193 (320)
.| ++|..||.... | .++.+ +.++.|.. +++.+.+.+.+. +++.++.+|-
T Consensus 70 aD--vVvitAG~prk---p--GmtR~---dLl~~Na~----I~~~i~~~i~~~~p~aivlvvsN 119 (294)
T 2x0j_A 70 SE--IIVVTAGLARK---P--GMTRL---DLAHKNAG----IIKDIAKKIVENAPESKILVVTN 119 (294)
T ss_dssp CS--EEEECCCCCCC---S--SSCHH---HHHHHHHH----HHHHHHHHHHTTSTTCEEEECSS
T ss_pred CC--EEEEecCCCCC---C--CCchH---HHHHHHHH----HHHHHHHHHHhcCCceEEEEecC
Confidence 35 99999997542 2 34554 34566665 444444444444 4566666655
|
| >2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A* | Back alignment and structure |
|---|
Probab=95.88 E-value=0.015 Score=50.37 Aligned_cols=46 Identities=30% Similarity=0.527 Sum_probs=39.8
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI 97 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l 97 (320)
.++| +++|.|+ |++|+++++.|.+.|++|++++|+.++.++..+++
T Consensus 114 ~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~ 159 (263)
T 2d5c_A 114 PLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEF 159 (263)
T ss_dssp CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred CCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh
Confidence 4668 8999996 78999999999999999999999998877766554
|
| >2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=95.80 E-value=0.034 Score=49.48 Aligned_cols=39 Identities=13% Similarity=0.101 Sum_probs=35.2
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK 89 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~ 89 (320)
.+.|+++.|.|. |.||.++|+.+...|++|+..+|+.++
T Consensus 139 ~l~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~ 177 (313)
T 2ekl_A 139 ELAGKTIGIVGF-GRIGTKVGIIANAMGMKVLAYDILDIR 177 (313)
T ss_dssp CCTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred CCCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCCcch
Confidence 477999999975 999999999999999999999998765
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=95.79 E-value=0.018 Score=50.80 Aligned_cols=43 Identities=26% Similarity=0.257 Sum_probs=38.1
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD 92 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~ 92 (320)
..+.|++++|.|+ |+||+++++.+...|++|++.+|+.++.+.
T Consensus 153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~ 195 (300)
T 2rir_A 153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLAR 195 (300)
T ss_dssp SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 3567999999996 999999999999999999999999876544
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=95.78 E-value=0.17 Score=45.25 Aligned_cols=45 Identities=16% Similarity=0.148 Sum_probs=37.9
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQ 98 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~ 98 (320)
...+.|+|| |.+|.++|..|+..|. +|++.++++++++....++.
T Consensus 9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~ 54 (331)
T 1pzg_A 9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLS 54 (331)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHH
Confidence 457889998 9999999999999998 99999999988776544443
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=95.78 E-value=0.01 Score=59.69 Aligned_cols=78 Identities=17% Similarity=0.178 Sum_probs=54.1
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++|+|.||+||+|.+.++-....|++|+.++++. +.+... + +... ..|..+. +..+.+.+..++.
T Consensus 345 ~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~~l~--l-----ga~~---v~~~~~~--~~~~~i~~~t~g~ 411 (795)
T 3slk_A 345 PGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KWQAVE--L-----SREH---LASSRTC--DFEQQFLGATGGR 411 (795)
T ss_dssp TTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGGGSC--S-----CGGG---EECSSSS--THHHHHHHHSCSS
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hhhhhh--c-----Chhh---eeecCCh--hHHHHHHHHcCCC
Confidence 589999999999999999988888999999998765 322111 1 1111 1233333 5666777766665
Q ss_pred CeEEEEEccCC
Q 020854 132 DVGVLINNVGI 142 (320)
Q Consensus 132 ~id~lI~nAG~ 142 (320)
.+|+++++.|.
T Consensus 412 GvDvVld~~gg 422 (795)
T 3slk_A 412 GVDVVLNSLAG 422 (795)
T ss_dssp CCSEEEECCCT
T ss_pred CeEEEEECCCc
Confidence 67899988764
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=95.76 E-value=0.021 Score=52.34 Aligned_cols=43 Identities=14% Similarity=0.044 Sum_probs=38.2
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV 93 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~ 93 (320)
.+.|++|+|+|+ |++|++.++.+...|++|++++++.++.+..
T Consensus 169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~ 211 (384)
T 1l7d_A 169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQV 211 (384)
T ss_dssp EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 457999999996 8999999999999999999999998876654
|
| >1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=95.76 E-value=0.038 Score=49.02 Aligned_cols=39 Identities=23% Similarity=0.261 Sum_probs=35.2
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK 89 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~ 89 (320)
.+.|+++.|.|. |.||+++|+.+...|++|+..+|+.++
T Consensus 139 ~l~g~~vgIiG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~ 177 (307)
T 1wwk_A 139 ELEGKTIGIIGF-GRIGYQVAKIANALGMNILLYDPYPNE 177 (307)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred ccCCceEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCCCh
Confidence 477999999975 999999999999999999999998754
|
| >4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=95.74 E-value=0.013 Score=51.24 Aligned_cols=45 Identities=27% Similarity=0.419 Sum_probs=38.7
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD 92 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~ 92 (320)
...+.||.++|.|.|+-.|+.+|..|...|++|.++.+....+++
T Consensus 156 ~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~L~~ 200 (286)
T 4a5o_A 156 GADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLAD 200 (286)
T ss_dssp TCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSCHHH
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcCHHH
Confidence 356789999999999999999999999999999999876554443
|
| >1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A | Back alignment and structure |
|---|
Probab=95.72 E-value=0.019 Score=55.92 Aligned_cols=65 Identities=25% Similarity=0.332 Sum_probs=53.6
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCH-------------------HHHHHHHHHHHhhcCCceEEEE
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP-------------------DKLKDVSDSIQAKYAKTQIKSV 109 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~ 109 (320)
++.+..|+|.|+ ||+|.++++.|+..|. ++.++|.+. .+.+.+++.+++.++...+..+
T Consensus 14 kL~~s~VlVVGa-GGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP~v~V~a~ 92 (640)
T 1y8q_B 14 AVAGGRVLVVGA-GGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPKANIVAY 92 (640)
T ss_dssp HHHHCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCTTCEEEEE
T ss_pred HHhcCeEEEECc-CHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCCCCeEEEE
Confidence 356788999987 8999999999999997 899988642 3566778888888888888888
Q ss_pred EEeCCC
Q 020854 110 VVDFSG 115 (320)
Q Consensus 110 ~~D~~~ 115 (320)
..++++
T Consensus 93 ~~~i~~ 98 (640)
T 1y8q_B 93 HDSIMN 98 (640)
T ss_dssp ESCTTS
T ss_pred ecccch
Confidence 887764
|
| >2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A | Back alignment and structure |
|---|
Probab=95.70 E-value=0.11 Score=46.03 Aligned_cols=114 Identities=15% Similarity=0.175 Sum_probs=72.0
Q ss_pred EEEEECCCCcHHHHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHHHhhcC---CceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPDKLKDVSDSIQAKYA---KTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G--~~Vil~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
.+.|+|| |++|.+++..|+..+ .+|++.|+++++++..+.++....+ +.++. .+ +. +.+.
T Consensus 2 KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~---~~--~~---------~a~~ 66 (310)
T 2xxj_A 2 KVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVW---AG--SY---------GDLE 66 (310)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEE---EC--CG---------GGGT
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEE---EC--CH---------HHhC
Confidence 5889998 999999999999887 4899999999888877777754321 12222 12 11 1123
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccc
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAA 196 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~ 196 (320)
+-|++|..+|.... + ..+.. +.+..|.--...+.+.+..+ .+.+.|+++|--..
T Consensus 67 --~aD~Vii~ag~~~~---~--g~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNPv~ 120 (310)
T 2xxj_A 67 --GARAVVLAAGVAQR---P--GETRL---QLLDRNAQVFAQVVPRVLEA---APEAVLLVATNPVD 120 (310)
T ss_dssp --TEEEEEECCCCCCC---T--TCCHH---HHHHHHHHHHHHHHHHHHHH---CTTCEEEECSSSHH
T ss_pred --CCCEEEECCCCCCC---C--CcCHH---HHHHhhHHHHHHHHHHHHHH---CCCcEEEEecCchH
Confidence 56699999987542 1 22332 33455555444444444332 45788888755333
|
| >4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} | Back alignment and structure |
|---|
Probab=95.69 E-value=0.016 Score=51.02 Aligned_cols=42 Identities=21% Similarity=0.305 Sum_probs=37.1
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK 89 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~ 89 (320)
...+.||.++|.|+|+-.|+.+|..|.+.|++|.++.|....
T Consensus 160 ~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~ 201 (300)
T 4a26_A 160 GIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTST 201 (300)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCH
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 356789999999999999999999999999999999885443
|
| >3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum} | Back alignment and structure |
|---|
Probab=95.67 E-value=0.039 Score=48.50 Aligned_cols=38 Identities=24% Similarity=0.326 Sum_probs=34.3
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD 88 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~ 88 (320)
.+.|+++.|.|- |.||.++|+.+...|++|+..+|+.+
T Consensus 119 ~l~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~ 156 (290)
T 3gvx_A 119 LLYGKALGILGY-GGIGRRVAHLAKAFGMRVIAYTRSSV 156 (290)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSCC
T ss_pred eeecchheeecc-CchhHHHHHHHHhhCcEEEEEecccc
Confidence 477999999985 89999999999999999999999764
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=95.67 E-value=0.013 Score=53.01 Aligned_cols=75 Identities=13% Similarity=0.121 Sum_probs=51.6
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++|+|+|+ |++|...++.+...|++|+.+++++++++... ++ +... . +|..+. .+..+++ . .
T Consensus 179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~-v--~~~~~~-~~~~~~~----~-~ 242 (360)
T 1piw_A 179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KM-----GADH-Y--IATLEE-GDWGEKY----F-D 242 (360)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HH-----TCSE-E--EEGGGT-SCHHHHS----C-S
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-Hc-----CCCE-E--EcCcCc-hHHHHHh----h-c
Confidence 4899999999 99999999988889999999999988766443 23 2221 1 343321 0122222 2 2
Q ss_pred CeEEEEEccCC
Q 020854 132 DVGVLINNVGI 142 (320)
Q Consensus 132 ~id~lI~nAG~ 142 (320)
.+|++|.++|.
T Consensus 243 ~~D~vid~~g~ 253 (360)
T 1piw_A 243 TFDLIVVCASS 253 (360)
T ss_dssp CEEEEEECCSC
T ss_pred CCCEEEECCCC
Confidence 58899999985
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=95.64 E-value=0.085 Score=46.76 Aligned_cols=45 Identities=18% Similarity=0.149 Sum_probs=38.1
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHh
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQA 99 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~ 99 (320)
+.+.|+|| |.+|..++..|+..|. +|+++++++++++....++..
T Consensus 3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~ 48 (309)
T 1ur5_A 3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYE 48 (309)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHT
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHH
Confidence 46899999 9999999999999996 899999998888765555543
|
| >1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=95.63 E-value=0.02 Score=49.86 Aligned_cols=45 Identities=18% Similarity=0.296 Sum_probs=39.8
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSI 97 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l 97 (320)
.++.++|.|+ ||.|++++..|.+.|+ +|.+++|+.++.+++++++
T Consensus 118 ~~~~vlvlGa-Ggaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~ 163 (271)
T 1npy_A 118 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY 163 (271)
T ss_dssp TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence 4678999985 8999999999999997 7999999999988887665
|
| >4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} | Back alignment and structure |
|---|
Probab=95.60 E-value=0.069 Score=47.79 Aligned_cols=79 Identities=13% Similarity=0.060 Sum_probs=50.5
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLN-LVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~-Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|++|+|+|+ ||+|...++.+...|++ ++.+++++++++.. +++ +.. ...|..+. +..+...+..+.
T Consensus 160 ~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a-~~l-----Ga~---~~i~~~~~--~~~~~~~~~~~~ 227 (346)
T 4a2c_A 160 ENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALA-KSF-----GAM---QTFNSSEM--SAPQMQSVLREL 227 (346)
T ss_dssp TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHT-----TCS---EEEETTTS--CHHHHHHHHGGG
T ss_pred CCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHH-HHc-----CCe---EEEeCCCC--CHHHHHHhhccc
Confidence 4899999987 89999999888889986 46778888876532 333 222 12354443 222333332333
Q ss_pred CCeEEEEEccCC
Q 020854 131 LDVGVLINNVGI 142 (320)
Q Consensus 131 ~~id~lI~nAG~ 142 (320)
...|+++.++|.
T Consensus 228 ~g~d~v~d~~G~ 239 (346)
T 4a2c_A 228 RFNQLILETAGV 239 (346)
T ss_dssp CSSEEEEECSCS
T ss_pred CCcccccccccc
Confidence 346788888873
|
| >4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=95.59 E-value=0.09 Score=47.28 Aligned_cols=85 Identities=16% Similarity=0.169 Sum_probs=49.6
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHH-----HHHHHHHhhcCCceEEEEEEeCCCCcHHHH-HH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK-----DVSDSIQAKYAKTQIKSVVVDFSGDLDEGV-ER 123 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~-----~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~-~~ 123 (320)
.++||++.|.|. |.||+++|+.+...|++|+..+|+.++.. ...+++-+ ...+..+.+-.+++.+..+ ++
T Consensus 168 ~l~gktiGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~sl~ell~---~aDvVil~vP~t~~t~~li~~~ 243 (340)
T 4dgs_A 168 SPKGKRIGVLGL-GQIGRALASRAEAFGMSVRYWNRSTLSGVDWIAHQSPVDLAR---DSDVLAVCVAASAATQNIVDAS 243 (340)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCTTSCCEECSSHHHHHH---TCSEEEECC----------CHH
T ss_pred cccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCcccccCceecCCHHHHHh---cCCEEEEeCCCCHHHHHHhhHH
Confidence 577999999987 89999999999999999999998764311 01122222 4456665555554433444 34
Q ss_pred HHHHHcCCCeEEEEEcc
Q 020854 124 IKEAIEGLDVGVLINNV 140 (320)
Q Consensus 124 ~~~~~~~~~id~lI~nA 140 (320)
..+.++... ++||.+
T Consensus 244 ~l~~mk~ga--ilIN~a 258 (340)
T 4dgs_A 244 LLQALGPEG--IVVNVA 258 (340)
T ss_dssp HHHHTTTTC--EEEECS
T ss_pred HHhcCCCCC--EEEECC
Confidence 444454434 555544
|
| >3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=95.59 E-value=0.013 Score=51.13 Aligned_cols=43 Identities=21% Similarity=0.373 Sum_probs=37.3
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKL 90 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~ 90 (320)
...+.||.++|.|+|+-.|+.+|..|..+|++|+++.|+...+
T Consensus 156 ~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L 198 (285)
T 3l07_A 156 GIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDL 198 (285)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSH
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhH
Confidence 3567899999999999999999999999999999998764433
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=95.54 E-value=0.015 Score=50.23 Aligned_cols=43 Identities=19% Similarity=0.385 Sum_probs=37.2
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVS 94 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~ 94 (320)
.++| .++|.|+ ||.|++++..|++.|+ +|++++|+.++.+++.
T Consensus 106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la 149 (253)
T 3u62_A 106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALD 149 (253)
T ss_dssp CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCC
T ss_pred CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence 3468 8999987 9999999999999998 8999999998766543
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=95.54 E-value=0.026 Score=49.64 Aligned_cols=42 Identities=26% Similarity=0.281 Sum_probs=37.3
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD 92 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~ 92 (320)
.+.|++++|.|+ |+||+++++.+...|++|++++|+.++.+.
T Consensus 152 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~ 193 (293)
T 3d4o_A 152 TIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLAR 193 (293)
T ss_dssp CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred CCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence 467999999995 899999999999999999999999876543
|
| >1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2 | Back alignment and structure |
|---|
Probab=95.44 E-value=0.021 Score=49.94 Aligned_cols=46 Identities=22% Similarity=0.424 Sum_probs=39.6
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV 93 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~ 93 (320)
..++.|+.++|.|+|.-+|+.+|+.|...|++|.++.++...+++.
T Consensus 154 ~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~ 199 (288)
T 1b0a_A 154 NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHH 199 (288)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHH
T ss_pred CCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHHHH
Confidence 3467799999999999999999999999999999998777655443
|
| >1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=95.41 E-value=0.15 Score=45.31 Aligned_cols=113 Identities=14% Similarity=0.186 Sum_probs=68.0
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhhcC---CceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYA---KTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
.+.|.|+ |.+|.+++..|++.|. +|++.++++++++....++....+ ..++. . +|. +.+.
T Consensus 2 kI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~---~--~d~---------~~~~ 66 (319)
T 1a5z_A 2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIY---A--GDY---------ADLK 66 (319)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEE---E--CCG---------GGGT
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEE---e--CCH---------HHhC
Confidence 5788998 9999999999999998 999999999888776555433211 11121 1 121 1133
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcc
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGA 195 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~ 195 (320)
+.|++|..++.... + ..+. .+.+..|.--...+++.+.++ .+.+.||++|-..
T Consensus 67 --~aDvViiav~~~~~---~--g~~r---~dl~~~n~~i~~~i~~~i~~~---~~~~~ii~~tNp~ 119 (319)
T 1a5z_A 67 --GSDVVIVAAGVPQK---P--GETR---LQLLGRNARVMKEIARNVSKY---APDSIVIVVTNPV 119 (319)
T ss_dssp --TCSEEEECCCCCCC---S--SCCH---HHHHHHHHHHHHHHHHHHHHH---CTTCEEEECSSSH
T ss_pred --CCCEEEEccCCCCC---C--CCCH---HHHHHHHHHHHHHHHHHHHhh---CCCeEEEEeCCcH
Confidence 34599999886432 1 1222 123455555444555554443 3456777765433
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=95.41 E-value=0.015 Score=49.19 Aligned_cols=53 Identities=13% Similarity=0.018 Sum_probs=41.0
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~ 116 (320)
.+.++|.|+ |.+|..+++.|.+.|+ |++++++++..++.. . + +..+..|.++.
T Consensus 9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~--~--~~~i~gd~~~~ 61 (234)
T 2aef_A 9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-----S--G--ANFVHGDPTRV 61 (234)
T ss_dssp -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----T--T--CEEEESCTTCH
T ss_pred CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----c--C--CeEEEcCCCCH
Confidence 467889997 8999999999999999 999999988765432 1 2 45667777654
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=95.38 E-value=0.021 Score=51.41 Aligned_cols=41 Identities=24% Similarity=0.293 Sum_probs=36.2
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV 93 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~ 93 (320)
.|++|+|+|+ |++|...++.+...|++|+.+++++++.+..
T Consensus 176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~ 216 (348)
T 3two_A 176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDA 216 (348)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHH
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Confidence 4899999997 9999999988888999999999998887643
|
| >2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.37 E-value=0.072 Score=47.82 Aligned_cols=39 Identities=15% Similarity=0.136 Sum_probs=34.8
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK 89 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~ 89 (320)
.+.|+++.|.|- |.||.++|+.+...|++|+..+|+.++
T Consensus 162 ~l~g~tvgIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~ 200 (335)
T 2g76_A 162 ELNGKTLGILGL-GRIGREVATRMQSFGMKTIGYDPIISP 200 (335)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSCH
T ss_pred CCCcCEEEEEeE-CHHHHHHHHHHHHCCCEEEEECCCcch
Confidence 477999999975 999999999999999999999997654
|
| >2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=95.35 E-value=0.034 Score=48.98 Aligned_cols=36 Identities=19% Similarity=0.234 Sum_probs=33.0
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD 88 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~ 88 (320)
.+++.|.||.|.||.++++.|.+.|++|++++|+.+
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW 56 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence 467999999999999999999999999999999865
|
| >3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=95.35 E-value=0.077 Score=46.28 Aligned_cols=85 Identities=15% Similarity=0.173 Sum_probs=53.9
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCC---eEEEEeCCHHHHHHHHHHH--------HhhcCCceEEEEEEeCCCCcHHHH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGL---NLVLVGRNPDKLKDVSDSI--------QAKYAKTQIKSVVVDFSGDLDEGV 121 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~---~Vil~~r~~~~~~~~~~~l--------~~~~~~~~~~~~~~D~~~~~~~~~ 121 (320)
.+++.|.|+ |.+|.++++.|++.|+ +|++++|+.+++++..++. .+.-.+..+..+.+.. +..++.+
T Consensus 3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~p-~~~~~vl 80 (280)
T 3tri_A 3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVKP-HQIKMVC 80 (280)
T ss_dssp CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSCG-GGHHHHH
T ss_pred CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeCH-HHHHHHH
Confidence 355777877 8999999999999998 8999999998877765531 1111123333333311 2234555
Q ss_pred HHHHHH-HcCCCeEEEEEccC
Q 020854 122 ERIKEA-IEGLDVGVLINNVG 141 (320)
Q Consensus 122 ~~~~~~-~~~~~id~lI~nAG 141 (320)
+++... +.... ++|++++
T Consensus 81 ~~l~~~~l~~~~--iiiS~~a 99 (280)
T 3tri_A 81 EELKDILSETKI--LVISLAV 99 (280)
T ss_dssp HHHHHHHHTTTC--EEEECCT
T ss_pred HHHHhhccCCCe--EEEEecC
Confidence 666555 54433 6777655
|
| >1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A* | Back alignment and structure |
|---|
Probab=95.31 E-value=0.02 Score=50.36 Aligned_cols=44 Identities=16% Similarity=0.168 Sum_probs=38.2
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK 91 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~ 91 (320)
..++.|+.|+|.|+|.-+|+.+|+.|...|++|.++.++..+++
T Consensus 160 ~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~ 203 (301)
T 1a4i_A 160 GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD 203 (301)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcccHH
Confidence 45678999999999999999999999999999999987655443
|
| >2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=95.30 E-value=0.16 Score=44.95 Aligned_cols=110 Identities=17% Similarity=0.291 Sum_probs=67.5
Q ss_pred EEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhh----cCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 56 ALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAK----YAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 56 vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~----~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
+.|+|| |.+|..++..++..|. +|++.|+++++++..+.++... ....++... .|. +.+..
T Consensus 2 I~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t-~d~------------~a~~~ 67 (308)
T 2d4a_B 2 ITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGS-NSY------------EDMRG 67 (308)
T ss_dssp EEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SCG------------GGGTT
T ss_pred EEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEEC-CCH------------HHhCC
Confidence 678998 9999999999998887 6999999998887666666442 112233321 111 12333
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhc-CCCcEEEEEcC
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK-RKKGAIVNIGS 193 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~-~~~g~Iv~vsS 193 (320)
-|++|..+|.... + ..+.. +.+..|.- +.+...+.+.+ .+.+.++++|-
T Consensus 68 --aD~Vi~~ag~~~k---~--G~~r~---dl~~~n~~----i~~~i~~~i~~~~p~a~iiv~tN 117 (308)
T 2d4a_B 68 --SDIVLVTAGIGRK---P--GMTRE---QLLEANAN----TMADLAEKIKAYAKDAIVVITTN 117 (308)
T ss_dssp --CSEEEECCSCCCC---S--SCCTH---HHHHHHHH----HHHHHHHHHHHHCTTCEEEECCS
T ss_pred --CCEEEEeCCCCCC---C--CCcHH---HHHHHHHH----HHHHHHHHHHHHCCCeEEEEeCC
Confidence 4499999987542 2 22332 23344444 34444444443 45678888755
|
| >3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A | Back alignment and structure |
|---|
Probab=95.27 E-value=0.076 Score=47.98 Aligned_cols=39 Identities=26% Similarity=0.193 Sum_probs=34.4
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD 88 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~ 88 (320)
..+.|+++.|.|. |.||+++|+.+...|++|+..+|+..
T Consensus 160 ~~l~gktvGIIG~-G~IG~~vA~~l~~~G~~V~~~dr~~~ 198 (351)
T 3jtm_A 160 YDLEGKTIGTVGA-GRIGKLLLQRLKPFGCNLLYHDRLQM 198 (351)
T ss_dssp CCSTTCEEEEECC-SHHHHHHHHHHGGGCCEEEEECSSCC
T ss_pred ccccCCEEeEEEe-CHHHHHHHHHHHHCCCEEEEeCCCcc
Confidence 3577999999985 78999999999999999999998753
|
| >1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* | Back alignment and structure |
|---|
Probab=95.19 E-value=0.27 Score=43.50 Aligned_cols=112 Identities=19% Similarity=0.239 Sum_probs=68.5
Q ss_pred EEEEECCCCcHHHHHHHHHHHc--CCeEEEEeCCHHHHHHHHHHHHhh----cCCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 55 WALVTGPTDGIGKSFAFQLAKT--GLNLVLVGRNPDKLKDVSDSIQAK----YAKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~--G~~Vil~~r~~~~~~~~~~~l~~~----~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
.+.|+|+ |.+|..++..|++. |.+|+++++++++++....++... ....++. .+++ . +.+
T Consensus 2 kI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~-----~t~d-------~-~~l 67 (310)
T 1guz_A 2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVT-----GSND-------Y-ADT 67 (310)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEE-----EESC-------G-GGG
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEE-----ECCC-------H-HHH
Confidence 4788998 99999999999985 789999999988777554444321 1111111 1111 0 113
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcC
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGS 193 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS 193 (320)
.. -|++|..+|.... + ..+. .+.+..|..-...+.+.+.++ .+++.|+++|-
T Consensus 68 ~~--aDvViiav~~p~~---~--g~~r---~dl~~~n~~i~~~i~~~i~~~---~~~~~viv~tN 119 (310)
T 1guz_A 68 AN--SDIVIITAGLPRK---P--GMTR---EDLLMKNAGIVKEVTDNIMKH---SKNPIIIVVSN 119 (310)
T ss_dssp TT--CSEEEECCSCCCC---T--TCCH---HHHHHHHHHHHHHHHHHHHHH---CSSCEEEECCS
T ss_pred CC--CCEEEEeCCCCCC---C--CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCcEEEEEcC
Confidence 33 4499999985321 1 2222 345566666666666666554 35677777754
|
| >2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A* | Back alignment and structure |
|---|
Probab=95.17 E-value=0.031 Score=50.20 Aligned_cols=39 Identities=18% Similarity=0.292 Sum_probs=35.4
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK 89 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~ 89 (320)
.+.|+++.|.| .|.||.++|+.|...|++|+..+|+.++
T Consensus 147 ~l~g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~ 185 (334)
T 2dbq_A 147 DVYGKTIGIIG-LGRIGQAIAKRAKGFNMRILYYSRTRKE 185 (334)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred CCCCCEEEEEc-cCHHHHHHHHHHHhCCCEEEEECCCcch
Confidence 47799999998 4999999999999999999999998765
|
| >1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* | Back alignment and structure |
|---|
Probab=95.16 E-value=0.3 Score=43.12 Aligned_cols=115 Identities=15% Similarity=0.191 Sum_probs=66.5
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhhc---CCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKY---AKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
..+.|.|+ |.+|..++..|++.|. +|++++|++++++....++.... +...+. .. .+. +.+
T Consensus 8 mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~---~~-~~~---------~~~ 73 (319)
T 1lld_A 8 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSID---GS-DDP---------EIC 73 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEE---EE-SCG---------GGG
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEE---eC-CCH---------HHh
Confidence 46889998 9999999999999998 99999999877653222222211 111111 11 111 112
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcc
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGA 195 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~ 195 (320)
. +.|++|..++.... + ..+. .+.+..|..-.-.+++.+.++ .+++.|+.++-..
T Consensus 74 ~--~aD~Vii~v~~~~~---~--g~~r---~~~~~~n~~~~~~~~~~i~~~---~~~~~vi~~~Np~ 127 (319)
T 1lld_A 74 R--DADMVVITAGPRQK---P--GQSR---LELVGATVNILKAIMPNLVKV---APNAIYMLITNPV 127 (319)
T ss_dssp T--TCSEEEECCCCCCC---T--TCCH---HHHHHHHHHHHHHHHHHHHHH---CTTSEEEECCSSH
T ss_pred C--CCCEEEECCCCCCC---C--CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCceEEEecCch
Confidence 3 34599999985432 1 2232 234555655555555555552 3456666665433
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=95.16 E-value=0.01 Score=53.21 Aligned_cols=71 Identities=14% Similarity=0.027 Sum_probs=49.5
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
.++++|.|+ |.+|..++++|.++|. |+++++|+++.+ ..+ ..+..+..|.+|. + ..++.+-.+
T Consensus 115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~--------~~~~~i~gd~~~~--~----~L~~a~i~~ 177 (336)
T 1lnq_A 115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR--------SGANFVHGDPTRV--S----DLEKANVRG 177 (336)
T ss_dssp -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH--------TTCEEEESCTTSH--H----HHHHTCSTT
T ss_pred cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh--------CCcEEEEeCCCCH--H----HHHhcChhh
Confidence 467999997 8999999999999999 999999998766 321 2356777787764 2 222223224
Q ss_pred eEEEEEcc
Q 020854 133 VGVLINNV 140 (320)
Q Consensus 133 id~lI~nA 140 (320)
.|.+|...
T Consensus 178 a~~vi~~~ 185 (336)
T 1lnq_A 178 ARAVIVDL 185 (336)
T ss_dssp EEEEEECC
T ss_pred ccEEEEcC
Confidence 55676554
|
| >4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.13 E-value=0.061 Score=48.38 Aligned_cols=76 Identities=14% Similarity=0.177 Sum_probs=47.8
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcC-CeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G-~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|++|+|+||+|++|...++-....| .+|+.++ +.++.+... . +.. .. .| .+. +..+++.+..+
T Consensus 142 ~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-----~--ga~-~~--~~-~~~--~~~~~~~~~~~- 206 (349)
T 4a27_A 142 EGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-----D--SVT-HL--FD-RNA--DYVQEVKRISA- 206 (349)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-----G--GSS-EE--EE-TTS--CHHHHHHHHCT-
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-----c--CCc-EE--Ec-CCc--cHHHHHHHhcC-
Confidence 58999999999999998887766665 5777777 444443221 2 221 12 23 333 34455544333
Q ss_pred CCeEEEEEccCC
Q 020854 131 LDVGVLINNVGI 142 (320)
Q Consensus 131 ~~id~lI~nAG~ 142 (320)
..+|+++.++|.
T Consensus 207 ~g~Dvv~d~~g~ 218 (349)
T 4a27_A 207 EGVDIVLDCLCG 218 (349)
T ss_dssp TCEEEEEEECC-
T ss_pred CCceEEEECCCc
Confidence 368899999873
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=95.07 E-value=0.039 Score=48.22 Aligned_cols=41 Identities=10% Similarity=0.213 Sum_probs=36.8
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVS 94 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~ 94 (320)
+++.|.|++|.+|.++++.|++.|++|++++|+.++.+...
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~ 52 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQ 52 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence 47999999999999999999999999999999988776543
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=95.00 E-value=0.037 Score=51.22 Aligned_cols=41 Identities=20% Similarity=0.470 Sum_probs=35.5
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVS 94 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~ 94 (320)
+..|+|.|. |-+|..+++.|.+.|..|+++++|++..+...
T Consensus 4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~ 44 (413)
T 3l9w_A 4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLR 44 (413)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
Confidence 356889987 78999999999999999999999998876543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 320 | ||||
| d1xg5a_ | 257 | c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41 | 1e-38 | |
| d1spxa_ | 264 | c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato | 7e-35 | |
| d1yb1a_ | 244 | c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase | 1e-34 | |
| d1xkqa_ | 272 | c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh | 1e-32 | |
| d1hdca_ | 254 | c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr | 1e-31 | |
| d2d1ya1 | 248 | c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T | 2e-31 | |
| d2ew8a1 | 247 | c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas | 3e-31 | |
| d2bgka1 | 268 | c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de | 3e-31 | |
| d1pr9a_ | 244 | c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie | 2e-30 | |
| d1gz6a_ | 302 | c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do | 3e-30 | |
| d1zk4a1 | 251 | c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase | 6e-30 | |
| d1cyda_ | 242 | c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul | 2e-29 | |
| d1xhla_ | 274 | c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh | 3e-29 | |
| d2gdza1 | 254 | c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog | 9e-29 | |
| d2ae2a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 1e-28 | |
| d1xu9a_ | 269 | c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase | 2e-28 | |
| d2c07a1 | 251 | c.2.1.2 (A:54-304) beta-keto acyl carrier protein | 2e-28 | |
| d1ydea1 | 250 | c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase | 2e-28 | |
| d1xq1a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara | 5e-28 | |
| d2ag5a1 | 245 | c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami | 6e-28 | |
| d1sbya1 | 254 | c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase | 7e-28 | |
| d1yo6a1 | 250 | c.2.1.2 (A:1-250) Putative carbonyl reductase snif | 1e-27 | |
| d2bd0a1 | 240 | c.2.1.2 (A:2-241) Bacterial sepiapterin reductase | 3e-27 | |
| d1h5qa_ | 260 | c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga | 4e-27 | |
| d1q7ba_ | 243 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 9e-27 | |
| d1bdba_ | 276 | c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy | 2e-26 | |
| d2rhca1 | 257 | c.2.1.2 (A:5-261) beta-keto acyl carrier protein r | 2e-26 | |
| d1hxha_ | 253 | c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge | 4e-26 | |
| d1yxma1 | 297 | c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re | 7e-26 | |
| d1oaaa_ | 259 | c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus | 2e-25 | |
| d1edoa_ | 244 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 2e-25 | |
| d1ulsa_ | 242 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 3e-25 | |
| d1wmaa1 | 275 | c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox | 4e-25 | |
| d1iy8a_ | 258 | c.2.1.2 (A:) Levodione reductase {Corynebacterium | 4e-25 | |
| d1jtva_ | 285 | c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi | 5e-25 | |
| d1vl8a_ | 251 | c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga | 1e-23 | |
| d1zema1 | 260 | c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba | 8e-23 | |
| d1ja9a_ | 259 | c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc | 9e-23 | |
| d1ae1a_ | 258 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 5e-22 | |
| d1nffa_ | 244 | c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob | 6e-21 | |
| d1zmta1 | 252 | c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag | 2e-20 | |
| d1g0oa_ | 272 | c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase | 4e-20 | |
| d1ulua_ | 256 | c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph | 4e-20 | |
| d1k2wa_ | 256 | c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s | 3e-19 | |
| d1x1ta1 | 260 | c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge | 9e-19 | |
| d1o5ia_ | 234 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 9e-19 | |
| d1snya_ | 248 | c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly | 1e-18 | |
| d1w6ua_ | 294 | c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr | 2e-18 | |
| d1geea_ | 261 | c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat | 2e-18 | |
| d2o23a1 | 248 | c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr | 2e-18 | |
| d1fmca_ | 255 | c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase | 3e-18 | |
| d1gega_ | 255 | c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl | 6e-18 | |
| d1mxha_ | 266 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 9e-18 | |
| d1uaya_ | 241 | c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena | 1e-17 | |
| d2a4ka1 | 241 | c.2.1.2 (A:2-242) beta-keto acyl carrier protein r | 2e-17 | |
| d1uzma1 | 237 | c.2.1.2 (A:9-245) beta-keto acyl carrier protein r | 1e-16 | |
| d1qsga_ | 258 | c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli | 1e-16 | |
| d1ooea_ | 235 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 4e-16 | |
| d1dhra_ | 236 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 1e-15 | |
| d1fjha_ | 257 | c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase | 6e-15 | |
| d1luaa1 | 191 | c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter | 2e-10 | |
| d2pd4a1 | 274 | c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte | 8e-08 | |
| d1e7wa_ | 284 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 8e-08 | |
| d2fr1a1 | 259 | c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI | 3e-07 | |
| d1jaya_ | 212 | c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase | 5e-07 | |
| d2h7ma1 | 268 | c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri | 1e-04 | |
| d1uh5a_ | 329 | c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite | 1e-04 | |
| d1d7oa_ | 297 | c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B | 2e-04 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 3e-04 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 4e-04 | |
| d1y1pa1 | 342 | c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo | 0.002 |
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Score = 135 bits (340), Expect = 1e-38
Identities = 50/197 (25%), Positives = 83/197 (42%), Gaps = 10/197 (5%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
ALVTG + GIG + A L + GL +V R +++++ ++ + D S
Sbjct: 13 ALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN 72
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
D+ I+ G+D + INN G++ P K++ VNV + T
Sbjct: 73 EEDILSMFSAIRSQHSGVD--ICINNAGLARP--DTLLSGSTSGWKDMFNVNVLALSICT 128
Query: 174 QAVLPGMLKRK--KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR--KS 229
+ M +R G I+NI S + + + Y+ATK + + L E R ++
Sbjct: 129 REAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQT 188
Query: 230 GIDVQCQVPLYVATKMA 246
I C P V T+ A
Sbjct: 189 HIRATCISPGVVETQFA 205
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 125 bits (315), Expect = 7e-35
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 9/197 (4%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAK-YAKTQIKSVVVDFS 114
A++TG ++GIG++ A A+ G + + GR+ ++L++ I A ++ + SVV D +
Sbjct: 8 AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVT 67
Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYAR--FFHEVDQVLLKNLIKVNVEGTT 170
DE + LD +L+NN G + P ++ + +N+
Sbjct: 68 TDAGQDEILSTTLGKFGKLD--ILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVI 125
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
+T+ +P L KG IVNI S A+ + + P + Y+ KA IDQ++R+ ++ + G
Sbjct: 126 ALTKKAVP-HLSSTKGEIVNISSIASGLHAT-PDFPYYSIAKAAIDQYTRNTAIDLIQHG 183
Query: 231 IDVQCQVPLYVATKMAS 247
I V P VAT S
Sbjct: 184 IRVNSISPGLVATGFGS 200
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Score = 124 bits (313), Expect = 1e-34
Identities = 55/196 (28%), Positives = 85/196 (43%), Gaps = 9/196 (4%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G L+TG GIG+ A++ AK LVL N L++ + + AK V
Sbjct: 7 GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCS 66
Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
D+ +++K I + +L+NN G+ Y F + Q ++ +VNV
Sbjct: 67 NREDIYSSAKKVKAEIGDVS--ILVNNAGVVYTSDLFATQDPQ--IEKTFEVNVLAHFWT 122
Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE---YRKS 229
T+A LP M K G IV + S A V S P Y ++K F ++L E + +
Sbjct: 123 TKAFLPAMTKNNHGHIVTVASAAGHV--SVPFLLAYCSSKFAAVGFHKTLTDELAALQIT 180
Query: 230 GIDVQCQVPLYVATKM 245
G+ C P +V T
Sbjct: 181 GVKTTCLCPNFVNTGF 196
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Score = 119 bits (300), Expect = 1e-32
Identities = 49/196 (25%), Positives = 95/196 (48%), Gaps = 9/196 (4%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI-QAKYAKTQIKSVVVDFS 114
++TG ++GIG++ A A+ G N+ + GR+ ++L++ I ++ ++ Q+ SVV D +
Sbjct: 8 VIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVT 67
Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYP--YARFFHEVDQVLLKNLIKVNVEGTT 170
D+ + + +D VL+NN G + P + + + +K+N++
Sbjct: 68 TEDGQDQIINSTLKQFGKID--VLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVI 125
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
++T+ V P ++ K + A + P + YA KA +DQ++RS ++ K G
Sbjct: 126 EMTKKVKPHLVASKGEIVNVSSIVAGPQ--AQPDFLYYAIAKAALDQYTRSTAIDLAKFG 183
Query: 231 IDVQCQVPLYVATKMA 246
I V P V T
Sbjct: 184 IRVNSVSPGMVETGFT 199
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Score = 116 bits (292), Expect = 1e-31
Identities = 50/220 (22%), Positives = 83/220 (37%), Gaps = 16/220 (7%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
++TG G+G A Q G +VL ++ + + + +D +
Sbjct: 8 VIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDA-----ARYQHLDVTI 62
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
D V +E +D L+NN GIS V++ + ++++N+ G
Sbjct: 63 EEDWQRVVAYAREEFGSVD--GLVNNAGISTGMFLETESVERF--RKVVEINLTGVFIGM 118
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
+ V+P M G+IVNI S A ++ + S Y A+K + S+ VE I V
Sbjct: 119 KTVIPAMKDAGGGSIVNISSAAGLMGLAL--TSSYGASKWGVRGLSKLAAVELGTDRIRV 176
Query: 234 QCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEP 273
P T M + Y M +G EP
Sbjct: 177 NSVHPGMTYTPMT---AETGIRQGEGNYPNTPMGRVGNEP 213
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Score = 116 bits (291), Expect = 2e-31
Identities = 49/192 (25%), Positives = 84/192 (43%), Gaps = 16/192 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
LVTG GIG++ A A+ G + L P+ K+V+++I + VD
Sbjct: 8 VLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGGAF-------FQVDLED 59
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
+ VE A+ +DV L+NN I+ P + V + +++VN+ ++
Sbjct: 60 ERERVRFVEEAAYALGRVDV--LVNNAAIAAPGS--ALTVRLPEWRRVLEVNLTAPMHLS 115
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
M K GAIVN+ S + ++ + Y A+K + +RSL ++ I V
Sbjct: 116 ALAAREMRKVGGGAIVNVASVQGLF--AEQENAAYNASKGGLVNLTRSLALDLAPLRIRV 173
Query: 234 QCQVPLYVATKM 245
P +AT+
Sbjct: 174 NAVAPGAIATEA 185
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Score = 115 bits (289), Expect = 3e-31
Identities = 49/192 (25%), Positives = 86/192 (44%), Gaps = 12/192 (6%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
A++TG +GIG++ A + A G ++ + P + + ++ +V D S
Sbjct: 8 AVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA----AIRNLGRRVLTVKCDVSQ 63
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
GD++ +++ D +L+NN GI F E+ K ++NV+ +
Sbjct: 64 PGDVEAFGKQVISTFGRCD--ILVNNAGIYPLIP--FDELTFEQWKKTFEINVDSGFLMA 119
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
+A +PGM + G I+N+ S + Y+ Y +TKA F+R+L + K GI V
Sbjct: 120 KAFVPGMKRNGWGRIINLTSTTYWL--KIEAYTHYISTKAANIGFTRALASDLGKDGITV 177
Query: 234 QCQVPLYVATKM 245
P V T
Sbjct: 178 NAIAPSLVRTAT 189
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Score = 115 bits (290), Expect = 3e-31
Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 4/190 (2%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
A++TG GIG++ A + G +V+ D + V ++I + + + V
Sbjct: 9 AIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDE- 67
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
D+ V+ LD ++ NVG+ E K ++ +NV G V +
Sbjct: 68 DVRNLVDTTIAKHGKLD--IMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKH 125
Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
M+ KKG+IV S ++ + + VY ATK + + SL E + GI V C
Sbjct: 126 AARVMIPAKKGSIVFTASISS-FTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNC 184
Query: 236 QVPLYVATKM 245
P VA+ +
Sbjct: 185 VSPYIVASPL 194
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 113 bits (283), Expect = 2e-30
Identities = 53/192 (27%), Positives = 81/192 (42%), Gaps = 15/192 (7%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
LVTG GIG+ L TG +V V R L + I+ V VD
Sbjct: 10 VLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG------IEPVCVDLGD 63
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
E ER ++ +D +L+NN ++ + F EV + +VN+ +V+Q
Sbjct: 64 --WEATERALGSVGPVD--LLVNNAAVALL--QPFLEVTKEAFDRSFEVNLRAVIQVSQI 117
Query: 176 VLPGMLKRKKG-AIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQ 234
V G++ R AIVN+ S + +SVY +TK +D ++ + +E I V
Sbjct: 118 VARGLIARGVPGAIVNVSSQCSQRAV--TNHSVYCSTKGALDMLTKVMALELGPHKIRVN 175
Query: 235 CQVPLYVATKMA 246
P V T M
Sbjct: 176 AVNPTVVMTSMG 187
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 114 bits (286), Expect = 3e-30
Identities = 46/199 (23%), Positives = 86/199 (43%), Gaps = 12/199 (6%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKS---VVVD 112
LVTG G+G+++A A+ G +V+ D S A +I+ V
Sbjct: 10 VLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVA 69
Query: 113 FSGDLDEGVERIKEAIE---GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
++ G + +K A++ +D V++NN GI R F + + +V++ G+
Sbjct: 70 NYDSVEAGEKLVKTALDTFGRID--VVVNNAGILRD--RSFSRISDEDWDIIQRVHLRGS 125
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
+VT+A M K+ G I+ S + I + + Y+A K + + +L +E RK+
Sbjct: 126 FQVTRAAWDHMKKQNYGRIIMTASASGIY--GNFGQANYSAAKLGLLGLANTLVIEGRKN 183
Query: 230 GIDVQCQVPLYVATKMASI 248
I P + ++
Sbjct: 184 NIHCNTIAPNAGSRMTETV 202
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Score = 112 bits (280), Expect = 6e-30
Identities = 44/195 (22%), Positives = 83/195 (42%), Gaps = 10/195 (5%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
A++TG T GIG + A + + G +++ GR+ D + + S+ + D
Sbjct: 9 AIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDED- 67
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
+ + ++A + L+NN GI+ + E + L+ VN++G T+
Sbjct: 68 GWTKLFDATEKAFGPVS--TLVNNAGIAVN--KSVEETTTAEWRKLLAVNLDGVFFGTRL 123
Query: 176 VLPGMLKRKKGA-IVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY--RKSGID 232
+ M + GA I+N+ S V DP Y A+K + S+S ++ + +
Sbjct: 124 GIQRMKNKGLGASIINMSSIEGFV--GDPSLGAYNASKGAVRIMSKSAALDCALKDYDVR 181
Query: 233 VQCQVPLYVATKMAS 247
V P Y+ T +
Sbjct: 182 VNTVHPGYIKTPLVD 196
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 110 bits (276), Expect = 2e-29
Identities = 55/195 (28%), Positives = 83/195 (42%), Gaps = 15/195 (7%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G ALVTG GIG+ L +G +V V R L ++ I+ V VD
Sbjct: 5 GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG------IEPVCVD 58
Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
D D E+ I +D +L+NN + + F EV + VN+ +V
Sbjct: 59 LG-DWDA-TEKALGGIGPVD--LLVNNAALVIM--QPFLEVTKEAFDRSFSVNLRSVFQV 112
Query: 173 TQAVLPGMLKR-KKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
+Q V M+ R G+IVN+ S A V + P Y++TK + ++++ +E I
Sbjct: 113 SQMVARDMINRGVPGSIVNVSSMVAHV--TFPNLITYSSTKGAMTMLTKAMAMELGPHKI 170
Query: 232 DVQCQVPLYVATKMA 246
V P V T M
Sbjct: 171 RVNSVNPTVVLTDMG 185
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Score = 110 bits (277), Expect = 3e-29
Identities = 49/196 (25%), Positives = 84/196 (42%), Gaps = 7/196 (3%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAK-TQIKSVVV 111
G ++TG ++GIG+S A AK G + + GRN D+L++ I +I +VV
Sbjct: 4 GKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVA 63
Query: 112 DFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
D + D+ + +D +L+NN G + + L + K+N +
Sbjct: 64 DVTEASGQDDIINTTLAKFGKID--ILVNNAGANLADGTANTDQPVELYQKTFKLNFQAV 121
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
++TQ ++K K + A Y YA KA +DQ++R ++ +
Sbjct: 122 IEMTQKTKEHLIKTKGEIVNVSSIVAGPQAH--SGYPYYACAKAALDQYTRCTAIDLIQH 179
Query: 230 GIDVQCQVPLYVATKM 245
G+ V P VAT
Sbjct: 180 GVRVNSVSPGAVATGF 195
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Score = 108 bits (272), Expect = 9e-29
Identities = 47/200 (23%), Positives = 82/200 (41%), Gaps = 21/200 (10%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G ALVTG GIG++FA L G + LV N + ++ ++ + + D
Sbjct: 3 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCD 62
Query: 113 FS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
+ L + ++ + LD +L+NN G++ +++N+
Sbjct: 63 VADQQQLRDTFRKVVDHFGRLD--ILVNNAGVNNEKNWEKT----------LQINLVSVI 110
Query: 171 KVTQAVLPGMLKRKK---GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSR--SLYVE 225
T L M K+ G I+N+ S A ++ VY A+K I F+R +L
Sbjct: 111 SGTYLGLDYMSKQNGGEGGIIINMSSLAGLM--PVAQQPVYCASKHGIVGFTRSAALAAN 168
Query: 226 YRKSGIDVQCQVPLYVATKM 245
SG+ + P +V T +
Sbjct: 169 LMNSGVRLNAICPGFVNTAI 188
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Score = 108 bits (271), Expect = 1e-28
Identities = 49/194 (25%), Positives = 84/194 (43%), Gaps = 5/194 (2%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G ALVTG + GIG +LA G ++ RN +L D ++K K + +
Sbjct: 8 GCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLS 67
Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
+ E + + G + +L+NN GI + + ++ +N E +
Sbjct: 68 SRSERQELMNTVANHFHG-KLNILVNNAGIVIY--KEAKDYTVEDYSLIMSINFEAAYHL 124
Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
+ P + ++G +V I S + + + P +VY ATK +DQ +R L E+ K I
Sbjct: 125 SVLAHPFLKASERGNVVFISSVSGAL--AVPYEAVYGATKGAMDQLTRCLAFEWAKDNIR 182
Query: 233 VQCQVPLYVATKMA 246
V P +AT +
Sbjct: 183 VNGVGPGVIATSLV 196
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 108 bits (271), Expect = 2e-28
Identities = 53/250 (21%), Positives = 103/250 (41%), Gaps = 11/250 (4%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G +VTG + GIG+ A+ LAK G ++V+ R+ + L+ V A + +
Sbjct: 14 GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAH--YIAG 71
Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
D+ + + +A + + ++ I+ D ++ ++VN +
Sbjct: 72 TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLN-LFHDDIHHVRKSMEVNFLSYVVL 130
Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
T A LP MLK+ G+IV + S A V + P+ + Y+A+K +D F S+ EY S ++
Sbjct: 131 TVAALP-MLKQSNGSIVVVSSLAGKV--AYPMVAAYSASKFALDGFFSSIRKEYSVSRVN 187
Query: 233 VQCQV--PLYVATKMASIKRSSFFVP---STDVYARAAMRWIGYEPCCTPYWPHSFIWGV 287
V + + T+ A S + A ++ Y + +
Sbjct: 188 VSITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGALRQEEVYYDSSLWTTLL 247
Query: 288 LSILPEKLID 297
+ K+++
Sbjct: 248 IRNPSRKILE 257
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Score = 107 bits (269), Expect = 2e-28
Identities = 43/191 (22%), Positives = 79/191 (41%), Gaps = 6/191 (3%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
ALVTG GIG+ A LAK+ +++ + R V D I++ + D S
Sbjct: 13 ALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKS--FGYESSGYAGDVSK 70
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
E + + I V I F + +++++ N+ +TQ
Sbjct: 71 --KEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQP 128
Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
+ M+ + G I+NI S + + + Y+++KA + F++SL E I V
Sbjct: 129 ISKRMINNRYGRIINISSIVGLT--GNVGQANYSSSKAGVIGFTKSLAKELASRNITVNA 186
Query: 236 QVPLYVATKMA 246
P ++++ M
Sbjct: 187 IAPGFISSDMT 197
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Score = 107 bits (269), Expect = 2e-28
Identities = 38/192 (19%), Positives = 77/192 (40%), Gaps = 14/192 (7%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
+VTG GIG +G +V+ ++ + + + ++ D +
Sbjct: 9 VVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVF------ILCDVTQ 62
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
D+ V LD V N +P + E + L+++N+ GT +T
Sbjct: 63 EDDVKTLVSETIRRFGRLDCVV---NNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLT 119
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
+ LP + ++ +G ++NI S + + Y ATK + +++L ++ G+ V
Sbjct: 120 KLALPYL-RKSQGNVINISSLVGAIGQAQ--AVPYVATKGAVTAMTKALALDESPYGVRV 176
Query: 234 QCQVPLYVATKM 245
C P + T +
Sbjct: 177 NCISPGNIWTPL 188
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 107 bits (268), Expect = 5e-28
Identities = 47/192 (24%), Positives = 79/192 (41%), Gaps = 5/192 (2%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
LVTG T GIG + + A G + RN +L + Q K +
Sbjct: 11 VLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRP 70
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
+ ++ ++ + G + +LINN+G + I N+E ++Q
Sbjct: 71 EREKLMQTVSSMFGG-KLDILINNLGAIRSKP--TLDYTAEDFSFHISTNLESAYHLSQL 127
Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
P + G I+ + S A +V S S+Y+ATK ++Q +R+L E+ GI
Sbjct: 128 AHPLLKASGCGNIIFMSSIAGVVSASV--GSIYSATKGALNQLARNLACEWASDGIRANA 185
Query: 236 QVPLYVATKMAS 247
P +AT +A
Sbjct: 186 VAPAVIATPLAE 197
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 106 bits (266), Expect = 6e-28
Identities = 43/190 (22%), Positives = 79/190 (41%), Gaps = 14/190 (7%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
++T GIG++ A A+ G ++ N KL+++ +
Sbjct: 9 IILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVL----------- 57
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
D+ + + + A E + VL N G + + ++ + +NV + +A
Sbjct: 58 DVTKKKQIDQFANEVERLDVLFNVAGFVHH--GTVLDCEEKDWDFSMNLNVRSMYLMIKA 115
Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
LP ML +K G I+N+ S A+ V VY+ TKA + ++S+ ++ + GI C
Sbjct: 116 FLPKMLAQKSGNIINMSSVASSVKGVVN-RCVYSTTKAAVIGLTKSVAADFIQQGIRCNC 174
Query: 236 QVPLYVATKM 245
P V T
Sbjct: 175 VCPGTVDTPS 184
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Score = 106 bits (266), Expect = 7e-28
Identities = 44/194 (22%), Positives = 76/194 (39%), Gaps = 17/194 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
+ GIG + +L K L ++ + +++ ++A K I D +
Sbjct: 8 VIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAE-LKAINPKVNITFHTYDVTV 66
Query: 116 DLDEGVERIKEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
+ E + +K+ + L V +LIN GI H++++ I +N G T
Sbjct: 67 PVAESKKLLKKIFDQLKTVDILINGAGILDD-----HQIERT-----IAINFTGLVNTTT 116
Query: 175 AVLPGMLKR---KKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
A+L KR G I NI S + VY+A+KA + F+ SL +G+
Sbjct: 117 AILDFWDKRKGGPGGIIANICSVTGFN--AIHQVPVYSASKAAVVSFTNSLAKLAPITGV 174
Query: 232 DVQCQVPLYVATKM 245
P T +
Sbjct: 175 TAYSINPGITRTPL 188
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Score = 105 bits (263), Expect = 1e-27
Identities = 41/211 (19%), Positives = 81/211 (38%), Gaps = 26/211 (12%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDF 113
+VTG GIG QL K +++ R+ +K ++ ++ + + +
Sbjct: 6 VVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSR-----VHVLPLTV 60
Query: 114 S--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
+ LD V ++ E + + +LINN G+ Y E ++ ++ + VN
Sbjct: 61 TCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYG-TNTEPNRAVIAEQLDVNTTSVVL 119
Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIP----------------SDPLYSVYAATKAYI 215
+TQ +LP + + S + + + Y +KA I
Sbjct: 120 LTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAI 179
Query: 216 DQFSRSLYVEYRKSGIDVQCQVPLYVATKMA 246
+ F R+L V+ + + V P +V T +
Sbjct: 180 NMFGRTLAVDLKDDNVLVVNFCPGWVQTNLG 210
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Score = 104 bits (261), Expect = 3e-27
Identities = 47/197 (23%), Positives = 79/197 (40%), Gaps = 13/197 (6%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLN-------LVLVGRNPDKLKDVSDSIQAKYAKTQIKS 108
L+TG GIG++ A + A+ + LVL R L+ +S +A+ A T +
Sbjct: 4 LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTIT 63
Query: 109 VVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEG 168
+ D+ I E +D +NN G+ A + + N++G
Sbjct: 64 ADISDMADVRRLTTHIVERYGHIDCL--VNNAGVGRFGALSDLTEEDF--DYTMNTNLKG 119
Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
T +TQA+ M ++ G I I S AA + S+Y +K ++ + RK
Sbjct: 120 TFFLTQALFALMERQHSGHIFFITSVAATK--AFRHSSIYCMSKFGQRGLVETMRLYARK 177
Query: 229 SGIDVQCQVPLYVATKM 245
+ + P V T M
Sbjct: 178 CNVRITDVQPGAVYTPM 194
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Score = 104 bits (261), Expect = 4e-27
Identities = 43/200 (21%), Positives = 83/200 (41%), Gaps = 13/200 (6%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
+VTG GIG +F +A G N+ ++ R+ +V++ + ++ + K+ D S
Sbjct: 12 IIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVSN 70
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
+ + +++I + + LI N G+S E+ + VNV G
Sbjct: 71 TDIVTKTIQQIDADLGPIS--GLIANAGVSVVKP--ATELTHEDFAFVYDVNVFGVFNTC 126
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSD------PLYSVYAATKAYIDQFSRSLYVEYR 227
+AV L++++ + + S + I + Y ++KA + L E+
Sbjct: 127 RAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWA 186
Query: 228 KSGIDVQCQVPLYVATKMAS 247
+GI V P YV T +
Sbjct: 187 SAGIRVNALSPGYVNTDQTA 206
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Score = 103 bits (257), Expect = 9e-27
Identities = 55/218 (25%), Positives = 101/218 (46%), Gaps = 12/218 (5%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G ALVTG + GIG++ A LA G ++ + + + +SD + A K ++++
Sbjct: 4 GKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANG-----KGLMLN 58
Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
+ K E +V +L+NN GI+ + ++ ++I+ N+ ++
Sbjct: 59 VTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEW--NDIIETNLSSVFRL 116
Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
++AV+ M+K++ G I+ IGS + + + YAA KA + FS+SL E GI
Sbjct: 117 SKAVMRAMMKKRHGRIITIGSVVGTM--GNGGQANYAAAKAGLIGFSKSLAREVASRGIT 174
Query: 233 VQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIG 270
V P ++ T M R+ + A+ +G
Sbjct: 175 VNVVAPGFIETDM---TRALSDDQRAGILAQVPAGRLG 209
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Score = 103 bits (258), Expect = 2e-26
Identities = 32/195 (16%), Positives = 66/195 (33%), Gaps = 16/195 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
L+TG G+G++ + G + ++ ++ ++L ++ + +V D
Sbjct: 8 VLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAEL-----ETDHGDNVLGIVGDVRS 62
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLL---KNLIKVNVEGTT 170
D + R +D + N GI ++ L + +NV+G
Sbjct: 63 LEDQKQAASRCVARFGKIDTLI--PNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYI 120
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
+A LP ++ + I I + +Y A K I R L E
Sbjct: 121 HAVKACLPALVASRGNVIFTISNAGFYPNGG---GPLYTAAKHAIVGLVRELAFELAP-Y 176
Query: 231 IDVQCQVPLYVATKM 245
+ V + + +
Sbjct: 177 VRVNGVGSGGINSDL 191
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Score = 102 bits (256), Expect = 2e-26
Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 4/192 (2%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
ALVTG T GIG A +L K GL + + R + L+ ++ + ++ V
Sbjct: 5 ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 64
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
+++ V + E +DV V NN G A E+ L ++++ N+ G +VT+
Sbjct: 65 EIEALVAAVVERYGPVDVLV--NNAGRPGGGA--TAELADELWLDVVETNLTGVFRVTKQ 120
Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
VL ++G + + + Y+A+K + F+++L +E ++GI V
Sbjct: 121 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 180
Query: 236 QVPLYVATKMAS 247
P +V T MA+
Sbjct: 181 VCPGFVETPMAA 192
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 101 bits (254), Expect = 4e-26
Identities = 47/195 (24%), Positives = 77/195 (39%), Gaps = 16/195 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
ALVTG G+G L G + N + ++ + + V D S
Sbjct: 9 ALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGER-----SMFVRHDVSS 63
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
D + ++ + L+ VL+NN GI P L+K+N E
Sbjct: 64 EADWTLVMAAVQRRLGTLN--VLVNNAGILLP--GDMETGRLEDFSRLLKINTESVFIGC 119
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG--I 231
Q + M K G+I+N+ S ++ + Y+ Y+A+KA + +R+ + RK G I
Sbjct: 120 QQGIAAM-KETGGSIINMASVSSWL--PIEQYAGYSASKAAVSALTRAAALSCRKQGYAI 176
Query: 232 DVQCQVPLYVATKMA 246
V P + T M
Sbjct: 177 RVNSIHPDGIYTPMM 191
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 102 bits (255), Expect = 7e-26
Identities = 51/198 (25%), Positives = 93/198 (46%), Gaps = 10/198 (5%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
G A+VTG GIGK+ +L + G N+V+ R ++LK +D +QA T+ ++ V+
Sbjct: 12 GQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTK-QARVIP 70
Query: 113 FSGDL--DEGVERIKEAI--EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEG 168
++ +E V + ++ + L+NN G + + +++ N+ G
Sbjct: 71 IQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFL--SPAEHISSKGWHAVLETNLTG 128
Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
T + +AV +K G+IVNI PL A +A + ++SL +E+
Sbjct: 129 TFYMCKAVYSSWMKEHGGSIVNIIVPTKAGF---PLAVHSGAARAGVYNLTKSLALEWAC 185
Query: 229 SGIDVQCQVPLYVATKMA 246
SGI + C P + ++ A
Sbjct: 186 SGIRINCVAPGVIYSQTA 203
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 100 bits (250), Expect = 2e-25
Identities = 37/201 (18%), Positives = 76/201 (37%), Gaps = 10/201 (4%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKT---GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSV 109
+ ++TG + G G++ A QLA+ G +++ R+ L+ + + + A+ ++
Sbjct: 6 CAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLA 65
Query: 110 VVDFS--GDLDEGVERIKE--AIEGLDVGVLINNVGISYPYAR-FFHEVDQVLLKNLIKV 164
D + + ++E EGL +LINN ++ F + D + N +
Sbjct: 66 AADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWAL 125
Query: 165 NVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYV 224
N+ +T L + + + + + +Y A KA D + L
Sbjct: 126 NLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLAA 185
Query: 225 EYRKSGIDVQCQVPLYVATKM 245
E + V P + M
Sbjct: 186 EEP--SVRVLSYAPGPLDNDM 204
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Score = 99.8 bits (248), Expect = 2e-25
Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 7/191 (3%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
+VTG + GIGK+ A L K G +++ R+ ++VS I+A + V
Sbjct: 4 VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKE 63
Query: 115 GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
D++ ++ +A +D + + + +I +N+ G TQ
Sbjct: 64 ADVEAMMKTAIDAWGTID----VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQ 119
Query: 175 AVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQ 234
A M+K++KG I+NI S ++ + + YAA KA + FS++ E I+V
Sbjct: 120 AATKIMMKKRKGRIINIASVVGLI--GNIGQANYAAAKAGVIGFSKTAAREGASRNINVN 177
Query: 235 CQVPLYVATKM 245
P ++A+ M
Sbjct: 178 VVCPGFIASDM 188
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Score = 99.3 bits (247), Expect = 3e-25
Identities = 45/194 (23%), Positives = 88/194 (45%), Gaps = 16/194 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
L+TG GIG++ AK G LV L++ ++++ A VV+D +
Sbjct: 8 VLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHP-------VVMDVAD 60
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
++ G + LD +++ GI+ F ++ + +++VN+ G+ V
Sbjct: 61 PASVERGFAEALAHLGRLD--GVVHYAGITRD--NFHWKMPLEDWELVLRVNLTGSFLVA 116
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
+A M ++ G+IV S + + + YAA+ A + +R+L +E + GI V
Sbjct: 117 KAASEAMREKNPGSIVLTASRVYL---GNLGQANYAASMAGVVGLTRTLALELGRWGIRV 173
Query: 234 QCQVPLYVATKMAS 247
P ++ T+M +
Sbjct: 174 NTLAPGFIETRMTA 187
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 99 bits (248), Expect = 4e-25
Identities = 48/235 (20%), Positives = 85/235 (36%), Gaps = 50/235 (21%)
Query: 56 ALVTGPTDGIGKSFAFQLAK-TGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
ALVTG GIG + L + ++VL R+ + + +QA+ + + +D
Sbjct: 6 ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDL 65
Query: 115 GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
+ + +++ GLDV L+NN GI++ + + +K N GT V
Sbjct: 66 QSIRALRDFLRKEYGGLDV--LVNNAGIAFK--VADPTPFHIQAEVTMKTNFFGTRDVCT 121
Query: 175 AVLPGMLKRKKGAIVNIGSGAAIV-IPSDPLY---------------------------- 205
+LP + + +G +VN+ S ++ + S
Sbjct: 122 ELLPLI--KPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKK 179
Query: 206 ----------SVYAATKAYIDQFSRSLYVEYRK----SGIDVQCQVPLYVATKMA 246
S Y TK + SR + + I + P +V T MA
Sbjct: 180 GVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMA 234
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Score = 99.4 bits (247), Expect = 4e-25
Identities = 52/220 (23%), Positives = 86/220 (39%), Gaps = 10/220 (4%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
L+TG G+G++ A +LA G L LV + + L+ ++ ++ + V D S
Sbjct: 7 VLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD 66
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
++ V E +D NN GI ++ +N+ G
Sbjct: 67 EAQVEAYVTATTERFGRID--GFFNNAGIEG-KQNPTESFTAAEFDKVVSINLRGVFLGL 123
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
+ VL M ++ G +VN S I S YAA K + +R+ VEY + GI +
Sbjct: 124 EKVLKIMREQGSGMVVNTASVGGIR--GIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRI 181
Query: 234 QCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEP 273
P + T M +S + +AA +I P
Sbjct: 182 NAIAPGAIWTPMV---ENSMKQLDPENPRKAAEEFIQVNP 218
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 99 bits (248), Expect = 5e-25
Identities = 41/190 (21%), Positives = 68/190 (35%), Gaps = 2/190 (1%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
L+TG + GIG A +LA V LK +A A +
Sbjct: 5 VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
D+ + + V + + + + +++ VNV GT ++ QA
Sbjct: 65 DVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQA 124
Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
LP M +R G ++ GS ++ P VY A+K ++ SL V G+ +
Sbjct: 125 FLPDMKRRGSGRVLVTGSVGGLM--GLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSL 182
Query: 236 QVPLYVATKM 245
V T
Sbjct: 183 IECGPVHTAF 192
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Score = 95.5 bits (237), Expect = 1e-23
Identities = 51/193 (26%), Positives = 92/193 (47%), Gaps = 8/193 (4%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
ALVTG + G+G A LA+ G ++V+ RN ++ + + + KY + + D S
Sbjct: 8 ALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDVSN 66
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
++ + +E +KE LD ++N GI+ + E + +I+VN+ GT V
Sbjct: 67 YEEVKKLLEAVKEKFGKLD--TVVNAAGINRRHP--AEEFPLDEFRQVIEVNLFGTYYVC 122
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
+ + + +I+NI + + P S YAA+K + +++L E+ + GI V
Sbjct: 123 REAFSLLRESDNPSIINI-GSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRV 181
Query: 234 QCQVPLYVATKMA 246
P + TKM
Sbjct: 182 NVIAPGWYRTKMT 194
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Score = 93.3 bits (231), Expect = 8e-23
Identities = 43/192 (22%), Positives = 77/192 (40%), Gaps = 9/192 (4%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
LVTG IG + A +LA+ G + L+ N + L+ S++ K + +S V D +
Sbjct: 8 CLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVE--ARSYVCDVTS 65
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
+ V+ + +D ++ + + D ++ +NV G V
Sbjct: 66 EEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDD---FARVLTINVTGAFHVL 122
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
+AV M+ + G IVN S A + P P + Y +K I + + ++ I V
Sbjct: 123 KAVSRQMITQNYGRIVNTASMAGVKGP--PNMAAYGTSKGAIIALTETAALDLAPYNIRV 180
Query: 234 QCQVPLYVATKM 245
P Y+
Sbjct: 181 NAISPGYMGPGF 192
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 92.9 bits (230), Expect = 9e-23
Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 12/196 (6%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKTQIKSVVV 111
G AL TG GIG+ A +L + G ++V+ G + ++V ++ A+ ++
Sbjct: 6 GKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQ--GVAIQA 63
Query: 112 DFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
D S ++ ++ GLD +++N G+ EV Q L + +N G
Sbjct: 64 DISKPSEVVALFDKAVSHFGGLDF--VMSNSGMEVW--CDELEVTQELFDKVFNLNTRGQ 119
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
V Q L ++G + + S A V+ P +++YA +KA ++ F R+ V+
Sbjct: 120 FFVAQQGLKHC---RRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAK 176
Query: 230 GIDVQCQVPLYVATKM 245
G+ V C P V T M
Sbjct: 177 GVTVNCIAPGGVKTDM 192
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Score = 90.9 bits (225), Expect = 5e-22
Identities = 43/191 (22%), Positives = 83/191 (43%), Gaps = 5/191 (2%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
ALVTG + GIG + +LA G + RN +L + + + K + +
Sbjct: 9 ALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRT 68
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
+ D+ ++ + +G +L+NN G+ + + ++ N E ++Q
Sbjct: 69 ERDKLMQTVAHVFDGKL-NILVNNAGVVIHKE--AKDFTEKDYNIIMGTNFEAAYHLSQI 125
Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
P + + G ++ + S A + P S+Y+A+K I+Q ++SL E+ K I V
Sbjct: 126 AYPLLKASQNGNVIFLSSIAGFS--ALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNS 183
Query: 236 QVPLYVATKMA 246
P + T +
Sbjct: 184 VAPGVILTPLV 194
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 87.8 bits (217), Expect = 6e-21
Identities = 47/193 (24%), Positives = 77/193 (39%), Gaps = 13/193 (6%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
ALV+G G+G S + G +V ++ K ++ + + V +D +
Sbjct: 9 ALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADA-----ARYVHLDVTQ 63
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
V+ A GL VL+NN GI + + ++ VN+ G
Sbjct: 64 PAQWKAAVDTAVTAFGGLH--VLVNNAGILNI--GTIEDYALTEWQRILDVNLTGVFLGI 119
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
+AV+ M + +G+I+NI S + Y ATK + ++S +E SGI V
Sbjct: 120 RAVVKPMKEAGRGSIINISSI--EGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRV 177
Query: 234 QCQVPLYVATKMA 246
P V T M
Sbjct: 178 NSIHPGLVKTPMT 190
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Score = 86.2 bits (213), Expect = 2e-20
Identities = 35/191 (18%), Positives = 72/191 (37%), Gaps = 11/191 (5%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
A+VT G A +L++ G + + + ++ +A+T + +
Sbjct: 3 AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL-----EAFAETYPQLKPMSEQ- 56
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
+ E +E + A +D VL++N + + + + ++ + A
Sbjct: 57 EPAELIEAVTSAYGQVD--VLVSNDIFAPEFQP-IDKYAVEDYRGAVEALQIRPFALVNA 113
Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
V M KRK G I+ I S + S Y + +A + +L E + I V
Sbjct: 114 VASQMKKRKSGHIIFITSATPFGPWKE--LSTYTSARAGACTLANALSKELGEYNIPVFA 171
Query: 236 QVPLYVATKMA 246
P Y+ ++ +
Sbjct: 172 IGPNYLHSEDS 182
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 85.9 bits (212), Expect = 4e-20
Identities = 39/196 (19%), Positives = 77/196 (39%), Gaps = 8/196 (4%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-PDKLKDVSDSIQAKYAKTQIKSVVV 111
G ALVTG GIG+ A +L + G +++ N + ++V +I+ + V
Sbjct: 18 GKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANV 77
Query: 112 DFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
D+ E + LD ++ +N G+ +V + +N G
Sbjct: 78 GVVEDIVRMFEEAVKIFGKLD--IVCSNSGVVSFGH--VKDVTPEEFDRVFTINTRGQFF 133
Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
V + + + ++ +G + P ++VY+ +K I+ F+R + ++ I
Sbjct: 134 VAREAYKHLEIGGRLILMGSITG---QAKAVPKHAVYSGSKGAIETFARCMAIDMADKKI 190
Query: 232 DVQCQVPLYVATKMAS 247
V P + T M
Sbjct: 191 TVNVVAPGGIKTDMYH 206
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Score = 85.7 bits (211), Expect = 4e-20
Identities = 42/192 (21%), Positives = 71/192 (36%), Gaps = 7/192 (3%)
Query: 56 ALVTGPTD--GIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDF 113
ALV G T+ +G + A +L + G + L + + +A ++ V
Sbjct: 11 ALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQD 70
Query: 114 SGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
+LD +KEA GLD V + + + ++V+ V
Sbjct: 71 E-ELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVA 129
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
+ P + R+ G IV + A+ + P Y+V A KA ++ R L E G+ V
Sbjct: 130 RRAEPLL--REGGGIVTLTYYASEKVV--PKYNVMAIAKAALEASVRYLAYELGPKGVRV 185
Query: 234 QCQVPLYVATKM 245
V T
Sbjct: 186 NAISAGPVRTVA 197
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Score = 83.3 bits (205), Expect = 3e-19
Identities = 41/192 (21%), Positives = 74/192 (38%), Gaps = 12/192 (6%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
AL+TG GIG++FA + G + + N + + + I ++ +D +
Sbjct: 8 ALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPA-----ACAIALDVTD 62
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
+D V + + +D+ V E+ + L +NV GT +
Sbjct: 63 QASIDRCVAELLDRWGSIDILVNNAA----LFDLAPIVEITRESYDRLFAINVSGTLFMM 118
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
QAV M+ +G + + A VY ATKA + ++S + + GI+V
Sbjct: 119 QAVARAMIAGGRGGKIINMASQAGRRGEAL-VGVYCATKAAVISLTQSAGLNLIRHGINV 177
Query: 234 QCQVPLYVATKM 245
P V +
Sbjct: 178 NAIAPGVVDGEH 189
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Score = 82.2 bits (202), Expect = 9e-19
Identities = 48/194 (24%), Positives = 81/194 (41%), Gaps = 10/194 (5%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP-DKLKDVSDSIQAKYAKTQIKSVVVDFS 114
A+VTG T GIG A LA G ++VL G +++ V + A++ ++ D S
Sbjct: 7 AVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHG-VKVLYDGADLS 65
Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
+ V+ + +D+ V + + F E ++ +N+
Sbjct: 66 KGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWD----AILALNLSAVFHG 121
Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
T A LP M K+ G I+NI S +V ++ S Y A K + F++ +E GI
Sbjct: 122 TAAALPHMKKQGFGRIINIASAHGLVASAN--KSAYVAAKHGVVGFTKVTALETAGQGIT 179
Query: 233 VQCQVPLYVATKMA 246
P +V T +
Sbjct: 180 ANAICPGWVRTPLV 193
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Score = 81.6 bits (201), Expect = 9e-19
Identities = 50/195 (25%), Positives = 76/195 (38%), Gaps = 21/195 (10%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
LV + GIG++ A L++ G + + RN + LK + VV D
Sbjct: 4 DKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGH-----------RYVVCD 52
Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
DLD E++KE V +L+ N P A FF E+ K I K+
Sbjct: 53 LRKDLDLLFEKVKE------VDILVLN--AGGPKAGFFDELTNEDFKEAIDSLFLNMIKI 104
Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
+ LP M ++ G IV I S + I + + + F ++L E GI
Sbjct: 105 VRNYLPAMKEKGWGRIVAITSFSVISPI--ENLYTSNSARMALTGFLKTLSFEVAPYGIT 162
Query: 233 VQCQVPLYVATKMAS 247
V C P + T+
Sbjct: 163 VNCVAPGWTETERVK 177
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 81.3 bits (199), Expect = 1e-18
Identities = 43/207 (20%), Positives = 77/207 (37%), Gaps = 17/207 (8%)
Query: 56 ALVTGPTDGIGKSFA---FQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
L+TG G+G L + +L RN ++ K++ D + ++ I + +
Sbjct: 5 ILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAKNHSNIHILEIDLR 63
Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
D+ V I+ + + VL NN GI+ AR V L + ++ N +
Sbjct: 64 NFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITA-VRSQELLDTLQTNTVVPIML 122
Query: 173 TQAVLPGMLKRKKGAIVNIGSG------------AAIVIPSDPLYSVYAATKAYIDQFSR 220
+A LP + K K +I +D Y +K+ ++ ++
Sbjct: 123 AKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATK 182
Query: 221 SLYVEYRKSGIDVQCQVPLYVATKMAS 247
SL V+ I P +V T M
Sbjct: 183 SLSVDLYPQRIMCVSLHPGWVKTDMGG 209
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Score = 82.1 bits (202), Expect = 2e-18
Identities = 42/215 (19%), Positives = 81/215 (37%), Gaps = 4/215 (1%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
A +TG G+GK L+ G V+ R D LK ++ I ++ ++ ++ D
Sbjct: 28 AFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVRD 86
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
+ V+ + + I + + + K + + + GT VT
Sbjct: 87 --PDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLE 144
Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
+ ++K +KGA + S + A+ KA ++ S+SL E+ K G+
Sbjct: 145 IGKQLIKAQKGAAFLSITTIYAETGSGFVV-PSASAKAGVEAMSKSLAAEWGKYGMRFNV 203
Query: 236 QVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIG 270
P + TK A + ++ R +G
Sbjct: 204 IQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLG 238
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Score = 80.9 bits (199), Expect = 2e-18
Identities = 50/201 (24%), Positives = 85/201 (42%), Gaps = 8/201 (3%)
Query: 47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP-DKLKDVSDSIQAKYAKTQ 105
K+L G ++TG + G+GKS A + A +V+ R+ D+ V + I+ +
Sbjct: 3 KDLE--GKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAI 60
Query: 106 IKSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVN 165
V D+ V+ + LD V+INN G+ P + HE+ +I N
Sbjct: 61 AVKGDVTVESDVINLVQSAIKEFGKLD--VMINNAGLENPVS--SHEMSLSDWNKVIDTN 116
Query: 166 VEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
+ G ++ + ++ V S IP PL+ YAA+K + + +L +E
Sbjct: 117 LTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPW-PLFVHYAASKGGMKLMTETLALE 175
Query: 226 YRKSGIDVQCQVPLYVATKMA 246
Y GI V P + T +
Sbjct: 176 YAPKGIRVNNIGPGAINTPIN 196
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 80.7 bits (198), Expect = 2e-18
Identities = 34/198 (17%), Positives = 66/198 (33%), Gaps = 9/198 (4%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
A++TG G+G + A +L G + VL+ + + +
Sbjct: 8 AVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQ 67
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
+ ++ I +Y + + + + VN+ GT V +
Sbjct: 68 TALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRV-LDVNLMGTFNVIRL 126
Query: 176 VLPGMLKR------KKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
V M + ++G I+N S AA + Y+A+K I + + +
Sbjct: 127 VAGEMGQNEPDQGGQRGVIINTASVAAFE--GQVGQAAYSASKGGIVGMTLPIARDLAPI 184
Query: 230 GIDVQCQVPLYVATKMAS 247
GI V P T + +
Sbjct: 185 GIRVMTIAPGLFGTPLLT 202
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Score = 80.5 bits (198), Expect = 3e-18
Identities = 49/201 (24%), Positives = 80/201 (39%), Gaps = 11/201 (5%)
Query: 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIK 107
NLR G A++TG GIGK A A G ++V+ N D V D IQ +
Sbjct: 6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ--AF 63
Query: 108 SVVVDFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVN 165
+ D + +L + + +D +L+NN G P ++ + ++N
Sbjct: 64 ACRCDITSEQELSALADFAISKLGKVD--ILVNNAGGGGPKP---FDMPMADFRRAYELN 118
Query: 166 VEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
V ++Q V P M K G I+ I S + + YA++KA R++ +
Sbjct: 119 VFSFFHLSQLVAPEMEKNGGGVILTITSM--AAENKNINMTSYASSKAAASHLVRNMAFD 176
Query: 226 YRKSGIDVQCQVPLYVATKMA 246
+ I V P + T
Sbjct: 177 LGEKNIRVNGIAPGAILTDAL 197
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Score = 79.5 bits (195), Expect = 6e-18
Identities = 50/192 (26%), Positives = 77/192 (40%), Gaps = 9/192 (4%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
ALVTG GIGK+ A +L K G + + N K V+ I +V VD S
Sbjct: 4 ALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGH--AVAVKVDVSD 61
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
+ VE+ ++ + G DV V V S P E+ + +NV+G
Sbjct: 62 RDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVD----KVYNINVKGVIWGI 117
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
QA + K G + A +P +VY+++K + +++ + GI V
Sbjct: 118 QAAVEAFKKEGHGGKIINACSQA-GHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITV 176
Query: 234 QCQVPLYVATKM 245
P V T M
Sbjct: 177 NGYCPGIVKTPM 188
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Score = 79.5 bits (195), Expect = 9e-18
Identities = 36/209 (17%), Positives = 67/209 (32%), Gaps = 20/209 (9%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKL-KDVSDSIQAKYAKTQIK-----SV 109
A++TG IG S A +L + G +V+ R+ + + + + A A + + S+
Sbjct: 4 AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSL 63
Query: 110 VVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYP---------YARFFHEVDQVLLKN 160
++ ++ A D VL+NN YP + +
Sbjct: 64 SSSLLDCCEDIIDCSFRAFGRCD--VLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAE 121
Query: 161 LIKVNVEGTTKVTQAVLPGMLKRKKGAI---VNIGSGAAIVIPSDPLYSVYAATKAYIDQ 217
L N + +A + + A+ P + VY K +
Sbjct: 122 LFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGG 181
Query: 218 FSRSLYVEYRKSGIDVQCQVPLYVATKMA 246
+R+ +E I V P A
Sbjct: 182 LTRAAALELAPRHIRVNAVAPGLSLLPPA 210
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 78.3 bits (192), Expect = 1e-17
Identities = 40/202 (19%), Positives = 67/202 (33%), Gaps = 33/202 (16%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK------DVSDSIQAKYAKTQIKSV 109
ALVTG G+G++ A L G +V++ + DV+ + A + +
Sbjct: 4 ALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLIYVEGDVTREEDVRRAVARAQE- 62
Query: 110 VVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
L V VG++ + +++VN+ GT
Sbjct: 63 ------------------EAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGT 104
Query: 170 TKVTQAVLPG------MLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLY 223
V + + ++G IVN S AA + YAA+K + +
Sbjct: 105 FNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE--GQIGQAAYAASKGGVVALTLPAA 162
Query: 224 VEYRKSGIDVQCQVPLYVATKM 245
E GI V P T +
Sbjct: 163 RELAGWGIRVVTVAPGLFDTPL 184
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Score = 78.2 bits (192), Expect = 2e-17
Identities = 41/193 (21%), Positives = 73/193 (37%), Gaps = 16/193 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
LVTG GIG++ A+ G +LV V R L + +++A+ +VV D S
Sbjct: 8 ILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAE-----AIAVVADVSD 62
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
++ E L V S E + +++VN+ G+ V
Sbjct: 63 PKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWE----KVLRVNLTGSFLVA 118
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
+ + + + +G + YAA K + +R+L +E + G+ V
Sbjct: 119 RKAGEVLEEGGSLVLTGSVAGL-----GAFGLAHYAAGKLGVVGLARTLALELARKGVRV 173
Query: 234 QCQVPLYVATKMA 246
+P + T M
Sbjct: 174 NVLLPGLIQTPMT 186
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 75.5 bits (185), Expect = 1e-16
Identities = 45/193 (23%), Positives = 75/193 (38%), Gaps = 21/193 (10%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
LVTG GIG + A +LA G + + R K + V VD +
Sbjct: 10 VLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL-------------FGVEVDVTD 56
Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
+D ++E ++V V F + + + +I N+ G +V
Sbjct: 57 SDAVDRAFTAVEEHQGPVEVLVSNAG----LSADAFLMRMTEEKFEKVINANLTGAFRVA 112
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
Q M + K G ++ IGS + + + YAA+KA + +RS+ E K+ +
Sbjct: 113 QRASRSMQRNKFGRMIFIGSVSGLW--GIGNQANYAASKAGVIGMARSIARELSKANVTA 170
Query: 234 QCQVPLYVATKMA 246
P Y+ T M
Sbjct: 171 NVVAPGYIDTDMT 183
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Score = 75.7 bits (185), Expect = 1e-16
Identities = 35/220 (15%), Positives = 69/220 (31%), Gaps = 13/220 (5%)
Query: 56 ALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDF 113
LVTG I A + + G L +N DKLK + A+ + V
Sbjct: 8 ILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLGSDIVLQCDVAE 66
Query: 114 SGDLDEGVERIKEAIEGLDVGVLINNVGISYPYA---RFFHEVDQVLLKNLIKVNVEGTT 170
+D + + D ++++G + + + V + K ++
Sbjct: 67 DASIDTMFAELGKVWPKFDG--FVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFV 124
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
+ +A + A++ + A + P Y+V KA ++ R + G
Sbjct: 125 AMAKACRSMLNPGS--ALLTLSYLGAER--AIPNYNVMGLAKASLEANVRYMANAMGPEG 180
Query: 231 IDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIG 270
+ V + T + F A +R
Sbjct: 181 VRVNAISAGPIRTLA-ASGIKDFRKMLAHCEAVTPIRRTV 219
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 74.1 bits (181), Expect = 4e-16
Identities = 26/192 (13%), Positives = 62/192 (32%), Gaps = 17/192 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
+V G +G + K G ++ + + + D + + +++
Sbjct: 5 VIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGN----------KNWTE 54
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
+E+ +++G V + + + +IK +V + +
Sbjct: 55 QEQSILEQTASSLQGSQVDGVFCVA-GGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKL 113
Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID--V 233
+ G + G+ AA+ P Y KA + + SL + + V
Sbjct: 114 --ATTHLKPGGLLQLTGAAAAMG--PTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAV 169
Query: 234 QCQVPLYVATKM 245
+P+ + T M
Sbjct: 170 LTIMPVTLDTPM 181
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 72.9 bits (178), Expect = 1e-15
Identities = 25/192 (13%), Positives = 58/192 (30%), Gaps = 17/192 (8%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
LV G +G + + ++ S ++ + T+
Sbjct: 5 VLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTE---------- 54
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
D+ + + + V ++ + + + K ++ +T +
Sbjct: 55 QADQVTAEVGKLLGDQKVDAILCVA-GGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHL 113
Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR--KSGIDV 233
++ G + G+ AA + P Y K + Q +SL + SG
Sbjct: 114 A--TKHLKEGGLLTLAGAKAA--LDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAA 169
Query: 234 QCQVPLYVATKM 245
+P+ + T M
Sbjct: 170 IAVLPVTLDTPM 181
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 71.1 bits (173), Expect = 6e-15
Identities = 31/194 (15%), Positives = 64/194 (32%), Gaps = 7/194 (3%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKL-KDVSDSIQAKYAKTQIKSVVVDFS 114
+++G GIG + L G +V + ++ D+S + K A I V+ S
Sbjct: 4 IVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIADLSTAEGRKQA---IADVLAKCS 60
Query: 115 GDLDEGVER--IKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
+D V + + L V +N G + F + + + ++ + +
Sbjct: 61 KGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHL 120
Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
P L + G + YA +K + R + ++G+
Sbjct: 121 AFDKNPLALALEAGEEAKARAIVEHAGEQ-GGNLAYAGSKNALTVAVRKRAAAWGEAGVR 179
Query: 233 VQCQVPLYVATKMA 246
+ P T +
Sbjct: 180 LNTIAPGATETPLL 193
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Score = 57.2 bits (137), Expect = 2e-10
Identities = 33/193 (17%), Positives = 56/193 (29%), Gaps = 20/193 (10%)
Query: 40 VNFLRPAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQA 99
V + A G A+V T +G A LA G +VL GR DK + +DS+
Sbjct: 10 VALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNK 69
Query: 100 KYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK 159
++ + D EA++G + I + Q +
Sbjct: 70 RFKVNVTAAETADD--------ASRAEAVKGAH--FVFTAGAIG------LELLPQAAWQ 113
Query: 160 NLIKVNV-EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQF 218
N + + + G+ KG + +A I +
Sbjct: 114 NESSIEIVADYNAQPPLGIGGIDATDKGKEYGGKRAFGALGIGG---LKLKLHRACIAKL 170
Query: 219 SRSLYVEYRKSGI 231
S + I
Sbjct: 171 FESSEGVFDAEEI 183
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Score = 50.5 bits (119), Expect = 8e-08
Identities = 26/193 (13%), Positives = 56/193 (29%), Gaps = 7/193 (3%)
Query: 56 ALVTGPTD--GIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDF 113
L+ G + I A G L N + L+ I + + + V
Sbjct: 8 GLIVGVANNKSIAYGIAQSCFNQGATLAFTYLN-ESLEKRVRPIAQELNSPYVYELDVSK 66
Query: 114 SGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
+K+ + LD V ++V + A ++ + + + +
Sbjct: 67 EEHFKSLYNSVKKDLGSLDFIV--HSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIE 124
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
L +++ + + + KA ++ R L V+ K I V
Sbjct: 125 LTNTLKPLLNNGASVLTLSYLGSTKYMAHYNV--MGLAKAALESAVRYLAVDLGKHHIRV 182
Query: 234 QCQVPLYVATKMA 246
+ T +
Sbjct: 183 NALSAGPIRTLAS 195
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Score = 50.4 bits (119), Expect = 8e-08
Identities = 39/213 (18%), Positives = 60/213 (28%), Gaps = 33/213 (15%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQI-------- 106
ALVTG +G+S A L G + L R+ + +S ++ A+ + I
Sbjct: 5 ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 64
Query: 107 ----------KSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARF------- 149
S V E V DV V + P R
Sbjct: 65 VATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEP 124
Query: 150 ---FHEVDQVLLKNLIKVNVEG----TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD 202
E + +L N V K + I A+
Sbjct: 125 CVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL 184
Query: 203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
Y++Y K ++ +RS +E I V
Sbjct: 185 LGYTIYTMAKGALEGLTRSAALELAPLQIRVNG 217
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 48.5 bits (114), Expect = 3e-07
Identities = 32/191 (16%), Positives = 60/191 (31%), Gaps = 13/191 (6%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
LVTG T G+G A LA+ G +L+LV R+ + + A +V
Sbjct: 12 VLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDV 71
Query: 115 GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
D + E + + + + + + + ++ + V G + +
Sbjct: 72 TDRESVRELLGGIGDDVPLSAVFHAAATLDDG--TVDTLTGERIERASRAKVLGARNLHE 129
Query: 175 AVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQ 234
+ A V S A+ P YA AY+D ++ + +
Sbjct: 130 ----LTRELDLTAFVLFSSFASAF--GAPGLGGYAPGNAYLDGLAQQRRSDG----LPAT 179
Query: 235 CQVPLYVATKM 245
A
Sbjct: 180 AVAWGTWAGSG 190
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 47.4 bits (111), Expect = 5e-07
Identities = 23/191 (12%), Positives = 52/191 (27%), Gaps = 7/191 (3%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
AL+ G T +GK A +LA G +V+ R +K + + + I + + +
Sbjct: 4 ALLGG-TGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAA 62
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
+ + +D + I V + E + A
Sbjct: 63 EACDIAVLTIPWEHAID--TARDLKNILREKIVVSPLVPVSRGAKGFTYSSERSAAEIVA 120
Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
+ K + A + + D S+ + + ++
Sbjct: 121 EVLESEKVVSALHTIPAARFA----NLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRP 176
Query: 236 QVPLYVATKMA 246
++
Sbjct: 177 LDAGPLSNSRL 187
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Score = 40.9 bits (94), Expect = 1e-04
Identities = 11/39 (28%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Query: 56 ALVTGP--TDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD 92
LV+G I A + G LVL G + +L
Sbjct: 9 ILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQ 47
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Score = 41.0 bits (94), Expect = 1e-04
Identities = 20/227 (8%), Positives = 64/227 (28%), Gaps = 40/227 (17%)
Query: 56 ALVTGP--TDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVV--- 110
+ G T+G G A +L+K + ++ P + + K+ I
Sbjct: 5 CFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKM 64
Query: 111 -----------------------------VDFSGDLDEGVERIKEAIEGLDVGVLINNVG 141
+ + +++ I + +++ ++++
Sbjct: 65 NILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINML--VHSLA 122
Query: 142 ISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS 201
+ + + + + + + + + M + + A
Sbjct: 123 NAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTY---HASQKVV 179
Query: 202 DPLYSVYAATKAYIDQFSRSLYVEY-RKSGIDVQCQVPLYVATKMAS 247
++ KA ++ +R L R I + + ++ A+
Sbjct: 180 PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAAT 226
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Score = 40.1 bits (92), Expect = 2e-04
Identities = 11/56 (19%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Query: 53 GSWALVTG--PTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQI 106
G A + G +G G + A LA G +++ P + + K+ ++++
Sbjct: 8 GKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRV 63
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.0 bits (92), Expect = 3e-04
Identities = 32/180 (17%), Positives = 49/180 (27%), Gaps = 17/180 (9%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
AL+TG T G A L + G + + R K + I+ + G
Sbjct: 4 ALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYG 63
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
DL + +K E + + E V+ GT ++ A
Sbjct: 64 DLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYT-------ADVDGVGTLRLLDA 116
Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIP-------SDPLY--SVYAATKAYIDQFSRSLYVEY 226
V L + + P Y S Y A K Y + Y
Sbjct: 117 VKTCGLINSV-KFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY 175
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 39.4 bits (91), Expect = 4e-04
Identities = 36/185 (19%), Positives = 62/185 (33%), Gaps = 28/185 (15%)
Query: 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-----NPDKLKDVSDSIQAKYAKTQIKSVV 110
AL+TG T G A L + G + + R N +++ + K +
Sbjct: 4 ALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHL---- 59
Query: 111 VDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
GDL + + + + + N +S+ F V+ GT
Sbjct: 60 --HYGDLSD-TSNLTRILREVQPDEVYNLGAMSHVAVSFESPEY------TADVDAMGTL 110
Query: 171 KVTQAVLPGMLKRKKGAIVNIGS----GAAIVIP---SDPLY--SVYAATKAYIDQFSRS 221
++ +A+ L+ KK + G IP + P Y S YA K Y + +
Sbjct: 111 RLLEAIRFLGLE-KKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVN 169
Query: 222 LYVEY 226
Y
Sbjct: 170 YRESY 174
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Score = 37.5 bits (85), Expect = 0.002
Identities = 18/60 (30%), Positives = 25/60 (41%)
Query: 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
GS LVTG + QL + G + R+ KL ++ AKY +VV D
Sbjct: 11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVED 70
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 320 | |||
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 100.0 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 100.0 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 100.0 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 100.0 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 100.0 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 100.0 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 100.0 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 100.0 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 100.0 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 100.0 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 100.0 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 100.0 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 100.0 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 100.0 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 100.0 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 100.0 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 100.0 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 100.0 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 100.0 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 100.0 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 100.0 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 100.0 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 100.0 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 100.0 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 100.0 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 100.0 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 100.0 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 100.0 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 100.0 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 100.0 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 100.0 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 100.0 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 100.0 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 100.0 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 100.0 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 100.0 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 100.0 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 100.0 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 100.0 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 100.0 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 100.0 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 100.0 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 100.0 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 100.0 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 100.0 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 100.0 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 100.0 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 100.0 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 100.0 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 100.0 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 100.0 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 100.0 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 100.0 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 100.0 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 100.0 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 100.0 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 100.0 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 100.0 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 100.0 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 100.0 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 100.0 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 100.0 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 100.0 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.97 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 99.96 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 99.8 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.72 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.66 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.63 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.61 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.61 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.6 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.54 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.53 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.52 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.51 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.51 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.5 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.5 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.5 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.48 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.48 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.44 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.4 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.4 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.37 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.36 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.35 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.33 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.2 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.06 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 98.98 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 98.94 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 98.88 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 98.85 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 98.8 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 98.76 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 98.19 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 98.15 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 98.1 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 98.1 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 98.01 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 97.97 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 97.84 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 97.8 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 97.77 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.72 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 97.71 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 97.71 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 97.66 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 97.65 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 97.58 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 97.49 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 97.46 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 97.45 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 97.42 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 97.35 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 97.27 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 97.25 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 97.17 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 97.16 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.14 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 97.14 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 97.13 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 97.13 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 97.07 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 97.04 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 97.03 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 97.03 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 96.94 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 96.92 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 96.85 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 96.85 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 96.82 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 96.82 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 96.79 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 96.79 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 96.79 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 96.78 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 96.78 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 96.73 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 96.7 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 96.66 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 96.65 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 96.65 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 96.57 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 96.57 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 96.57 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 96.55 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 96.47 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 96.47 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 96.45 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 96.44 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 96.41 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 96.39 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 96.25 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 96.23 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 96.19 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 96.19 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 96.17 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 96.17 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 96.06 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 96.06 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 96.06 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 95.94 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 95.92 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 95.72 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 95.64 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 95.63 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 95.57 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 95.54 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 95.51 | |
| d1p9oa_ | 290 | Phosphopantothenoylcysteine synthetase {Human (Hom | 95.29 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 95.26 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 95.2 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 95.15 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 95.08 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 95.07 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 94.95 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 94.81 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 94.64 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 94.56 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 94.1 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 93.84 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 93.58 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 93.58 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 93.55 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 93.51 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 93.5 | |
| d2fyta1 | 311 | Protein arginine N-methyltransferase 3, PRMT3 {Hum | 93.46 | |
| d1m6ya2 | 192 | TM0872, methyltransferase domain {Thermotoga marit | 92.89 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 92.81 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 92.78 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 92.76 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 92.75 | |
| d1ve3a1 | 226 | Hypothetical protein PH0226 {Archaeon Pyrococcus h | 92.62 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 92.55 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 92.35 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 91.99 | |
| d1u0sy_ | 118 | CheY protein {Thermotoga maritima [TaxId: 2336]} | 91.98 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 91.94 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 91.82 | |
| d2as0a2 | 324 | Hypothetical protein PH1915, middle and C-terminal | 91.74 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 91.66 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 91.52 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 91.48 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 91.45 | |
| d1wy7a1 | 201 | Hypothetical protein PH1948 {Archaeon Pyrococcus h | 91.42 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 91.37 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 91.35 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 91.34 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 91.27 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 91.25 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 91.18 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 91.03 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 90.98 | |
| d1oria_ | 316 | Protein arginine N-methyltransferase 1, PRMT1 {Rat | 90.78 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 90.74 | |
| d1y8ca_ | 246 | Putative methyltransferase CAC2371 {Clostridium ac | 90.73 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 90.59 | |
| d1wxxa2 | 318 | Hypothetical protein TTHA1280, middle and C-termin | 90.54 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 90.45 | |
| d1dusa_ | 194 | Hypothetical protein MJ0882 {Archaeon Methanococcu | 90.3 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 90.11 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 90.11 | |
| d2nxca1 | 254 | PrmA-like protein TTHA0656 (TT0836) {Thermus therm | 90.06 | |
| d1dl5a1 | 213 | Protein-L-isoaspartyl O-methyltransferase {Thermot | 89.93 | |
| d2igta1 | 309 | Putative methyltransferase Atu0340 {Agrobacterium | 89.91 | |
| d1jg1a_ | 215 | Protein-L-isoaspartyl O-methyltransferase {Archaeo | 89.42 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 89.41 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 89.34 | |
| d1s6ya1 | 169 | 6-phospho-beta-glucosidase {Bacillus stearothermop | 89.12 | |
| d1g6q1_ | 328 | Arginine methyltransferase, HMT1 {Baker's yeast (S | 89.04 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 89.03 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 88.74 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 88.73 | |
| d1yb2a1 | 250 | Hypothetical protein Ta0852 {Thermoplasma acidophi | 88.68 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 88.48 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 88.37 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 88.35 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 88.28 | |
| d1ne2a_ | 197 | Hypothetical protein Ta1320 {Archaeon Thermoplasma | 88.01 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 87.73 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 87.68 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 87.64 | |
| d1vl5a_ | 231 | Hypothetical protein BH2331 {Bacillus halodurans [ | 87.6 | |
| d1wzna1 | 251 | Hypothetical methyltransferase PH1305 {Archaeon Py | 87.56 | |
| d1ws6a1 | 171 | Methyltransferase TTHA0928 {Thermus thermophilus [ | 87.1 | |
| d2b78a2 | 317 | Hypothetical protein SMu776, middle and C-terminal | 86.66 | |
| d1l3ia_ | 186 | Precorrin-6Y methyltransferase (CbiT) {Archaeon Me | 86.53 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 86.37 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 86.32 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 86.27 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 86.13 | |
| d1ihua2 | 279 | Arsenite-translocating ATPase ArsA {Escherichia co | 86.05 | |
| d1i1na_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Human ( | 85.94 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 85.89 | |
| d1g3qa_ | 237 | Cell division regulator MinD {Archaeon Pyrococcus | 85.84 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 85.81 | |
| d1nv8a_ | 271 | N5-glutamine methyltransferase, HemK {Thermotoga m | 85.75 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 85.45 | |
| d1im8a_ | 225 | Hypothetical protein HI0319 (YecO) {Haemophilus in | 85.38 | |
| d2o57a1 | 282 | Putative sarcosine dimethylglycine methyltransfera | 85.35 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 85.28 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 84.98 | |
| d2cl5a1 | 214 | Catechol O-methyltransferase, COMT {Rat (Rattus no | 84.73 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 84.4 | |
| d2fhpa1 | 182 | Putative methylase EF2452 {Enterococcus faecalis [ | 84.29 | |
| d2i6ga1 | 198 | Putative methyltransferase TehB {Salmonella typhim | 83.7 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 83.69 | |
| d2esra1 | 152 | Putative methyltransferase SPy1538 {Streptococcus | 83.65 | |
| d2csua3 | 163 | Acetate-CoA ligase alpha chain, AcdA, domains 2 an | 82.99 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 82.85 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 82.51 | |
| d2b3ta1 | 274 | N5-glutamine methyltransferase, HemK {Escherichia | 82.42 | |
| d1inla_ | 295 | Spermidine synthase {Thermotoga maritima [TaxId: 2 | 82.37 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 82.23 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 82.16 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 82.04 | |
| d1vbfa_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Sulfolo | 81.92 | |
| d1xj5a_ | 290 | Spermidine synthase {Thale cress (Arabidopsis thal | 81.86 | |
| d1nkva_ | 245 | Hypothetical Protein YjhP {Escherichia coli [TaxId | 81.63 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 81.53 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 80.88 | |
| d2h00a1 | 250 | Methyltransferase 10 domain containing protein MET | 80.53 | |
| d1mjfa_ | 276 | Putative spermidine synthetase PF0127 (SpeE) {Arch | 80.43 | |
| d1xxla_ | 234 | Hypothetical protein YcgJ {Bacillus subtilis [TaxI | 80.29 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 80.24 |
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=100.00 E-value=4.1e-48 Score=340.00 Aligned_cols=235 Identities=22% Similarity=0.216 Sum_probs=210.9
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+++.++..+++|++|. +++.++++.++
T Consensus 1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~ 80 (258)
T d1iy8a_ 1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER 80 (258)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence 3679999999999999999999999999999999999999999999998888788899999999984 46777888888
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
++++| +||||||+..+ ..++++.+.++|++++++|+.|+++++|+++|+|+++++|+||++||.++.. +.|+.++
T Consensus 81 ~G~iD--iLVnnAG~~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~--~~~~~~~ 155 (258)
T d1iy8a_ 81 FGRID--GFFNNAGIEGK-QNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIR--GIGNQSG 155 (258)
T ss_dssp HSCCS--EEEECCCCCCC-CBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS--BCSSBHH
T ss_pred hCCCC--EEEECCccccc-CCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhcc--CCCCchH
Confidence 88655 99999998654 3678899999999999999999999999999999999999999999999988 7899999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHH
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGV 287 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l 287 (320)
|++||+|+.+|+++|+.|++++|||||+|+||+++|||............+++..+.+...++.+|...|++++.++.||
T Consensus 156 Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fL 235 (258)
T d1iy8a_ 156 YAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFL 235 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999764322222346788888888888888999999999998888
Q ss_pred Hh
Q 020854 288 LS 289 (320)
Q Consensus 288 ~~ 289 (320)
++
T Consensus 236 ~S 237 (258)
T d1iy8a_ 236 LS 237 (258)
T ss_dssp TS
T ss_pred hC
Confidence 75
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=1.9e-46 Score=328.00 Aligned_cols=229 Identities=25% Similarity=0.296 Sum_probs=202.3
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+ +.++..+++|++|. +++.++++.+
T Consensus 1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~ 79 (251)
T d1vl8a_ 1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDVSNYEEVKKLLEAVKE 79 (251)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh-CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 35789999999999999999999999999999999999999999999987765 45788999999984 3677788888
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
+++++ |+||||||+... .++.+.+.++|++++++|+.|+++++|.++|+|++++.|+||+++|..+... +.++..
T Consensus 80 ~~g~i--DiLVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~-~~~~~~ 154 (251)
T d1vl8a_ 80 KFGKL--DTVVNAAGINRR--HPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV-TMPNIS 154 (251)
T ss_dssp HHSCC--CEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC-CSSSCH
T ss_pred HcCCC--CEEEECCCCCCC--CChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccc-cCcccc
Confidence 88864 599999998654 7899999999999999999999999999999999999999999999876542 567889
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHH
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWG 286 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~ 286 (320)
+|++||+|+.+|+++|+.|++++|||||+|+||+++|+|.... ...++..+.+.+.++.+|...|++++.++.|
T Consensus 155 ~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~------~~~~~~~~~~~~~~pl~R~~~pedvA~~v~f 228 (251)
T d1vl8a_ 155 AYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAV------FSDPEKLDYMLKRIPLGRTGVPEDLKGVAVF 228 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHH------HTCHHHHHHHHHTCTTSSCBCGGGGHHHHHH
T ss_pred chHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhc------cCCHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998742 1223456677788888899999999999999
Q ss_pred HHh
Q 020854 287 VLS 289 (320)
Q Consensus 287 l~~ 289 (320)
|++
T Consensus 229 L~S 231 (251)
T d1vl8a_ 229 LAS 231 (251)
T ss_dssp HHS
T ss_pred HhC
Confidence 875
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=100.00 E-value=1.4e-46 Score=330.84 Aligned_cols=233 Identities=22% Similarity=0.280 Sum_probs=210.1
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||++|||||++|||+++|++|+++|++|++++|++++++++.+++++. +.++..+.+|++|+ +++.++++.++
T Consensus 2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (260)
T d1zema1 2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVCDVTSEEAVIGTVDSVVRD 79 (260)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 367999999999999999999999999999999999999999999999775 45688999999984 36777888888
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
++++| +||||||...+ ..++.+.+.++|++++++|+.++++++++++|+|.+++.|+||++||.++.. +.|+.++
T Consensus 80 ~g~iD--ilVnnaG~~~~-~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~--~~~~~~~ 154 (260)
T d1zema1 80 FGKID--FLFNNAGYQGA-FAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVK--GPPNMAA 154 (260)
T ss_dssp HSCCC--EEEECCCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHS--CCTTBHH
T ss_pred hCCCC--eehhhhccccc-cCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhcc--CCcchHH
Confidence 88654 99999998654 3679999999999999999999999999999999999999999999999998 7899999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc--------ccCCCCCCCHHHHHHHHHHHhCCCCcccCCc
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI--------KRSSFFVPSTDVYARAAMRWIGYEPCCTPYW 279 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~--------~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~ 279 (320)
|++||+|+.+|+++|+.|++++|||||+|+||+|+|+|... .........++++++.+...++.+|...|++
T Consensus 155 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~ped 234 (260)
T d1zema1 155 YGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINE 234 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGG
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCHHH
Confidence 99999999999999999999999999999999999998642 1223345789999999999999999999999
Q ss_pred hHHHHHHHHh
Q 020854 280 PHSFIWGVLS 289 (320)
Q Consensus 280 ~~~~~~~l~~ 289 (320)
++.++.||++
T Consensus 235 vA~~v~fL~S 244 (260)
T d1zema1 235 IPGVVAFLLG 244 (260)
T ss_dssp SHHHHHHHHS
T ss_pred HHHHHHHHhC
Confidence 9999999876
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.6e-46 Score=329.28 Aligned_cols=227 Identities=24% Similarity=0.261 Sum_probs=202.8
Q ss_pred cccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHH
Q 020854 47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERI 124 (320)
Q Consensus 47 ~~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~ 124 (320)
.+++++||++||||||+|||+++|++|+++|++|++++|++++++++.+++++. +.++..+++|++|+ +++.++++
T Consensus 5 d~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~--g~~~~~~~~Dvs~~~~~~~~~~~~ 82 (255)
T d1fmca_ 5 DNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFA 82 (255)
T ss_dssp GGGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHHHHH
Confidence 467899999999999999999999999999999999999999999999999876 45688899999984 36777888
Q ss_pred HHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCC
Q 020854 125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL 204 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~ 204 (320)
.+++++ +|+||||||+..+ .++ +.+.++|++++++|+.|+++++|.++|+|.++++|+||++||.++.. +.++
T Consensus 83 ~~~~g~--iDilvnnAG~~~~--~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~--~~~~ 155 (255)
T d1fmca_ 83 ISKLGK--VDILVNNAGGGGP--KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN--KNIN 155 (255)
T ss_dssp HHHHSS--CCEEEECCCCCCC--CCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC--CCTT
T ss_pred HHHcCC--CCEeeeCCcCCCC--Ccc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhc--cccc
Confidence 888886 4599999998764 455 78999999999999999999999999999999999999999999998 7899
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHH
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFI 284 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~ 284 (320)
.++|++||+|+.+|+++|+.|++++|||||+|+||+|+|++.... .+ ++..+.+.+.++.+|...|++++.++
T Consensus 156 ~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~------~~-~e~~~~~~~~~pl~R~g~pedvA~~v 228 (255)
T d1fmca_ 156 MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV------IT-PEIEQKMLQHTPIRRLGQPQDIANAA 228 (255)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT------CC-HHHHHHHHHTCSSCSCBCHHHHHHHH
T ss_pred cccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhcc------CC-HHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 999999999999999999999999999999999999999997641 23 45566677888888999999999998
Q ss_pred HHHHh
Q 020854 285 WGVLS 289 (320)
Q Consensus 285 ~~l~~ 289 (320)
.||++
T Consensus 229 ~fL~S 233 (255)
T d1fmca_ 229 LFLCS 233 (255)
T ss_dssp HHHHS
T ss_pred HHHhC
Confidence 88875
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=1.7e-46 Score=328.39 Aligned_cols=226 Identities=23% Similarity=0.289 Sum_probs=199.4
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
.+.+.||++||||||+|||+++|++|+++|++|++++|++++++++.+++++. +.++..+++|++|. +++.++++.
T Consensus 5 ~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~ 82 (251)
T d2c07a1 5 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGDVSKKEEISEVINKIL 82 (251)
T ss_dssp CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999999999999999999775 45688999999984 366777777
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCc
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
+++++ +|+||||||.... .++.+.+.++|++++++|+.++++++|+++|+|++++.|+||++||.++.. +.++.
T Consensus 83 ~~~g~--iDilvnnag~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~--~~~~~ 156 (251)
T d2c07a1 83 TEHKN--VDILVNNAGITRD--NLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLT--GNVGQ 156 (251)
T ss_dssp HHCSC--CCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH--CCTTC
T ss_pred HhcCC--ceeeeeccccccc--cccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcC--CCCCC
Confidence 77776 4599999998765 678899999999999999999999999999999999999999999999998 78899
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHH
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIW 285 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~ 285 (320)
++|++||+|+.+|+++|+.|++++|||||+|+||+|+|+|... .+++..+.+...++.+|...|++++.++.
T Consensus 157 ~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~--------~~~~~~~~~~~~~pl~R~~~pedvA~~v~ 228 (251)
T d2c07a1 157 ANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK--------ISEQIKKNIISNIPAGRMGTPEEVANLAC 228 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-------------CCHHHHHHHHTTCTTSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccc--------cCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999874 24566777788888889999999999888
Q ss_pred HHHh
Q 020854 286 GVLS 289 (320)
Q Consensus 286 ~l~~ 289 (320)
||++
T Consensus 229 fL~S 232 (251)
T d2c07a1 229 FLSS 232 (251)
T ss_dssp HHHS
T ss_pred HHhC
Confidence 8875
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-46 Score=327.51 Aligned_cols=226 Identities=26% Similarity=0.342 Sum_probs=196.8
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
++.||+++|||||+|||+++|++|+++|++|++++|+.++++++.+++.+. +.+++.+.||++|. +++.++.+.++
T Consensus 4 ~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i~~~ 81 (244)
T d1yb1a_ 4 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVVDCSNREDIYSSAKKVKAE 81 (244)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 466999999999999999999999999999999999999999999999875 45789999999985 35677777777
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
++. +|++|||||.... .++.+.+.+.|++++++|+.|++++++.++|.|.++++|+||++||.++.. +.|++++
T Consensus 82 ~g~--idilinnag~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~--~~~~~~~ 155 (244)
T d1yb1a_ 82 IGD--VSILVNNAGVVYT--SDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV--SVPFLLA 155 (244)
T ss_dssp TCC--CSEEEECCCCCCC--CCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CC--CHHHHHH
T ss_pred cCC--CceeEeecccccc--ccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcC--CCCCcHH
Confidence 776 4599999999875 667889999999999999999999999999999999999999999999998 7899999
Q ss_pred hHHHHHHHHHHHHHHHHHHcc---CCceEEEEeccceecCCCccc-cCCCCCCCHHHHHHHHHHHhCCC-Cc-ccCCchH
Q 020854 208 YAATKAYIDQFSRSLYVEYRK---SGIDVQCQVPLYVATKMASIK-RSSFFVPSTDVYARAAMRWIGYE-PC-CTPYWPH 281 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~---~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~a~~i~~~l~~~-~~-~~~~~~~ 281 (320)
|++||+|+.+|+++|+.|+++ +||+|++|+||+|+|+|.+.. .+.....+||++|+.++..+..+ +. ..|....
T Consensus 156 Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~~~~~~~~~pe~va~~i~~~~~~~~~~i~~p~~~~ 235 (244)
T d1yb1a_ 156 YCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPSTSLGPTLEPEEVVNRLMHGILTEQKMIFIPSSIA 235 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTHHHHCCCCCHHHHHHHHHHHHHTTCSEEEECCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcCccccCCCCHHHHHHHHHHHHhcCCcEEEehHHHH
Confidence 999999999999999999976 589999999999999998752 22245679999999999988776 33 3455554
Q ss_pred HH
Q 020854 282 SF 283 (320)
Q Consensus 282 ~~ 283 (320)
.+
T Consensus 236 ~l 237 (244)
T d1yb1a_ 236 FL 237 (244)
T ss_dssp HH
T ss_pred HH
Confidence 33
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.2e-46 Score=327.68 Aligned_cols=221 Identities=24% Similarity=0.340 Sum_probs=195.0
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||+++|||||+|||+++|++|+++|++|++++|++++++++.+++ +.+...+.+|++|. +++.++++.++
T Consensus 1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 75 (243)
T d1q7ba_ 1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL-----GANGKGLMLNVTDPASIESVLEKIRAE 75 (243)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCCCcEEEEEecCHHHhhhhhhhhhcc
Confidence 367999999999999999999999999999999999999999988887 34577889999984 36777888888
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
+++ +|+||||||.... .++.+.+.++|++++++|+.|+++++|.++|+|++++.|+||++||.++.. +.++.++
T Consensus 76 ~g~--iDilVnnAg~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~--~~~~~~~ 149 (243)
T d1q7ba_ 76 FGE--VDILVNNAGITRD--NLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTM--GNGGQAN 149 (243)
T ss_dssp TCS--CSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH--CCTTCHH
T ss_pred cCC--cceehhhhhhccc--cccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcC--CCCCCHH
Confidence 876 4599999998765 778999999999999999999999999999999999899999999999998 7889999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHH
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGV 287 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l 287 (320)
|++||+|+.+|+++|+.|++++|||||+|+||+++|+|.+. .. ++..+.+...++.+|...|++++.++.||
T Consensus 150 Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~-------~~-~~~~~~~~~~~pl~R~~~pedvA~~v~fL 221 (243)
T d1q7ba_ 150 YAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRA-------LS-DDQRAGILAQVPAGRLGGAQEIANAVAFL 221 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-------SC-HHHHHHHHTTCTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhh-------hh-hhHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999764 12 23345566667777888888888888887
Q ss_pred Hh
Q 020854 288 LS 289 (320)
Q Consensus 288 ~~ 289 (320)
++
T Consensus 222 ~S 223 (243)
T d1q7ba_ 222 AS 223 (243)
T ss_dssp HS
T ss_pred hC
Confidence 65
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=100.00 E-value=3.1e-46 Score=328.70 Aligned_cols=232 Identities=24% Similarity=0.259 Sum_probs=193.2
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCC-HHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-PDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
++||++||||||+|||+++|++|+++|++|++++|+ .+.+++..+++.+.+ +.++.++++|++|. +++.++++.++
T Consensus 2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (260)
T d1x1ta1 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH-GVKVLYDGADLSKGEAVRGLVDNAVRQ 80 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH-TSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 579999999999999999999999999999999997 567888888887665 56789999999984 46777888888
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
++++| +||||||.... .++++.+.++|++++++|+.|+++++|.++|+|++++.|+||++||.++.. +.|+.++
T Consensus 81 ~G~iD--iLVnnAG~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~--~~~~~~~ 154 (260)
T d1x1ta1 81 MGRID--ILVNNAGIQHT--ALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLV--ASANKSA 154 (260)
T ss_dssp HSCCS--EEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CCTTCHH
T ss_pred hCCCc--EEEeecccccC--CchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeeccccccee--ccCCcch
Confidence 88655 99999998765 789999999999999999999999999999999999999999999999998 7899999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCC----CCCCCHHHHHHHHHHHhCCCCcccCCchHHH
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSS----FFVPSTDVYARAAMRWIGYEPCCTPYWPHSF 283 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~----~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~ 283 (320)
|++||+|+.+|+++|+.|++++||+||+|+||+|+|||....... ......+...+.+.+.++.+|...|++++.+
T Consensus 155 Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~ 234 (260)
T d1x1ta1 155 YVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGT 234 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHH
T ss_pred hhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 999999999999999999999999999999999999998742111 1112233344456777888899999999999
Q ss_pred HHHHHh
Q 020854 284 IWGVLS 289 (320)
Q Consensus 284 ~~~l~~ 289 (320)
+.||++
T Consensus 235 v~fL~S 240 (260)
T d1x1ta1 235 AVFLAS 240 (260)
T ss_dssp HHHHHS
T ss_pred HHHHhC
Confidence 988875
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=3e-46 Score=328.24 Aligned_cols=229 Identities=24% Similarity=0.268 Sum_probs=172.6
Q ss_pred cccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHH
Q 020854 47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERI 124 (320)
Q Consensus 47 ~~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~ 124 (320)
+.++++||++||||||+|||+++|++|+++|++|++++|+++++++..+++.+. +.++..+.+|+++. +++.++++
T Consensus 2 ~~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~ 79 (259)
T d1xq1a_ 2 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGSVCDASLRPEREKLMQTV 79 (259)
T ss_dssp CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHHH
Confidence 357788999999999999999999999999999999999999999999999775 45789999999974 35666777
Q ss_pred HHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCC
Q 020854 125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL 204 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~ 204 (320)
.+++++ ++|+||||||...+ .++.+.+.++|++++++|+.|+++++|.++|+|++++.|+||++||.++.. +.++
T Consensus 80 ~~~~~g-~idilvnnAG~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~--~~~~ 154 (259)
T d1xq1a_ 80 SSMFGG-KLDILINNLGAIRS--KPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVV--SASV 154 (259)
T ss_dssp HHHHTT-CCSEEEEECCC--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC------------
T ss_pred HHHhCC-CcccccccccccCC--CchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccc--cccc
Confidence 777743 36699999998765 778999999999999999999999999999999999999999999999988 7788
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHH
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFI 284 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~ 284 (320)
..+|++||+|+.+|+++|+.|++++|||||+|+||+|+|||... ..+++..+.+...++.+|...|++++.++
T Consensus 155 ~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~-------~~~~~~~~~~~~~~pl~R~~~pedvA~~v 227 (259)
T d1xq1a_ 155 GSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEA-------VYDDEFKKVVISRKPLGRFGEPEEVSSLV 227 (259)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------------CCGGGGHHHH
T ss_pred cccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhh-------hchHHHHHHHHhCCCCCCCcCHHHHHHHH
Confidence 99999999999999999999999999999999999999999874 22345566677777888999999999999
Q ss_pred HHHHh
Q 020854 285 WGVLS 289 (320)
Q Consensus 285 ~~l~~ 289 (320)
.||++
T Consensus 228 ~fL~S 232 (259)
T d1xq1a_ 228 AFLCM 232 (259)
T ss_dssp HHHTS
T ss_pred HHHhC
Confidence 88875
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=100.00 E-value=6.1e-46 Score=326.36 Aligned_cols=232 Identities=23% Similarity=0.287 Sum_probs=202.7
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
.++++||++||||||+|||+++|++|+++|++|++++|++++++++.+++.+. +.++..+.+|++|. +++.++++.
T Consensus 3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~ 80 (259)
T d2ae2a_ 3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVCDLSSRSERQELMNTVA 80 (259)
T ss_dssp TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCCceEEEeeCCCHHHHHHHHHHHH
Confidence 36788999999999999999999999999999999999999999999999875 45788899999985 245556666
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCc
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
++++. ++|+||||||+... .++.+.+.++|++++++|+.|++++++.++|+|++++.|+||++||.++.. +.|+.
T Consensus 81 ~~~~~-~idilvnnAG~~~~--~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~--~~~~~ 155 (259)
T d2ae2a_ 81 NHFHG-KLNILVNNAGIVIY--KEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL--AVPYE 155 (259)
T ss_dssp HHTTT-CCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTS--CCTTC
T ss_pred HHhCC-CceEEEECCceecc--CccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccc--ccccc
Confidence 66653 36699999998764 678999999999999999999999999999999999999999999999988 78899
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHH
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIW 285 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~ 285 (320)
+.|++||+|+.+|+++|+.|++++|||||+|+||+|+|+|.+.... ....++..+.+...++.+|...|++++.++.
T Consensus 156 ~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~---~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~ 232 (259)
T d2ae2a_ 156 AVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQ---DPEQKENLNKLIDRCALRRMGEPKELAAMVA 232 (259)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTT---SHHHHHHHHHHHHTSTTCSCBCHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhh---chhhHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999763211 1224456677777888889999999999988
Q ss_pred HHHh
Q 020854 286 GVLS 289 (320)
Q Consensus 286 ~l~~ 289 (320)
||++
T Consensus 233 fL~S 236 (259)
T d2ae2a_ 233 FLCF 236 (259)
T ss_dssp HHHS
T ss_pred HHhC
Confidence 8876
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=2.7e-46 Score=328.55 Aligned_cols=230 Identities=26% Similarity=0.324 Sum_probs=204.5
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHc
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIE 129 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~ 129 (320)
.||++||||||+|||+++|++|+++|++|++++|++++++++.+++++. +.++..+++|++|. +++.++++.++++
T Consensus 1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~--g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g 78 (257)
T d2rhca1 1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTCDVRSVPEIEALVAAVVERYG 78 (257)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence 3899999999999999999999999999999999999999999999875 45789999999984 3667778888888
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHh--hhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPG--MLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~--l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
++| +||||||+... .++.+.+.++|++++++|+.|+++++|+++|+ |.+++.|+||++||.++.. +.++..+
T Consensus 79 ~iD--ilVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~--~~~~~~~ 152 (257)
T d2rhca1 79 PVD--VLVNNAGRPGG--GATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQ--GVVHAAP 152 (257)
T ss_dssp SCS--EEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTS--CCTTCHH
T ss_pred CCC--EEEecccccCC--CChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccc--ccccchh
Confidence 655 99999998765 77899999999999999999999999999997 5667789999999999998 7899999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc---cCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHH
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK---RSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFI 284 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~---~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~ 284 (320)
|++||+|+.+|+++|+.|++++|||||+|+||+|+|+|.... ........+++..+.+.+.++.+|...|++++.++
T Consensus 153 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~~v 232 (257)
T d2rhca1 153 YSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMV 232 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 999999999999999999999999999999999999997631 11122356888888999999999999999999999
Q ss_pred HHHHh
Q 020854 285 WGVLS 289 (320)
Q Consensus 285 ~~l~~ 289 (320)
.||++
T Consensus 233 ~fL~S 237 (257)
T d2rhca1 233 AYLIG 237 (257)
T ss_dssp HHHTS
T ss_pred HHHhC
Confidence 98875
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=5.4e-45 Score=317.09 Aligned_cols=210 Identities=23% Similarity=0.262 Sum_probs=185.2
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||++|||||++|||+++|++|+++|++|++++|++++++++.+++ +.+...+++|++|. +++.++++.++
T Consensus 3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 77 (244)
T d1nffa_ 3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL-----ADAARYVHLDVTQPAQWKAAVDTAVTA 77 (244)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----hCcceEEEeecCCHHHHHHHHHHHHHH
Confidence 467999999999999999999999999999999999999999888877 34578899999984 36777888888
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
++. +|+||||||.... .++++.+.++|++++++|+.|+++++|.++|.|++++.|+||++||.++.. +.++..+
T Consensus 78 ~g~--idilinnAG~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~--~~~~~~~ 151 (244)
T d1nffa_ 78 FGG--LHVLVNNAGILNI--GTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLA--GTVACHG 151 (244)
T ss_dssp HSC--CCEEEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CCTTBHH
T ss_pred hCC--CeEEEECCcccCC--CchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccccc--ccccccc
Confidence 886 4599999998765 789999999999999999999999999999999999999999999999988 7899999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc------ccCCCCCCCHHHHHHHHHHHhC
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI------KRSSFFVPSTDVYARAAMRWIG 270 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~------~~~~~~~~~~~~~a~~i~~~l~ 270 (320)
|++||+|+.+|+|+|+.|++++|||||+|+||+++|||... +.+...+.+|||+|+.++..+.
T Consensus 152 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~pl~R~~~p~diA~~v~fL~s 220 (244)
T d1nffa_ 152 YTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPEDIFQTALGRAAEPVEVSNLVVYLAS 220 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTTCSCCSSSSCBCHHHHHHHHHHHHS
T ss_pred hhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHHHHhccccCCCCHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999763 1222235577777777766554
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=100.00 E-value=9e-46 Score=324.84 Aligned_cols=230 Identities=21% Similarity=0.265 Sum_probs=200.1
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++++||+++|||||+|||+++|++|+++|++|++++|+.+++++..+++ +.++..+.+|++|+ +++.++++.+
T Consensus 1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~-----~~~~~~~~~Dvt~~~~v~~~~~~~~~ 75 (256)
T d1k2wa_ 1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI-----GPAACAIALDVTDQASIDRCVAELLD 75 (256)
T ss_dssp CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCceEEEEeeCCCHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999999999999888877 45688999999985 3677788888
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC-CCcEEEEEcCccccccCCCCCc
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-~~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
++++ +|+||||||.... .++.+.+.++|++++++|+.|+++++|.++|.|.++ +.|+||++||.++.. +.++.
T Consensus 76 ~~g~--iDilVnnAg~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~--~~~~~ 149 (256)
T d1k2wa_ 76 RWGS--IDILVNNAALFDL--APIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRR--GEALV 149 (256)
T ss_dssp HHSC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS--CCTTC
T ss_pred HhCC--ccEEEeecccccc--cccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcc--ccccc
Confidence 8886 5599999998764 678999999999999999999999999999986654 579999999999998 78999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcccc---CCCCCCCHHHHHHHHHHHhCCCCcccCCchHH
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKR---SSFFVPSTDVYARAAMRWIGYEPCCTPYWPHS 282 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~---~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~ 282 (320)
++|++||+|+.+|+++|+.|++++|||||+|+||+++|+|..... ......+.++..+.+...++.+|...|++++.
T Consensus 150 ~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~ 229 (256)
T d1k2wa_ 150 GVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTG 229 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHH
T ss_pred cchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 999999999999999999999999999999999999999976311 11112345566778888888899999999999
Q ss_pred HHHHHHh
Q 020854 283 FIWGVLS 289 (320)
Q Consensus 283 ~~~~l~~ 289 (320)
++.||++
T Consensus 230 ~v~fL~S 236 (256)
T d1k2wa_ 230 MAIFLAT 236 (256)
T ss_dssp HHHHTTS
T ss_pred HHHHHhC
Confidence 9888765
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=100.00 E-value=6.5e-45 Score=316.18 Aligned_cols=211 Identities=22% Similarity=0.239 Sum_probs=190.6
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCe-------EEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHH
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLN-------LVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERI 124 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~-------Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~ 124 (320)
++|||||||+|||+++|++|+++|++ |++++|+.++++++.+++++. +.++..+.+|++|. +++.++++
T Consensus 2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dvt~~~~v~~~~~~~ 79 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDTITADISDMADVRRLTTHI 79 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT--TCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHH
Confidence 57899999999999999999999998 999999999999999999875 46788999999984 36777888
Q ss_pred HHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCC
Q 020854 125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL 204 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~ 204 (320)
.++++++| +||||||.... .++.+.+.++|++++++|+.|+++++|.++|+|++++.|+||++||.++.. +.|+
T Consensus 80 ~~~~g~iD--ilvnnAg~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~--~~~~ 153 (240)
T d2bd0a1 80 VERYGHID--CLVNNAGVGRF--GALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATK--AFRH 153 (240)
T ss_dssp HHHTSCCS--EEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CCTT
T ss_pred HHHcCCcc--eeecccccccC--CccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcC--CCCC
Confidence 88888655 99999998765 789999999999999999999999999999999999999999999999998 7899
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc--cCCCCCCCHHHHHHHHHHHhCCC
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK--RSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~--~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
.+.|++||+|+.+|+++|+.|++++||+||+|+||+|+|+|+... .......+||++|+.++..+..+
T Consensus 154 ~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~PedvA~~v~~l~s~~ 223 (240)
T d2bd0a1 154 SSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEMQALMMMPEDIAAPVVQAYLQP 223 (240)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTTGGGSBCHHHHHHHHHHHHTSC
T ss_pred ChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHhhHhcCCCHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999999999999999998752 22334679999999999988765
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.4e-44 Score=314.47 Aligned_cols=219 Identities=21% Similarity=0.287 Sum_probs=193.9
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
|+++||++||||||+|||+++|++|+++|++|++++|+++++++..+++ ....+.+|++|. +++.++++.+
T Consensus 1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~-------~~~~~~~Dv~~~~~v~~~~~~~~~ 73 (242)
T d1ulsa_ 1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------GAHPVVMDVADPASVERGFAEALA 73 (242)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-------TCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-------CCeEEEEecCCHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999999999988876644 356789999984 4677788888
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
++++ +|+||||||+..+ .++.+.+.++|++++++|+.|+++++|.++|.|.+++.++|+++||. +.. +.++..
T Consensus 74 ~~g~--iDilVnnAG~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~-~~~--~~~~~~ 146 (242)
T d1ulsa_ 74 HLGR--LDGVVHYAGITRD--NFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASR-VYL--GNLGQA 146 (242)
T ss_dssp HHSS--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCG-GGG--CCTTCH
T ss_pred hcCC--ceEEEECCccccc--CchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccc-ccc--CCCCCc
Confidence 8886 5599999998765 77899999999999999999999999999999999888889888885 445 678899
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHH
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWG 286 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~ 286 (320)
+|++||+|+.+|+++|+.|++++|||||+|+||+++|+|... .+++..+.+...++.+|...|++++.++.|
T Consensus 147 ~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~--------~~~~~~~~~~~~~pl~R~~~pedia~~v~f 218 (242)
T d1ulsa_ 147 NYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAK--------VPEKVREKAIAATPLGRAGKPLEVAYAALF 218 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS--------SCHHHHHHHHHTCTTCSCBCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhc--------CCHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999864 356777888888888899999999999888
Q ss_pred HHh
Q 020854 287 VLS 289 (320)
Q Consensus 287 l~~ 289 (320)
|++
T Consensus 219 L~S 221 (242)
T d1ulsa_ 219 LLS 221 (242)
T ss_dssp HHS
T ss_pred Hhc
Confidence 875
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=100.00 E-value=6e-45 Score=320.14 Aligned_cols=226 Identities=21% Similarity=0.241 Sum_probs=193.2
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH-HHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP-DKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
+++||++|||||++|||+++|++|+++|++|++++|+. +.++++.+++++. +.++..+++|++|+ +++.++++.+
T Consensus 4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (261)
T d1geea_ 4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV--GGEAIAVKGDVTVESDVINLVQSAIK 81 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 46799999999999999999999999999999999985 5678888888765 45788999999984 3667788888
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCc-EEEEEcCccccccCCCCCc
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKG-AIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g-~Iv~vsS~~~~~~~~~~~~ 205 (320)
++++ +|+||||||+..+ .++.+.+.++|++++++|+.|+++++|.++|+|.+++.| +||++||.++.. +.|+.
T Consensus 82 ~~G~--iDiLVnnAG~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~--~~~~~ 155 (261)
T d1geea_ 82 EFGK--LDVMINNAGLENP--VSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI--PWPLF 155 (261)
T ss_dssp HHSC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS--CCTTC
T ss_pred HhCC--CCEeeccceecCC--cchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcc--cCccc
Confidence 8886 5599999998765 678999999999999999999999999999999887754 699999999988 78999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHH
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIW 285 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~ 285 (320)
.+|++||+|+.+|+++|+.|++++|||||+|+||+|+|+|..... ..++..+.+.+.++.+|...|++++.++.
T Consensus 156 ~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~------~~~~~~~~~~~~~pl~R~~~pediA~~v~ 229 (261)
T d1geea_ 156 VHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKF------ADPEQRADVESMIPMGYIGEPEEIAAVAA 229 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHH------HSHHHHHHHHTTCTTSSCBCHHHHHHHHH
T ss_pred cccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhc------CCHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999976311 12333455556666677778888888777
Q ss_pred HHHh
Q 020854 286 GVLS 289 (320)
Q Consensus 286 ~l~~ 289 (320)
||++
T Consensus 230 fL~S 233 (261)
T d1geea_ 230 WLAS 233 (261)
T ss_dssp HHHS
T ss_pred HHhC
Confidence 7765
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.4e-45 Score=318.34 Aligned_cols=226 Identities=20% Similarity=0.267 Sum_probs=195.6
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||++||||||+|||+++|++|+++|++|++++|++++++++.+++ ....++.+|++|. +++.++++.++
T Consensus 3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~------~~~~~~~~Dvs~~~~v~~~~~~~~~~ 76 (250)
T d1ydea1 3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL------PGAVFILCDVTQEDDVKTLVSETIRR 76 (250)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------TTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc------CCCeEEEccCCCHHHHHHHHHHHHHh
Confidence 367999999999999999999999999999999999999888776654 2367889999984 46777888888
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
++++ |+||||||.... ..++++.+.++|++++++|+.|+++++|+++|+|+++ +|+||++||.++.. +.++..+
T Consensus 77 ~g~i--DilVnnAG~~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~Ii~isS~~~~~--~~~~~~~ 150 (250)
T d1ydea1 77 FGRL--DCVVNNAGHHPP-PQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAI--GQAQAVP 150 (250)
T ss_dssp HSCC--CEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHH--CCTTCHH
T ss_pred cCCC--CEEEeccccccc-ccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC-CCCCcccccccccc--cccCcch
Confidence 8865 599999997643 3568899999999999999999999999999999864 59999999999998 7789999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHH
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGV 287 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l 287 (320)
|++||+|+.+|+++|+.|++++|||||+|+||+|+|+|.+.... ...++++..+......+.+|...|++++.++.||
T Consensus 151 Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~--~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v~fL 228 (250)
T d1ydea1 151 YVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAA--LMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFL 228 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHT--TSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHH
T ss_pred hHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhh--cCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999764211 1235666677777777888999999999999888
Q ss_pred Hh
Q 020854 288 LS 289 (320)
Q Consensus 288 ~~ 289 (320)
++
T Consensus 229 ~S 230 (250)
T d1ydea1 229 AS 230 (250)
T ss_dssp HH
T ss_pred hC
Confidence 75
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=100.00 E-value=6.1e-45 Score=318.52 Aligned_cols=224 Identities=23% Similarity=0.288 Sum_probs=189.9
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.. ..++..+.+|++|. +++.++++.++
T Consensus 3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (251)
T d1zk4a1 3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT---PDQIQFFQHDSSDEDGWTKLFDATEKA 79 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC---CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 36799999999999999999999999999999999999999998888743 44688999999984 46778888888
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCC-cEEEEEcCccccccCCCCCch
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~-g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
++++ |+||||||...+ .++.+.+.++|++++++|+.|++++++.++|+|++++. |+||++||.++.. +.|+..
T Consensus 80 ~G~i--DiLVnnAg~~~~--~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~--~~~~~~ 153 (251)
T d1zk4a1 80 FGPV--STLVNNAGIAVN--KSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFV--GDPSLG 153 (251)
T ss_dssp HSSC--CEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTS--CCTTCH
T ss_pred hCCc--eEEEeccccccc--cchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceec--cCCCch
Confidence 8865 599999999865 78999999999999999999999999999999998875 5999999999998 789999
Q ss_pred hhHHHHHHHHHHHHHHHHH--HccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHH
Q 020854 207 VYAATKAYIDQFSRSLYVE--YRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFI 284 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~e--l~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~ 284 (320)
+|++||+|+.+|+++|+.| ++++|||||+|+||+|+|+|.+.. ..+++ .......++.+|...|++++.++
T Consensus 154 ~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~------~~~~~-~~~~~~~~pl~R~~~pedvA~~v 226 (251)
T d1zk4a1 154 AYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL------PGAEE-AMSQRTKTPMGHIGEPNDIAYIC 226 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS------TTHHH-HHTSTTTCTTSSCBCHHHHHHHH
T ss_pred hHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhc------CCHHH-HHHHHhCCCCCCCcCHHHHHHHH
Confidence 9999999999999999999 568999999999999999997641 22222 22223344555667777777777
Q ss_pred HHHHh
Q 020854 285 WGVLS 289 (320)
Q Consensus 285 ~~l~~ 289 (320)
.||++
T Consensus 227 ~fL~S 231 (251)
T d1zk4a1 227 VYLAS 231 (251)
T ss_dssp HHHHS
T ss_pred HHHhC
Confidence 66654
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=100.00 E-value=8.2e-45 Score=316.97 Aligned_cols=189 Identities=25% Similarity=0.344 Sum_probs=162.9
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||++||||||+|||+++|++|+++|++|++++|+..+. ..+.+++. +.++..+.+|++|. +++.++++.++
T Consensus 2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~--~~~~~~~~--g~~~~~~~~Dvs~~~~v~~~~~~~~~~ 77 (247)
T d2ew8a1 2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPE--AEAAIRNL--GRRVLTVKCDVSQPGDVEAFGKQVIST 77 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHH--HHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHH--HHHHHHHc--CCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 46799999999999999999999999999999999987532 22333333 56789999999984 36777888888
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
++++ |+||||||+... .++.+.+.++|++++++|+.|+++++|+++|+|++++.|+||++||.++.. +.++.++
T Consensus 78 ~G~i--DilVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~--~~~~~~~ 151 (247)
T d2ew8a1 78 FGRC--DILVNNAGIYPL--IPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWL--KIEAYTH 151 (247)
T ss_dssp HSCC--CEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS--CCSSCHH
T ss_pred cCCC--CEEEECCCCCCC--CChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcc--cCccccc
Confidence 8864 599999999764 789999999999999999999999999999999999999999999999988 7899999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI 248 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~ 248 (320)
|++||+|+.+|+++|+.|++++|||||+|+||+++|+|.+.
T Consensus 152 Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~ 192 (247)
T d2ew8a1 152 YISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEA 192 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-------
T ss_pred chhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccc
Confidence 99999999999999999999999999999999999999763
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=3.7e-45 Score=319.14 Aligned_cols=223 Identities=24% Similarity=0.251 Sum_probs=188.6
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
++||++||||||+|||+++|++|+++|++|++++|+++..+ ..+++ + ...+++|++|. +++.++++.+++
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~-----~--~~~~~~Dv~~~~~v~~~~~~~~~~~ 74 (248)
T d2d1ya1 3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAI-----G--GAFFQVDLEDERERVRFVEEAAYAL 74 (248)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHH-----T--CEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHc-----C--CeEEEEeCCCHHHHHHHHHHHHHhc
Confidence 57999999999999999999999999999999999987543 33333 2 34678999984 467788888888
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
+++| +||||||+..+ .++.+.+.++|++++++|+.|+++++|+++|+|++++.|+||++||.++.. +.++..+|
T Consensus 75 G~iD--iLVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~--~~~~~~~Y 148 (248)
T d2d1ya1 75 GRVD--VLVNNAAIAAP--GSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLF--AEQENAAY 148 (248)
T ss_dssp SCCC--EEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS--BCTTBHHH
T ss_pred CCCC--eEEEeCcCCCC--CChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccc--cccccchh
Confidence 8654 99999998765 789999999999999999999999999999999999999999999999998 78999999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHHH
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVL 288 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l~ 288 (320)
++||+|+.+|+++|+.|++++|||||+|+||+++|||...... ....+++..+.+.+..+.+|...|++++.++.||+
T Consensus 149 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~--~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~ 226 (248)
T d2d1ya1 149 NASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIA--LSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLA 226 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC----------CHHHHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhh--cCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999998763111 12356667777777777788888999998888887
Q ss_pred h
Q 020854 289 S 289 (320)
Q Consensus 289 ~ 289 (320)
+
T Consensus 227 S 227 (248)
T d2d1ya1 227 S 227 (248)
T ss_dssp S
T ss_pred C
Confidence 5
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=100.00 E-value=7e-45 Score=316.78 Aligned_cols=219 Identities=25% Similarity=0.320 Sum_probs=193.9
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEE-eCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHcC
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEG 130 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~ 130 (320)
++|||||||+|||+++|++|+++|++|++. .|+++.++++.+++++. +.++..+++|++|. +++.++++.+++++
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 79 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY--GGQAITFGGDVSKEADVEAMMKTAIDAWGT 79 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--TCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 689999999999999999999999999987 56788888888888765 45788999999984 36677777888876
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHH
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA 210 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~a 210 (320)
+ |+||||||.... .++.+.+.++|++++++|+.|+++++|.++|+|+++++|+||++||.++.. +.++.++|++
T Consensus 80 i--DiLVnnAg~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~--~~~~~~~Y~a 153 (244)
T d1edoa_ 80 I--DVVVNNAGITRD--TLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLI--GNIGQANYAA 153 (244)
T ss_dssp C--SEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH--CCTTCHHHHH
T ss_pred C--Cccccccccccc--cchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcC--CCCCCHHHHH
Confidence 4 499999998765 789999999999999999999999999999999999999999999999998 7889999999
Q ss_pred HHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHHH
Q 020854 211 TKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVL 288 (320)
Q Consensus 211 sKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l~ 288 (320)
||+|+.+|+++|+.|++++|||||+|+||+++|+|... .+++..+.+.+.++.+|...|++++.++.||+
T Consensus 154 sKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~--------~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fLa 223 (244)
T d1edoa_ 154 AKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAK--------LGEDMEKKILGTIPLGRTGQPENVAGLVEFLA 223 (244)
T ss_dssp HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT--------TCHHHHHHHHTSCTTCSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHH--------hhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999764 23456666677777778888888888887774
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=100.00 E-value=4.8e-44 Score=313.93 Aligned_cols=232 Identities=21% Similarity=0.277 Sum_probs=198.7
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++++||+||||||++|||+++|++|+++|++|++++|++++++++.+++++. +..++.+.+|+++. +++.++++.+
T Consensus 2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~ 79 (258)
T d1ae1a_ 2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVCDLLSRTERDKLMQTVAH 79 (258)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCCceEEEeecCCHHHHHHHHHHHHH
Confidence 5688999999999999999999999999999999999999999999999775 45678889999985 3556666677
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
.++. .+|+||||||.... .++.+.+.++|++++++|+.+++.+++.++|.|.+++.|+||++||.++.. +.++..
T Consensus 80 ~~~g-~idilinnag~~~~--~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~--~~~~~~ 154 (258)
T d1ae1a_ 80 VFDG-KLNILVNNAGVVIH--KEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFS--ALPSVS 154 (258)
T ss_dssp HTTS-CCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTS--CCTTCH
T ss_pred HhCC-CcEEEecccccccc--CccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccccc--ccccch
Confidence 7643 46699999998775 689999999999999999999999999999999999999999999999988 789999
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHH
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWG 286 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~ 286 (320)
.|+++|+|+.+|+++|+.|++++|||||+|+||+++|||....... ...+++..+.+....+.+|...|++++.++.|
T Consensus 155 ~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~--~~~~~~~~~~~~~~~plgR~~~pediA~~v~f 232 (258)
T d1ae1a_ 155 LYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKK--NPHQKEEIDNFIVKTPMGRAGKPQEVSALIAF 232 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhh--hhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998642211 12356677788888888999999999999998
Q ss_pred HHh
Q 020854 287 VLS 289 (320)
Q Consensus 287 l~~ 289 (320)
|++
T Consensus 233 L~S 235 (258)
T d1ae1a_ 233 LCF 235 (258)
T ss_dssp HHS
T ss_pred HhC
Confidence 875
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=100.00 E-value=1.4e-45 Score=322.71 Aligned_cols=210 Identities=23% Similarity=0.267 Sum_probs=182.9
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++..+++|++|+ +++.++++.++
T Consensus 2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 76 (254)
T d1hdca_ 2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVTIEEDWQRVVAYAREE 76 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCceEEEEcccCCHHHHHHHHHHHHHH
Confidence 367999999999999999999999999999999999999988877766 45688999999984 46777888888
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
+++ +|+||||||+..+ .++.+.+.++|++++++|+.|+++++|.++|+|++++.|+||++||.++.. +.++.++
T Consensus 77 ~g~--iDilVnnAg~~~~--~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~--~~~~~~~ 150 (254)
T d1hdca_ 77 FGS--VDGLVNNAGISTG--MFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLM--GLALTSS 150 (254)
T ss_dssp HSC--CCEEEECCCCCCC--SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CCTTCHH
T ss_pred cCC--ccEEEecCccccc--cccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcc--cccchhh
Confidence 886 4599999999765 779999999999999999999999999999999999999999999999998 7889999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc-----------cCCCCC-CCHHHHHHHHHHHhC
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK-----------RSSFFV-PSTDVYARAAMRWIG 270 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~-----------~~~~~~-~~~~~~a~~i~~~l~ 270 (320)
|++||+|+.+|+++|+.|++++|||||+|+||+|+|+|.... .+.... .+|||+|+.++..+.
T Consensus 151 Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~g~~PedvA~~v~fL~S 225 (254)
T d1hdca_ 151 YGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLS 225 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999987521 111112 257777777776553
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=100.00 E-value=7e-45 Score=319.05 Aligned_cols=228 Identities=24% Similarity=0.286 Sum_probs=196.0
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHcCC
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEGL 131 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~ 131 (320)
|+||||||++|||+++|++|+++|++|++++|++++++++.+++++. +.++..+++|++|. +++.++++.+++++
T Consensus 2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~- 78 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVSDRDQVFAAVEQARKTLGG- 78 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHTTC-
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHHhCC-
Confidence 78999999999999999999999999999999999999999999876 45788999999984 36677777788876
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcCccccccCCCCCchhhHH
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYAA 210 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS~~~~~~~~~~~~~~Y~a 210 (320)
+|+||||||+... .++.+.+.++|++++++|+.|+++++|+++|+|.+++ .++||++||.++.. +.|+.+.|++
T Consensus 79 -iDilVnnAG~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~--~~~~~~~Y~a 153 (255)
T d1gega_ 79 -FDVIVNNAGVAPS--TPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV--GNPELAVYSS 153 (255)
T ss_dssp -CCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS--CCTTBHHHHH
T ss_pred -ccEEEeccccccc--CcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcc--cCcccccchh
Confidence 5599999998764 7899999999999999999999999999999877654 68899999999988 7899999999
Q ss_pred HHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc---cCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHH
Q 020854 211 TKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK---RSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGV 287 (320)
Q Consensus 211 sKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~---~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l 287 (320)
||+|+.+|+++|+.|++++|||||+|+||+++|||.... .........++..+.+.+.++.+|...|++++.++.||
T Consensus 154 sKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL 233 (255)
T d1gega_ 154 SKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYL 233 (255)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHH
T ss_pred CHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 999999999999999999999999999999999997631 00011123345556667777778888888888888887
Q ss_pred Hh
Q 020854 288 LS 289 (320)
Q Consensus 288 ~~ 289 (320)
++
T Consensus 234 ~S 235 (255)
T d1gega_ 234 AS 235 (255)
T ss_dssp HS
T ss_pred hC
Confidence 75
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.6e-44 Score=314.17 Aligned_cols=221 Identities=26% Similarity=0.295 Sum_probs=194.7
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
++++||++|||||++|||+++|++|+++|++|++++|++++++++.+++. .+..+.+|++|. +.++++.+++
T Consensus 1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~------~~~~~~~Dv~~~--~~v~~~~~~~ 72 (242)
T d1cyda_ 1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP------GIEPVCVDLGDW--DATEKALGGI 72 (242)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST------TCEEEECCTTCH--HHHHHHHTTC
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC------CCeEEEEeCCCH--HHHHHHHHHc
Confidence 35779999999999999999999999999999999999998887766542 366788999987 6778888877
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhc-CCCcEEEEEcCccccccCCCCCchh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK-RKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~-~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
++ +|+||||||+... .++.+.+.++|++++++|+.|+++++|.++|.|.+ +.+|+||++||.++.. +.|+..+
T Consensus 73 g~--iDilVnnAg~~~~--~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~--~~~~~~~ 146 (242)
T d1cyda_ 73 GP--VDLLVNNAALVIM--QPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV--TFPNLIT 146 (242)
T ss_dssp CC--CSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS--CCTTBHH
T ss_pred CC--CeEEEECCccccc--hhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccc--cCCcccc
Confidence 75 5599999998764 78999999999999999999999999999998654 4579999999999988 7899999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHH
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGV 287 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l 287 (320)
|++||+|+.+|+++|+.|++++|||||+|+||+++|+|.... ...++..+.+....+.+|...|++++.++.||
T Consensus 147 Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~------~~~~~~~~~~~~~~pl~R~~~peeva~~v~fL 220 (242)
T d1cyda_ 147 YSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKV------SADPEFARKLKERHPLRKFAEVEDVVNSILFL 220 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHH------TCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhh------cCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999997642 23356677788888888999999999998888
Q ss_pred Hh
Q 020854 288 LS 289 (320)
Q Consensus 288 ~~ 289 (320)
++
T Consensus 221 ~S 222 (242)
T d1cyda_ 221 LS 222 (242)
T ss_dssp HS
T ss_pred hC
Confidence 75
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=5.4e-44 Score=314.98 Aligned_cols=235 Identities=25% Similarity=0.320 Sum_probs=186.4
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKY-AKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
+++||++||||||+|||+++|++|+++|++|++++|++++++++.+++.+.+ ...++..+++|++|. +++.++++.+
T Consensus 2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (264)
T d1spxa_ 2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG 81 (264)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence 3679999999999999999999999999999999999999999999998764 345799999999984 4677788888
Q ss_pred HHcCCCeEEEEEccCCCCC--ccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcc-ccccCCCC
Q 020854 127 AIEGLDVGVLINNVGISYP--YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGA-AIVIPSDP 203 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~-~~~~~~~~ 203 (320)
+++++| +||||||...+ ...++.+.+.|+|++++++|+.|+++++|.++|+|++++ |++|+++|.. +.. +.|
T Consensus 82 ~~g~iD--ilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~--~~~ 156 (264)
T d1spxa_ 82 KFGKLD--ILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLH--ATP 156 (264)
T ss_dssp HHSCCC--EEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSS--CCT
T ss_pred HhCCCC--EeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-Ccceeeeeeccccc--cCC
Confidence 888655 99999998653 124566779999999999999999999999999998764 5666666655 555 678
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcccc-CCCCCCCHHHHHHHHHHHhCCCCcccCCchHH
Q 020854 204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKR-SSFFVPSTDVYARAAMRWIGYEPCCTPYWPHS 282 (320)
Q Consensus 204 ~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~ 282 (320)
+..+|++||+|+.+|+++|+.|++++|||||+|+||+|+|+|..... +.......++..+.+.+.++.+|...|++++.
T Consensus 157 ~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~ 236 (264)
T d1spxa_ 157 DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAE 236 (264)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHH
T ss_pred CchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 89999999999999999999999999999999999999999987421 11122334455566777888889999999999
Q ss_pred HHHHHHh
Q 020854 283 FIWGVLS 289 (320)
Q Consensus 283 ~~~~l~~ 289 (320)
++.||++
T Consensus 237 ~v~fL~S 243 (264)
T d1spxa_ 237 VIAFLAD 243 (264)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 9988875
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-44 Score=313.66 Aligned_cols=222 Identities=27% Similarity=0.323 Sum_probs=193.8
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA 127 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 127 (320)
++.++||++|||||++|||+++|++|+++|++|++++|++++++++.+++. .+..+.+|++|. +.++++.++
T Consensus 2 ~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~------~~~~~~~Dv~d~--~~v~~~~~~ 73 (244)
T d1pr9a_ 2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP------GIEPVCVDLGDW--EATERALGS 73 (244)
T ss_dssp CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST------TCEEEECCTTCH--HHHHHHHTT
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC------CCeEEEEeCCCH--HHHHHHHHH
Confidence 466889999999999999999999999999999999999999888776552 367788999987 777888887
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhh-cCCCcEEEEEcCccccccCCCCCch
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGML-KRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~-~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
+++ +|+||||||.... .++.+.+.++|++++++|+.+++++++.++|.|. +++.|+||++||.++.. +.|+..
T Consensus 74 ~g~--iDilVnnAg~~~~--~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~--~~~~~~ 147 (244)
T d1pr9a_ 74 VGP--VDLLVNNAAVALL--QPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR--AVTNHS 147 (244)
T ss_dssp CCC--CCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS--CCTTBH
T ss_pred hCC--ceEEEeccccccc--cchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccc--cccchh
Confidence 775 5599999999765 7899999999999999999999999999999755 45689999999999988 788999
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHH
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWG 286 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~ 286 (320)
+|++||+|+.+|+++|+.|++++|||||+|+||+|+|+|.+.. ...++..+.+.+.++.+|...|++++.++.|
T Consensus 148 ~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~------~~~~~~~~~~~~~~pl~R~~~peevA~~v~f 221 (244)
T d1pr9a_ 148 VYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQAT------WSDPHKAKTMLNRIPLGKFAEVEHVVNAILF 221 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTT------SCSHHHHHHHHTTCTTCSCBCHHHHHHHHHH
T ss_pred hhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhh------ccChHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999997641 2233455666777778888889999988888
Q ss_pred HHh
Q 020854 287 VLS 289 (320)
Q Consensus 287 l~~ 289 (320)
|++
T Consensus 222 L~S 224 (244)
T d1pr9a_ 222 LLS 224 (244)
T ss_dssp HHS
T ss_pred HhC
Confidence 775
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=1.5e-44 Score=313.22 Aligned_cols=213 Identities=24% Similarity=0.316 Sum_probs=181.3
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||++||||||+|||+++|++|+++|++|++++|+.++. ..+..+++|++|. +++.++++.++
T Consensus 4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-------------~~~~~~~~Dv~~~~~v~~~~~~~~~~ 70 (237)
T d1uzma1 4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP-------------KGLFGVEVDVTDSDAVDRAFTAVEEH 70 (237)
T ss_dssp CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-------------TTSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh-------------cCceEEEEecCCHHHHHHHHHHHHHh
Confidence 36799999999999999999999999999999999997653 3467899999984 46777888888
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
++++| +||||||+..+ .++.+.+.++|++++++|+.++++++|.++|+|++++.|+||++||.++.. +.++..+
T Consensus 71 ~g~iD--iLVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~--~~~~~~~ 144 (237)
T d1uzma1 71 QGPVE--VLVSNAGLSAD--AFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLW--GIGNQAN 144 (237)
T ss_dssp HSSCS--EEEEECSCCC-------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-------CCHH
T ss_pred cCCce--EEEeeeccccc--ccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhcc--CCcccHH
Confidence 88655 99999998765 779999999999999999999999999999999999999999999999998 7789999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHH
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGV 287 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l 287 (320)
|++||+|+.+|+++|+.|++++|||||+|+||+++|+|.+. .+++..+...+.++.+|...|++++.++.||
T Consensus 145 Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~--------~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL 216 (237)
T d1uzma1 145 YAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRA--------LDERIQQGALQFIPAKRVGTPAEVAGVVSFL 216 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH--------SCHHHHHHHGGGCTTCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhc--------cCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999764 2455666677777788888888888888887
Q ss_pred Hh
Q 020854 288 LS 289 (320)
Q Consensus 288 ~~ 289 (320)
++
T Consensus 217 ~S 218 (237)
T d1uzma1 217 AS 218 (237)
T ss_dssp HS
T ss_pred hC
Confidence 65
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=100.00 E-value=3e-43 Score=310.86 Aligned_cols=229 Identities=22% Similarity=0.208 Sum_probs=186.5
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||+|||||||+|||+++|++|+++|++|++++|++++++++.+++.. ...+.++.+|++|. +++.++++.++
T Consensus 3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (268)
T d2bgka1 3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS---PDVISFVHCDVTKDEDVRNLVDTTIAK 79 (268)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC---CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 47799999999999999999999999999999999999999999988854 33577889999984 46777888888
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCC-ch
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL-YS 206 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~-~~ 206 (320)
++++ |+||||||........+.+.+.++|++++++|+.|+++++|.++|+|.+++.|+||++||.++.. +.++ ..
T Consensus 80 ~g~i--D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~--~~~~~~~ 155 (268)
T d2bgka1 80 HGKL--DIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFT--AGEGVSH 155 (268)
T ss_dssp HSCC--CEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTC--CCTTSCH
T ss_pred cCCc--ceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccc--ccccccc
Confidence 8864 59999999876534467899999999999999999999999999999999999999999999987 4344 45
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHH-hCCCCcccCCchHHHHH
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRW-IGYEPCCTPYWPHSFIW 285 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~-l~~~~~~~~~~~~~~~~ 285 (320)
.|++||+|+.+|+++|+.|++++|||||+|+||+++|+|..... ..++++..+..... ...+|...|++++.++.
T Consensus 156 ~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~----~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~ 231 (268)
T d2bgka1 156 VYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVF----GVDSSRVEELAHQAANLKGTLLRAEDVADAVA 231 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSS----SCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHH
T ss_pred ccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhh----cCCHHHHHHHHHhccccCCCCcCHHHHHHHHH
Confidence 89999999999999999999999999999999999999976411 11233222222211 12335566666666666
Q ss_pred HHHh
Q 020854 286 GVLS 289 (320)
Q Consensus 286 ~l~~ 289 (320)
||++
T Consensus 232 fL~S 235 (268)
T d2bgka1 232 YLAG 235 (268)
T ss_dssp HHHS
T ss_pred HHhC
Confidence 6654
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=1.8e-43 Score=313.08 Aligned_cols=234 Identities=23% Similarity=0.293 Sum_probs=194.5
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcC-CceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYA-KTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
+++||+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+. ..++..+.+|++|. +++.++++.+
T Consensus 1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (274)
T d1xhla_ 1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA 80 (274)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence 36799999999999999999999999999999999999999999999987643 35799999999984 4677788888
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
++++ +|+||||||.......+..+.+.++|++++++|+.|+++++|+++|+|++++.|+|+++||.++.. +.++.+
T Consensus 81 ~~G~--iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~--~~~~~~ 156 (274)
T d1xhla_ 81 KFGK--IDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQ--AHSGYP 156 (274)
T ss_dssp HHSC--CCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSS--CCTTSH
T ss_pred HcCC--ceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccc--cCCCCc
Confidence 8886 459999999865544456678899999999999999999999999999999999999999999887 778899
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHH---HHHhCCCCcccCCchHHH
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAA---MRWIGYEPCCTPYWPHSF 283 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i---~~~l~~~~~~~~~~~~~~ 283 (320)
+|++||+|+.+|+++|+.|++++|||||+|+||+|+|||........ ...++..+.+ ...++.+|...|++++.+
T Consensus 157 ~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~--~~~~~~~~~~~~~~~~iPlgR~g~pediA~~ 234 (274)
T d1xhla_ 157 YYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPE--TASDKLYSFIGSRKECIPVGHCGKPEEIANI 234 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCH--HHHHHHHHHHHHCTTTCTTSSCBCHHHHHHH
T ss_pred eehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccc--hhhHHHHHHHHHHHcCCCCCCCcCHHHHHHH
Confidence 99999999999999999999999999999999999999876411000 0111211111 223455677888888888
Q ss_pred HHHHHh
Q 020854 284 IWGVLS 289 (320)
Q Consensus 284 ~~~l~~ 289 (320)
+.||++
T Consensus 235 v~fL~S 240 (274)
T d1xhla_ 235 IVFLAD 240 (274)
T ss_dssp HHHHHC
T ss_pred HHHHcC
Confidence 877764
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=100.00 E-value=4.5e-44 Score=313.29 Aligned_cols=186 Identities=25% Similarity=0.295 Sum_probs=168.9
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||++||||||+|||+++|++|+++|++|++++|++++++++.+++ +.+...+++|++|. +++.++++.++
T Consensus 3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 77 (253)
T d1hxha_ 3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRHDVSSEADWTLVMAAVQRR 77 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCCeEEEEeecCCHHHHHHHHHHHHHH
Confidence 367999999999999999999999999999999999999999888877 45678899999984 46777888888
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
++++ |+||||||...+ .++.+.+.++|++++++|+.|++++++.++|+|+++ +|+||++||.++.. +.++.++
T Consensus 78 ~g~i--DilVnnAG~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~G~Iv~isS~~~~~--~~~~~~~ 150 (253)
T d1hxha_ 78 LGTL--NVLVNNAGILLP--GDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET-GGSIINMASVSSWL--PIEQYAG 150 (253)
T ss_dssp HCSC--CEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTS--CCTTBHH
T ss_pred hCCC--CeEEecccccCC--CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc-CCceecccchhhhc--Ccccccc
Confidence 8865 499999998765 678999999999999999999999999999999754 69999999999988 7899999
Q ss_pred hHHHHHHHHHHHHHHHHHHccC--CceEEEEeccceecCCCc
Q 020854 208 YAATKAYIDQFSRSLYVEYRKS--GIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~--gi~v~~v~PG~v~T~~~~ 247 (320)
|++||+|+.+|+++|+.|++++ |||||+|+||+++|+|.+
T Consensus 151 Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~ 192 (253)
T d1hxha_ 151 YSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQ 192 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHH
T ss_pred ccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHH
Confidence 9999999999999999999874 599999999999999875
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=100.00 E-value=4.2e-43 Score=308.58 Aligned_cols=232 Identities=22% Similarity=0.279 Sum_probs=200.5
Q ss_pred CCcccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHH
Q 020854 45 PAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVE 122 (320)
Q Consensus 45 ~~~~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~ 122 (320)
|..+++++||+|||||||+|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++..+++|++|. +++.++
T Consensus 1 p~~~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~ 79 (260)
T d1h5qa_ 1 PGFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVSNTDIVTKTIQ 79 (260)
T ss_dssp CCEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH-TCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCcccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh-CCceEEEEccCCCHHHHHHHHH
Confidence 345678899999999999999999999999999999999999999999888886655 45788999999985 356667
Q ss_pred HHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhc-CCCcEEEEEcCccccccC-
Q 020854 123 RIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK-RKKGAIVNIGSGAAIVIP- 200 (320)
Q Consensus 123 ~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~-~~~g~Iv~vsS~~~~~~~- 200 (320)
++.++++ ++|+||||||...+ .++.+.+.++|++++++|+.|++++++.++|+|.+ +..|+|++++|.......
T Consensus 80 ~~~~~~g--~iDilVnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~ 155 (260)
T d1h5qa_ 80 QIDADLG--PISGLIANAGVSVV--KPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQ 155 (260)
T ss_dssp HHHHHSC--SEEEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCE
T ss_pred HHHHHhC--CCcEeccccccccc--CCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccc
Confidence 7777776 47799999998764 77899999999999999999999999999999864 457788888887765421
Q ss_pred ----CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCccc
Q 020854 201 ----SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCT 276 (320)
Q Consensus 201 ----~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~ 276 (320)
+.++..+|++||+|+.+|+++|+.|++++|||||+|+||+|+|+|... .+++..+.+.+.++.+|...
T Consensus 156 ~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~--------~~~~~~~~~~~~~pl~R~g~ 227 (260)
T d1h5qa_ 156 SSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAH--------MDKKIRDHQASNIPLNRFAQ 227 (260)
T ss_dssp EETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG--------SCHHHHHHHHHTCTTSSCBC
T ss_pred cccccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhc--------cCHHHHHHHHhcCCCCCCcC
Confidence 235678999999999999999999999999999999999999999874 24566777888888899999
Q ss_pred CCchHHHHHHHHh
Q 020854 277 PYWPHSFIWGVLS 289 (320)
Q Consensus 277 ~~~~~~~~~~l~~ 289 (320)
|++++.++.||++
T Consensus 228 pedvA~~v~fL~S 240 (260)
T d1h5qa_ 228 PEEMTGQAILLLS 240 (260)
T ss_dssp GGGGHHHHHHHHS
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999875
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=8.6e-44 Score=314.94 Aligned_cols=229 Identities=23% Similarity=0.324 Sum_probs=187.5
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKY-AKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
++||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+ .+.++..+++|++|. +++.++++.++
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~ 82 (272)
T d1xkqa_ 3 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ 82 (272)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 679999999999999999999999999999999999999999999998764 345799999999984 46777888888
Q ss_pred HcCCCeEEEEEccCCCCCc--cccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCc
Q 020854 128 IEGLDVGVLINNVGISYPY--ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~--~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
++++| +||||||...+. .....+.+.++|++++++|+.|+++++|+++|+|++++++.|+++||.++.. +.++.
T Consensus 83 ~g~iD--ilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~--~~~~~ 158 (272)
T d1xkqa_ 83 FGKID--VLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQ--AQPDF 158 (272)
T ss_dssp HSCCC--EEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSS--CCCSS
T ss_pred hCCce--EEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhcccc--CCCCc
Confidence 88655 999999987641 1233567888999999999999999999999999876544444444456777 78899
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHH-------HHHHhCCCCcccCC
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARA-------AMRWIGYEPCCTPY 278 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~-------i~~~l~~~~~~~~~ 278 (320)
.+|++||+|+.+|+++|+.|++++|||||+|+||+|+|+|.... ..+++..+. ....++.+|...|+
T Consensus 159 ~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~------~~~~~~~~~~~~~~~~~~~~~PlgR~g~pe 232 (272)
T d1xkqa_ 159 LYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAM------GMPDQASQKFYNFMASHKECIPIGAAGKPE 232 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHT------TCCHHHHHHHHHHHHHCTTTCTTSSCBCHH
T ss_pred chhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhcc------CCchHHHHHHHHHHHHHhcCCCCCCCcCHH
Confidence 99999999999999999999999999999999999999997641 112222222 12234556888888
Q ss_pred chHHHHHHHHh
Q 020854 279 WPHSFIWGVLS 289 (320)
Q Consensus 279 ~~~~~~~~l~~ 289 (320)
+++.++.||++
T Consensus 233 diA~~v~fL~S 243 (272)
T d1xkqa_ 233 HIANIILFLAD 243 (272)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhC
Confidence 88888888765
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.1e-43 Score=306.40 Aligned_cols=227 Identities=24% Similarity=0.285 Sum_probs=191.3
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
++||+|||||||+|||+++|++|+++|++|++++|++++++++.+++++.+.+.++..++||++++ +++.++++.+++
T Consensus 8 lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~ 87 (257)
T d1xg5a_ 8 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH 87 (257)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 779999999999999999999999999999999999999999999999987777899999999984 467788888888
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC--CcEEEEEcCccccccCCCCCch
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK--KGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~--~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
+++| +||||||...+ .++.+.+.++|++.+++|+.+++++++.++|.|++++ +|+||++||.++....|.++..
T Consensus 88 g~iD--~lVnnAg~~~~--~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~ 163 (257)
T d1xg5a_ 88 SGVD--ICINNAGLARP--DTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTH 163 (257)
T ss_dssp CCCS--EEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGH
T ss_pred CCCC--EEEecccccCC--CccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccH
Confidence 8755 99999998765 6799999999999999999999999999999998765 6999999999997633456678
Q ss_pred hhHHHHHHHHHHHHHHHHHH--ccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHH
Q 020854 207 VYAATKAYIDQFSRSLYVEY--RKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFI 284 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el--~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~ 284 (320)
.|++||+|+.+|+++|+.|+ +++||+||+|+||+++|++....... .+ +......+.+|...|++++.++
T Consensus 164 ~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~----~~----~~~~~~~~~~r~~~pedvA~~v 235 (257)
T d1xg5a_ 164 FYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDK----DP----EKAAATYEQMKCLKPEDVAEAV 235 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTT----CH----HHHHHHHC---CBCHHHHHHHH
T ss_pred HHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChh----hH----HHHHhcCCCCCCcCHHHHHHHH
Confidence 89999999999999999998 78999999999999999987642111 12 2334444556666777777766
Q ss_pred HHHHh
Q 020854 285 WGVLS 289 (320)
Q Consensus 285 ~~l~~ 289 (320)
.||++
T Consensus 236 ~fL~s 240 (257)
T d1xg5a_ 236 IYVLS 240 (257)
T ss_dssp HHHHH
T ss_pred HHHhC
Confidence 66654
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.5e-43 Score=308.49 Aligned_cols=243 Identities=21% Similarity=0.219 Sum_probs=201.4
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
++||++||||||+|||+++|++|+++|++|++++|++++++++.+++.+.. +.....+.+|.++. .....+.+.+.+
T Consensus 12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 90 (269)
T d1xu9a_ 12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG-AASAHYIAGTMEDMTFAEQFVAQAGKLM 90 (269)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT-CSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhh-cccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence 789999999999999999999999999999999999999999999887664 56788888888864 244556666666
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
+..+ ++|||||.... .++.+.+.+++++++++|+.|++.+++.++|+|++ ++|+||++||.++.. +.|+.++|
T Consensus 91 g~~~--~li~nag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~-~~G~ii~isS~~~~~--~~p~~~~Y 163 (269)
T d1xu9a_ 91 GGLD--MLILNHITNTS--LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQ-SNGSIVVVSSLAGKV--AYPMVAAY 163 (269)
T ss_dssp TSCS--EEEECCCCCCC--CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEEEEGGGTS--CCTTCHHH
T ss_pred CCcc--ccccccccccc--cccccCCHHHhhhheeeehhhHHHHHHHHHHHHHh-cCCcceEeccchhcC--CCCCchHH
Confidence 7545 99999998765 66788999999999999999999999999999974 579999999999998 78999999
Q ss_pred HHHHHHHHHHHHHHHHHHcc--CCceEEEEeccceecCCCccc---cCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHH
Q 020854 209 AATKAYIDQFSRSLYVEYRK--SGIDVQCQVPLYVATKMASIK---RSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSF 283 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~--~gi~v~~v~PG~v~T~~~~~~---~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~ 283 (320)
++||+|+.+|+++|+.|+++ .||+|++|+||+|+|+|.... .+.....+||++|+.++..+..++.........+
T Consensus 164 ~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~~~~~~~~~~~~e~~a~~i~~~~~~~~~~i~~~~~~~ 243 (269)
T d1xu9a_ 164 SASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGALRQEEVYYDSSLW 243 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGGGGGGCBCHHHHHHHHHHHHHTTCSEEEECSCHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhccCCccccCCCHHHHHHHHHHHhhcCCCEEEccHHHH
Confidence 99999999999999999975 579999999999999997532 1223356899999999998877644322222334
Q ss_pred HHHHHhhchHHHHHHHHH
Q 020854 284 IWGVLSILPEKLIDAGRL 301 (320)
Q Consensus 284 ~~~l~~~~P~~~~~~~~~ 301 (320)
..++.+.+|.++.+++..
T Consensus 244 ~~~l~~~~~~~i~~~~~~ 261 (269)
T d1xu9a_ 244 TTLLIRNPSRKILEFLYS 261 (269)
T ss_dssp HHHHSCCHHHHHHHHHHG
T ss_pred HHHHHHHhHHHHHHHHHH
Confidence 555667777777776554
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=100.00 E-value=1.8e-42 Score=306.94 Aligned_cols=230 Identities=17% Similarity=0.170 Sum_probs=190.0
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
|+++||++||||||+|||+++|++|+++|++|++++|+.+++++..+++ +.++..+.+|+++. +++.++++.+
T Consensus 1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~ 75 (276)
T d1bdba_ 1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH-----GDNVLGIVGDVRSLEDQKQAASRCVA 75 (276)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCCeeEEecccccHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999999999988877665 45789999999984 3677788888
Q ss_pred HHcCCCeEEEEEccCCCCCcc---ccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCC
Q 020854 127 AIEGLDVGVLINNVGISYPYA---RFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP 203 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~---~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~ 203 (320)
+++++| ++|||||+..... ....+.+.+.|++++++|+.|+++++|.++|+|+++ +|+||+++|.++.. +.+
T Consensus 76 ~~g~id--ilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~g~iI~i~S~~~~~--~~~ 150 (276)
T d1bdba_ 76 RFGKID--TLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVAS-RGNVIFTISNAGFY--PNG 150 (276)
T ss_dssp HHSCCC--EEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGTS--TTS
T ss_pred HhCCcc--cccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhc-CCCceeeeechhcc--CCC
Confidence 888655 9999999865321 223455567899999999999999999999999876 58999999999988 789
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccC--CCCCCCHHHHHHHHHHHhCCCCcccCCchH
Q 020854 204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRS--SFFVPSTDVYARAAMRWIGYEPCCTPYWPH 281 (320)
Q Consensus 204 ~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~--~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~ 281 (320)
+.++|++||+|+.+|+++|+.|+++. ||||+|+||+|+|+|...... .......++..+.+...++.+|...|++..
T Consensus 151 ~~~~Y~asKaal~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeva 229 (276)
T d1bdba_ 151 GGPLYTAAKHAIVGLVRELAFELAPY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYT 229 (276)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGGGGS
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhcc-eEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHHHHH
Confidence 99999999999999999999999874 999999999999999763211 112234455667777778888999999999
Q ss_pred HHHHHHHh
Q 020854 282 SFIWGVLS 289 (320)
Q Consensus 282 ~~~~~l~~ 289 (320)
.++.||++
T Consensus 230 ~~v~fL~S 237 (276)
T d1bdba_ 230 GAYVFFAT 237 (276)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHcC
Confidence 98888764
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-43 Score=308.24 Aligned_cols=225 Identities=23% Similarity=0.286 Sum_probs=188.7
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~ 128 (320)
++||+|||||||+|||+++|++|+++|++|++++|+.+++++..+++.+..++.++.++++|++|. +++.++++.+++
T Consensus 1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (254)
T d2gdza1 1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF 80 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 369999999999999999999999999999999999999999999998877778899999999984 467778888888
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC---CcEEEEEcCccccccCCCCCc
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK---KGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~---~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
+++ |+||||||.... ++|++++++|+.+++++++.++|+|.+++ .|+||++||.++.. +.++.
T Consensus 81 G~i--DilVnnAg~~~~----------~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~--~~~~~ 146 (254)
T d2gdza1 81 GRL--DILVNNAGVNNE----------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM--PVAQQ 146 (254)
T ss_dssp SCC--CEEEECCCCCCS----------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS--CCTTC
T ss_pred CCc--Ceeccccccccc----------ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhcc--CCCCc
Confidence 864 599999998643 23788999999999999999999998764 48899999999998 78999
Q ss_pred hhhHHHHHHHHHHHHH--HHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHH
Q 020854 206 SVYAATKAYIDQFSRS--LYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSF 283 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~--l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~ 283 (320)
++|++||+|+.+|+|+ |+.|++++|||||+|+||+|+|+|.+............+..+.+...++.+|...|++++.+
T Consensus 147 ~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~ 226 (254)
T d2gdza1 147 PVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANG 226 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 9999999999999997 78899999999999999999999976421111111112334455566666778888888888
Q ss_pred HHHHHh
Q 020854 284 IWGVLS 289 (320)
Q Consensus 284 ~~~l~~ 289 (320)
+.||++
T Consensus 227 v~fL~s 232 (254)
T d2gdza1 227 LITLIE 232 (254)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 887765
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-42 Score=311.13 Aligned_cols=190 Identities=25% Similarity=0.383 Sum_probs=171.6
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhc---CCceEEEEEEeCCCC--cHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKY---AKTQIKSVVVDFSGD--LDEGVERIK 125 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~---~~~~~~~~~~D~~~~--~~~~~~~~~ 125 (320)
++||+||||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. .+.++..+++|++|. +++.++++.
T Consensus 10 L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~ 89 (297)
T d1yxma1 10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL 89 (297)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHH
Confidence 679999999999999999999999999999999999999999999997643 246799999999985 467777788
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCc
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
+.+++ +|+||||||.... .++.+.+.++|++++++|+.|+++++++++|.|.+++.|+||++||. +.. +.|+.
T Consensus 90 ~~~G~--iDiLVnnAg~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~-~~~--~~~~~ 162 (297)
T d1yxma1 90 DTFGK--INFLVNNGGGQFL--SPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVP-TKA--GFPLA 162 (297)
T ss_dssp HHHSC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCC-CTT--CCTTC
T ss_pred HHhCC--eEEEEeecccccc--CchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccc-ccc--ccccc
Confidence 88886 4599999998764 67899999999999999999999999999999999999999999774 444 57889
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
..|++||+|+.+|+++|+.|++++|||||+|+||+|+|+|..
T Consensus 163 ~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~ 204 (297)
T d1yxma1 163 VHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAV 204 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGG
T ss_pred ccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchh
Confidence 999999999999999999999999999999999999999864
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=2.1e-42 Score=302.72 Aligned_cols=222 Identities=16% Similarity=0.075 Sum_probs=190.1
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCC--CcHHHHHHHHHHHcCCC
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEAIEGLD 132 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 132 (320)
++||||||+|||+++|++|+++|++|++++|+.++++++.+.. ..+ .++|+++ ++++.++++.++++++|
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~-~~~-------~~~dv~~~~~~~~~~~~~~~~~G~iD 73 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFA-ETY-------PQLKPMSEQEPAELIEAVTSAYGQVD 73 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHH-HHC-------TTSEECCCCSHHHHHHHHHHHHSCCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhh-CcE-------EEeccCCHHHHHHHHHHHHHHcCCCC
Confidence 7999999999999999999999999999999988877764433 222 2466665 45788899999998755
Q ss_pred eEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHHHH
Q 020854 133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATK 212 (320)
Q Consensus 133 id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asK 212 (320)
+||||||...+ .+++++.+.++|++++++|+.++++++|+++|+|++++.|+||++||.++.. +.++..+|++||
T Consensus 74 --iLVnNAg~~~~-~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~--~~~~~~~Y~asK 148 (252)
T d1zmta1 74 --VLVSNDIFAPE-FQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFG--PWKELSTYTSAR 148 (252)
T ss_dssp --EEEEECCCCCC-CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTS--CCTTCHHHHHHH
T ss_pred --EEEECCcCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccccc--cccccccccccc
Confidence 99999997653 4678999999999999999999999999999999999999999999999988 788999999999
Q ss_pred HHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHHHh
Q 020854 213 AYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVLS 289 (320)
Q Consensus 213 aal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l~~ 289 (320)
+|+.+|+|+|+.|++++|||||+|+||+|+|+|.....+.......++..+.+.+.++.+|...|++++.++.||++
T Consensus 149 aal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S 225 (252)
T d1zmta1 149 AGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLAS 225 (252)
T ss_dssp HHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999987432221122334556777888888999999999999999876
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=2.5e-42 Score=298.96 Aligned_cols=211 Identities=23% Similarity=0.265 Sum_probs=183.8
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
++||++||||||+|||+++|++|+++|++|++++|+++.+++. + ..++.+|++++ ++.+.+++++
T Consensus 2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~---------~--~~~~~~Dv~~~----~~~~~~~~g~ 66 (234)
T d1o5ia_ 2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS---------G--HRYVVCDLRKD----LDLLFEKVKE 66 (234)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT---------C--SEEEECCTTTC----HHHHHHHSCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc---------C--CcEEEcchHHH----HHHHHHHhCC
Confidence 5799999999999999999999999999999999998765532 2 24567898865 4566777776
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHH
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA 210 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~a 210 (320)
+|+||||||.... .++.+.+.++|++++++|+.++++++|.++|.|++++.|+||+++|..+.. +.++...|++
T Consensus 67 --iD~lVnnAG~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~--~~~~~~~Y~a 140 (234)
T d1o5ia_ 67 --VDILVLNAGGPKA--GFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVIS--PIENLYTSNS 140 (234)
T ss_dssp --CSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CCTTBHHHHH
T ss_pred --CcEEEecccccCC--cchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccc--cccccccchh
Confidence 5599999998654 778999999999999999999999999999999999999999999999988 7889999999
Q ss_pred HHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHHHh
Q 020854 211 TKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVLS 289 (320)
Q Consensus 211 sKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l~~ 289 (320)
||+|+.+|+++|+.|++++|||||+|+||+++|++.... .+++..+.+.+.++.+|...|++++.++.||++
T Consensus 141 sKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~-------~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S 212 (234)
T d1o5ia_ 141 ARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKEL-------LSEEKKKQVESQIPMRRMAKPEEIASVVAFLCS 212 (234)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHH-------SCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhh-------cCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999997641 234556667777777888888888888888765
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=4.2e-42 Score=302.07 Aligned_cols=228 Identities=21% Similarity=0.261 Sum_probs=185.4
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHH---cCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAK---TGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA 127 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~---~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 127 (320)
++||++||||||+|||+++|++|++ +|++|++++|++++++++.+++.+.+++.++..++||+++. +.++++.+.
T Consensus 4 L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~--~~v~~l~~~ 81 (259)
T d1oaaa_ 4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTE--AGVQRLLSA 81 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSH--HHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCH--HHHHHHHHH
Confidence 6699999999999999999999986 79999999999999999999999988888999999999986 444444433
Q ss_pred H------cCCCeEEEEEccCCCCC-ccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC--CcEEEEEcCccccc
Q 020854 128 I------EGLDVGVLINNVGISYP-YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK--KGAIVNIGSGAAIV 198 (320)
Q Consensus 128 ~------~~~~id~lI~nAG~~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~--~g~Iv~vsS~~~~~ 198 (320)
+ ...++|++|||||...+ ..+++++.+.++|++++++|+.|++++++.++|+|++++ .|+||++||.++..
T Consensus 82 ~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~ 161 (259)
T d1oaaa_ 82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ 161 (259)
T ss_dssp HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred HHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC
Confidence 2 12368899999998653 245688999999999999999999999999999998775 58999999999998
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCC
Q 020854 199 IPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPY 278 (320)
Q Consensus 199 ~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~ 278 (320)
+.++++.|++||+|+.+|+++|+.| ++|||||+|+||+|+|+|....... ...++..+.+......++...|.
T Consensus 162 --~~~~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~~~~~~---~~~~~~~~~~~~~~~~~r~~~p~ 234 (259)
T d1oaaa_ 162 --PYKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLARET---SKDPELRSKLQKLKSDGALVDCG 234 (259)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHHHHHHH---CSCHHHHHHHHHHHHTTCSBCHH
T ss_pred --CCccchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHHHhhhc---CCCHHHHHHHHhcCCCCCCCCHH
Confidence 7899999999999999999999999 6799999999999999987531110 11223334444444455555666
Q ss_pred chHHHHHHH
Q 020854 279 WPHSFIWGV 287 (320)
Q Consensus 279 ~~~~~~~~l 287 (320)
+....+.++
T Consensus 235 evA~~i~~l 243 (259)
T d1oaaa_ 235 TSAQKLLGL 243 (259)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 655544444
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-41 Score=300.42 Aligned_cols=214 Identities=21% Similarity=0.252 Sum_probs=175.7
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEE---EeCCHHHHHHHHHHHHhh-cCCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVL---VGRNPDKLKDVSDSIQAK-YAKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil---~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
.|+|||||||+|||+++|++|+++|++|++ ++|+.+..+++.+..++. ..+.++..+++|++|. +.++++.+..
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~--~~~~~~~~~~ 79 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDS--KSVAAARERV 79 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCH--HHHHHHHHTC
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccch--Hhhhhhhhhc
Confidence 488999999999999999999999997554 556655544444433332 2356899999999987 6666666665
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhh
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY 208 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y 208 (320)
....+|+||||||.... .++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++.. +.|+.+.|
T Consensus 80 ~~g~idilvnnag~~~~--~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~--~~~~~~~Y 155 (285)
T d1jtva_ 80 TEGRVDVLVCNAGLGLL--GPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLM--GLPFNDVY 155 (285)
T ss_dssp TTSCCSEEEECCCCCCC--SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTS--CCTTCHHH
T ss_pred cccchhhhhhccccccc--ccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcC--CCCCchHH
Confidence 44467899999998775 678899999999999999999999999999999999999999999999998 78999999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccC----------------------------CCCCCCHHH
Q 020854 209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRS----------------------------SFFVPSTDV 260 (320)
Q Consensus 209 ~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~----------------------------~~~~~~~~~ 260 (320)
++||+|+.+|+++|+.|++++||+||+|+||+|+|+|.+.... .....+||+
T Consensus 156 ~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pee 235 (285)
T d1jtva_ 156 CASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEE 235 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHH
Confidence 9999999999999999999999999999999999999763111 012458999
Q ss_pred HHHHHHHHhCCC
Q 020854 261 YARAAMRWIGYE 272 (320)
Q Consensus 261 ~a~~i~~~l~~~ 272 (320)
+|+.++..+..+
T Consensus 236 VA~~v~~~~~~~ 247 (285)
T d1jtva_ 236 VAEVFLTALRAP 247 (285)
T ss_dssp HHHHHHHHHHCS
T ss_pred HHHHHHHHHhCC
Confidence 999999998765
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=100.00 E-value=2.4e-41 Score=297.22 Aligned_cols=230 Identities=21% Similarity=0.242 Sum_probs=199.3
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEe-CCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
|.||+||||||++|||+++|++|+++|++|++++ |+.+.++++.+++.+. +.+++.+++|++|. +++.++++.++
T Consensus 4 L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (259)
T d1ja9a_ 4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL--GAQGVAIQADISKPSEVVALFDKAVSH 81 (259)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHc--CCCceEecCCCCCHHHHHHHHHHHHHH
Confidence 6799999999999999999999999999999865 5667788888888775 45688999999984 46777888888
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
++. +|++|||||.... .++.+.+.++|++++++|+.++++++|.++|+|++ .|++++++|..+... +.+++..
T Consensus 82 ~g~--idilinnag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~g~~iii~s~~~~~~-~~~~~~~ 154 (259)
T d1ja9a_ 82 FGG--LDFVMSNSGMEVW--CDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR--GGRIILTSSIAAVMT-GIPNHAL 154 (259)
T ss_dssp HSC--EEEEECCCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE--EEEEEEECCGGGTCC-SCCSCHH
T ss_pred cCC--CcEEEeccccccc--cccccchHHHHHHHHhhccceeeeehhhhhhhhhc--CCccccccccccccc-CCCCchh
Confidence 875 7799999998764 77899999999999999999999999999999964 478888888777553 5789999
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc-----ccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHH
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI-----KRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHS 282 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~-----~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~ 282 (320)
|++||+|+.+|+++|+.|++++|||||+|+||+++|+|... ........++++..+.+.+..+.+|...|.++..
T Consensus 155 Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eVa~ 234 (259)
T d1ja9a_ 155 YAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGR 234 (259)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHHHHHH
Confidence 99999999999999999999999999999999999999763 1222334678888999999999999999999999
Q ss_pred HHHHHHh
Q 020854 283 FIWGVLS 289 (320)
Q Consensus 283 ~~~~l~~ 289 (320)
++.||++
T Consensus 235 ~v~fL~S 241 (259)
T d1ja9a_ 235 AVSALCQ 241 (259)
T ss_dssp HHHHHHS
T ss_pred HHHHHhC
Confidence 9999876
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=100.00 E-value=2.6e-41 Score=293.62 Aligned_cols=218 Identities=22% Similarity=0.222 Sum_probs=185.0
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||+|||||||+|||+++|++|+++|++|++++|+.+++++..+++ +.++..+++|+++. +++.++++.++
T Consensus 2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~i~~~~~~i~~~ 76 (241)
T d2a4ka1 2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVADVSDPKAVEAVFAEALEE 76 (241)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-----CSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 367999999999999999999999999999999999999887766554 45788999999974 36677777888
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
++++ |+||||||...+ .++.+.+.++|++++++|+.+++.++|.++|+|.+ .+.|+++||.+.. +.|++..
T Consensus 77 ~g~i--DiLinnAg~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~--~~~i~~~ss~a~~---~~~~~~~ 147 (241)
T d2a4ka1 77 FGRL--HGVAHFAGVAHS--ALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEE--GGSLVLTGSVAGL---GAFGLAH 147 (241)
T ss_dssp HSCC--CEEEEGGGGTTT--TC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCT--TCEEEEECCCTTC---CHHHHHH
T ss_pred hCCc--cEeccccccccc--cchhhhhcccccccccccccccccccccccccccc--ccceeeccccccc---cccCccc
Confidence 8865 599999998765 77899999999999999999999999999998854 4667777776554 3478899
Q ss_pred hHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHH
Q 020854 208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGV 287 (320)
Q Consensus 208 Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l 287 (320)
|+++|+|+++|+++|+.|++++|||||+|+||+++|+|... .+++..+...+..+.+|...|++++.++.||
T Consensus 148 Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~--------~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL 219 (241)
T d2a4ka1 148 YAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAG--------LPPWAWEQEVGASPLGRAGRPEEVAQAALFL 219 (241)
T ss_dssp HHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTT--------SCHHHHHHHHHTSTTCSCBCHHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHh--------hhHhHHHHHHhCCCCCCCcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998763 3466677778888888999999999999888
Q ss_pred Hh
Q 020854 288 LS 289 (320)
Q Consensus 288 ~~ 289 (320)
++
T Consensus 220 ~S 221 (241)
T d2a4ka1 220 LS 221 (241)
T ss_dssp HS
T ss_pred hc
Confidence 76
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-41 Score=294.59 Aligned_cols=223 Identities=21% Similarity=0.265 Sum_probs=193.3
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
++||++||||||+|||+++|++|+++|++|++++|+++++++..+ ...+....+|+.+. +.++...+.++.
T Consensus 4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~-------~~~~~~~~~d~~~~--~~~~~~~~~~~~ 74 (245)
T d2ag5a1 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK-------YPGIQTRVLDVTKK--KQIDQFANEVER 74 (245)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG-------STTEEEEECCTTCH--HHHHHHHHHCSC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-------ccCCceeeeecccc--cccccccccccc
Confidence 679999999999999999999999999999999999988766533 23356667776644 777888888876
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHH
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA 210 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~a 210 (320)
+|+||||||...+ .++.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+... +.++..+|++
T Consensus 75 --id~lVn~ag~~~~--~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~-~~~~~~~Y~~ 149 (245)
T d2ag5a1 75 --LDVLFNVAGFVHH--GTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVK-GVVNRCVYST 149 (245)
T ss_dssp --CSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTB-CCTTBHHHHH
T ss_pred --ceeEEecccccCC--CChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccC-CccchhHHHH
Confidence 4599999998765 6789999999999999999999999999999999999999999999888542 5788999999
Q ss_pred HHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHHHh
Q 020854 211 TKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVLS 289 (320)
Q Consensus 211 sKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l~~ 289 (320)
||+|+.+|+|+|+.|++++|||||+|+||+|+||+...... ....+++..+.+.+..+.+|...|+++..++.||++
T Consensus 150 sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~--~~~~~~~~~~~~~~~~pl~R~~~pedva~~v~fL~s 226 (245)
T d2ag5a1 150 TKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQ--ARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLAS 226 (245)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHH--HSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhh--hhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999763111 124677888888888888999999999999999876
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.7e-41 Score=302.57 Aligned_cols=210 Identities=22% Similarity=0.285 Sum_probs=179.3
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCC---------HHHHHHHHHHHHhhcCCceEEEEEEeCCC--Cc
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN---------PDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DL 117 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~---------~~~~~~~~~~l~~~~~~~~~~~~~~D~~~--~~ 117 (320)
++++||++|||||++|||+++|++|+++|++|++++|+ .+.+++..+++... .....+|+.| +.
T Consensus 3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~d~~~~~~~ 77 (302)
T d1gz6a_ 3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR-----GGKAVANYDSVEAG 77 (302)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT-----TCEEEEECCCGGGH
T ss_pred cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhc-----ccccccccchHHHH
Confidence 45779999999999999999999999999999998764 45677777777553 2345567765 34
Q ss_pred HHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccc
Q 020854 118 DEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAI 197 (320)
Q Consensus 118 ~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~ 197 (320)
++.++.+.++++++| +||||||+..+ +++.+.+.++|++++++|+.|+++++|.++|+|++++.|+||++||.++.
T Consensus 78 ~~~v~~~~~~~G~iD--iLVnNAGi~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~ 153 (302)
T d1gz6a_ 78 EKLVKTALDTFGRID--VVVNNAGILRD--RSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGI 153 (302)
T ss_dssp HHHHHHHHHHTSCCC--EEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred HHHHHHHHHHcCCCC--EEEECCccCCC--CChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhc
Confidence 677888888888654 99999999875 78999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcccc-CCCCCCCHHHHHHHHHHHh
Q 020854 198 VIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKR-SSFFVPSTDVYARAAMRWI 269 (320)
Q Consensus 198 ~~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~~a~~i~~~l 269 (320)
. +.++.+.|++||+|+.+|+++|+.|++++||+||+|+||++.|++..... +.....+||++|..++...
T Consensus 154 ~--~~~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~~~~~~~~~PedvA~~v~fL~ 224 (302)
T d1gz6a_ 154 Y--GNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMPEDLVEALKPEYVAPLVLWLC 224 (302)
T ss_dssp H--CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSCHHHHHHSCGGGTHHHHHHHT
T ss_pred C--CCCCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCcHhhHhcCCHHHHHHHHHHHc
Confidence 8 78999999999999999999999999999999999999999998866421 1122457888888887654
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.8e-40 Score=291.17 Aligned_cols=227 Identities=20% Similarity=0.163 Sum_probs=185.7
Q ss_pred ccccCCCEEEEECCCC--cHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHH
Q 020854 48 NLRKYGSWALVTGPTD--GIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVER 123 (320)
Q Consensus 48 ~~~~~gk~vlITGas~--GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~ 123 (320)
.++++||++||||||| |||+++|++|+++|++|++++|+++..++. +++... ......+++|++|. +++.+++
T Consensus 3 ~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~ 79 (256)
T d1ulua_ 3 TVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEA-EKLAEA--LGGALLFRADVTQDEELDALFAG 79 (256)
T ss_dssp EECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHHHH--TTCCEEEECCTTCHHHHHHHHHH
T ss_pred CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHH-HHhhhc--cCcccccccccCCHHHHHHHHHH
Confidence 4578899999999987 999999999999999999999997655544 344333 33467789999984 3567777
Q ss_pred HHHHHcCCCeEEEEEccCCCCC--ccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCC
Q 020854 124 IKEAIEGLDVGVLINNVGISYP--YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS 201 (320)
Q Consensus 124 ~~~~~~~~~id~lI~nAG~~~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~ 201 (320)
+.+++++ +|+||||||.... ...++.+.+.++|+..+++|+.+++.+++.+.|+|++ +|+||++||.++.. +
T Consensus 80 ~~~~~g~--iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~Iv~isS~~~~~--~ 153 (256)
T d1ulua_ 80 VKEAFGG--LDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEK--V 153 (256)
T ss_dssp HHHHHSS--EEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTS--B
T ss_pred HHHhcCC--ceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc--CCEEEEEeehHhcC--C
Confidence 7777875 7799999998653 1235678899999999999999999999999999854 59999999999988 7
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchH
Q 020854 202 DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPH 281 (320)
Q Consensus 202 ~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~ 281 (320)
.|+..+|++||+|+.+|+++|+.|++++|||||+|+||+++|++... ....++..+.+.+.++.+|...|++++
T Consensus 154 ~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~------~~~~~~~~~~~~~~~pl~R~~~pedvA 227 (256)
T d1ulua_ 154 VPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARS------IPGFTKMYDRVAQTAPLRRNITQEEVG 227 (256)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------CHHHHHHHHHHSTTSSCCCHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccc------hhhhHHHHHHHHhcCCCCCCcCHHHHH
Confidence 88999999999999999999999999999999999999999998764 123466777888888888999999999
Q ss_pred HHHHHHHh
Q 020854 282 SFIWGVLS 289 (320)
Q Consensus 282 ~~~~~l~~ 289 (320)
.++.||++
T Consensus 228 ~~v~fL~S 235 (256)
T d1ulua_ 228 NLGLFLLS 235 (256)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHhC
Confidence 99888876
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=100.00 E-value=1.2e-40 Score=291.49 Aligned_cols=208 Identities=22% Similarity=0.222 Sum_probs=174.7
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC---cHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD---LDEGVERIK 125 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~---~~~~~~~~~ 125 (320)
++++||+|||||||+|||+++|++|+++|++|++++|+.++.++. +++....++.++.++.+|++++ +++.++++.
T Consensus 1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 79 (254)
T d1sbya1 1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTAL-AELKAINPKVNITFHTYDVTVPVAESKKLLKKIF 79 (254)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHH-HHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHH-HHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHH
Confidence 457799999999999999999999999999999999887775544 5566666678999999999843 356678888
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC---CcEEEEEcCccccccCCC
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK---KGAIVNIGSGAAIVIPSD 202 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~---~g~Iv~vsS~~~~~~~~~ 202 (320)
+++++ +|+||||||.. +.+.|++++++|++|++++++.++|.|.+++ .|+||++||.++.. +.
T Consensus 80 ~~~g~--iDilvnnAG~~----------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~--~~ 145 (254)
T d1sbya1 80 DQLKT--VDILINGAGIL----------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN--AI 145 (254)
T ss_dssp HHHSC--CCEEEECCCCC----------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS--CC
T ss_pred HHcCC--CCEEEeCCCCC----------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhcc--CC
Confidence 88885 55999999964 3455899999999999999999999997653 58999999999998 78
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcccc-------------CCCCCCCHHHHHHHHHHHh
Q 020854 203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKR-------------SSFFVPSTDVYARAAMRWI 269 (320)
Q Consensus 203 ~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~-------------~~~~~~~~~~~a~~i~~~l 269 (320)
+++.+|++||+|+.+|+++|+.|++++|||||+|+||+|+|||.+... ......+||++|+.++..+
T Consensus 146 ~~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~~~ 225 (254)
T d1sbya1 146 HQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAI 225 (254)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhccccCCCCCHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999854211 1122447888888887766
Q ss_pred CC
Q 020854 270 GY 271 (320)
Q Consensus 270 ~~ 271 (320)
..
T Consensus 226 ~~ 227 (254)
T d1sbya1 226 EA 227 (254)
T ss_dssp HH
T ss_pred hC
Confidence 43
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=100.00 E-value=1.1e-39 Score=288.62 Aligned_cols=233 Identities=19% Similarity=0.244 Sum_probs=194.5
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCC-HHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-PDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERI 124 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~ 124 (320)
..+++||++||||||+|||+++|++|+++|++|++++|+ .+.++++.+++++. +.++..+++|++|. +++.++++
T Consensus 13 ~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~~~v~~~~~~~ 90 (272)
T d1g0oa_ 13 SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN--GSDAACVKANVGVVEDIVRMFEEA 90 (272)
T ss_dssp GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhh--CCceeeEeCCCCCHHHHHHHHHHH
Confidence 345889999999999999999999999999999999876 56678888888775 45789999999984 46777888
Q ss_pred HHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCC
Q 020854 125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL 204 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~ 204 (320)
.+.++.+ |++|||+|.... .++.+.+.++|++++++|+.+++++++.+.|+|.+ .|++++++|..+... +.++
T Consensus 91 ~~~~g~i--dilV~nag~~~~--~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~--~g~~i~i~s~~~~~~-~~~~ 163 (272)
T d1g0oa_ 91 VKIFGKL--DIVCSNSGVVSF--GHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI--GGRLILMGSITGQAK-AVPK 163 (272)
T ss_dssp HHHHSCC--CEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT--TCEEEEECCGGGTCS-SCSS
T ss_pred HHHhCCC--Cccccccccchh--hhhhhhhhhHHHHHhhhccceeeeecccccccccc--ccccccccccccccc-cccc
Confidence 8888865 599999998765 67899999999999999999999999999999964 588999999887653 4677
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccc----cCCCCCCCHHHHHH-HHHHHhCCCCcccCCc
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIK----RSSFFVPSTDVYAR-AAMRWIGYEPCCTPYW 279 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~----~~~~~~~~~~~~a~-~i~~~l~~~~~~~~~~ 279 (320)
.+.|++||+|+.+|+++|+.|++++|||||+|+||+|+|+|.... ........+++..+ ...+.++.+|...|++
T Consensus 164 ~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~pee 243 (272)
T d1g0oa_ 164 HAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPID 243 (272)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHH
Confidence 889999999999999999999999999999999999999986531 11112233444333 4556677789999999
Q ss_pred hHHHHHHHHh
Q 020854 280 PHSFIWGVLS 289 (320)
Q Consensus 280 ~~~~~~~l~~ 289 (320)
++.++.||++
T Consensus 244 vA~~v~fL~s 253 (272)
T d1g0oa_ 244 IARVVCFLAS 253 (272)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHHhC
Confidence 9999998876
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-39 Score=282.46 Aligned_cols=223 Identities=18% Similarity=0.194 Sum_probs=180.5
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
+++||++||||||+|||+++|++|+++|++|++++|+.+++++..+++ +.......+|+.+. +++..+.+...
T Consensus 2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (248)
T d2o23a1 2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----GNNCVFAPADVTSEKDVQTALALAKGK 76 (248)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCCcccccccccccccccccccccccc
Confidence 467999999999999999999999999999999999999999888877 45677888888874 24555666666
Q ss_pred HcCCCeEEEEEccCCCCCc----cccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC------CCcEEEEEcCcccc
Q 020854 128 IEGLDVGVLINNVGISYPY----ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR------KKGAIVNIGSGAAI 197 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~----~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~------~~g~Iv~vsS~~~~ 197 (320)
....+ .+++|++..... ..++.+.+.++|++++++|+.+++++++++.|+|..+ +.|+||++||..+.
T Consensus 77 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~ 154 (248)
T d2o23a1 77 FGRVD--VAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAF 154 (248)
T ss_dssp HSCCC--EEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHH
T ss_pred ccccc--ccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhc
Confidence 66545 888888765431 2456778899999999999999999999999998654 56899999999999
Q ss_pred ccCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCC-CCccc
Q 020854 198 VIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGY-EPCCT 276 (320)
Q Consensus 198 ~~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~-~~~~~ 276 (320)
. +.|+.++|++||+|+.+|+++|+.|++++|||||+|+||+++|+|... .+++..+.+.+.++. +|...
T Consensus 155 ~--~~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~--------~~~~~~~~~~~~~pl~~R~g~ 224 (248)
T d2o23a1 155 E--GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS--------LPEKVCNFLASQVPFPSRLGD 224 (248)
T ss_dssp H--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC------------------CHHHHTCSSSCSCBC
T ss_pred c--CCCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhc--------CCHHHHHHHHhcCCCCCCCcC
Confidence 8 789999999999999999999999999999999999999999999764 244555666666664 57778
Q ss_pred CCchHHHHHHHHh
Q 020854 277 PYWPHSFIWGVLS 289 (320)
Q Consensus 277 ~~~~~~~~~~l~~ 289 (320)
|++++.++.||++
T Consensus 225 peevA~~v~fL~s 237 (248)
T d2o23a1 225 PAEYAHLVQAIIE 237 (248)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 8888887777654
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=100.00 E-value=3.8e-39 Score=281.36 Aligned_cols=210 Identities=21% Similarity=0.247 Sum_probs=170.6
Q ss_pred CCEEEEECCCCcHHHHHHHHHH---HcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLA---KTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~---~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
.|+|||||||+|||+++|++|+ ++|++|++++|++++++++.+.. +. ..++..+.+|++|. +++.++.+.+.
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~-~~--~~~~~~~~~Dvs~~~~v~~~~~~i~~~ 78 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLA-KN--HSNIHILEIDLRNFDAYDKLVADIEGV 78 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHH-HH--CTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHH-hc--CCcEEEEEEEeccHHHHHHHHhhhHHH
Confidence 5899999999999999999996 57999999999999988765433 33 45788999999985 24555555433
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC-----------CCcEEEEEcCccc
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-----------KKGAIVNIGSGAA 196 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-----------~~g~Iv~vsS~~~ 196 (320)
....++|+||||||+... ..++.+.+.++|++++++|+.|++.+++.++|+|+++ +.|+||+++|.++
T Consensus 79 ~~~~~iDiLvnNAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g 157 (248)
T d1snya_ 79 TKDQGLNVLFNNAGIAPK-SARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG 157 (248)
T ss_dssp HGGGCCSEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGG
T ss_pred hhcCCcceEEeecccccc-CcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccccccc
Confidence 222346699999998664 3567889999999999999999999999999999864 4689999999998
Q ss_pred ccc-CCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhC
Q 020854 197 IVI-PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIG 270 (320)
Q Consensus 197 ~~~-~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~ 270 (320)
... ++.++..+|++||+|+.+|+++++.|++++||+|++|+||+|+|+|.....+ .++++.++.++..+.
T Consensus 158 ~~~~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~~~----~~~~~~~~~i~~~i~ 228 (248)
T d1snya_ 158 SIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAP----LDVPTSTGQIVQTIS 228 (248)
T ss_dssp CSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTCS----BCHHHHHHHHHHHHH
T ss_pred ccCCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccccCC----CCchHHHHHHHHHHH
Confidence 652 2456788999999999999999999999999999999999999999875322 355666666665553
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=100.00 E-value=2.3e-38 Score=283.06 Aligned_cols=229 Identities=21% Similarity=0.221 Sum_probs=185.1
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
.+++||++||||||+|||+++|++|+++|++|++++|+.+++++..+++.+.+ +..+..+.+|+++. ++..++.+.+
T Consensus 21 ~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~-g~~~~~~~~D~~~~~~v~~~~~~~~~ 99 (294)
T d1w6ua_ 21 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVRDPDMVQNTVSELIK 99 (294)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhc-CCceEEEEecccChHHHHHHhhhhhh
Confidence 36889999999999999999999999999999999999999999999987766 56788999999985 2455566666
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhc-CCCcEEEEEcCccccccCCCCCc
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK-RKKGAIVNIGSGAAIVIPSDPLY 205 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~-~~~g~Iv~vsS~~~~~~~~~~~~ 205 (320)
.+++ +|+||||||.... .++.+.+.+++++++.+|+.+.+.+.+...+.+.. +..+.+++++|.++.. +.++.
T Consensus 100 ~~g~--iDilvnnAg~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~--~~~~~ 173 (294)
T d1w6ua_ 100 VAGH--PNIVINNAAGNFI--SPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAET--GSGFV 173 (294)
T ss_dssp HTCS--CSEEEECCCCCCC--SCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHH--CCTTC
T ss_pred hccc--cchhhhhhhhccc--cccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhh--ccccc
Confidence 6665 5599999998765 67889999999999999999999998888776664 4567889999998888 67889
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHH
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIW 285 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~ 285 (320)
.+|++||+|+.+|+++|+.|++++|||||+|+||+|+|++..... ...++..+...+.++.+|...|++++.++.
T Consensus 174 ~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~-----~~~~~~~~~~~~~~pl~R~~~pediA~~v~ 248 (294)
T d1w6ua_ 174 VPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRL-----DPTGTFEKEMIGRIPCGRLGTVEELANLAA 248 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------C-----CTTSHHHHHHHTTCTTSSCBCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhcc-----CCcHHHHHHHhhcCCCCCCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999975311 122334455555556666666666666666
Q ss_pred HHHh
Q 020854 286 GVLS 289 (320)
Q Consensus 286 ~l~~ 289 (320)
||++
T Consensus 249 fL~s 252 (294)
T d1w6ua_ 249 FLCS 252 (294)
T ss_dssp HHTS
T ss_pred HHhC
Confidence 6554
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=6.3e-39 Score=280.25 Aligned_cols=211 Identities=21% Similarity=0.300 Sum_probs=167.8
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA 127 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~ 127 (320)
..|+|||||||+|||+++|++|+++|+ +|++++|+.++++++.+ .. +.+++.+++|++|. +++.++++.+.
T Consensus 2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~----~~-~~~~~~~~~Dvs~~~~v~~~~~~i~~~ 76 (250)
T d1yo6a1 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS----IK-DSRVHVLPLTVTCDKSLDTFVSKVGEI 76 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT----CC-CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHH----hh-CCceEEEEEecCCHHHHHHHHHHHHHH
Confidence 369999999999999999999999996 68999999988776543 22 55789999999984 36667777777
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC-----------CCcEEEEEcCccc
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-----------KKGAIVNIGSGAA 196 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-----------~~g~Iv~vsS~~~ 196 (320)
++..++|+||||||+..+ ..++.+.+.++|++++++|+.|++++++.++|+|+++ ..+++++++|..+
T Consensus 77 ~~~~~idilinnAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~ 155 (250)
T d1yo6a1 77 VGSDGLSLLINNAGVLLS-YGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG 155 (250)
T ss_dssp HGGGCCCEEEECCCCCCC-BCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGG
T ss_pred hCCCCeEEEEEcCcccCC-CCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccc
Confidence 777668899999998764 3567889999999999999999999999999999754 2478999999877
Q ss_pred cccC-----CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCC
Q 020854 197 IVIP-----SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 197 ~~~~-----~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~ 271 (320)
.... +..+..+|++||+|+.+|+++|+.|+++.||+|++|+||+|+|+|.... ...+||+.++.++..+..
T Consensus 156 ~~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~----~~~~~e~~a~~~~~~~~~ 231 (250)
T d1yo6a1 156 SITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKN----AALTVEQSTAELISSFNK 231 (250)
T ss_dssp CSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----------------HHHHHHHHHHHTT
T ss_pred cccCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCC----CCCCHHHHHHHHHHHHhc
Confidence 6521 1223467999999999999999999999999999999999999997642 246899999999999876
Q ss_pred C
Q 020854 272 E 272 (320)
Q Consensus 272 ~ 272 (320)
.
T Consensus 232 ~ 232 (250)
T d1yo6a1 232 L 232 (250)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.9e-39 Score=284.30 Aligned_cols=205 Identities=23% Similarity=0.228 Sum_probs=173.5
Q ss_pred CEEEEECCCCcHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHcC
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKT-GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEG 130 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~-G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~ 130 (320)
+++|||||++|||+++|++|+++ |++|++++|+.+++++..+++++.+ .++.+++||++|. ++++++++.+++++
T Consensus 4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~ 81 (275)
T d1wmaa1 4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG--LSPRFHQLDIDDLQSIRALRDFLRKEYGG 81 (275)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence 56699999999999999999986 8999999999999999999998874 4577889999984 46777888888875
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccccc-----------
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI----------- 199 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~----------- 199 (320)
+|+||||||+..+ .+..+.+.++|+.++++|++|++++++.++|+|++ .|+||++||.++...
T Consensus 82 --iDiLVnNAGi~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~--~g~ivnisS~~~~~~~~~~~~y~~~k 155 (275)
T d1wmaa1 82 --LDVLVNNAGIAFK--VADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQK 155 (275)
T ss_dssp --EEEEEECCCCCCC--TTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHHHH
T ss_pred --cEEEEEcCCcCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcccccccceeccccccchhhhhh
Confidence 7799999999765 56677888999999999999999999999999964 599999999876431
Q ss_pred ----------------------------CCCCCchhhHHHHHHHHHHHHHHHHHHcc----CCceEEEEeccceecCCCc
Q 020854 200 ----------------------------PSDPLYSVYAATKAYIDQFSRSLYVEYRK----SGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 200 ----------------------------~~~~~~~~Y~asKaal~~~~~~l~~el~~----~gi~v~~v~PG~v~T~~~~ 247 (320)
.......+|++||+++.+|++.++.||++ .||+||+|+||+|+|+|..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~ 235 (275)
T d1wmaa1 156 FRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAG 235 (275)
T ss_dssp HHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTC
T ss_pred hcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCccc
Confidence 01122457999999999999999999975 5999999999999999986
Q ss_pred cccCCCCCCCHHHHHHHHHHHhC
Q 020854 248 IKRSSFFVPSTDVYARAAMRWIG 270 (320)
Q Consensus 248 ~~~~~~~~~~~~~~a~~i~~~l~ 270 (320)
. ....+||+.|+.++....
T Consensus 236 ~----~~~~~pee~A~~~~~~a~ 254 (275)
T d1wmaa1 236 P----KATKSPEEGAETPVYLAL 254 (275)
T ss_dssp T----TCSBCHHHHTHHHHHHHS
T ss_pred C----cccCCHHHHHHHHHHHHc
Confidence 4 234589999998887653
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=8.8e-38 Score=270.60 Aligned_cols=204 Identities=14% Similarity=0.068 Sum_probs=167.2
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHHHHc
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIE 129 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~ 129 (320)
+||+|||||||+|||+++|++|+++|++|++++++..+. ........+|..+. .+...+.+.+.++
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE------------ASASVIVKMTDSFTEQADQVTAEVGKLLG 68 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT------------SSEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccccceeecccCcHHHHHHHHHHHHHHhC
Confidence 489999999999999999999999999999999876531 22334445555432 2344555556666
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhH
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA 209 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~ 209 (320)
..++|+||||||.... ..++.+.+.++|++++++|+.+++.+++.++|+|++ .|+||++||.++.. +.++..+|+
T Consensus 69 ~~~iD~lInnAG~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~--~~~~~~~Y~ 143 (236)
T d1dhra_ 69 DQKVDAILCVAGGWAG-GNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALD--GTPGMIGYG 143 (236)
T ss_dssp TCCEEEEEECCCCCCC-BCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGS--CCTTBHHHH
T ss_pred CCCceEEEECCccccc-ccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc--ccceeEEccHHHcC--CccCCcccH
Confidence 6679999999997543 345667778999999999999999999999999954 59999999999988 789999999
Q ss_pred HHHHHHHHHHHHHHHHHc--cCCceEEEEeccceecCCCcccc---CCCCCCCHHHHHHHHHHHhCCC
Q 020854 210 ATKAYIDQFSRSLYVEYR--KSGIDVQCQVPLYVATKMASIKR---SSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 210 asKaal~~~~~~l~~el~--~~gi~v~~v~PG~v~T~~~~~~~---~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
+||+|+.+|+++|+.|++ ++||+||+|+||+++|||.+... +...+.+||++|+.+...+...
T Consensus 144 asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~pe~va~~~~~l~s~~ 211 (236)
T d1dhra_ 144 MAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEADFSSWTPLEFLVETFHDWITGN 211 (236)
T ss_dssp HHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTSCGGGSEEHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCccchhhcCCCHHHHHHHHHHHhCCC
Confidence 999999999999999998 57999999999999999976422 2234678999999999887654
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=1.8e-36 Score=262.18 Aligned_cols=203 Identities=14% Similarity=0.094 Sum_probs=162.4
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCC--CcHHHHHHHHHHHcC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEAIEG 130 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 130 (320)
++.|||||||+|||+++|++|+++|++|++++|++++. ........+|..+ +.....+.+.+.+..
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ------------ADSNILVDGNKNWTEQEQSILEQTASSLQG 69 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT------------SSEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc------------ccccceeccccCchhHHHHHHHHHHHHhcC
Confidence 34579999999999999999999999999999987531 1223334444443 223344555565555
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHH
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA 210 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~a 210 (320)
.++|+||||||.... ..++.+.+.+.|+.++++|+.+++.+++.++|+|++ .|+||++||.++.. +.++..+|++
T Consensus 70 g~iD~linnAG~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~g~Iv~isS~~~~~--~~~~~~~Y~a 144 (235)
T d1ooea_ 70 SQVDGVFCVAGGWAG-GSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMG--PTPSMIGYGM 144 (235)
T ss_dssp CCEEEEEECCCCCCC-BCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGS--CCTTBHHHHH
T ss_pred CCeeEEEECCccccc-ccccccCcHHHHhhHhhhHHHHHHHHhhhccccccc--ceEEEEeccHHhcC--CcccccchHH
Confidence 578999999997653 234556667889999999999999999999999964 59999999999988 7899999999
Q ss_pred HHHHHHHHHHHHHHHHc--cCCceEEEEeccceecCCCccc---cCCCCCCCHHHHHHHHHHHhCCC
Q 020854 211 TKAYIDQFSRSLYVEYR--KSGIDVQCQVPLYVATKMASIK---RSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 211 sKaal~~~~~~l~~el~--~~gi~v~~v~PG~v~T~~~~~~---~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
||+|+.+|+++|+.|++ +.||+|++|+||+++|+|.+.. .+...+.+|+++++.++.++..+
T Consensus 145 sKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~ 211 (235)
T d1ooea_ 145 AKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPNADHSSWTPLSFISEHLLKWTTET 211 (235)
T ss_dssp HHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTTCCGGGCBCHHHHHHHHHHHHHCG
T ss_pred HHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCcCCccccCCCHHHHHHHHHHHhcCc
Confidence 99999999999999998 5789999999999999997642 22234678999999998877543
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.4e-34 Score=253.43 Aligned_cols=224 Identities=15% Similarity=0.076 Sum_probs=180.6
Q ss_pred cCCCEEEEECCCC--cHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCc--HHHHHHHHH
Q 020854 51 KYGSWALVTGPTD--GIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDL--DEGVERIKE 126 (320)
Q Consensus 51 ~~gk~vlITGas~--GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~--~~~~~~~~~ 126 (320)
++||++|||||+| |||+++|+.|+++|++|++++|+++..+.. +++... .......+.|+++.. .+.++++.+
T Consensus 3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (258)
T d1qsga_ 3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV-EEFAAQ--LGSDIVLQCDVAEDASIDTMFAELGK 79 (258)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHH-HHHHHH--TTCCCEEECCTTCHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHhh--cCCcceeecccchHHHHHHHHHHhhh
Confidence 6799999999998 899999999999999999999996654444 444443 334566777877641 223333333
Q ss_pred HHcCCCeEEEEEccCCCCCcc---ccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCC
Q 020854 127 AIEGLDVGVLINNVGISYPYA---RFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP 203 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~---~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~ 203 (320)
.++ .+|++||||+...... ...++...+.+...+++|+.+.+.+++.+.|.+. +++.||++||..+.. +.|
T Consensus 80 ~~~--~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Ii~iss~~~~~--~~~ 153 (258)
T d1qsga_ 80 VWP--KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN--PGSALLTLSYLGAER--AIP 153 (258)
T ss_dssp TCS--SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEE--EEEEEEEEECGGGTS--BCT
T ss_pred ccc--ccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCcEEEEecchhhcc--CCC
Confidence 333 5779999998865311 1234567788999999999999999999999884 457899999999988 678
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHH
Q 020854 204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSF 283 (320)
Q Consensus 204 ~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~ 283 (320)
+...|++||+|+.+|+++++.|++++|||||+|+||+|+|++... ....+...+.+.+.++.+|...|++...+
T Consensus 154 ~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~------~~~~~~~~~~~~~~~pl~R~~~peeia~~ 227 (258)
T d1qsga_ 154 NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASG------IKDFRKMLAHCEAVTPIRRTVTIEDVGNS 227 (258)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGG------STTHHHHHHHHHHHSTTSSCCCHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccc------cchhhhHHHHHHhCCCCCCCcCHHHHHHH
Confidence 899999999999999999999999999999999999999999764 24567777888888888899999999998
Q ss_pred HHHHHh
Q 020854 284 IWGVLS 289 (320)
Q Consensus 284 ~~~l~~ 289 (320)
+.||++
T Consensus 228 v~fL~s 233 (258)
T d1qsga_ 228 AAFLCS 233 (258)
T ss_dssp HHHHTS
T ss_pred HHHHhC
Confidence 888875
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=3.3e-34 Score=259.75 Aligned_cols=233 Identities=12% Similarity=0.056 Sum_probs=182.7
Q ss_pred CCCEEEEEC--CCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcC----------CceEEEEEEeC------
Q 020854 52 YGSWALVTG--PTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYA----------KTQIKSVVVDF------ 113 (320)
Q Consensus 52 ~gk~vlITG--as~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~----------~~~~~~~~~D~------ 113 (320)
.+|++|||| +|+|||+++|+.|+++|++|++++++............+... ........+|+
T Consensus 1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (329)
T d1uh5a_ 1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN 80 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence 379999999 668999999999999999999999987765544443322211 11223344443
Q ss_pred --------------CC--CcHHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHh
Q 020854 114 --------------SG--DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVL 177 (320)
Q Consensus 114 --------------~~--~~~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 177 (320)
++ .++..++.+.+.+++ +|+||||||...+..+++.+.+.++|++++++|+++++.++|.++
T Consensus 81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~--iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~ 158 (329)
T d1uh5a_ 81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGK--INMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFV 158 (329)
T ss_dssp GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCC--EEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCC--CCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHH
Confidence 33 346778888888885 669999999876544678899999999999999999999999999
Q ss_pred HhhhcCCCcEEEEEcCccccccCCCCC-chhhHHHHHHHHHHHHHHHHHHcc-CCceEEEEeccceecCCCcc-------
Q 020854 178 PGMLKRKKGAIVNIGSGAAIVIPSDPL-YSVYAATKAYIDQFSRSLYVEYRK-SGIDVQCQVPLYVATKMASI------- 248 (320)
Q Consensus 178 ~~l~~~~~g~Iv~vsS~~~~~~~~~~~-~~~Y~asKaal~~~~~~l~~el~~-~gi~v~~v~PG~v~T~~~~~------- 248 (320)
|+|.+ .|+||++||.++.. +.|+ ...|++||+|+++|+++|+.||++ +|||||+|+||+|+|++...
T Consensus 159 ~~m~~--~GsIv~iss~~~~~--~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~ 234 (329)
T d1uh5a_ 159 NIMKP--QSSIISLTYHASQK--VVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNT 234 (329)
T ss_dssp GGEEE--EEEEEEEECGGGTS--CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC-----
T ss_pred hhccc--ccccccceeehhcc--cccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhhh
Confidence 99953 59999999999988 6676 467999999999999999999986 69999999999999954321
Q ss_pred ------------------------------ccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHHHhh
Q 020854 249 ------------------------------KRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVLSI 290 (320)
Q Consensus 249 ------------------------------~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l~~~ 290 (320)
..........++..+...+..+.+|..+|++++.++.||++-
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA~~v~fLaSd 306 (329)
T d1uh5a_ 235 YENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSR 306 (329)
T ss_dssp -------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSG
T ss_pred hhhhhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCc
Confidence 011122345677778888888899999999999999988763
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=100.00 E-value=8.4e-34 Score=251.71 Aligned_cols=219 Identities=18% Similarity=0.129 Sum_probs=167.5
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeC-CHHHHHHHHHHHHhhcCCceEEEEEEe-----------------CCC
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVD-----------------FSG 115 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D-----------------~~~ 115 (320)
.++|||||++|||+++|++|+++|++|+++++ +.++.+++.+++.+.++ .....+++| +++
T Consensus 3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~dv~~ 81 (284)
T d1e7wa_ 3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP-NSAITVQADLSNVATAPVSGADGSAPVTL 81 (284)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcC-CceEEEEeecccccccccccccccccCCC
Confidence 58999999999999999999999999999775 56778888888887664 345555555 443
Q ss_pred --CcHHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHH--------------HHHHHHHhHHHHHHHHHHhHh
Q 020854 116 --DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLL--------------KNLIKVNVEGTTKVTQAVLPG 179 (320)
Q Consensus 116 --~~~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~--------------~~~~~~N~~g~~~l~~~~~~~ 179 (320)
++++.++++.++++++| +||||||...+ .++.+.+.+++ ..++.+|+.+++++++.+.+.
T Consensus 82 ~~~v~~~~~~~~~~~G~iD--iLVnnAG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 157 (284)
T d1e7wa_ 82 FTRCAELVAACYTHWGRCD--VLVNNASSFYP--TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR 157 (284)
T ss_dssp HHHHHHHHHHHHHHHSCCC--EEEECCCCCCC--CCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCC--EEEecCCccCC--CchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccch
Confidence 23566777778888644 99999998765 45555555444 358899999999999998876
Q ss_pred h------hcCCCcEEEEEcCccccccCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCC
Q 020854 180 M------LKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSF 253 (320)
Q Consensus 180 l------~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~ 253 (320)
+ .+...++|++++|..+.. +.++..+|++||+|+.+|+++|+.|++++|||||+|+||++.+...
T Consensus 158 ~~~~~~~~~~~~~~ii~~~s~~~~~--~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~------- 228 (284)
T d1e7wa_ 158 VAGTPAKHRGTNYSIINMVDAMTNQ--PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDD------- 228 (284)
T ss_dssp HHTSCGGGSCSCEEEEEECCTTTTS--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGG-------
T ss_pred hhhhHHHhcCCCCcccccccccccC--CccceeeeccccccchhhhHHHHHHhCCcccccccccccccccccc-------
Confidence 4 334568999999999988 7889999999999999999999999999999999999998554322
Q ss_pred CCCCHHHHHHHHHHHhCC-CCcccCCchHHHHHHHHh
Q 020854 254 FVPSTDVYARAAMRWIGY-EPCCTPYWPHSFIWGVLS 289 (320)
Q Consensus 254 ~~~~~~~~a~~i~~~l~~-~~~~~~~~~~~~~~~l~~ 289 (320)
.+++..+.....++. +|...|++++.++.||++
T Consensus 229 ---~~~~~~~~~~~~~pl~~R~~~peeiA~~v~fL~S 262 (284)
T d1e7wa_ 229 ---MPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCS 262 (284)
T ss_dssp ---SCHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHS
T ss_pred ---CCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhC
Confidence 133445555555553 577777777777777765
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=3e-34 Score=248.59 Aligned_cols=211 Identities=20% Similarity=0.195 Sum_probs=160.9
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHH-HHcCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKE-AIEGL 131 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~~~~ 131 (320)
+|++||||||+|||+++|++|+++|++|++++|+++ ..+....++|+++. .....+.. .....
T Consensus 1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~--------------~~~~~~~~~d~~~~--~~~~~~~~~~~~~~ 64 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE--------------GEDLIYVEGDVTRE--EDVRRAVARAQEEA 64 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC--------------SSSSEEEECCTTCH--HHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc--------------cccceEeeccccch--hhhHHHHHhhhccc
Confidence 589999999999999999999999999999999865 23456788898864 22222222 22223
Q ss_pred CeEEEEEccCCCCC--ccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHh------hhcCCCcEEEEEcCccccccCCCC
Q 020854 132 DVGVLINNVGISYP--YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPG------MLKRKKGAIVNIGSGAAIVIPSDP 203 (320)
Q Consensus 132 ~id~lI~nAG~~~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------l~~~~~g~Iv~vsS~~~~~~~~~~ 203 (320)
..+.++++++.... ........+.+.+++++++|+.+++.+++.+.+. |.+++.|+||++||.++.. +.+
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~--~~~ 142 (241)
T d1uaya_ 65 PLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE--GQI 142 (241)
T ss_dssp CEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH--CCT
T ss_pred cccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhcc--CCC
Confidence 45567777765442 1234556788899999999999999999999998 4455679999999999998 789
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCC-CCcccCCchHH
Q 020854 204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGY-EPCCTPYWPHS 282 (320)
Q Consensus 204 ~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~-~~~~~~~~~~~ 282 (320)
+.++|++||+|+.+|+++|+.|++++|||||+|+||+|+|++... .. ++..+.+....+. +|...|++++.
T Consensus 143 ~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~-------~~-~~~~~~~~~~~~~~~R~g~pedvA~ 214 (241)
T d1uaya_ 143 GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG-------LP-EKAKASLAAQVPFPPRLGRPEEYAA 214 (241)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT-------SC-HHHHHHHHTTCCSSCSCCCHHHHHH
T ss_pred CchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccch-------hh-hhHHHHHHhcCCCCCCCcCHHHHHH
Confidence 999999999999999999999999999999999999999998763 11 2222223333332 45566666666
Q ss_pred HHHHHHh
Q 020854 283 FIWGVLS 289 (320)
Q Consensus 283 ~~~~l~~ 289 (320)
++.||++
T Consensus 215 ~v~fL~s 221 (241)
T d1uaya_ 215 LVLHILE 221 (241)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 6666554
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=100.00 E-value=2.7e-33 Score=250.04 Aligned_cols=232 Identities=16% Similarity=0.093 Sum_probs=180.9
Q ss_pred ccccCCCEEEEECCCC--cHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcC---------C-ceEEEEEEeCC-
Q 020854 48 NLRKYGSWALVTGPTD--GIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYA---------K-TQIKSVVVDFS- 114 (320)
Q Consensus 48 ~~~~~gk~vlITGas~--GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~---------~-~~~~~~~~D~~- 114 (320)
.++++||++|||||+| |||+++|++|+++|++|++++|+................ . ..-....+|..
T Consensus 3 ~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (297)
T d1d7oa_ 3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVF 82 (297)
T ss_dssp CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTC
T ss_pred CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhc
Confidence 3667899999999876 999999999999999999999987654333222211110 0 01123334321
Q ss_pred ---------------------CCcHHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHH
Q 020854 115 ---------------------GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173 (320)
Q Consensus 115 ---------------------~~~~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~ 173 (320)
+..++.++++.+++++ +|+||||||.......++.+.+.++|++++++|+.+++.++
T Consensus 83 ~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~--iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~ 160 (297)
T d1d7oa_ 83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGS--IDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLL 160 (297)
T ss_dssp CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSC--EEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred cccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCC--Ccccccccccccccccchhhhhcccccccccchhhhhhhhh
Confidence 1235677888888885 66999999986544567889999999999999999999999
Q ss_pred HHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHHHHHHHHHHHHHHHHHHc-cCCceEEEEeccceecCCCccccCC
Q 020854 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR-KSGIDVQCQVPLYVATKMASIKRSS 252 (320)
Q Consensus 174 ~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~asKaal~~~~~~l~~el~-~~gi~v~~v~PG~v~T~~~~~~~~~ 252 (320)
++++|.+.+ .|++++++|.+.... ..+....|+++|+++.++++.++.|++ ++|||||+|+||+++|++...
T Consensus 161 ~~~~~~~~~--~g~~~~~~~~~~~~~-~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~---- 233 (297)
T d1d7oa_ 161 SHFLPIMNP--GGASISLTYIASERI-IPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKA---- 233 (297)
T ss_dssp HHHGGGEEE--EEEEEEEECGGGTSC-CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSC----
T ss_pred hHHHHHhhc--CCcceeeeehhhccc-ccccccceecccccccccccccchhccccceEEecccccccccchhhhh----
Confidence 999998854 466777777666542 356778899999999999999999996 589999999999999999864
Q ss_pred CCCCCHHHHHHHHHHHhCCCCcccCCchHHHHHHHHhh
Q 020854 253 FFVPSTDVYARAAMRWIGYEPCCTPYWPHSFIWGVLSI 290 (320)
Q Consensus 253 ~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~l~~~ 290 (320)
....++..+...+..+.+|...|++++.++.||++-
T Consensus 234 --~~~~~~~~~~~~~~~PlgR~~~peevA~~v~fL~S~ 269 (297)
T d1d7oa_ 234 --IGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSP 269 (297)
T ss_dssp --CSHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSG
T ss_pred --ccCCHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCc
Confidence 234667778888888888999999999999888753
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=100.00 E-value=1e-31 Score=235.91 Aligned_cols=221 Identities=18% Similarity=0.141 Sum_probs=166.6
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHH-HHHHHHHHHhhcCCceEEEEEEeCCCCc------HHHHHHHHH
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK-LKDVSDSIQAKYAKTQIKSVVVDFSGDL------DEGVERIKE 126 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~D~~~~~------~~~~~~~~~ 126 (320)
.++||||||+|||+++|++|+++|++|++++|+.++ .+++.+++.+.+ +.....+.+|..++. ++.++.+.+
T Consensus 2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (266)
T d1mxha_ 2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR-AGSAVLCKGDLSLSSSLLDCCEDIIDCSFR 80 (266)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSTTHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhc-CCceEEEecccccchhHHHHHHHHHHHHHH
Confidence 489999999999999999999999999999998554 577788887765 446667777666432 344456666
Q ss_pred HHcCCCeEEEEEccCCCCCccc---------cccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC-----CCcEEEEEc
Q 020854 127 AIEGLDVGVLINNVGISYPYAR---------FFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-----KKGAIVNIG 192 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~---------~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-----~~g~Iv~vs 192 (320)
++++ +|+||||||+..+... ...+...+.+...+..|+.+++...+...+.+... ..+.+++++
T Consensus 81 ~~g~--iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (266)
T d1mxha_ 81 AFGR--CDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLC 158 (266)
T ss_dssp HHSC--CCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEEC
T ss_pred HhCC--CCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhh
Confidence 7775 5599999998764110 11223345677889999999999999988877543 357899999
Q ss_pred CccccccCCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCC
Q 020854 193 SGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 193 S~~~~~~~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
|..+.. +.|++..|++||+|+++|+++++.|++++|||||+|+||+++|++.. +++..+.+.+.++.+
T Consensus 159 ~~~~~~--~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~----------~~~~~~~~~~~~pl~ 226 (266)
T d1mxha_ 159 DAMTDL--PLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAM----------PQETQEEYRRKVPLG 226 (266)
T ss_dssp CGGGGS--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSS----------CHHHHHHHHTTCTTT
T ss_pred hccccc--cCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccC----------CHHHHHHHHhcCCCC
Confidence 999987 78999999999999999999999999999999999999999998764 234444445555444
Q ss_pred C-cccCCchHHHHHHHHh
Q 020854 273 P-CCTPYWPHSFIWGVLS 289 (320)
Q Consensus 273 ~-~~~~~~~~~~~~~l~~ 289 (320)
+ ..+|++.+.++.||++
T Consensus 227 r~~~~peeva~~v~fL~s 244 (266)
T d1mxha_ 227 QSEASAAQIADAIAFLVS 244 (266)
T ss_dssp SCCBCHHHHHHHHHHHHS
T ss_pred CCCCCHHHHHHHHHHHhC
Confidence 3 3566666666666554
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=100.00 E-value=5.6e-32 Score=238.85 Aligned_cols=224 Identities=14% Similarity=0.109 Sum_probs=170.1
Q ss_pred cCCCEEEEECCCC--cHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 51 KYGSWALVTGPTD--GIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 51 ~~gk~vlITGas~--GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++||++|||||+| |||+++|++|+++|++|++++|+++ +++..+++.+.+ .......+|++++ +++.++++.+
T Consensus 3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~ 79 (274)
T d2pd4a1 3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQEL--NSPYVYELDVSKEEHFKSLYNSVKK 79 (274)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHT--TCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhhC--CceeEeeecccchhhHHHHHHHHHH
Confidence 6799999999875 9999999999999999999999954 455566666654 3455678888874 3556677777
Q ss_pred HHcCCCeEEEEEccCCCCCc--cccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCC
Q 020854 127 AIEGLDVGVLINNVGISYPY--ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL 204 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~--~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~ 204 (320)
.++. +|++|||+|..... .....+...+.+...+.++..+.....+.+.+.. ++.+.|+++||.+... +.+.
T Consensus 80 ~~g~--id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~~~~~~--~~~~ 153 (274)
T d2pd4a1 80 DLGS--LDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLL--NNGASVLTLSYLGSTK--YMAH 153 (274)
T ss_dssp HTSC--EEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE--EEEEEEEEEECGGGTS--BCTT
T ss_pred HcCC--CCeEEeecccccccccccccccccchhhhhhhcccccccccccccccccc--ccCcceeeeccccccc--cccc
Confidence 7664 77999999986541 1233344455555666666666666666665543 2334566666666655 5677
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHHHHHHhCCCCcccCCchHHHH
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARAAMRWIGYEPCCTPYWPHSFI 284 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~~~ 284 (320)
...|++||+|+.+++++++.|++++|||||+|+||+++|++... ..+.++..+......+.+|...|++++.++
T Consensus 154 ~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~------~~~~~~~~~~~~~~~p~~r~~~pedIA~~v 227 (274)
T d2pd4a1 154 YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSG------IADFRMILKWNEINAPLRKNVSLEEVGNAG 227 (274)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGG------STTHHHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred chhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccc------cCchHHHHHHHhhhhhccCCcCHHHHHHHH
Confidence 89999999999999999999999999999999999999999764 245567777777777778888999999988
Q ss_pred HHHHh
Q 020854 285 WGVLS 289 (320)
Q Consensus 285 ~~l~~ 289 (320)
.||++
T Consensus 228 ~fL~S 232 (274)
T d2pd4a1 228 MYLLS 232 (274)
T ss_dssp HHHHS
T ss_pred HHHhC
Confidence 88876
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=100.00 E-value=3.5e-32 Score=239.32 Aligned_cols=230 Identities=17% Similarity=0.126 Sum_probs=176.8
Q ss_pred cCCCEEEEEC--CCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC--cHHHHHHHHH
Q 020854 51 KYGSWALVTG--PTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE 126 (320)
Q Consensus 51 ~~gk~vlITG--as~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~ 126 (320)
++||++|||| |++|||+++|++|+++|++|++++|+.+++.+ ++.+.. +.....+++|++++ +++.++.+.+
T Consensus 4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~---~~~~~~-~~~~~~~~~dv~~~~~~~~~~~~v~~ 79 (268)
T d2h7ma1 4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQ---RITDRL-PAKAPLLELDVQNEEHLASLAGRVTE 79 (268)
T ss_dssp TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHH---HHHTTS-SSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHH---HHHHHc-CCceeeEeeecccccccccccchhhh
Confidence 6799999999 46799999999999999999999999877543 232322 45677889999974 3566677777
Q ss_pred HHcCC-CeEEEEEccCCCCC---ccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCC
Q 020854 127 AIEGL-DVGVLINNVGISYP---YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD 202 (320)
Q Consensus 127 ~~~~~-~id~lI~nAG~~~~---~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~ 202 (320)
.++.. ++|++|||+|.... ...++.+.+.+++.+.+++|+.+++...+...+.+. ++.+++++|..... +.
T Consensus 80 ~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~s~~~~~--~~ 154 (268)
T d2h7ma1 80 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMN---PGGSIVGMDFDPSR--AM 154 (268)
T ss_dssp HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE---EEEEEEEEECCCSS--CC
T ss_pred ccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcc---cccccccccccccc--cC
Confidence 77765 58999999997642 123567888999999999999999999999887652 34455666666666 67
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCC----CCHHHHHHHHHHHhCCC-CcccC
Q 020854 203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFV----PSTDVYARAAMRWIGYE-PCCTP 277 (320)
Q Consensus 203 ~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~----~~~~~~a~~i~~~l~~~-~~~~~ 277 (320)
|+...|+++|+|+.+|+++++.|++++|||||+|+||+++|++.......... ...+...+......+.+ +...|
T Consensus 155 p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~p 234 (268)
T d2h7ma1 155 PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDA 234 (268)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCC
T ss_pred cccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCCH
Confidence 88999999999999999999999999999999999999999987531111111 12233444555555555 47788
Q ss_pred CchHHHHHHHHh
Q 020854 278 YWPHSFIWGVLS 289 (320)
Q Consensus 278 ~~~~~~~~~l~~ 289 (320)
.+....+.||++
T Consensus 235 ~dva~~v~fL~S 246 (268)
T d2h7ma1 235 TPVAKTVCALLS 246 (268)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHHhC
Confidence 888888888765
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.97 E-value=1.5e-31 Score=234.17 Aligned_cols=228 Identities=19% Similarity=0.194 Sum_probs=174.2
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCH---HHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP---DKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA 127 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 127 (320)
.++++|||||++|||+++|++|+++|+ +|++++|+. +..++..+++.+. +.++.++.||++|. +.++++.+.
T Consensus 8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dv~d~--~~~~~~~~~ 83 (259)
T d2fr1a1 8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL--GARTTVAACDVTDR--ESVRELLGG 83 (259)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCH--HHHHHHHHT
T ss_pred CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhc--cccccccccccchH--HHHHHhhcc
Confidence 467999999999999999999999999 599999975 3456667777654 57899999999987 666777766
Q ss_pred HcCC-CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCch
Q 020854 128 IEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS 206 (320)
Q Consensus 128 ~~~~-~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~ 206 (320)
+... ++|.||||+|.... .++.+.+.++++.++++|+.|++++.+.+ ...+.++||++||.++.. +.++.+
T Consensus 84 i~~~~~i~~vv~~ag~~~~--~~~~~~~~~~~~~~~~~~~~g~~~l~~~~----~~~~~~~iv~~SS~a~~~--g~~~~~ 155 (259)
T d2fr1a1 84 IGDDVPLSAVFHAAATLDD--GTVDTLTGERIERASRAKVLGARNLHELT----RELDLTAFVLFSSFASAF--GAPGLG 155 (259)
T ss_dssp SCTTSCEEEEEECCCCCCC--CCGGGCCHHHHHHHTHHHHHHHHHHHHHH----TTSCCSEEEEEEEHHHHT--CCTTCT
T ss_pred ccccccccccccccccccc--cccccccHHHHHHHhhhhccchhHHHHHh----hccCCceEeeecchhhcc--CCcccH
Confidence 6543 68999999999875 67899999999999999999999988764 345678999999999998 789999
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecC-CCcc------ccCCCCCCCHHHHHHHHHHHhCCCCc---cc
Q 020854 207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATK-MASI------KRSSFFVPSTDVYARAAMRWIGYEPC---CT 276 (320)
Q Consensus 207 ~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~-~~~~------~~~~~~~~~~~~~a~~i~~~l~~~~~---~~ 276 (320)
.|+++|+++++|++.++ ..|++|++|+||.+.++ |... .......++|+++++.+...+..+.. +.
T Consensus 156 ~YaAaka~l~~la~~~~----~~Gi~v~~I~pg~~~~~g~~~~~~~~~~~~~G~~~~~~~~~~~~l~~~l~~~~~~~~v~ 231 (259)
T d2fr1a1 156 GYAPGNAYLDGLAQQRR----SDGLPATAVAWGTWAGSGMAEGPVADRFRRHGVIEMPPETACRALQNALDRAEVCPIVI 231 (259)
T ss_dssp TTHHHHHHHHHHHHHHH----HTTCCCEEEEECCBC------------CTTTTEECBCHHHHHHHHHHHHHTTCSSCEEC
T ss_pred HHHHHHHhHHHHHHHHH----hCCCCEEECCCCcccCCccccchHHHHHHhcCCCCCCHHHHHHHHHHHHhCCCceEEEE
Confidence 99999999988776654 56999999999987543 4332 11122357899999999998876632 23
Q ss_pred CCchHHHHHHHHhhchHHH
Q 020854 277 PYWPHSFIWGVLSILPEKL 295 (320)
Q Consensus 277 ~~~~~~~~~~l~~~~P~~~ 295 (320)
+.++.++........|..+
T Consensus 232 ~~d~~~~~~~~~~~~p~~L 250 (259)
T d2fr1a1 232 DVRWDRFLLAYTAQRPTRL 250 (259)
T ss_dssp EECHHHHHHHHTSSSCCCT
T ss_pred eCcHHHHHHhhhccCCchh
Confidence 3333344433334444433
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.96 E-value=1.2e-28 Score=215.02 Aligned_cols=200 Identities=21% Similarity=0.244 Sum_probs=132.8
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHH-HHHHcCC-
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERI-KEAIEGL- 131 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~-~~~~~~~- 131 (320)
|+||||||++|||+++|++|+++|++|++++|+.++ ..+|+.+. ...+.. .+.....
T Consensus 2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-------------------~~~d~~~~--~~~~~~~~~~~~~~~ 60 (257)
T d1fjha_ 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-------------------VIADLSTA--EGRKQAIADVLAKCS 60 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-------------------EECCTTSH--HHHHHHHHHHHTTCT
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-------------------HHHHhcCH--HHHHHHHHHHHHHhC
Confidence 899999999999999999999999999999997542 23455543 222222 2222211
Q ss_pred -CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccccc-----------
Q 020854 132 -DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI----------- 199 (320)
Q Consensus 132 -~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~----------- 199 (320)
.+|++|||||+... .+.+.....+|..+...+.+...+.+.+...+.+.++++......
T Consensus 61 ~~id~lv~~Ag~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (257)
T d1fjha_ 61 KGMDGLVLCAGLGPQ---------TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALAL 131 (257)
T ss_dssp TCCSEEEECCCCCTT---------CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHH
T ss_pred CCCcEEEEcCCCCCc---------HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhc
Confidence 47799999997542 123577789999999999999999888776666666665443220
Q ss_pred ---------------CCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCccccCCCCCCCHHHHHHH
Q 020854 200 ---------------PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDVYARA 264 (320)
Q Consensus 200 ---------------~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~a~~ 264 (320)
...++..+|++||+|+.+|+|+|+.||+++|||||+|+||+++|++.+.. ...++..+.
T Consensus 132 ~~g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~------~~~~~~~~~ 205 (257)
T d1fjha_ 132 EAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAG------LQDPRYGES 205 (257)
T ss_dssp HHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC------------------------
T ss_pred cCCcEEEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhh------cCCHHHHHH
Confidence 01234567999999999999999999999999999999999999997631 112222333
Q ss_pred HHHH-hCCCCcccCCchHHHHHHHHh
Q 020854 265 AMRW-IGYEPCCTPYWPHSFIWGVLS 289 (320)
Q Consensus 265 i~~~-l~~~~~~~~~~~~~~~~~l~~ 289 (320)
+.+. .+.+|...|++++.++.||++
T Consensus 206 ~~~~~~PlgR~g~p~eva~~v~fL~S 231 (257)
T d1fjha_ 206 IAKFVPPMGRRAEPSEMASVIAFLMS 231 (257)
T ss_dssp ---CCCSTTSCCCTHHHHHHHHHHTS
T ss_pred HHhcCCCCCCCcCHHHHHHHHHHHhC
Confidence 3332 245566677777777666654
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=99.80 E-value=3.8e-21 Score=159.91 Aligned_cols=156 Identities=19% Similarity=0.191 Sum_probs=112.8
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA 127 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 127 (320)
..+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. .+....+|++|. +++.+.
T Consensus 18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~d~~~~-----~~~~~~ 89 (191)
T d1luaa1 18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF---KVNVTAAETADD-----ASRAEA 89 (191)
T ss_dssp TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH---TCCCEEEECCSH-----HHHHHH
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhcc---chhhhhhhcccH-----HHHHHH
Confidence 345779999999999999999999999999999999999999999999987753 345677898875 344555
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchh
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV 207 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~ 207 (320)
+++ +|+||||||... ...+.+.|++.+++|+.+.++....+.+.+... ......+++...... ...+...
T Consensus 90 ~~~--iDilin~Ag~g~------~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~-~~~g~~~ 159 (191)
T d1luaa1 90 VKG--AHFVFTAGAIGL------ELLPQAAWQNESSIEIVADYNAQPPLGIGGIDA-TDKGKEYGGKRAFGA-LGIGGLK 159 (191)
T ss_dssp TTT--CSEEEECCCTTC------CCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCT-TCEEEEETTEEEECH-HHHHHHH
T ss_pred hcC--cCeeeecCcccc------ccCCHHHHHhhhcceeehhHhhHHHHHHHhhhh-ccCcEEecceEEEec-cCcCcHH
Confidence 665 559999999642 356889999999999888877655543333222 122233333333221 1123457
Q ss_pred hHHHHHHHHHHHHH
Q 020854 208 YAATKAYIDQFSRS 221 (320)
Q Consensus 208 Y~asKaal~~~~~~ 221 (320)
|+++|+++..++++
T Consensus 160 y~~sk~a~~~l~~s 173 (191)
T d1luaa1 160 LKLHRACIAKLFES 173 (191)
T ss_dssp HHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999887753
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.72 E-value=9.7e-17 Score=145.51 Aligned_cols=203 Identities=16% Similarity=0.075 Sum_probs=137.6
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHH-----HHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD-----KLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA 127 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~-----~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 127 (320)
.|+||||||||-||..++++|.++|++|+.++|... +++....+.... ..++.++++|++|. +.++++
T Consensus 1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~--~~~~~~--- 73 (357)
T d1db3a_ 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTC--NPKFHLHYGDLSDT--SNLTRI--- 73 (357)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-----------------------CCEEECCCCSSCH--HHHHHH---
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhc--CCCeEEEEeecCCH--HHHHHH---
Confidence 389999999999999999999999999999999543 333322222111 45788999999986 444444
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC-------
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP------- 200 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~------- 200 (320)
+...++|+++|.|+..... . +.++.+..+++|+.|+.++++++...- .++..++|++||.+.+..+
T Consensus 74 ~~~~~~d~v~h~aa~~~~~-~-----~~~~~~~~~~~Nv~gt~nllea~~~~~-~~~~~r~i~~SS~~vYG~~~~~~~~E 146 (357)
T d1db3a_ 74 LREVQPDEVYNLGAMSHVA-V-----SFESPEYTADVDAMGTLRLLEAIRFLG-LEKKTRFYQASTSELYGLVQEIPQKE 146 (357)
T ss_dssp HHHHCCSEEEECCCCCTTT-T-----TTSCHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGGTTCCSSSBCT
T ss_pred HhccCCCEEEEeecccccc-h-----hhhCHHHHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEEEchhhhCCCCCCCcCC
Confidence 4434567999999986531 1 222345678999999999999876432 2345689999997643211
Q ss_pred --CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc-----------------ccc---------CC
Q 020854 201 --SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS-----------------IKR---------SS 252 (320)
Q Consensus 201 --~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~-----------------~~~---------~~ 252 (320)
+......|+.||.+.+.+++.++..+ |+++..+.|+.+-.|... ... ..
T Consensus 147 ~~~~~P~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~ 223 (357)
T d1db3a_ 147 TTPFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSL 223 (357)
T ss_dssp TSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCE
T ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCee
Confidence 01125679999999999999888764 789999999888776321 000 00
Q ss_pred CCCCCHHHHHHHHHHHhCCC
Q 020854 253 FFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 253 ~~~~~~~~~a~~i~~~l~~~ 272 (320)
.-....+++++.++.+++.+
T Consensus 224 r~~~~v~D~~~a~~~~~~~~ 243 (357)
T d1db3a_ 224 RDWGHAKDYVKMQWMMLQQE 243 (357)
T ss_dssp ECCEEHHHHHHHHHHTTSSS
T ss_pred ecceeechHHHHHHHHHhCC
Confidence 12467889999998888765
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.66 E-value=9.5e-15 Score=131.30 Aligned_cols=202 Identities=18% Similarity=0.171 Sum_probs=139.8
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.+||+||||||||-||..++++|.++|++|+.+.|+.++.....+.............+..|+.|. . .+.+.+.
T Consensus 9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~---~~~~~~~- 82 (342)
T d1y1pa1 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQ--G---AYDEVIK- 82 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTST--T---TTTTTTT-
T ss_pred CCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccch--h---hhhhhcc-
Confidence 359999999999999999999999999999999999887766555443333344455667788876 2 2222233
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCC---------
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS--------- 201 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~--------- 201 (320)
+.|.++|+++.... ..+. ...+++|+.|+.++++.+... ....++|++||..+...+.
T Consensus 83 -~~~~v~~~a~~~~~------~~~~---~~~~~~nv~gt~~ll~~~~~~---~~v~~~i~~SS~~~~~~~~~~~~~~~~~ 149 (342)
T d1y1pa1 83 -GAAGVAHIASVVSF------SNKY---DEVVTPAIGGTLNALRAAAAT---PSVKRFVLTSSTVSALIPKPNVEGIYLD 149 (342)
T ss_dssp -TCSEEEECCCCCSC------CSCH---HHHHHHHHHHHHHHHHHHHTC---TTCCEEEEECCGGGTCCCCTTCCCCEEC
T ss_pred -cchhhhhhcccccc------cccc---cccccchhhhHHHHHHhhhcc---cccccccccccceeeccCCCCCCCcccc
Confidence 35599999986432 2222 455688999999988886432 2457899999976533100
Q ss_pred --------------------CCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc-------------
Q 020854 202 --------------------DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI------------- 248 (320)
Q Consensus 202 --------------------~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~------------- 248 (320)
......|+.||.+.+.++..+.++.. .++++.++.|+.+-.|....
T Consensus 150 e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~ 228 (342)
T d1y1pa1 150 EKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-PHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMS 228 (342)
T ss_dssp TTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEEEEEESEEECCCSCTTTCCCHHHHHHHH
T ss_pred ccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc-cccccceecccceeCCCCCccccccchHHHHHH
Confidence 01134699999999999998887763 46888889998876553210
Q ss_pred -----------ccCCCCCCCHHHHHHHHHHHhCCC
Q 020854 249 -----------KRSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 249 -----------~~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
..........+++|+.++..+..+
T Consensus 229 l~~g~~~~~~~~~~~~~~v~v~Dva~~~i~~l~~~ 263 (342)
T d1y1pa1 229 LFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLP 263 (342)
T ss_dssp HHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCT
T ss_pred HHcCCcCcccCCccceeeeeHHHHHHHHHHhhcCc
Confidence 001111456788998888877554
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.63 E-value=4.5e-15 Score=133.24 Aligned_cols=172 Identities=16% Similarity=0.149 Sum_probs=123.8
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHH---HHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD---KLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.+|||||+|-||..++++|+++|++|++++|-.. ......+... ...+.++++|++|. +.++++ +...
T Consensus 2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~d~--~~l~~~---~~~~ 72 (338)
T d1udca_ 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG----GKHPTFVEGDIRNE--ALMTEI---LHDH 72 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH----TSCCEEEECCTTCH--HHHHHH---HHHT
T ss_pred EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhc----CCCCEEEEeecCCH--HHHHHH---Hhcc
Confidence 4999999999999999999999999999986322 1111122221 45688899999986 444443 4433
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC----------C
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP----------S 201 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~----------~ 201 (320)
++|+|||.|+.... ..+.++..+++++|+.|+.++++++... +-.++|++||.+..... .
T Consensus 73 ~~d~ViHlAa~~~~------~~~~~~~~~~~~~Nv~gt~nlL~~~~~~----~v~~~i~~Ss~~vy~~~~~~~~~e~~~~ 142 (338)
T d1udca_ 73 AIDTVIHFAGLKAV------GESVQKPLEYYDNNVNGTLRLISAMRAA----NVKNFIFSSSATVYGDQPKIPYVESFPT 142 (338)
T ss_dssp TCSEEEECCSCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCSCCSSSBCTTSCC
T ss_pred CCCEEEECCCccch------hhHHhCHHHHHHhHHHHHHHHHHHHHHh----CCCEEEecCcceEEcccccccccccccc
Confidence 46799999996532 1123334678899999999999987653 45689999997765421 1
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 202 DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 202 ~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
......|+.+|.+.+.+.+....+ ..++.+..+.|+.+-.+-..
T Consensus 143 ~~p~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~ilR~~~v~G~~~~ 186 (338)
T d1udca_ 143 GTPQSPYGKSKLMVEQILTDLQKA--QPDWSIALLRYFNPVGAHPS 186 (338)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHH--STTCEEEEEEECEEECCCTT
T ss_pred CCCcchHHHHHhhhhHHHHHHHhh--ccCCeEEEEeeccEEeccCC
Confidence 122567999999999999877766 35789999999988876544
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.61 E-value=9.4e-15 Score=131.51 Aligned_cols=172 Identities=17% Similarity=0.151 Sum_probs=121.5
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHH-HHH--HHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK-LKD--VSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~-~~~--~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
|+||||||||-||..++++|+++|++|+++++.... ... ..+.+. ...+.++.+|+.|. +.++.+.+.
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~----~~~v~~~~~Dl~d~--~~l~~~~~~--- 72 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT----KHHIPFYEVDLCDR--KGLEKVFKE--- 72 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH----TSCCCEEECCTTCH--HHHHHHHHH---
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhc----ccCCeEEEeecCCH--HHHHHHHhc---
Confidence 799999999999999999999999999999763221 111 111121 44678889999976 444444443
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCcccccc-----------
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI----------- 199 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~----------- 199 (320)
.++|+|||.|+.... ....+.-.....+|+.|+.++.+++.. .+..++|++||...+..
T Consensus 73 ~~~d~VihlAa~~~~------~~~~~~~~~~~~~N~~~t~~ll~~~~~----~~i~~~i~~SS~~vyg~~~~~~~~~~~~ 142 (347)
T d1z45a2 73 YKIDSVIHFAGLKAV------GESTQIPLRYYHNNILGTVVLLELMQQ----YNVSKFVFSSSATVYGDATRFPNMIPIP 142 (347)
T ss_dssp SCCCEEEECCSCCCH------HHHHHSHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCCGGGSTTCCSBC
T ss_pred cCCCEEEEccccccc------cccccCcccccccchhhhHHHHHHHHh----cccceEEeecceeeecCcccCCCCCccc
Confidence 347799999997642 112223356778999999999999754 34458999999776531
Q ss_pred --CCCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCC
Q 020854 200 --PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKM 245 (320)
Q Consensus 200 --~~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~ 245 (320)
.+......|+.||.+.+.+.+.+..+. ..++.+..+.|+.+-.+.
T Consensus 143 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~~lR~~~v~g~~ 189 (347)
T d1z45a2 143 EECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGAH 189 (347)
T ss_dssp TTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECCC
T ss_pred cccCCCCCChhHhHHHHHHHHHHHHHHhh-ccCCcEEEEeecceEeec
Confidence 011124679999999999998887653 457888888888776554
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.61 E-value=9.9e-15 Score=121.73 Aligned_cols=183 Identities=16% Similarity=0.186 Sum_probs=123.6
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
..|.++||||||+||.+++++|+++|++|++++|+.+++... ....+..+.+|++|. +.+.+.+.+.
T Consensus 2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~--------~~~~~~~~~gD~~d~-----~~l~~al~~~ 68 (205)
T d1hdoa_ 2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE--------GPRPAHVVVGDVLQA-----ADVDKTVAGQ 68 (205)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS--------SCCCSEEEESCTTSH-----HHHHHHHTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc--------cccccccccccccch-----hhHHHHhcCC
Confidence 367899999999999999999999999999999998875421 134578899999876 3445555554
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCC--CCCchhhH
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS--DPLYSVYA 209 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~--~~~~~~Y~ 209 (320)
|+||+++|...+ .... +++..+..++++ .+++++-.++|++||......+. .+....|.
T Consensus 69 --d~vi~~~g~~~~----~~~~---------~~~~~~~~~l~~----aa~~~~v~r~i~~ss~~~~~~~~~~~~~~~~~~ 129 (205)
T d1hdoa_ 69 --DAVIVLLGTRND----LSPT---------TVMSEGARNIVA----AMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVT 129 (205)
T ss_dssp --SEEEECCCCTTC----CSCC---------CHHHHHHHHHHH----HHHHHTCCEEEEECCGGGTSCTTCSCGGGHHHH
T ss_pred --CEEEEEeccCCc----hhhh---------hhhHHHHHHHHH----HHHhcCCCeEEEEeeeeccCCCccccccccccc
Confidence 499999987543 1111 123334444444 45556677999999976654211 12234566
Q ss_pred HHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc-------ccCCCCCCCHHHHHHHHHHHhCCCC
Q 020854 210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI-------KRSSFFVPSTDVYARAAMRWIGYEP 273 (320)
Q Consensus 210 asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~-------~~~~~~~~~~~~~a~~i~~~l~~~~ 273 (320)
..|.+.+.+ ++..|++...|.||.+...-... ........+.+++|+.+++.+..+.
T Consensus 130 ~~~~~~e~~-------l~~~~~~~tiirp~~~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~ 193 (205)
T d1hdoa_ 130 DDHIRMHKV-------LRESGLKYVAVMPPHIGDQPLTGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDE 193 (205)
T ss_dssp HHHHHHHHH-------HHHTCSEEEEECCSEEECCCCCSCCEEESSSCSSCSEEEHHHHHHHHHHTTSCST
T ss_pred hHHHHHHHH-------HHhcCCceEEEecceecCCCCcccEEEeeCCCCCCCcCCHHHHHHHHHHHhCCCC
Confidence 666655543 33568999999999875432221 1122335789999999999998663
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.60 E-value=2.5e-14 Score=130.74 Aligned_cols=177 Identities=18% Similarity=0.097 Sum_probs=125.2
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH----------------HHHHHHHHHHHhhcCCceEEEEEEeCCCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP----------------DKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~----------------~~~~~~~~~l~~~~~~~~~~~~~~D~~~~ 116 (320)
|+.||||||||-||.+++++|+++|++|+++|.-. ....+......... +.++.++.+|++|.
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~Dl~d~ 79 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT-GKSIELYVGDICDF 79 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH-CCCCEEEESCTTSH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhc-CCCcEEEEccCCCH
Confidence 78999999999999999999999999999987211 11112222222222 45688999999987
Q ss_pred cHHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccc
Q 020854 117 LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAA 196 (320)
Q Consensus 117 ~~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~ 196 (320)
+.++++.+.. ++|+|+|.|+.... .....+.+.....+++|+.|+.++++.+... ....+++..||...
T Consensus 80 --~~l~~~~~~~---~~d~ViHlAa~~~~---~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~---~~~~~~i~~ss~~~ 148 (393)
T d1i24a_ 80 --EFLAESFKSF---EPDSVVHFGEQRSA---PYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF---GEECHLVKLGTMGE 148 (393)
T ss_dssp --HHHHHHHHHH---CCSEEEECCSCCCH---HHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH---CTTCEEEEECCGGG
T ss_pred --HHHHHHHHhh---cchheecccccccc---ccccccccccccccccccccccHHHHHHHHh---ccccceeecccccc
Confidence 5555554443 57799999987542 2234456667788999999999999987543 23456777777665
Q ss_pred cccC----------------------CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecC
Q 020854 197 IVIP----------------------SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATK 244 (320)
Q Consensus 197 ~~~~----------------------~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~ 244 (320)
...+ +......|+.||.+.+.+++.++.+. |+++.++.|+.+-.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---~l~~~~lR~~~v~G~ 215 (393)
T d1i24a_ 149 YGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGV 215 (393)
T ss_dssp GCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECS
T ss_pred ccccccccccccccccccccccccccccccccHHHHHhhhhccccccccccc---ceeeeecccccccCC
Confidence 4311 01123469999999999998887764 789999999877665
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.54 E-value=3.2e-14 Score=127.63 Aligned_cols=203 Identities=16% Similarity=0.062 Sum_probs=134.2
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHH-----HHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD-----KLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~-----~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
|+||||||+|-||..++++|.++|++|+.++|... +++........ .....+.++.+|++|. +.+.++.+..
T Consensus 2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~--~~~~~~~~~~ 78 (347)
T d1t2aa_ 2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQA-HIEGNMKLHYGDLTDS--TCLVKIINEV 78 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCH--HHHHHHHHHH
T ss_pred CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhh-hccCCcEEEEeecCCc--hhhHHHHhhc
Confidence 45599999999999999999999999999998542 22222111111 1134688999999986 5555555444
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC--------
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP-------- 200 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~-------- 200 (320)
+++++++.++.... ....+.....+++|+.|+.++..++..... .+..++|++||.+-+..+
T Consensus 79 ---~~~~v~~~~a~~~~------~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~E~ 148 (347)
T d1t2aa_ 79 ---KPTEIYNLGAQSHV------KISFDLAEYTADVDGVGTLRLLDAVKTCGL-INSVKFYQASTSELYGKVQEIPQKET 148 (347)
T ss_dssp ---CCSEEEECCSCCCH------HHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGTCSCSSSSBCTT
T ss_pred ---ccceeeeeeecccc------chhhccchhhhhhHHHHHHHHHHHHHHcCC-CCCcEEEEecchheecCCCCCCCCCC
Confidence 35578888876432 112333456679999999999988765432 234689999997654211
Q ss_pred -CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc-----------------ccc---------CCC
Q 020854 201 -SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS-----------------IKR---------SSF 253 (320)
Q Consensus 201 -~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~-----------------~~~---------~~~ 253 (320)
+......|+.||.+.+.++..++..+ |+.+..+.|+.+-.|-.. ... ...
T Consensus 149 ~~~~P~~~Yg~sK~~aE~~~~~~~~~~---~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r 225 (347)
T d1t2aa_ 149 TPFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKR 225 (347)
T ss_dssp SCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEE
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCccee
Confidence 01124579999999999998887764 788888888777665211 000 011
Q ss_pred CCCCHHHHHHHHHHHhCCC
Q 020854 254 FVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 254 ~~~~~~~~a~~i~~~l~~~ 272 (320)
.....+++++.+...+..+
T Consensus 226 ~~i~v~D~~~a~~~~~~~~ 244 (347)
T d1t2aa_ 226 DWGHAKDYVEAMWLMLQND 244 (347)
T ss_dssp CCEEHHHHHHHHHHHHHSS
T ss_pred eeeEecHHHHHHHHHhhcC
Confidence 2457788888888877653
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.53 E-value=4e-14 Score=126.49 Aligned_cols=204 Identities=16% Similarity=0.082 Sum_probs=134.9
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHH-----HHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD-----KLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~-----~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
|+||||||||-||..++++|+++|++|+.++|..+ ++.......... ....+.+..+|+++. +.+++..+
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Di~~~--~~~~~~~~-- 76 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV-NKALMKLHYADLTDA--SSLRRWID-- 76 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC---------CCEEEEECCTTCH--HHHHHHHH--
T ss_pred CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhc-cccceEEEEccccCH--HHHHHHHh--
Confidence 89999999999999999999999999999998432 222221111111 145678888999876 33333333
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC-CCcEEEEEcCccccccC-------
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSGAAIVIP------- 200 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-~~g~Iv~vsS~~~~~~~------- 200 (320)
..++|+|||.|+.... ....+.-...+.+|..+...+..++....... ...+++..||.......
T Consensus 77 -~~~~D~Vih~Aa~~~~------~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~ 149 (339)
T d1n7ha_ 77 -VIKPDEVYNLAAQSHV------AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSET 149 (339)
T ss_dssp -HHCCSEEEECCSCCCH------HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTT
T ss_pred -hhccchhhhccccccc------cccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCC
Confidence 3356799999997543 11223346677899999999988886544332 34456666665433210
Q ss_pred -CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc-----------------cccC------C---C
Q 020854 201 -SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS-----------------IKRS------S---F 253 (320)
Q Consensus 201 -~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~-----------------~~~~------~---~ 253 (320)
+......|+.||.+.+.++...+... |+.+..+.|+.+-.|... ...+ . .
T Consensus 150 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r 226 (339)
T d1n7ha_ 150 TPFHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASR 226 (339)
T ss_dssp SCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEE
T ss_pred CCCCCcchhhHHHHHHHHHHHHHHHHh---CCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccc
Confidence 11125689999999999998888764 799999999887666322 0000 0 0
Q ss_pred CCCCHHHHHHHHHHHhCCC
Q 020854 254 FVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 254 ~~~~~~~~a~~i~~~l~~~ 272 (320)
.....+++++.+...+..+
T Consensus 227 d~~~v~D~a~~~~~~~~~~ 245 (339)
T d1n7ha_ 227 DWGFAGDYVEAMWLMLQQE 245 (339)
T ss_dssp ECEEHHHHHHHHHHHHTSS
T ss_pred cceeeehHHHHHHHHHhcC
Confidence 1356888898888888766
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.52 E-value=1.7e-13 Score=122.77 Aligned_cols=176 Identities=16% Similarity=0.096 Sum_probs=122.8
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCC----HHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN----PDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERI 124 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~----~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~ 124 (320)
+...-|++|||||||.||..++++|.++|++|+.++|. ....+...... .......+.++..|..|. ...
T Consensus 12 ~~~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~d~-----~~~ 85 (341)
T d1sb8a_ 12 LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLV-SEKQWSNFKFIQGDIRNL-----DDC 85 (341)
T ss_dssp HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHS-CHHHHTTEEEEECCTTSH-----HHH
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhh-hhcccCCeeEEeeccccc-----ccc
Confidence 33456899999999999999999999999999999862 22222222111 111124578888888765 233
Q ss_pred HHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC----
Q 020854 125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---- 200 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~---- 200 (320)
...... .+.+++.++.... ..+.++....+++|+.|+.++.+++.. .+..++|++||.+.+...
T Consensus 86 ~~~~~~--~~~v~~~~a~~~~------~~~~~~~~~~~~~Nv~gt~~ll~~~~~----~~~~~~i~~SS~~vyg~~~~~~ 153 (341)
T d1sb8a_ 86 NNACAG--VDYVLHQAALGSV------PRSINDPITSNATNIDGFLNMLIAARD----AKVQSFTYAASSSTYGDHPGLP 153 (341)
T ss_dssp HHHHTT--CSEEEECCSCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGTTCCCSS
T ss_pred cccccc--ccccccccccccc------cccccCccchhheeehhHHHHHHHHHh----cCCceEEEcccceeeCCCCCCC
Confidence 333333 3377777765432 113445677889999999999998754 345689999998775421
Q ss_pred -----CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCC
Q 020854 201 -----SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKM 245 (320)
Q Consensus 201 -----~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~ 245 (320)
+......|+.||.+.+.+++.++... ++++..+.|+.+-.+.
T Consensus 154 ~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~v~G~~ 200 (341)
T d1sb8a_ 154 KVEDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRR 200 (341)
T ss_dssp BCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTT
T ss_pred ccCCCCCCCCCcchHHHHHHHHHHHHHHHHh---CCCeEEEEeceeeccC
Confidence 11124789999999999999988764 6888899998776553
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.51 E-value=2.2e-14 Score=129.93 Aligned_cols=202 Identities=15% Similarity=0.038 Sum_probs=136.7
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEE-EeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCe
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV 133 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 133 (320)
.||||||||-||..++++|++.|++|++ +++...... .+.+........+.++.+|++|. ..++.+.+.. ++
T Consensus 2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~--~~l~~~~~~~---~~ 74 (361)
T d1kewa_ 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN--LESLSDISESNRYNFEHADICDS--AEITRIFEQY---QP 74 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCC--GGGGTTTTTCTTEEEEECCTTCH--HHHHHHHHHH---CC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcccc--HHHHHhhhhcCCcEEEEccCCCH--HHHHHHHHhC---CC
Confidence 4899999999999999999999997554 443211100 01111222245788999999987 4445444433 46
Q ss_pred EEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC-----CCcEEEEEcCccccccC--------
Q 020854 134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-----KKGAIVNIGSGAAIVIP-------- 200 (320)
Q Consensus 134 d~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-----~~g~Iv~vsS~~~~~~~-------- 200 (320)
|+|||.|+.... ..+.++....+++|+.|+.++.+.+....... +..++|++||.+.+...
T Consensus 75 d~VihlAa~~~~------~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~ 148 (361)
T d1kewa_ 75 DAVMHLAAESHV------DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVEN 148 (361)
T ss_dssp SEEEECCSCCCH------HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCT
T ss_pred CEEEECccccch------hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCcccc
Confidence 799999986542 11223335678999999999999988765432 34689999997765310
Q ss_pred -----------CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc--------------ccc-----
Q 020854 201 -----------SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS--------------IKR----- 250 (320)
Q Consensus 201 -----------~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~--------------~~~----- 250 (320)
+......|+.||.+.+.+++..+..+ |+++.++.|+.|-.|... ...
T Consensus 149 ~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~---~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g 225 (361)
T d1kewa_ 149 SVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYG 225 (361)
T ss_dssp TSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEET
T ss_pred ccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeC
Confidence 01124569999999999999998764 789999999888776432 000
Q ss_pred CC---CCCCCHHHHHHHHHHHhCCC
Q 020854 251 SS---FFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 251 ~~---~~~~~~~~~a~~i~~~l~~~ 272 (320)
+. ..+...+++|+.+...+..+
T Consensus 226 ~g~~~r~~i~v~D~a~ai~~~~~~~ 250 (361)
T d1kewa_ 226 KGDQIRDWLYVEDHARALHMVVTEG 250 (361)
T ss_dssp TSCCEEEEEEHHHHHHHHHHHHHHC
T ss_pred CCCeEEeCEEHHHHHHHHHHHHhcC
Confidence 00 01357888888888877543
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.51 E-value=3.5e-13 Score=120.81 Aligned_cols=174 Identities=15% Similarity=0.161 Sum_probs=121.3
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeC------CHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR------NPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKE 126 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r------~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 126 (320)
.|.||||||+|-||.+++++|+++|++|+.+++ +.....+..+.+... .+.++.++.+|++|. +.+.+
T Consensus 2 ~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~-----~~l~~ 75 (346)
T d1ek6a_ 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL-TGRSVEFEEMDILDQ-----GALQR 75 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH-HTCCCEEEECCTTCH-----HHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHh-cCCCcEEEEeecccc-----ccccc
Confidence 378999999999999999999999999999874 111111112222211 155788999999986 33444
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC------
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP------ 200 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~------ 200 (320)
.+...++++++|.|+.... ..+.++..+.+++|+.|+.++.+++. +.+-.+++++||.......
T Consensus 76 ~~~~~~~~~i~h~Aa~~~~------~~~~~~p~~~~~~Nv~gt~~l~~~~~----~~~v~~~i~~ss~~~~~~~~~~~~~ 145 (346)
T d1ek6a_ 76 LFKKYSFMAVIHFAGLKAV------GESVQKPLDYYRVNLTGTIQLLEIMK----AHGVKNLVFSSSATVYGNPQYLPLD 145 (346)
T ss_dssp HHHHCCEEEEEECCSCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEEEEGGGGCSCSSSSBC
T ss_pred cccccccccccccccccCc------HhhHhCHHHHHHhhhcccccccchhh----hcCcccccccccceeeecccccccc
Confidence 4444578899999997542 11223345678999999999888864 3455689999887665421
Q ss_pred ----CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecC
Q 020854 201 ----SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATK 244 (320)
Q Consensus 201 ----~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~ 244 (320)
.......|+.+|.+.+...+.++.. ..|.....+.|+.+-.+
T Consensus 146 ~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~ 191 (346)
T d1ek6a_ 146 EAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGA 191 (346)
T ss_dssp TTSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECC
T ss_pred ccccccccCChHHHHHHHHHHHHHHHHHh--ccCCceEEEeecceecc
Confidence 1122457999999999888877653 45788888888877654
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=9.3e-14 Score=123.20 Aligned_cols=190 Identities=12% Similarity=0.072 Sum_probs=126.5
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCe
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV 133 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 133 (320)
|.||||||+|-||.+++++|.++|++|+.+++....-.+. +........+...+.|..+.. + .++
T Consensus 2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~----------~--~~~ 66 (312)
T d2b69a1 2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRN---VEHWIGHENFELINHDVVEPL----------Y--IEV 66 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---TGGGTTCTTEEEEECCTTSCC----------C--CCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHH---HHHhcCCCceEEEehHHHHHH----------H--cCC
Confidence 7899999999999999999999999999998632211110 111111334555555544331 1 157
Q ss_pred EEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC-------------
Q 020854 134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP------------- 200 (320)
Q Consensus 134 d~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~------------- 200 (320)
|+|||.|+.... .. ..++..+.+++|+.|+.++++++.. . +.++|++||.+.+..+
T Consensus 67 d~VihlAa~~~~--~~----~~~~~~~~~~~Nv~g~~~ll~~~~~----~-~~k~I~~SS~~vy~~~~~~~~~e~~~~~~ 135 (312)
T d2b69a1 67 DQIYHLASPASP--PN----YMYNPIKTLKTNTIGTLNMLGLAKR----V-GARLLLASTSEVYGDPEVHPQSEDYWGHV 135 (312)
T ss_dssp SEEEECCSCCSH--HH----HTTCHHHHHHHHHHHHHHHHHHHHH----H-TCEEEEEEEGGGGBSCSSSSBCTTCCCBC
T ss_pred CEEEECcccCCc--hh----HHhCHHHHHHHHHHHHHHHHHHHHH----c-CCcEEEEEChheecCCCCCCCCccccCCC
Confidence 799999997542 11 1112356789999999999988643 2 2479999997665421
Q ss_pred -CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc----------------c-----cC---CCCC
Q 020854 201 -SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI----------------K-----RS---SFFV 255 (320)
Q Consensus 201 -~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~----------------~-----~~---~~~~ 255 (320)
+......|+.||.+.+.+++..+.++ |+++..+.|+.|-.|.... . .+ ....
T Consensus 136 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~ 212 (312)
T d2b69a1 136 NPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAF 212 (312)
T ss_dssp CSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEEC
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHHh---CCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEcc
Confidence 11135679999999999999988774 7999999999887654220 0 00 0123
Q ss_pred CCHHHHHHHHHHHhCCC
Q 020854 256 PSTDVYARAAMRWIGYE 272 (320)
Q Consensus 256 ~~~~~~a~~i~~~l~~~ 272 (320)
...+++++.++..+..+
T Consensus 213 i~v~D~~~~~~~~~~~~ 229 (312)
T d2b69a1 213 QYVSDLVNGLVALMNSN 229 (312)
T ss_dssp EEHHHHHHHHHHHHTSS
T ss_pred EEHHHHHHHHHHHHhhc
Confidence 46778888887777644
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.50 E-value=9.2e-14 Score=123.20 Aligned_cols=200 Identities=14% Similarity=0.018 Sum_probs=133.4
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCe
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV 133 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 133 (320)
|.||||||||.||+.++++|.++|++|+.++|...... ...+.......++.++.+|++|. ....+..... ..
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~--~~~~~~~~~~---~~ 73 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDT--RWRLRELGIEGDIQYEDGDMADA--CSVQRAVIKA---QP 73 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCC--CHHHHHTTCGGGEEEEECCTTCH--HHHHHHHHHH---CC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCccc--HHHHHHhcccCCcEEEEccccCh--HHhhhhhccc---cc
Confidence 78999999999999999999999999999998653211 11122222245689999999986 4444444433 34
Q ss_pred EEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC---------CCCC
Q 020854 134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------SDPL 204 (320)
Q Consensus 134 d~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~---------~~~~ 204 (320)
+++++.|+.... . . ..+.....+++|+.|+.+++.++... ....++++.||..-.... +...
T Consensus 74 ~~~~~~a~~~~~-~--~---~~~~~~~~~~~n~~g~~~~l~~~~~~---~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p 144 (321)
T d1rpna_ 74 QEVYNLAAQSFV-G--A---SWNQPVTTGVVDGLGVTHLLEAIRQF---SPETRFYQASTSEMFGLIQAERQDENTPFYP 144 (321)
T ss_dssp SEEEECCSCCCH-H--H---HTTSHHHHHHHHTHHHHHHHHHHHHH---CTTSEEEEEEEGGGGCSCSSSSBCTTSCCCC
T ss_pred cccccccccccc-c--c---cccchHHHHhhhhhchHHHHHHHHHh---CCCcccccccchhhcCcccCCCCCCCCCccc
Confidence 477888775442 1 1 11224677899999999999887542 223467777665443210 1113
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc-----------------cccC------C---CCCCCH
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS-----------------IKRS------S---FFVPST 258 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~-----------------~~~~------~---~~~~~~ 258 (320)
...|+.||.+.+.+.+.++.+. |+++..+.|+.+..|... ...+ . ......
T Consensus 145 ~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v 221 (321)
T d1rpna_ 145 RSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFA 221 (321)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEH
T ss_pred cChhHHHHHHHHHHHHHHHhhc---CCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEe
Confidence 5789999999999999988774 688888888777666421 0000 0 014678
Q ss_pred HHHHHHHHHHhCCC
Q 020854 259 DVYARAAMRWIGYE 272 (320)
Q Consensus 259 ~~~a~~i~~~l~~~ 272 (320)
+++++.++..+..+
T Consensus 222 ~D~~~~~~~~~~~~ 235 (321)
T d1rpna_ 222 GDYVEAMWLMLQQD 235 (321)
T ss_dssp HHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHhcC
Confidence 88888888887544
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=6.9e-14 Score=118.79 Aligned_cols=187 Identities=14% Similarity=0.129 Sum_probs=129.1
Q ss_pred cccccCCCEEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHH
Q 020854 47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERI 124 (320)
Q Consensus 47 ~~~~~~gk~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~ 124 (320)
.+++.++|+|+||||||.||.+++++|.++|. +|++++|++.+.... . ...+....+|+.+. +.+
T Consensus 8 ~~~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~------~--~~~i~~~~~D~~~~-----~~~ 74 (232)
T d2bkaa1 8 EDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE------A--YKNVNQEVVDFEKL-----DDY 74 (232)
T ss_dssp HHHHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG------G--GGGCEEEECCGGGG-----GGG
T ss_pred HHhCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc------c--cceeeeeeeccccc-----ccc
Confidence 45667789999999999999999999999995 899999976542210 0 23455566676543 344
Q ss_pred HHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCC
Q 020854 125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL 204 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~ 204 (320)
.+.+.. .|++||++|.... ........++|+.++..+++.+.. .+-.++|++||..... ..
T Consensus 75 ~~~~~~--~d~vi~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~a~~----~~v~~fi~~Ss~~~~~----~~ 135 (232)
T d2bkaa1 75 ASAFQG--HDVGFCCLGTTRG---------KAGAEGFVRVDRDYVLKSAELAKA----GGCKHFNLLSSKGADK----SS 135 (232)
T ss_dssp GGGGSS--CSEEEECCCCCHH---------HHHHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCT----TC
T ss_pred cccccc--ccccccccccccc---------ccchhhhhhhcccccceeeecccc----cCccccccCCcccccc----Cc
Confidence 555554 4599999986421 223355678899999998888743 4567899999987754 22
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCc-eEEEEeccceecCCCcc-------------c---cCCCCCCCHHHHHHHHHH
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGI-DVQCQVPLYVATKMASI-------------K---RSSFFVPSTDVYARAAMR 267 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi-~v~~v~PG~v~T~~~~~-------------~---~~~~~~~~~~~~a~~i~~ 267 (320)
...|+.+|...+...+ ..|. ++..+.||.+-.+.... . .......+.+++|+.++.
T Consensus 136 ~~~Y~~~K~~~E~~l~-------~~~~~~~~IlRP~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~ 208 (232)
T d2bkaa1 136 NFLYLQVKGEVEAKVE-------ELKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLN 208 (232)
T ss_dssp SSHHHHHHHHHHHHHH-------TTCCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHH
T ss_pred cchhHHHHHHhhhccc-------cccccceEEecCceeecCCCcCcHHHHHHHHHhhccCCcccCCCeEEHHHHHHHHHH
Confidence 4569999988775543 2344 57888999987764321 0 011123567899998888
Q ss_pred HhCCC
Q 020854 268 WIGYE 272 (320)
Q Consensus 268 ~l~~~ 272 (320)
.+..+
T Consensus 209 ~~~~~ 213 (232)
T d2bkaa1 209 NVVRP 213 (232)
T ss_dssp HHTSC
T ss_pred HHhcC
Confidence 87665
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.48 E-value=1.5e-13 Score=123.43 Aligned_cols=177 Identities=15% Similarity=0.105 Sum_probs=125.0
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
++||.||||||||-||..++++|.++|++|+.++|+..+.....+..+. ...+..+.+|++|. +.+.++.+ .
T Consensus 6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~---~~~i~~~~~Dl~d~--~~l~~~~~---~ 77 (356)
T d1rkxa_ 6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV---ADGMQSEIGDIRDQ--NKLLESIR---E 77 (356)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTT---TTTSEEEECCTTCH--HHHHHHHH---H
T ss_pred hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhc---ccCCeEEEeeccCh--Hhhhhhhh---h
Confidence 5699999999999999999999999999999999987654433322211 34588899999986 44444333 3
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC----------
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------- 200 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~---------- 200 (320)
.++|+++|.|+.... ..+.+..+..+++|+.|+.++++++... .....++..||......+
T Consensus 78 ~~~~~v~~~aa~~~~------~~~~~~~~~~~~~Nv~g~~n~l~~~~~~---~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 148 (356)
T d1rkxa_ 78 FQPEIVFHMAAQPLV------RLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYRENE 148 (356)
T ss_dssp HCCSEEEECCSCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCTTS
T ss_pred chhhhhhhhhccccc------cccccCCccccccccccchhhhhhhhcc---cccccccccccccccccccccccccccc
Confidence 346699999986543 2223445678899999999999987642 234456666655444311
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHc------cCCceEEEEeccceecC
Q 020854 201 SDPLYSVYAATKAYIDQFSRSLYVEYR------KSGIDVQCQVPLYVATK 244 (320)
Q Consensus 201 ~~~~~~~Y~asKaal~~~~~~l~~el~------~~gi~v~~v~PG~v~T~ 244 (320)
+......|+.+|.+.+.+.+..+.++. ..++.+..+.|+.+-.|
T Consensus 149 ~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp 198 (356)
T d1rkxa_ 149 AMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGG 198 (356)
T ss_dssp CBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECT
T ss_pred ccCCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCC
Confidence 111246799999999999999888753 34678888888766543
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.48 E-value=1.9e-13 Score=120.89 Aligned_cols=154 Identities=13% Similarity=0.136 Sum_probs=112.3
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
-|.||||||+|-||.+++++|+++|+.|+++++..+ +|+.+. +.++++.+. .+
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~----------------------~~~~~~--~~~~~~~~~---~~ 54 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE----------------------LNLLDS--RAVHDFFAS---ER 54 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT----------------------CCTTCH--HHHHHHHHH---HC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh----------------------ccccCH--HHHHHHHhh---cC
Confidence 367999999999999999999999998887654321 356654 444444442 24
Q ss_pred eEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC------------
Q 020854 133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP------------ 200 (320)
Q Consensus 133 id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~------------ 200 (320)
+|.++|.|+.... . ........+.+++|+.|+.++++++.. .+-.++|++||.+.+..+
T Consensus 55 ~d~v~~~a~~~~~--~---~~~~~~~~~~~~~Nv~gt~~ll~~a~~----~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~ 125 (315)
T d1e6ua_ 55 IDQVYLAAAKVGG--I---VANNTYPADFIYQNMMIESNIIHAAHQ----NDVNKLLFLGSSCIYPKLAKQPMAESELLQ 125 (315)
T ss_dssp CSEEEECCCCCCC--H---HHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGGSCTTCCSSBCGGGTTS
T ss_pred CCEEEEcchhccc--c---ccchhhHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEECCceEcCCCCCCCccCCcccc
Confidence 6699999976542 1 112233456678999999999888754 345689999998876421
Q ss_pred --CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCC
Q 020854 201 --SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKM 245 (320)
Q Consensus 201 --~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~ 245 (320)
+.+....|+.||.+.+.+++.+..+. |+++..+.|+.|-.|.
T Consensus 126 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyGp~ 169 (315)
T d1e6ua_ 126 GTLEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPH 169 (315)
T ss_dssp SCCCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCC
Confidence 11224579999999999999998775 7999999999887653
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.44 E-value=8.4e-13 Score=118.05 Aligned_cols=191 Identities=14% Similarity=0.102 Sum_probs=132.1
Q ss_pred EEEEECCCCcHHHHHHHHHHHcC-CeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCe
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV 133 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G-~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 133 (320)
.||||||||-||..++++|+++| ++|+.+++..+...... ...++.++.+|+++.. +..+.+. . ++
T Consensus 2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~-------~~~~~~~i~~Di~~~~-~~~~~~~---~--~~ 68 (342)
T d2blla1 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDISIHS-EWIEYHV---K--KC 68 (342)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-------TCTTEEEEECCTTTCS-HHHHHHH---H--HC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc-------cCCCeEEEECccCChH-HHHHHHH---h--CC
Confidence 48999999999999999999999 58999988655433221 1457899999998761 2222222 2 35
Q ss_pred EEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCC------------
Q 020854 134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS------------ 201 (320)
Q Consensus 134 d~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~------------ 201 (320)
|+|||+|+..... ...+.....+++|+.|+.++++.+.. . +.+++++||......+.
T Consensus 69 d~Vih~a~~~~~~------~~~~~~~~~~~~nv~gt~~ll~~~~~----~-~~~~~~~ss~~~~~~~~~~~~~~~~~~~~ 137 (342)
T d2blla1 69 DVVLPLVAIATPI------EYTRNPLRVFELDFEENLRIIRYCVK----Y-RKRIIFPSTSEVYGMCSDKYFDEDHSNLI 137 (342)
T ss_dssp SEEEECBCCCCHH------HHHHSHHHHHHHHTHHHHHHHHHHHH----T-TCEEEEECCGGGGBTCCCSSBCTTTCCCB
T ss_pred Ccccccccccccc------ccccCCcccccccccccccccccccc----c-ccccccccccccccccccccccccccccc
Confidence 6999999976531 12233456789999999999999744 2 34567777766544211
Q ss_pred ----CCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc----------------------c------
Q 020854 202 ----DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI----------------------K------ 249 (320)
Q Consensus 202 ----~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~----------------------~------ 249 (320)
......|+.||.+.+.+++..+... |+++..+.|+.+-.+-... .
T Consensus 138 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 214 (342)
T d2blla1 138 VGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLID 214 (342)
T ss_dssp CCCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGG
T ss_pred ccccCCCcchhhhcccchhhhhhhhhccc---CceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccC
Confidence 1124679999999999999988775 7888888887776552110 0
Q ss_pred --cCCCCCCCHHHHHHHHHHHhCCC
Q 020854 250 --RSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 250 --~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
.........+++++.+...+..+
T Consensus 215 ~g~~~r~~i~v~D~~~a~~~~~~~~ 239 (342)
T d2blla1 215 GGKQKRCFTDIRDGIEALYRIIENA 239 (342)
T ss_dssp GSCCEEECEEHHHHHHHHHHHHHCG
T ss_pred CCCeeeeecccccccceeeeehhhc
Confidence 00112568889999999888653
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.40 E-value=2.1e-12 Score=108.68 Aligned_cols=195 Identities=14% Similarity=0.048 Sum_probs=122.9
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCe--EEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLN--LVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~--Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
++||||||||.||+++++.|+++|++ |+...|++++.+.. ...+..+.+|..+. +.+.+.+..
T Consensus 4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~---------~~~~~~~~~d~~~~-----~~~~~~~~~- 68 (252)
T d2q46a1 4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI---------GGEADVFIGDITDA-----DSINPAFQG- 68 (252)
T ss_dssp CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT---------TCCTTEEECCTTSH-----HHHHHHHTT-
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc---------cCCcEEEEeeeccc-----ccccccccc-
Confidence 68999999999999999999999975 56677888765432 34567888998876 334444554
Q ss_pred CeEEEEEccCCCCCccc-------cccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCC
Q 020854 132 DVGVLINNVGISYPYAR-------FFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL 204 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~-------~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~ 204 (320)
+|.+||+|+....... ...............+|+.++..+....... ..++....|+...... ..+.
T Consensus 69 -~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~s~~~~~~~-~~~~ 142 (252)
T d2q46a1 69 -IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA----GVKHIVVVGSMGGTNP-DHPL 142 (252)
T ss_dssp -CSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH----TCSEEEEEEETTTTCT-TCGG
T ss_pred -ceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccc----cccccccccccccCCC-Cccc
Confidence 4599999987542111 0111111223455678999988887766543 4567888877666542 1222
Q ss_pred chhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc-----------ccCCCCCCCHHHHHHHHHHHhCCC
Q 020854 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI-----------KRSSFFVPSTDVYARAAMRWIGYE 272 (320)
Q Consensus 205 ~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~-----------~~~~~~~~~~~~~a~~i~~~l~~~ 272 (320)
...+...+.......+.+. ...|+++..+.||.+-.+.... .......++.+++|+.++..+..+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~a~~~~l~~~ 218 (252)
T d2q46a1 143 NKLGNGNILVWKRKAEQYL---ADSGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFE 218 (252)
T ss_dssp GGGGGCCHHHHHHHHHHHH---HHSSSCEEEEEECEEECSCTTSSCEEEESTTGGGGSSCCEEEHHHHHHHHHHHTTCG
T ss_pred ccccccchhhhhhhhhhhh---hcccccceeecceEEECCCcchhhhhhccCcccccCCCCeEEHHHHHHHHHHHhCCc
Confidence 2222222222222222222 2468999999999886664331 112223567899999999998754
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.40 E-value=3.9e-12 Score=112.87 Aligned_cols=154 Identities=16% Similarity=0.094 Sum_probs=104.9
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH-HHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCe
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP-DKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV 133 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 133 (320)
.||||||+|-||..++++|.++|++|+.+++-. ....+..+.+.. ..++.++.+|+.|. +.++++.+.. ++
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~---~~~~~~i~~Di~~~--~~l~~~~~~~---~~ 73 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS---LGNFEFVHGDIRNK--NDVTRLITKY---MP 73 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT---TCCCEEEECCTTCH--HHHHHHHHHH---CC
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhc---cCCcEEEEcccCCH--HHHHHHHHhc---CC
Confidence 489999999999999999999999999987421 111122222322 45678899999886 4444444433 46
Q ss_pred EEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCC------------
Q 020854 134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS------------ 201 (320)
Q Consensus 134 d~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~------------ 201 (320)
|+|||.|+.... ....++....+++|+.|+.++++++... +..+.++.||.......+
T Consensus 74 d~Vih~aa~~~~------~~~~~~~~~~~~~Nv~gt~nll~~~~~~----~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~ 143 (338)
T d1orra_ 74 DSCFHLAGQVAM------TTSIDNPCMDFEINVGGTLNLLEAVRQY----NSNCNIIYSSTNKVYGDLEQYKYNETETRY 143 (338)
T ss_dssp SEEEECCCCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEEEEGGGGTTCTTSCEEECSSCE
T ss_pred ceEEeecccccc------cccccChHHHHHHHHHHHHHHHHhhhcc----cccccccccccccccccccccccccccccc
Confidence 799999987543 1122334678899999999999987542 334455555544433110
Q ss_pred --------------CCCchhhHHHHHHHHHHHHHHHHHH
Q 020854 202 --------------DPLYSVYAATKAYIDQFSRSLYVEY 226 (320)
Q Consensus 202 --------------~~~~~~Y~asKaal~~~~~~l~~el 226 (320)
......|+.+|...+.+.......+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~ 182 (338)
T d1orra_ 144 TCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF 182 (338)
T ss_dssp EETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccCcccCCccccccccccccchhhhhhhhhhhcc
Confidence 1125679999999999988888775
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.37 E-value=2.9e-12 Score=115.53 Aligned_cols=167 Identities=12% Similarity=0.010 Sum_probs=118.3
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
++..||||||||-||..++++|.++|++|+.+++...+... .. .....+..+|+.+. +++.+.+..
T Consensus 14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~------~~--~~~~~~~~~D~~~~-----~~~~~~~~~- 79 (363)
T d2c5aa1 14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT------ED--MFCDEFHLVDLRVM-----ENCLKVTEG- 79 (363)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC------GG--GTCSEEEECCTTSH-----HHHHHHHTT-
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh------hh--cccCcEEEeechhH-----HHHHHHhhc-
Confidence 46679999999999999999999999999999875432100 00 12234566677654 344444444
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCC----------
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS---------- 201 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~---------- 201 (320)
+|.+||.|+..... ..+.+.....+.+|+.++.+++.++.. .+..++|++||........
T Consensus 80 -~d~Vih~a~~~~~~-----~~~~~~~~~~~~~n~~gt~~ll~~~~~----~~vk~~i~~SS~~~~~~~~~~~~~~~~~~ 149 (363)
T d2c5aa1 80 -VDHVFNLAADMGGM-----GFIQSNHSVIMYNNTMISFNMIEAARI----NGIKRFFYASSACIYPEFKQLETTNVSLK 149 (363)
T ss_dssp -CSEEEECCCCCCCH-----HHHTTCHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEEEEGGGSCGGGSSSSSSCEEC
T ss_pred -CCeEeecccccccc-----cccccccccccccccchhhHHHHhHHh----hCccccccccccccccccccccccccccc
Confidence 55999999876531 111223466778999999999988754 4456899999977754210
Q ss_pred ------CCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCC
Q 020854 202 ------DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKM 245 (320)
Q Consensus 202 ------~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~ 245 (320)
......|+.||.+.+.+++....++ |+++..+.|+.+-.+-
T Consensus 150 ~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyG~~ 196 (363)
T d2c5aa1 150 ESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPF 196 (363)
T ss_dssp GGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTT
T ss_pred cccCCcCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEeccC
Confidence 1124579999999999999888775 7899999998887654
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.36 E-value=1.5e-12 Score=116.79 Aligned_cols=171 Identities=14% Similarity=0.059 Sum_probs=114.2
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
.|.||||||||-||..++++|.++|++|.+++++...-......+ ....+.++.++.+|+.|. +.+.+.+...+
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~-~~~~~~~i~~~~~Di~d~-----~~~~~~~~~~~ 75 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANL-EAILGDRVELVVGDIADA-----ELVDKLAAKAD 75 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGT-GGGCSSSEEEEECCTTCH-----HHHHHHHTTCS
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHH-HHhhcCCeEEEEccCCCH-----HHHHHHHhhhh
Confidence 467999999999999999999999987655554310000000000 011245788999999875 33444444444
Q ss_pred eEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC------------
Q 020854 133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP------------ 200 (320)
Q Consensus 133 id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~------------ 200 (320)
.++|.|+..... ...++....+++|+.|+.+++..+... +.++|++||.+.+...
T Consensus 76 --~v~~~a~~~~~~------~~~~~~~~~~~~N~~g~~nll~~~~~~-----~~k~i~~ss~~vyg~~~~~~~~~~~~~~ 142 (346)
T d1oc2a_ 76 --AIVHYAAESHND------NSLNDPSPFIHTNFIGTYTLLEAARKY-----DIRFHHVSTDEVYGDLPLREDLPGHGEG 142 (346)
T ss_dssp --EEEECCSCCCHH------HHHHCCHHHHHHHTHHHHHHHHHHHHH-----TCEEEEEEEGGGGCCBCCGGGSTTTTCS
T ss_pred --hhhhhhhccccc------chhhCcccceeeehHhHHhhhhhhccc-----cccccccccceEecccCccccccccccC
Confidence 788888875431 112223567899999999999876543 2467777776654210
Q ss_pred ---------CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCC
Q 020854 201 ---------SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKM 245 (320)
Q Consensus 201 ---------~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~ 245 (320)
+....+.|+.+|.+.+.+++....+. |+++.++.|+.+-.|-
T Consensus 143 ~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~vyGp~ 193 (346)
T d1oc2a_ 143 PGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPY 193 (346)
T ss_dssp TTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTT
T ss_pred cccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCEEEEeecceeCCC
Confidence 01123679999999999999888764 8999999999887753
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.35 E-value=4.7e-11 Score=108.23 Aligned_cols=178 Identities=19% Similarity=0.167 Sum_probs=125.7
Q ss_pred CCEEEEECCCCcHHHHHHHHHHH-cCCeEEEEeC---------CHHHHHHHHHHHHhh------cCCceEEEEEEeCCCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAK-TGLNLVLVGR---------NPDKLKDVSDSIQAK------YAKTQIKSVVVDFSGD 116 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~-~G~~Vil~~r---------~~~~~~~~~~~l~~~------~~~~~~~~~~~D~~~~ 116 (320)
+..||||||+|-||..++++|++ .|++|+++|+ ..+..+.....+... ..+..+.++.+|++|.
T Consensus 2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~ 81 (383)
T d1gy8a_ 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (383)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence 44699999999999999999986 6899999874 112223333333221 1234678889999986
Q ss_pred cHHHHHHHHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccc
Q 020854 117 LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAA 196 (320)
Q Consensus 117 ~~~~~~~~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~ 196 (320)
+.++++.+.... +|+|+|.|+.... ....+.....+++|+.++..++.++.. .+..++++++|...
T Consensus 82 --~~l~~~~~~~~~--~d~ViH~Aa~~~~------~~~~~~~~~~~~~N~~~t~~~l~~~~~----~~~~~~~~~~s~~~ 147 (383)
T d1gy8a_ 82 --DFLNGVFTRHGP--IDAVVHMCAFLAV------GESVRDPLKYYDNNVVGILRLLQAMLL----HKCDKIIFSSSAAI 147 (383)
T ss_dssp --HHHHHHHHHSCC--CCEEEECCCCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGG
T ss_pred --HHhhhhhhccce--eehhhcccccccc------cccccccccccccccccccccchhhhc----cCCccccccccccc
Confidence 666666666554 5699999997653 112233456778999999999888753 45567777777665
Q ss_pred cccC----------------CCCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc
Q 020854 197 IVIP----------------SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS 247 (320)
Q Consensus 197 ~~~~----------------~~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~ 247 (320)
.... +......|+.||.+.+.+++.+... .|+++.++.|+.+-.|...
T Consensus 148 ~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~gl~~~~lR~~~vyG~~~~ 211 (383)
T d1gy8a_ 148 FGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEA---YGIKGICLRYFNACGAHED 211 (383)
T ss_dssp TBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECEEECCCTT
T ss_pred ccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHH---hCCCEEEEecceeeccCcc
Confidence 4310 1122577999999999999888776 4799999999998776654
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.33 E-value=4.1e-12 Score=112.69 Aligned_cols=196 Identities=19% Similarity=0.118 Sum_probs=129.8
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEE------EEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLV------LVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vi------l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
.||||||+|-||..++++|+++|++|. ..+....... ...+........+.++..|..+. . ......
T Consensus 2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~--~---~~~~~~ 74 (322)
T d1r6da_ 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGN--RANLAPVDADPRLRFVHGDIRDA--G---LLAREL 74 (322)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCC--GGGGGGGTTCTTEEEEECCTTCH--H---HHHHHT
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCcccc--HhHhhhhhcCCCeEEEEeccccc--h---hhhccc
Confidence 489999999999999999999997544 3332110000 00011111255788999998875 2 222333
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCC-------
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS------- 201 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~------- 201 (320)
. ++|.++|.|+.... ....+.....+++|+.|+.++++.+.. .+..++|++||.+....+.
T Consensus 75 ~--~~d~vi~~a~~~~~------~~~~~~~~~~~~~N~~gt~~ll~~~~~----~~~~~~I~~Ss~~~yg~~~~~~~~E~ 142 (322)
T d1r6da_ 75 R--GVDAIVHFAAESHV------DRSIAGASVFTETNVQGTQTLLQCAVD----AGVGRVVHVSTNQVYGSIDSGSWTES 142 (322)
T ss_dssp T--TCCEEEECCSCCCH------HHHHHCCHHHHHHHTHHHHHHHHHHHH----TTCCEEEEEEEGGGGCCCSSSCBCTT
T ss_pred c--ccceEEeecccccc------cccccchHHHhhhhHHHHHHHHHHHHH----cCCceEEEeecceeecCCCCCCCCCC
Confidence 3 46699999987543 122333466778999999999998753 4457899999987754210
Q ss_pred --CCCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc--------------c-----cCCC---CCCC
Q 020854 202 --DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI--------------K-----RSSF---FVPS 257 (320)
Q Consensus 202 --~~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~--------------~-----~~~~---~~~~ 257 (320)
......|+.||.+.+.+.+.++++. |+++..+.|+.+-.|-... . .++. ....
T Consensus 143 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~ 219 (322)
T d1r6da_ 143 SPLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVH 219 (322)
T ss_dssp SCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEE
Confidence 1124679999999999999998774 7999999999887653210 0 0000 1346
Q ss_pred HHHHHHHHHHHhCCC
Q 020854 258 TDVYARAAMRWIGYE 272 (320)
Q Consensus 258 ~~~~a~~i~~~l~~~ 272 (320)
.+++|+.+...+..+
T Consensus 220 v~D~a~ai~~~~~~~ 234 (322)
T d1r6da_ 220 TDDHCRGIALVLAGG 234 (322)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCC
Confidence 778888877777654
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.20 E-value=1.3e-11 Score=102.85 Aligned_cols=177 Identities=12% Similarity=0.080 Sum_probs=115.3
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|.++||||||.||+.++++|.++|+ +|+..+|+.... ..++ ..+..|. .++.+.+..
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~------------~~~~---~~~~~d~-----~~~~~~~~~ 61 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE------------HPRL---DNPVGPL-----AELLPQLDG 61 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC------------CTTE---ECCBSCH-----HHHGGGCCS
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh------------cccc---cccccch-----hhhhhcccc
Confidence 48899999999999999999999997 577777754210 1122 2222221 223333222
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHH
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA 210 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~a 210 (320)
.+|.+|+++|..... ..+ -+...++|+.++..+++.+. +.+-.+++++||..+.. .....|..
T Consensus 62 -~~d~vi~~~g~~~~~-----~~~---~~~~~~~~~~~~~~~~~~a~----~~~v~~~i~~Ss~~~~~----~~~~~y~~ 124 (212)
T d2a35a1 62 -SIDTAFCCLGTTIKE-----AGS---EEAFRAVDFDLPLAVGKRAL----EMGARHYLVVSALGADA----KSSIFYNR 124 (212)
T ss_dssp -CCSEEEECCCCCHHH-----HSS---HHHHHHHHTHHHHHHHHHHH----HTTCCEEEEECCTTCCT----TCSSHHHH
T ss_pred -chheeeeeeeeeccc-----ccc---ccccccchhhhhhhcccccc----ccccccccccccccccc----ccccchhH
Confidence 467999999865321 111 24567889999998888763 45667899999977654 33567999
Q ss_pred HHHHHHHHHHHHHHHHccCCc-eEEEEeccceecCCCccc----cCC---------CCCCCHHHHHHHHHHHhCCCC
Q 020854 211 TKAYIDQFSRSLYVEYRKSGI-DVQCQVPLYVATKMASIK----RSS---------FFVPSTDVYARAAMRWIGYEP 273 (320)
Q Consensus 211 sKaal~~~~~~l~~el~~~gi-~v~~v~PG~v~T~~~~~~----~~~---------~~~~~~~~~a~~i~~~l~~~~ 273 (320)
+|...+...+ ..+. +...+.|+.+-.+..... ... ......+++|+.++..+..+.
T Consensus 125 ~K~~~E~~l~-------~~~~~~~~I~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~~ 194 (212)
T d2a35a1 125 VKGELEQALQ-------EQGWPQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEACDLARALWRLALEEG 194 (212)
T ss_dssp HHHHHHHHHT-------TSCCSEEEEEECCSEESTTSCEEGGGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHhhhcc-------ccccccceeeCCcceeCCcccccHHHHHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCCC
Confidence 9987765443 3343 578889999876643310 000 012466889999988887663
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.06 E-value=3.5e-10 Score=98.57 Aligned_cols=183 Identities=13% Similarity=0.006 Sum_probs=106.3
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV-SDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~-~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
++||||||||.||+.++++|.++|++|++++|+....... .+.+.. .....+..+.+|+.|. +.+.+.+...+
T Consensus 4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~-~~~~~v~~v~~d~~d~-----~~~~~~~~~~~ 77 (312)
T d1qyda_ 4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLY-FKQLGAKLIEASLDDH-----QRLVDALKQVD 77 (312)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHH-HHTTTCEEECCCSSCH-----HHHHHHHTTCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhh-hccCCcEEEEeecccc-----hhhhhhccCcc
Confidence 4499999999999999999999999999999975432111 111111 1144577888999875 44455555545
Q ss_pred eEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC---CCCCchhhH
Q 020854 133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---SDPLYSVYA 209 (320)
Q Consensus 133 id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~---~~~~~~~Y~ 209 (320)
.++++++.... . .|..+...++..+ .+....+++..||....... +......|.
T Consensus 78 --~~~~~~~~~~~---~--------------~~~~~~~~~l~~a----~~~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~ 134 (312)
T d1qyda_ 78 --VVISALAGGVL---S--------------HHILEQLKLVEAI----KEAGNIKRFLPSEFGMDPDIMEHALQPGSITF 134 (312)
T ss_dssp --EEEECCCCSSS---S--------------TTTTTHHHHHHHH----HHSCCCSEEECSCCSSCTTSCCCCCSSTTHHH
T ss_pred --hhhhhhhhccc---c--------------cchhhhhHHHHHH----HHhcCCcEEEEeeccccCCCcccccchhhhhh
Confidence 78887765332 0 1122222233332 23445667777775443211 112233455
Q ss_pred HHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCc------------c--------ccCCCCCCCHHHHHHHHHHHh
Q 020854 210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMAS------------I--------KRSSFFVPSTDVYARAAMRWI 269 (320)
Q Consensus 210 asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~------------~--------~~~~~~~~~~~~~a~~i~~~l 269 (320)
.+|.....+ . ...|+.+..+.||.+-.+... . ......+...+++|+.++..+
T Consensus 135 ~~~~~~~~~----~---~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l 207 (312)
T d1qyda_ 135 IDKRKVRRA----I---EAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSI 207 (312)
T ss_dssp HHHHHHHHH----H---HHTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHT
T ss_pred HHHHHHHHh----h---cccccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHh
Confidence 555444332 2 235778888888876432111 0 011122568899999999998
Q ss_pred CCC
Q 020854 270 GYE 272 (320)
Q Consensus 270 ~~~ 272 (320)
..+
T Consensus 208 ~~~ 210 (312)
T d1qyda_ 208 DDP 210 (312)
T ss_dssp TCG
T ss_pred cCc
Confidence 654
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=98.98 E-value=1.9e-09 Score=92.69 Aligned_cols=172 Identities=16% Similarity=0.122 Sum_probs=111.3
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeE
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG 134 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 134 (320)
.+|||||||.||..++++|.++|++|+.++|+. +|+.|. +.++++.+. .++|
T Consensus 3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~-----------------------~D~~d~--~~~~~~l~~---~~~d 54 (281)
T d1vl0a_ 3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD-----------------------LDITNV--LAVNKFFNE---KKPN 54 (281)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-----------------------CCTTCH--HHHHHHHHH---HCCS
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh-----------------------ccCCCH--HHHHHHHHH---cCCC
Confidence 489999999999999999999999999999863 356654 444444443 3467
Q ss_pred EEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC---------CCCCc
Q 020854 135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------SDPLY 205 (320)
Q Consensus 135 ~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~---------~~~~~ 205 (320)
+|||.|+.... +......+..+..|......+....... ...++..||......+ +....
T Consensus 55 ~vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~~~~~~~~~-----~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~ 123 (281)
T d1vl0a_ 55 VVINCAAHTAV------DKCEEQYDLAYKINAIGPKNLAAAAYSV-----GAEIVQISTDYVFDGEAKEPITEFDEVNPQ 123 (281)
T ss_dssp EEEECCCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHH-----TCEEEEEEEGGGSCSCCSSCBCTTSCCCCC
T ss_pred EEEeecccccc------ccccccchhhcccccccccccccccccc-----cccccccccceeeeccccccccccccccch
Confidence 99999886542 1122233556678888887776665442 3456666665443311 11235
Q ss_pred hhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecCCCcc-----------------ccCCCCCCCHHHHHHHHHHH
Q 020854 206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKMASI-----------------KRSSFFVPSTDVYARAAMRW 268 (320)
Q Consensus 206 ~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~~~~-----------------~~~~~~~~~~~~~a~~i~~~ 268 (320)
..|+.+|.+.+.+.+. .+.+...+.|+.+-.+-... ..........+++++.+...
T Consensus 124 ~~~~~~k~~~e~~~~~-------~~~~~~i~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~ 196 (281)
T d1vl0a_ 124 SAYGKTKLEGENFVKA-------LNPKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKV 196 (281)
T ss_dssp SHHHHHHHHHHHHHHH-------HCSSEEEEEECSEESSSSCHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHH
T ss_pred hhhhhhhhHHHHHHHH-------hCCCccccceeEEeCCCcccccchhhhhccCCceeecCCceeccchhhhhhhhhhhh
Confidence 6799999887766533 35678889999886553220 00111245777888877777
Q ss_pred hCCC
Q 020854 269 IGYE 272 (320)
Q Consensus 269 l~~~ 272 (320)
++..
T Consensus 197 ~~~~ 200 (281)
T d1vl0a_ 197 IDEK 200 (281)
T ss_dssp HHHT
T ss_pred hhhc
Confidence 7554
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.94 E-value=3.1e-14 Score=117.13 Aligned_cols=172 Identities=13% Similarity=0.067 Sum_probs=93.6
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEe----------CCCCcHHHHHHH
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD----------FSGDLDEGVERI 124 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D----------~~~~~~~~~~~~ 124 (320)
++.|+||+|+||+++|+.|++.|++|++.+|++++++++.+++..............+ .........+..
T Consensus 2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (212)
T d1jaya_ 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPWEHAIDTA 81 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSCHHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEeeccccccchhhhhhhheeeeccchHH
Confidence 3678899999999999999999999999999999999999999876544433322111 111111111211
Q ss_pred HHHH--cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCC
Q 020854 125 KEAI--EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD 202 (320)
Q Consensus 125 ~~~~--~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~ 202 (320)
.... .... ............ ..... ..+...+.+...+.+........+++.|..... ..
T Consensus 82 ~~~~~~~~~~-~~~~~~~~~~~~-~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 143 (212)
T d1jaya_ 82 RDLKNILREK-IVVSPLVPVSRG-AKGFT--------------YSSERSAAEIVAEVLESEKVVSALHTIPAARFA--NL 143 (212)
T ss_dssp HHTHHHHTTS-EEEECCCCEECC-TTCCE--------------ECCSSCHHHHHHHHHTCSCEEECCTTCCHHHHH--CT
T ss_pred HHhhhhhccc-cccccccccccc-ccccc--------------ccccchhhhhhhhhhhhhcccccceeecHHHhc--Cc
Confidence 1111 1111 011111111110 00000 000000112222233333334444444444433 22
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecC
Q 020854 203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATK 244 (320)
Q Consensus 203 ~~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~ 244 (320)
.....|..++++....++..+.++..+++.++.++||.+++.
T Consensus 144 ~~~~~~~~~~a~~~~~a~~~~~~~~~~~~g~~~~~~G~l~~a 185 (212)
T d1jaya_ 144 DEKFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDAGPLSNS 185 (212)
T ss_dssp TCCCCEEEEEEESCHHHHHHHHHHHHHSTTEEEEEEESGGGH
T ss_pred ccccCccceEEeCCHHHHHHHHHHHhhCCCeEEEEeChHHHH
Confidence 334456666666777777777777777889999999988763
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=98.88 E-value=1.4e-09 Score=94.09 Aligned_cols=130 Identities=18% Similarity=0.185 Sum_probs=85.7
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeE
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG 134 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 134 (320)
.+|||||+|-||.+++++|.++|. ++.++++... +..|++|. +.++++.+. .++|
T Consensus 2 KILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~-------------------~~~Dl~~~--~~~~~~i~~---~~~D 56 (298)
T d1n2sa_ 2 NILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKE-------------------FCGDFSNP--KGVAETVRK---LRPD 56 (298)
T ss_dssp EEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCSS-------------------SCCCTTCH--HHHHHHHHH---HCCS
T ss_pred EEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCcc-------------------ccCcCCCH--HHHHHHHHH---cCCC
Confidence 489999999999999999999986 5555544321 23577665 444444433 3477
Q ss_pred EEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccC---------CCCCc
Q 020854 135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------SDPLY 205 (320)
Q Consensus 135 ~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~---------~~~~~ 205 (320)
+|||.||.... .. .... -...+++|..++..+..++. ..+.+++++||......+ +....
T Consensus 57 ~Vih~Aa~~~~--~~-~~~~---~~~~~~~n~~~~~~l~~~~~-----~~~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~ 125 (298)
T d1n2sa_ 57 VIVNAAAHTAV--DK-AESE---PELAQLLNATSVEAIAKAAN-----ETGAWVVHYSTDYVFPGTGDIPWQETDATSPL 125 (298)
T ss_dssp EEEECCCCCCH--HH-HTTC---HHHHHHHHTHHHHHHHHHHT-----TTTCEEEEEEEGGGSCCCTTCCBCTTSCCCCS
T ss_pred EEEEecccccc--cc-cccC---ccccccccccccccchhhhh-----ccccccccccccccccCCCCCCCccccccCCC
Confidence 99999997643 11 1122 25667899999999988863 234678888876654321 11124
Q ss_pred hhhHHHHHHHHHHHH
Q 020854 206 SVYAATKAYIDQFSR 220 (320)
Q Consensus 206 ~~Y~asKaal~~~~~ 220 (320)
..|+.+|.+.+.+.+
T Consensus 126 ~~y~~~k~~~e~~~~ 140 (298)
T d1n2sa_ 126 NVYGKTKLAGEKALQ 140 (298)
T ss_dssp SHHHHHHHHHHHHHH
T ss_pred chHhhhhhhhhhhHH
Confidence 679999988776654
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=98.85 E-value=3.9e-08 Score=87.39 Aligned_cols=153 Identities=13% Similarity=0.033 Sum_probs=96.2
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
+.|+++||||||.||.+++++|.++|++|+++.|+.++... +.+.. ...+..+..|+.|.. + .+.+.+...
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~~---~~~v~~~~gD~~d~~-~---~~~~a~~~~ 72 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQA---IPNVTLFQGPLLNNV-P---LMDTLFEGA 72 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHT---STTEEEEESCCTTCH-H---HHHHHHTTC
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhcc---cCCCEEEEeeCCCcH-H---HHHHHhcCC
Confidence 46899999999999999999999999999999998766432 22222 345788899998761 2 233344554
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHHH
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAAT 211 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~as 211 (320)
+ .++.+...... . |+....+++.++. +.+..+++..||.......+......|..+
T Consensus 73 ~--~~~~~~~~~~~--------~----------~~~~~~~~~~aa~----~agv~~~v~~Ss~~~~~~~~~~~~~~~~~~ 128 (350)
T d1xgka_ 73 H--LAFINTTSQAG--------D----------EIAIGKDLADAAK----RAGTIQHYIYSSMPDHSLYGPWPAVPMWAP 128 (350)
T ss_dssp S--EEEECCCSTTS--------C----------HHHHHHHHHHHHH----HHSCCSEEEEEECCCGGGTSSCCCCTTTHH
T ss_pred c--eEEeecccccc--------h----------hhhhhhHHHHHHH----HhCCCceEEEeeccccccCCcccchhhhhh
Confidence 5 55555432111 1 1222233444432 334456777888665443233344567788
Q ss_pred HHHHHHHHHHHHHHHccCCceEEEEeccceecC
Q 020854 212 KAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATK 244 (320)
Q Consensus 212 Kaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~ 244 (320)
|.....+.+ ..++....+.||.+..+
T Consensus 129 k~~~~~~~~-------~~~~~~~~vr~~~~~~~ 154 (350)
T d1xgka_ 129 KFTVENYVR-------QLGLPSTFVYAGIYNNN 154 (350)
T ss_dssp HHHHHHHHH-------TSSSCEEEEEECEEGGG
T ss_pred HHHHHHHHH-------hhccCceeeeeceeecc
Confidence 876665543 34678888888876544
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=98.80 E-value=1.9e-08 Score=86.63 Aligned_cols=182 Identities=15% Similarity=0.078 Sum_probs=103.7
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHH--HHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK--DVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|.||||||||.||++++++|.+.|++|++++|+..... +....+.... ...+..+..|+.+. ....+.+..
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~-----~~~~~~~~~ 76 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK-ASGANIVHGSIDDH-----ASLVEAVKN 76 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH-TTTCEEECCCTTCH-----HHHHHHHHT
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhc-cCCcEEEEeecccc-----hhhhhhhhh
Confidence 367999999999999999999999999999999754321 1112222211 33466777888765 233344444
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCCCCCchhhHH
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA 210 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~~~~~~~Y~a 210 (320)
.+ .++++++.... . +...+.+++ ...+..++++.||..... .......+..
T Consensus 77 ~~--~vi~~~~~~~~------~---------------~~~~~~~a~----~~~~~~~~~~~s~~~~~~--~~~~~~~~~~ 127 (307)
T d1qyca_ 77 VD--VVISTVGSLQI------E---------------SQVNIIKAI----KEVGTVKRFFPSEFGNDV--DNVHAVEPAK 127 (307)
T ss_dssp CS--EEEECCCGGGS------G---------------GGHHHHHHH----HHHCCCSEEECSCCSSCT--TSCCCCTTHH
T ss_pred ce--eeeeccccccc------c---------------hhhHHHHHH----HHhccccceeeecccccc--cccccccccc
Confidence 44 88888875422 0 111122222 223445677777754433 2222223333
Q ss_pred HHHHHHHHHHHHHHHHccCCceEEEEeccceecCC----Cc---c------------ccCCCCCCCHHHHHHHHHHHhCC
Q 020854 211 TKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATKM----AS---I------------KRSSFFVPSTDVYARAAMRWIGY 271 (320)
Q Consensus 211 sKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~~----~~---~------------~~~~~~~~~~~~~a~~i~~~l~~ 271 (320)
.+.......+.... ..|+....+.|+.+-.+. .. . ......+...+++|+.++..+..
T Consensus 128 ~~~~~~~~~~~~~~---~~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~ 204 (307)
T d1qyca_ 128 SVFEVKAKVRRAIE---AEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDD 204 (307)
T ss_dssp HHHHHHHHHHHHHH---HHTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSC
T ss_pred ccccccccccchhh---ccCCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcC
Confidence 33333333333222 346788888887764332 11 0 01112256899999999988865
Q ss_pred C
Q 020854 272 E 272 (320)
Q Consensus 272 ~ 272 (320)
+
T Consensus 205 ~ 205 (307)
T d1qyca_ 205 P 205 (307)
T ss_dssp G
T ss_pred h
Confidence 4
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=98.76 E-value=6.4e-08 Score=83.57 Aligned_cols=160 Identities=19% Similarity=0.207 Sum_probs=95.7
Q ss_pred EEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCH--HHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 56 ALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP--DKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 56 vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
||||||||-||..++++|+++|+ .|+.+++-. .+... +. ...+ +|..+ .++..+.......-.+
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~----~~----~~~~----~~~~~-~~~~~~~~~~~~~~~~ 68 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVN----LV----DLNI----ADYMD-KEDFLIQIMAGEEFGD 68 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHH----HH----TSCC----SEEEE-HHHHHHHHHTTCCCSS
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhc----cc----ccch----hhhcc-chHHHHHHhhhhcccc
Confidence 89999999999999999999996 687776321 11111 11 1110 11111 1122333332222224
Q ss_pred eEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccccCC---------CC
Q 020854 133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS---------DP 203 (320)
Q Consensus 133 id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~~~~---------~~ 203 (320)
++++++.|+.... ...+ .+...+.|+.+...+...+... +. +++..||......+. ..
T Consensus 69 ~~~i~~~aa~~~~-----~~~~---~~~~~~~~~~~~~~~l~~~~~~----~i-~~v~~ss~~~~~~~~~~~~~~~~~~~ 135 (307)
T d1eq2a_ 69 VEAIFHEGACSST-----TEWD---GKYMMDNNYQYSKELLHYCLER----EI-PFLYASSAATYGGRTSDFIESREYEK 135 (307)
T ss_dssp CCEEEECCSCCCT-----TCCC---HHHHHHHTHHHHHHHHHHHHHH----TC-CEEEEEEGGGGTTCCSCBCSSGGGCC
T ss_pred hhhhhhhcccccc-----cccc---cccccccccccccccccccccc----cc-cccccccccccccccccccccccccc
Confidence 6688888875432 1122 2445677788888877775442 22 355555544443211 12
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHccCCceEEEEeccceecC
Q 020854 204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVPLYVATK 244 (320)
Q Consensus 204 ~~~~Y~asKaal~~~~~~l~~el~~~gi~v~~v~PG~v~T~ 244 (320)
....|+.+|.+.+.+.+.+..+ .++.+..+.|..+-.|
T Consensus 136 ~~~~Y~~~K~~~e~~~~~~~~~---~~~~~~~~r~~~vyGp 173 (307)
T d1eq2a_ 136 PLNVYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGP 173 (307)
T ss_dssp CSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESS
T ss_pred cccccccccchhhhhccccccc---cccccccccceeEeec
Confidence 3567999999999998887655 4788888888877655
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.19 E-value=6.4e-06 Score=65.34 Aligned_cols=79 Identities=18% Similarity=0.252 Sum_probs=61.1
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++|+|+||+|++|...++-....|++|+.+++++++.+... +. +... .+|..+. +..+++.+..+..
T Consensus 28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~----~~--Ga~~---vi~~~~~--~~~~~i~~~t~~~ 96 (174)
T d1yb5a2 28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL----QN--GAHE---VFNHREV--NYIDKIKKYVGEK 96 (174)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HT--TCSE---EEETTST--THHHHHHHHHCTT
T ss_pred CCCEEEEEeccccccccccccccccCccccccccccccccccc----cc--Cccc---ccccccc--cHHHHhhhhhccC
Confidence 5899999999999999999998889999999999887654332 22 2221 2366655 6778888888877
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
.+|+++.++|
T Consensus 97 g~d~v~d~~g 106 (174)
T d1yb5a2 97 GIDIIIEMLA 106 (174)
T ss_dssp CEEEEEESCH
T ss_pred CceEEeeccc
Confidence 7999998876
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=98.15 E-value=5.9e-06 Score=66.04 Aligned_cols=106 Identities=16% Similarity=0.162 Sum_probs=74.6
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++|+|+||+||+|.+.++-....|++|+.+++++++.+... +.+ .. +. +|-.++ +..+++.+..+..
T Consensus 29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~----~~G--a~-~v--i~~~~~--~~~~~~~~~~~~~ 97 (182)
T d1v3va2 29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK----QIG--FD-AA--FNYKTV--NSLEEALKKASPD 97 (182)
T ss_dssp SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTT--CS-EE--EETTSC--SCHHHHHHHHCTT
T ss_pred CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHH----hhh--hh-hh--cccccc--cHHHHHHHHhhcC
Confidence 5999999999999999999999999999999999988754432 222 21 11 344443 4455666666666
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccc
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV 198 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~ 198 (320)
.+|+++++.|. + ..+..++.+ +++|+++.++...+..
T Consensus 98 Gvd~v~D~vG~--~--------------------------~~~~~~~~l--~~~G~~v~~G~~~~~~ 134 (182)
T d1v3va2 98 GYDCYFDNVGG--E--------------------------FLNTVLSQM--KDFGKIAICGAISVYN 134 (182)
T ss_dssp CEEEEEESSCH--H--------------------------HHHHHGGGE--EEEEEEEECCCGGGTT
T ss_pred CCceeEEecCc--h--------------------------hhhhhhhhc--cCCCeEEeecceeecc
Confidence 79999999872 1 114455555 3569999998766543
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.10 E-value=7.4e-06 Score=65.35 Aligned_cols=79 Identities=19% Similarity=0.213 Sum_probs=61.0
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++|+|+||+||+|...++-+...|++|++++++.++.+. +++.+ .. + ..|-.++ +..+++.+..+..
T Consensus 25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~----l~~~G--a~-~--vi~~~~~--~~~~~v~~~t~~~ 93 (183)
T d1pqwa_ 25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREM----LSRLG--VE-Y--VGDSRSV--DFADEILELTDGY 93 (183)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHH----HHTTC--CS-E--EEETTCS--THHHHHHHHTTTC
T ss_pred CCCEEEEECCCCCcccccchhhccccccceeeecccccccc----ccccc--cc-c--cccCCcc--CHHHHHHHHhCCC
Confidence 48999999999999999999988899999999998876543 33332 22 1 2354554 6778888877777
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
.+|+++.++|
T Consensus 94 g~d~v~d~~g 103 (183)
T d1pqwa_ 94 GVDVVLNSLA 103 (183)
T ss_dssp CEEEEEECCC
T ss_pred CEEEEEeccc
Confidence 7999999887
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=98.10 E-value=1.1e-05 Score=64.04 Aligned_cols=79 Identities=22% Similarity=0.269 Sum_probs=62.0
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++|+|+||+||+|...++-....|++|+.+++++++.+... ++ +.. + .+|-.++ +..+++.+..++.
T Consensus 28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-~l-----Ga~-~--vi~~~~~--d~~~~v~~~t~g~ 96 (179)
T d1qora2 28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KA-----GAW-Q--VINYREE--DLVERLKEITGGK 96 (179)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH-----TCS-E--EEETTTS--CHHHHHHHHTTTC
T ss_pred CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH-hc-----CCe-E--EEECCCC--CHHHHHHHHhCCC
Confidence 4899999999999999999999999999999999999876543 23 222 1 2466655 6777887777776
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
.+|+++.++|
T Consensus 97 g~d~v~d~~g 106 (179)
T d1qora2 97 KVRVVYDSVG 106 (179)
T ss_dssp CEEEEEECSC
T ss_pred CeEEEEeCcc
Confidence 7889998887
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.01 E-value=9e-06 Score=64.66 Aligned_cols=105 Identities=20% Similarity=0.172 Sum_probs=68.6
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
..|++|||+||+||.|...++-....|++|+.+++++++.+... +. +... .+ |-.+. ..+..+..+.
T Consensus 30 ~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~----~l--Ga~~-vi--~~~~~----~~~~~~~~~~ 96 (176)
T d1xa0a2 30 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR----VL--GAKE-VL--AREDV----MAERIRPLDK 96 (176)
T ss_dssp GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH----HT--TCSE-EE--ECC-------------CCS
T ss_pred CCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHH----hc--ccce-ee--ecchh----HHHHHHHhhc
Confidence 34899999999999999999988899999999999988865432 22 2221 11 22221 1233344455
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccc
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV 198 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~ 198 (320)
..+|+++.+.|... + ...+..+ +.+|+++.+++..+..
T Consensus 97 ~gvD~vid~vgg~~-------------~---------------~~~l~~l--~~~Griv~~G~~~g~~ 134 (176)
T d1xa0a2 97 QRWAAAVDPVGGRT-------------L---------------ATVLSRM--RYGGAVAVSGLTGGAE 134 (176)
T ss_dssp CCEEEEEECSTTTT-------------H---------------HHHHHTE--EEEEEEEECSCCSSSC
T ss_pred cCcCEEEEcCCchh-------------H---------------HHHHHHh--CCCceEEEeecccCcc
Confidence 57999999998321 1 2333444 3579999999987765
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=97.97 E-value=1.9e-05 Score=63.05 Aligned_cols=85 Identities=19% Similarity=0.315 Sum_probs=60.1
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHH---HHHHHhhcCCceEEEEEEeCCCCcHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDV---SDSIQAKYAKTQIKSVVVDFSGDLDEGVER 123 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~---~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~ 123 (320)
..+++||.|+|.|+ ||.|++++..|.+.|. +++++.|+.++.++. .+++.... .......|..+. +.
T Consensus 13 ~~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~-----~~ 83 (182)
T d1vi2a1 13 GFDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENT---DCVVTVTDLADQ-----QA 83 (182)
T ss_dssp TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS---SCEEEEEETTCH-----HH
T ss_pred CCCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhc---CcceEeeecccc-----cc
Confidence 34577999999999 7999999999999998 788999987665544 44444432 233446666654 34
Q ss_pred HHHHHcCCCeEEEEEccCCC
Q 020854 124 IKEAIEGLDVGVLINNVGIS 143 (320)
Q Consensus 124 ~~~~~~~~~id~lI~nAG~~ 143 (320)
+.+.+...| ++||+....
T Consensus 84 ~~~~~~~~d--iiIN~Tp~G 101 (182)
T d1vi2a1 84 FAEALASAD--ILTNGTKVG 101 (182)
T ss_dssp HHHHHHTCS--EEEECSSTT
T ss_pred hhhhhcccc--eeccccCCc
Confidence 445555444 999987654
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=97.84 E-value=7.7e-05 Score=58.43 Aligned_cols=82 Identities=27% Similarity=0.343 Sum_probs=56.4
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCC-CcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG-DLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 130 (320)
.|.+|+|+| +|++|...++-+...|++|+++++++++++...+ + +... .+..|..+ +..+..+.+.+..+.
T Consensus 26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~-~-----ga~~-~~~~~~~~~~~~~~~~~~~~~~g~ 97 (170)
T d1e3ja2 26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-C-----GADV-TLVVDPAKEEESSIIERIRSAIGD 97 (170)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-T-----TCSE-EEECCTTTSCHHHHHHHHHHHSSS
T ss_pred CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH-c-----CCcE-EEeccccccccchhhhhhhccccc
Confidence 478899997 6899999999888999999999999998764432 2 2222 22333333 223444555555544
Q ss_pred CCeEEEEEccCC
Q 020854 131 LDVGVLINNVGI 142 (320)
Q Consensus 131 ~~id~lI~nAG~ 142 (320)
.+|++|.++|.
T Consensus 98 -g~D~vid~~g~ 108 (170)
T d1e3ja2 98 -LPNVTIDCSGN 108 (170)
T ss_dssp -CCSEEEECSCC
T ss_pred -CCceeeecCCC
Confidence 57799999883
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=97.80 E-value=7.5e-05 Score=58.09 Aligned_cols=74 Identities=16% Similarity=0.326 Sum_probs=55.9
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
+++++.++|.|+ |++|..+++.|...|+ ++.++.|+.++.++..+++ +... . + ++++.+.+
T Consensus 21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~-----~~~~--~--~--------~~~~~~~l 82 (159)
T d1gpja2 21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL-----GGEA--V--R--------FDELVDHL 82 (159)
T ss_dssp CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH-----TCEE--C--C--------GGGHHHHH
T ss_pred CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhh-----hccc--c--c--------chhHHHHh
Confidence 356999999998 9999999999999998 6999999999988877765 2221 1 1 13444555
Q ss_pred cCCCeEEEEEccCCC
Q 020854 129 EGLDVGVLINNVGIS 143 (320)
Q Consensus 129 ~~~~id~lI~nAG~~ 143 (320)
...| ++|++.+..
T Consensus 83 ~~~D--ivi~atss~ 95 (159)
T d1gpja2 83 ARSD--VVVSATAAP 95 (159)
T ss_dssp HTCS--EEEECCSSS
T ss_pred ccCC--EEEEecCCC
Confidence 5555 999988753
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=97.77 E-value=2.8e-05 Score=62.41 Aligned_cols=87 Identities=20% Similarity=0.199 Sum_probs=56.8
Q ss_pred CCE-EEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 53 GSW-ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 53 gk~-vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
|+. ++++||+||+|.+.++-.-..|++||.+.|+.++.++..+.+++.+.+. +....-+...+..+.+.++.+..+.
T Consensus 29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~-vi~~~~~~~~~~~~~v~~~~~~~g~- 106 (189)
T d1gu7a2 29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQ-VITEDQNNSREFGPTIKEWIKQSGG- 106 (189)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSE-EEEHHHHHCGGGHHHHHHHHHHHTC-
T ss_pred CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccE-EEeccccchhHHHHHHHHHHhhccC-
Confidence 554 4557999999999998888899999999998888887777777664332 1111111111223334444444343
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
.+|+++++.|
T Consensus 107 ~vdvv~D~vg 116 (189)
T d1gu7a2 107 EAKLALNCVG 116 (189)
T ss_dssp CEEEEEESSC
T ss_pred CceEEEECCC
Confidence 5889998876
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.72 E-value=3e-05 Score=52.47 Aligned_cols=42 Identities=24% Similarity=0.316 Sum_probs=37.5
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV 93 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~ 93 (320)
+|..++|+||+||.|...++-+...|++|+.+.+++++.+..
T Consensus 31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~ 72 (77)
T d1o8ca2 31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL 72 (77)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence 578999999999999999998888999999999998886544
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=97.71 E-value=4.5e-05 Score=60.09 Aligned_cols=52 Identities=12% Similarity=0.258 Sum_probs=45.7
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhh
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAK 100 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~ 100 (320)
.+.++||.|+|.|+ ||-+++++..|.+.|.+|.++.|+.++.+++.+.+...
T Consensus 13 ~~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~ 64 (170)
T d1nyta1 13 SFIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT 64 (170)
T ss_dssp TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG
T ss_pred CCCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhc
Confidence 35567999999997 89999999999999999999999999999888777553
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=97.71 E-value=0.00012 Score=57.58 Aligned_cols=79 Identities=23% Similarity=0.324 Sum_probs=57.6
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA 127 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 127 (320)
...++||.|+|.|+ ||-+++++..|.+.+.+|+++.|+.++.++.++.+...+ .+.....|..+
T Consensus 13 ~~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~---~~~~~~~~~~~------------ 76 (171)
T d1p77a1 13 NWLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG---NIQAVSMDSIP------------ 76 (171)
T ss_dssp TCCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS---CEEEEEGGGCC------------
T ss_pred CCCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhcc---ccchhhhcccc------------
Confidence 34567999999876 888999999999888899999999999999988885432 34444333221
Q ss_pred HcCCCeEEEEEccCCCC
Q 020854 128 IEGLDVGVLINNVGISY 144 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~ 144 (320)
.. +.|++||+.....
T Consensus 77 ~~--~~diiIN~tp~g~ 91 (171)
T d1p77a1 77 LQ--TYDLVINATSAGL 91 (171)
T ss_dssp CS--CCSEEEECCCC--
T ss_pred cc--ccceeeecccccc
Confidence 12 4569999987654
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=97.66 E-value=0.00011 Score=58.29 Aligned_cols=81 Identities=16% Similarity=0.306 Sum_probs=58.6
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC-cHHHHHHHHHHHc
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD-LDEGVERIKEAIE 129 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~ 129 (320)
.|.+|+|+|+ |++|...++-+...|+ +|+++++++++++.. +++ +.. ..+|..+. ..+..+.+.+..+
T Consensus 28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~l-----Ga~---~vi~~~~~~~~~~~~~i~~~~~ 97 (182)
T d1vj0a2 28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EEI-----GAD---LTLNRRETSVEERRKAIMDITH 97 (182)
T ss_dssp BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HHT-----TCS---EEEETTTSCHHHHHHHHHHHTT
T ss_pred CCCEEEEECC-Cccchhheeccccccccccccccccccccccc-ccc-----cce---EEEeccccchHHHHHHHHHhhC
Confidence 5899999997 8999999999989998 799999999987643 333 221 12355543 2344555666655
Q ss_pred CCCeEEEEEccCC
Q 020854 130 GLDVGVLINNVGI 142 (320)
Q Consensus 130 ~~~id~lI~nAG~ 142 (320)
...+|++|.++|.
T Consensus 98 ~~g~Dvvid~vG~ 110 (182)
T d1vj0a2 98 GRGADFILEATGD 110 (182)
T ss_dssp TSCEEEEEECSSC
T ss_pred CCCceEEeecCCc
Confidence 5568999999874
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=97.65 E-value=0.00023 Score=55.63 Aligned_cols=80 Identities=15% Similarity=0.145 Sum_probs=59.3
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|.+|+|+|++|++|...++.+...|+ +|+++++++++.+... ++ +.. + ..|..++ +..+++.+....
T Consensus 27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~-~~-----Ga~-~--~i~~~~~--~~~~~~~~~~~~ 95 (170)
T d1jvba2 27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RA-----GAD-Y--VINASMQ--DPLAEIRRITES 95 (170)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HH-----TCS-E--EEETTTS--CHHHHHHHHTTT
T ss_pred CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHH-Hc-----CCc-e--eeccCCc--CHHHHHHHHhhc
Confidence 478999999999999999999998895 8999999988766443 22 222 1 2344444 566777776666
Q ss_pred CCeEEEEEccCC
Q 020854 131 LDVGVLINNVGI 142 (320)
Q Consensus 131 ~~id~lI~nAG~ 142 (320)
..+|++|.++|.
T Consensus 96 ~~~d~vid~~g~ 107 (170)
T d1jvba2 96 KGVDAVIDLNNS 107 (170)
T ss_dssp SCEEEEEESCCC
T ss_pred ccchhhhccccc
Confidence 678899999874
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.58 E-value=4.5e-05 Score=59.92 Aligned_cols=42 Identities=17% Similarity=0.225 Sum_probs=38.6
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSD 95 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~ 95 (320)
+|.|+|.|| |.+|+.+|+.|+++|++|++++|+.+++++..+
T Consensus 2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~ 43 (182)
T d1e5qa1 2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSA 43 (182)
T ss_dssp CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHT
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHh
Confidence 689999987 999999999999999999999999999887654
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.49 E-value=0.0002 Score=57.01 Aligned_cols=105 Identities=18% Similarity=0.191 Sum_probs=64.2
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEE-EEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLV-LVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vi-l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
+++|||+||+||+|...++-.-..|++++ .++++.++..+...++ +.. ...|..++ +..+.+.+..+ .
T Consensus 31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~-----gad---~vi~~~~~--~~~~~~~~~~~-~ 99 (187)
T d1vj1a2 31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL-----GFD---AAVNYKTG--NVAEQLREACP-G 99 (187)
T ss_dssp CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS-----CCS---EEEETTSS--CHHHHHHHHCT-T
T ss_pred CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc-----cce---EEeeccch--hHHHHHHHHhc-c
Confidence 58999999999999999998888998655 4566766655555444 222 23355544 44455555443 3
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccc
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV 198 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~ 198 (320)
.+|+++.+.|. + .+ +..+..+ ++.|+++.+++.++..
T Consensus 100 GvDvv~D~vGg--~-----------~~---------------~~~~~~l--~~~G~iv~~G~~s~~~ 136 (187)
T d1vj1a2 100 GVDVYFDNVGG--D-----------IS---------------NTVISQM--NENSHIILCGQISQYN 136 (187)
T ss_dssp CEEEEEESSCH--H-----------HH---------------HHHHTTE--EEEEEEEEC-------
T ss_pred CceEEEecCCc--h-----------hH---------------HHHhhhc--cccccEEEeccccccc
Confidence 58899988872 0 11 2333434 4579999998876643
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=97.46 E-value=0.00031 Score=55.29 Aligned_cols=79 Identities=16% Similarity=0.200 Sum_probs=58.3
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|.+|+|.|+ ||+|...++.+...|+ +|+.+++++++++.. +++ +.. + .+|..++ +..+++.+..+.
T Consensus 27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a-~~l-----Ga~-~--~i~~~~~--~~~~~v~~~t~g 94 (174)
T d1jqba2 27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAA-KFY-----GAT-D--ILNYKNG--HIEDQVMKLTNG 94 (174)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHH-HHH-----TCS-E--EECGGGS--CHHHHHHHHTTT
T ss_pred CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHH-Hhh-----Ccc-c--cccccch--hHHHHHHHHhhc
Confidence 4788999986 8999999999888998 799999999886544 333 221 1 2344443 456777777776
Q ss_pred CCeEEEEEccCC
Q 020854 131 LDVGVLINNVGI 142 (320)
Q Consensus 131 ~~id~lI~nAG~ 142 (320)
..+|++|.++|.
T Consensus 95 ~G~D~vid~~g~ 106 (174)
T d1jqba2 95 KGVDRVIMAGGG 106 (174)
T ss_dssp SCEEEEEECSSC
T ss_pred cCcceEEEccCC
Confidence 668999999985
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.45 E-value=0.00035 Score=54.66 Aligned_cols=80 Identities=19% Similarity=0.265 Sum_probs=54.8
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCC-CCcHHHHHHHHHHHc
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS-GDLDEGVERIKEAIE 129 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~ 129 (320)
.|.+|+|.|+ |++|...++.+...|+ +|+++++++++++.. +++ +... .+ +.. ++..+..+.+....+
T Consensus 26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a-~~~-----Ga~~-~~--~~~~~~~~~~~~~~~~~~g 95 (171)
T d1pl8a2 26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-KEI-----GADL-VL--QISKESPQEIARKVEGQLG 95 (171)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHT-----TCSE-EE--ECSSCCHHHHHHHHHHHHT
T ss_pred CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHH-HHh-----CCcc-cc--cccccccccccccccccCC
Confidence 4788999986 9999999999999999 799999999987743 333 2221 11 222 222344455555555
Q ss_pred CCCeEEEEEccCC
Q 020854 130 GLDVGVLINNVGI 142 (320)
Q Consensus 130 ~~~id~lI~nAG~ 142 (320)
. .+|++|.++|.
T Consensus 96 ~-g~Dvvid~~G~ 107 (171)
T d1pl8a2 96 C-KPEVTIECTGA 107 (171)
T ss_dssp S-CCSEEEECSCC
T ss_pred C-CceEEEeccCC
Confidence 4 56799999884
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.42 E-value=0.00019 Score=56.67 Aligned_cols=51 Identities=25% Similarity=0.461 Sum_probs=44.1
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcC
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYA 102 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~ 102 (320)
+++||.|+|.|+ ||.+++++..|.+.| +|.+..|+.++.++..+.+.....
T Consensus 15 ~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~ 65 (177)
T d1nvta1 15 RVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLN 65 (177)
T ss_dssp CCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHT
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhc
Confidence 467999999976 789999999998777 999999999999999988876543
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=97.35 E-value=0.0018 Score=49.23 Aligned_cols=113 Identities=16% Similarity=0.278 Sum_probs=64.5
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHHHhhcC-CceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPDKLKDVSDSIQAKYA-KTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G--~~Vil~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
.+.+.|.|+ |.+|..+|..|+.+| .+|+++|+++++.+..+.++..... .........|. +.+.
T Consensus 5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~------------~~~~ 71 (146)
T d1ez4a1 5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY------------SDCK 71 (146)
T ss_dssp BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG------------GGGT
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH------------HHhc
Confidence 456777895 999999999999988 4899999999888776666654211 11222222221 1223
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEc
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIG 192 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vs 192 (320)
+-|++|..||.... + ..+ -.+.+..|.. +++...+.+.+.. ++.++++|
T Consensus 72 --~adivvitag~~~~---~--g~~---r~~l~~~N~~----i~~~~~~~i~~~~p~aivivvt 121 (146)
T d1ez4a1 72 --DADLVVITAGAPQK---P--GES---RLDLVNKNLN----ILSSIVKPVVDSGFDGIFLVAA 121 (146)
T ss_dssp --TCSEEEECCCC------------------CHHHHHH----HHHHHHHHHHHTTCCSEEEECS
T ss_pred --cccEEEEecccccC---C--CCC---HHHHHHHHHH----HHHHHHHHHhhcCCCcEEEEeC
Confidence 34499999986432 1 112 2333455554 4444444455444 45555554
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=97.27 E-value=0.001 Score=52.11 Aligned_cols=78 Identities=18% Similarity=0.249 Sum_probs=54.6
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLN-LVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~-Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|.+|+|.|+ |++|...++.+...|++ |+++++++++++.. +++ +.. +. +|..++ +..+++.+..+.
T Consensus 28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a-~~~-----Ga~-~~--i~~~~~--~~~~~i~~~t~g 95 (174)
T d1f8fa2 28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQL-----GAT-HV--INSKTQ--DPVAAIKEITDG 95 (174)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHH-----TCS-EE--EETTTS--CHHHHHHHHTTS
T ss_pred CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHH-HHc-----CCe-EE--EeCCCc--CHHHHHHHHcCC
Confidence 4889999987 89999999988888985 45667888776653 333 221 22 344444 556666665554
Q ss_pred CCeEEEEEccCC
Q 020854 131 LDVGVLINNVGI 142 (320)
Q Consensus 131 ~~id~lI~nAG~ 142 (320)
.+|++|.++|.
T Consensus 96 -g~D~vid~~G~ 106 (174)
T d1f8fa2 96 -GVNFALESTGS 106 (174)
T ss_dssp -CEEEEEECSCC
T ss_pred -CCcEEEEcCCc
Confidence 68899999884
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.25 E-value=0.00052 Score=51.20 Aligned_cols=71 Identities=21% Similarity=0.273 Sum_probs=51.7
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeE
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG 134 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 134 (320)
.|+|.|+ |-+|+.++++|.+.|++|+++++|++..++..+++ ....+..|.+|. ++.+..+-.+.|
T Consensus 2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~-------~~~vi~Gd~~~~------~~l~~~~i~~a~ 67 (132)
T d1lssa_ 2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-------DALVINGDCTKI------KTLEDAGIEDAD 67 (132)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-------SSEEEESCTTSH------HHHHHTTTTTCS
T ss_pred EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh-------hhhhccCcccch------hhhhhcChhhhh
Confidence 5889998 99999999999999999999999999877654422 245677888875 233333322344
Q ss_pred EEEEc
Q 020854 135 VLINN 139 (320)
Q Consensus 135 ~lI~n 139 (320)
.++..
T Consensus 68 ~vv~~ 72 (132)
T d1lssa_ 68 MYIAV 72 (132)
T ss_dssp EEEEC
T ss_pred hhccc
Confidence 66653
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.17 E-value=0.0064 Score=46.07 Aligned_cols=115 Identities=15% Similarity=0.245 Sum_probs=69.0
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhhcC--CceEEEEEEeCCCCcHHHHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYA--KTQIKSVVVDFSGDLDEGVERIKEA 127 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~ 127 (320)
.++.+.|+|+ |.+|..+|..++.+|. +++++|+++++++..+.++..... ...+.....|.. .
T Consensus 5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~------------~ 71 (148)
T d1ldna1 5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYD------------D 71 (148)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGG------------G
T ss_pred CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCHH------------H
Confidence 3677888897 9999999999999885 799999999988877777754211 122222222211 1
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhc-CCCcEEEEEcC
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK-RKKGAIVNIGS 193 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~-~~~g~Iv~vsS 193 (320)
+.. -|++|..+|.... +- .+. .+.+..|.- +++...+.+.+ .+++.++++|-
T Consensus 72 l~d--aDvvvitag~~~~---~~--~~R---~dl~~~N~~----i~~~i~~~i~~~~p~a~~ivvtN 124 (148)
T d1ldna1 72 CRD--ADLVVICAGANQK---PG--ETR---LDLVDKNIA----IFRSIVESVMASGFQGLFLVATN 124 (148)
T ss_dssp TTT--CSEEEECCSCCCC---TT--TCS---GGGHHHHHH----HHHHHHHHHHHHTCCSEEEECSS
T ss_pred hcc--ceeEEEecccccc---cC--cch---hHHHHHHHH----HHHHHHHHHHhhCCCceEEEecC
Confidence 233 4499999997542 11 111 122344433 33444444433 35677777654
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.16 E-value=0.0091 Score=45.01 Aligned_cols=112 Identities=21% Similarity=0.301 Sum_probs=65.0
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCH--HHHHHHHHHHHhhc----CCceEEEEEEeCCCCcHHHHHHHHH
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNP--DKLKDVSDSIQAKY----AKTQIKSVVVDFSGDLDEGVERIKE 126 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~--~~~~~~~~~l~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~ 126 (320)
.+.|+||+|.+|.++|..++.+|. +++++++++ ++++..+.++.... ...++.... +++ .+
T Consensus 2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~---~~d--------~~ 70 (145)
T d1hyea1 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES---DEN--------LR 70 (145)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE---TTC--------GG
T ss_pred EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCC---cch--------HH
Confidence 488999999999999999999984 899999876 34555555554321 112222221 111 01
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEE
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNI 191 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~v 191 (320)
.+. +-|++|..||.... + ..+.. +.++.|..= ++...+.+.+..+..|+.+
T Consensus 71 ~l~--~aDvVVitAG~~~~---~--g~sR~---dl~~~Na~i----v~~i~~~i~~~~~~~iivV 121 (145)
T d1hyea1 71 IID--ESDVVIITSGVPRK---E--GMSRM---DLAKTNAKI----VGKYAKKIAEICDTKIFVI 121 (145)
T ss_dssp GGT--TCSEEEECCSCCCC---T--TCCHH---HHHHHHHHH----HHHHHHHHHHHCCCEEEEC
T ss_pred Hhc--cceEEEEecccccC---C--CCChh---hhhhhhHHH----HHHHHHHHhccCCCeEEEE
Confidence 123 34499999997432 1 23432 344555544 4444444544444556555
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.14 E-value=0.00029 Score=55.62 Aligned_cols=102 Identities=22% Similarity=0.261 Sum_probs=66.5
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.++++||+||+||+|...++-.-..|++|+.+++++++.+.. +++ +.. +.+.-+..+. .+.+...
T Consensus 31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~-~~l-----Gad-~vi~~~~~~~--------~~~l~~~ 95 (177)
T d1o89a2 31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL-KSL-----GAS-RVLPRDEFAE--------SRPLEKQ 95 (177)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH-HHH-----TEE-EEEEGGGSSS--------CCSSCCC
T ss_pred CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH-Hhh-----ccc-cccccccHHH--------HHHHHhh
Confidence 467899999999999999999889999999999999886543 333 222 2222221111 1122333
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccc
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV 198 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~ 198 (320)
..|.+|.++|.. .....++.+ +.+|+||.++...+..
T Consensus 96 ~~~~vvD~Vgg~----------------------------~~~~~l~~l--~~~Griv~~G~~~~~~ 132 (177)
T d1o89a2 96 VWAGAIDTVGDK----------------------------VLAKVLAQM--NYGGCVAACGLAGGFT 132 (177)
T ss_dssp CEEEEEESSCHH----------------------------HHHHHHHTE--EEEEEEEECCCTTCSC
T ss_pred cCCeeEEEcchH----------------------------HHHHHHHHh--ccccceEeecccCCcc
Confidence 467888777520 123444445 3579999999887754
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=97.14 E-value=0.0002 Score=56.09 Aligned_cols=104 Identities=17% Similarity=0.152 Sum_probs=66.8
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|++|||+||+||+|...++-.-..|++|+.+++++++.+.+. +. +.... + |-. +...+..+.....
T Consensus 23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~----~l--Gad~v-i--~~~----~~~~~~~~~~~~~ 89 (167)
T d1tt7a2 23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK----QL--GASEV-I--SRE----DVYDGTLKALSKQ 89 (167)
T ss_dssp GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH----HH--TCSEE-E--EHH----HHCSSCCCSSCCC
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHH----hh--cccce-E--ecc----chhchhhhcccCC
Confidence 4778999999999999999888889999999999988765542 22 22221 1 211 1111111222333
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcCccccc
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV 198 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS~~~~~ 198 (320)
.+|+++.+.|.. .....+..+ ++.|++|.++...+..
T Consensus 90 gvd~vid~vgg~----------------------------~~~~~~~~l--~~~G~iv~~G~~~g~~ 126 (167)
T d1tt7a2 90 QWQGAVDPVGGK----------------------------QLASLLSKI--QYGGSVAVSGLTGGGE 126 (167)
T ss_dssp CEEEEEESCCTH----------------------------HHHHHHTTE--EEEEEEEECCCSSCSC
T ss_pred CceEEEecCcHH----------------------------HHHHHHHHh--ccCceEEEeeccCCCc
Confidence 588999998731 112333434 3579999999887754
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=97.13 E-value=0.00058 Score=55.88 Aligned_cols=79 Identities=16% Similarity=0.153 Sum_probs=56.0
Q ss_pred ccCCCEEEEECC----------------CCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeC
Q 020854 50 RKYGSWALVTGP----------------TDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDF 113 (320)
Q Consensus 50 ~~~gk~vlITGa----------------s~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~ 113 (320)
+++|+.||||+| ||-.|.++|+++..+|++|+++.-.... . +...+..+.+.
T Consensus 3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~----------~-~p~~~~~~~~~- 70 (223)
T d1u7za_ 3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL----------P-TPPFVKRVDVM- 70 (223)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC----------C-CCTTEEEEECC-
T ss_pred ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc----------C-cccccccceeh-
Confidence 366999999985 6889999999999999999998764321 0 01223333322
Q ss_pred CCCcHHHHHHHHHHHcCCCeEEEEEccCCCC
Q 020854 114 SGDLDEGVERIKEAIEGLDVGVLINNVGISY 144 (320)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~id~lI~nAG~~~ 144 (320)
...+..+.+.+.++..| ++|.+|.+..
T Consensus 71 --t~~~m~~~~~~~~~~~D--~~i~aAAvsD 97 (223)
T d1u7za_ 71 --TALEMEAAVNASVQQQN--IFIGCAAVAD 97 (223)
T ss_dssp --SHHHHHHHHHHHGGGCS--EEEECCBCCS
T ss_pred --hhHHHHHHHHhhhccce--eEeeeechhh
Confidence 33466677777777656 9999998865
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=97.13 E-value=0.0018 Score=50.41 Aligned_cols=78 Identities=22% Similarity=0.298 Sum_probs=54.0
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|.+|+|.|+ |++|...++.+...|+ +|+.+++++++++...+ . +.. +. +|..+ +..+...+....
T Consensus 32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~----~--ga~-~~--i~~~~---~~~~~~~~~~~~ 98 (172)
T d1h2ba2 32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER----L--GAD-HV--VDARR---DPVKQVMELTRG 98 (172)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH----T--TCS-EE--EETTS---CHHHHHHHHTTT
T ss_pred CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhh----c--ccc-ee--ecCcc---cHHHHHHHhhCC
Confidence 4789999986 9999999998888886 67778899887664432 2 221 22 34333 344555565555
Q ss_pred CCeEEEEEccCC
Q 020854 131 LDVGVLINNVGI 142 (320)
Q Consensus 131 ~~id~lI~nAG~ 142 (320)
..+|++|.++|.
T Consensus 99 ~g~d~vid~~g~ 110 (172)
T d1h2ba2 99 RGVNVAMDFVGS 110 (172)
T ss_dssp CCEEEEEESSCC
T ss_pred CCceEEEEecCc
Confidence 578999999984
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=97.07 E-value=0.00063 Score=53.33 Aligned_cols=80 Identities=19% Similarity=0.269 Sum_probs=53.9
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|.+|+|.|+ +|+|...+..+...|+ +|+.+++++++.+...+ + +.. + ..|..+. ++.++...+....
T Consensus 28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~-~-----Ga~-~--~i~~~~~-~~~~~~~~~~~~~ 96 (176)
T d2jhfa2 28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE-V-----GAT-E--CVNPQDY-KKPIQEVLTEMSN 96 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-T-----TCS-E--EECGGGC-SSCHHHHHHHHTT
T ss_pred CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH-h-----CCe-e--EEecCCc-hhHHHHHHHHHhc
Confidence 5899999999 7899999999999985 89999999998764422 2 221 1 1222221 1334444444444
Q ss_pred CCeEEEEEccCC
Q 020854 131 LDVGVLINNVGI 142 (320)
Q Consensus 131 ~~id~lI~nAG~ 142 (320)
..+|++|.+.|.
T Consensus 97 ~G~D~vid~~G~ 108 (176)
T d2jhfa2 97 GGVDFSFEVIGR 108 (176)
T ss_dssp SCBSEEEECSCC
T ss_pred CCCCEEEecCCc
Confidence 467799998884
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=97.04 E-value=0.0027 Score=48.61 Aligned_cols=122 Identities=16% Similarity=0.132 Sum_probs=68.7
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhc--CCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKY--AKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
+.+.+.|.|+ |.+|..+|..++..|. ++++.|.++++++..+.++.... .+........ +. ..+.+
T Consensus 6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~---~~-------~~~~~ 74 (154)
T d1pzga1 6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE---YS-------YEAAL 74 (154)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE---CS-------HHHHH
T ss_pred CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEecc---Cc-------hhhhh
Confidence 3566777897 9999999999988884 89999999988777766664421 1111111111 11 11223
Q ss_pred cCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhc-CCCcEEEEEcC
Q 020854 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK-RKKGAIVNIGS 193 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~-~~~g~Iv~vsS 193 (320)
...| ++|..+|.......+-.+.+.. +.+..|..- ++...+.+.+ .+++.++++|.
T Consensus 75 ~~ad--iVvitag~~~~~g~~~~~~tR~---~l~~~n~~i----v~~i~~~i~~~~p~aiviivsN 131 (154)
T d1pzga1 75 TGAD--CVIVTAGLTKVPGKPDSEWSRN---DLLPFNSKI----IREIGQNIKKYCPKTFIIVVTN 131 (154)
T ss_dssp TTCS--EEEECCSCSSCTTCCGGGCCGG---GGHHHHHHH----HHHHHHHHHHHCTTCEEEECCS
T ss_pred cCCC--eEEEecccccCCCCCCcccchh---hhhhhhHHH----HHHHHHHHHhcCCCcEEEEeCC
Confidence 3335 9999998765311111122322 223444443 4444444443 34566666654
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=97.03 E-value=0.0013 Score=51.52 Aligned_cols=81 Identities=20% Similarity=0.315 Sum_probs=54.9
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
..|.+|+|+|+ ||+|...++.+...|+ +|+.+++++++++.. .++ +... .+ |..+.. ...+.+.+...
T Consensus 28 ~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~A-k~~-----GA~~-~i--n~~~~~-~~~~~~~~~~~ 96 (176)
T d1d1ta2 28 KPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKA-MAV-----GATE-CI--SPKDST-KPISEVLSEMT 96 (176)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHH-----TCSE-EE--CGGGCS-SCHHHHHHHHH
T ss_pred CCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHH-Hhc-----CCcE-EE--Cccccc-hHHHHHHHHhc
Confidence 35899999986 9999999999999995 899999999998743 333 2222 22 222221 22334444444
Q ss_pred CCCeEEEEEccCC
Q 020854 130 GLDVGVLINNVGI 142 (320)
Q Consensus 130 ~~~id~lI~nAG~ 142 (320)
...+|++|.+.|.
T Consensus 97 g~G~d~vi~~~g~ 109 (176)
T d1d1ta2 97 GNNVGYTFEVIGH 109 (176)
T ss_dssp TSCCCEEEECSCC
T ss_pred cccceEEEEeCCc
Confidence 4457799998884
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=97.03 E-value=0.00038 Score=54.51 Aligned_cols=42 Identities=21% Similarity=0.291 Sum_probs=37.3
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV 93 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~ 93 (320)
.|++|+|+||+|++|...++-....|++|+.+++++++.+..
T Consensus 27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~ 68 (171)
T d1iz0a2 27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP 68 (171)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH
T ss_pred CCCEEEEEeccccchhhhhhhhcccccccccccccccccccc
Confidence 589999999999999999998888999999999988776543
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.94 E-value=0.0029 Score=48.75 Aligned_cols=76 Identities=20% Similarity=0.326 Sum_probs=50.9
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|.+|+|.|+ |++|...++-+...|++|+.+++++++++... ++ +.. + ..|..++ +..+.+.+....
T Consensus 27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~-~~-----Ga~-~--~i~~~~~--~~~~~~~~~~~g- 93 (166)
T d1llua2 27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELAR-KL-----GAS-L--TVNARQE--DPVEAIQRDIGG- 93 (166)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HT-----TCS-E--EEETTTS--CHHHHHHHHHSS-
T ss_pred CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhh-cc-----Ccc-c--cccccch--hHHHHHHHhhcC-
Confidence 4889999886 99999999888889999999999998876432 22 222 1 2355544 455556555443
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
.+..|-++|
T Consensus 94 -~~~~i~~~~ 102 (166)
T d1llua2 94 -AHGVLVTAV 102 (166)
T ss_dssp -EEEEEECCS
T ss_pred -Ccccccccc
Confidence 335555544
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=96.92 E-value=0.0064 Score=45.95 Aligned_cols=117 Identities=21% Similarity=0.238 Sum_probs=67.6
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhhcC--CceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYA--KTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
|.+.|+|+ |.+|.++|..|+.+|. ++++.++++++++....++....+ .........|.. .+.
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~~------------~l~ 68 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWA------------ALA 68 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGG------------GGT
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCHH------------Hhc
Confidence 56778895 9999999999999884 799999999988777766654321 222222222211 123
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcC
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGS 193 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS 193 (320)
+-|++|..||...... +...+.-.+.++.|. .+++...+.+.+.. ++.++++|-
T Consensus 69 --~adiVVitaG~~~~~~----~~~g~~R~~l~~~N~----~i~~~i~~~i~~~~p~aivivvtN 123 (146)
T d1hyha1 69 --DADVVISTLGNIKLQQ----DNPTGDRFAELKFTS----SMVQSVGTNLKESGFHGVLVVISN 123 (146)
T ss_dssp --TCSEEEECCSCGGGTC-----------CTTHHHHH----HHHHHHHHHHHHTTCCSEEEECSS
T ss_pred --cccEEEEecccccccc----ccCCccHHHHHHHHH----HHHHHHHHHHhhcCCCeEEEEecC
Confidence 3449999999754210 000111122334443 45566666665554 556666543
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=96.85 E-value=0.0024 Score=50.92 Aligned_cols=80 Identities=20% Similarity=0.195 Sum_probs=56.4
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|.+|+|.|+ |++|...++.....|+ +|+++++++++++... ++ +... ..|-.+. +..+++.+..+.
T Consensus 25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~-~~-----Ga~~---~~~~~~~--~~~~~i~~~t~g 92 (195)
T d1kola2 25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-AQ-----GFEI---ADLSLDT--PLHEQIAALLGE 92 (195)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT-----TCEE---EETTSSS--CHHHHHHHHHSS
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhh-hc-----cccE---EEeCCCc--CHHHHHHHHhCC
Confidence 4899999986 8999888888777887 7889999998876432 22 2221 1222233 566777776676
Q ss_pred CCeEEEEEccCCC
Q 020854 131 LDVGVLINNVGIS 143 (320)
Q Consensus 131 ~~id~lI~nAG~~ 143 (320)
..+|++|.+.|.-
T Consensus 93 ~g~D~vid~vG~~ 105 (195)
T d1kola2 93 PEVDCAVDAVGFE 105 (195)
T ss_dssp SCEEEEEECCCTT
T ss_pred CCcEEEEECcccc
Confidence 6788999999853
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=96.85 E-value=0.0011 Score=49.32 Aligned_cols=73 Identities=18% Similarity=0.287 Sum_probs=50.0
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCe
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV 133 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 133 (320)
|.++|.|+ |-+|+.+|+.|.+.|.+|++++.|++..++.. + .....+..|.++. +..++. .+.. .
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~----~----~~~~~~~gd~~~~--~~l~~a--~i~~--a 65 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----S----YATHAVIANATEE--NELLSL--GIRN--F 65 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT----T----TCSEEEECCTTCT--THHHHH--TGGG--C
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH----H----hCCcceeeecccc--hhhhcc--CCcc--c
Confidence 45677766 89999999999999999999999998877653 2 1234556788876 333222 2333 3
Q ss_pred EEEEEccC
Q 020854 134 GVLINNVG 141 (320)
Q Consensus 134 d~lI~nAG 141 (320)
|.+|...+
T Consensus 66 ~~vi~~~~ 73 (134)
T d2hmva1 66 EYVIVAIG 73 (134)
T ss_dssp SEEEECCC
T ss_pred cEEEEEcC
Confidence 36665543
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=96.82 E-value=0.002 Score=50.33 Aligned_cols=81 Identities=19% Similarity=0.201 Sum_probs=54.1
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
..|.+|+|.|+ ||+|...++.+...|+ +|+.+++++++++... ++ +.. +. .|..+. +..+++..+...
T Consensus 26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~-~l-----Ga~-~~--i~~~~~-d~~~~~~~~~~~ 94 (174)
T d1p0fa2 26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-EL-----GAT-EC--LNPKDY-DKPIYEVICEKT 94 (174)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HT-----TCS-EE--ECGGGC-SSCHHHHHHHHT
T ss_pred CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHH-Hc-----CCc-EE--EcCCCc-hhHHHHHHHHhc
Confidence 35899999986 9999999999999997 7889999999876543 22 222 12 233322 122344444444
Q ss_pred CCCeEEEEEccCC
Q 020854 130 GLDVGVLINNVGI 142 (320)
Q Consensus 130 ~~~id~lI~nAG~ 142 (320)
...+|++|-++|.
T Consensus 95 ~~G~d~vid~~g~ 107 (174)
T d1p0fa2 95 NGGVDYAVECAGR 107 (174)
T ss_dssp TSCBSEEEECSCC
T ss_pred CCCCcEEEEcCCC
Confidence 4457799988874
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=96.82 E-value=0.019 Score=44.64 Aligned_cols=116 Identities=16% Similarity=0.177 Sum_probs=64.7
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcC---C----eEEEEeCCH--HHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTG---L----NLVLVGRNP--DKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVER 123 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G---~----~Vil~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~ 123 (320)
...|.||||+|+||..++..|++.. . .+.+.+.+. +.++...-++.... ......... +++
T Consensus 24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a-~~~~~~~~~--~~~------- 93 (175)
T d7mdha1 24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSL-YPLLREVSI--GID------- 93 (175)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT-CTTEEEEEE--ESC-------
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccc-cccccCccc--ccc-------
Confidence 4569999999999999999999753 2 355555544 44555555554422 222222222 111
Q ss_pred HHHHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhc-CC-CcEEEEEc
Q 020854 124 IKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK-RK-KGAIVNIG 192 (320)
Q Consensus 124 ~~~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~-~~-~g~Iv~vs 192 (320)
..+.+.. .|++|..+|.... ...+.+ +.+..|. .+++...+.+.+ .+ ...|+.+|
T Consensus 94 ~~~~~~~--aDvVvi~ag~~rk-----pg~tR~---Dll~~N~----~I~k~~~~~i~~~a~~~~~vlvv~ 150 (175)
T d7mdha1 94 PYEVFED--VDWALLIGAKPRG-----PGMERA---ALLDING----QIFADQGKALNAVASKNVKVLVVG 150 (175)
T ss_dssp HHHHTTT--CSEEEECCCCCCC-----TTCCHH---HHHHHHH----HHHHHHHHHHHHHSCTTCEEEECS
T ss_pred chhhccC--CceEEEeeccCCC-----CCCcHH---HHHHHHH----HHHHHHHHHHHhhCCCCcEEEEec
Confidence 1233443 4499999987542 134443 3445554 344555555555 34 35555554
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=96.79 E-value=0.0021 Score=50.06 Aligned_cols=80 Identities=16% Similarity=0.180 Sum_probs=51.6
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|.+|+|.|+ +|+|...++.+...|+ +|+.+++++++.+ .++++ +... . .|..+.. +.+.+..+....
T Consensus 28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~-~ak~l-----Ga~~-~--i~~~~~~-~~~~~~~~~~~~ 96 (176)
T d2fzwa2 28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFA-RAKEF-----GATE-C--INPQDFS-KPIQEVLIEMTD 96 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH-HHHHH-----TCSE-E--ECGGGCS-SCHHHHHHHHTT
T ss_pred CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHH-HHHHh-----CCcE-E--EeCCchh-hHHHHHHHHHcC
Confidence 5899999998 5999999999999997 5777778887754 34444 2221 2 2332211 223334444444
Q ss_pred CCeEEEEEccCC
Q 020854 131 LDVGVLINNVGI 142 (320)
Q Consensus 131 ~~id~lI~nAG~ 142 (320)
..+|++|.+.|.
T Consensus 97 ~g~D~vid~~G~ 108 (176)
T d2fzwa2 97 GGVDYSFECIGN 108 (176)
T ss_dssp SCBSEEEECSCC
T ss_pred CCCcEeeecCCC
Confidence 467899999873
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.79 E-value=0.021 Score=43.64 Aligned_cols=115 Identities=19% Similarity=0.296 Sum_probs=69.0
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhhcC--CceEEEEEEeCCCCcHHHHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYA--KTQIKSVVVDFSGDLDEGVERIKEA 127 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~ 127 (320)
+...+.|+|+ |.+|..+|..|+.+|. +++++|+++++++..+.++..... +........|.. .
T Consensus 18 ~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~------------~ 84 (159)
T d2ldxa1 18 SRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYN------------V 84 (159)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGG------------G
T ss_pred CCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchh------------h
Confidence 3455777786 9999999999999885 799999999988877777764221 111222112211 1
Q ss_pred HcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC-CCcEEEEEcC
Q 020854 128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGS 193 (320)
Q Consensus 128 ~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-~~g~Iv~vsS 193 (320)
.. +-|++|..||.... + ..+.. +.++. ...+.+...+.+.+. .++.++++|-
T Consensus 85 ~~--~adivvitag~~~~---~--~~~R~---dll~~----N~~i~~~i~~~i~~~~p~~ivivvtN 137 (159)
T d2ldxa1 85 SA--NSKLVIITAGARMV---S--GQTRL---DLLQR----NVAIMKAIVPGVIQNSPDCKIIVVTN 137 (159)
T ss_dssp GT--TEEEEEECCSCCCC---T--TTCSS---CTTHH----HHHHHHHHTTTHHHHSTTCEEEECSS
T ss_pred hc--cccEEEEecccccC---C--CCCHH---HHHHH----HHHHHHHHHHHHhccCCCeEEEEeCC
Confidence 12 46699999997543 1 11211 11222 334456666666544 4566666654
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.79 E-value=0.0052 Score=46.37 Aligned_cols=115 Identities=19% Similarity=0.249 Sum_probs=66.2
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
.+.|+||+|.+|.++|..|+.+|. ++++++.++.+.+ +.++... .. ......-+.. ....+.+...|
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~--a~Dl~~~--~~-~~~~~~~~~~------~~~~~~~~~aD 70 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV--AADLSHI--ET-RATVKGYLGP------EQLPDCLKGCD 70 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH--HHHHTTS--SS-SCEEEEEESG------GGHHHHHTTCS
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh--hHHHhhh--hh-hcCCCeEEcC------CChHHHhCCCC
Confidence 588999999999999999999885 6999998865433 2344221 11 1111111111 12233345445
Q ss_pred eEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcC
Q 020854 133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGS 193 (320)
Q Consensus 133 id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS 193 (320)
++|..||.... + ..+. .+.++.|..-.-.+.+.+.++ .+++.|+++|.
T Consensus 71 --ivVitag~~~~---~--g~sR---~~ll~~N~~i~~~i~~~i~~~---~p~~iiivvtN 118 (144)
T d1mlda1 71 --VVVIPAGVPRK---P--GMTR---DDLFNTNATIVATLTAACAQH---CPDAMICIISN 118 (144)
T ss_dssp --EEEECCSCCCC---T--TCCG---GGGHHHHHHHHHHHHHHHHHH---CTTSEEEECSS
T ss_pred --EEEECCCcCCC---C--CCCc---chHHHHHHHHHHHHHHHHHhc---CCCeEEEEecC
Confidence 99999996432 1 2232 223455655554444444332 34677777765
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=96.78 E-value=0.0066 Score=45.63 Aligned_cols=111 Identities=21% Similarity=0.254 Sum_probs=61.0
Q ss_pred EEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhhcCC-ceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 56 ALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAK-TQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 56 vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
+.|.|+ |.+|..+|..++.+|. ++++.|+++++++..+.++....+. ........| .+.+..
T Consensus 4 I~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~------------~~~~~~-- 68 (142)
T d1y6ja1 4 VAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD------------YSDVKD-- 68 (142)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C------------GGGGTT--
T ss_pred EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc------------HHHhCC--
Confidence 555587 9999999999999885 7999999998876666666532111 112111111 112333
Q ss_pred eEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhc-CCCcEEEEEcC
Q 020854 133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK-RKKGAIVNIGS 193 (320)
Q Consensus 133 id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~-~~~g~Iv~vsS 193 (320)
-|++|..||.... + ..+. .+.+..|. .+++...+.+.+ .+++.++++|-
T Consensus 69 adivvitag~~~~---~--~~~r---~~l~~~N~----~i~~~i~~~i~~~~p~ai~ivvtN 118 (142)
T d1y6ja1 69 CDVIVVTAGANRK---P--GETR---LDLAKKNV----MIAKEVTQNIMKYYNHGVILVVSN 118 (142)
T ss_dssp CSEEEECCCC-----------CH---HHHHHHHH----HHHHHHHHHHHHHCCSCEEEECSS
T ss_pred CceEEEecccccC---c--Ccch---hHHhhHHH----HHHHHHHHHhhccCCCceEEEecC
Confidence 4499999996532 1 1222 33445555 444555555554 45666666644
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=96.78 E-value=0.0024 Score=49.90 Aligned_cols=80 Identities=16% Similarity=0.206 Sum_probs=53.0
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|.+|+|.|+ ||||...++.+...|+ +|+++++++++++. ++++ +.. ..+ |..+. ++..+...+....
T Consensus 28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~-a~~~-----Ga~-~~i--~~~~~-~~~~~~~~~~~~~ 96 (174)
T d1e3ia2 28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPK-AKAL-----GAT-DCL--NPREL-DKPVQDVITELTA 96 (174)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHH-HHHT-----TCS-EEE--CGGGC-SSCHHHHHHHHHT
T ss_pred CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHH-HHHh-----CCC-ccc--CCccc-hhhhhhhHhhhhc
Confidence 5889999975 9999999999999998 58888999988643 3333 221 122 22211 1233444444444
Q ss_pred CCeEEEEEccCC
Q 020854 131 LDVGVLINNVGI 142 (320)
Q Consensus 131 ~~id~lI~nAG~ 142 (320)
..+|++|.++|.
T Consensus 97 ~G~d~vie~~G~ 108 (174)
T d1e3ia2 97 GGVDYSLDCAGT 108 (174)
T ss_dssp SCBSEEEESSCC
T ss_pred CCCcEEEEeccc
Confidence 467899999984
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=96.73 E-value=0.0013 Score=51.07 Aligned_cols=45 Identities=18% Similarity=0.296 Sum_probs=39.4
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSI 97 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l 97 (320)
++|.|+|.|+ ||-|++++..|.+.|+ +|.++.|+.++.+++.+.+
T Consensus 16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~ 61 (167)
T d1npya1 16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY 61 (167)
T ss_dssp TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence 4688999987 9999999999999997 7999999999888776654
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=96.70 E-value=0.038 Score=42.11 Aligned_cols=116 Identities=22% Similarity=0.264 Sum_probs=71.1
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhhcC--CceEEEEEEeCCCCcHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYA--KTQIKSVVVDFSGDLDEGVERIKE 126 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~ 126 (320)
...+.+.|.|+ |.+|.++|..++.+|. ++++.|++++..+..+.++..... .........|..
T Consensus 18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~------------ 84 (160)
T d1i0za1 18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYS------------ 84 (160)
T ss_dssp CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGG------------
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchh------------
Confidence 45677888896 9999999999999985 799999999988777777754211 112211111111
Q ss_pred HHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC-CCcEEEEEcC
Q 020854 127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGS 193 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-~~g~Iv~vsS 193 (320)
.+...| ++|..||.... + ..+.. +.+..|. .+++...+.+.+. .++-++++|-
T Consensus 85 ~~~~ad--iVVitAg~~~~---~--g~tR~---~l~~~N~----~i~~~i~~~i~~~~p~aiiivvtN 138 (160)
T d1i0za1 85 VTANSK--IVVVTAGVRQQ---E--GESRL---NLVQRNV----NVFKFIIPQIVKYSPDCIIIVVSN 138 (160)
T ss_dssp GGTTCS--EEEECCSCCCC---T--TCCGG---GGHHHHH----HHHHHHHHHHHHHCTTCEEEECSS
T ss_pred hccccc--EEEEecCCccc---c--CcchH---HHHHHHH----HHHHHHHHHHHhcCCCcEEEEeCC
Confidence 123335 99999997542 1 22221 2233343 3556666666554 4566666654
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=96.66 E-value=0.0024 Score=48.51 Aligned_cols=43 Identities=16% Similarity=0.207 Sum_probs=37.4
Q ss_pred cccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHH
Q 020854 49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK 91 (320)
Q Consensus 49 ~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~ 91 (320)
++..-|.+.|.||.|-+|..+|+.|.+.|++|.+.+|+.....
T Consensus 5 ~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~ 47 (152)
T d2pv7a2 5 INSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVA 47 (152)
T ss_dssp SCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGH
T ss_pred cCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccccccc
Confidence 4445678999999999999999999999999999999876544
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=96.65 E-value=0.02 Score=42.69 Aligned_cols=112 Identities=16% Similarity=0.258 Sum_probs=66.9
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhhcC-CceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYA-KTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.+.|.|+ |++|..+|..++.+|. ++++.|+++++++....++....+ .........|. +.+..
T Consensus 2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~------------~~~~~- 67 (140)
T d1a5za1 2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY------------ADLKG- 67 (140)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG------------GGGTT-
T ss_pred EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcH------------HHhcC-
Confidence 3567786 8999999999998874 799999999988876666654321 12222222111 11233
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhc-CCCcEEEEEcC
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK-RKKGAIVNIGS 193 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~-~~~g~Iv~vsS 193 (320)
-|++|..||.... ...+. .+.+..|. .+++...+.+.+ .+++.++++|-
T Consensus 68 -adivvitag~~~~-----~g~~r---~dl~~~N~----~I~~~i~~~i~~~~p~aivivvtN 117 (140)
T d1a5za1 68 -SDVVIVAAGVPQK-----PGETR---LQLLGRNA----RVMKEIARNVSKYAPDSIVIVVTN 117 (140)
T ss_dssp -CSEEEECCCCCCC-----SSCCH---HHHHHHHH----HHHHHHHHHHHHHCTTCEEEECSS
T ss_pred -CCEEEEecccccC-----CCcch---hhhhcccc----chHHHHHHHHHhcCCCcEEEEeCC
Confidence 3499999997542 12333 23344454 345555555554 34566666543
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=96.65 E-value=0.011 Score=44.85 Aligned_cols=114 Identities=16% Similarity=0.154 Sum_probs=64.6
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCC---------eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHH
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGL---------NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIK 125 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~---------~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 125 (320)
.|.|+||+|.+|..++..|+..+. +++..+++.++++....++.... ......+...-. ..
T Consensus 6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---------~~ 75 (154)
T d1y7ta1 6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCA-FPLLAGLEATDD---------PK 75 (154)
T ss_dssp EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT-CTTEEEEEEESC---------HH
T ss_pred EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccc-cccccccccCCc---------hh
Confidence 699999999999999999997653 22233455566665555554322 233333333321 12
Q ss_pred HHHcCCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhc-CC-CcEEEEEc
Q 020854 126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK-RK-KGAIVNIG 192 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~-~~-~g~Iv~vs 192 (320)
+.+.. -|++|..+|.... ...+.++ .+..|+. .++...+.+.+ .+ .+.|+.+|
T Consensus 76 ~~~~~--advViitaG~~~~-----pg~~r~d---l~~~N~~----i~~~~~~~i~k~a~~~~~vivvs 130 (154)
T d1y7ta1 76 VAFKD--ADYALLVGAAPRK-----AGMERRD---LLQVNGK----IFTEQGRALAEVAKKDVKVLVVG 130 (154)
T ss_dssp HHTTT--CSEEEECCCCCCC-----TTCCHHH---HHHHHHH----HHHHHHHHHHHHSCTTCEEEECS
T ss_pred hhccc--ccEEEeecCcCCC-----CCCcHHH---HHHHHHH----HHHHHHHHHHHhCCCCcEEEEec
Confidence 33343 4499999997542 2344433 3344444 44555555554 33 45566664
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=96.57 E-value=0.0044 Score=48.08 Aligned_cols=80 Identities=20% Similarity=0.275 Sum_probs=52.4
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|.+|+|.|+ +|+|...+..+...|+ +|+.+++++++++... ++ +.. +.+ |..++ .+..++..+....
T Consensus 28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~-~~-----GAd-~~i--n~~~~-~~~~~~~~~~~~~ 96 (175)
T d1cdoa2 28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VF-----GAT-DFV--NPNDH-SEPISQVLSKMTN 96 (175)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-----TCC-EEE--CGGGC-SSCHHHHHHHHHT
T ss_pred CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHH-Hc-----CCc-EEE--cCCCc-chhHHHHHHhhcc
Confidence 5899999985 7788888888888887 6888999998876432 22 221 222 32222 1223455555544
Q ss_pred CCeEEEEEccCC
Q 020854 131 LDVGVLINNVGI 142 (320)
Q Consensus 131 ~~id~lI~nAG~ 142 (320)
..+|+++.++|.
T Consensus 97 ~G~d~vid~~G~ 108 (175)
T d1cdoa2 97 GGVDFSLECVGN 108 (175)
T ss_dssp SCBSEEEECSCC
T ss_pred CCcceeeeecCC
Confidence 467799999984
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=96.57 E-value=0.0039 Score=44.91 Aligned_cols=40 Identities=18% Similarity=0.068 Sum_probs=35.1
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD 88 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~ 88 (320)
.++++||.++|.||+. +|..-++.|.+.|++|++++....
T Consensus 7 ~l~l~~k~vlVvG~G~-va~~ka~~ll~~ga~v~v~~~~~~ 46 (113)
T d1pjqa1 7 FCQLRDRDCLIVGGGD-VAERKARLLLEAGARLTVNALTFI 46 (113)
T ss_dssp EECCBTCEEEEECCSH-HHHHHHHHHHHTTBEEEEEESSCC
T ss_pred EEEeCCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEeccCC
Confidence 4578899999999855 999999999999999999987654
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=96.57 E-value=0.022 Score=42.63 Aligned_cols=111 Identities=19% Similarity=0.295 Sum_probs=65.6
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhh--cCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAK--YAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.+.|+|+ |.+|.++|..++.+|. ++++.|+++++.+..+.++... ..+. ......+.. +...
T Consensus 3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~-~~i~~~~~~-----------~~~~- 68 (143)
T d1llda1 3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPT-VSIDGSDDP-----------EICR- 68 (143)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTT-CEEEEESCG-----------GGGT-
T ss_pred EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCC-ceeecCCCH-----------HHhh-
Confidence 3666786 9999999999999985 7999999998887766666542 1111 111111111 1122
Q ss_pred CCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC-CCcEEEEEc
Q 020854 131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIG 192 (320)
Q Consensus 131 ~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-~~g~Iv~vs 192 (320)
+-|++|..||.... + ..+.. +.+..|.. +++...+.+.+. +++.++++|
T Consensus 69 -daDvVVitaG~~~~---~--g~~R~---dl~~~N~~----i~~~i~~~i~~~~p~ai~ivvt 118 (143)
T d1llda1 69 -DADMVVITAGPRQK---P--GQSRL---ELVGATVN----ILKAIMPNLVKVAPNAIYMLIT 118 (143)
T ss_dssp -TCSEEEECCCCCCC---T--TCCHH---HHHHHHHH----HHHHHHHHHHHHCTTSEEEECC
T ss_pred -CCcEEEEecccccC---C--CCchh---hhhhhhHH----HHHHHHHHHHhhCCCeEEEEeC
Confidence 23499999996532 1 23432 34455553 444444444443 356666654
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.55 E-value=0.0016 Score=50.52 Aligned_cols=41 Identities=22% Similarity=0.271 Sum_probs=35.6
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV 93 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~ 93 (320)
.|.+|+|.|+ |++|...++.+...|++|+.+++++++++..
T Consensus 27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a 67 (168)
T d1piwa2 27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA 67 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH
T ss_pred CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHh
Confidence 5899999987 8999998887778899999999999887643
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.47 E-value=0.0033 Score=48.37 Aligned_cols=76 Identities=24% Similarity=0.344 Sum_probs=50.7
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|.+|+|.|+ |++|...++.+...|++|+++++++++++... +. +.. ...|-.++ +..+.+.+..++
T Consensus 27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k----~~--Ga~---~~~~~~~~--~~~~~~~~~~~~- 93 (168)
T d1rjwa2 27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK----EL--GAD---LVVNPLKE--DAAKFMKEKVGG- 93 (168)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH----HT--TCS---EEECTTTS--CHHHHHHHHHSS-
T ss_pred CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhh----hc--Ccc---eecccccc--hhhhhcccccCC-
Confidence 4788999875 99999998888889999999999998876432 22 222 12344443 444555555554
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
.|.+|.+++
T Consensus 94 -~~~~v~~~~ 102 (168)
T d1rjwa2 94 -VHAAVVTAV 102 (168)
T ss_dssp -EEEEEESSC
T ss_pred -CceEEeecC
Confidence 335666665
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=96.47 E-value=0.057 Score=40.23 Aligned_cols=112 Identities=13% Similarity=0.186 Sum_probs=65.6
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCC--HHHHHHHHHHHHhhcC-CceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRN--PDKLKDVSDSIQAKYA-KTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~--~~~~~~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
.+.|+||+|.+|.++|..+..+|. ++++.+.+ ++..+..+.++....+ .........|.. .+.
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~------------~~~ 69 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYE------------DTA 69 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGG------------GGT
T ss_pred eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHH------------Hhh
Confidence 478999999999999999999985 69999964 4445444455543111 222222222211 123
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEc
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIG 192 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vs 192 (320)
..| ++|..||.... + ..+. .+.++.|. .+++...+.+.+.. ++.++.+|
T Consensus 70 ~aD--iVvitaG~~~~---~--g~~R---~dl~~~N~----~I~~~i~~~i~~~~p~~i~ivvt 119 (142)
T d1o6za1 70 GSD--VVVITAGIPRQ---P--GQTR---IDLAGDNA----PIMEDIQSSLDEHNDDYISLTTS 119 (142)
T ss_dssp TCS--EEEECCCCCCC---T--TCCH---HHHHHHHH----HHHHHHHHHHHTTCSCCEEEECC
T ss_pred hcC--EEEEecccccc---c--CCch---hhHHHHHH----HHHHHHHHHHHhcCCCceEEEec
Confidence 335 89999996432 2 2233 33444444 45566666666554 45555553
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=96.45 E-value=0.024 Score=42.29 Aligned_cols=112 Identities=17% Similarity=0.200 Sum_probs=63.9
Q ss_pred EEEECCCCcHHHHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHHHhhcC--CceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 56 ALVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPDKLKDVSDSIQAKYA--KTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 56 vlITGas~GIG~ala~~l~~~G--~~Vil~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
+.|+|| |.+|.+++..++..| .++++.|+++++++....++..... .........+ +. +.+.
T Consensus 3 I~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~--~~---------~~~~-- 68 (142)
T d1guza1 3 ITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSN--DY---------ADTA-- 68 (142)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEES--CG---------GGGT--
T ss_pred EEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecC--CH---------HHhc--
Confidence 667796 999999999999988 4899999999877665555533210 1122222111 11 1123
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhc-CCCcEEEEEcC
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK-RKKGAIVNIGS 193 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~-~~~g~Iv~vsS 193 (320)
+-|++|..||.... + ..+. .+.++.|.-- ++...+.+.+ .+++.++++|-
T Consensus 69 dadvvvitag~~~~---~--g~~r---~~l~~~N~~i----~~~i~~~i~~~~p~aivivvtN 119 (142)
T d1guza1 69 NSDIVIITAGLPRK---P--GMTR---EDLLMKNAGI----VKEVTDNIMKHSKNPIIIVVSN 119 (142)
T ss_dssp TCSEEEECCSCCCC---T--TCCH---HHHHHHHHHH----HHHHHHHHHHHCSSCEEEECCS
T ss_pred CCeEEEEEEecCCC---C--CCch---HHHHHHHHHH----HHHHHHHhhccCCCeEEEEecC
Confidence 34599999987442 1 2232 2334445443 4444444443 34566666643
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.44 E-value=0.0034 Score=49.89 Aligned_cols=44 Identities=30% Similarity=0.343 Sum_probs=38.4
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHH
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQ 98 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~ 98 (320)
|.|.|.|| |-+|..+|..++..|++|++.+++++.+++..+.+.
T Consensus 5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~ 48 (192)
T d1f0ya2 5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIE 48 (192)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHH
T ss_pred EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHH
Confidence 67888898 779999999999999999999999988776666554
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=96.41 E-value=0.0019 Score=51.79 Aligned_cols=43 Identities=23% Similarity=0.361 Sum_probs=38.1
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV 93 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~ 93 (320)
+++||+|+|-| .|.+|..+|+.|.+.|++|++++.+.+++...
T Consensus 24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~ 66 (201)
T d1c1da1 24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHA 66 (201)
T ss_dssp CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHH
Confidence 47799999997 78899999999999999999999998876643
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=96.39 E-value=0.037 Score=41.70 Aligned_cols=118 Identities=15% Similarity=0.161 Sum_probs=66.5
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhc--CCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKY--AKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.+.|.|+ |++|.++|..+...+. ++++.|+++++.+..+.++.... ..........+.. +.+.
T Consensus 5 KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~~-----------~~~~-- 70 (150)
T d1t2da1 5 KIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-----------DDLA-- 70 (150)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-----------GGGT--
T ss_pred eEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecccc-----------cccC--
Confidence 4677785 9999999988888774 89999999988777766664321 1222222222211 1122
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC-CCcEEEEEcC
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGS 193 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-~~g~Iv~vsS 193 (320)
+-|++|..+|........-.+.+. .+.+..|. .+.+.+.+.+.+. +++.++++|-
T Consensus 71 ~advvvitag~~~~~g~~~~~~~R---~~l~~~N~----~iv~~i~~~i~~~~p~aivivvtN 126 (150)
T d1t2da1 71 GADVVIVTAGFTKAPGKSDKEWNR---DDLLPLNN----KIMIEIGGHIKKNCPNAFIIVVTN 126 (150)
T ss_dssp TCSEEEECCSCSSCTTCCSTTCCG---GGGHHHHH----HHHHHHHHHHHHHCTTSEEEECSS
T ss_pred CCcEEEEecccccCCCCCccccch---hHHHHHHH----HHHHHHHHHHHhcCCCeEEEEecC
Confidence 344999999975421111111122 22344554 3445555545443 4566666654
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=96.25 E-value=0.096 Score=39.07 Aligned_cols=115 Identities=24% Similarity=0.282 Sum_probs=64.0
Q ss_pred EEEEECCCCcHHHHHHHHHHHc-C--CeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 55 WALVTGPTDGIGKSFAFQLAKT-G--LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~-G--~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.+.|+|++|.+|.++|..|+.+ + .++++.+.++ ..+..+.++........... ..-+++ .+.+...
T Consensus 2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~--~~~~~~--------~~~~~~a 70 (145)
T d2cmda1 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKG--FSGEDA--------TPALEGA 70 (145)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEE--ECSSCC--------HHHHTTC
T ss_pred EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcE--EEcCCC--------ccccCCC
Confidence 4789999999999999988643 4 5899999864 44544555544221122211 111222 1122333
Q ss_pred CeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEcC
Q 020854 132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGS 193 (320)
Q Consensus 132 ~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vsS 193 (320)
| ++|..||.... + ..+. .+.++.|.--.-.+.+.+.+ ..+++.|+++|.
T Consensus 71 D--vvvitaG~~~k---~--g~~R---~dl~~~N~~i~~~v~~~i~~---~~p~aivivvtN 119 (145)
T d2cmda1 71 D--VVLISAGVRRK---P--GMDR---SDLFNVNAGIVKNLVQQVAK---TCPKACIGIITN 119 (145)
T ss_dssp S--EEEECCSCCCC---T--TCCG---GGGHHHHHHHHHHHHHHHHH---HCTTSEEEECSS
T ss_pred C--EEEECCCccCC---C--Ccch---hhHHHHHHHHHHHHHHHHHh---hCCCcEEEEccC
Confidence 5 99999997532 2 2232 23345665444444444332 234666777765
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=96.23 E-value=0.0019 Score=44.86 Aligned_cols=37 Identities=14% Similarity=0.074 Sum_probs=32.8
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD 88 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~ 88 (320)
++||+++|.|. |.-|.++|+.|.++|++|++.+.+..
T Consensus 3 ~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~ 39 (93)
T d2jfga1 3 YQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT 39 (93)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred cCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence 56999999998 66799999999999999999998654
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=96.19 E-value=0.005 Score=47.89 Aligned_cols=41 Identities=22% Similarity=0.291 Sum_probs=36.4
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVS 94 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~ 94 (320)
.|++.|.|| |.+|.++|..|+++|++|.+.+|++++.+...
T Consensus 1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~ 41 (184)
T d1bg6a2 1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQ 41 (184)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 378889998 99999999999999999999999988776544
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.19 E-value=0.07 Score=39.68 Aligned_cols=112 Identities=15% Similarity=0.176 Sum_probs=65.8
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhhcC--CceEEEEEE-eCCCCcHHHHHHHHHHHc
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYA--KTQIKSVVV-DFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~-D~~~~~~~~~~~~~~~~~ 129 (320)
.+.|.|+ |.+|.++|..++.+|. +++++|+++++.+..+.++....+ ......... |.. .+.
T Consensus 2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~~------------~~~ 68 (142)
T d1ojua1 2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYS------------LLK 68 (142)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGG------------GGT
T ss_pred EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCHH------------Hhc
Confidence 3567786 9999999999998884 699999999988776666653211 111122221 211 223
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCC-CcEEEEEcC
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGS 193 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~g~Iv~vsS 193 (320)
. -|++|..||.... + ..+. .+.+..|. .+.+...+.+.+.. ++.++++|-
T Consensus 69 ~--adiVvitag~~~~---~--g~~r---~~l~~~n~----~i~~~i~~~i~~~~p~aivivvtN 119 (142)
T d1ojua1 69 G--SEIIVVTAGLARK---P--GMTR---LDLAHKNA----GIIKDIAKKIVENAPESKILVVTN 119 (142)
T ss_dssp T--CSEEEECCCCCCC---S--SCCH---HHHHHHHH----HHHHHHHHHHHTTSTTCEEEECSS
T ss_pred c--ccEEEEeccccCC---C--CCch---HHHHHHhh----HHHHHHHHHHHhhCCCcEEEEecC
Confidence 3 3489999986432 1 2233 23334444 34555555555544 566666544
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=96.17 E-value=0.033 Score=41.59 Aligned_cols=112 Identities=16% Similarity=0.221 Sum_probs=63.0
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhc--CCceEEEEEE-eCCCCcHHHHHHHHHHHc
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKY--AKTQIKSVVV-DFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~-D~~~~~~~~~~~~~~~~~ 129 (320)
|.+.|+|+ |.+|.++|..|+.++. ++++.+.++++.+..+.++.... .......... |.. .+.
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~------------~~~ 68 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYA------------DTA 68 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGG------------GGT
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHH------------Hhc
Confidence 35666686 9999999999998885 89999998887776666653211 0111111111 111 112
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcC-CCcEEEEEc
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIG 192 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-~~g~Iv~vs 192 (320)
+-|++|..||.... + ..+. .+.+..|. .+++...+.+.+. +++.++++|
T Consensus 69 --~advvvitag~~~~---~--~~~r---~dl~~~N~----~i~~~i~~~i~k~~p~aivivvt 118 (142)
T d1uxja1 69 --NSDVIVVTSGAPRK---P--GMSR---EDLIKVNA----DITRACISQAAPLSPNAVIIMVN 118 (142)
T ss_dssp --TCSEEEECCSCC-----------------CHHHHH----HHHHHHHHHHGGGCTTCEEEECS
T ss_pred --CCCEEEEeeeccCC---c--Ccch---hHHHhHHH----HHHHHHHHHHhccCCCceEEEeC
Confidence 34489999997542 1 1122 23334454 4566666666654 456555554
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=96.17 E-value=0.0029 Score=49.84 Aligned_cols=87 Identities=17% Similarity=0.153 Sum_probs=54.2
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHH-HHHHHHhhcCCceEEEEEEeCCCCcHHHH-HHHHHHH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD-VSDSIQAKYAKTQIKSVVVDFSGDLDEGV-ERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~-~~~~l~~~~~~~~~~~~~~D~~~~~~~~~-~~~~~~~ 128 (320)
+.||++.|.|.+. ||+.+++.+...|++|+..+|+..+... ...++.+......+..+.+.++++....+ ++..+..
T Consensus 40 l~gk~vgIiG~G~-IG~~va~~l~~~g~~v~~~d~~~~~~~~~~~~~l~ell~~sDiv~~~~pl~~~t~~li~~~~l~~m 118 (181)
T d1qp8a1 40 IQGEKVAVLGLGE-IGTRVGKILAALGAQVRGFSRTPKEGPWRFTNSLEEALREARAAVCALPLNKHTRGLVKYQHLALM 118 (181)
T ss_dssp CTTCEEEEESCST-HHHHHHHHHHHTTCEEEEECSSCCCSSSCCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTTS
T ss_pred ccCceEEEecccc-ccccceeeeeccccccccccccccccceeeeechhhhhhccchhhcccccccccccccccceeeec
Confidence 7899999999755 9999999999999999999986532110 01112222235667777777765433333 3333333
Q ss_pred cCCCeEEEEEccC
Q 020854 129 EGLDVGVLINNVG 141 (320)
Q Consensus 129 ~~~~id~lI~nAG 141 (320)
+.. .++-|+|
T Consensus 119 k~~---ailIN~~ 128 (181)
T d1qp8a1 119 AED---AVFVNVG 128 (181)
T ss_dssp CTT---CEEEECS
T ss_pred ccc---ceEEecc
Confidence 332 4444555
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=96.06 E-value=0.0062 Score=46.99 Aligned_cols=75 Identities=15% Similarity=0.156 Sum_probs=50.4
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|.+|+|.|+ ||+|...++-+-..|+++++++++.++.+ ..+++ +... . +|..++ + .... ...
T Consensus 30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~-~a~~l-----Gad~-~--i~~~~~--~---~~~~--~~~ 92 (168)
T d1uufa2 30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKRE-AAKAL-----GADE-V--VNSRNA--D---EMAA--HLK 92 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHH-----TCSE-E--EETTCH--H---HHHT--TTT
T ss_pred CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHH-HHhcc-----CCcE-E--EECchh--h---HHHH--hcC
Confidence 4899999986 99999999888889999999999988764 33444 2221 1 343332 1 1111 112
Q ss_pred CeEEEEEccCCC
Q 020854 132 DVGVLINNVGIS 143 (320)
Q Consensus 132 ~id~lI~nAG~~ 143 (320)
.+|++|.++|..
T Consensus 93 ~~D~vid~~g~~ 104 (168)
T d1uufa2 93 SFDFILNTVAAP 104 (168)
T ss_dssp CEEEEEECCSSC
T ss_pred CCceeeeeeecc
Confidence 578999998853
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.06 E-value=0.015 Score=45.69 Aligned_cols=89 Identities=19% Similarity=0.172 Sum_probs=55.4
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH-----HHHhhcCCceEEEEEEeCCCCcHHHH-HH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSD-----SIQAKYAKTQIKSVVVDFSGDLDEGV-ER 123 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~~D~~~~~~~~~-~~ 123 (320)
.+.||++.|.| .|.||+++++.+...|.+|+..++...+...... ++.+....+.+..+.+.++++-+..+ ++
T Consensus 41 ~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~~~~~~~l~ell~~sDiv~~~~Plt~~T~~lin~~ 119 (184)
T d1ygya1 41 EIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIELLSLDDLLARADFISVHLPKTPETAGLIDKE 119 (184)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHHTCEECCHHHHHHHCSEEEECCCCSTTTTTCBCHH
T ss_pred cccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCChhHHhhcCceeccHHHHHhhCCEEEEcCCCCchhhhhhhHH
Confidence 47799999988 6999999999999999999999986433221110 11111123567777777776533333 23
Q ss_pred HHHHHcCCCeEEEEEccCC
Q 020854 124 IKEAIEGLDVGVLINNVGI 142 (320)
Q Consensus 124 ~~~~~~~~~id~lI~nAG~ 142 (320)
.. ...+.+.++-|.|-
T Consensus 120 ~l---~~mk~~a~lIN~sR 135 (184)
T d1ygya1 120 AL---AKTKPGVIIVNAAR 135 (184)
T ss_dssp HH---TTSCTTEEEEECSC
T ss_pred HH---hhhCCCceEEEecc
Confidence 33 33333356666654
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=96.06 E-value=0.016 Score=43.69 Aligned_cols=75 Identities=11% Similarity=0.089 Sum_probs=54.2
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCeE
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG 134 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 134 (320)
+++|.|. |-+|..++++|.+.|.+|++++.++++..+..++... ..+.++..|.+|. .+.++.+-.+-|
T Consensus 5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~----~~~~vi~Gd~~d~------~~L~~a~i~~a~ 73 (153)
T d1id1a_ 5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG----DNADVIPGDSNDS------SVLKKAGIDRCR 73 (153)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC----TTCEEEESCTTSH------HHHHHHTTTTCS
T ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhc----CCcEEEEccCcch------HHHHHhccccCC
Confidence 5777777 7999999999999999999999998876666655543 3467788898875 333333333344
Q ss_pred EEEEcc
Q 020854 135 VLINNV 140 (320)
Q Consensus 135 ~lI~nA 140 (320)
.+|...
T Consensus 74 ~vi~~~ 79 (153)
T d1id1a_ 74 AILALS 79 (153)
T ss_dssp EEEECS
T ss_pred EEEEcc
Confidence 777554
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=95.94 E-value=0.0055 Score=48.29 Aligned_cols=44 Identities=20% Similarity=0.245 Sum_probs=37.5
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHH
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQ 98 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~ 98 (320)
|.|.|.|| |-+|..+|..++..|++|++.+++.+.+++..+.+.
T Consensus 5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~ 48 (186)
T d1wdka3 5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAA 48 (186)
T ss_dssp SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHH
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhh
Confidence 45778888 789999999999999999999999988776655543
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=95.92 E-value=0.0069 Score=46.47 Aligned_cols=38 Identities=29% Similarity=0.278 Sum_probs=32.3
Q ss_pred EEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH
Q 020854 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVS 94 (320)
Q Consensus 56 vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~ 94 (320)
+.|.|. |-+|.++|+.|.+.|++|+..+|+++..++..
T Consensus 3 I~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~ 40 (165)
T d2f1ka2 3 IGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAV 40 (165)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred EEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHH
Confidence 556654 99999999999999999999999988776544
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=95.72 E-value=0.018 Score=44.70 Aligned_cols=41 Identities=15% Similarity=0.272 Sum_probs=34.7
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSD 95 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~ 95 (320)
+.+-|.|- |-+|.++|+.|++.|++|++.+|++++.+++.+
T Consensus 3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~ 43 (176)
T d2pgda2 3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLA 43 (176)
T ss_dssp BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHH
T ss_pred CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH
Confidence 34556665 899999999999999999999999998877644
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=95.64 E-value=0.027 Score=44.59 Aligned_cols=88 Identities=17% Similarity=0.130 Sum_probs=52.7
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHH----HHHHHhhcCCceEEEEEEeCCCCcHHHH-HHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV----SDSIQAKYAKTQIKSVVVDFSGDLDEGV-ERI 124 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~----~~~l~~~~~~~~~~~~~~D~~~~~~~~~-~~~ 124 (320)
.++||++.|.|- |.||+.+|+.+...|++|+..++......+. ..++.+..+...+..+.+..+++.+..+ ++.
T Consensus 40 el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~~~~~~~~l~~~l~~sDii~~~~plt~~T~~li~~~~ 118 (197)
T d1j4aa1 40 EVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNPELEKKGYYVDSLDDLYKQADVISLHVPDVPANVHMINDES 118 (197)
T ss_dssp CGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCHHHHHTTCBCSCHHHHHHHCSEEEECSCCCGGGTTCBSHHH
T ss_pred cccCCeEEEecc-cccchhHHHhHhhhcccccccCcccccccccceeeeccccccccccccccccCCccccccccccHHH
Confidence 377999999985 8999999999999999999998754321111 0111111113456666666664322222 333
Q ss_pred HHHHcCCCeEEEEEccC
Q 020854 125 KEAIEGLDVGVLINNVG 141 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG 141 (320)
.+..+.. .++-|+|
T Consensus 119 l~~mk~~---a~lIN~s 132 (197)
T d1j4aa1 119 IAKMKQD---VVIVNVS 132 (197)
T ss_dssp HHHSCTT---EEEEECS
T ss_pred HhhhCCc---cEEEecC
Confidence 4444443 4444554
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=95.63 E-value=0.011 Score=48.55 Aligned_cols=63 Identities=24% Similarity=0.317 Sum_probs=50.7
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCC-------------------HHHHHHHHHHHHhhcCCceEEEE
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRN-------------------PDKLKDVSDSIQAKYAKTQIKSV 109 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~ 109 (320)
++++++|+|.| .||+|..+++.|+..|. +++++|.+ ..+.+.+.+.+++.+++..+..+
T Consensus 27 kL~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~ 105 (247)
T d1jw9b_ 27 ALKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV 105 (247)
T ss_dssp HHHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhh
Confidence 46789999999 68999999999999997 78898853 23667788888888888777766
Q ss_pred EEeC
Q 020854 110 VVDF 113 (320)
Q Consensus 110 ~~D~ 113 (320)
...+
T Consensus 106 ~~~~ 109 (247)
T d1jw9b_ 106 NALL 109 (247)
T ss_dssp CSCC
T ss_pred hhhh
Confidence 5443
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.57 E-value=0.0053 Score=46.48 Aligned_cols=38 Identities=24% Similarity=0.334 Sum_probs=33.6
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCC
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN 86 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~ 86 (320)
.++++||++||.|| |.+|..-++.|.+.|++|++++..
T Consensus 8 ~~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~ 45 (150)
T d1kyqa1 8 AHQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD 45 (150)
T ss_dssp EECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred heeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 34688999999999 569999999999999999999754
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.54 E-value=0.0063 Score=54.39 Aligned_cols=65 Identities=14% Similarity=0.199 Sum_probs=52.3
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCC-------------------HHHHHHHHHHHHhhcCCceEEEEE
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRN-------------------PDKLKDVSDSIQAKYAKTQIKSVV 110 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~ 110 (320)
+++..|+|.|+ ||+|.++++.|+..|. ++.++|.+ ..+.+.+++.+++.+++.++..+.
T Consensus 35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~ 113 (426)
T d1yovb1 35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHF 113 (426)
T ss_dssp HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEC
T ss_pred HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeee
Confidence 55778999998 7899999999999998 79998863 235677788888888888888877
Q ss_pred EeCCCC
Q 020854 111 VDFSGD 116 (320)
Q Consensus 111 ~D~~~~ 116 (320)
.++.+.
T Consensus 114 ~~i~~~ 119 (426)
T d1yovb1 114 NKIQDF 119 (426)
T ss_dssp SCGGGB
T ss_pred ccccch
Confidence 666543
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=95.51 E-value=0.12 Score=38.91 Aligned_cols=78 Identities=24% Similarity=0.286 Sum_probs=45.2
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCC-------eEEEEeCCH--HHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHH
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGL-------NLVLVGRNP--DKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIK 125 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~-------~Vil~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 125 (320)
.|.|+||+|.+|.+++..|+..+. .+++.+.++ ++++....++.... ......+.. .+. ..
T Consensus 5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~-~~~~~~~~~--~~~-------~~ 74 (154)
T d5mdha1 5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCA-LPLLKDVIA--TDK-------EE 74 (154)
T ss_dssp EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTC-CTTEEEEEE--ESC-------HH
T ss_pred EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccc-ccccccccc--Ccc-------cc
Confidence 699999999999999999987542 356666544 33444444343321 222222222 222 11
Q ss_pred HHHcCCCeEEEEEccCCCC
Q 020854 126 EAIEGLDVGVLINNVGISY 144 (320)
Q Consensus 126 ~~~~~~~id~lI~nAG~~~ 144 (320)
+.+. +.|++|..+|...
T Consensus 75 ~~~~--~~dvVVitag~~~ 91 (154)
T d5mdha1 75 IAFK--DLDVAILVGSMPR 91 (154)
T ss_dssp HHTT--TCSEEEECCSCCC
T ss_pred cccC--CceEEEEecccCC
Confidence 2233 3449999999754
|
| >d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Phosphopantothenoylcysteine synthetase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.29 E-value=0.023 Score=47.88 Aligned_cols=26 Identities=15% Similarity=0.227 Sum_probs=22.5
Q ss_pred CCCcHHHHHHHHHHHcCCeEEEEeCC
Q 020854 61 PTDGIGKSFAFQLAKTGLNLVLVGRN 86 (320)
Q Consensus 61 as~GIG~ala~~l~~~G~~Vil~~r~ 86 (320)
+||..|.++|+++..+|+.|+++.+.
T Consensus 44 SSGk~G~alA~~~~~~Ga~V~li~g~ 69 (290)
T d1p9oa_ 44 SSGRRGATSAEAFLAAGYGVLFLYRA 69 (290)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CchHHHHHHHHHHHHcCCEEEEEecC
Confidence 35679999999999999999998643
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=95.26 E-value=0.014 Score=44.76 Aligned_cols=45 Identities=22% Similarity=0.448 Sum_probs=39.5
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD 92 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~ 92 (320)
..++.||.++|.|.|.=.|+.++.-|.++|++|+++.+....+.+
T Consensus 32 ~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~ 76 (166)
T d1b0aa1 32 NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRH 76 (166)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHH
T ss_pred CcccccceEEEEeccccccHHHHHHHHHhhccccccccccchhHH
Confidence 456789999999999999999999999999999999877665543
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=95.20 E-value=0.029 Score=44.27 Aligned_cols=89 Identities=11% Similarity=0.154 Sum_probs=53.8
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHH------HHHHHhhcCCceEEEEEEeCCCCcHHHH-H
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV------SDSIQAKYAKTQIKSVVVDFSGDLDEGV-E 122 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~------~~~l~~~~~~~~~~~~~~D~~~~~~~~~-~ 122 (320)
.++||++.|.| -|.||+++|+.+...|++|+..++........ ..++.+......+..+.+..+++.+..+ +
T Consensus 46 eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~l~~ll~~sD~i~~~~plt~~T~~li~~ 124 (193)
T d1mx3a1 46 RIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLIND 124 (193)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTCTTSBSH
T ss_pred eeeCceEEEec-cccccccceeeeeccccceeeccCcccccchhhhccccccchhhccccCCEEEEeecccccchhhhhH
Confidence 37799999996 58999999999999999999999853321110 0011111123467777777776433332 2
Q ss_pred HHHHHHcCCCeEEEEEccCC
Q 020854 123 RIKEAIEGLDVGVLINNVGI 142 (320)
Q Consensus 123 ~~~~~~~~~~id~lI~nAG~ 142 (320)
+..+..+ .+.++-|.|-
T Consensus 125 ~~l~~mk---~~a~lIN~sR 141 (193)
T d1mx3a1 125 FTVKQMR---QGAFLVNTAR 141 (193)
T ss_dssp HHHTTSC---TTEEEEECSC
T ss_pred HHHhccC---CCCeEEecCC
Confidence 2333333 3355556553
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=95.15 E-value=0.063 Score=41.96 Aligned_cols=84 Identities=11% Similarity=0.104 Sum_probs=55.0
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHH-------HHHHHHHHHhhcCCceEEEEEEeCCCCcHHHH-
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK-------LKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGV- 121 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~- 121 (320)
.+.|+++.|. |.|.||+.+|+.+...|++|+..++.... .+.+ +++-+ ...+..+.+.++++-...+
T Consensus 41 ~l~~~~vgii-G~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~l-~ell~---~sDii~i~~plt~~T~~li~ 115 (188)
T d1sc6a1 41 EARGKKLGII-GYGHIGTQLGILAESLGMYVYFYDIENKLPLGNATQVQHL-SDLLN---MSDVVSLHVPENPSTKNMMG 115 (188)
T ss_dssp CSTTCEEEEE-CCSHHHHHHHHHHHHTTCEEEEECSSCCCCCTTCEECSCH-HHHHH---HCSEEEECCCSSTTTTTCBC
T ss_pred cccceEEEEe-ecccchhhhhhhcccccceEeeccccccchhhhhhhhhhH-HHHHh---hccceeecccCCcchhhhcc
Confidence 4779999998 56899999999999999999999975321 0111 22222 3467777777776433333
Q ss_pred HHHHHHHcCCCeEEEEEcc
Q 020854 122 ERIKEAIEGLDVGVLINNV 140 (320)
Q Consensus 122 ~~~~~~~~~~~id~lI~nA 140 (320)
++..+.++... +|||.+
T Consensus 116 ~~~l~~mk~~a--~lIN~a 132 (188)
T d1sc6a1 116 AKEISLMKPGS--LLINAS 132 (188)
T ss_dssp HHHHHHSCTTE--EEEECS
T ss_pred HHHHhhCCCCC--EEEEcC
Confidence 55555555533 455444
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.08 E-value=0.013 Score=45.28 Aligned_cols=45 Identities=16% Similarity=0.184 Sum_probs=40.2
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD 92 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~ 92 (320)
.++++||.++|.|-|.=.|+-++.-|+++|++|.++.+....+.+
T Consensus 34 ~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~~ 78 (170)
T d1a4ia1 34 GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDE 78 (170)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHH
T ss_pred CcccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHHH
Confidence 556889999999999999999999999999999999987766543
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.07 E-value=0.025 Score=43.68 Aligned_cols=40 Identities=28% Similarity=0.400 Sum_probs=36.1
Q ss_pred cccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCC
Q 020854 47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN 86 (320)
Q Consensus 47 ~~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~ 86 (320)
...+++||.++|.|-|.=.|+-++..|+++|+.|..+..+
T Consensus 23 ~g~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~ 62 (171)
T d1edza1 23 EGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 62 (171)
T ss_dssp TTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred ccCCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence 3457889999999999999999999999999999988765
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=94.95 E-value=0.072 Score=41.75 Aligned_cols=89 Identities=13% Similarity=0.107 Sum_probs=53.7
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-------HHHHhhcCCceEEEEEEeCCCCcHHHH-
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVS-------DSIQAKYAKTQIKSVVVDFSGDLDEGV- 121 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~-------~~l~~~~~~~~~~~~~~D~~~~~~~~~- 121 (320)
.++||++.|.|. |.||+++|+.+...|.+|+..++......... .++.+......+..+.+.++++-+..+
T Consensus 44 ~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~~l~~ll~~sD~v~l~~plt~~T~~li~ 122 (191)
T d1gdha1 44 KLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFN 122 (191)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTTTTCBS
T ss_pred eecccceEEeec-ccchHHHHHHHHhhccccccccccccccchhhcccccccCCHHHHHhhCCeEEecCCCCchHhheec
Confidence 467999999975 88999999999999999999987533211110 011111123467777777776433333
Q ss_pred HHHHHHHcCCCeEEEEEccCC
Q 020854 122 ERIKEAIEGLDVGVLINNVGI 142 (320)
Q Consensus 122 ~~~~~~~~~~~id~lI~nAG~ 142 (320)
++.. ...+.+.++-|.|-
T Consensus 123 ~~~l---~~mk~~a~lIN~sR 140 (191)
T d1gdha1 123 KATI---KSLPQGAIVVNTAR 140 (191)
T ss_dssp HHHH---TTSCTTEEEEECSC
T ss_pred HHHh---hCcCCccEEEecCC
Confidence 2333 33333355556553
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=94.81 E-value=0.019 Score=45.16 Aligned_cols=89 Identities=11% Similarity=0.082 Sum_probs=55.2
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-------HHHHhhcCCceEEEEEEeCCCCcHHHH-
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVS-------DSIQAKYAKTQIKSVVVDFSGDLDEGV- 121 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~-------~~l~~~~~~~~~~~~~~D~~~~~~~~~- 121 (320)
.+.|+++.|.| .|.||+++++.+...|.+|+..++......... .++.+......+..+.+.++++-+..+
T Consensus 41 ~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~~l~~~l~~sD~v~~~~plt~~T~~li~ 119 (188)
T d2naca1 41 DLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPETEHMIN 119 (188)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTTTTTCBS
T ss_pred eccccceeecc-ccccchhhhhhhhccCceEEEEeeccccccccccccccccCCHHHHHHhccchhhcccccccchhhhH
Confidence 46799999998 588999999999999999999998532211111 112222235667777777776533333
Q ss_pred HHHHHHHcCCCeEEEEEccCC
Q 020854 122 ERIKEAIEGLDVGVLINNVGI 142 (320)
Q Consensus 122 ~~~~~~~~~~~id~lI~nAG~ 142 (320)
.+..+.++. +.++-|.|-
T Consensus 120 ~~~l~~mk~---ga~lIN~aR 137 (188)
T d2naca1 120 DETLKLFKR---GAYIVNTAR 137 (188)
T ss_dssp HHHHTTSCT---TEEEEECSC
T ss_pred HHHHHhCCC---CCEEEecCc
Confidence 333333333 355556553
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=94.64 E-value=0.034 Score=44.07 Aligned_cols=86 Identities=12% Similarity=0.007 Sum_probs=52.8
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHH------HHHHHHHhhcCCceEEEEEEeCCCCcHHHH-H
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK------DVSDSIQAKYAKTQIKSVVVDFSGDLDEGV-E 122 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~------~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~-~ 122 (320)
.+.||++.|.|. |.||+++|+.+...|++|+..++...+.. ...+++-. ...+..+.+-.+++-+..+ +
T Consensus 42 ~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~l~~l~~---~~D~v~~~~plt~~T~~li~~ 117 (199)
T d1dxya1 42 ELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPMKGDHPDFDYVSLEDLFK---QSDVIDLHVPGIEQNTHIINE 117 (199)
T ss_dssp CGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSSCCTTCEECCHHHHHH---HCSEEEECCCCCGGGTTSBCH
T ss_pred cccceeeeeeec-ccccccccccccccceeeeccCCccchhhhcchhHHHHHHHHH---hcccceeeecccccccccccH
Confidence 467999999985 78999999999999999999998542210 01122222 3456666666665422222 3
Q ss_pred HHHHHHcCCCeEEEEEccCC
Q 020854 123 RIKEAIEGLDVGVLINNVGI 142 (320)
Q Consensus 123 ~~~~~~~~~~id~lI~nAG~ 142 (320)
+..+.++.. .++-|+|-
T Consensus 118 ~~l~~mk~~---a~lIN~aR 134 (199)
T d1dxya1 118 AAFNLMKPG---AIVINTAR 134 (199)
T ss_dssp HHHHHSCTT---EEEEECSC
T ss_pred HHhhccCCc---eEEEeccc
Confidence 444444443 45445543
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=94.56 E-value=0.033 Score=42.98 Aligned_cols=36 Identities=17% Similarity=0.359 Sum_probs=32.7
Q ss_pred CCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHH
Q 020854 61 PTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDS 96 (320)
Q Consensus 61 as~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~ 96 (320)
|.|-+|.++|++|++.|++|.+.+|++++.+++.++
T Consensus 8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~ 43 (178)
T d1pgja2 8 GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA 43 (178)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc
Confidence 678999999999999999999999999988877655
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=94.10 E-value=0.022 Score=43.22 Aligned_cols=34 Identities=24% Similarity=0.218 Sum_probs=30.8
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHH
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK 89 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~ 89 (320)
.+.|.|+ |.+|..++..|++.|++|.+++|+.+.
T Consensus 2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~ 35 (167)
T d1ks9a2 2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQP 35 (167)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHH
Confidence 4788888 999999999999999999999998754
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=93.84 E-value=0.051 Score=41.20 Aligned_cols=39 Identities=31% Similarity=0.428 Sum_probs=32.5
Q ss_pred EEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH
Q 020854 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSD 95 (320)
Q Consensus 56 vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~ 95 (320)
+-|. |.|-+|.++|+.|++.|++|++.+|++++.++..+
T Consensus 3 IgiI-GlG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~ 41 (161)
T d1vpda2 3 VGFI-GLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA 41 (161)
T ss_dssp EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred EEEE-ehhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHH
Confidence 4444 45999999999999999999999999988766543
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.58 E-value=0.091 Score=39.94 Aligned_cols=42 Identities=24% Similarity=0.345 Sum_probs=37.1
Q ss_pred cccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHH
Q 020854 47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK 89 (320)
Q Consensus 47 ~~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~ 89 (320)
.++.+.||+|+|.|= |-||+.+|+.+...|++|++++.++.+
T Consensus 18 t~~~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~ 59 (163)
T d1li4a1 18 TDVMIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPIN 59 (163)
T ss_dssp HCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred hCceecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccch
Confidence 356688999999975 589999999999999999999999855
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=93.58 E-value=0.056 Score=40.64 Aligned_cols=37 Identities=14% Similarity=0.321 Sum_probs=32.7
Q ss_pred CCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHH
Q 020854 61 PTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI 97 (320)
Q Consensus 61 as~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l 97 (320)
|+|-+|.++++.|.+.|++|++.+|+.++.++..++.
T Consensus 7 G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~ 43 (152)
T d2ahra2 7 GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL 43 (152)
T ss_dssp CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence 6789999999999999999999999998887766544
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=93.55 E-value=0.24 Score=35.01 Aligned_cols=34 Identities=18% Similarity=0.181 Sum_probs=29.8
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP 87 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~ 87 (320)
.|.++|.|| |-+|.++|..|++.|.+|.++.|..
T Consensus 22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~ 55 (117)
T d1ebda2 22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAG 55 (117)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCeEEEECC-CccceeeeeeecccccEEEEEEecc
Confidence 477888876 7899999999999999999998754
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=93.51 E-value=0.063 Score=40.76 Aligned_cols=38 Identities=16% Similarity=0.156 Sum_probs=32.0
Q ss_pred EEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH
Q 020854 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVS 94 (320)
Q Consensus 56 vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~ 94 (320)
|-+. |.|-+|.++|+.|++.|++|.+.+|+.++.+...
T Consensus 4 Ig~I-GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~ 41 (162)
T d3cuma2 4 IAFI-GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLV 41 (162)
T ss_dssp EEEE-CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHH
T ss_pred EEEE-EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhh
Confidence 4444 6699999999999999999999999988766543
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=93.50 E-value=0.073 Score=39.88 Aligned_cols=40 Identities=18% Similarity=0.304 Sum_probs=33.3
Q ss_pred EEEECCCCcHHHHHHHHHHHcC-CeEEEEeCCHHHHHHHHHH
Q 020854 56 ALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDS 96 (320)
Q Consensus 56 vlITGas~GIG~ala~~l~~~G-~~Vil~~r~~~~~~~~~~~ 96 (320)
+.+.|+ |-+|.++++.|.+.| .+|.+.+|+.++.+++.++
T Consensus 3 I~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~ 43 (152)
T d1yqga2 3 VYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE 43 (152)
T ss_dssp EEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH
T ss_pred EEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh
Confidence 556665 999999999999888 7999999999887766553
|
| >d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 3, PRMT3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.46 E-value=0.18 Score=42.31 Aligned_cols=76 Identities=18% Similarity=0.123 Sum_probs=53.5
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
.+||+||-.|++.|+ ++..+++.|+ +|+.++.++.. ....+...+.+...++..+..|+.+-. ++
T Consensus 34 ~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~-~~a~~~~~~~~~~~~i~~~~~~~~~l~----------~~ 99 (311)
T d2fyta1 34 FKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEIL-YQAMDIIRLNKLEDTITLIKGKIEEVH----------LP 99 (311)
T ss_dssp TTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHH-HHHHHHHHHTTCTTTEEEEESCTTTSC----------CS
T ss_pred CCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHH-HHHHHHHHHhCCCccceEEEeeHHHhc----------Cc
Confidence 469999999999886 5667778897 79999988754 344444555555667888888877631 12
Q ss_pred CCCeEEEEEcc
Q 020854 130 GLDVGVLINNV 140 (320)
Q Consensus 130 ~~~id~lI~nA 140 (320)
...+|+|+...
T Consensus 100 ~~~~D~Ivse~ 110 (311)
T d2fyta1 100 VEKVDVIISEW 110 (311)
T ss_dssp CSCEEEEEECC
T ss_pred cccceEEEEee
Confidence 23688998753
|
| >d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermotoga maritima [TaxId: 2336]
Probab=92.89 E-value=0.12 Score=40.35 Aligned_cols=83 Identities=10% Similarity=0.139 Sum_probs=62.6
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
+.++=+|.|+||...++.+.+ . +.+|+.+|++++.++...+.+... +.++.++..+.++ +..+.+.++...
T Consensus 25 ~~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~--~~r~~~~~~~f~~-----~~~~~~~~~~~~ 95 (192)
T d1m6ya2 25 KIILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEF--SDRVSLFKVSYRE-----ADFLLKTLGIEK 95 (192)
T ss_dssp CEEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGG--TTTEEEEECCGGG-----HHHHHHHTTCSC
T ss_pred CEEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccc--cccccchhHHHhh-----HHHHHHHcCCCC
Confidence 344447999999999999987 3 468999999999988777666443 4568888887764 255566666557
Q ss_pred eEEEEEccCCCC
Q 020854 133 VGVLINNVGISY 144 (320)
Q Consensus 133 id~lI~nAG~~~ 144 (320)
+|.++...|++.
T Consensus 96 vdgIl~DlGvSs 107 (192)
T d1m6ya2 96 VDGILMDLGVST 107 (192)
T ss_dssp EEEEEEECSCCH
T ss_pred cceeeeccchhH
Confidence 899999999864
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=92.81 E-value=0.11 Score=39.34 Aligned_cols=40 Identities=25% Similarity=0.413 Sum_probs=32.9
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHH
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVS 94 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~~~~~~~~ 94 (320)
|.++|.| .|-||.++|+.|.+.|+ +|+..++|.+.++...
T Consensus 2 k~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~ 43 (171)
T d2g5ca2 2 QNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV 43 (171)
T ss_dssp CEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH
T ss_pred CEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHH
Confidence 4578887 49999999999999996 6888999988776544
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=92.78 E-value=0.29 Score=34.91 Aligned_cols=34 Identities=29% Similarity=0.414 Sum_probs=29.8
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP 87 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~ 87 (320)
++.++|.|| |-+|.++|..|+++|.+|.++.+++
T Consensus 30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~ 63 (121)
T d1d7ya2 30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQP 63 (121)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCeEEEECc-chhHHHHHHHhhcccceEEEEeecc
Confidence 577877775 8999999999999999999999865
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=92.76 E-value=0.06 Score=42.13 Aligned_cols=39 Identities=23% Similarity=0.325 Sum_probs=32.2
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV 93 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~ 93 (320)
+.+.|.|| |..|.++|..|++.|++|.+.+|+++..+++
T Consensus 8 ~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i 46 (189)
T d1n1ea2 8 NKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLV 46 (189)
T ss_dssp EEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHH
T ss_pred ceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHH
Confidence 34677776 5699999999999999999999998766544
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=92.75 E-value=0.5 Score=35.81 Aligned_cols=77 Identities=10% Similarity=0.186 Sum_probs=40.8
Q ss_pred CEEEEECCCCcHHHHHHHHHHHc-----CCeEEEEeCCHHHHHHHHHHHHh----hcCCceEEEEEEeCCCCcHHHHHHH
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKT-----GLNLVLVGRNPDKLKDVSDSIQA----KYAKTQIKSVVVDFSGDLDEGVERI 124 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~-----G~~Vil~~r~~~~~~~~~~~l~~----~~~~~~~~~~~~D~~~~~~~~~~~~ 124 (320)
-.+.|.||++.....+...+..+ +.+|+++|.++++++...+.+.. .+...++.. .- ..
T Consensus 4 ~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----------d~ 71 (167)
T d1u8xx1 4 FSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAA-TT-----------DP 71 (167)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEE-ES-----------CH
T ss_pred ceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEe-cC-----------Ch
Confidence 34666677553222233333322 24799999999998755544432 111222221 11 12
Q ss_pred HHHHcCCCeEEEEEccCCCC
Q 020854 125 KEAIEGLDVGVLINNVGISY 144 (320)
Q Consensus 125 ~~~~~~~~id~lI~nAG~~~ 144 (320)
.+.+...| +||+.+|...
T Consensus 72 ~eal~~AD--~Vvitag~~~ 89 (167)
T d1u8xx1 72 EEAFTDVD--FVMAHIRVGK 89 (167)
T ss_dssp HHHHSSCS--EEEECCCTTH
T ss_pred hhccCCCC--EEEECCCcCC
Confidence 33345445 9999999754
|
| >d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical protein PH0226 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=92.62 E-value=0.77 Score=35.65 Aligned_cols=74 Identities=18% Similarity=0.164 Sum_probs=53.0
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
+.+||=.|++.|. ++..|++.|++|+.++.+.+.++...+..... +..+..+..|..+-. +....
T Consensus 38 ~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~--~~~~~~~~~d~~~l~----------~~~~~ 102 (226)
T d1ve3a1 38 RGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSR--ESNVEFIVGDARKLS----------FEDKT 102 (226)
T ss_dssp CCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCCEEEECCTTSCC----------SCTTC
T ss_pred CCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhccc--ccccccccccccccc----------ccCcC
Confidence 4568999998887 66788899999999999998888777766554 344566666766420 12225
Q ss_pred eEEEEEccC
Q 020854 133 VGVLINNVG 141 (320)
Q Consensus 133 id~lI~nAG 141 (320)
+|+|+.+..
T Consensus 103 fD~I~~~~~ 111 (226)
T d1ve3a1 103 FDYVIFIDS 111 (226)
T ss_dssp EEEEEEESC
T ss_pred ceEEEEecc
Confidence 788887754
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=92.55 E-value=0.4 Score=34.00 Aligned_cols=35 Identities=17% Similarity=0.121 Sum_probs=30.1
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP 87 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~ 87 (320)
..+.++|.|| |-||.++|..|++.|.+|.++.++.
T Consensus 21 ~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~ 55 (119)
T d3lada2 21 VPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD 55 (119)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence 3477888876 7899999999999999999998753
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=92.35 E-value=0.16 Score=40.84 Aligned_cols=47 Identities=19% Similarity=0.210 Sum_probs=40.0
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI 97 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l 97 (320)
+++|++++|-| .|..|..+|+.|.+.|++|+.++.+...++....+.
T Consensus 36 ~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~ 82 (230)
T d1leha1 36 SLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE 82 (230)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhc
Confidence 46699999987 588999999999999999999999988877665543
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.99 E-value=0.37 Score=34.48 Aligned_cols=34 Identities=21% Similarity=0.175 Sum_probs=29.7
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP 87 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~ 87 (320)
.|.++|.||+ -||.++|..|++.|.+|.++.|+.
T Consensus 22 pk~vvIvGgG-~iG~E~A~~l~~~G~~Vtlv~~~~ 55 (125)
T d3grsa2 22 PGRSVIVGAG-YIAVEMAGILSALGSKTSLMIRHD 55 (125)
T ss_dssp CSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCEEEEEcCC-ccHHHHHHHHhcCCcEEEEEeecc
Confidence 3778888875 699999999999999999999853
|
| >d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: CheY-like family: CheY-related domain: CheY protein species: Thermotoga maritima [TaxId: 2336]
Probab=91.98 E-value=0.85 Score=32.04 Aligned_cols=80 Identities=10% Similarity=0.121 Sum_probs=55.6
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCc-HHHHHHHHHHHcCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDL-DEGVERIKEAIEGL 131 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~ 131 (320)
||+|||.=-..-+...+...|.+.|++|+..+.+....-+ .+++. ...+..++.++.+.. -+.++++.+..+..
T Consensus 1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~al~---~~~~~--~~dliilD~~mp~~~G~e~~~~ir~~~~~~ 75 (118)
T d1u0sy_ 1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVE---KYKEL--KPDIVTMDITMPEMNGIDAIKEIMKIDPNA 75 (118)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHH---HHHHH--CCSEEEEECSCGGGCHHHHHHHHHHHCTTC
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHHHH---HHHhc--cCCEEEEecCCCCCCHHHHHHHHHHhCCCC
Confidence 7899999999999999999999999999877777654333 33333 345666666666532 45667777665554
Q ss_pred CeEEEEEc
Q 020854 132 DVGVLINN 139 (320)
Q Consensus 132 ~id~lI~n 139 (320)
+ +++..
T Consensus 76 p--vi~ls 81 (118)
T d1u0sy_ 76 K--IIVCS 81 (118)
T ss_dssp C--EEEEE
T ss_pred c--EEEEE
Confidence 5 55544
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=91.94 E-value=0.42 Score=34.08 Aligned_cols=35 Identities=23% Similarity=0.173 Sum_probs=29.6
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP 87 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~ 87 (320)
.+|.++|.|| |-+|.++|..|++.|.+|.++.+..
T Consensus 29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~ 63 (123)
T d1nhpa2 29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD 63 (123)
T ss_dssp TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence 3677777754 7999999999999999999998753
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=91.82 E-value=0.34 Score=34.34 Aligned_cols=34 Identities=12% Similarity=0.173 Sum_probs=29.2
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP 87 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~ 87 (320)
.|.++|.|| |-+|.++|..|++.|.+|.++.|..
T Consensus 22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~ 55 (117)
T d1onfa2 22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN 55 (117)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence 467777776 7899999999999999999999853
|
| >d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein PH1915, middle and C-terminal domains species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=91.74 E-value=0.53 Score=39.71 Aligned_cols=117 Identities=15% Similarity=0.190 Sum_probs=69.7
Q ss_pred CCCEEEEECCC-CcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 52 YGSWALVTGPT-DGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 52 ~gk~vlITGas-~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
.|++||=.|+. |+++.+. +..|+ +|+.++.+++.++...+.+...+-..++.++..|+. +....+.. .
T Consensus 145 ~g~~VLDl~~g~G~~si~~----a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~----~~~~~~~~--~ 214 (324)
T d2as0a2 145 PGDRVLDVFTYTGGFAIHA----AIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAF----EEMEKLQK--K 214 (324)
T ss_dssp TTCEEEETTCTTTHHHHHH----HHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH----HHHHHHHH--T
T ss_pred CCCeeecccCcccchhhhh----hhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhh----hhhHHHHh--c
Confidence 37888877765 5555544 45676 799999999999888888776554456677666543 22222222 2
Q ss_pred CCCeEEEEEccCCCCCccccccCCCHHHHHHHHHHHhHHHHHHHHHHhHhhhcCCCcEEEEEc
Q 020854 130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIG 192 (320)
Q Consensus 130 ~~~id~lI~nAG~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~g~Iv~vs 192 (320)
...+|+||.+....... ...... -......+.+.+++.+ +++|.++..|
T Consensus 215 ~~~fD~Vi~DpP~~~~~--------~~~~~~----~~~~y~~l~~~a~~ll--~pGG~lv~~s 263 (324)
T d2as0a2 215 GEKFDIVVLDPPAFVQH--------EKDLKA----GLRAYFNVNFAGLNLV--KDGGILVTCS 263 (324)
T ss_dssp TCCEEEEEECCCCSCSS--------GGGHHH----HHHHHHHHHHHHHTTE--EEEEEEEEEE
T ss_pred cCCCCchhcCCccccCC--------HHHHHH----HHHHHHHHHHHHHHHc--CCCcEEEEEe
Confidence 23588999987654431 111111 1223444666666665 3456666654
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=91.66 E-value=0.45 Score=33.48 Aligned_cols=33 Identities=18% Similarity=0.099 Sum_probs=28.4
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP 87 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~ 87 (320)
|.++|.|| |-+|.++|..|++.|.+|.++.|.+
T Consensus 22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~ 54 (116)
T d1gesa2 22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD 54 (116)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence 56777665 7899999999999999999999854
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=91.52 E-value=0.5 Score=33.14 Aligned_cols=33 Identities=21% Similarity=0.281 Sum_probs=28.2
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN 86 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~ 86 (320)
.|.++|.| +|-+|.++|..|++.|.+|.++.+.
T Consensus 21 p~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~ 53 (115)
T d1lvla2 21 PQHLVVVG-GGYIGLELGIAYRKLGAQVSVVEAR 53 (115)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CCeEEEEC-CCHHHHHHHHHHhhcccceEEEeee
Confidence 46677775 4899999999999999999999875
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=91.48 E-value=0.17 Score=40.43 Aligned_cols=35 Identities=23% Similarity=0.252 Sum_probs=29.9
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCC
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN 86 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~ 86 (320)
-.+|.|+|.||+ --|.+.|.+|+++|++|+++.++
T Consensus 47 ~~~k~VvIIGaG-pAGl~aA~~l~~~G~~v~l~E~~ 81 (233)
T d1djqa3 47 KNKDSVLIVGAG-PSGSEAARVLMESGYTVHLTDTA 81 (233)
T ss_dssp SSCCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSS
T ss_pred cCCceEEEEccc-HHHHHHHHHHHHhccceeeEeec
Confidence 467999999874 55889999999999999999874
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=91.45 E-value=0.37 Score=34.29 Aligned_cols=34 Identities=29% Similarity=0.392 Sum_probs=29.0
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP 87 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~ 87 (320)
++.++|.|| |-+|.++|..|++.|.+|.++.|++
T Consensus 32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~ 65 (122)
T d1xhca2 32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA 65 (122)
T ss_dssp HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence 466777665 7999999999999999999999864
|
| >d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein PH1948 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=91.42 E-value=1.2 Score=34.57 Aligned_cols=74 Identities=16% Similarity=0.161 Sum_probs=51.8
Q ss_pred cCCCEEEEECCCCc-HHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDG-IGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~G-IG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
+.|++||=-|+++| +|. +++.+|+ +|+.++.++..++...+.+... +.....+..|..+.
T Consensus 45 l~g~~vLDlg~GtG~l~i----~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~--~~~~~~~~~d~~~~------------ 106 (201)
T d1wy7a1 45 IEGKVVADLGAGTGVLSY----GALLLGAKEVICVEVDKEAVDVLIENLGEF--KGKFKVFIGDVSEF------------ 106 (201)
T ss_dssp STTCEEEEETCTTCHHHH----HHHHTTCSEEEEEESCHHHHHHHHHHTGGG--TTSEEEEESCGGGC------------
T ss_pred CCCCEEEECcCcchHHHH----HHHHcCCCEEEEEcCcHHHHHHHHHHHHHc--CCCceEEECchhhh------------
Confidence 45999998887766 443 4456786 8999999999888777766543 44566676665432
Q ss_pred cCCCeEEEEEccCCC
Q 020854 129 EGLDVGVLINNVGIS 143 (320)
Q Consensus 129 ~~~~id~lI~nAG~~ 143 (320)
. .++|+||.|....
T Consensus 107 ~-~~fD~Vi~nPP~~ 120 (201)
T d1wy7a1 107 N-SRVDIVIMNPPFG 120 (201)
T ss_dssp C-CCCSEEEECCCCS
T ss_pred C-CcCcEEEEcCccc
Confidence 1 2577999998654
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.37 E-value=0.56 Score=33.33 Aligned_cols=34 Identities=18% Similarity=0.228 Sum_probs=29.4
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP 87 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~ 87 (320)
.|.++|.|| |-||.++|..|++.|.+|.++.++.
T Consensus 23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~ 56 (122)
T d1v59a2 23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP 56 (122)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence 367888876 7899999999999999999998754
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=91.35 E-value=0.48 Score=33.71 Aligned_cols=32 Identities=28% Similarity=0.302 Sum_probs=27.9
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCC
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN 86 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~ 86 (320)
+.++|.|| |-||.++|..|.+.|.+|.++.|+
T Consensus 21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~ 52 (122)
T d1h6va2 21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS 52 (122)
T ss_dssp CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence 55777765 789999999999999999999886
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=91.34 E-value=1 Score=33.95 Aligned_cols=78 Identities=17% Similarity=0.223 Sum_probs=53.2
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
...-.|+|.|+ |=-|++-++.....|++|.+.|.+.+++++....... .+... .+++ +.+.+.+..
T Consensus 30 v~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~-----~~~~~---~~~~-----~~l~~~~~~ 95 (168)
T d1pjca1 30 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS-----RVELL---YSNS-----AEIETAVAE 95 (168)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG-----GSEEE---ECCH-----HHHHHHHHT
T ss_pred CCCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcc-----cceee---hhhh-----hhHHHhhcc
Confidence 34577888887 5678888888889999999999999998876554422 22221 2222 344555665
Q ss_pred CCeEEEEEccCCCC
Q 020854 131 LDVGVLINNVGISY 144 (320)
Q Consensus 131 ~~id~lI~nAG~~~ 144 (320)
.| +||..+=+..
T Consensus 96 aD--ivI~aalipG 107 (168)
T d1pjca1 96 AD--LLIGAVLVPG 107 (168)
T ss_dssp CS--EEEECCCCTT
T ss_pred Cc--EEEEeeecCC
Confidence 56 8998887654
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=91.27 E-value=0.068 Score=38.80 Aligned_cols=52 Identities=13% Similarity=0.069 Sum_probs=38.5
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCC
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~ 116 (320)
|+++|.|. |.+|..++++|. |.+|++++.+++..+... . ..+.++..|.++.
T Consensus 1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~----~----~~~~~i~Gd~~~~ 52 (129)
T d2fy8a1 1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVL----R----SGANFVHGDPTRV 52 (129)
T ss_dssp CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHH----H----TTCEEEESCTTSH
T ss_pred CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHH----h----cCccccccccCCH
Confidence 56888875 789999999994 667888999888765432 2 2356777888765
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=91.25 E-value=0.17 Score=38.77 Aligned_cols=44 Identities=14% Similarity=-0.017 Sum_probs=37.6
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQ 98 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~ 98 (320)
.|..||..|++.| ..+..|+++|++|+.++.+++.++...+..+
T Consensus 20 ~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~ 63 (201)
T d1pjza_ 20 PGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERG 63 (201)
T ss_dssp TTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHC
T ss_pred CCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhc
Confidence 4789999999888 4777999999999999999998887766654
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=91.18 E-value=0.15 Score=39.98 Aligned_cols=37 Identities=16% Similarity=0.115 Sum_probs=31.6
Q ss_pred EEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Q 020854 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV 93 (320)
Q Consensus 56 vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~ 93 (320)
+.|. |.|-+|..+|..|++.|++|+..|.|+++.+++
T Consensus 3 I~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~l 39 (202)
T d1mv8a2 3 ISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLI 39 (202)
T ss_dssp EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred EEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHh
Confidence 4444 789999999999999999999999998876654
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=91.03 E-value=0.49 Score=35.21 Aligned_cols=45 Identities=22% Similarity=0.271 Sum_probs=33.9
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHc--CCeEEEEe--CCHHHHHHHHHHH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKT--GLNLVLVG--RNPDKLKDVSDSI 97 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~--G~~Vil~~--r~~~~~~~~~~~l 97 (320)
.|.+.|-|+||.||.+...-+.+. .++|+.++ +|.+.+.+.+.++
T Consensus 2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef 50 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRT 50 (150)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHT
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhh
Confidence 478999999999999999988765 46777644 5666666555544
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=90.98 E-value=0.15 Score=38.01 Aligned_cols=35 Identities=23% Similarity=0.271 Sum_probs=28.8
Q ss_pred CCEEEE-ECCCCcHHHHHHHHHHHcCCeEEEEeCCH
Q 020854 53 GSWALV-TGPTDGIGKSFAFQLAKTGLNLVLVGRNP 87 (320)
Q Consensus 53 gk~vlI-TGas~GIG~ala~~l~~~G~~Vil~~r~~ 87 (320)
++.++| -.|++-||.++|..|+++|++|.++.+..
T Consensus 39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~ 74 (156)
T d1djqa2 39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 74 (156)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence 344444 45678999999999999999999998864
|
| >d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 1, PRMT1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=90.78 E-value=0.51 Score=39.56 Aligned_cols=76 Identities=13% Similarity=0.092 Sum_probs=51.6
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
.+||+||-.|++.|+ ++..+++.|+ +|+.++.++. .....+.....+-..++..+..|..+-. ++
T Consensus 32 ~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~~----------~~ 97 (316)
T d1oria_ 32 FKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEVE----------LP 97 (316)
T ss_dssp HTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTCC----------CS
T ss_pred CCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHcc----------cc
Confidence 469999999999885 5566778886 6888997753 4444444444444556888888877631 12
Q ss_pred CCCeEEEEEcc
Q 020854 130 GLDVGVLINNV 140 (320)
Q Consensus 130 ~~~id~lI~nA 140 (320)
...+|+++..-
T Consensus 98 ~~~~D~ivs~~ 108 (316)
T d1oria_ 98 VEKVDIIISEW 108 (316)
T ss_dssp SSCEEEEEECC
T ss_pred cceeEEEeeee
Confidence 23578888764
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.74 E-value=0.064 Score=48.99 Aligned_cols=59 Identities=10% Similarity=0.147 Sum_probs=44.4
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCC-------------------HHHHHHHHHHHHhhcCCceEEEE
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRN-------------------PDKLKDVSDSIQAKYAKTQIKSV 109 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~ 109 (320)
++.+..|+|.|+ ||+|.++++.|+..|. +++++|.+ ..+.+.+++.+.+.+|...+..+
T Consensus 22 ~L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i~~~ 100 (529)
T d1yova1 22 ALESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFV 100 (529)
T ss_dssp HHHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBCCEE
T ss_pred HHhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcEEEE
Confidence 355788999986 7999999999999996 78888753 13456667778777766655443
|
| >d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Putative methyltransferase CAC2371 species: Clostridium acetobutylicum [TaxId: 1488]
Probab=90.73 E-value=0.75 Score=36.63 Aligned_cols=75 Identities=12% Similarity=0.014 Sum_probs=55.0
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
..++.||=.|++.|. ++..|+++|.+|+.++.+++.++.+.+..... +.++.++..|+.+- .+.
T Consensus 36 ~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~--~~~v~~~~~d~~~~----------~~~- 99 (246)
T d1y8ca_ 36 LVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQ--GLKPRLACQDISNL----------NIN- 99 (246)
T ss_dssp CCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHT--TCCCEEECCCGGGC----------CCS-
T ss_pred CCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhcccccccc--Cccceeeccchhhh----------ccc-
Confidence 446889999999885 78889999999999999999888776666554 34567777776542 012
Q ss_pred CCeEEEEEccC
Q 020854 131 LDVGVLINNVG 141 (320)
Q Consensus 131 ~~id~lI~nAG 141 (320)
.++|+++...+
T Consensus 100 ~~fD~i~~~~~ 110 (246)
T d1y8ca_ 100 RKFDLITCCLD 110 (246)
T ss_dssp CCEEEEEECTT
T ss_pred ccccccceeee
Confidence 25888886544
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=90.59 E-value=0.15 Score=40.75 Aligned_cols=32 Identities=31% Similarity=0.472 Sum_probs=27.9
Q ss_pred CEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCC
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN 86 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~G~~Vil~~r~ 86 (320)
|.|+|.|| |-.|.++|.+|+++|++|++++|+
T Consensus 7 ~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~ 38 (268)
T d1c0pa1 7 KRVVVLGS-GVIGLSSALILARKGYSVHILARD 38 (268)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCC
Confidence 45778776 678999999999999999999985
|
| >d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein TTHA1280, middle and C-terminal domains species: Thermus thermophilus [TaxId: 274]
Probab=90.54 E-value=1.1 Score=37.64 Aligned_cols=83 Identities=13% Similarity=0.115 Sum_probs=53.7
Q ss_pred cCCCEEEEECCC-CcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 51 KYGSWALVTGPT-DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 51 ~~gk~vlITGas-~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
.+|+.||=.++. ||++.+ ++..|.+|+.++.++..++...+.+...+- ..+.++..|.. +..+.+...
T Consensus 144 ~~g~rVLDl~~gtG~~s~~----~a~g~~~V~~vD~s~~al~~a~~n~~~ngl-~~~~~i~~d~~----~~~~~~~~~-- 212 (318)
T d1wxxa2 144 FRGERALDVFSYAGGFALH----LALGFREVVAVDSSAEALRRAEENARLNGL-GNVRVLEANAF----DLLRRLEKE-- 212 (318)
T ss_dssp CCEEEEEEETCTTTHHHHH----HHHHEEEEEEEESCHHHHHHHHHHHHHTTC-TTEEEEESCHH----HHHHHHHHT--
T ss_pred hCCCeeeccCCCCcHHHHH----HHhcCCcEEeecchHHHHHHHHHHHHHcCC-CCcceeeccHH----HHhhhhHhh--
Confidence 358888877665 455443 344567999999999999988888766542 34666666643 222333322
Q ss_pred CCCeEEEEEccCCCC
Q 020854 130 GLDVGVLINNVGISY 144 (320)
Q Consensus 130 ~~~id~lI~nAG~~~ 144 (320)
...+|+||.+.....
T Consensus 213 ~~~fD~Vi~DpP~~~ 227 (318)
T d1wxxa2 213 GERFDLVVLDPPAFA 227 (318)
T ss_dssp TCCEEEEEECCCCSC
T ss_pred hcCCCEEEEcCCccc
Confidence 235889999976543
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=90.45 E-value=0.44 Score=34.19 Aligned_cols=33 Identities=21% Similarity=0.150 Sum_probs=29.4
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN 86 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~ 86 (320)
.+.++|.|| |-||.++|..|.+.|.+|.++.+.
T Consensus 26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~ 58 (125)
T d1ojta2 26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMM 58 (125)
T ss_dssp CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEee
Confidence 578888886 799999999999999999999874
|
| >d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein MJ0882 domain: Hypothetical protein MJ0882 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=90.30 E-value=1.1 Score=34.37 Aligned_cols=77 Identities=18% Similarity=0.152 Sum_probs=53.8
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcC-CceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYA-KTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.+++||=.|+.+| .++..+++.+.+|+.++.++...+...+.+...+- +..+..+..|..+.. ..
T Consensus 52 ~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~~-----------~~ 117 (194)
T d1dusa_ 52 KDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV-----------KD 117 (194)
T ss_dssp TTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC-----------TT
T ss_pred CCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhhh-----------cc
Confidence 4788888888766 34456677788999999999888877766654332 346788888876531 12
Q ss_pred CCeEEEEEccCC
Q 020854 131 LDVGVLINNVGI 142 (320)
Q Consensus 131 ~~id~lI~nAG~ 142 (320)
..+|+++.|...
T Consensus 118 ~~fD~Ii~~~p~ 129 (194)
T d1dusa_ 118 RKYNKIITNPPI 129 (194)
T ss_dssp SCEEEEEECCCS
T ss_pred CCceEEEEcccE
Confidence 258899988543
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=90.11 E-value=0.15 Score=41.52 Aligned_cols=34 Identities=24% Similarity=0.316 Sum_probs=28.3
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP 87 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~ 87 (320)
||.|+|.|| |--|.+.|.+|+++|++|+++.++.
T Consensus 1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~ 34 (373)
T d1seza1 1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG 34 (373)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 578888876 5567888999999999999998753
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=90.11 E-value=0.43 Score=33.99 Aligned_cols=34 Identities=18% Similarity=0.181 Sum_probs=29.9
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP 87 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~ 87 (320)
.|.++|.|| |-||.++|..|++.|.+|.++.|++
T Consensus 25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~ 58 (123)
T d1dxla2 25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFAS 58 (123)
T ss_dssp CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcc
Confidence 477888876 7899999999999999999998854
|
| >d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ribosomal protein L11 methyltransferase PrmA domain: PrmA-like protein TTHA0656 (TT0836) species: Thermus thermophilus [TaxId: 274]
Probab=90.06 E-value=1.1 Score=36.30 Aligned_cols=73 Identities=18% Similarity=0.173 Sum_probs=50.5
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
..|++||=.|+++|+ ++..+++.|++|+.++.++..++.+.+..+..+ ....++..|.. +.+..
T Consensus 119 ~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n~--~~~~~~~~d~~-----------~~~~~ 182 (254)
T d2nxca1 119 RPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNG--VRPRFLEGSLE-----------AALPF 182 (254)
T ss_dssp CTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTT--CCCEEEESCHH-----------HHGGG
T ss_pred CccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHcC--CceeEEecccc-----------ccccc
Confidence 358899999999886 334567789999999999999888777766543 33444444421 12233
Q ss_pred CCeEEEEEc
Q 020854 131 LDVGVLINN 139 (320)
Q Consensus 131 ~~id~lI~n 139 (320)
.++|+++.|
T Consensus 183 ~~fD~V~an 191 (254)
T d2nxca1 183 GPFDLLVAN 191 (254)
T ss_dssp CCEEEEEEE
T ss_pred cccchhhhc
Confidence 367899877
|
| >d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=89.93 E-value=1 Score=35.31 Aligned_cols=80 Identities=15% Similarity=0.020 Sum_probs=54.5
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|.+||-.|+.+|--.+...++...+.+|+.++.+++.++...+.+...+ -..+.....|..+.. ....
T Consensus 75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~-~~n~~~~~~d~~~~~----------~~~~ 143 (213)
T d1dl5a1 75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLG-IENVIFVCGDGYYGV----------PEFS 143 (213)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTT-CCSEEEEESCGGGCC----------GGGC
T ss_pred ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhc-ccccccccCchHHcc----------cccc
Confidence 47789999988877666655555555689999999998888887776543 344556666654321 1122
Q ss_pred CeEEEEEccCC
Q 020854 132 DVGVLINNVGI 142 (320)
Q Consensus 132 ~id~lI~nAG~ 142 (320)
.+|.++.+++.
T Consensus 144 ~fD~I~~~~~~ 154 (213)
T d1dl5a1 144 PYDVIFVTVGV 154 (213)
T ss_dssp CEEEEEECSBB
T ss_pred chhhhhhhccH
Confidence 47899888764
|
| >d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Putative methyltransferase Atu0340 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=89.91 E-value=2.6 Score=35.03 Aligned_cols=82 Identities=9% Similarity=-0.054 Sum_probs=51.8
Q ss_pred CCCEEEEECCC-CcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCC-ceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 52 YGSWALVTGPT-DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAK-TQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 52 ~gk~vlITGas-~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
+|+.||=..+. |+++.+ +++.|++|+.++.+...++...+.+...+-. ..+.++..|+. +.+++....-.
T Consensus 132 ~~~rVLdlf~~tG~~sl~----aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~----~~l~~~~~~~~ 203 (309)
T d2igta1 132 RPLKVLNLFGYTGVASLV----AAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM----KFIQREERRGS 203 (309)
T ss_dssp SCCEEEEETCTTCHHHHH----HHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH----HHHHHHHHHTC
T ss_pred CCCeEEEecCCCcHHHHH----HHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHH----HhHHHHhhcCC
Confidence 46777766555 444443 4567999999999999988887776554322 35667665543 33333333323
Q ss_pred CCCeEEEEEccCCC
Q 020854 130 GLDVGVLINNVGIS 143 (320)
Q Consensus 130 ~~~id~lI~nAG~~ 143 (320)
.+|+||.+.-..
T Consensus 204 --~fD~IilDPP~f 215 (309)
T d2igta1 204 --TYDIILTDPPKF 215 (309)
T ss_dssp --CBSEEEECCCSE
T ss_pred --CCCEEEECCCcc
Confidence 466999886543
|
| >d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=89.42 E-value=1.1 Score=35.32 Aligned_cols=79 Identities=14% Similarity=0.167 Sum_probs=58.0
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|..||..|+.+|--.++.-+++ |.+|+.+.++++-.+...+.+.+.+ -.++.+...|..+.. ....
T Consensus 78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g-~~nv~~~~gd~~~g~----------~~~~ 144 (215)
T d1jg1a_ 78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAG-VKNVHVILGDGSKGF----------PPKA 144 (215)
T ss_dssp TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTT-CCSEEEEESCGGGCC----------GGGC
T ss_pred ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcC-CceeEEEECccccCC----------cccC
Confidence 36789999999999988888887 5679999999887777766666543 456788888876421 1123
Q ss_pred CeEEEEEccCCC
Q 020854 132 DVGVLINNVGIS 143 (320)
Q Consensus 132 ~id~lI~nAG~~ 143 (320)
++|.++.+++..
T Consensus 145 pfD~Iiv~~a~~ 156 (215)
T d1jg1a_ 145 PYDVIIVTAGAP 156 (215)
T ss_dssp CEEEEEECSBBS
T ss_pred cceeEEeecccc
Confidence 578998887753
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=89.41 E-value=0.21 Score=37.16 Aligned_cols=36 Identities=11% Similarity=0.053 Sum_probs=29.0
Q ss_pred EEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Q 020854 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD 92 (320)
Q Consensus 56 vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~ 92 (320)
+-|. |.|-+|.++|+.|.++|++|+..+++.++...
T Consensus 3 IgiI-G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~ 38 (152)
T d1i36a2 3 VGFI-GFGEVAQTLASRLRSRGVEVVTSLEGRSPSTI 38 (152)
T ss_dssp EEEE-SCSHHHHHHHHHHHHTTCEEEECCTTCCHHHH
T ss_pred EEEE-cHHHHHHHHHHHHHHCCCeEEEEcCchhHHHH
Confidence 3444 56999999999999999999998887665443
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=89.34 E-value=0.17 Score=41.14 Aligned_cols=31 Identities=35% Similarity=0.433 Sum_probs=27.2
Q ss_pred EEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH
Q 020854 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP 87 (320)
Q Consensus 56 vlITGas~GIG~ala~~l~~~G~~Vil~~r~~ 87 (320)
|+|.|| |-.|.++|.+|+++|.+|++++++.
T Consensus 7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~ 37 (276)
T d1ryia1 7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT 37 (276)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 667765 7899999999999999999999864
|
| >d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=89.12 E-value=1 Score=33.98 Aligned_cols=34 Identities=15% Similarity=-0.024 Sum_probs=23.5
Q ss_pred EEEEC-CCCcHHHHHHHHHHHcC----CeEEEEeCCHHH
Q 020854 56 ALVTG-PTDGIGKSFAFQLAKTG----LNLVLVGRNPDK 89 (320)
Q Consensus 56 vlITG-as~GIG~ala~~l~~~G----~~Vil~~r~~~~ 89 (320)
+.|.| ||.|.+.+++.-+.... .++++.|.++++
T Consensus 4 I~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~ 42 (169)
T d1s6ya1 4 IATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGK 42 (169)
T ss_dssp EEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGH
T ss_pred EEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccH
Confidence 45555 56778877777666532 389999998754
|
| >d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Arginine methyltransferase, HMT1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=89.04 E-value=0.91 Score=38.09 Aligned_cols=76 Identities=14% Similarity=0.127 Sum_probs=52.5
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
.+|++||-.|++.|+ ++..+++.|+ +|+.++.++ .++...+..+..+...++..+..|+.+- .++
T Consensus 37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l----------~~~ 102 (328)
T d1g6q1_ 37 FKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDV----------HLP 102 (328)
T ss_dssp HTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTS----------CCS
T ss_pred CCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhc----------cCc
Confidence 458999999999884 4556678887 688888775 4444455555555566788888887753 122
Q ss_pred CCCeEEEEEcc
Q 020854 130 GLDVGVLINNV 140 (320)
Q Consensus 130 ~~~id~lI~nA 140 (320)
...+|+++..-
T Consensus 103 ~~~~D~i~se~ 113 (328)
T d1g6q1_ 103 FPKVDIIISEW 113 (328)
T ss_dssp SSCEEEEEECC
T ss_pred ccceeEEEEEe
Confidence 33578888754
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=89.03 E-value=0.19 Score=38.49 Aligned_cols=34 Identities=18% Similarity=0.220 Sum_probs=28.6
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP 87 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~ 87 (320)
+|.|+|.|| |-.|.+.|..|+++|+ .|++..|+.
T Consensus 4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~ 38 (196)
T d1gtea4 4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQE 38 (196)
T ss_dssp GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecC
Confidence 577888876 6789999999999998 498988853
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=88.74 E-value=0.54 Score=35.37 Aligned_cols=42 Identities=17% Similarity=0.271 Sum_probs=37.2
Q ss_pred cccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHH
Q 020854 47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK 89 (320)
Q Consensus 47 ~~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~ 89 (320)
.++-+.||+++|.| -|-+|+.+|+.+...|++|+++..|+-+
T Consensus 17 t~~~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~ 58 (163)
T d1v8ba1 17 TDFLISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPIC 58 (163)
T ss_dssp HCCCCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred hCceecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchh
Confidence 45668899999987 5779999999999999999999999855
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=88.73 E-value=0.29 Score=34.63 Aligned_cols=35 Identities=23% Similarity=0.279 Sum_probs=30.3
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP 87 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~ 87 (320)
.+|.++|.|| |-+|.++|..|++.|.+|.++.|.+
T Consensus 21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~ 55 (121)
T d1mo9a2 21 PGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTE 55 (121)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccc
Confidence 3688888775 7899999999999999999999864
|
| >d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein Ta0852 species: Thermoplasma acidophilum [TaxId: 2303]
Probab=88.68 E-value=1.4 Score=35.56 Aligned_cols=77 Identities=19% Similarity=0.282 Sum_probs=57.2
Q ss_pred CCCEEEEECCCCc-HHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDG-IGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~G-IG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|.+||=.|+.+| +...+|+.+... .+|+.++++++.++.+.+.+.+.+....+.....|+.+.. ..
T Consensus 85 pG~rVLEiG~GsG~lt~~la~~v~~~-g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~~~-----------~~ 152 (250)
T d1yb2a1 85 PGMDILEVGVGSGNMSSYILYALNGK-GTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFI-----------SD 152 (250)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHTTS-SEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCC-----------CS
T ss_pred CcCEEEEeeeeCcHHHHHHHHHhCCC-cEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeeeccc-----------cc
Confidence 4788999998765 567777776544 4899999999999988888877555567888888877531 23
Q ss_pred CCeEEEEEcc
Q 020854 131 LDVGVLINNV 140 (320)
Q Consensus 131 ~~id~lI~nA 140 (320)
..+|.++.+.
T Consensus 153 ~~fD~V~ld~ 162 (250)
T d1yb2a1 153 QMYDAVIADI 162 (250)
T ss_dssp CCEEEEEECC
T ss_pred ceeeeeeecC
Confidence 3588988764
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=88.48 E-value=0.25 Score=38.07 Aligned_cols=36 Identities=22% Similarity=0.255 Sum_probs=31.2
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP 87 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~ 87 (320)
.++|.|+|.|| |--|.+.|..|+++|++|++..++.
T Consensus 41 ~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~ 76 (179)
T d1ps9a3 41 VQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS 76 (179)
T ss_dssp SSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence 45788999986 6778999999999999999999853
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=88.37 E-value=2.1 Score=32.11 Aligned_cols=77 Identities=16% Similarity=0.171 Sum_probs=42.5
Q ss_pred EEEEECCCCcHH--HHHHHHHHHc----CCeEEEEeCCHHHHHHHHHHHHhhc--CCceEEEEEEeCCCCcHHHHHHHHH
Q 020854 55 WALVTGPTDGIG--KSFAFQLAKT----GLNLVLVGRNPDKLKDVSDSIQAKY--AKTQIKSVVVDFSGDLDEGVERIKE 126 (320)
Q Consensus 55 ~vlITGas~GIG--~ala~~l~~~----G~~Vil~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~ 126 (320)
.+.|.|| |..| .++...++.. +.+++++|.|+++++.....+.... .+........ ++ ..+
T Consensus 4 KI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~---td-------~~e 72 (171)
T d1obba1 4 KIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT---MN-------LDD 72 (171)
T ss_dssp EEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE---SC-------HHH
T ss_pred EEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe---CC-------hhh
Confidence 4666675 4444 4555556543 3589999999998876555544311 0122222111 11 233
Q ss_pred HHcCCCeEEEEEccCCCC
Q 020854 127 AIEGLDVGVLINNVGISY 144 (320)
Q Consensus 127 ~~~~~~id~lI~nAG~~~ 144 (320)
.+...| ++|+.++...
T Consensus 73 aL~dad--~Vv~~~~~g~ 88 (171)
T d1obba1 73 VIIDAD--FVINTAMVGG 88 (171)
T ss_dssp HHTTCS--EEEECCCTTH
T ss_pred cccCCC--eEeeeccccc
Confidence 344445 9999988653
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=88.35 E-value=3.7 Score=30.37 Aligned_cols=75 Identities=17% Similarity=0.078 Sum_probs=39.1
Q ss_pred EEEECCCCcHHHHHHHH--HHHc----CCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 56 ALVTGPTDGIGKSFAFQ--LAKT----GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 56 vlITGas~GIG~ala~~--l~~~----G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
+.|.||++ .|...+-. +... +.++++.|.|+++++...+...... ..... ...+.+ ..+.+.
T Consensus 3 IaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~-~~~~~---~~~t~~-------~~~~l~ 70 (162)
T d1up7a1 3 IAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLV-KDRFK---VLISDT-------FEGAVV 70 (162)
T ss_dssp EEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHH-TTSSE---EEECSS-------HHHHHT
T ss_pred EEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhh-ccCce---EEEecC-------cccccC
Confidence 66777643 44444422 2211 3589999999998775433332211 11111 122322 123344
Q ss_pred CCCeEEEEEccCCCC
Q 020854 130 GLDVGVLINNVGISY 144 (320)
Q Consensus 130 ~~~id~lI~nAG~~~ 144 (320)
..| ++|..||...
T Consensus 71 ~aD--vVVita~~~~ 83 (162)
T d1up7a1 71 DAK--YVIFQFRPGG 83 (162)
T ss_dssp TCS--EEEECCCTTH
T ss_pred CCC--EEEEecccCC
Confidence 445 9999998753
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=88.28 E-value=0.32 Score=35.29 Aligned_cols=35 Identities=20% Similarity=0.233 Sum_probs=29.9
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP 87 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~ 87 (320)
.+|.++|.|| |-+|.++|..|++.|.+|.++.+..
T Consensus 34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~ 68 (133)
T d1q1ra2 34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAA 68 (133)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeecc
Confidence 3677888865 8999999999999999999998853
|
| >d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein Ta1320 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=88.01 E-value=0.76 Score=35.76 Aligned_cols=70 Identities=19% Similarity=0.181 Sum_probs=48.4
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHc
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE 129 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 129 (320)
+.||+||=.|+++|+ ++..++..|+ +|+.++.+++.++...+.+ ..+.++..|+.+- +
T Consensus 47 l~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N~------~~~~~~~~D~~~l------------~ 105 (197)
T d1ne2a_ 47 IGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRNC------GGVNFMVADVSEI------------S 105 (197)
T ss_dssp SBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHHC------TTSEEEECCGGGC------------C
T ss_pred CCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHcc------ccccEEEEehhhc------------C
Confidence 559999999998883 3345677786 6999999988766443322 2356677776532 2
Q ss_pred CCCeEEEEEccCC
Q 020854 130 GLDVGVLINNVGI 142 (320)
Q Consensus 130 ~~~id~lI~nAG~ 142 (320)
.++|+||.|...
T Consensus 106 -~~fD~Vi~NPPf 117 (197)
T d1ne2a_ 106 -GKYDTWIMNPPF 117 (197)
T ss_dssp -CCEEEEEECCCC
T ss_pred -CcceEEEeCccc
Confidence 258899999654
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=87.73 E-value=1.2 Score=31.08 Aligned_cols=34 Identities=21% Similarity=0.081 Sum_probs=26.6
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHc---CCeEEEEeCCH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKT---GLNLVLVGRNP 87 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~---G~~Vil~~r~~ 87 (320)
.+.++|.|| |.+|.++|..|.+. |.+|.++.|.+
T Consensus 20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~ 56 (117)
T d1aoga2 20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE 56 (117)
T ss_dssp CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence 478888888 89999999776654 45799988743
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=87.68 E-value=0.98 Score=33.48 Aligned_cols=44 Identities=18% Similarity=0.228 Sum_probs=33.8
Q ss_pred CEEEEECCCCcHHHHHHHHHHHc--CCeEEEE--eCCHHHHHHHHHHH
Q 020854 54 SWALVTGPTDGIGKSFAFQLAKT--GLNLVLV--GRNPDKLKDVSDSI 97 (320)
Q Consensus 54 k~vlITGas~GIG~ala~~l~~~--G~~Vil~--~r~~~~~~~~~~~l 97 (320)
|.+.|-|+||.||.+...-+.+. .++|+.+ .+|.+.+.+.+.++
T Consensus 2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f 49 (151)
T d1q0qa2 2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEF 49 (151)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHH
T ss_pred CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHH
Confidence 57899999999999999988876 3677654 46677776666655
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=87.64 E-value=1.6 Score=36.09 Aligned_cols=34 Identities=24% Similarity=0.112 Sum_probs=30.5
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEe
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG 84 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~ 84 (320)
+++||+|+|-|- |-+|..+|+.|.+.|++|+.++
T Consensus 33 ~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs 66 (293)
T d1hwxa1 33 GFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG 66 (293)
T ss_dssp SSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence 467999999986 7999999999999999998776
|
| >d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein BH2331 species: Bacillus halodurans [TaxId: 86665]
Probab=87.60 E-value=1.9 Score=33.51 Aligned_cols=76 Identities=16% Similarity=0.039 Sum_probs=53.3
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
++.||=.|++.|.- +..++++|++|+.++-+++-++...+.+...+ ..++.+...|..+- .+....
T Consensus 16 ~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~-~~~i~~~~~d~~~l----------~~~~~~ 81 (231)
T d1vl5a_ 16 NEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNG-HQQVEYVQGDAEQM----------PFTDER 81 (231)
T ss_dssp CCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTT-CCSEEEEECCC-CC----------CSCTTC
T ss_pred cCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhcccccc-cccccccccccccc----------cccccc
Confidence 57899999988854 45678889999999999988877665555443 45677777777652 012225
Q ss_pred eEEEEEccCC
Q 020854 133 VGVLINNVGI 142 (320)
Q Consensus 133 id~lI~nAG~ 142 (320)
+|+++.+...
T Consensus 82 fD~v~~~~~l 91 (231)
T d1vl5a_ 82 FHIVTCRIAA 91 (231)
T ss_dssp EEEEEEESCG
T ss_pred cccccccccc
Confidence 7888877654
|
| >d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical methyltransferase PH1305 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=87.56 E-value=0.78 Score=36.45 Aligned_cols=73 Identities=12% Similarity=0.085 Sum_probs=53.7
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.++++|=.|++.| .++..|+++|++|+.++-+++-++.+.+..... +.++.++..|+.+- . ++.
T Consensus 41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~--~~~i~~~~~d~~~l--~--------~~~- 104 (251)
T d1wzna1 41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKER--NLKIEFLQGDVLEI--A--------FKN- 104 (251)
T ss_dssp CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCCEEEESCGGGC--C--------CCS-
T ss_pred CCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccc--cccchheehhhhhc--c--------ccc-
Confidence 4678999999887 456678899999999999998888777776654 34677888887652 0 122
Q ss_pred CeEEEEEcc
Q 020854 132 DVGVLINNV 140 (320)
Q Consensus 132 ~id~lI~nA 140 (320)
.+|.++..-
T Consensus 105 ~fD~I~~~~ 113 (251)
T d1wzna1 105 EFDAVTMFF 113 (251)
T ss_dssp CEEEEEECS
T ss_pred ccchHhhhh
Confidence 577877653
|
| >d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Methyltransferase TTHA0928 species: Thermus thermophilus [TaxId: 274]
Probab=87.10 E-value=1.1 Score=33.88 Aligned_cols=78 Identities=15% Similarity=0.181 Sum_probs=46.2
Q ss_pred CCCEEEEECCC-CcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPT-DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas-~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
+|+.||=.|+. |++| -+.+.+|++|+.++.|+..++.+.+.++..+-+.++...++ +.+..... ...
T Consensus 41 ~g~~vLDl~~G~G~~~----i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~-------d~~~~~~~-~~~ 108 (171)
T d1ws6a1 41 RRGRFLDPFAGSGAVG----LEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPV-------EVFLPEAK-AQG 108 (171)
T ss_dssp TCCEEEEETCSSCHHH----HHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCH-------HHHHHHHH-HTT
T ss_pred CCCeEEEeccccchhh----hhhhhccchhhhcccCHHHHhhhhHHHHhhccccceeeeeh-------hccccccc-ccC
Confidence 35666655544 5545 35667899999999999998888777766543333332221 11111111 222
Q ss_pred CCeEEEEEccC
Q 020854 131 LDVGVLINNVG 141 (320)
Q Consensus 131 ~~id~lI~nAG 141 (320)
..+|+++.+.-
T Consensus 109 ~~fD~If~DPP 119 (171)
T d1ws6a1 109 ERFTVAFMAPP 119 (171)
T ss_dssp CCEEEEEECCC
T ss_pred CccceeEEccc
Confidence 35889988753
|
| >d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein SMu776, middle and C-terminal domains species: Streptococcus mutans [TaxId: 1309]
Probab=86.66 E-value=7.5 Score=32.09 Aligned_cols=83 Identities=13% Similarity=-0.003 Sum_probs=52.8
Q ss_pred CCCEEEEECCC-CcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCC-ceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 52 YGSWALVTGPT-DGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAK-TQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 52 ~gk~vlITGas-~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
.|+.||=..+. ||++.+ .+..|+ .|+.++.++..++...+.+...+-+ .++.++..|+. +..+.+.+.
T Consensus 144 ~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~----~~l~~~~~~- 214 (317)
T d2b78a2 144 AGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF----DYFKYARRH- 214 (317)
T ss_dssp BTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH----HHHHHHHHT-
T ss_pred CCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH----HHHHHHHhh-
Confidence 47888866555 555533 445687 6999999999888887777654322 35677776653 333333332
Q ss_pred cCCCeEEEEEccCCCC
Q 020854 129 EGLDVGVLINNVGISY 144 (320)
Q Consensus 129 ~~~~id~lI~nAG~~~ 144 (320)
...+|+||.+.....
T Consensus 215 -~~~fD~Ii~DPP~f~ 229 (317)
T d2b78a2 215 -HLTYDIIIIDPPSFA 229 (317)
T ss_dssp -TCCEEEEEECCCCC-
T ss_pred -cCCCCEEEEcChhhc
Confidence 235889999875443
|
| >d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Precorrin-6Y methyltransferase (CbiT) domain: Precorrin-6Y methyltransferase (CbiT) species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=86.53 E-value=1.3 Score=33.69 Aligned_cols=77 Identities=14% Similarity=0.143 Sum_probs=53.2
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|.+||=.|+++| .++.++++.+.+|+.++.+++.++.+.+.+++.+-..++.++..|.. +.. ....
T Consensus 33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~--------~~~--~~~~ 99 (186)
T d1l3ia_ 33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAP--------EAL--CKIP 99 (186)
T ss_dssp TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHH--------HHH--TTSC
T ss_pred CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchh--------hcc--cccC
Confidence 4778888888776 33345566778999999999999988888877654457777777642 111 1223
Q ss_pred CeEEEEEccC
Q 020854 132 DVGVLINNVG 141 (320)
Q Consensus 132 ~id~lI~nAG 141 (320)
.+|.++.+.+
T Consensus 100 ~~D~v~~~~~ 109 (186)
T d1l3ia_ 100 DIDIAVVGGS 109 (186)
T ss_dssp CEEEEEESCC
T ss_pred CcCEEEEeCc
Confidence 5778887643
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=86.37 E-value=0.39 Score=39.17 Aligned_cols=36 Identities=22% Similarity=0.189 Sum_probs=31.6
Q ss_pred ccccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEe
Q 020854 48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG 84 (320)
Q Consensus 48 ~~~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~ 84 (320)
..+++|++++|-| .|-.|..+|+.|.+.|++|+.++
T Consensus 31 ~~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs 66 (255)
T d1bgva1 31 NDTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS 66 (255)
T ss_dssp TCCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence 3457799999998 69999999999999999988764
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=86.32 E-value=0.4 Score=35.75 Aligned_cols=35 Identities=20% Similarity=0.183 Sum_probs=28.9
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCCH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNP 87 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~--~Vil~~r~~ 87 (320)
.||.++|.|| |-.|.++|..|.+.|. +|+++++++
T Consensus 1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 4899999998 4568999999999884 788888764
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=86.27 E-value=0.35 Score=40.29 Aligned_cols=33 Identities=21% Similarity=0.313 Sum_probs=23.1
Q ss_pred CEEEEECCCCc-H---HHHHHHHHHHcCCeEEEEeCC
Q 020854 54 SWALVTGPTDG-I---GKSFAFQLAKTGLNLVLVGRN 86 (320)
Q Consensus 54 k~vlITGas~G-I---G~ala~~l~~~G~~Vil~~r~ 86 (320)
|.++|++|+.| - ..+++++|.++|++|..++..
T Consensus 1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~ 37 (351)
T d1f0ka_ 1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA 37 (351)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence 45566555434 3 447999999999999887643
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=86.13 E-value=0.55 Score=32.96 Aligned_cols=63 Identities=19% Similarity=0.365 Sum_probs=43.5
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA 127 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 127 (320)
.+.++.|.| +|-+|+-++....+.|+++++.+.+++.-.. ..--.++..|..|. +.+.++...
T Consensus 10 ~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~----------~va~~~i~~~~~d~--~~l~~~~~~ 72 (111)
T d1kjqa2 10 AATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAM----------HVAHRSHVINMLDG--DALRRVVEL 72 (111)
T ss_dssp TCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGG----------GGSSEEEECCTTCH--HHHHHHHHH
T ss_pred CCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchh----------hcCCeEEECCCCCH--HHHHHHHHh
Confidence 356799998 6799999999999999999999988653110 11124556677665 444454443
|
| >d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Arsenite-translocating ATPase ArsA species: Escherichia coli [TaxId: 562]
Probab=86.05 E-value=0.28 Score=40.05 Aligned_cols=38 Identities=24% Similarity=0.398 Sum_probs=32.8
Q ss_pred cCCCEEEEECCCCcHHHHH-----HHHHHHcCCeEEEEeCCHH
Q 020854 51 KYGSWALVTGPTDGIGKSF-----AFQLAKTGLNLVLVGRNPD 88 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~al-----a~~l~~~G~~Vil~~r~~~ 88 (320)
..|+.++|+.|=||.|+.+ |..|+++|.+|.++|-|..
T Consensus 17 ~~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~ 59 (279)
T d1ihua2 17 RNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA 59 (279)
T ss_dssp TTSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred cCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 4578888888899999886 7899999999999999864
|
| >d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.94 E-value=2 Score=33.76 Aligned_cols=81 Identities=14% Similarity=0.099 Sum_probs=57.9
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcC----CceEEEEEEeCCCCcHHHHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYA----KTQIKSVVVDFSGDLDEGVERIKEA 127 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 127 (320)
.|..||-.|+.+|--.++.-++.....+|+.++++++-++...+.+...+. ...+.....|..+..
T Consensus 76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~---------- 145 (224)
T d1i1na_ 76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY---------- 145 (224)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC----------
T ss_pred CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeeccccc----------
Confidence 478999999999988888888887777999999999988877777754321 234555555654321
Q ss_pred HcCCCeEEEEEccCC
Q 020854 128 IEGLDVGVLINNVGI 142 (320)
Q Consensus 128 ~~~~~id~lI~nAG~ 142 (320)
.....+|.++.+++.
T Consensus 146 ~~~~~fD~I~~~~~~ 160 (224)
T d1i1na_ 146 AEEAPYDAIHVGAAA 160 (224)
T ss_dssp GGGCCEEEEEECSBB
T ss_pred chhhhhhhhhhhcch
Confidence 112257899988774
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=85.89 E-value=0.57 Score=33.75 Aligned_cols=73 Identities=21% Similarity=0.331 Sum_probs=44.6
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEE-EeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCe
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV 133 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 133 (320)
.+.|.|++|-+|+++++.+.++|++++. .+++.... ..+.. +-.|++.+ +...+..+...+.++
T Consensus 2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~~----------~~~~D---VvIDFS~p--~~~~~~l~~~~~~~~ 66 (128)
T d1vm6a3 2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVEE----------LDSPD---VVIDFSSP--EALPKTVDLCKKYRA 66 (128)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEEE----------CSCCS---EEEECSCG--GGHHHHHHHHHHHTC
T ss_pred EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHHH----------hccCC---EEEEecCH--HHHHHHHHHHHhcCC
Confidence 4899999999999999999999998764 34443210 01222 45688865 333333333222234
Q ss_pred EEEEEccCC
Q 020854 134 GVLINNVGI 142 (320)
Q Consensus 134 d~lI~nAG~ 142 (320)
.+|+-..|.
T Consensus 67 p~ViGTTG~ 75 (128)
T d1vm6a3 67 GLVLGTTAL 75 (128)
T ss_dssp EEEECCCSC
T ss_pred CEEEEcCCC
Confidence 477766554
|
| >d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Cell division regulator MinD species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=85.84 E-value=0.33 Score=38.31 Aligned_cols=36 Identities=19% Similarity=0.360 Sum_probs=30.7
Q ss_pred CCCEEEEECCCCcHHHH-----HHHHHHHcCCeEEEEeCCH
Q 020854 52 YGSWALVTGPTDGIGKS-----FAFQLAKTGLNLVLVGRNP 87 (320)
Q Consensus 52 ~gk~vlITGas~GIG~a-----la~~l~~~G~~Vil~~r~~ 87 (320)
.||++.|+|+-||.|+. +|..|+++|.+|.++|-|.
T Consensus 1 m~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D~ 41 (237)
T d1g3qa_ 1 MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL 41 (237)
T ss_dssp CCEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 47899999999999975 6777889999999999663
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=85.81 E-value=0.38 Score=37.49 Aligned_cols=31 Identities=16% Similarity=0.177 Sum_probs=26.9
Q ss_pred EEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH
Q 020854 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP 87 (320)
Q Consensus 56 vlITGas~GIG~ala~~l~~~G~~Vil~~r~~ 87 (320)
|+|.| +|--|...|.+|+++|.+|.++.++.
T Consensus 8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~ 38 (297)
T d2bcgg1 8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD 38 (297)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 67777 56778999999999999999999864
|
| >d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N5-glutamine methyltransferase, HemK domain: N5-glutamine methyltransferase, HemK species: Thermotoga maritima [TaxId: 2336]
Probab=85.75 E-value=1.9 Score=35.19 Aligned_cols=80 Identities=13% Similarity=0.108 Sum_probs=52.1
Q ss_pred CEEEEECCCCc-HHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 54 SWALVTGPTDG-IGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 54 k~vlITGas~G-IG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
++++-.|+++| ||.+++ + ...++|+.++.+++.++-+.+..+..+-..++.....|..+. +....+ +
T Consensus 112 ~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~-------~~~~~~--~ 179 (271)
T d1nv8a_ 112 KTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP-------FKEKFA--S 179 (271)
T ss_dssp CEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG-------GGGGTT--T
T ss_pred cEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc-------cccccC--c
Confidence 44554555554 555554 3 246799999999999888877776655455677777776643 111123 4
Q ss_pred eEEEEEccCCCCC
Q 020854 133 VGVLINNVGISYP 145 (320)
Q Consensus 133 id~lI~nAG~~~~ 145 (320)
+|++|.|......
T Consensus 180 fDlIVsNPPYI~~ 192 (271)
T d1nv8a_ 180 IEMILSNPPYVKS 192 (271)
T ss_dssp CCEEEECCCCBCG
T ss_pred ccEEEEcccccCc
Confidence 6699999887643
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=85.45 E-value=0.63 Score=35.50 Aligned_cols=42 Identities=21% Similarity=0.396 Sum_probs=32.0
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHh
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQA 99 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~ 99 (320)
.+.|.|| |..|.++|..|++.|.+|.+.+|+.+. +..+.+.+
T Consensus 2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~--~~~~~i~~ 43 (180)
T d1txga2 2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDT--EILKSISA 43 (180)
T ss_dssp EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGH--HHHHHHHT
T ss_pred EEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccH--HHHHHHhh
Confidence 3556665 899999999999999999999996543 33445543
|
| >d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein HI0319 (YecO) domain: Hypothetical protein HI0319 (YecO) species: Haemophilus influenzae [TaxId: 727]
Probab=85.38 E-value=2 Score=33.44 Aligned_cols=63 Identities=11% Similarity=0.120 Sum_probs=47.8
Q ss_pred CCEEEEECCCCc-HHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCC
Q 020854 53 GSWALVTGPTDG-IGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115 (320)
Q Consensus 53 gk~vlITGas~G-IG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~ 115 (320)
|.+||=.|++.| +...+++.+...|++|+.+|-+++-++...+.+.+......+.....|..+
T Consensus 40 ~~~vLDlGCGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~~ 103 (225)
T d1im8a_ 40 DSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRH 103 (225)
T ss_dssp TCEEEEESCTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTT
T ss_pred CCEEEEeccchhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhhc
Confidence 567888887755 556777776667899999999999998888777766556667777666654
|
| >d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Putative sarcosine dimethylglycine methyltransferase species: Red algae (Galdieria sulphuraria) [TaxId: 130081]
Probab=85.35 E-value=2.7 Score=34.00 Aligned_cols=78 Identities=14% Similarity=0.021 Sum_probs=53.8
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKT-GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~-G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
.|.+||=.|++.|. ++..|+++ |++|+.++-++.-++...+.....+-..++.+..+|..+- .++.
T Consensus 67 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l----------~~~~ 133 (282)
T d2o57a1 67 RQAKGLDLGAGYGG---AARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEI----------PCED 133 (282)
T ss_dssp TTCEEEEETCTTSH---HHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSC----------SSCT
T ss_pred CCCEEEEeCCCCcH---HHhhhhccCCcEEEEEeccchhhhhhhcccccccccccccccccccccc----------cccc
Confidence 47889988887662 34445543 8899999999988877777666655456788888887653 1122
Q ss_pred CCeEEEEEccCC
Q 020854 131 LDVGVLINNVGI 142 (320)
Q Consensus 131 ~~id~lI~nAG~ 142 (320)
..+|+|+.+-..
T Consensus 134 ~sfD~V~~~~~l 145 (282)
T d2o57a1 134 NSYDFIWSQDAF 145 (282)
T ss_dssp TCEEEEEEESCG
T ss_pred cccchhhccchh
Confidence 357888876543
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=85.28 E-value=0.31 Score=40.18 Aligned_cols=35 Identities=20% Similarity=0.277 Sum_probs=29.1
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP 87 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~ 87 (320)
..|.|+|.||. --|...|.+|+++|++|+++.++.
T Consensus 29 ~pkkV~IIGaG-~aGLsaA~~L~~~G~~V~vlE~~~ 63 (370)
T d2iida1 29 NPKHVVIVGAG-MAGLSAAYVLAGAGHQVTVLEASE 63 (370)
T ss_dssp SCCEEEEECCB-HHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCeEEEECCC-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence 35788888874 558899999999999999998764
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=84.98 E-value=0.43 Score=38.77 Aligned_cols=31 Identities=32% Similarity=0.548 Sum_probs=26.3
Q ss_pred EEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH
Q 020854 56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP 87 (320)
Q Consensus 56 vlITGas~GIG~ala~~l~~~G~~Vil~~r~~ 87 (320)
|+|.|| |-.|.++|.+|+++|.+|+++++..
T Consensus 6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~ 36 (281)
T d2gf3a1 6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD 36 (281)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 566665 6779999999999999999999853
|
| >d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: COMT-like domain: Catechol O-methyltransferase, COMT species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=84.73 E-value=1.5 Score=34.36 Aligned_cols=84 Identities=13% Similarity=0.104 Sum_probs=57.7
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
+.|+||=+|...|......-+....|.+|+.++.+++..+...+.+...+-..++..+..|.. +.+.++.+.....
T Consensus 56 kpk~ILEiGt~~G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~Gd~~----e~l~~l~~~~~~~ 131 (214)
T d2cl5a1 56 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNGASQ----DLIPQLKKKYDVD 131 (214)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH----HHGGGHHHHSCCC
T ss_pred CCCEEEEEccCchhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeeecccc----ccccchhhccccc
Confidence 458999999887776443333234567999999999888877777776655566888776654 3345555555544
Q ss_pred CeEEEEEc
Q 020854 132 DVGVLINN 139 (320)
Q Consensus 132 ~id~lI~n 139 (320)
.+|.++.-
T Consensus 132 ~~D~ifiD 139 (214)
T d2cl5a1 132 TLDMVFLD 139 (214)
T ss_dssp CEEEEEEC
T ss_pred ccceeeec
Confidence 67887765
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=84.40 E-value=0.52 Score=37.59 Aligned_cols=34 Identities=24% Similarity=0.321 Sum_probs=27.6
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP 87 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~ 87 (320)
.+.|+|.|| |--|..+|..|+++|.+|++..|+.
T Consensus 4 ~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~ 37 (265)
T d2voua1 4 TDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP 37 (265)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 456888887 5567778888999999999999864
|
| >d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Putative methylase EF2452 species: Enterococcus faecalis [TaxId: 1351]
Probab=84.29 E-value=1.3 Score=33.74 Aligned_cols=80 Identities=16% Similarity=0.236 Sum_probs=52.4
Q ss_pred cCCCEEEE-ECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 51 KYGSWALV-TGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlI-TGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
..|+.+|= -.|||++|.+ .+.+|+ +|+.++.|.+..+.+.+.+...+....+..+..|+. +.++++...
T Consensus 40 ~~~~~vLDlfaGsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~~----~~l~~~~~~- 110 (182)
T d2fhpa1 40 FDGGMALDLYSGSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDAN----RALEQFYEE- 110 (182)
T ss_dssp CSSCEEEETTCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH----HHHHHHHHT-
T ss_pred cCCCEEEEcccccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccch----hhhhhhccc-
Confidence 34777774 4455668875 456888 699999999988887777765544456777776653 333333332
Q ss_pred cCCCeEEEEEcc
Q 020854 129 EGLDVGVLINNV 140 (320)
Q Consensus 129 ~~~~id~lI~nA 140 (320)
..++|+++...
T Consensus 111 -~~~fDlIflDP 121 (182)
T d2fhpa1 111 -KLQFDLVLLDP 121 (182)
T ss_dssp -TCCEEEEEECC
T ss_pred -CCCcceEEech
Confidence 23578888664
|
| >d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TehB-like domain: Putative methyltransferase TehB species: Salmonella typhimurium [TaxId: 90371]
Probab=83.70 E-value=2.7 Score=31.90 Aligned_cols=76 Identities=16% Similarity=0.171 Sum_probs=52.0
Q ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcC
Q 020854 51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG 130 (320)
Q Consensus 51 ~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 130 (320)
+.++.||=.|++.|- .+..|+++|++|+.++.+++.++...+...+.+ -..+.....|+.+.. ..
T Consensus 29 ~~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~-~~~~~~~~~d~~~~~-----------~~ 93 (198)
T d2i6ga1 29 VAPGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAEG-LDNLQTDLVDLNTLT-----------FD 93 (198)
T ss_dssp SCSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CTTEEEEECCTTTCC-----------CC
T ss_pred CCCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhcc-ccchhhhheeccccc-----------cc
Confidence 345679999996554 556788899999999999998887766665443 224666666766431 11
Q ss_pred CCeEEEEEccC
Q 020854 131 LDVGVLINNVG 141 (320)
Q Consensus 131 ~~id~lI~nAG 141 (320)
..+|+++.+.-
T Consensus 94 ~~fD~I~~~~~ 104 (198)
T d2i6ga1 94 GEYDFILSTVV 104 (198)
T ss_dssp CCEEEEEEESC
T ss_pred ccccEEEEeee
Confidence 25778887654
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=83.69 E-value=0.65 Score=37.43 Aligned_cols=34 Identities=24% Similarity=0.373 Sum_probs=30.5
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEe
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG 84 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~ 84 (320)
+++|++|+|-| .|-.|..+|+.|.+.|++|+.++
T Consensus 28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs 61 (242)
T d1v9la1 28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS 61 (242)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence 46799999996 89999999999999999998765
|
| >d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Putative methyltransferase SPy1538 species: Streptococcus pyogenes [TaxId: 1314]
Probab=83.65 E-value=1.8 Score=31.74 Aligned_cols=77 Identities=14% Similarity=0.135 Sum_probs=52.1
Q ss_pred cCCCEEEEECCCCc-HHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHH
Q 020854 51 KYGSWALVTGPTDG-IGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128 (320)
Q Consensus 51 ~~gk~vlITGas~G-IG~ala~~l~~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 128 (320)
++|+.||=.|+.+| +|. +.+.+|+ +|+.++.+.+..+...+.+...+...++..++.|.. + ..+.
T Consensus 13 ~~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~----~----~l~~- 79 (152)
T d2esra1 13 FNGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAE----R----AIDC- 79 (152)
T ss_dssp CCSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHH----H----HHHH-
T ss_pred CCCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhccccc----c----cccc-
Confidence 45999887776655 555 4566887 799999999988887777766554556777776643 1 2222
Q ss_pred cCCCeEEEEEcc
Q 020854 129 EGLDVGVLINNV 140 (320)
Q Consensus 129 ~~~~id~lI~nA 140 (320)
.....|+++.+.
T Consensus 80 ~~~~fDiIf~DP 91 (152)
T d2esra1 80 LTGRFDLVFLDP 91 (152)
T ss_dssp BCSCEEEEEECC
T ss_pred cccccceeEech
Confidence 223578988764
|
| >d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Succinyl-CoA synthetase domains family: Succinyl-CoA synthetase domains domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=82.99 E-value=2.1 Score=31.69 Aligned_cols=83 Identities=19% Similarity=0.207 Sum_probs=50.0
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCc-HHHHHHHHH-HHc
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDL-DEGVERIKE-AIE 129 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~-~~~ 129 (320)
+|+.+.|.+.|||.|--++..+.+.|.++. .-+++..+ ++++.-+......-++|+.-.. .+.+.+..+ -..
T Consensus 2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~--~l~~~t~~----~L~~~lp~~~~~~NPlD~~~~~~~~~~~~~l~~~~~ 75 (163)
T d2csua3 2 RGNKVAIMTNAGGPGVLTADELDKRGLKLA--TLEEKTIE----ELRSFLPPMAAVKNPVDMIASARGEDYYRTAKLLLQ 75 (163)
T ss_dssp SSSEEEEEESCHHHHHHHHHHHHTTTCEEC--CCCHHHHH----HHHHHSCTTCEESSEEECCTTCCHHHHHHHHHHHHH
T ss_pred CCCeEEEEECChHHHHHHHHHHHHcCCccC--CCCHHHHH----HHHHhCCCcccCCCcccccCCCCHHHHHHHHHHHHc
Confidence 588999999999999999999999996653 33443333 3333333333333466766432 344444444 344
Q ss_pred CCCeEEEEEcc
Q 020854 130 GLDVGVLINNV 140 (320)
Q Consensus 130 ~~~id~lI~nA 140 (320)
..++|.++...
T Consensus 76 d~~vd~v~v~~ 86 (163)
T d2csua3 76 DPNVDMLIAIC 86 (163)
T ss_dssp STTCSEEEEEE
T ss_pred CCCcCEEEEee
Confidence 44566665443
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=82.85 E-value=0.7 Score=38.62 Aligned_cols=35 Identities=20% Similarity=0.263 Sum_probs=28.5
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP 87 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~ 87 (320)
+.|.++|.|| |--|...|.+|+++|.+|.++.++.
T Consensus 1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~ 35 (314)
T d2bi7a1 1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRD 35 (314)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCC
Confidence 3578888887 4567888899999999999998764
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=82.51 E-value=0.6 Score=38.32 Aligned_cols=31 Identities=23% Similarity=0.517 Sum_probs=26.3
Q ss_pred EEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCH
Q 020854 56 ALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP 87 (320)
Q Consensus 56 vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~ 87 (320)
|+|.|| |-+|.++|.+|+++|. +|++++|+.
T Consensus 4 ViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~ 35 (305)
T d1pj5a2 4 IVIIGA-GIVGTNLADELVTRGWNNITVLDQGP 35 (305)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred EEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 677766 5899999999999997 699998863
|
| >d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N5-glutamine methyltransferase, HemK domain: N5-glutamine methyltransferase, HemK species: Escherichia coli [TaxId: 562]
Probab=82.42 E-value=1.5 Score=35.88 Aligned_cols=76 Identities=20% Similarity=0.214 Sum_probs=52.9
Q ss_pred EEEEEC-CCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCCe
Q 020854 55 WALVTG-PTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV 133 (320)
Q Consensus 55 ~vlITG-as~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 133 (320)
.++=.| |||-||.+++.++ ..++|+.++.++..++-+.+.....+ -.++.++..|..+.. ...++
T Consensus 111 ~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~-~~~v~~~~~d~~~~~-----------~~~~f 176 (274)
T d2b3ta1 111 RILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLA-IKNIHILQSDWFSAL-----------AGQQF 176 (274)
T ss_dssp EEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHT-CCSEEEECCSTTGGG-----------TTCCE
T ss_pred ceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhC-cccceeeeccccccc-----------CCCce
Confidence 344444 5677888887765 34689999999999887777766543 235788888776431 22368
Q ss_pred EEEEEccCCCC
Q 020854 134 GVLINNVGISY 144 (320)
Q Consensus 134 d~lI~nAG~~~ 144 (320)
|++|.|.....
T Consensus 177 DlIvsNPPYi~ 187 (274)
T d2b3ta1 177 AMIVSNPPYID 187 (274)
T ss_dssp EEEEECCCCBC
T ss_pred eEEEecchhhh
Confidence 89999987654
|
| >d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thermotoga maritima [TaxId: 2336]
Probab=82.37 E-value=7.1 Score=31.91 Aligned_cols=41 Identities=15% Similarity=0.121 Sum_probs=30.0
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcC--CeEEEEeCCHHHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPDKLKDVSD 95 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G--~~Vil~~r~~~~~~~~~~ 95 (320)
.-|.|||.||++| .+++++++.. .+|.++..|++-.+-..+
T Consensus 89 ~pk~VLiiGgG~G---~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~ 131 (295)
T d1inla_ 89 NPKKVLIIGGGDG---GTLREVLKHDSVEKAILCEVDGLVIEAARK 131 (295)
T ss_dssp SCCEEEEEECTTC---HHHHHHTTSTTCSEEEEEESCHHHHHHHHH
T ss_pred CCceEEEecCCch---HHHHHHHhcCCCceEEEecCCHHHHHHHHH
Confidence 3578999999888 5577777653 479999999876554443
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=82.23 E-value=0.52 Score=32.61 Aligned_cols=37 Identities=14% Similarity=0.065 Sum_probs=30.4
Q ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCH
Q 020854 50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP 87 (320)
Q Consensus 50 ~~~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~ 87 (320)
..+||.|+|.|++ -=|..+|.+|++.+.++++..|..
T Consensus 29 ~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~ 65 (107)
T d2gv8a2 29 LFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLG 65 (107)
T ss_dssp GGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTT
T ss_pred hcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecC
Confidence 4669999999986 567889999999888888777654
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.16 E-value=0.96 Score=35.66 Aligned_cols=43 Identities=12% Similarity=-0.049 Sum_probs=36.3
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI 97 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l 97 (320)
.|+.||..|+..| ..+..|+++|++|+.++-++..++...++.
T Consensus 45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~ 87 (229)
T d2bzga1 45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQ 87 (229)
T ss_dssp CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHT
T ss_pred CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHh
Confidence 4678999999887 568888999999999999999887666554
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=82.04 E-value=4.1 Score=27.98 Aligned_cols=34 Identities=26% Similarity=0.165 Sum_probs=26.5
Q ss_pred CCEEEEECCCCcHHHHHHHHHHH---cCCeEEEEeCCH
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAK---TGLNLVLVGRNP 87 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~---~G~~Vil~~r~~ 87 (320)
.|.++|.|| |-+|.++|..|++ .|.+|.++.|.+
T Consensus 18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~ 54 (117)
T d1feca2 18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD 54 (117)
T ss_dssp CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred CCeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence 477888876 7899999977655 488999998753
|
| >d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Sulfolobus tokodaii [TaxId: 111955]
Probab=81.92 E-value=3.2 Score=32.65 Aligned_cols=75 Identities=17% Similarity=0.063 Sum_probs=49.9
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|..||-.|+++|--.++ |++.+.+|+.++++++-.+...+.+.. ...+.+...|..+... ...
T Consensus 70 ~g~~VLdIG~GsGy~ta~---La~l~~~V~aiE~~~~~~~~A~~~~~~---~~nv~~~~~d~~~g~~----------~~~ 133 (224)
T d1vbfa_ 70 KGQKVLEIGTGIGYYTAL---IAEIVDKVVSVEINEKMYNYASKLLSY---YNNIKLILGDGTLGYE----------EEK 133 (224)
T ss_dssp TTCEEEEECCTTSHHHHH---HHHHSSEEEEEESCHHHHHHHHHHHTT---CSSEEEEESCGGGCCG----------GGC
T ss_pred ccceEEEecCCCCHHHHH---HHHHhcccccccccHHHHHHHHHHHhc---ccccccccCchhhcch----------hhh
Confidence 477899999998865444 555667999999999877766554432 3456677777553210 112
Q ss_pred CeEEEEEccCC
Q 020854 132 DVGVLINNVGI 142 (320)
Q Consensus 132 ~id~lI~nAG~ 142 (320)
++|.++.+++.
T Consensus 134 pfD~Iiv~~a~ 144 (224)
T d1vbfa_ 134 PYDRVVVWATA 144 (224)
T ss_dssp CEEEEEESSBB
T ss_pred hHHHHHhhcch
Confidence 57888887764
|
| >d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=81.86 E-value=9.3 Score=31.06 Aligned_cols=84 Identities=15% Similarity=0.124 Sum_probs=50.4
Q ss_pred CCEEEEECCCCcHHHHHHHHHHHc-C-CeEEEEeCCHHHHHHHHHHHHh----------------------hcCCceEEE
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAKT-G-LNLVLVGRNPDKLKDVSDSIQA----------------------KYAKTQIKS 108 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~~-G-~~Vil~~r~~~~~~~~~~~l~~----------------------~~~~~~~~~ 108 (320)
-|.|||.|+++|. +++++++. + .+|.++.-|++-.+-..+.+.. .....+.-.
T Consensus 81 pk~VLiiGgG~G~---~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~~Da~~~l~~~~~~~yDv 157 (290)
T d1xj5a_ 81 PKKVLVIGGGDGG---VLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDA 157 (290)
T ss_dssp CCEEEEETCSSSH---HHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred CcceEEecCCchH---HHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEEccHHHHHhhccccCccE
Confidence 4789999988774 45566665 3 3799999998765544433211 011234556
Q ss_pred EEEeCCCCc--------HHHHHHHHHHHcCCCeEEEEEccC
Q 020854 109 VVVDFSGDL--------DEGVERIKEAIEGLDVGVLINNVG 141 (320)
Q Consensus 109 ~~~D~~~~~--------~~~~~~~~~~~~~~~id~lI~nAG 141 (320)
+-+|.+|.. .++.+.+.+.+.... +++.|+|
T Consensus 158 Ii~D~~dp~~~~~~L~t~eF~~~~~~~L~~~G--i~v~q~~ 196 (290)
T d1xj5a_ 158 VIVDSSDPIGPAKELFEKPFFQSVARALRPGG--VVCTQAE 196 (290)
T ss_dssp EEECCCCTTSGGGGGGSHHHHHHHHHHEEEEE--EEEEECC
T ss_pred EEEcCCCCCCcchhhCCHHHHHHHHHhcCCCc--EEEEecC
Confidence 667777632 445566666665444 5566665
|
| >d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical Protein YjhP domain: Hypothetical Protein YjhP species: Escherichia coli [TaxId: 562]
Probab=81.63 E-value=5 Score=31.41 Aligned_cols=76 Identities=12% Similarity=0.076 Sum_probs=52.7
Q ss_pred CCEEEEECCCCcHHHHHHHHHHH-cCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 53 GSWALVTGPTDGIGKSFAFQLAK-TGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 53 gk~vlITGas~GIG~ala~~l~~-~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
|+.||=.|+..| .++..+++ .|++|+.++-++.-++...+.....+.+.++.+...|..+. ....
T Consensus 34 g~~VLDiGCG~G---~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~~~-----------~~~~ 99 (245)
T d1nkva_ 34 GTRILDLGSGSG---EMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY-----------VANE 99 (245)
T ss_dssp TCEEEEETCTTC---HHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTC-----------CCSS
T ss_pred CCEEEEEcCCCC---HHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhhHHhhc-----------cccC
Confidence 788998888777 23445555 48899999999988877766666655556788888887652 1223
Q ss_pred CeEEEEEccCC
Q 020854 132 DVGVLINNVGI 142 (320)
Q Consensus 132 ~id~lI~nAG~ 142 (320)
.+|.++..-..
T Consensus 100 ~fD~v~~~~~~ 110 (245)
T d1nkva_ 100 KCDVAACVGAT 110 (245)
T ss_dssp CEEEEEEESCG
T ss_pred ceeEEEEEehh
Confidence 57787766543
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=81.53 E-value=4.2 Score=29.32 Aligned_cols=36 Identities=11% Similarity=0.024 Sum_probs=31.7
Q ss_pred CCCEEEEECCC---CcHHHHHHHHHHHcCCeEEEEeCCH
Q 020854 52 YGSWALVTGPT---DGIGKSFAFQLAKTGLNLVLVGRNP 87 (320)
Q Consensus 52 ~gk~vlITGas---~GIG~ala~~l~~~G~~Vil~~r~~ 87 (320)
+-|.+.|.|+| +..|..+++.|.+.|++|+.+..+.
T Consensus 18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~ 56 (139)
T d2d59a1 18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKY 56 (139)
T ss_dssp HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTC
T ss_pred cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcc
Confidence 46899999999 5899999999999999999887653
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=80.88 E-value=3.6 Score=31.27 Aligned_cols=42 Identities=14% Similarity=0.062 Sum_probs=34.0
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVS 94 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~ 94 (320)
..-.|+|.|| |-.|.+-++-....|++|.+.|.+.++++++.
T Consensus 28 ~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~ 69 (183)
T d1l7da1 28 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE 69 (183)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH
T ss_pred CCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHH
Confidence 3457888876 56788888888899999999999998877654
|
| >d2h00a1 c.66.1.54 (A:5-254) Methyltransferase 10 domain containing protein METT10D {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Methyltransferase 10 domain domain: Methyltransferase 10 domain containing protein METT10D species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.53 E-value=1.2 Score=35.88 Aligned_cols=85 Identities=13% Similarity=0.037 Sum_probs=57.2
Q ss_pred CEEEEEC-CCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCCC
Q 020854 54 SWALVTG-PTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD 132 (320)
Q Consensus 54 k~vlITG-as~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 132 (320)
..++=.| |||-|+..+++++- +++|+.++.+++.++-..+.++..+-..++.....|..+.... .+. ......
T Consensus 63 ~~~LDiGtGsg~I~~~l~~~~~--~~~~~~~Di~~~al~~A~~N~~~n~l~~~~~~~~~~~~~~~~~---~~~-~~~~~~ 136 (250)
T d2h00a1 63 RRGIDIGTGASCIYPLLGATLN--GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMD---ALK-EESEII 136 (250)
T ss_dssp CEEEEESCTTTTHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTT---TST-TCCSCC
T ss_pred ceEEEeCCCchHHHHHHHHhCC--CccccceecCHHHHHHHHHHHHHhCCCcceeeeeeccHHhhhh---hhh-hcccCc
Confidence 4566666 45679999998874 7899999999999988877776655456677777665433111 010 112235
Q ss_pred eEEEEEccCCCC
Q 020854 133 VGVLINNVGISY 144 (320)
Q Consensus 133 id~lI~nAG~~~ 144 (320)
+|++|.|.-...
T Consensus 137 fD~ivsNPPY~~ 148 (250)
T d2h00a1 137 YDFCMCNPPFFA 148 (250)
T ss_dssp BSEEEECCCCC-
T ss_pred eeEEEecCcccc
Confidence 779999987754
|
| >d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Putative spermidine synthetase PF0127 (SpeE) species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=80.43 E-value=7.8 Score=31.24 Aligned_cols=38 Identities=18% Similarity=0.217 Sum_probs=25.5
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-eEEEEeCCHHHHHH
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKD 92 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~-~Vil~~r~~~~~~~ 92 (320)
..+.|||.|+++|. +++++++.+. +|.++..|++-.+-
T Consensus 72 ~p~~vLiiG~G~G~---~~~~~l~~~~~~v~~VEiD~~Vi~~ 110 (276)
T d1mjfa_ 72 KPKRVLVIGGGDGG---TVREVLQHDVDEVIMVEIDEDVIMV 110 (276)
T ss_dssp CCCEEEEEECTTSH---HHHHHTTSCCSEEEEEESCHHHHHH
T ss_pred CCceEEEecCCchH---HHHHHHHhCCceEEEecCCHHHHHH
Confidence 35789999988773 3455455553 78888888765443
|
| >d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein YcgJ species: Bacillus subtilis [TaxId: 1423]
Probab=80.29 E-value=5.3 Score=30.95 Aligned_cols=77 Identities=10% Similarity=-0.012 Sum_probs=53.1
Q ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEEeCCCCcHHHHHHHHHHHcCC
Q 020854 52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL 131 (320)
Q Consensus 52 ~gk~vlITGas~GIG~ala~~l~~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 131 (320)
.|.+||=.|++.|. ++..|+++|.+|+.++-+++-++...+.....+ -..+.+...|..+- .++..
T Consensus 16 ~~~rILDiGcGtG~---~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~-~~~~~~~~~d~~~~----------~~~~~ 81 (234)
T d1xxla_ 16 AEHRVLDIGAGAGH---TALAFSPYVQECIGVDATKEMVEVASSFAQEKG-VENVRFQQGTAESL----------PFPDD 81 (234)
T ss_dssp TTCEEEEESCTTSH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHT-CCSEEEEECBTTBC----------CSCTT
T ss_pred CCCEEEEeCCcCcH---HHHHHHHhCCeEEEEeCChhhhhhhhhhhcccc-cccccccccccccc----------ccccc
Confidence 36789999998884 445667788999999999988877766665543 23577788887642 01223
Q ss_pred CeEEEEEccCC
Q 020854 132 DVGVLINNVGI 142 (320)
Q Consensus 132 ~id~lI~nAG~ 142 (320)
.+|+++.+-.+
T Consensus 82 ~fD~v~~~~~l 92 (234)
T d1xxla_ 82 SFDIITCRYAA 92 (234)
T ss_dssp CEEEEEEESCG
T ss_pred ccceeeeecee
Confidence 57787766443
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=80.24 E-value=0.71 Score=36.99 Aligned_cols=31 Identities=26% Similarity=0.275 Sum_probs=26.8
Q ss_pred EEEEECCCCcHHHHHHHHHHHcCCeEEEEeCC
Q 020854 55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN 86 (320)
Q Consensus 55 ~vlITGas~GIG~ala~~l~~~G~~Vil~~r~ 86 (320)
.|+|.|| |--|.+.|.+|+++|++|+++.++
T Consensus 2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~ 32 (347)
T d2ivda1 2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESS 32 (347)
T ss_dssp CEEEECC-BHHHHHHHHHHHTTTCCEEEECSS
T ss_pred eEEEECC-CHHHHHHHHHHHhCCCCEEEEecC
Confidence 3788887 667899999999999999999875
|