Citrus Sinensis ID: 020887

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320
MEKALHRQRILLQHLQPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR
cHHHHHHHHHHHHcccccccccccccccHHHHccccccccccccccccccEEEEcccccccccccccccccccHHHHHHHHHHHHHHHccccccccccEEEEcccccccccccHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHcccccEEEEEcccccccccccccccccccHHHHHHHccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEccccccEEEEEEEccccccccccHHHHcccccccccccccccccccccHHHHHHHHHccHHHHHHccccccEEEc
cHHHHHHHHHHHHHcccccccccccccccHHHEcccccHHHHccccccccEEEEEEEEcccEEccccccccccHHHHHHHHHHHHHHHccccHHHHcHEEEHHHcHcccccHHHHHHHHHHccccccccEEEEEcHHHHHHHHHHHHHHHHHcccccEEEEEEEEEHHHHccccccccccccHHHHcHHHHHccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccccEccEEEccccccccccccEEEcccccccccccHHHHccccEccccccccEcccEcccEEEEEEEEEEEHHHHHHccccccEEEc
MEKALHRQRILLQhlqpsssqtsdspaisASICSageaagyhrkpafdddVVIVAAYRTAICKAkrggfkdtladDLLAPVLKAVIEKtrlnpsevgdivvgtvlapgstRAMECRMAAfyagfpetvplrtvnrqCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISvvgqvnpkveiftqardcllpmgitsenvaqrfgvtrqeqDLAAVESHRRAAAAtasgkfkdeiipvntkivdpktgveKRVTISvddgirpnttiADLAKlkpafkkdgtttagnasqvsdgAGAVLLMKRSLAvqkglpilgvfr
MEKALHRQRILLqhlqpsssqtsdsPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKakrggfkdtlaDDLLAPVLKAVIEktrlnpsevgdivvGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAaatasgkfkdeiipvntkivdpktgvekrvtisvddgirpnttiadlaklkpafkkdgtttagnasqvsdGAGAVLLMKRslavqkglpilgvfr
MEKAlhrqrillqhlqPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLaaveshrraaaatasGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR
*******************************ICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVT**********************KFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKL*********************AGAVLLMKRSLAVQKGLPILGV**
*****HR*RILL*********************************AFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNS**********VEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR
********RILLQHL*************SASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQ*******************GKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR
**K*LHR**ILLQHLQ*********************A*GYH*KPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MEKALHRQRILLQHLQPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query320 2.2.26 [Sep-21-2011]
Q56WD9 462 3-ketoacyl-CoA thiolase 2 yes no 1.0 0.692 0.766 1e-139
Q8LF48 443 3-ketoacyl-CoA thiolase 1 no no 0.978 0.706 0.746 1e-131
Q570C8 457 3-ketoacyl-CoA thiolase 5 no no 0.990 0.693 0.698 1e-128
P07871 424 3-ketoacyl-CoA thiolase B yes no 0.953 0.719 0.531 6e-85
Q921H8 424 3-ketoacyl-CoA thiolase A yes no 0.95 0.716 0.526 2e-84
Q8VCH0 424 3-ketoacyl-CoA thiolase B yes no 0.953 0.719 0.528 9e-84
P21775 424 3-ketoacyl-CoA thiolase A yes no 0.953 0.719 0.522 6e-83
P09110 424 3-ketoacyl-CoA thiolase, yes no 0.953 0.719 0.506 2e-81
Q05493 414 3-ketoacyl-CoA thiolase, yes no 0.831 0.642 0.527 1e-65
P33291 408 3-ketoacyl-CoA thiolase B N/A no 0.828 0.649 0.490 9e-63
>sp|Q56WD9|THIK2_ARATH 3-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidopsis thaliana GN=PED1 PE=1 SV=2 Back     alignment and function desciption
 Score =  494 bits (1271), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 246/321 (76%), Positives = 280/321 (87%), Gaps = 1/321 (0%)

Query: 1   MEKALHRQRILLQHLQPSSSQTSDSPA-ISASICSAGEAAGYHRKPAFDDDVVIVAAYRT 59
           MEKA+ RQR+LL+HL+PSSS + +  A +SAS C AG++A Y R   + DDVVIVAA+RT
Sbjct: 1   MEKAIERQRVLLEHLRPSSSSSHNYEASLSASACLAGDSAAYQRTSLYGDDVVIVAAHRT 60

Query: 60  AICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAA 119
            +CK+KRG FKDT  DDLLAPVL+A+IEKT LNPSEVGDIVVGTVLAPGS RA ECRMAA
Sbjct: 61  PLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAA 120

Query: 120 FYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVN 179
           FYAGFPETV +RTVNRQCSSGLQAVADVA AIKAG YDIGI AGLESMT N ++  G VN
Sbjct: 121 FYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVN 180

Query: 180 PKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIP 239
           P V+ F QA++CLLPMG+TSENVAQRFGV+RQEQD AAV+SHR+AAAATA+GKFKDEIIP
Sbjct: 181 PAVKKFAQAQNCLLPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIP 240

Query: 240 VNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGA 299
           V TK+VDPKTG EK +T+SVDDGIRP TT+A L KLKP FKKDGTTTAGN+SQVSDGAGA
Sbjct: 241 VKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKKDGTTTAGNSSQVSDGAGA 300

Query: 300 VLLMKRSLAVQKGLPILGVFR 320
           VLLMKRS+A+QKGLP+LGVFR
Sbjct: 301 VLLMKRSVAMQKGLPVLGVFR 321
Involved in long chain fatty-acid beta-oxidation prior to gluconeogenesis during germination and subsequent seedling growth. Confers sensitivity to 2,4-dichlorophenoxybutiric acid (2,4-DB). Required for local and systemic induction of jasmonic acid (JA) biosynthesis after wounding. Seems to be involved in JA biosynthesis during senescence.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 1EC: 6
>sp|Q8LF48|THIK1_ARATH 3-ketoacyl-CoA thiolase 1, peroxisomal OS=Arabidopsis thaliana GN=KAT1 PE=1 SV=2 Back     alignment and function description
>sp|Q570C8|THIK5_ARATH 3-ketoacyl-CoA thiolase 5, peroxisomal OS=Arabidopsis thaliana GN=KAT5 PE=2 SV=2 Back     alignment and function description
>sp|P07871|THIKB_RAT 3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus GN=Acaa1b PE=2 SV=2 Back     alignment and function description
>sp|Q921H8|THIKA_MOUSE 3-ketoacyl-CoA thiolase A, peroxisomal OS=Mus musculus GN=Acaa1a PE=2 SV=1 Back     alignment and function description
>sp|Q8VCH0|THIKB_MOUSE 3-ketoacyl-CoA thiolase B, peroxisomal OS=Mus musculus GN=Acaa1b PE=2 SV=1 Back     alignment and function description
>sp|P21775|THIKA_RAT 3-ketoacyl-CoA thiolase A, peroxisomal OS=Rattus norvegicus GN=Acaa1a PE=2 SV=2 Back     alignment and function description
>sp|P09110|THIK_HUMAN 3-ketoacyl-CoA thiolase, peroxisomal OS=Homo sapiens GN=ACAA1 PE=1 SV=2 Back     alignment and function description
>sp|Q05493|THIK_YARLI 3-ketoacyl-CoA thiolase, peroxisomal OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=POT1 PE=3 SV=1 Back     alignment and function description
>sp|P33291|THIKB_CANTR 3-ketoacyl-CoA thiolase B, peroxisomal OS=Candida tropicalis PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query320
442569925 464 3-ketoacyl-CoA thiolase 1 [Rehmannia glu 1.0 0.689 0.801 1e-147
440808089 464 3-ketoacyl-CoA thiolase 2 [Rehmannia glu 1.0 0.689 0.801 1e-147
224064818 457 predicted protein [Populus trichocarpa] 0.987 0.691 0.8 1e-146
225433424 461 PREDICTED: 3-ketoacyl-CoA thiolase 2, pe 1.0 0.694 0.8 1e-145
147866537 461 hypothetical protein VITISV_023191 [Viti 1.0 0.694 0.8 1e-144
326493512401 predicted protein [Hordeum vulgare subsp 1.0 0.798 0.775 1e-144
257815407 462 3-ketoacyl CoA thiolase 1 [Petunia x hyb 1.0 0.692 0.800 1e-144
449432452 462 PREDICTED: 3-ketoacyl-CoA thiolase 2, pe 1.0 0.692 0.781 1e-144
356575164 461 PREDICTED: 3-ketoacyl-CoA thiolase 2, pe 1.0 0.694 0.785 1e-143
7433647 461 acetyl-CoA C-acyltransferase (EC 2.3.1.1 1.0 0.694 0.787 1e-142
>gi|442569925|gb|AGC59769.1| 3-ketoacyl-CoA thiolase 1 [Rehmannia glutinosa] Back     alignment and taxonomy information
 Score =  526 bits (1355), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 259/323 (80%), Positives = 286/323 (88%), Gaps = 3/323 (0%)

Query: 1   MEKALHRQRILLQHLQPS--SSQTSD-SPAISASICSAGEAAGYHRKPAFDDDVVIVAAY 57
           MEKA  RQR+LLQHL+PS  SS   D   ++SASICSAG++A YHR   F DDVVIVAAY
Sbjct: 1   MEKATERQRVLLQHLRPSFTSSSLEDIESSVSASICSAGDSAAYHRSSVFGDDVVIVAAY 60

Query: 58  RTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRM 117
           RTA+CK+KRGGFKDT  DDLLAPVL+AV+EKT +NP+EVGDIVVGTVLAPGS RA ECRM
Sbjct: 61  RTALCKSKRGGFKDTYPDDLLAPVLRAVVEKTNVNPNEVGDIVVGTVLAPGSQRASECRM 120

Query: 118 AAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ 177
           AAFYAGFPETVP+RTVNRQCSSGLQAVADVA AIKAG YDIGI AGLESMTVN ++  G 
Sbjct: 121 AAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGS 180

Query: 178 VNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEI 237
           VNP+V+   QA+DCLLPMGITSENVA RFGVTRQEQD AAV+SHR+AAAATASGKFKDEI
Sbjct: 181 VNPRVKSMAQAQDCLLPMGITSENVAHRFGVTRQEQDQAAVDSHRKAAAATASGKFKDEI 240

Query: 238 IPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGA 297
           IPV TKIVDPK+G EK VTISVDDGIRPNT++ADL KLKP FKKDG+TTAGN+SQVSDGA
Sbjct: 241 IPVKTKIVDPKSGDEKPVTISVDDGIRPNTSVADLGKLKPVFKKDGSTTAGNSSQVSDGA 300

Query: 298 GAVLLMKRSLAVQKGLPILGVFR 320
           GAVLLMKRS+A+QKGLPILGVFR
Sbjct: 301 GAVLLMKRSVAMQKGLPILGVFR 323

Source: Rehmannia glutinosa

Species: Rehmannia glutinosa

Genus: Rehmannia

Family:

Order: Lamiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|440808089|gb|AGC24176.1| 3-ketoacyl-CoA thiolase 2 [Rehmannia glutinosa] Back     alignment and taxonomy information
>gi|224064818|ref|XP_002301570.1| predicted protein [Populus trichocarpa] gi|222843296|gb|EEE80843.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225433424|ref|XP_002285653.1| PREDICTED: 3-ketoacyl-CoA thiolase 2, peroxisomal isoform 1 [Vitis vinifera] gi|297741919|emb|CBI33354.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147866537|emb|CAN81585.1| hypothetical protein VITISV_023191 [Vitis vinifera] Back     alignment and taxonomy information
>gi|326493512|dbj|BAJ85217.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326515882|dbj|BAJ87964.1| predicted protein [Hordeum vulgare subsp. vulgare] Back     alignment and taxonomy information
>gi|257815407|gb|ACV70032.1| 3-ketoacyl CoA thiolase 1 [Petunia x hybrida] Back     alignment and taxonomy information
>gi|449432452|ref|XP_004134013.1| PREDICTED: 3-ketoacyl-CoA thiolase 2, peroxisomal-like [Cucumis sativus] gi|449487514|ref|XP_004157664.1| PREDICTED: 3-ketoacyl-CoA thiolase 2, peroxisomal-like [Cucumis sativus] gi|393707|emb|CAA47926.1| 3-ketoacyl-CoA thiolase [Cucumis sativus] Back     alignment and taxonomy information
>gi|356575164|ref|XP_003555712.1| PREDICTED: 3-ketoacyl-CoA thiolase 2, peroxisomal-like [Glycine max] Back     alignment and taxonomy information
>gi|7433647|pir||S72532 acetyl-CoA C-acyltransferase (EC 2.3.1.16) precursor - cucurbit gi|1694621|dbj|BAA11117.1| 3-ketoacyl-CoA thiolase [Cucurbita cv. Kurokawa Amakuri] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query320
TAIR|locus:2046565 462 PKT3 "peroxisomal 3-ketoacyl-C 1.0 0.692 0.707 8.2e-115
TAIR|locus:2197778 443 PKT4 "peroxisomal 3-ketoacyl-C 0.978 0.706 0.687 1.9e-108
TAIR|locus:2156514 457 KAT5 "3-KETO-ACYL-COENZYME A T 0.990 0.693 0.636 1.3e-102
RGD|1562373 424 Acaa1b "acetyl-Coenzyme A acyl 0.918 0.693 0.523 1.7e-73
UNIPROTKB|F1RRB7 426 ACAA1 "Uncharacterized protein 0.909 0.683 0.516 4.6e-73
MGI|MGI:2148491 424 Acaa1a "acetyl-Coenzyme A acyl 0.915 0.691 0.518 9.6e-73
UNIPROTKB|P09110 424 ACAA1 "3-ketoacyl-CoA thiolase 0.840 0.634 0.546 1.6e-72
UNIPROTKB|E2REH5 426 ACAA1 "Uncharacterized protein 0.921 0.692 0.516 2e-72
UNIPROTKB|F1NB64 425 ACAA1 "Uncharacterized protein 0.843 0.635 0.540 2.5e-72
MGI|MGI:3605455 424 Acaa1b "acetyl-Coenzyme A acyl 0.918 0.693 0.519 2.5e-72
TAIR|locus:2046565 PKT3 "peroxisomal 3-ketoacyl-CoA thiolase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1132 (403.5 bits), Expect = 8.2e-115, P = 8.2e-115
 Identities = 227/321 (70%), Positives = 254/321 (79%)

Query:     1 MEKAXXXXXXXXXXXXPSSSQTSDSPA-ISASICSAGEAAGYHRKPAFDDDVVIVAAYRT 59
             MEKA            PSSS + +  A +SAS C AG++A Y R   + DDVVIVAA+RT
Sbjct:     1 MEKAIERQRVLLEHLRPSSSSSHNYEASLSASACLAGDSAAYQRTSLYGDDVVIVAAHRT 60

Query:    60 AICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAA 119
              +CK+KRG FKDT  DDLLAPVL+A+IEKT LNPSEVGDIVVGTVLAPGS RA ECRMAA
Sbjct:    61 PLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAA 120

Query:   120 FYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVN 179
             FYAGFPETV +RTVNRQCSSGLQAVADVA AIKAG YDIGI AGLESMT N ++  G VN
Sbjct:   121 FYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVN 180

Query:   180 PKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIP 239
             P V+ F QA++CLLPMG+TSENVAQRFGV+RQEQD                GKFKDEIIP
Sbjct:   181 PAVKKFAQAQNCLLPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIP 240

Query:   240 VNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGA 299
             V TK+VDPKTG EK +T+SVDDGIRP TT+A L KLKP FKKDGTTTAGN+SQVSDGAGA
Sbjct:   241 VKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKKDGTTTAGNSSQVSDGAGA 300

Query:   300 VLLMKRSLAVQKGLPILGVFR 320
             VLLMKRS+A+QKGLP+LGVFR
Sbjct:   301 VLLMKRSVAMQKGLPVLGVFR 321
GO:0003824 "catalytic activity" evidence=IEA
GO:0008152 "metabolic process" evidence=IEA
GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA
GO:0019395 "fatty acid oxidation" evidence=TAS
GO:0003988 "acetyl-CoA C-acyltransferase activity" evidence=ISS;IMP;IDA
GO:0009611 "response to wounding" evidence=NAS
GO:0009695 "jasmonic acid biosynthetic process" evidence=NAS
GO:0005739 "mitochondrion" evidence=IDA
GO:0009507 "chloroplast" evidence=IDA
GO:0005730 "nucleolus" evidence=IDA
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0016020 "membrane" evidence=IDA
GO:0005777 "peroxisome" evidence=IDA
GO:0005829 "cytosol" evidence=RCA
GO:0009789 "positive regulation of abscisic acid mediated signaling pathway" evidence=IMP
GO:0006635 "fatty acid beta-oxidation" evidence=RCA;TAS
GO:0009407 "toxin catabolic process" evidence=RCA
GO:0043161 "proteasomal ubiquitin-dependent protein catabolic process" evidence=RCA
GO:0051788 "response to misfolded protein" evidence=RCA
GO:0080129 "proteasome core complex assembly" evidence=RCA
GO:0010111 "glyoxysome organization" evidence=IMP
TAIR|locus:2197778 PKT4 "peroxisomal 3-ketoacyl-CoA thiolase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2156514 KAT5 "3-KETO-ACYL-COENZYME A THIOLASE 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
RGD|1562373 Acaa1b "acetyl-Coenzyme A acyltransferase 1B" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1RRB7 ACAA1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:2148491 Acaa1a "acetyl-Coenzyme A acyltransferase 1A" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|P09110 ACAA1 "3-ketoacyl-CoA thiolase, peroxisomal" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E2REH5 ACAA1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1NB64 ACAA1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
MGI|MGI:3605455 Acaa1b "acetyl-Coenzyme A acyltransferase 1B" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P09110THIK_HUMAN2, ., 3, ., 1, ., 1, 60.50630.95310.7193yesno
Q8VCH0THIKB_MOUSE2, ., 3, ., 1, ., 1, 60.52840.95310.7193yesno
Q05493THIK_YARLI2, ., 3, ., 1, ., 1, 60.52720.83120.6425yesno
Q921H8THIKA_MOUSE2, ., 3, ., 1, ., 1, 60.52680.950.7169yesno
P07871THIKB_RAT2, ., 3, ., 1, ., 1, 60.53160.95310.7193yesno
Q56WD9THIK2_ARATH2, ., 3, ., 1, ., 1, 60.76631.00.6926yesno
P21775THIKA_RAT2, ., 3, ., 1, ., 1, 60.52210.95310.7193yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.3.10.963
3rd Layer2.3.1.160.946

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query320
PLN02287 452 PLN02287, PLN02287, 3-ketoacyl-CoA thiolase 0.0
cd00751 386 cd00751, thiolase, Thiolase are ubiquitous enzymes 1e-106
TIGR01930 386 TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltrans 5e-97
pfam00108262 pfam00108, Thiolase_N, Thiolase, N-terminal domain 3e-96
PRK05790 393 PRK05790, PRK05790, putative acyltransferase; Prov 4e-83
PRK09052 399 PRK09052, PRK09052, acetyl-CoA acetyltransferase; 2e-75
PRK07661 391 PRK07661, PRK07661, acetyl-CoA acetyltransferase; 5e-74
PRK09051 394 PRK09051, PRK09051, beta-ketothiolase; Provisional 1e-66
PRK07108 392 PRK07108, PRK07108, acetyl-CoA acetyltransferase; 2e-65
COG0183 392 COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid 6e-64
PRK08947 387 PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed 1e-60
PRK05656 393 PRK05656, PRK05656, acetyl-CoA acetyltransferase; 3e-56
PRK06445 394 PRK06445, PRK06445, acetyl-CoA acetyltransferase; 9e-55
PRK06205 404 PRK06205, PRK06205, acetyl-CoA acetyltransferase; 4e-51
TIGR02445 385 TIGR02445, fadA, fatty oxidation complex, beta sub 9e-51
PRK09050 401 PRK09050, PRK09050, beta-ketoadipyl CoA thiolase; 2e-50
TIGR02430 400 TIGR02430, pcaF, 3-oxoadipyl-CoA thiolase 5e-50
PLN02644 394 PLN02644, PLN02644, acetyl-CoA C-acetyltransferase 6e-48
PRK07851 406 PRK07851, PRK07851, acetyl-CoA acetyltransferase; 6e-48
PRK08235 393 PRK08235, PRK08235, acetyl-CoA acetyltransferase; 8e-48
PRK08963 428 PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed 8e-47
PRK06366 388 PRK06366, PRK06366, acetyl-CoA acetyltransferase; 4e-43
PRK06633 392 PRK06633, PRK06633, acetyl-CoA acetyltransferase; 5e-43
PRK07850 387 PRK07850, PRK07850, acetyl-CoA acetyltransferase; 1e-42
PRK13359 400 PRK13359, PRK13359, beta-ketoadipyl CoA thiolase; 2e-42
PRK07801 382 PRK07801, PRK07801, acetyl-CoA acetyltransferase; 4e-40
PRK06504 390 PRK06504, PRK06504, acetyl-CoA acetyltransferase; 5e-40
PRK06954 397 PRK06954, PRK06954, acetyl-CoA acetyltransferase; 6e-40
PRK06690 361 PRK06690, PRK06690, acetyl-CoA acetyltransferase; 4e-39
PRK08170 426 PRK08170, PRK08170, acetyl-CoA acetyltransferase; 7e-39
PRK08242 402 PRK08242, PRK08242, acetyl-CoA acetyltransferase; 4e-38
PRK08131 401 PRK08131, PRK08131, acetyl-CoA acetyltransferase; 1e-37
PRK09268 427 PRK09268, PRK09268, acetyl-CoA acetyltransferase; 1e-32
TIGR02446 430 TIGR02446, FadI, fatty oxidation complex, beta sub 1e-31
PRK06025 417 PRK06025, PRK06025, acetyl-CoA acetyltransferase; 1e-29
cd00826 393 cd00826, nondecarbox_cond_enzymes, nondecarboxylat 1e-24
cd00829 375 cd00829, SCP-x_thiolase, Thiolase domain associate 3e-07
PRK12578 385 PRK12578, PRK12578, acetyl-CoA acetyltransferase; 1e-06
PRK06064 389 PRK06064, PRK06064, acetyl-CoA acetyltransferase; 2e-05
cd00327254 cd00327, cond_enzymes, Condensing enzymes; Family 4e-04
>gnl|CDD|215161 PLN02287, PLN02287, 3-ketoacyl-CoA thiolase Back     alignment and domain information 
 Score =  577 bits (1489), Expect = 0.0
 Identities = 260/320 (81%), Positives = 290/320 (90%), Gaps = 3/320 (0%)

Query: 1   MEKALHRQRILLQHLQPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTA 60
           MEKA++RQR+LL+HL+PSSS   +  ++SAS C+AG++A YHR  AF DDVVIVAAYRT 
Sbjct: 1   MEKAINRQRVLLRHLRPSSS---EPSSLSASACAAGDSAAYHRTTAFGDDVVIVAAYRTP 57

Query: 61  ICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAF 120
           ICKAKRGGFKDT  DDLLAPVLKAV+EKT LNPSEVGDIVVGTVLAPGS RA ECRMAAF
Sbjct: 58  ICKAKRGGFKDTYPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAF 117

Query: 121 YAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNP 180
           YAGFPETVP+RTVNRQCSSGLQAVADVA AIKAG YDIGI AG+ESMT N ++  G VNP
Sbjct: 118 YAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGVESMTTNPMAWEGGVNP 177

Query: 181 KVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPV 240
           +VE F+QA+DCLLPMGITSENVA+RFGVTR+EQD AAVESHR+AAAATASGKFKDEI+PV
Sbjct: 178 RVESFSQAQDCLLPMGITSENVAERFGVTREEQDQAAVESHRKAAAATASGKFKDEIVPV 237

Query: 241 NTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAV 300
           +TKIVDPKTG EK + ISVDDGIRPNTT+ADLAKLKP FKK+GTTTAGN+SQVSDGAGAV
Sbjct: 238 HTKIVDPKTGEEKPIVISVDDGIRPNTTLADLAKLKPVFKKNGTTTAGNSSQVSDGAGAV 297

Query: 301 LLMKRSLAVQKGLPILGVFR 320
           LLMKRS+A+QKGLPILGVFR
Sbjct: 298 LLMKRSVAMQKGLPILGVFR 317

Length = 452
>gnl|CDD|238383 cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine Back     alignment and domain information
>gnl|CDD|233642 TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltransferases Back     alignment and domain information
>gnl|CDD|215722 pfam00108, Thiolase_N, Thiolase, N-terminal domain Back     alignment and domain information
>gnl|CDD|180261 PRK05790, PRK05790, putative acyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|181626 PRK09052, PRK09052, acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|181072 PRK07661, PRK07661, acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|181625 PRK09051, PRK09051, beta-ketothiolase; Provisional Back     alignment and domain information
>gnl|CDD|180843 PRK07108, PRK07108, acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|223261 COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|181592 PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed Back     alignment and domain information
>gnl|CDD|168156 PRK05656, PRK05656, acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|180563 PRK06445, PRK06445, acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|235741 PRK06205, PRK06205, acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|131498 TIGR02445, fadA, fatty oxidation complex, beta subunit FadA Back     alignment and domain information
>gnl|CDD|181624 PRK09050, PRK09050, beta-ketoadipyl CoA thiolase; Validated Back     alignment and domain information
>gnl|CDD|131483 TIGR02430, pcaF, 3-oxoadipyl-CoA thiolase Back     alignment and domain information
>gnl|CDD|215347 PLN02644, PLN02644, acetyl-CoA C-acetyltransferase Back     alignment and domain information
>gnl|CDD|181146 PRK07851, PRK07851, acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|181311 PRK08235, PRK08235, acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|181597 PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed Back     alignment and domain information
>gnl|CDD|102340 PRK06366, PRK06366, acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|168632 PRK06633, PRK06633, acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|181145 PRK07850, PRK07850, acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|183998 PRK13359, PRK13359, beta-ketoadipyl CoA thiolase; Provisional Back     alignment and domain information
>gnl|CDD|181123 PRK07801, PRK07801, acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|180595 PRK06504, PRK06504, acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|180775 PRK06954, PRK06954, acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|180659 PRK06690, PRK06690, acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|181265 PRK08170, PRK08170, acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|236197 PRK08242, PRK08242, acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>gnl|CDD|181242 PRK08131, PRK08131, acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|236440 PRK09268, PRK09268, acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|131499 TIGR02446, FadI, fatty oxidation complex, beta subunit FadI Back     alignment and domain information
>gnl|CDD|235675 PRK06025, PRK06025, acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|238422 cd00826, nondecarbox_cond_enzymes, nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine Back     alignment and domain information
>gnl|CDD|238425 cd00829, SCP-x_thiolase, Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism Back     alignment and domain information
>gnl|CDD|183606 PRK12578, PRK12578, acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|235688 PRK06064, PRK06064, acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 320
PLN02287 452 3-ketoacyl-CoA thiolase 100.0
PF00108264 Thiolase_N: Thiolase, N-terminal domain; InterPro: 100.0
PRK07850 387 acetyl-CoA acetyltransferase; Provisional 100.0
PRK06504 390 acetyl-CoA acetyltransferase; Provisional 100.0
PRK08235 393 acetyl-CoA acetyltransferase; Provisional 100.0
PRK09052 399 acetyl-CoA acetyltransferase; Provisional 100.0
PRK09051 394 beta-ketothiolase; Provisional 100.0
PRK08242 402 acetyl-CoA acetyltransferase; Validated 100.0
PRK06366 388 acetyl-CoA acetyltransferase; Provisional 100.0
PRK13359 400 beta-ketoadipyl CoA thiolase; Provisional 100.0
PRK08963 428 fadI 3-ketoacyl-CoA thiolase; Reviewed 100.0
TIGR02446 430 FadI fatty oxidation complex, beta subunit FadI. T 100.0
PRK09050 401 beta-ketoadipyl CoA thiolase; Validated 100.0
PRK06633 392 acetyl-CoA acetyltransferase; Provisional 100.0
PRK08947 387 fadA 3-ketoacyl-CoA thiolase; Reviewed 100.0
PRK07661 391 acetyl-CoA acetyltransferase; Provisional 100.0
TIGR02445 385 fadA fatty oxidation complex, beta subunit FadA. T 100.0
PRK06205 404 acetyl-CoA acetyltransferase; Provisional 100.0
PRK06025 417 acetyl-CoA acetyltransferase; Provisional 100.0
PRK08131 401 acetyl-CoA acetyltransferase; Provisional 100.0
TIGR02430 400 pcaF beta-ketoadipyl CoA thiolase. Members of this 100.0
PRK05656 393 acetyl-CoA acetyltransferase; Provisional 100.0
KOG1389 435 consensus 3-oxoacyl CoA thiolase [Lipid transport 100.0
PRK07108 392 acetyl-CoA acetyltransferase; Provisional 100.0
PRK08170 426 acetyl-CoA acetyltransferase; Provisional 100.0
PRK06445 394 acetyl-CoA acetyltransferase; Provisional 100.0
PRK06954 397 acetyl-CoA acetyltransferase; Provisional 100.0
PRK09268 427 acetyl-CoA acetyltransferase; Provisional 100.0
PRK05790 393 putative acyltransferase; Provisional 100.0
cd00751 386 thiolase Thiolase are ubiquitous enzymes that cata 100.0
KOG1390 396 consensus Acetyl-CoA acetyltransferase [Lipid tran 100.0
KOG1391 396 consensus Acetyl-CoA acetyltransferase [Lipid tran 100.0
PRK07801 382 acetyl-CoA acetyltransferase; Provisional 100.0
PRK06690 361 acetyl-CoA acetyltransferase; Provisional 100.0
TIGR01930 386 AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi 100.0
PRK07851 406 acetyl-CoA acetyltransferase; Provisional 100.0
PLN02644 394 acetyl-CoA C-acetyltransferase 100.0
PRK06157 398 acetyl-CoA acetyltransferase; Validated 100.0
PRK06365 430 acetyl-CoA acetyltransferase; Provisional 100.0
PRK06066 385 acetyl-CoA acetyltransferase; Provisional 100.0
COG0183 392 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis 100.0
PRK06065 392 acetyl-CoA acetyltransferase; Provisional 100.0
PRK12578 385 acetyl-CoA acetyltransferase; Provisional 100.0
PRK08313 386 acetyl-CoA acetyltransferase; Provisional 100.0
PRK08256 391 lipid-transfer protein; Provisional 100.0
PRK06059 399 lipid-transfer protein; Provisional 100.0
PRK06064 389 acetyl-CoA acetyltransferase; Provisional 100.0
PRK06158 384 thiolase; Provisional 100.0
PRK06289 403 acetyl-CoA acetyltransferase; Provisional 100.0
PTZ00455 438 3-ketoacyl-CoA thiolase; Provisional 100.0
PRK07855 386 lipid-transfer protein; Provisional 100.0
PRK08142 388 acetyl-CoA acetyltransferase; Provisional 100.0
PRK07937 352 lipid-transfer protein; Provisional 100.0
cd00829 375 SCP-x_thiolase Thiolase domain associated with ste 100.0
PRK07516 389 acetyl-CoA acetyltransferase; Provisional 100.0
cd00826 393 nondecarbox_cond_enzymes nondecarboxylating conden 100.0
PRK08257 498 acetyl-CoA acetyltransferase; Validated 100.0
KOG1392 465 consensus Acetyl-CoA acetyltransferase [Lipid tran 99.97
KOG1406 408 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44 99.97
cd00825332 decarbox_cond_enzymes decarboxylating condensing e 99.52
cd00327254 cond_enzymes Condensing enzymes; Family of enzymes 99.52
COG0332323 FabH 3-oxoacyl-[acyl-carrier-protein] 99.51
PRK07314411 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.45
TIGR03150407 fabF beta-ketoacyl-acyl-carrier-protein synthase I 99.44
PRK09352319 3-oxoacyl-(acyl carrier protein) synthase III; Rev 99.35
smart00825424 PKS_KS Beta-ketoacyl synthase. The structure of be 99.35
CHL00203326 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr 99.35
PLN02836437 3-oxoacyl-[acyl-carrier-protein] synthase 99.34
PRK06333424 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.32
cd00827324 init_cond_enzymes "initiating" condensing enzymes 99.31
cd00828407 elong_cond_enzymes "elongating" condensing enzymes 99.29
TIGR00747318 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III 99.29
PTZ00050421 3-oxoacyl-acyl carrier protein synthase; Provision 99.29
PRK09258338 3-oxoacyl-(acyl carrier protein) synthase III; Rev 99.27
TIGR00748345 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase 99.25
PRK08722414 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.23
PLN02326379 3-oxoacyl-[acyl-carrier-protein] synthase III 99.22
PRK12879325 3-oxoacyl-(acyl carrier protein) synthase III; Rev 99.22
cd00834406 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) 99.22
cd00830320 KAS_III Ketoacyl-acyl carrier protein synthase III 99.21
cd00833421 PKS polyketide synthases (PKSs) polymerize simple 99.21
PRK06816378 3-oxoacyl-(acyl carrier protein) synthase III; Rev 99.21
PRK14691342 3-oxoacyl-(acyl carrier protein) synthase II; Prov 99.21
TIGR02845327 spore_V_AD stage V sporulation protein AD. Bacillu 99.19
PRK07204329 3-oxoacyl-(acyl carrier protein) synthase III; Rev 99.18
PRK04262347 hypothetical protein; Provisional 99.18
PRK07515372 3-oxoacyl-(acyl carrier protein) synthase III; Rev 99.15
PRK12880353 3-oxoacyl-(acyl carrier protein) synthase III; Rev 99.14
PRK08304337 stage V sporulation protein AD; Validated 99.13
PRK07103410 polyketide beta-ketoacyl:acyl carrier protein synt 99.12
PRK06840339 hypothetical protein; Validated 99.07
PRK05952381 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.07
PLN02787540 3-oxoacyl-[acyl-carrier-protein] synthase II 99.05
PRK05963326 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.04
PRK07910418 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.01
cd00831361 CHS_like Chalcone and stilbene synthases; plant-sp 99.0
PRK12404334 stage V sporulation protein AD; Provisional 99.0
TIGR01835379 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt 99.0
PLN03168389 chalcone synthase; Provisional 98.98
PRK06501425 3-oxoacyl-(acyl carrier protein) synthase II; Revi 98.96
PLN02932478 3-ketoacyl-CoA synthase 98.94
PLN03169391 chalcone synthase family protein; Provisional 98.87
PRK06519398 3-oxoacyl-(acyl carrier protein) synthase II; Revi 98.86
PRK08439406 3-oxoacyl-(acyl carrier protein) synthase II; Revi 98.85
PF00109254 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal 98.85
PLN03172393 chalcone synthase family protein; Provisional 98.84
PLN03171399 chalcone synthase-like protein; Provisional 98.84
PLN03170401 chalcone synthase; Provisional 98.83
PLN02377502 3-ketoacyl-CoA synthase 98.83
PLN02577 459 hydroxymethylglutaryl-CoA synthase 98.82
PRK07967406 3-oxoacyl-(acyl carrier protein) synthase I; Revie 98.82
PLN03173391 chalcone synthase; Provisional 98.82
PLN02192511 3-ketoacyl-CoA synthase 98.81
PRK06147348 3-oxoacyl-(acyl carrier protein) synthase; Validat 98.79
TIGR01833 454 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth 98.73
PRK09116405 3-oxoacyl-(acyl carrier protein) synthase II; Revi 98.7
PLN02854521 3-ketoacyl-CoA synthase 98.68
cd00832399 CLF Chain-length factor (CLF) is a factor required 98.64
COG0304412 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li 98.57
PLN00415466 3-ketoacyl-CoA synthase 98.55
COG3321 1061 Polyketide synthase modules and related proteins [ 98.53
KOG1394440 consensus 3-oxoacyl-(acyl-carrier-protein) synthas 98.51
TIGR02813 2582 omega_3_PfaA polyketide-type polyunsaturated fatty 98.45
COG3425377 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi 98.4
PF08392290 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- 98.32
PF00195226 Chal_sti_synt_N: Chalcone and stilbene synthases, 98.27
PF01154174 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s 98.07
PRK09185392 3-oxoacyl-(acyl carrier protein) synthase I; Revie 98.05
COG3424356 BcsA Predicted naringenin-chalcone synthase [Secon 97.85
KOG1202 2376 consensus Animal-type fatty acid synthase and rela 97.72
PF07451329 SpoVAD: Stage V sporulation protein AD (SpoVAD); I 97.43
PF0854580 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP) 97.11
COG0183 392 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis 96.48
PF13723218 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina 94.51
PRK08257498 acetyl-CoA acetyltransferase; Validated 90.66
cd00829375 SCP-x_thiolase Thiolase domain associated with ste 88.07
PF0854190 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC 87.26
PRK06816378 3-oxoacyl-(acyl carrier protein) synthase III; Rev 86.96
KOG1393 462 consensus Hydroxymethylglutaryl-CoA synthase [Lipi 85.93
PRK05963326 3-oxoacyl-(acyl carrier protein) synthase II; Revi 85.89
PRK07204329 3-oxoacyl-(acyl carrier protein) synthase III; Rev 85.57
TIGR00748345 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase 84.76
PRK06064389 acetyl-CoA acetyltransferase; Provisional 84.39
PTZ00455438 3-ketoacyl-CoA thiolase; Provisional 83.83
cd00825332 decarbox_cond_enzymes decarboxylating condensing e 82.7
PRK09258338 3-oxoacyl-(acyl carrier protein) synthase III; Rev 81.73
PLN02326379 3-oxoacyl-[acyl-carrier-protein] synthase III 81.33
PRK09050401 beta-ketoadipyl CoA thiolase; Validated 80.47
COG1214220 Inactive homolog of metal-dependent proteases, put 80.06
>PLN02287 3-ketoacyl-CoA thiolase Back     alignment and domain information 
Probab=100.00  E-value=4.6e-62  Score=481.18  Aligned_cols=317  Identities=82%  Similarity=1.207  Sum_probs=270.6

Q ss_pred             ChHHhHHHHHHHhccCCCCCCCCCCccccccccccccccccCCCCCCCCceEEEecccccccccCCCCCCCCCHHHHHHH
Q 020887            1 MEKALHRQRILLQHLQPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAP   80 (320)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~   80 (320)
                      |||++.|||.||.||.||||..|   .+|+|.|.+|..+.||+-..+.++|||||+++|||+++++|.+.+.++.+|+.+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~V~IVG~grTpfgk~~~g~~~~~s~~eLa~e   77 (452)
T PLN02287          1 MEKAINRQRVLLRHLRPSSSEPS---SLSASACAAGDSAAYHRTTAFGDDVVIVAAYRTPICKAKRGGFKDTYPDDLLAP   77 (452)
T ss_pred             CchHHHHHHHHHhhccCCCCCcc---ccccccccccchhhhccccCCCCCEEEEEeecCCCccCCCCCcCCCCHHHHHHH
Confidence            89999999999999999998776   478999999999999999999999999999999999843566678999999999


Q ss_pred             HHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEE
Q 020887           81 VLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGI  160 (320)
Q Consensus        81 A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvL  160 (320)
                      |+++||+|+||+++|||.+++|+..+...+..+.++.++..+|++...|+++|+++|+||..++..|+++|++|.+|+||
T Consensus        78 A~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~pa~~V~~~CaSG~~Ai~~Aa~~I~sG~~dvvL  157 (452)
T PLN02287         78 VLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGI  157 (452)
T ss_pred             HHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCcceEEEeccCchHHHHHHHHHHHHHcCCCCeEE
Confidence            99999999999999999999998866544344567888899999756899999999999999999999999999999999


Q ss_pred             EEeecccccccccccCccChhhhhhhccccCCCchHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeee
Q 020887          161 AAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPV  240 (320)
Q Consensus       161 v~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~A~~~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv  240 (320)
                      |+|+|+|+..|+.+.....+.+..+.........|++++++||++||+|||++|+||++||+||++||++|+|+++|+||
T Consensus       158 v~GvE~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~y~~~yGitrE~la~vAvksh~nAa~np~ag~f~~ei~pv  237 (452)
T PLN02287        158 GAGVESMTTNPMAWEGGVNPRVESFSQAQDCLLPMGITSENVAERFGVTREEQDQAAVESHRKAAAATASGKFKDEIVPV  237 (452)
T ss_pred             EEeEEecCCCchhhccccCchhhccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeee
Confidence            99999999887533222222111111001112459999999999999999999999999999999999999999999999


Q ss_pred             eecccCCCCCccceEEEeccCCCCCCCCHHHHhcCCCcccCCCcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887          241 NTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR  320 (320)
Q Consensus       241 ~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~~~~~i~~~~gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~  320 (320)
                      +++..++..+..++++++.||++|.++++|++.++||+|+|+||||++|||+++|||+|+||+|+|+|++++.+|+++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~De~~r~~~~~e~l~~l~~v~~~~g~lt~~~~s~~sDGAaalvl~see~A~~~~~~~~a~~~  317 (452)
T PLN02287        238 HTKIVDPKTGEEKPIVISVDDGIRPNTTLADLAKLKPVFKKNGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPILGVFR  317 (452)
T ss_pred             eccccccccCCccceeecccCCCCCCCCHHHHhcCCCccCCCCCEeccccCCcCCceEEEEEeeHHHHHHCCCCeEEEEE
Confidence            87532111011112578999999999999999999999988899999999999999999999999999999999988863

>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 Back     alignment and domain information
>PRK07850 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06504 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08235 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK09052 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK09051 beta-ketothiolase; Provisional Back     alignment and domain information
>PRK08242 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>PRK06366 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional Back     alignment and domain information
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed Back     alignment and domain information
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI Back     alignment and domain information
>PRK09050 beta-ketoadipyl CoA thiolase; Validated Back     alignment and domain information
>PRK06633 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed Back     alignment and domain information
>PRK07661 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA Back     alignment and domain information
>PRK06205 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06025 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08131 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase Back     alignment and domain information
>PRK05656 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism] Back     alignment and domain information
>PRK07108 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08170 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06445 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06954 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK09268 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK05790 putative acyltransferase; Provisional Back     alignment and domain information
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine Back     alignment and domain information
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] Back     alignment and domain information
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] Back     alignment and domain information
>PRK07801 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06690 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases Back     alignment and domain information
>PRK07851 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PLN02644 acetyl-CoA C-acetyltransferase Back     alignment and domain information
>PRK06157 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>PRK06365 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06066 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] Back     alignment and domain information
>PRK06065 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK12578 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08313 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08256 lipid-transfer protein; Provisional Back     alignment and domain information
>PRK06059 lipid-transfer protein; Provisional Back     alignment and domain information
>PRK06064 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06158 thiolase; Provisional Back     alignment and domain information
>PRK06289 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional Back     alignment and domain information
>PRK07855 lipid-transfer protein; Provisional Back     alignment and domain information
>PRK08142 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07937 lipid-transfer protein; Provisional Back     alignment and domain information
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism Back     alignment and domain information
>PRK07516 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine Back     alignment and domain information
>PRK08257 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] Back     alignment and domain information
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism] Back     alignment and domain information
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction Back     alignment and domain information
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction Back     alignment and domain information
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] Back     alignment and domain information
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II Back     alignment and domain information
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>smart00825 PKS_KS Beta-ketoacyl synthase Back     alignment and domain information
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional Back     alignment and domain information
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase Back     alignment and domain information
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes Back     alignment and domain information
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases Back     alignment and domain information
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III Back     alignment and domain information
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional Back     alignment and domain information
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative Back     alignment and domain information
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III Back     alignment and domain information
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II Back     alignment and domain information
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems Back     alignment and domain information
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations Back     alignment and domain information
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional Back     alignment and domain information
>TIGR02845 spore_V_AD stage V sporulation protein AD Back     alignment and domain information
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK04262 hypothetical protein; Provisional Back     alignment and domain information
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK08304 stage V sporulation protein AD; Validated Back     alignment and domain information
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated Back     alignment and domain information
>PRK06840 hypothetical protein; Validated Back     alignment and domain information
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II Back     alignment and domain information
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs Back     alignment and domain information
>PRK12404 stage V sporulation protein AD; Provisional Back     alignment and domain information
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade Back     alignment and domain information
>PLN03168 chalcone synthase; Provisional Back     alignment and domain information
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PLN02932 3-ketoacyl-CoA synthase Back     alignment and domain information
>PLN03169 chalcone synthase family protein; Provisional Back     alignment and domain information
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2 Back     alignment and domain information
>PLN03172 chalcone synthase family protein; Provisional Back     alignment and domain information
>PLN03171 chalcone synthase-like protein; Provisional Back     alignment and domain information
>PLN03170 chalcone synthase; Provisional Back     alignment and domain information
>PLN02377 3-ketoacyl-CoA synthase Back     alignment and domain information
>PLN02577 hydroxymethylglutaryl-CoA synthase Back     alignment and domain information
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed Back     alignment and domain information
>PLN03173 chalcone synthase; Provisional Back     alignment and domain information
>PLN02192 3-ketoacyl-CoA synthase Back     alignment and domain information
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated Back     alignment and domain information
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade Back     alignment and domain information
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PLN02854 3-ketoacyl-CoA synthase Back     alignment and domain information
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria Back     alignment and domain information
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PLN00415 3-ketoacyl-CoA synthase Back     alignment and domain information
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA Back     alignment and domain information
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] Back     alignment and domain information
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species Back     alignment and domain information
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 Back     alignment and domain information
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase Back     alignment and domain information
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed Back     alignment and domain information
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] Back     alignment and domain information
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long Back     alignment and domain information
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways Back     alignment and domain information
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] Back     alignment and domain information
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain Back     alignment and domain information
>PRK08257 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism Back     alignment and domain information
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 Back     alignment and domain information
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism] Back     alignment and domain information
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative Back     alignment and domain information
>PRK06064 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional Back     alignment and domain information
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction Back     alignment and domain information
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III Back     alignment and domain information
>PRK09050 beta-ketoadipyl CoA thiolase; Validated Back     alignment and domain information
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query320
2wua_A 440 Structure Of The Peroxisomal 3-Ketoacyl-Coa Thiolas 1e-126
2wu9_A 442 Crystal Structure Of Peroxisomal Kat2 From Arabidop 1e-122
2c7y_A 404 Plant Enzyme Length = 404 1e-121
2iik_A 418 Crystal Structure Of Human Peroxisomal Acetyl-Coa A 6e-79
1afw_A 393 The 1.8 Angstrom Crystal Structure Of The Dimeric P 1e-49
1pxt_A 390 The 2.8 Angstroms Structure Of Peroxisomal 3-Ketoac 1e-49
1m1t_A 392 Biosynthetic Thiolase, Q64a Mutant Length = 392 1e-35
2wku_A 392 Biosynthetic Thiolase From Z. Ramigera. The N316h M 4e-35
2wl6_A 392 Biosynthetic Thiolase From Z. Ramigera. The N316h-H 4e-35
2wkv_A 392 Biosynthetic Thiolase From Z. Ramigera. Complex Of 4e-35
2vu2_A 392 Biosynthetic Thiolase From Z. Ramigera. Complex Wit 4e-35
2wl4_A 392 Biosynthetic Thiolase From Z. Ramigera. Complex Of 4e-35
2wl4_C 392 Biosynthetic Thiolase From Z. Ramigera. Complex Of 4e-35
1dlu_A 389 Unliganded Biosynthetic Thiolase From Zoogloea Rami 4e-35
2wl5_C 392 Biosynthetic Thiolase From Z. Ramigera. Complex Of 4e-35
2wkt_C 392 Biosynthetic Thiolase From Z. Ramigera. Complex Of 5e-35
4e1l_A 395 Crystal Structure Of Acetoacetyl-Coa Thiolase (Thla 2e-34
1ulq_A 401 Crystal Structure Of Tt0182 From Thermus Thermophil 3e-34
3ss6_A 394 Crystal Structure Of The Bacillus Anthracis Acetyl- 5e-34
1wdk_C 390 Fatty Acid Beta-Oxidation Multienzyme Complex From 6e-34
1m1o_A 392 Crystal Structure Of Biosynthetic Thiolase, C89a Mu 6e-34
2wl4_D 392 Biosynthetic Thiolase From Z. Ramigera. Complex Of 9e-34
1m4s_A 392 Biosynthetic Thiolase, Cys89 Acetylated, Unliganded 9e-34
1qfl_A 389 Biosynthetic Thiolase From Zoogloea Ramigera In Com 9e-34
2wl4_B 392 Biosynthetic Thiolase From Z. Ramigera. Complex Of 9e-34
2wl5_A 392 Biosynthetic Thiolase From Z. Ramigera. Complex Of 1e-33
2wkt_A 392 Biosynthetic Thiolase From Z. Ramigera. Complex Of 1e-33
4dd5_A 396 Biosynthetic Thiolase (Thla1) From Clostridium Diff 2e-31
1wl4_A 397 Human Cytosolic Acetoacetyl-Coa Thiolase Complexed 4e-27
3goa_A 387 Crystal Structure Of The Salmonella Typhimurium Fad 3e-25
2ib7_A 395 Crystallographic And Kinetic Studies Of Human Mitoc 2e-21
2ibu_A 395 Crystallographic And Kinetic Studies Of Human Mitoc 4e-20
2f2s_A 406 Human Mitochondrial Acetoacetyl-Coa Thiolase Length 6e-20
3svk_A 407 Crystal Structure Of Acetyl-Coa Acetyltransferase F 2e-17
>pdb|2WUA|A Chain A, Structure Of The Peroxisomal 3-Ketoacyl-Coa Thiolase From Sunflower Length = 440 Back     alignment and structure 
Iteration: 1

 Score =  446 bits (1148), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 218/302 (72%), Positives = 247/302 (81%)
Query: 19  SSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLL 78
           SS +S    +S S+C+AG++A Y R   F DDVVIVAAYR+ +CKAKRGG KDT  DD+L
Sbjct: 3   SSTSSSLENLSVSVCAAGDSAAYQRNSVFGDDVVIVAAYRSPLCKAKRGGLKDTYPDDIL 62
Query: 79  APVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCS 138
           APVLKA+IEKT +NP+EVGDIVVG+VL  GS RA ECRMAAFYAGFPETVP+RTVNRQCS
Sbjct: 63  APVLKALIEKTNINPAEVGDIVVGSVLGAGSQRASECRMAAFYAGFPETVPVRTVNRQCS 122
Query: 139 SGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGIT 198
           SGLQAVADVA AIKAG YDIGI AGLESMT N ++  G VNPKV+   QA+DCLLPMGIT
Sbjct: 123 SGLQAVADVAAAIKAGFYDIGIGAGLESMTANPMAWEGSVNPKVKTMAQAQDCLLPMGIT 182
Query: 199 SENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTIS 258
           SENVAQ+F +TRQEQD                G+FKDEIIP+ TKIVDPKTG EK VTIS
Sbjct: 183 SENVAQKFSITRQEQDQAAVGSHRKTAAATAAGRFKDEIIPIKTKIVDPKTGDEKPVTIS 242
Query: 259 VDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGV 318
           VDDGIRP T++ADLAKLKP F+KDG+TTAG +SQVSDGAGAVLLMKRS+A+QKGLPILGV
Sbjct: 243 VDDGIRPGTSLADLAKLKPVFRKDGSTTAGTSSQVSDGAGAVLLMKRSIALQKGLPILGV 302
Query: 319 FR 320
           FR
Sbjct: 303 FR 304
>pdb|2WU9|A Chain A, Crystal Structure Of Peroxisomal Kat2 From Arabidopsis Thaliana Length = 442 Back     alignment and structure
>pdb|2C7Y|A Chain A, Plant Enzyme Length = 404 Back     alignment and structure
>pdb|2IIK|A Chain A, Crystal Structure Of Human Peroxisomal Acetyl-Coa Acyl Transferase 1 (Acaa1) Length = 418 Back     alignment and structure
>pdb|1AFW|A Chain A, The 1.8 Angstrom Crystal Structure Of The Dimeric Peroxisomal Thiolase Of Saccharomyces Cerevisiae Length = 393 Back     alignment and structure
>pdb|1PXT|A Chain A, The 2.8 Angstroms Structure Of Peroxisomal 3-Ketoacyl-Coa Thiolase Of Saccharomyces Cerevisiae: A Five Layered A-B-A- B-A Structure, Constructed From Two Core Domains Of Identical Topology Length = 390 Back     alignment and structure
>pdb|1M1T|A Chain A, Biosynthetic Thiolase, Q64a Mutant Length = 392 Back     alignment and structure
>pdb|2WKU|A Chain A, Biosynthetic Thiolase From Z. Ramigera. The N316h Mutant. Length = 392 Back     alignment and structure
>pdb|2WL6|A Chain A, Biosynthetic Thiolase From Z. Ramigera. The N316h-H348n Mutant. Length = 392 Back     alignment and structure
>pdb|2WKV|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The N316d Mutant With Coenzyme A. Length = 392 Back     alignment and structure
>pdb|2VU2|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex With S- Pantetheine-11-pivalate. Length = 392 Back     alignment and structure
>pdb|2WL4|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392 Back     alignment and structure
>pdb|2WL4|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392 Back     alignment and structure
>pdb|1DLU|A Chain A, Unliganded Biosynthetic Thiolase From Zoogloea Ramigera Length = 389 Back     alignment and structure
>pdb|2WL5|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348n Mutant With Coenzyme A. Length = 392 Back     alignment and structure
>pdb|2WKT|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The N316a Mutant With Coenzyme A Length = 392 Back     alignment and structure
>pdb|4E1L|A Chain A, Crystal Structure Of Acetoacetyl-Coa Thiolase (Thla2) From Clostridium Difficile Length = 395 Back     alignment and structure
>pdb|1ULQ|A Chain A, Crystal Structure Of Tt0182 From Thermus Thermophilus Hb8 Length = 401 Back     alignment and structure
>pdb|3SS6|A Chain A, Crystal Structure Of The Bacillus Anthracis Acetyl-Coa Acetyltransferase Length = 394 Back     alignment and structure
>pdb|1WDK|C Chain C, Fatty Acid Beta-Oxidation Multienzyme Complex From Pseudomonas Fragi, Form I (Native2) Length = 390 Back     alignment and structure
>pdb|1M1O|A Chain A, Crystal Structure Of Biosynthetic Thiolase, C89a Mutant, Complexed With Acetoacetyl-Coa Length = 392 Back     alignment and structure
>pdb|2WL4|D Chain D, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392 Back     alignment and structure
>pdb|1M4S|A Chain A, Biosynthetic Thiolase, Cys89 Acetylated, Unliganded Form Length = 392 Back     alignment and structure
>pdb|1QFL|A Chain A, Biosynthetic Thiolase From Zoogloea Ramigera In Complex With A Reaction Intermediate. Length = 389 Back     alignment and structure
>pdb|2WL4|B Chain B, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392 Back     alignment and structure
>pdb|2WL5|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348n Mutant With Coenzyme A. Length = 392 Back     alignment and structure
>pdb|2WKT|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The N316a Mutant With Coenzyme A. Length = 392 Back     alignment and structure
>pdb|4DD5|A Chain A, Biosynthetic Thiolase (Thla1) From Clostridium Difficile Length = 396 Back     alignment and structure
>pdb|1WL4|A Chain A, Human Cytosolic Acetoacetyl-Coa Thiolase Complexed With Coa Length = 397 Back     alignment and structure
>pdb|3GOA|A Chain A, Crystal Structure Of The Salmonella Typhimurium Fada 3- Ketoacyl-Coa Thiolase Length = 387 Back     alignment and structure
>pdb|2IB7|A Chain A, Crystallographic And Kinetic Studies Of Human Mitochondrial Acetoacetyl-Coa Thiolase (T2): The Importance Of Potassium And Chloride For Its Structure And Function Length = 395 Back     alignment and structure
>pdb|2IBU|A Chain A, Crystallographic And Kinetic Studies Of Human Mitochondrial Acetoacetyl-coa Thiolase (t2): The Importance Of Potassium And Chloride For Its Structure And Function Length = 395 Back     alignment and structure
>pdb|2F2S|A Chain A, Human Mitochondrial Acetoacetyl-Coa Thiolase Length = 406 Back     alignment and structure
>pdb|3SVK|A Chain A, Crystal Structure Of Acetyl-Coa Acetyltransferase From Mycobacterium Avium Length = 407 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query320
2wu9_A 442 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o 1e-149
2iik_A 418 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m 1e-143
1afw_A 393 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1e-131
3goa_A 387 3-ketoacyl-COA thiolase; metabolism, fatty acid, p 2e-96
1wdk_C 390 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame 5e-96
1ulq_A 401 Putative acetyl-COA acetyltransferase; structural 4e-87
3ss6_A 394 Acetyl-COA acetyltransferase; structural genomics, 5e-86
4dd5_A 396 Acetyl-COA acetyltransferase; structural genomics, 1e-84
4e1l_A 395 Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, 6e-84
2vu1_A 392 Acetyl-COA acetyltransferase; acyltransferase, PHB 4e-82
3svk_A 407 Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, 1e-81
1wl4_A 397 Acetyl-coenzyme A acetyltransferase 2; thiolase fo 1e-77
2ib8_A 395 Acetyl-COA acetyltransferase; thiolase fold, potas 2e-68
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A Length = 442 Back     alignment and structure
 Score =  426 bits (1097), Expect = e-149
 Identities = 226/296 (76%), Positives = 254/296 (85%)

Query: 25  SPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKA 84
              +      AG++A Y R   + DDVVIVAA+RT +CK+KRG FKDT  DDLLAPVL+A
Sbjct: 6   HHHVDDDDKMAGDSAAYQRTSLYGDDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRA 65

Query: 85  VIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAV 144
           +IEKT LNPSEVGDIVVGTVLAPGS RA ECRMAAFYAGFPETV +RTVNRQCSSGLQAV
Sbjct: 66  LIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVAVRTVNRQCSSGLQAV 125

Query: 145 ADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQ 204
           ADVA AIKAG YDIGI AGLESMT N ++  G VNP V+ F QA++CLLPMG+TSENVAQ
Sbjct: 126 ADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVNPAVKKFAQAQNCLLPMGVTSENVAQ 185

Query: 205 RFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIR 264
           RFGV+RQEQD AAV+SHR+AAAATA+GKFKDEIIPV TK+VDPKTG EK +T+SVDDGIR
Sbjct: 186 RFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIR 245

Query: 265 PNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320
           P TT+A L KLKP FKKDGTTTAGN+SQVSDGAGAVLLMKRS+A+QKGLP+LGVFR
Sbjct: 246 PTTTLASLGKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFR 301
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} Length = 418 Back     alignment and structure
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A Length = 393 Back     alignment and structure
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} Length = 387 Back     alignment and structure
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* Length = 390 Back     alignment and structure
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Length = 401 Back     alignment and structure
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} Length = 394 Back     alignment and structure
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} Length = 396 Back     alignment and structure
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} Length = 395 Back     alignment and structure
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... Length = 392 Back     alignment and structure
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} Length = 407 Back     alignment and structure
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A Length = 397 Back     alignment and structure
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* Length = 395 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query320
4dd5_A 396 Acetyl-COA acetyltransferase; structural genomics, 100.0
2wu9_A 442 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o 100.0
3goa_A 387 3-ketoacyl-COA thiolase; metabolism, fatty acid, p 100.0
1ulq_A 401 Putative acetyl-COA acetyltransferase; structural 100.0
3ss6_A 394 Acetyl-COA acetyltransferase; structural genomics, 100.0
2vu1_A 392 Acetyl-COA acetyltransferase; acyltransferase, PHB 100.0
2iik_A 418 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m 100.0
1wl4_A 397 Acetyl-coenzyme A acetyltransferase 2; thiolase fo 100.0
4e1l_A 395 Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, 100.0
1afw_A 393 3-ketoacetyl-COA thiolase; fatty acid metabolism; 100.0
1wdk_C 390 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame 100.0
3svk_A 407 Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, 100.0
2ib8_A 395 Acetyl-COA acetyltransferase; thiolase fold, potas 100.0
4egv_A 520 Acetyl-COA acetyltransferase; NEW SUB-family, thio 100.0
1e5m_A416 KAS II, beta ketoacyl acyl carrier protein synthas 99.65
4ddo_A451 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci 99.58
3kzu_A428 3-oxoacyl-(acyl-carrier-protein) synthase II; seat 99.58
3mqd_A428 Beta-ketoacyl synthase; ssgcid, ALS collaborative 99.57
4ewg_A412 Beta-ketoacyl synthase; ssgcid, structural genomic 99.57
3o04_A413 LMO2201 protein, beta-keto-acyl carrier protein sy 99.55
1tqy_B415 Actinorhodin polyketide putative beta-ketoacyl SY; 99.54
2ix4_A431 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke 99.54
2gqd_A437 3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli 99.53
1j3n_A408 3-oxoacyl-(acyl-carrier protein) synthase II; cond 99.52
4dfe_A333 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci 99.52
3ho9_A427 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, 99.51
2wge_A416 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta 99.51
1zow_A313 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB 99.5
1ox0_A430 Beta ketoacyl-acyl carrier protein synthase; trans 99.5
1tqy_A424 Beta-ketoacyl synthase/acyl transferase; alpha-bet 99.5
2gp6_A434 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol 99.49
2iwz_A438 3-oxoacyl-[acyl-carrier-protein] synthase; mitocho 99.49
3il3_A323 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 99.48
4efi_A354 3-oxoacyl-(acyl-carrier protein) synthase; structu 99.48
2vba_A406 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop 99.46
3gwa_A365 3-oxoacyl-(acyl-carrier-protein) synthase III; str 99.45
3s21_A345 3-oxoacyl-[ACP] synthase III; non-decarboxylative 99.45
1u6e_A335 3-oxoacyl-[acyl-carrier-protein] synthase III; tra 99.45
3h78_A359 PQS biosynthetic enzyme; PQSD, anthranilic acid, a 99.43
1hnj_A317 Beta-ketoacyl-acyl carrier protein synthase III; F 99.43
2hg4_A 917 DEBS, 6-deoxyerythronolide B synthase; ketosynthas 99.42
1mzj_A339 Beta-ketoacylsynthase III; beta-ketosynthase, arom 99.42
1ub7_A322 3-oxoacyl-[acyl-carrier protein] synthase; fatty a 99.41
3il6_A321 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 99.41
2ebd_A309 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 99.4
2qo3_A 915 Eryaii erythromycin polyketide synthase modules 3; 99.38
4ewp_A350 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans 99.36
3s3l_A357 CERJ; acyltransferase, FABH homologue, KS III homo 99.35
3lma_A347 Stage V sporulation protein AD (spovad); NESG, str 99.34
2h84_A374 Steely1; thiolase-fold, type III polyketide syntha 99.33
3led_A392 3-oxoacyl-acyl carrier protein synthase III; struc 99.31
1i88_A389 CHS2, chalcone synthase 2; polyketide synthase, tr 99.3
2p0u_A413 Stilbenecarboxylate synthase 2; polyketide synthas 99.29
3awk_A402 Chalcone synthase-like polyketide synthase; type I 99.29
3ov2_A393 Curcumin synthase; type III polyketide synthase, t 99.29
3a5r_A387 Benzalacetone synthase; chalcone synthase, type II 99.29
3v7i_A413 Putative polyketide synthase; type III polyketide 99.28
2d3m_A406 Pentaketide chromone synthase; chalcone synthase, 99.28
3oit_A387 OS07G0271500 protein; type III polyketide synthase 99.28
1xes_A413 Dihydropinosylvin synthase; native structure, tran 99.28
2x3e_A331 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, 99.27
1u0m_A382 Putative polyketide synthase; type III polyketide 99.27
1ted_A393 PKS18; thiolase fold, substrate binding tunnel, tr 99.25
1ee0_A402 2-pyrone synthase; polyketide synthase, thiolase f 99.25
2f82_A 450 HMG-COA synthase; HMGS1, transferase; 2.10A {Brass 99.22
3euo_A379 Type III pentaketide synthase; alpha helix, acyltr 99.22
2v4w_A 460 Hydroxymethylglutaryl-COA synthase, mitochondrial; 99.19
2uv9_A 1878 Fatty acid synthase alpha subunits; fungal, dehydr 99.16
3e1h_A 465 PKSIIINC, putative uncharacterized protein; resorc 99.16
3zen_D 3089 Fatty acid synthase; transferase, mycolic acid bio 99.15
3hhd_A 965 Fatty acid synthase; transferase, multienzyme, meg 99.14
2uv8_A 1887 Fatty acid synthase subunit alpha (FAS2); fatty ac 99.12
2pff_A 1688 Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl 99.1
3v4n_A388 HMG-COA synthase; hydroxymethylglutaryl-COA syntha 99.1
2p8u_A 478 Hydroxymethylglutaryl-COA synthase, cytoplasmic; h 99.1
3sqz_A425 Putative hydroxymethylglutaryl-COA synthase; thiol 99.07
3tsy_A979 Fusion protein 4-coumarate--COA ligase 1, resvera 99.05
1xpm_A 396 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s 99.03
2vz8_A 2512 Fatty acid synthase; transferase, phosphopantethei 98.7
2wya_A 460 Hydroxymethylglutaryl-COA synthase, mitochondrial; 98.7
3lma_A347 Stage V sporulation protein AD (spovad); NESG, str 90.42
3gwa_A365 3-oxoacyl-(acyl-carrier-protein) synthase III; str 89.91
3il3_A323 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 87.67
4dfe_A333 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci 87.33
2x3e_A331 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, 86.7
1zow_A313 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB 86.07
1hnj_A317 Beta-ketoacyl-acyl carrier protein synthase III; F 85.96
3s21_A345 3-oxoacyl-[ACP] synthase III; non-decarboxylative 85.81
1mzj_A339 Beta-ketoacylsynthase III; beta-ketosynthase, arom 84.78
1u6e_A335 3-oxoacyl-[acyl-carrier-protein] synthase III; tra 84.09
2ebd_A309 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 82.55
1ted_A393 PKS18; thiolase fold, substrate binding tunnel, tr 82.27
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} Back     alignment and structure
Probab=100.00  E-value=5.4e-50  Score=389.32  Aligned_cols=266  Identities=36%  Similarity=0.509  Sum_probs=231.1

Q ss_pred             CCCCceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCC
Q 020887           46 AFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFP  125 (320)
Q Consensus        46 ~~~~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~  125 (320)
                      |+|++|+|||+++|||++ +++.+++.+..+|+.+|+++||+|+|+++++||.+++|+..+... .+++++.++..+|++
T Consensus         4 m~m~~v~Ivg~~rT~~~~-~~~~~~~~~~~~L~~~A~~~AL~~agl~~~dId~vi~g~~~~~~~-~~~~a~~v~~~lGl~   81 (396)
T 4dd5_A            4 MNMREVVIASAARTAVGS-FGGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGL-GQNIARQIALGAGIP   81 (396)
T ss_dssp             --CCCEEEEEEEECCCEE-TTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSCCTTS-CSCHHHHHHHHTTCC
T ss_pred             CcCCcEEEEEcccCCeee-cCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCCCC-CchHHHHHHHHcCCC
Confidence            456899999999999998 467788899999999999999999999999999999998876553 578899999999997


Q ss_pred             CCCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeeccccccccccc-----Ccc------Chhhhh-hhccccCCC
Q 020887          126 ETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVV-----GQV------NPKVEI-FTQARDCLL  193 (320)
Q Consensus       126 ~~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~-----~~~------~~~~~~-~~~~~~~~~  193 (320)
                      ..+|+++++++|+|++.+|..|+++|++|.+|++||+|+|.+++.|+...     ..+      +..+.+ +..++ ...
T Consensus        82 ~~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  160 (396)
T 4dd5_A           82 VEKPAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIF-NNY  160 (396)
T ss_dssp             TTSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEESTTCCEECTTTTTCCCSSCCCCEEHHHHHTSEETT-TTE
T ss_pred             CCceEEEeccccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccCCcccccccccccccCcccccchhhhccccccc-ccc
Confidence            67999999999999999999999999999999999999999998876421     111      111111 11111 235


Q ss_pred             chHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHHh
Q 020887          194 PMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLA  273 (320)
Q Consensus       194 ~~g~~A~~~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~  273 (320)
                      .|+++|++||++||+|||++|+|+++||+||.+||++|+|++||+||+++.++      +..+++.|+.+|+++|+|+|+
T Consensus       161 ~~~~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~f~~ei~pv~~~~~~------~~~~~~~d~~~r~~~t~e~l~  234 (396)
T 4dd5_A          161 HMGITAENIAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRK------GDTVVDKDEYIKPGTTMEKLA  234 (396)
T ss_dssp             EHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEC----------CEEECSCSCCCTTCCHHHHH
T ss_pred             hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCcccceeeeeeccCC------CceeecCcccccCCCCHHHHh
Confidence            79999999999999999999999999999999999999999999999987422      235789999999999999999


Q ss_pred             cCCCcccCCCcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887          274 KLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR  320 (320)
Q Consensus       274 ~~~~i~~~~gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~  320 (320)
                      ++||+|+|+||+|++|||+++|||+++||+|++.|++++++|+++|+
T Consensus       235 ~~~~v~~p~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~I~  281 (396)
T 4dd5_A          235 KLRPAFKKDGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIV  281 (396)
T ss_dssp             HCCBSSSTTCSCBTTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEE
T ss_pred             hCCCccCCCCCeecCCCCCcCcceeEEEEeeHHHHHHCCCCceEEEE
Confidence            99999998899999999999999999999999999999999999884
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A Back     alignment and structure
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} Back     alignment and structure
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} Back     alignment and structure
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... Back     alignment and structure
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} Back     alignment and structure
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A Back     alignment and structure
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} Back     alignment and structure
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A Back     alignment and structure
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* Back     alignment and structure
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} Back     alignment and structure
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* Back     alignment and structure
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis} Back     alignment and structure
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* Back     alignment and structure
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A Back     alignment and structure
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* Back     alignment and structure
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} Back     alignment and structure
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} Back     alignment and structure
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A Back     alignment and structure
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} Back     alignment and structure
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} Back     alignment and structure
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A Back     alignment and structure
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* Back     alignment and structure
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A Back     alignment and structure
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A Back     alignment and structure
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} Back     alignment and structure
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A Back     alignment and structure
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} Back     alignment and structure
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} Back     alignment and structure
>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... Back     alignment and structure
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A Back     alignment and structure
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A Back     alignment and structure
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A Back     alignment and structure
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* Back     alignment and structure
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* Back     alignment and structure
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Back     alignment and structure
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* Back     alignment and structure
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} Back     alignment and structure
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Back     alignment and structure
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} Back     alignment and structure
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* Back     alignment and structure
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A Back     alignment and structure
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} Back     alignment and structure
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} Back     alignment and structure
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A Back     alignment and structure
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A Back     alignment and structure
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} Back     alignment and structure
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A Back     alignment and structure
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A Back     alignment and structure
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} Back     alignment and structure
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A Back     alignment and structure
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* Back     alignment and structure
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Back     alignment and structure
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} Back     alignment and structure
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* Back     alignment and structure
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Back     alignment and structure
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Back     alignment and structure
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Back     alignment and structure
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* Back     alignment and structure
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Back     alignment and structure
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* Back     alignment and structure
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Back     alignment and structure
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens} Back     alignment and structure
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A Back     alignment and structure
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A Back     alignment and structure
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} Back     alignment and structure
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} Back     alignment and structure
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} Back     alignment and structure
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A Back     alignment and structure
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* Back     alignment and structure
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A Back     alignment and structure
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A Back     alignment and structure
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} Back     alignment and structure
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 320
d1m3ka1268 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea 5e-66
d1ulqa1273 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {T 1e-61
d1afwa1269 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Sacch 4e-55
d1wdkc1262 c.95.1.1 (C:2-263) Fatty oxidation complex beta su 2e-51
>d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Length = 268 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Biosynthetic thiolase
species: Zoogloea ramigera [TaxId: 350]

 Score =  206 bits (525), Expect = 5e-66
 Identities = 100/274 (36%), Positives = 146/274 (53%), Gaps = 18/274 (6%)

Query: 49  DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPG 108
             +VI +A RTA+     G F +T A +L A V+ AV+E+  +   EV ++++G VL  G
Sbjct: 3   PSIVIASAARTAVGSFN-GAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAG 61

Query: 109 STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168
                  R AA  AG P+      +N+   SGL+AVA     I  G   I +A G+ESM+
Sbjct: 62  EG-QNPARQAAMKAGVPQEATAWGMNQLAGSGLRAVALGMQQIATGDASIIVAGGMESMS 120

Query: 169 VNSISVVGQVNPKVEIFTQARDCL----------LPMGITSENVAQRFGVTRQEQDLAAV 218
           +       +   K+  F      +            MG T+ENVA+++ ++R EQD  AV
Sbjct: 121 MAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAV 180

Query: 219 ESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPA 278
            S  +A AA   G+FKDEI+P   K      G +  +T+  D+ IR   T+  +AKL+PA
Sbjct: 181 ASQNKAEAAQKDGRFKDEIVPFIVK------GRKGDITVDADEYIRHGATLDSMAKLRPA 234

Query: 279 FKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKG 312
           F K+GT TAGNAS ++DGA A LLM  + A ++G
Sbjct: 235 FDKEGTVTAGNASGLNDGAAAALLMSEAEASRRG 268
>d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Length = 273 Back     information, alignment and structure
>d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 269 Back     information, alignment and structure
>d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Length = 262 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query320
d1m3ka1268 Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 100.0
d1ulqa1273 Beta-ketoadipyl CoA thiolase {Thermus thermophilus 100.0
d1wdkc1262 Fatty oxidation complex beta subunit (3-ketoacyl-C 100.0
d1afwa1269 Thiolase {Baker's yeast (Saccharomyces cerevisiae) 100.0
d1hnja1174 Ketoacyl-ACP synthase III (FabH) {Escherichia coli 99.34
d1u6ea1184 Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu 99.34
d1ub7a1172 Ketoacyl-ACP synthase III (FabH) {Thermus thermoph 99.29
d1mzja1181 Priming beta-ketosynthase from the r1128 polyketid 99.29
d1u0ma1200 Putative polyketide synthase SCO1206 {Streptomyces 99.18
d1tqyb1208 Actinorhodin polyketide putative beta-ketoacyl syn 99.13
d1j3na1249 Beta-ketoacyl-ACP synthase II {Thermus thermophilu 99.13
d1tqya1216 Actinorhodin polyketide putative beta-ketoacyl syn 99.13
d2gfva1250 Beta-ketoacyl-ACP synthase II {Escherichia coli [T 99.11
d1ox0a1256 Beta-ketoacyl-ACP synthase II {Streptococcus pneum 99.05
d1teda_372 Polyketide synthase PKS18 {Mycobacterium tuberculo 99.0
d1bi5a1235 Chalcone synthase {Alfalfa (Medicago sativa) [TaxI 98.99
d1e5ma1250 Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ 98.94
d1xpma1166 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap 98.85
d2vbaa1253 Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta 98.59
d2ix4a1270 Beta-ketoacyl-ACP synthase II {Thale cress (Arabid 98.47
d1u6ea2148 Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu 93.75
d1hnja2143 Ketoacyl-ACP synthase III (FabH) {Escherichia coli 93.28
d1ub7a2149 Ketoacyl-ACP synthase III (FabH) {Thermus thermoph 92.37
d1mzja2153 Priming beta-ketosynthase from the r1128 polyketid 91.16
>d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Biosynthetic thiolase
species: Zoogloea ramigera [TaxId: 350]

Probab=100.00  E-value=6.6e-54  Score=394.36  Aligned_cols=257  Identities=38%  Similarity=0.517  Sum_probs=229.7

Q ss_pred             CCceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCC
Q 020887           48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET  127 (320)
Q Consensus        48 ~~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~  127 (320)
                      ..+||||++.||||+| ++|.++++++.+|+..+++++|+++||++++||.+++|++.+.+. +.++++.+++..|+|..
T Consensus         2 ~~~V~Iv~~~RTP~g~-~~G~l~~~~~~dL~~~~~~~~l~~~~i~~~~Id~vi~G~~~~~~~-~~n~ar~~al~aglp~~   79 (268)
T d1m3ka1           2 TPSIVIASAARTAVGS-FNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGE-GQNPARQAAMKAGVPQE   79 (268)
T ss_dssp             CCCEEEEEEEECCCEE-TTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTS-CSCHHHHHHHHTTCCTT
T ss_pred             CCCEEEEeceeCcccC-CCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCcEEEEeeccccCc-chHHHhHHHHHhCCccc
Confidence            5689999999999998 689999999999999999999999999999999999999987664 78999999999999988


Q ss_pred             CCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccccccccccCc----c------ChhhhhhhccccCCCchHH
Q 020887          128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ----V------NPKVEIFTQARDCLLPMGI  197 (320)
Q Consensus       128 ~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~~~----~------~~~~~~~~~~~~~~~~~g~  197 (320)
                      +|+++|++.|+||++||..|+++|++|.+|++|++|+|+||+.|+.....    .      +..+.+..........|+.
T Consensus        80 vpa~tv~~~C~Sg~~Ai~~Aa~~I~~G~~dvvlagG~EsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~Mg~  159 (268)
T d1m3ka1          80 ATAWGMNQLAGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGT  159 (268)
T ss_dssp             SEEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEEECCSSCCSSSCEEEEEHHHHHHTBCTTTCSBHHH
T ss_pred             ccceeecccCcccchHHHHHHHHHhCCCceEEeeccccccccCchhhhcccCCcCCCcccccccccccCcCcccCCcHHH
Confidence            99999999999999999999999999999999999999999998753211    1      1111111112223468999


Q ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHHhcCCC
Q 020887          198 TSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKP  277 (320)
Q Consensus       198 ~A~~~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~~~~~  277 (320)
                      +|+.++++||||||++|+||++||++|..++++|+|++||+|++.+.+      ++..+++.||++|+++|+|.|.+++|
T Consensus       160 ~Ae~~A~~~gisRe~~D~~A~~S~~ra~~A~~~g~f~~ei~p~~~~~~------~g~~~v~~d~~~r~~tt~e~L~~L~p  233 (268)
T d1m3ka1         160 TAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGR------KGDITVDADEYIRHGATLDSMAKLRP  233 (268)
T ss_dssp             HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCT------TCCEEECSCSSCCTTCCHHHHHTCCB
T ss_pred             HHHHHHHHHCcCHHHHHHHHHHHHHHhhhHHHcCCchhhccccccCCC------CCCeEEeCCCCCCCCCCHHHHcCCCC
Confidence            999999999999999999999999999999999999999999987632      23468999999999999999999999


Q ss_pred             cccCCCcccCCCCCCCCCcceEEEEcCHHHHHhcC
Q 020887          278 AFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKG  312 (320)
Q Consensus       278 i~~~~gplt~~d~s~~sDGAaAvvLaSee~A~~~~  312 (320)
                      +|+++|.+|++|||+++|||+|+||+|+++|+++|
T Consensus       234 ~f~~~GtvTagnss~~~DGAAa~ll~se~~a~~~G  268 (268)
T d1m3ka1         234 AFDKEGTVTAGNASGLNDGAAAALLMSEAEASRRG  268 (268)
T ss_dssp             SSCTTCCCBSSSBCCCEEEEEEEEEEEHHHHHHHT
T ss_pred             CcCCCCcEEChhhChHHHHHHHHHHhhHHHHHhcC
Confidence            99989999999999999999999999999999986
>d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Back     information, alignment and structure
>d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Back     information, alignment and structure
>d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure
>d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Back     information, alignment and structure
>d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Back     information, alignment and structure
>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Back     information, alignment and structure