Citrus Sinensis ID: 020858
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 320 | ||||||
| 255564059 | 346 | zinc finger protein, putative [Ricinus c | 0.968 | 0.895 | 0.702 | 1e-136 | |
| 224133934 | 342 | predicted protein [Populus trichocarpa] | 0.95 | 0.888 | 0.691 | 1e-130 | |
| 359496350 | 332 | PREDICTED: probable S-acyltransferase At | 0.915 | 0.882 | 0.708 | 1e-123 | |
| 297744936 | 454 | unnamed protein product [Vitis vinifera] | 0.893 | 0.629 | 0.707 | 1e-120 | |
| 357483985 | 345 | Palmitoyltransferase ERF2 [Medicago trun | 0.934 | 0.866 | 0.632 | 1e-111 | |
| 449434102 | 347 | PREDICTED: probable S-acyltransferase At | 0.981 | 0.904 | 0.612 | 1e-107 | |
| 388497244 | 326 | unknown [Medicago truncatula] | 0.871 | 0.855 | 0.599 | 1e-105 | |
| 356538355 | 341 | PREDICTED: probable S-acyltransferase At | 0.971 | 0.912 | 0.566 | 1e-103 | |
| 18409331 | 340 | putative S-acyltransferase [Arabidopsis | 0.928 | 0.873 | 0.581 | 1e-94 | |
| 21593168 | 340 | unknown [Arabidopsis thaliana] | 0.928 | 0.873 | 0.578 | 1e-93 |
| >gi|255564059|ref|XP_002523028.1| zinc finger protein, putative [Ricinus communis] gi|223537750|gb|EEF39370.1| zinc finger protein, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 238/339 (70%), Positives = 273/339 (80%), Gaps = 29/339 (8%)
Query: 10 RDSCAPVLDRCFRLVPCLADPARRSSLGLKAALVTLHLVFVGVIFLFDSELIEKTKHEPW 69
R+SC L C+RL PCLADPARRS+LGLK ALV LHL++VG++F+FD +LIEK + EPW
Sbjct: 8 RESCHGALHGCYRLFPCLADPARRSALGLKVALVMLHLIYVGILFIFDDDLIEKARQEPW 67
Query: 70 YITFYLLLFVATLVQYFITSGSSPGYVLDAMRHANERNALFQKISTTSKQPASSKNGNMV 129
YI YLLLFVATLVQYF T+ SSPGYVLDAMR N++NA F K S SKQPASSKNG+++
Sbjct: 68 YIVLYLLLFVATLVQYFATACSSPGYVLDAMRGLNDKNAAFAKASIPSKQPASSKNGSLI 127
Query: 130 ITMEGSRPGRSFSGSNATSWTKLVLDLYPPGTSIRSLTCSYCNVEQPPRAKHCHDCDRCV 189
IT++ SR G++ SGSN TSWTK+VLD+YPPGTS+R+LTCSYCNVEQPPRAKHCHDCD+CV
Sbjct: 128 ITVDESRSGKTSSGSNITSWTKIVLDMYPPGTSVRTLTCSYCNVEQPPRAKHCHDCDKCV 187
Query: 190 LQFDHHCVWLGTCVGLVNHCRF-----------------------------WWKDVIMIV 220
LQFDHHCVWLGTC+G NHCRF WWKD IMI+
Sbjct: 188 LQFDHHCVWLGTCIGQGNHCRFWWYICEETTLCLWTGILYIAYLKANITRAWWKDAIMII 247
Query: 221 LLIILAISLIFLLLLLLFHSYLILTNQTTYELVRRRRIPYLRGIPERVYPFSDGVCRNLY 280
LL+ L+I+ IFLLLLLLFHSYLILTNQTTYELVRRRRIPYLRGIPERVYPFS G CRNLY
Sbjct: 248 LLVTLSIASIFLLLLLLFHSYLILTNQTTYELVRRRRIPYLRGIPERVYPFSKGACRNLY 307
Query: 281 KLCCVKASVYNLERLPTAQEIEEKCRPYTCLDFLTCRCC 319
+ CCV++S+YNLERLPT E+EEK RPYTCLDFLTCRCC
Sbjct: 308 EFCCVRSSLYNLERLPTPIELEEKSRPYTCLDFLTCRCC 346
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224133934|ref|XP_002327715.1| predicted protein [Populus trichocarpa] gi|222836800|gb|EEE75193.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|359496350|ref|XP_002270981.2| PREDICTED: probable S-acyltransferase At3g51390 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297744936|emb|CBI38475.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|357483985|ref|XP_003612279.1| Palmitoyltransferase ERF2 [Medicago truncatula] gi|355513614|gb|AES95237.1| Palmitoyltransferase ERF2 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|449434102|ref|XP_004134835.1| PREDICTED: probable S-acyltransferase At3g51390-like [Cucumis sativus] gi|449491275|ref|XP_004158847.1| PREDICTED: probable S-acyltransferase At3g51390-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|388497244|gb|AFK36688.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356538355|ref|XP_003537669.1| PREDICTED: probable S-acyltransferase At3g51390-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|18409331|ref|NP_566950.1| putative S-acyltransferase [Arabidopsis thaliana] gi|75232248|sp|Q7XA86.1|ZDH11_ARATH RecName: Full=Probable S-acyltransferase At3g51390; AltName: Full=Probable palmitoyltransferase At3g51390; AltName: Full=Zinc finger DHHC domain-containing protein At3g51390 gi|33589688|gb|AAQ22610.1| At3g51390 [Arabidopsis thaliana] gi|332645266|gb|AEE78787.1| putative S-acyltransferase [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|21593168|gb|AAM65117.1| unknown [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 320 | ||||||
| TAIR|locus:2081795 | 340 | AT3G51390 [Arabidopsis thalian | 0.606 | 0.570 | 0.658 | 1.8e-99 | |
| ZFIN|ZDB-GENE-070705-356 | 270 | zdhhc12b "zinc finger, DHHC-ty | 0.168 | 0.2 | 0.509 | 3.8e-20 | |
| UNIPROTKB|Q96GR4 | 267 | ZDHHC12 "Probable palmitoyltra | 0.168 | 0.202 | 0.5 | 1.2e-18 | |
| ZFIN|ZDB-GENE-081104-40 | 270 | zdhhc12a "zinc finger, DHHC-ty | 0.146 | 0.174 | 0.553 | 1.4e-18 | |
| UNIPROTKB|Q5T269 | 281 | ZDHHC12 "Probable palmitoyltra | 0.168 | 0.192 | 0.5 | 4.5e-17 | |
| UNIPROTKB|E1B6X9 | 268 | ZDHHC12 "Uncharacterized prote | 0.137 | 0.164 | 0.568 | 7.2e-17 | |
| UNIPROTKB|Q5T266 | 205 | ZDHHC12 "Probable palmitoyltra | 0.168 | 0.263 | 0.5 | 1.2e-16 | |
| UNIPROTKB|F1RR67 | 238 | ZDHHC12 "Uncharacterized prote | 0.137 | 0.184 | 0.545 | 2e-16 | |
| RGD|1306593 | 267 | Zdhhc12 "zinc finger, DHHC-typ | 0.137 | 0.164 | 0.568 | 2.4e-16 | |
| UNIPROTKB|Q6DGF5 | 267 | Zdhhc12 "Probable palmitoyltra | 0.137 | 0.164 | 0.568 | 2.4e-16 |
| TAIR|locus:2081795 AT3G51390 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 717 (257.5 bits), Expect = 1.8e-99, Sum P(2) = 1.8e-99
Identities = 129/196 (65%), Positives = 154/196 (78%)
Query: 18 DRCFRLVPCLADPARRSSLGLKAALVTLHLVFVGVIFLFDSELIEKTKHEPWYITFYLLL 77
D+C +PCL+DP RRSSL LK ALV LHLVF+G +FLFD+E IEKTK +PWY+ Y+LL
Sbjct: 16 DQCLLNLPCLSDPVRRSSLLLKLALVALHLVFIGFLFLFDAEFIEKTKRDPWYMGCYILL 75
Query: 78 FVATLVQYFITSGSSPGYVLDAMRHANERNALFQKISTTSKQPASSKNGNMVITMEGSRP 137
F ATL+QYF+TSGSSPGYV+DAMR E +A+++ STTS Q AS K+ ++V+ +EG
Sbjct: 76 FSATLLQYFVTSGSSPGYVVDAMRDVCEASAMYRNPSTTSIQHASRKSESVVVNVEGG-- 133
Query: 138 GRSFSGSNATSWTKLVLDLYPPGTSIRSLTCSYCNVEQPPRAKHCHDCDRCVLQFDHHCV 197
S T W KLVLDLYPPGTSIR+LTC YC+VEQPPR KHCHDCDRCVLQFDHHCV
Sbjct: 134 SASCPRRPPTPWGKLVLDLYPPGTSIRNLTCGYCHVEQPPRTKHCHDCDRCVLQFDHHCV 193
Query: 198 WLGTCVGLVNHCRFWW 213
WLGTC+G NH +FWW
Sbjct: 194 WLGTCIGQKNHSKFWW 209
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| ZFIN|ZDB-GENE-070705-356 zdhhc12b "zinc finger, DHHC-type containing 12b" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q96GR4 ZDHHC12 "Probable palmitoyltransferase ZDHHC12" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-081104-40 zdhhc12a "zinc finger, DHHC-type containing 12a" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q5T269 ZDHHC12 "Probable palmitoyltransferase ZDHHC12" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1B6X9 ZDHHC12 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q5T266 ZDHHC12 "Probable palmitoyltransferase ZDHHC12" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1RR67 ZDHHC12 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| RGD|1306593 Zdhhc12 "zinc finger, DHHC-type containing 12" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q6DGF5 Zdhhc12 "Probable palmitoyltransferase ZDHHC12" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 320 | |||
| pfam01529 | 167 | pfam01529, zf-DHHC, DHHC palmitoyltransferase | 2e-24 | |
| COG5273 | 309 | COG5273, COG5273, Uncharacterized protein containi | 1e-18 |
| >gnl|CDD|216554 pfam01529, zf-DHHC, DHHC palmitoyltransferase | Back alignment and domain information |
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Score = 97.2 bits (242), Expect = 2e-24
Identities = 45/137 (32%), Positives = 59/137 (43%), Gaps = 35/137 (25%)
Query: 155 DLYPPGTSIRSLTCSYCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGTCVGLVNH------ 208
+ CS CN+ +PPR+ HC C+RCVL+FDHHC WL C+G NH
Sbjct: 31 ESEEGDEEDELKFCSTCNIIKPPRSHHCRVCNRCVLRFDHHCPWLNNCIGRRNHKYFLLF 90
Query: 209 ----------------------CRFWWKDVIMIVLLIILAISLI-------FLLLLLLFH 239
R +I+ L I L+ FL LL FH
Sbjct: 91 LLYLTLYLILLLVLSFYYLVYLIRNIELFFFLILSLFSSIILLVLSLFFLLFLSFLLFFH 150
Query: 240 SYLILTNQTTYELVRRR 256
YLIL N TTYE ++++
Sbjct: 151 LYLILKNITTYEYIKKK 167
|
This family includes the well known DHHC zinc binding domain as well as three of the four conserved transmembrane regions found in this family of palmitoyltransferase enzymes. Length = 167 |
| >gnl|CDD|227598 COG5273, COG5273, Uncharacterized protein containing DHHC-type Zn finger [General function prediction only] | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 320 | |||
| KOG1314 | 414 | consensus DHHC-type Zn-finger protein [General fun | 100.0 | |
| KOG1315 | 307 | consensus Predicted DHHC-type Zn-finger protein [G | 100.0 | |
| KOG1311 | 299 | consensus DHHC-type Zn-finger proteins [General fu | 100.0 | |
| PF01529 | 174 | zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0 | 100.0 | |
| KOG1313 | 309 | consensus DHHC-type Zn-finger proteins [General fu | 100.0 | |
| COG5273 | 309 | Uncharacterized protein containing DHHC-type Zn fi | 100.0 | |
| KOG0509 | 600 | consensus Ankyrin repeat and DHHC-type Zn-finger d | 99.94 | |
| KOG1312 | 341 | consensus DHHC-type Zn-finger proteins [General fu | 99.94 | |
| KOG1311 | 299 | consensus DHHC-type Zn-finger proteins [General fu | 87.4 | |
| PF13240 | 23 | zinc_ribbon_2: zinc-ribbon domain | 85.99 |
| >KOG1314 consensus DHHC-type Zn-finger protein [General function prediction only] | Back alignment and domain information |
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Probab=100.00 E-value=1.8e-43 Score=320.87 Aligned_cols=196 Identities=28% Similarity=0.545 Sum_probs=154.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCccCCccccchHHhHHhhhhccCCCCCCCCCCCCccccccCCCCCCCCCCCCCcch
Q 020858 70 YITFYLLLFVATLVQYFITSGSSPGYVLDAMRHANERNALFQKISTTSKQPASSKNGNMVITMEGSRPGRSFSGSNATSW 149 (320)
Q Consensus 70 ~~~i~~~l~~~~l~~y~~~~~~dPG~vp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (320)
.-+.|.+...+++++|+.+++++||++|.++.++..+++.+
T Consensus 50 n~i~f~~~~~m~~~ny~~A~~~gPG~vp~~wkPe~~~D~~~--------------------------------------- 90 (414)
T KOG1314|consen 50 NQITFLLWTSMILYNYFNAIFTGPGFVPLGWKPENPKDEMF--------------------------------------- 90 (414)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCChhHHH---------------------------------------
Confidence 55777888999999999999999999999998654443322
Q ss_pred hhhhhccCCCCCcccceecccCCcccCCCCccCcCCCcccCCCcccCcCCCcccccccchhhh-----------------
Q 020858 150 TKLVLDLYPPGTSIRSLTCSYCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGTCVGLVNHCRFW----------------- 212 (320)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~C~~C~~~kP~Rs~HC~~C~rCV~r~DHHCpWv~nCIG~~N~r~F~----------------- 212 (320)
.+||.+|+.+|++|||||+.|||||.+|||||||+|||||..||.+|.
T Consensus 91 ---------------lqfCk~CqgYKapRSHHCrkCnrCvmkMDHHCPWinnCVG~aNh~~F~~FLlf~ivG~ih~tiI~ 155 (414)
T KOG1314|consen 91 ---------------LQFCKKCQGYKAPRSHHCRKCNRCVMKMDHHCPWINNCVGWANHAYFLRFLLFSIVGCIHGTIIL 155 (414)
T ss_pred ---------------HHHHhhccCcCCCccccchHHHHHHHhhccCCcchhhcccccccHHHHHHHHHHHHhcccceeee
Confidence 179999999999999999999999999999999999999999999987
Q ss_pred -----------hhh-------------hhHHHH----HHHHHHHHHHHHHHHHHHHHHHHhCchhHHHHHh----ccccc
Q 020858 213 -----------WKD-------------VIMIVL----LIILAISLIFLLLLLLFHSYLILTNQTTYELVRR----RRIPY 260 (320)
Q Consensus 213 -----------~~~-------------~~~i~~----~~~~~~~~~~~~~L~~~h~~lI~~n~TT~E~~~~----~r~~~ 260 (320)
|.. ...++. +-+.+...+.+++||+.|+..|.+|+|.+|.+.- .|..+
T Consensus 156 ~~~~~~~Iy~~W~~~~g~~hlp~v~ft~~~li~~vfslgla~gv~la~t~Lf~~qlk~Il~nrt~IE~wi~~Ka~~rr~~ 235 (414)
T KOG1314|consen 156 VCAQYRGIYFRWYIKYGLRHLPIVFFTLSSLIALVFSLGLAIGVVLALTMLFFIQLKQILNNRTGIESWIVEKAMDRREY 235 (414)
T ss_pred hhHHHHHHHHHHHhhcccccCceeeccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHh
Confidence 310 111122 2233444556779999999999999999999862 23333
Q ss_pred ccCC--CCccCCCCHhHHHhHhhccccc----CCc-------------cccccCCChhHhhhccCCceEeeccCcccc
Q 020858 261 LRGI--PERVYPFSDGVCRNLYKLCCVK----ASV-------------YNLERLPTAQEIEEKCRPYTCLDFLTCRCC 319 (320)
Q Consensus 261 ~~~~--~~~~npfd~G~~~N~~~~~~~~----~~~-------------~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~ 319 (320)
.... .+...|||.|++.|+++++++. ..+ +...++-+..+.|.|.+.|.|.+.+||+||
T Consensus 236 ~~~d~~~~f~ypydlgWr~n~r~vf~~~~~~~gdg~~wPv~~gc~qytlt~eql~qk~~kr~rsr~~~~~~~~tG~~~ 313 (414)
T KOG1314|consen 236 YFNDDEGEFTYPYDLGWRINLREVFFQNKKEEGDGIEWPVVEGCVQYTLTIEQLTQKLDKRGRSRLFKCIEDVTGDCC 313 (414)
T ss_pred hccCCCCceeeeccccccccHHHHhhhccccCCCCccccccCcccccceeHHHHHHHHHhhcCeEEEEeccCCCCCcc
Confidence 3332 5567999999888999998775 222 223467788889999999999999999997
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| >KOG1315 consensus Predicted DHHC-type Zn-finger protein [General function prediction only] | Back alignment and domain information |
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| >KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only] | Back alignment and domain information |
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| >PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
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| >KOG1313 consensus DHHC-type Zn-finger proteins [General function prediction only] | Back alignment and domain information |
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| >COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only] | Back alignment and domain information |
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| >KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only] | Back alignment and domain information |
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| >KOG1312 consensus DHHC-type Zn-finger proteins [General function prediction only] | Back alignment and domain information |
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| >KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only] | Back alignment and domain information |
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| >PF13240 zinc_ribbon_2: zinc-ribbon domain | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00